isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
ENSMUSG00000000001.5_0	chr3	-	3247	9	FSM	ENSMUSG00000000001.5	ENSMUST00000000001.5	3262	9	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACTTTTATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	108053448	108014596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108016633_108016718_108016929_108019250_108019405_108019788_108019919_108023078_108023208_108025616_108025775_108030857_108031000_108031110_108031154_108053203
ENSMUSG00000000028.16_0	chr16	-	2124	20	FSM	ENSMUSG00000000028.16	ENSMUST00000000028.14	2143	20	13	6	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	18630709	18599202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18627481_18627620_18629138_18629232_18630054_18630115_18630264_18630460_18630553
ENSMUSG00000000028.16_6	chr16	-	1739	18	FSM	ENSMUSG00000000028.16	ENSMUST00000096990.10	1747	18	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTCTGGGTCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	18630368	18599202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18599324_18600645_18600713_18603555_18603633_18603822_18603942_18605518_18605603_18605679_18605819_18611927_18612090_18613511_18613611_18613844_18613977_18614574_18614695_18616098_18616150_18617425_18617488_18620550_18620600_18624131_18624188_18626029_18626174_18629138_18629232_18630054_18630115_18630264
ENSMUSG00000000031.17_1	chr7	-	2268	5	FSM	ENSMUSG00000000031.17	ENSMUST00000136359.8	2286	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTGGTCTCGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	142131869	142129272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142129852_142129939_142130068_142130145_142130268_142130349_142130485_142130565
ENSMUSG00000000049.12_0	chr11	+	1185	8	FSM	ENSMUSG00000000049.12	ENSMUST00000000049.6	1190	8	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTACAGTGTGACTCG	NA	NA	NA	NA	NA	NA	NA	NA	108286118	108305217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_108286234_108286641_108286819_108288124_108288222_108295636_108295714_108298116_108298306_108299956_108300137_108302820_108303019_108305065
ENSMUSG00000000056.8_0	chr11	+	1308	10	FSM	ENSMUSG00000000056.8	ENST00000345415.11	1318	10	8	2	-1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAGCCTGAAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	121128077	121143746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121128178_121129244_121129336_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_10	chr11	+	4381	11	FSM	ENSMUSG00000000056.8	ENSMUST00000103015.4	4395	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTTATGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	121128085	121146675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121128178_121129244_121129344_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000056.8_28	chr11	+	1347	10	FSM	ENSMUSG00000000056.8	ENST00000390006.8	1354	10	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGCCTGAAGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121129250	121143747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121129336_121133326_121133471_121135419_121135553_121135761_121135897_121136163_121136283_121137751_121137882_121139954_121140019_121141118_121141257_121141585_121141744_121143506
ENSMUSG00000000058.7_0	chr6	+	2714	3	FSM	ENSMUSG00000000058.7	ENSMUST00000000058.7	2733	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTCAAATAACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	17281196	17289108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17281510_17281893_17282082_17286895
ENSMUSG00000000058.7_1	chr6	+	951	2	FSM	ENSMUSG00000000058.7	ENSMUST00000115459.2	974	2	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACAAGGGGATAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	17281336	17282671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17281510_17281893
ENSMUSG00000000078.8_0	chr13	+	4205	3	FSM	ENSMUSG00000000078.8	ENST00000542957.1	4221	3	9	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGTGTAATTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	5911473	5920490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_5911842_5914766_5915344_5917230
ENSMUSG00000000078.8_3	chr13	+	4207	4	FSM	ENSMUSG00000000078.8	ENSMUST00000000080.8	4225	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCATCTGGAGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	5911491	5920386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_5911842_5914766_5915344_5916637_5916762_5917230
ENSMUSG00000000085.17_1	chr4	+	3324	17	FSM	ENSMUSG00000000085.17	ENSMUST00000000087.13	3353	17	13	16	13	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAATACAAATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	120262516	120387365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_120262654_120304229_120304359_120310440_120310504_120310948_120310973_120319209_120319353_120320271_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120382194_120382261_120385352_120385496_120386330
ENSMUSG00000000085.17_12	chr4	+	2753	11	FSM	ENSMUSG00000000085.17	ENST00000397171.6	2776	11	6	17	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAACCAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	120320274	120387359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_120320343_120325431_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000085.17_15	chr4	+	2681	10	FSM	ENSMUSG00000000085.17	ENST00000361705.7	2705	10	7	17	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAACCAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	120325435	120387359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_120325667_120335198_120335288_120340786_120341031_120362480_120362711_120365282_120365410_120372270_120372472_120374082_120374275_120379651_120379847_120385352_120385496_120386330
ENSMUSG00000000088.8_0	chr9	+	628	5	FSM	ENSMUSG00000000088.8	ENSMUST00000000090.8	645	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAATTAGGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57428571	57439702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57428699_57436238_57436356_57437523_57437646_57438951_57439076_57439564
ENSMUSG00000000088.8_7	chr9	+	235	2	FSM	ENSMUSG00000000088.8	ENST00000562233.5	251	2	8	8	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAATTAGGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57436258	57439702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57436356_57439564
ENSMUSG00000000126.12_0	chr11	+	3293	4	FSM	ENSMUSG00000000126.12	ENSMUST00000108783.4	3318	4	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACAACCTAAGTCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	59197769	59224367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59197894_59218389_59218647_59219327_59219591_59221718
ENSMUSG00000000127.16_1	chr17	+	3176	19	FSM	ENSMUSG00000000127.16	ENST00000281092.9	3187	19	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCAGAACAAGCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	64185000	64446523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_64185138_64203012_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288477_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000127.16_14	chr17	+	2957	18	FSM	ENSMUSG00000000127.16	ENSMUST00000000129.14	2973	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCGAGATTATATCTATA	NA	NA	NA	NA	NA	NA	NA	NA	64203024	64446450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_64203279_64214275_64214450_64218459_64218560_64228607_64228792_64230356_64230495_64231053_64231174_64241284_64241408_64248285_64248476_64280059_64280153_64288474_64288682_64298588_64298712_64336284_64336342_64342441_64342558_64344564_64344660_64385846_64385971_64440435_64440591_64444704_64444828_64445869
ENSMUSG00000000131.16_0	chr7	-	4527	24	FSM	ENSMUSG00000000131.16	ENSMUST00000168189.8	4552	24	15	10	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAACACTAGTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	125799658	125700896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728813_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ENSMUSG00000000131.16_1	chr7	-	4410	24	FSM	ENSMUSG00000000131.16	ENSMUST00000009344.16	4455	24	36	9	36	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAACACTAGTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	125799544	125700896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125701563_125703875_125704107_125704272_125704372_125706242_125706405_125707623_125707796_125707957_125708073_125709085_125709242_125711923_125712114_125712828_125712976_125714979_125715125_125719528_125719622_125723543_125723704_125727398_125727469_125728719_125728810_125730197_125730307_125739736_125739847_125748405_125748533_125751997_125752452_125755895_125755974_125760032_125760193_125768300_125768499_125770201_125770315_125773329_125773421_125799070
ENSMUSG00000000134.18_0	chrX	+	3270	10	FSM	ENSMUSG00000000134.18	ENSMUST00000077680.10	3277	10	6	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7628902	7641440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_11	chrX	+	2942	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115677.8	2943	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTCTCCCGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	7630197	7641439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7630268_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_15	chrX	+	2981	10	FSM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCATTGAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	7630282	7641431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7630400_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_16	chrX	+	2867	9	ISM	ENSMUSG00000000134.18	ENSMUST00000101695.9	2989	10	1472	-4	1426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7631751	7641440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_4	chrX	+	3154	9	FSM	ENSMUSG00000000134.18	ENSMUST00000079542.13	3163	9	2	7	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGGCATTGAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	7628904	7641431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7629300_7631745_7631860_7632793_7633095_7633677_7633924_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_6	chrX	+	3228	10	FSM	ENSMUSG00000000134.18	ENSMUST00000115679.8	3239	10	11	0	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTCTCCCGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7628925	7641440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7629300_7631745_7631860_7632812_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000134.18_8	chrX	+	3388	10	FSM	ENSMUSG00000000134.18	ENSMUST00000137467.8	3390	10	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGAGTCTCCCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	7628933	7641436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7629453_7631745_7631860_7632793_7633095_7633677_7633924_7634131_7634237_7635668_7635787_7637012_7637070_7637233_7637310_7638687_7638836_7639732
ENSMUSG00000000148.18_0	chr5	+	3328	14	FSM	ENSMUSG00000000148.18	ENSMUST00000041588.13	3333	14	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	140690767	140705131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140690831_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUSG00000000148.18_4	chr5	+	3392	14	FSM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	36	3	36	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	140690856	140705131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140690984_140691707_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUSG00000000148.18_5	chr5	+	3262	13	ISM	ENSMUSG00000000148.18	ENSMUST00000100505.3	3431	14	890	3	890	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTGTCTTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	140691710	140705131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_140691852_140695892_140696048_140697260_140697409_140698259_140698633_140698807_140698928_140700047_140700140_140700321_140700441_140700514_140700702_140700893_140700968_140702446_140702550_140702683_140702783_140702898_140703075_140703656
ENSMUSG00000000149.11_0	chr5	-	3387	4	FSM	ENSMUSG00000000149.11	ENSMUST00000000153.9	3416	4	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAACCAGTCTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	140816167	140744172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140746874_140748344_140748396_140771151_140771368_140815748
ENSMUSG00000000154.17_0	chr7	+	1521	11	FSM	ENSMUSG00000000154.17	ENSMUST00000052348.12	1525	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTCTTTGGGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	143027472	143053067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_143027575_143029806_143030043_143033021_143033120_143033456_143033618_143034126_143034260_143044548_143044662_143045482_143045591_143046578_143046680_143050687_143050790_143051046_143051168_143052821
ENSMUSG00000000159.17_0	chr16	+	1835	9	FSM	ENSMUSG00000000159.17	ENSMUST00000000163.13	1851	9	0	16	0	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAATGAAAAGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	96162993	96205212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_96163045_96165206_96165285_96174029_96174348_96179284_96179585_96187685_96187827_96192219_96192245_96197568_96197670_96199090_96199165_96204465
ENSMUSG00000000159.17_1	chr16	+	1802	8	ISM	ENSMUSG00000000159.17	ENSMUST00000000163.13	1851	9	2211	0	2211	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCTTGTATTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	96165204	96205228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_96165285_96174029_96174348_96179284_96179585_96187685_96187827_96192219_96192245_96197568_96197670_96199090_96199165_96204465
ENSMUSG00000000167.15_0	chr9	+	1236	6	FSM	ENSMUSG00000000167.15	ENSMUST00000000171.15	1256	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACAATTTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	50528633	50536290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50528899_50529745_50529950_50531054_50531179_50532244_50532491_50532920_50533187_50536159
ENSMUSG00000000168.11_0	chr9	-	4017	14	FSM	ENSMUSG00000000168.11	ENSMUST00000034567.4	4035	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATGTTTGATCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	50571068	50545938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_10	chr9	-	2245	12	FSM	ENSMUSG00000000168.11	ENST00000393051.5	2268	12	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAACATGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	50570780	50547107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_11	chr9	-	2474	13	FSM	ENSMUSG00000000168.11	ENST00000681339.1	2495	13	11	10	-9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAACATGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	50570802	50547107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570090_50570490
ENSMUSG00000000168.11_13	chr9	-	2571	14	FSM	ENSMUSG00000000168.11	ENST00000679878.1	2588	14	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAGAACATGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	50570824	50547107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50547855_50548755_50548893_50549220_50549384_50551523_50551640_50555325_50555434_50555740_50555834_50556338_50556407_50560931_50561074_50562050_50562239_50564921_50565049_50569144_50569299_50569464_50569590_50569987_50570057_50570490
ENSMUSG00000000171.6_0	chr9	-	1219	4	FSM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATATTATATAATG	NA	NA	NA	NA	NA	NA	NA	NA	50515109	50507665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50508551_50510060_50510206_50511847_50511965_50515037
ENSMUSG00000000171.6_2	chr9	-	1147	3	ISM	ENSMUSG00000000171.6	ENSMUST00000000175.6	1231	4	3148	9	3148	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATATTATATAATG	NA	NA	NA	NA	NA	NA	NA	NA	50511964	50507665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_50508551_50510060_50510206_50511847
ENSMUSG00000000183.7_0	chr6	+	4590	3	FSM	ENSMUSG00000000183.7	ENSMUST00000000187.7	4657	3	52	15	52	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGACAACAAATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126992600	127005135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_126992895_126993956_126994061_127000943
ENSMUSG00000000184.13_0	chr6	-	6312	5	FSM	ENSMUSG00000000184.13	ENSMUST00000000188.12	6330	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACAATGTCTGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	127128013	127102132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_127107451_127116065_127116215_127122985_127123146_127125626_127125843_127127544
ENSMUSG00000000194.14_0	chr2	+	6118	18	FSM	ENSMUSG00000000194.14	ENSMUST00000056433.7	6134	18	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAGTAGCCCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	31042341	31108785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31042494_31057032_31057156_31058175_31058227_31058808_31058892_31061953_31062094_31064213_31064252_31066909_31066967_31067796_31067908_31068265_31068400_31073591_31073668_31074809_31074884_31075500_31075619_31078694_31078826_31081858_31081903_31097690_31097741_31099078_31099163_31100460_31100583_31104255
ENSMUSG00000000202.10_0	chr11	-	1691	3	FSM	ENSMUSG00000000202.10	ENSMUST00000000206.4	1717	3	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCAACTCCCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114686707	114682052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_114683349_114684675_114684953_114686589
ENSMUSG00000000215.12_0	chr7	-	466	3	FSM	ENSMUSG00000000215.12	ENSMUST00000105934.8	480	3	3	11	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCACAAGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	142253244	142232403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142232596_142233083_142233285_142253171
ENSMUSG00000000215.12_1	chr7	-	398	2	FSM	ENSMUSG00000000215.12	ENSMUST00000105933.8	552	2	150	4	-15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAAGTTGTGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	142233285	142232399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142232596_142233083
ENSMUSG00000000223.14_0	chrX	+	7120	23	FSM	ENSMUSG00000000223.14	ENSMUST00000153424.8	7135	23	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGTCCTCTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133305390	133357321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133305704_133324524_133324703_133329062_133329227_133331223_133331381_133332279_133332401_133334539_133334809_133335173_133335321_133335771_133335851_133337769_133337831_133338158_133338221_133339567_133339643_133340668_133340871_133341083_133341170_133341977_133342136_133342410_133342578_133344400_133344513_133346963_133347101_133347376_133347443_133347710_133347777_133348596_133348741_133350400_133350639_133352916_133353038_133353324
ENSMUSG00000000223.14_6	chrX	+	4138	24	FSM	ENSMUSG00000000223.14	ENSMUST00000113224.9	4147	24	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGTGTGAGAAAGGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	133305537	133354365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133305704_133324524_133324703_133327805_133327927_133329062_133329227_133331223_133331381_133332279_133332401_133334539_133334809_133335173_133335321_133335771_133335851_133337769_133337831_133338158_133338221_133339567_133339643_133340668_133340871_133341083_133341170_133341977_133342136_133342410_133342578_133344400_133344513_133346963_133347101_133347376_133347443_133347710_133347777_133348596_133348741_133350400_133350639_133352916_133353038_133353324
ENSMUSG00000000244.18_0	chr7	+	1564	9	FSM	ENSMUSG00000000244.18	ENSMUST00000009396.13	1582	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAACTTGGGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	142558792	142573215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142558913_142559640_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
ENSMUSG00000000244.18_1	chr7	+	1862	8	FSM	ENSMUSG00000000244.18	ENSMUST00000075172.12	1876	8	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCAGACCCCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	142559388	142573381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142570937_142571022_142571315_142571411_142572427
ENSMUSG00000000244.18_2	chr7	+	1561	7	FSM	ENSMUSG00000000244.18	ENSMUST00000082008.12	1587	7	13	13	-1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAATTGAAACTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	142559434	142573210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142559756_142560644_142560743_142564770_142564846_142568695_142568798_142569317_142569405_142571315_142571411_142572427
ENSMUSG00000000248.17_0	chr6	+	2381	6	FSM	ENSMUSG00000000248.17	ENSMUST00000142388.8	2404	6	0	23	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAACCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	128948122	128961647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_128948270_128956358_128956442_128957146_128957273_128958167_128958347_128958824_128958932_128959908
ENSMUSG00000000253.14_0	chr13	+	1561	9	FSM	ENSMUSG00000000253.14	ENSMUST00000000260.13	1580	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGACTGAGTGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45660931	45699851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_45661220_45667870_45667991_45670474_45670559_45674327_45674502_45683183_45683266_45685769_45685877_45692500_45692544_45695954_45696115_45699348
ENSMUSG00000000266.12_0	chrX	+	3795	10	NIC	ENSMUSG00000000266.12	novel	3817	10	NA	NA	12	-10	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGCACTGAAATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139565468	139665662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_+_139566028_139578744_139579461_139593815_139593912_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661937_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_5	chrX	+	3793	10	NIC	ENSMUSG00000000266.12	novel	3817	10	NA	NA	16	-12	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAGCACTGAAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	139565472	139665660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_+_139566028_139578744_139579461_139593815_139593912_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651809_139661933_139662096_139663663_139663872_139664227
ENSMUSG00000000266.12_8	chrX	+	6265	10	NIC	ENSMUSG00000000266.12	novel	3817	10	NA	NA	1	-5	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTTGGTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	139565705	139668459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_+_139566028_139578744_139579461_139593815_139593912_139637183_139637292_139639068_139639218_139650320_139650449_139651570_139651715_139661933_139662096_139663663_139663872_139664227
ENSMUSG00000000275.17_0	chr11	+	5571	9	FSM	ENSMUSG00000000275.17	ENSMUST00000107896.10	5590	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGCGACATTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88890213	88911112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88905992_88906017_88906358_88906458_88906544_88906644_88907020
ENSMUSG00000000275.17_1	chr11	+	5548	8	FSM	ENSMUSG00000000275.17	ENSMUST00000000284.7	5566	8	6	12	6	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATAAGTGCGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	88890207	88911107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88890909_88895554_88895651_88899944_88900179_88901630_88901800_88904301_88904365_88906358_88906458_88906544_88906644_88907020
ENSMUSG00000000276.12_0	chr11	-	8323	12	FSM	ENSMUSG00000000276.12	ENSMUST00000107894.8	8347	12	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTTAAAAAGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	88957661	88926013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756_88951858_88957223
ENSMUSG00000000276.12_2	chr11	-	5182	11	FSM	ENSMUSG00000000276.12	ENSMUST00000000285.9	5208	11	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAACAGTCAGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88951557	88928416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88931738_88932273_88932386_88932987_88933116_88935065_88935138_88939714_88939829_88940674_88940727_88941144_88941303_88941494_88941639_88943252_88943373_88946183_88946344_88950756
ENSMUSG00000000278.11_0	chr11	-	2078	13	FSM	ENSMUSG00000000278.11	ENSMUST00000000287.9	2097	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAATGACGGCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	88846280	88814853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88815551_88819990_88820155_88821033_88821172_88824273_88824388_88825403_88825498_88826648_88826778_88827839_88827878_88832109_88832183_88834622_88834698_88835200_88835357_88837970_88838061_88843231_88843381_88846119
ENSMUSG00000000282.13_0	chr11	+	4562	6	FSM	ENSMUSG00000000282.13	ENSMUST00000000291.9	4590	6	26	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGCATCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	74721771	74736549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74722228_74727188_74727775_74728256_74728299_74728437_74728550_74732986_74733180_74733376
ENSMUSG00000000282.13_1	chr11	+	592	2	FSM	ENSMUSG00000000282.13	ENST00000575394.1	602	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGCAGACAGGCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74721775	74733126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74722228_74732986
ENSMUSG00000000290.14_0	chr10	+	2111	13	FSM	ENSMUSG00000000290.14	ENST00000355153.8	2125	13	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGCATGAGTTATCATA	NA	NA	NA	NA	NA	NA	NA	NA	77381901	77401070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77382028_77382959_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395562_77395983_77396207_77396846_77397050_77400471_77400639_77401011
ENSMUSG00000000290.14_5	chr10	+	1981	12	FSM	ENSMUSG00000000290.14	ENST00000397857.5	1996	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATGAGTTATCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	77382965	77401072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77383131_77384379_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395562_77395983_77396207_77396846_77397050_77400471_77400639_77401011
ENSMUSG00000000290.14_6	chr10	+	1801	11	FSM	ENSMUSG00000000290.14	ENST00000397854.7	1824	11	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAGAGCATGAGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	77384389	77401067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77384622_77385779_77385936_77386806_77386903_77391921_77392012_77393223_77393365_77393785_77393974_77395312_77395562_77395983_77396207_77396846_77397050_77400471_77400639_77401011
ENSMUSG00000000295.14_0	chr10	+	841	6	FSM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTCCAGACTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31189385	31204190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_31189480_31190510_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUSG00000000295.14_4	chr10	+	749	5	ISM	ENSMUSG00000000295.14	ENSMUST00000000304.14	858	6	1130	10	1130	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTCCAGACTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31190508	31204190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_31190633_31192288_31192392_31196263_31196333_31202017_31202157_31203876
ENSMUSG00000000296.9_0	chr10	-	1096	5	FSM	ENSMUSG00000000296.9	ENSMUST00000214644.2	1103	5	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATGGCTGGATCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31321846	31208375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_31208966_31222606_31222709_31233867_31234017_31255210_31255327_31321707
ENSMUSG00000000301.17_0	chr11	-	918	7	FSM	ENSMUSG00000000301.17	ENSMUST00000000310.14	953	7	26	9	26	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCACCTCTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	59937277	59861448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937169
ENSMUSG00000000301.17_1	chr11	-	949	7	FSM	ENSMUSG00000000301.17	ENSMUST00000102693.9	961	7	8	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACCTCTCTGGTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59937299	59861443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59861702_59862009_59862085_59864893_59865006_59867664_59867811_59874268_59874385_59922538_59922647_59937165
ENSMUSG00000000303.13_3	chr8	+	1990	12	NIC	ENSMUSG00000000303.13	novel	2033	13	NA	NA	23	-3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGTGAGGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	107380173	107396871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_107380283_107380395_107380552_107383455_107383601_107384371_107384548_107384822_107384952_107386221_107386405_107387427_107387673_107388516_107388663_107390378_107390604_107390827_107391056_107392025_107392157_107396754
ENSMUSG00000000305.13_0	chr2	+	2159	12	ISM	ENSMUSG00000000305.13	ENST00000543233.2	2179	13	20135	7	20135	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACTAACCAACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	179484766	179537700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_179484918_179489012_179489158_179501909_179502083_179515864_179516003_179523602_179523789_179527646_179527901_179528512_179528656_179530881_179531116_179532535_179532770_179534984_179535125_179535820_179535986_179537504
ENSMUSG00000000326.14_0	chr16	-	1964	5	FSM	ENSMUSG00000000326.14	ENSMUST00000165430.8	1978	5	11	3	11	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATAAGAAATTCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	18232233	18225638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18232015
ENSMUSG00000000326.14_2	chr16	-	1853	5	FSM	ENSMUSG00000000326.14	ENSMUST00000115609.10	1866	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACTGGAAGAGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	18245590	18226016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18245105
ENSMUSG00000000326.14_3	chr16	-	1378	6	FSM	ENSMUSG00000000326.14	ENSMUST00000000335.12	1397	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGATTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	18245341	18226299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18226791_18229432_18229565_18229876_18230071_18230439_18230708_18243053_18243111_18245105
ENSMUSG00000000339.15_0	chr3	-	1570	11	FSM	ENSMUSG00000000339.15	ENSMUST00000000348.15	1594	11	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCTAAATATGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	116301843	116282621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116282988_116286631_116286737_116287731_116287827_116289284_116289344_116291238_116291364_116293194_116293337_116294760_116294820_116297993_116298118_116300483_116300628_116301399_116301501_116301593
ENSMUSG00000000340.11_0	chr3	+	3286	11	FSM	ENSMUSG00000000340.11	ENSMUST00000000349.11	3301	11	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTATCATACTTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	116306722	116343619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_116306841_116313885_116314010_116317000_116317077_116326903_116327086_116328393_116328516_116332737_116332955_116333303_116333471_116337416_116337495_116339630_116339823_116339942_116340015_116341681
ENSMUSG00000000346.10_1	chr15	+	2117	4	FSM	ENSMUSG00000000346.10	ENSMUST00000000356.10	2135	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTCACGCCAGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	100513239	100518634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100513606_100514793_100514913_100515805_100516052_100517248
ENSMUSG00000000346.10_7	chr15	+	860	4	FSM	ENSMUSG00000000346.10	ENST00000549555.5	870	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTAAAGTTGCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	100513515	100517730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100513606_100514793_100514913_100515805_100515975_100517248
ENSMUSG00000000355.14_0	chrX	+	765	6	FSM	ENSMUSG00000000355.14	ENSMUST00000000365.3	783	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTAATTTCTGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	37689541	37702295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_37689656_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000355.14_1	chrX	+	1113	6	FSM	ENSMUSG00000000355.14	ENST00000371315.3	1127	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGTGTCTGTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	37689741	37702224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_37690275_37690805_37690959_37691452_37691551_37694815_37694950_37700642_37700711_37702097
ENSMUSG00000000359.4_0	chr2	+	1648	5	FSM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAATTATAGGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	152468877	152477106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152468967_152469819_152470356_152471096_152471177_152475375_152475578_152476365
ENSMUSG00000000359.4_1	chr2	+	1561	4	ISM	ENSMUSG00000000359.4	ENSMUST00000000369.4	1663	5	947	8	947	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAATTATAGGCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	152469817	152477106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_152470356_152471096_152471177_152475375_152475578_152476365
ENSMUSG00000000374.9_0	chr10	-	5033	23	FSM	ENSMUSG00000000374.9	ENSMUST00000000384.8	5047	23	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATGTATTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	78080464	78022561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78023929_78024589_78024785_78029192_78029371_78032121_78032293_78033571_78033699_78034877_78034979_78036451_78036682_78037265_78037425_78038713_78038856_78039714_78040227_78043267_78043381_78043725_78043867_78045217_78045310_78046211_78046289_78046597_78046713_78047309_78047457_78050401_78050650_78052983_78053096_78056022_78056219_78058497_78058695_78064612_78064749_78067287_78067370_78080269
ENSMUSG00000000378.16_1	chr11	+	1603	8	FSM	ENSMUSG00000000378.16	ENST00000544363.5	1620	8	13	4	-6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTTTTTTTCCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	6496880	6546756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_3	chr11	+	1837	10	FSM	ENSMUSG00000000378.16	ENSMUST00000000388.15	1858	10	11	10	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAATCTCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	6496897	6546734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6497030_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_6	chr11	+	2047	10	FSM	ENSMUSG00000000378.16	ENST00000475551.5	2071	10	16	8	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAATCTCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	6510899	6546734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6511242_6519963_6520138_6534519_6534604_6535033_6535218_6539431_6539569_6540752_6540889_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000378.16_9	chr11	+	1400	7	FSM	ENSMUSG00000000378.16	ENST00000474617.1	1422	7	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACAAGTTTACTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	6519972	6546711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6520138_6534519_6534604_6535033_6535218_6543066_6543125_6543601_6543741_6544147_6544287_6546080
ENSMUSG00000000384.16_0	chr11	-	2329	13	FSM	ENSMUSG00000000384.16	ENSMUST00000189268.7	2347	13	15	3	-9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGGGCCACTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6576052	6565601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6565767_6566557_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUSG00000000384.16_1	chr11	-	2283	12	FSM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6576038	6566424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148_6575214_6575964
ENSMUSG00000000384.16_2	chr11	-	2206	11	ISM	ENSMUSG00000000384.16	ENSMUST00000000394.14	2290	12	833	2	833	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGCTATCTTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6575210	6566424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_6566715_6567307_6567423_6567517_6567630_6567962_6568209_6568459_6568605_6568996_6569111_6569555_6569714_6569971_6570144_6570741_6571066_6573815_6574284_6575148
ENSMUSG00000000394.16_0	chr2	-	608	4	FSM	ENSMUSG00000000394.16	ENST00000375497.3	628	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCGAGAGTAAGTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	62314126	62307176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_62307306_62308898_62309061_62310808_62310909_62313909
ENSMUSG00000000399.11_0	chr6	-	1434	11	FSM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCTACAGCTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126826086	126798692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753_126821925_126826026
ENSMUSG00000000399.11_1	chr6	-	1371	10	ISM	ENSMUSG00000000399.11	ENSMUST00000205002.3	1445	11	4167	9	4167	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCTACAGCTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	126821921	126798692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_126799153_126801898_126801966_126804502_126804599_126809434_126809512_126811391_126811460_126813181_126813285_126817460_126817603_126819083_126819176_126821270_126821369_126821753
ENSMUSG00000000409.15_0	chr4	-	2180	12	FSM	ENSMUSG00000000409.15	ENSMUST00000067240.11	2185	12	2	3	2	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTTCTACTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	129452182	129442144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129442794_129445297_129445430_129445509_129445664_129445740_129445818_129449331_129449512_129449645_129449799_129450080_129450231_129450436_129450541_129450826_129450926_129451157_129451249_129451418_129451501_129451873
ENSMUSG00000000420.16_0	chr18	+	3956	13	FSM	ENSMUSG00000000420.16	ENSMUST00000000430.14	3977	13	13	8	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATGATACTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24338413	24419867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24338576_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000420.16_3	chr18	+	4093	13	FSM	ENSMUSG00000000420.16	ENSMUST00000170243.8	4108	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTTGAAAATATATGATA	NA	NA	NA	NA	NA	NA	NA	NA	24338831	24419860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24339138_24365655_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000420.16_7	chr18	+	3790	12	FSM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTGAAAATATATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	24365653	24419861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24365711_24371298_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000420.16_8	chr18	+	3734	11	ISM	ENSMUSG00000000420.16	ENSMUST00000178605.2	3796	12	5645	5	5645	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAAATATATGATACT	NA	NA	NA	NA	NA	NA	NA	NA	24371298	24419862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_24371543_24379106_24379282_24387574_24387742_24397381_24397590_24400584_24400756_24402504_24402623_24404642_24404824_24405718_24405859_24413000_24413100_24415158_24415294_24417766
ENSMUSG00000000435.2_0	chr10	-	2069	3	FSM	ENSMUSG00000000435.2	ENSMUST00000000445.2	2083	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGATATTTTTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	107321986	107318773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_107320072_107320506_107320583_107321291
ENSMUSG00000000439.10_0	chr6	+	6221	8	FSM	ENSMUSG00000000439.10	ENSMUST00000000449.9	6230	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCATACCTACACAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	115578868	115599582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115578975_115586541_115586671_115587479_115587662_115588595_115588901_115590287_115590503_115591535_115591647_115594258_115594404_115594554
ENSMUSG00000000440.13_0	chr6	+	2108	8	FSM	ENSMUSG00000000440.13	ENSMUST00000171644.8	2125	8	6	11	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTATAAAATTGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	115337917	115467349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115338332_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_14	chr6	+	1803	8	FSM	ENSMUSG00000000440.13	ENST00000643197.2	1817	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCCCACCCGCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	115350128	115467160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000440.13_19	chr6	+	1047	5	FSM	ENSMUSG00000000440.13	ENST00000397000.6	1063	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCTAAGAAATTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	115416810	115467228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115466908
ENSMUSG00000000440.13_4	chr6	+	2452	9	FSM	ENSMUSG00000000440.13	ENST00000683586.1	2472	9	9	11	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTATAAAATTGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	115349520	115467349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115349851_115349998_115350427_115360639_115360705_115416800_115417029_115418452_115418623_115427904_115428044_115440046_115440247_115449821_115450273_115466908
ENSMUSG00000000441.18_1	chr6	-	3059	17	FSM	ENSMUSG00000000441.18	ENSMUST00000000451.14	3070	17	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCAGTGCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	115653589	115595533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUSG00000000441.18_15	chr6	-	2975	18	FSM	ENSMUSG00000000441.18	ENST00000442415.7	2991	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTAATGGCTACTGACT	NA	NA	NA	NA	NA	NA	NA	NA	115653470	115595558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115596371_115596519_115596655_115596745_115596878_115597169_115597289_115598776_115598824_115599837_115600015_115600424_115600510_115603251_115603370_115603672_115603801_115603899_115603928_115607601_115607662_115608175_115608330_115609857_115609957_115611513_115611672_115611938_115612042_115614559_115614673_115621370_115621604_115653196
ENSMUSG00000000531.6_0	chr15	+	2015	8	FSM	ENSMUSG00000000531.6	ENSMUST00000000543.6	2033	8	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTCAGTGTGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	101122085	101130636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101122426_101124794_101124845_101126712_101126768_101126871_101126975_101128414_101128509_101128605_101128673_101128865_101128933_101129397
ENSMUSG00000000538.19_0	chr11	-	4914	14	FSM	ENSMUSG00000000538.19	ENSMUST00000095254.12	4940	14	18	8	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCCTGCCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	60243713	60117547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ENSMUSG00000000538.19_1	chr11	-	4987	15	FSM	ENSMUSG00000000538.19	ENSMUST00000102683.11	4999	15	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCCTGCCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	60243726	60117547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60161143_60161294_60165749_60165829_60171024_60171110_60243582
ENSMUSG00000000538.19_2	chr11	-	4810	14	FSM	ENSMUSG00000000538.19	ENSMUST00000093046.13	4849	14	32	7	32	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCCCTGCCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	60243699	60117547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60121068_60121926_60121964_60123723_60123784_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60151880_60152040_60153474_60153610_60165749_60165829_60171024_60171110_60243582
ENSMUSG00000000538.19_3	chr11	-	1181	10	ISM	ENSMUSG00000000538.19	ENST00000540946.5	1264	11	5279	0	5279	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCACCTTCTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60165828	60120770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749
ENSMUSG00000000538.19_4	chr11	-	1259	11	FSM	ENSMUSG00000000538.19	ENST00000540946.5	1264	11	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCACCTTCTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60171102	60120770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60121068_60121926_60121964_60132643_60132720_60133533_60133652_60135887_60136012_60136461_60136511_60139756_60139891_60149681_60149799_60161143_60161294_60165749_60165829_60171024
ENSMUSG00000000552.11_12	chr15	-	1102	6	FSM	ENSMUSG00000000552.11	ENST00000551771.5	1107	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGGTCTCTCCTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103241729	103223328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103226375_103226539_103228716_103228828_103241491
ENSMUSG00000000552.11_4	chr15	-	2451	8	FSM	ENSMUSG00000000552.11	ENST00000546970.5	2470	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCTGGATTTGTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	103242742	103222347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103223653_103223787_103223884_103224053_103224224_103224308_103224552_103226375_103226539_103228716_103228828_103241491_103241629_103242516
ENSMUSG00000000555.9_0	chr15	-	4358	30	FSM	ENSMUSG00000000555.9	ENSMUST00000023128.8	4382	30	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCAAAGTTGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	103275176	103252722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103253780_103254378_103254502_103255007_103255110_103256097_103256212_103256318_103256403_103258038_103258192_103258591_103258698_103258800_103258882_103259000_103259081_103259190_103259284_103259372_103259524_103259804_103259873_103259967_103260106_103260441_103260597_103260684_103260741_103260910_103261013_103261342_103261389_103261569_103261762_103262000_103262210_103262473_103262527_103262694_103262752_103264352_103264397_103264503_103264549_103264742_103264869_103265205_103265252_103265346_103265409_103265618_103265740_103265874_103265988_103267476_103267608_103274726
ENSMUSG00000000560.10_0	chr5	-	2562	11	FSM	ENSMUSG00000000560.10	ENST00000540012.5	2583	11	12	9	-8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTACCTAAAATTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71253200	71118417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71192072_71192141_71249314_71249431_71251874_71251946_71252899
ENSMUSG00000000560.10_7	chr5	-	1526	10	FSM	ENSMUSG00000000560.10	ENST00000507069.5	1536	10	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACTAGACTTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	71251941	71119148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71192072_71192141_71249314_71249431_71251874
ENSMUSG00000000560.10_8	chr5	-	1457	9	ISM	ENSMUSG00000000560.10	ENST00000507069.5	1536	10	2514	9	2514	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCATGAAACTAGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	71249432	71119152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_71119442_71125342_71125521_71130767_71130971_71163449_71163603_71165265_71165410_71170043_71170127_71171758_71171980_71192072_71192141_71249314
ENSMUSG00000000561.15_0	chr3	+	3666	10	FSM	ENSMUSG00000000561.15	ENSMUST00000010278.12	3682	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTAGGAAATTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	105866694	105877070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478
ENSMUSG00000000563.18_0	chr3	-	1586	8	FSM	ENSMUSG00000000563.18	ENSMUST00000118209.8	1604	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	5814	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGAATTTATAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	105867405	105850021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_105850380_105851002_105851183_105858906_105859033_105861333_105861498_105863211_105863358_105866177_105866215_105866463_105866875_105867241
ENSMUSG00000000567.6_0	chr11	+	4115	3	FSM	ENSMUSG00000000567.6	ENSMUST00000000579.3	4135	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCCCCTTTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	112673060	112678577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_112673842_112674634_112674889_112675497
ENSMUSG00000000568.16_0	chr5	-	6759	9	FSM	ENSMUSG00000000568.16	ENSMUST00000172361.8	6811	9	47	5	26	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTTTTTTGCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	100126750	100103798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100124392_100124450_100126250
ENSMUSG00000000568.16_1	chr5	-	1645	8	FSM	ENSMUSG00000000568.16	ENSMUST00000112939.10	1670	8	14	11	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATGTATTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100126762	100108867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100109193_100110373_100110472_100111589_100111737_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ENSMUSG00000000568.16_2	chr5	-	1489	7	FSM	ENSMUSG00000000568.16	ENSMUST00000072750.13	1537	7	41	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATGTATTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100126753	100108867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100109193_100110373_100110472_100111842_100111943_100112528_100112661_100113880_100114043_100115077_100115247_100126250
ENSMUSG00000000579.15_1	chr17	+	2573	5	FSM	ENSMUSG00000000579.15	ENSMUST00000092966.5	2589	5	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1626	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	6869079	6877072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6869236_6870885_6870928_6874010_6874135_6874472_6874551_6874899
ENSMUSG00000000581.9_1	chr11	+	2976	5	FSM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGAATTTTACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17207595	17219173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17207659_17212647_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000581.9_5	chr11	+	473	4	ISM	ENSMUSG00000000581.9	ENSMUST00000000594.9	2981	5	5055	2442	5055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTAATCAGTTTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	17212648	17216734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_17212795_17213608_17213676_17213950_17214007_17216530
ENSMUSG00000000594.8_0	chr11	+	4114	4	FSM	ENSMUSG00000000594.8	ENSMUST00000000608.8	4127	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTCTGTTAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54988950	55003852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54989071_54994412_54994575_54999723_54999907_55000203
ENSMUSG00000000600.16_0	chr5	+	2919	17	FSM	ENSMUSG00000000600.16	ENSMUST00000080085.9	2930	17	4	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGAATCTATTATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	3853187	3891352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3853484_3856464_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3863050_3863195_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886895_3890873
ENSMUSG00000000600.16_5	chr5	+	2308	16	FSM	ENSMUSG00000000600.16	ENSMUST00000200386.5	2343	16	25	10	25	-10	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCTCATGAGAACGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	3853214	3895554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3853484_3856418_3856569_3857298_3857459_3859635_3859729_3861255_3861386_3862331_3862576_3862741_3862858_3868526_3868684_3869309_3869418_3872086_3872244_3873633_3873786_3880605_3880773_3881495_3881584_3882019_3882227_3886777_3886816_3895482
ENSMUSG00000000605.10_0	chr7	-	4598	13	FSM	ENSMUSG00000000605.10	ENSMUST00000000619.8	4607	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTCTTTGGTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7302523	7285307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690_7301836_7302239
ENSMUSG00000000605.10_13	chr7	-	2406	13	FSM	ENSMUSG00000000605.10	ENSMUST00000210061.2	2445	13	14	25	14	22	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	7301791	7287078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294726_7294818_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7299722_7299878_7301690
ENSMUSG00000000605.10_16	chr7	-	2524	12	FSM	ENSMUSG00000000605.10	ENSMUST00000210594.2	2539	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTAATGAAAAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	7302253	7287107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297994_7298183_7298968_7299069_7301690_7301836_7302088
ENSMUSG00000000605.10_6	chr7	-	3495	11	FSM	ENSMUSG00000000605.10	ENST00000421085.7	3511	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTATACAGCCAATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	7299872	7286000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7287274_7290644_7290862_7291873_7292273_7293397_7293585_7294409_7294956_7296036_7296118_7296913_7297121_7297731_7297855_7297970_7298183_7298968_7299069_7299722
ENSMUSG00000000606.19_0	chr14	+	4335	5	FSM	ENSMUSG00000000606.19	ENSMUST00000233920.2	4345	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATAAATGAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	51648276	51658168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51648664_51650494_51650778_51651176_51651981_51654161_51654286_51655431
ENSMUSG00000000617.15_0	chr11	+	2581	10	FSM	ENSMUSG00000000617.15	ENSMUST00000000631.8	4291	10	185	1525	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGCAAGGTTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	50741997	50755479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50742455_50744016_50744234_50744791_50744928_50746510_50746666_50747783_50747925_50748026_50748228_50750083_50750230_50750320_50750945_50753803_50754116_50755287
ENSMUSG00000000627.16_0	chr6	-	2139	10	FSM	ENSMUSG00000000627.16	ENST00000339773.9	2162	10	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCAACCCTGTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	82916684	82890281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_82891086_82891347_82891407_82894302_82894464_82894569_82894680_82894803_82895027_82895164_82895313_82895512_82895692_82912875_82912936_82914041_82914194_82916441
ENSMUSG00000000628.11_0	chr6	-	5499	18	FSM	ENSMUSG00000000628.11	ENSMUST00000000642.11	5513	18	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTCAGTGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	82751425	82702009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_82704436_82705692_82705927_82706525_82706682_82707748_82707933_82708028_82708129_82709081_82709178_82711828_82711949_82712227_82712377_82713510_82713816_82715267_82715502_82716499_82716656_82719783_82719968_82720248_82720349_82720925_82721022_82721842_82721963_82726169_82726319_82737084_82737248_82750898
ENSMUSG00000000631.21_0	chr11	+	7499	42	FSM	ENSMUSG00000000631.21	ENSMUST00000108375.9	7513	42	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77654085	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ENSMUSG00000000631.21_1	chr11	+	7491	41	NIC	ENSMUSG00000000631.21	novel	7513	42	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77654081	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_77654206_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ENSMUSG00000000631.21_12	chr11	+	7299	40	FSM	ENSMUSG00000000631.21	ENSMUST00000092887.11	7304	40	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77668095	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_14	chr11	+	7303	40	FSM	ENSMUSG00000000631.21	ENSMUST00000000645.13	7307	40	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77668094	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713915_77713931_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_19	chr11	+	6195	42	FSM	ENSMUSG00000000631.21	ENSMUST00000130627.9	6202	42	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTCTCCCACCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	77668148	77755674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77669141_77706681_77706718_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ENSMUSG00000000631.21_24	chr11	+	6159	39	FSM	ENSMUSG00000000631.21	ENSMUST00000100794.10	6182	39	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATCTGGGGGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	77692141	77756658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77692207_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_25	chr11	+	6330	41	NIC	ENSMUSG00000000631.21	novel	6339	42	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77692175	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_77692207_77706681_77706718_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77712355_77712377_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_32	chr11	+	5106	39	ISM	ENSMUSG00000000631.21	ENSMUST00000092884.11	5117	40	16243	6	6103	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCCTGGGATGGCTCACG	NA	NA	NA	NA	NA	NA	NA	NA	77708443	77755657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_34	chr11	+	5356	40	ISM	ENSMUSG00000000631.21	ENSMUST00000164334.8	5381	41	16261	2	6121	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCCGCTCTGGGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	77708461	77755880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77745503_77745549_77748548_77748672_77755516
ENSMUSG00000000631.21_6	chr11	+	7351	40	FSM	ENSMUSG00000000631.21	ENSMUST00000108376.9	7374	40	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77657584	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77657713_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000631.21_9	chr11	+	7399	41	FSM	ENSMUSG00000000631.21	ENSMUST00000102488.8	7409	41	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAAGTTTCCCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	77662986	77756806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77663052_77668060_77669141_77708444_77708533_77708724_77708832_77708927_77709105_77709406_77709621_77709736_77709880_77710802_77710904_77711623_77711688_77711867_77712013_77713488_77713501_77714101_77714273_77714587_77714679_77714918_77715112_77715928_77716010_77718361_77718504_77718616_77718777_77720002_77720190_77720445_77720690_77723219_77723330_77727242_77727309_77731506_77731636_77732273_77732418_77732744_77732835_77732973_77733094_77733282_77733395_77733929_77734058_77734342_77734498_77736221_77736346_77736433_77736635_77737197_77737309_77737716_77737822_77738117_77738265_77738750_77738865_77740195_77740313_77741047_77741132_77741571_77741710_77744042_77744229_77744577_77744718_77748548_77748672_77755516
ENSMUSG00000000632.14_0	chr11	+	4206	17	FSM	ENSMUSG00000000632.14	ENST00000360295.13	4223	17	9	8	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATCAAGCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77821634	77869866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77821941_77844233_77844894_77845575_77845710_77853680_77853877_77859727_77859914_77863673_77863843_77863919_77864087_77864608_77864804_77865016_77865156_77865265_77865463_77865971_77866167_77867297_77867490_77867569_77867768_77868070_77868110_77868362_77868481_77868567_77868671_77868854
ENSMUSG00000000686.12_0	chr11	+	2644	2	FSM	ENSMUSG00000000686.12	ENSMUST00000094004.5	2662	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGAAGTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77405959	77410866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77406879_77409141
ENSMUSG00000000693.11_0	chr6	+	4069	14	FSM	ENSMUSG00000000693.11	ENSMUST00000000707.9	4098	14	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAGGACAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	83011166	83029527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83011271_83012435_83012779_83014409_83014574_83015375_83015591_83024968_83025189_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ENSMUSG00000000693.11_10	chr6	+	1741	10	FSM	ENSMUSG00000000693.11	ENST00000409986.5	1762	10	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGTAGGTAACAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	83012473	83027646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83012779_83014409_83014574_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538
ENSMUSG00000000693.11_12	chr6	+	2264	11	FSM	ENSMUSG00000000693.11	ENST00000393937.6	2277	11	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCGGAGCCCAGGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	83012471	83028297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83012779_83014409_83014574_83025558_83025740_83025849_83026005_83026164_83026333_83026464_83026628_83026754_83026999_83027096_83027213_83027288_83027426_83027538_83027651_83027780
ENSMUSG00000000706.17_0	chr13	-	1702	5	FSM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAGGCAGGAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23649349	23642730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401_23648750_23649271
ENSMUSG00000000706.17_1	chr13	-	1625	4	ISM	ENSMUSG00000000706.17	ENST00000244513.10	1709	5	603	3	603	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAGGCAGGAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	23648750	23642730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_23643565_23644624_23644785_23645655_23645938_23648401
ENSMUSG00000000708.15_0	chr17	+	4628	18	FSM	ENSMUSG00000000708.15	ENSMUST00000000724.15	4653	18	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCTGTCTGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	53874015	53979740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_53874607_53917891_53918019_53931379_53931526_53936351_53936445_53939564_53939747_53945379_53945572_53948220_53948328_53951641_53951765_53955774_53955912_53960049_53960259_53961466_53961594_53966345_53966457_53967056_53967201_53970562_53970678_53972433_53972471_53972680_53972745_53972850_53972936_53977702
ENSMUSG00000000711.4_0	chr10	-	3157	6	FSM	ENSMUSG00000000711.4	ENSMUST00000000727.4	3180	6	1	22	1	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAAAGGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	128532132	128513065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128519063_128519216_128522616_128522878_128532054
ENSMUSG00000000711.4_2	chr10	-	475	4	FSM	ENSMUSG00000000711.4	ENST00000628569.1	496	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTGAGGGGTGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	128522767	128515407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128515515_128517254_128517349_128518692_128518816_128522616
ENSMUSG00000000731.16_0	chr10	-	1575	14	FSM	ENSMUSG00000000731.16	ENST00000291582.6	1593	14	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATGTCACGCCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	77879327	77866124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77866159_77867654_77867720_77870214_77870324_77870419_77870535_77871486_77871668_77872518_77872619_77873706_77873823_77875495_77875577_77875764_77875914_77877333_77877448_77877894_77877970_77878350_77878507_77878735_77878911_77879222
ENSMUSG00000000738.19_0	chr8	+	2401	17	FSM	ENSMUSG00000000738.19	ENSMUST00000125975.8	2408	17	0	7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGAGCTCTCCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123789726	123824492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123789774_123793211_123793315_123797118_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_15	chr8	+	2346	16	ISM	ENSMUSG00000000738.19	ENSMUST00000125975.8	2408	17	3491	9	1003	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAGCTCTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	123793217	123824490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123793315_123797118_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_19	chr8	+	2012	15	FSM	ENSMUSG00000000738.19	ENST00000268704.7	2031	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGAGGCTCCGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797118	123824274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806728_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_20	chr8	+	1578	12	FSM	ENSMUSG00000000738.19	ENST00000645897.1	1590	12	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGAGGCTCCGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123797111	123824274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_29	chr8	+	1487	11	ISM	ENSMUSG00000000738.19	ENST00000645897.1	1590	12	3378	8	3378	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGAGGCTCCGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	123800485	123824274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000738.19_5	chr8	+	2876	17	FSM	ENSMUSG00000000738.19	ENSMUST00000149248.9	2896	17	11	9	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTGAGCTCTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	123791928	123824490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123792449_123793211_123793315_123797114_123797205_123800487_123800730_123803589_123803730_123804556_123804660_123806152_123806279_123806707_123806871_123807375_123807550_123814066_123814192_123815683_123815787_123816862_123816974_123818373_123818490_123820329_123820487_123821212_123821380_123821896_123821975_123824132
ENSMUSG00000000740.13_0	chr8	+	762	6	FSM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	24217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCAAAAGCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123829095	123831972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123829185_123829391_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUSG00000000740.13_6	chr8	+	675	5	ISM	ENSMUSG00000000740.13	ENSMUST00000000756.6	780	6	301	11	301	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCAAAAGCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123829389	123831972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123829502_123829583_123829726_123829921_123830096_123830636_123830694_123831782
ENSMUSG00000000743.10_0	chr8	-	2128	7	FSM	ENSMUSG00000000743.10	ENSMUST00000000759.9	2140	7	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACGTCTCAGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123939492	123931007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123932486_123932882_123933071_123934211_123934341_123934702_123934850_123935759_123935838_123936954_123936975_123939404
ENSMUSG00000000743.10_10	chr8	-	384	3	ISM	ENSMUSG00000000743.10	ENST00000675778.1	418	4	1147	4	1147	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123935828	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_123933071_123934211_123934341_123935759
ENSMUSG00000000743.10_11	chr8	-	578	5	FSM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123936975	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123933088_123934211_123934341_123934702_123934850_123935759_123935838_123936954
ENSMUSG00000000743.10_12	chr8	-	548	4	ISM	ENSMUSG00000000743.10	ENST00000535997.7	582	5	1147	4	1147	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123935828	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_123933088_123934211_123934341_123934702_123934850_123935759
ENSMUSG00000000743.10_15	chr8	-	534	5	FSM	ENSMUSG00000000743.10	ENST00000550102.5	538	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123936975	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123933071_123934211_123934341_123934729_123934850_123935759_123935838_123936954
ENSMUSG00000000743.10_8	chr8	-	506	4	ISM	ENSMUSG00000000743.10	ENST00000550102.5	538	5	1145	4	1145	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123935830	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_123933071_123934211_123934341_123934729_123934850_123935759
ENSMUSG00000000743.10_9	chr8	-	414	4	FSM	ENSMUSG00000000743.10	ENST00000675778.1	418	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTAGGTGCTGTCTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	123936975	123932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123933071_123934211_123934341_123935759_123935838_123936954
ENSMUSG00000000751.14_0	chr11	-	5062	17	FSM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	7	8	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTAGTGTGCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75239143	75188999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUSG00000000751.14_1	chr11	-	4972	16	ISM	ENSMUSG00000000751.14	ENSMUST00000092907.12	5077	17	6128	8	6114	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTAGTGTGCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75233022	75188999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75231115_75231225_75231853_75231933_75232969
ENSMUSG00000000751.14_10	chr11	-	2932	18	FSM	ENSMUSG00000000751.14	ENSMUST00000000767.6	2942	18	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTACTTTCTTTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	75239130	75191179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75192230_75193493_75193581_75196933_75197042_75197940_75198118_75200958_75201092_75203125_75203275_75203518_75203659_75203803_75203997_75204126_75204196_75205638_75205742_75206930_75207064_75209237_75209358_75219498_75219588_75230538_75230602_75231115_75231225_75231853_75231933_75232969_75233021_75239051
ENSMUSG00000000753.16_0	chr11	-	1812	8	FSM	ENSMUSG00000000753.16	ENSMUST00000000769.14	1832	8	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	5355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCTGGGGAAATCAAC	NA	NA	NA	NA	NA	NA	NA	NA	75313516	75300603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308734_75308823_75313321
ENSMUSG00000000753.16_23	chr11	-	1236	7	FSM	ENSMUSG00000000753.16	ENST00000254722.9	1250	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGTAGTACTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	75308810	75300976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75301220_75301659_75301871_75304732_75304876_75305746_75305951_75306400_75306557_75307055_75307255_75308730
ENSMUSG00000000759.15_0	chr8	-	3784	22	FSM	ENSMUSG00000000759.15	ENSMUST00000000776.15	3797	22	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTTCATGTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12722238	12664279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_12665297_12666021_12666139_12671798_12671940_12674817_12674950_12675024_12675114_12682237_12682374_12686945_12687015_12687666_12687803_12689525_12689716_12690700_12690810_12691096_12691208_12698620_12698788_12699689_12699823_12700153_12700223_12703363_12703490_12704233_12704353_12705805_12705979_12707445_12707658_12708299_12708378_12711299_12711368_12713931_12714040_12721954
ENSMUSG00000000776.14_0	chr14	-	2003	9	FSM	ENSMUSG00000000776.14	ENSMUST00000000793.13	2016	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGAAGAAGTAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	70680880	70676202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390_70680561_70680772
ENSMUSG00000000776.14_1	chr14	-	2022	8	FSM	ENSMUSG00000000776.14	ENSMUST00000180358.3	2032	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTCTATTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	70680720	70676235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70677019_70677157_70677311_70677453_70677720_70678038_70678208_70678476_70678602_70678743_70678896_70679791_70679836_70680390
ENSMUSG00000000782.17_0	chr11	-	2427	9	ISM	ENSMUSG00000000782.17	ENSMUST00000086844.10	2471	10	347	4	335	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAAATATTTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	52173051	52143201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52149679_52149773_52151357_52151449_52152339_52152452_52172948
ENSMUSG00000000782.17_2	chr11	-	2027	8	ISM	ENSMUSG00000000782.17	ENST00000395023.5	2084	9	320	0	320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGTTTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	52173066	52143520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948
ENSMUSG00000000782.17_3	chr11	-	2084	9	FSM	ENSMUSG00000000782.17	ENST00000395023.5	2084	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTGTTTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	52173386	52143520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173336
ENSMUSG00000000782.17_4	chr11	-	2549	10	FSM	ENSMUSG00000000782.17	ENST00000342854.10	2559	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTTTGTTTTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	52174203	52143521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_52144790_52147084_52147134_52147566_52147675_52147775_52147939_52148510_52148631_52151357_52151446_52152339_52152452_52172948_52173074_52173538_52173606_52173754
ENSMUSG00000000787.13_1	chrX	+	4672	17	FSM	ENSMUSG00000000787.13	ENSMUST00000000804.7	4692	17	19	1	19	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCGTTTGATTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	13147227	13160290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_21	chrX	+	4288	14	ISM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	5010	105	5010	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATATTCTGGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	13152272	13160181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_3	chrX	+	4256	17	FSM	ENSMUSG00000000787.13	ENST00000644513.1	4262	17	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGTTTAGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	13147268	13159912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157545_13157651
ENSMUSG00000000787.13_4	chrX	+	4128	16	FSM	ENSMUSG00000000787.13	ENST00000441189.4	4139	16	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTCAGATGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	13147270	13159888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13147397_13150416_13150475_13151153_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000787.13_6	chrX	+	4622	17	FSM	ENSMUSG00000000787.13	ENST00000644074.1	4630	17	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTGTCGTTTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	13147270	13160286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13147397_13150416_13150475_13151156_13151202_13152272_13152406_13153463_13153623_13153702_13153803_13154023_13154160_13154517_13154604_13154811_13154911_13155018_13155180_13155633_13155779_13156075_13156221_13156417_13156600_13156684_13156803_13157139_13157294_13157401_13157542_13157651
ENSMUSG00000000791.10_0	chr8	+	2835	16	FSM	ENSMUSG00000000791.10	ENSMUST00000000808.8	2873	16	28	10	-7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTAAATCTGGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	71261120	71274058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71261263_71262474_71262535_71263198_71263314_71263682_71263877_71265121_71265259_71265948_71266016_71266296_71266423_71266709_71266793_71267080_71267319_71268345_71268514_71269076_71269212_71269527_71269684_71269855_71269991_71271968_71272066_71272325_71272408_71273158
ENSMUSG00000000791.10_3	chr8	+	2714	15	FSM	ENSMUSG00000000791.10	ENSMUST00000212657.2	2741	15	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAAACTAAATCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	71261141	71274055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71261263_71262474_71262535_71263198_71263314_71263682_71263877_71265121_71265259_71265948_71266016_71266296_71266423_71266709_71266793_71267080_71267319_71268345_71268514_71269076_71269212_71269527_71269684_71269855_71269991_71272325_71272408_71273158
ENSMUSG00000000792.3_0	chr8	-	2920	15	FSM	ENSMUSG00000000792.3	ENSMUST00000000809.3	2928	15	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCAGTGGCCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	71345396	71335535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71336613_71337564_71337681_71338673_71338799_71340337_71340520_71340597_71340685_71341024_71341096_71341166_71341280_71341469_71341559_71341983_71342114_71342210_71342352_71342860_71343016_71343757_71343826_71343921_71343974_71344295_71344362_71344948
ENSMUSG00000000794.10_0	chr3	+	1650	8	FSM	ENSMUSG00000000794.10	ENST00000358505.2	1671	8	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATTACCCATAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	89429320	89574705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89429691_89472165_89472262_89516624_89517044_89552748_89552891_89559324_89559436_89568427_89568556_89570020_89570091_89574391
ENSMUSG00000000804.15_0	chr11	-	7048	34	FSM	ENSMUSG00000000804.15	ENSMUST00000108075.9	7053	34	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTTCTCTTTGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	85030860	84875268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84877410_84878094_84878188_84879159_84879585_84883278_84883568_84885211_84885404_84896633_84896755_84897818_84897906_84900784_84900970_84908455_84908668_84910590_84910703_84912981_84913134_84913556_84913732_84916344_84916519_84917601_84917708_84917926_84918066_84919886_84919962_84921308_84921391_84922894_84923050_84927347_84927466_84930026_84930168_84930820_84930997_84933313_84933507_84935535_84935639_84941212_84941275_84942016_84942101_84944473_84944537_84944759_84944876_84946591_84946700_84949953_84950086_84968090_84968251_84971956_84972076_84974614_84974721_84994724_84994853_85030536
ENSMUSG00000000811.15_0	chr6	+	2816	16	FSM	ENSMUSG00000000811.15	ENSMUST00000000828.14	2836	16	5	15	5	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATGCCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	89620974	89652496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649152_89649261_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000811.15_2	chr6	+	1824	15	FSM	ENSMUSG00000000811.15	ENST00000523403.3	1841	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCACTCTGTGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	89621169	89651807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_89621385_89627507_89627569_89628480_89628591_89631035_89631141_89631330_89631404_89633009_89633130_89638440_89638584_89640058_89640175_89641359_89641586_89642681_89642775_89646286_89646364_89646799_89646957_89649949_89650046_89651042_89651178_89651710
ENSMUSG00000000817.11_0	chr1	-	788	3	FSM	ENSMUSG00000000817.11	ENST00000340030.4	803	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAGCATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	161615850	161609146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161609540_161610516_161610574_161615512
ENSMUSG00000000823.17_0	chr2	-	5694	17	FSM	ENSMUSG00000000823.17	ENSMUST00000108789.9	5714	17	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	181234579	181223898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181226867_181227465_181227565_181228091_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234213
ENSMUSG00000000823.17_1	chr2	-	5687	17	NNC	ENSMUSG00000000823.17	novel	5714	17	NA	NA	23	-3	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTTGTGTGGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	181234573	181223898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_181226867_181227465_181227565_181228092_181228155_181228511_181228614_181228839_181229035_181229521_181229693_181229773_181229873_181230006_181230100_181230188_181230314_181230447_181230595_181230698_181230771_181230871_181231081_181231165_181231753_181231845_181231975_181232262_181232406_181232652_181232779_181234213
ENSMUSG00000000826.17_0	chr2	+	6559	5	FSM	ENSMUSG00000000826.17	ENSMUST00000072334.12	6578	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTACCTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	181162286	181196916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181162491_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUSG00000000826.17_2	chr2	+	3657	6	FSM	ENSMUSG00000000826.17	ENSMUST00000108797.8	3664	6	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAGAAAAAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	181162345	181194020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181162491_181163027_181163081_181188163_181188282_181189132_181189347_181190462_181190635_181191065
ENSMUSG00000000827.19_0	chr2	+	3591	8	FSM	ENSMUSG00000000827.19	ENSMUST00000149163.8	3603	8	12	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGTAAGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	181138969	181159759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000827.19_2	chr2	+	2932	7	FSM	ENSMUSG00000000827.19	ENSMUST00000000844.15	2950	7	11	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTGGAAGACAATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	181138984	181159157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181144668_181144729_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_5	chr2	+	3465	6	FSM	ENSMUSG00000000827.19	ENSMUST00000108800.8	3475	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGAACATTTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	181138985	181159751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181154831_181154881_181156872
ENSMUSG00000000827.19_7	chr2	+	1793	7	FSM	ENSMUSG00000000827.19	ENSMUST00000069712.9	1799	7	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGAACTCTGCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	181138993	181158045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181139126_181141637_181141784_181143697_181143847_181149958_181150061_181153366_181153409_181154831_181154881_181156872
ENSMUSG00000000838.18_1	chrX	+	1824	15	FSM	ENSMUSG00000000838.18	ENST00000621453.4	1838	15	13	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAGTACCCTAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	67722233	67759266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759170
ENSMUSG00000000838.18_11	chrX	+	255	2	FSM	ENSMUSG00000000838.18	ENST00000621447.1	267	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACATCTGAGAGAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	67722373	67723100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_67722474_67722945
ENSMUSG00000000838.18_2	chrX	+	4297	16	FSM	ENSMUSG00000000838.18	ENST00000218200.12	4312	16	8	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTATGAAAAAGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	67722228	67761551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_67722474_67731887_67731941_67735106_67735201_67738619_67738692_67739094_67739244_67741273_67741368_67741453_67741571_67743665_67743837_67743947_67744027_67747268_67747379_67748854_67748987_67751647_67751735_67754189_67754386_67755836_67756020_67756846_67756930_67759119
ENSMUSG00000000861.16_0	chr11	+	5489	3	FSM	ENSMUSG00000000861.16	ENST00000335712.11	5545	3	23	33	-3	-33	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAGAAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24028052	24117911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_24028446_24035320_24035651_24113145
ENSMUSG00000000861.16_1	chr11	+	719	3	FSM	ENSMUSG00000000861.16	ENST00000643004.1	741	3	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTCCTTGGGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	24028224	24059144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_24028446_24035320_24035651_24058976
ENSMUSG00000000876.12_0	chr2	-	2765	4	FSM	ENSMUSG00000000876.12	ENSMUST00000000896.11	2789	4	13	11	-7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAACCTTAGCCGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	154445615	154427688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154430013_154434084_154434284_154438121_154438185_154445436
ENSMUSG00000000876.12_1	chr2	-	544	3	FSM	ENSMUSG00000000876.12	ENSMUST00000109703.3	560	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTAAGTTGCAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	154445600	154437173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154437491_154438121_154438185_154445436
ENSMUSG00000000881.13_0	chrX	+	4875	19	FSM	ENSMUSG00000000881.13	ENSMUST00000000901.13	4885	19	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTTGCAATGAACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	99811327	99862002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99812035_99815220_99815272_99815662_99815788_99815972_99816143_99816428_99816566_99816870_99817016_99817677_99817838_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99853467_99853514_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ENSMUSG00000000881.13_1	chrX	+	3656	14	FSM	ENSMUSG00000000881.13	ENSMUST00000113735.3	3692	14	32	4	32	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACAATGGCTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	99818378	99862010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99818551_99819412_99819570_99819984_99820088_99840291_99840407_99850117_99850295_99850785_99850862_99851658_99851759_99855107_99855150_99856331_99856383_99856942_99857045_99857809_99857983_99858398_99858509_99858813_99858906_99859824
ENSMUSG00000000884.18_0	chr16	+	1471	8	FSM	ENSMUSG00000000884.18	ENSMUST00000231621.2	1485	8	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGAAGCCTCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	18317472	18383286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18317602_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_13	chr16	+	3477	7	ISM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	163	3	163	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGCTAGACTTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	18317800	18385426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_19	chr16	+	936	6	FSM	ENSMUSG00000000884.18	ENST00000329517.11	957	6	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTAGCTGTGGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	18359245	18383032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371337_18382784
ENSMUSG00000000884.18_2	chr16	+	3585	9	FSM	ENSMUSG00000000884.18	ENSMUST00000167778.9	3592	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGACCTGGGGGATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	18317635	18385370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362864_18363024_18363866_18363964_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_4	chr16	+	3544	8	FSM	ENSMUSG00000000884.18	ENSMUST00000090086.11	3549	8	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGCTAGACTTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	18317639	18385426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371116_18371333_18382784
ENSMUSG00000000884.18_6	chr16	+	3504	8	FSM	ENSMUSG00000000884.18	ENSMUST00000115601.8	3507	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGCTAGACTTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	18317637	18385426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18317702_18317795_18317891_18359184_18359326_18359721_18359848_18362860_18363024_18366842_18366942_18371158_18371333_18382784
ENSMUSG00000000889.9_0	chr2	+	2543	12	FSM	ENSMUSG00000000889.9	ENSMUST00000000910.7	2552	12	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGGCTCATGTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27055252	27073211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27055879_27058184_27058332_27060323_27060582_27061323_27061501_27062715_27062819_27064826_27064994_27067319_27067464_27067725_27067765_27068199_27068260_27070988_27071117_27071482_27071643_27072677
ENSMUSG00000000901.18_0	chr10	-	2271	8	FSM	ENSMUSG00000000901.18	ENSMUST00000000924.13	2288	8	15	2	-12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75768321	75759057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUSG00000000901.18_1	chr10	-	1768	9	FSM	ENSMUSG00000000901.18	ENSMUST00000120281.8	1793	9	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCCTGTCTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75768286	75759057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75759325_75759792_75759950_75761253_75761512_75762244_75762462_75762581_75762824_75762962_75763097_75763180_75763325_75764113_75764344_75768167
ENSMUSG00000000902.14_0	chr10	-	1645	9	FSM	ENSMUSG00000000902.14	ENSMUST00000000925.10	1660	9	9	6	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTGTGCAGTAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	75757442	75732608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752606_75752746_75757136
ENSMUSG00000000902.14_10	chr10	-	1335	8	FSM	ENSMUSG00000000902.14	ENST00000263121.12	1352	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAAGTACCATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75757290	75732628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75750897_75751028_75752606_75752746_75757136
ENSMUSG00000000902.14_4	chr10	-	1606	9	FSM	ENSMUSG00000000902.14	ENSMUST00000121304.2	1622	9	9	7	9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTCAATTTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	75757439	75732617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75732923_75733278_75733411_75740217_75740409_75741863_75742031_75745987_75746116_75747352_75747491_75750897_75751028_75752633_75752746_75757136
ENSMUSG00000000915.16_0	chr5	+	6713	32	FSM	ENSMUSG00000000915.16	ENSMUST00000000939.15	6735	32	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAAAACATTGAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	124111703	124143612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124111919_124127367_124127432_124127653_124127797_124127999_124128057_124129004_124129086_124129500_124129578_124129806_124129869_124132780_124132922_124133958_124134017_124134101_124134178_124134293_124134435_124134582_124134645_124134833_124134907_124134993_124135178_124135266_124135356_124135426_124135544_124135613_124135716_124135920_124136116_124136848_124136997_124137104_124137192_124137545_124137654_124137833_124137971_124138202_124138314_124138408_124138468_124138664_124138696_124138774_124138838_124139054_124139156_124139268_124139375_124139487_124139612_124139693_124139756_124139850_124140058_124140180
ENSMUSG00000000916.16_0	chr5	+	2225	10	FSM	ENSMUSG00000000916.16	ENSMUST00000000940.15	2243	10	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTTAAAAAATGTTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	135398821	135405649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135398931_135399044_135399168_135400094_135400270_135400351_135400461_135402807_135402947_135403037_135403154_135403780_135403960_135404128_135404340_135404408_135404553_135404729
ENSMUSG00000000934.10_0	chr15	-	1893	14	FSM	ENSMUSG00000000934.10	ENSMUST00000000958.9	1903	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTGTCACTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	75550639	75528883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75529064_75529532_75529680_75535204_75535300_75535863_75535992_75537435_75537551_75538101_75538171_75539268_75539455_75539670_75539815_75540474_75540620_75541135_75541324_75541910_75542034_75546140_75546263_75547867_75547981_75550501
ENSMUSG00000000938.12_0	chr6	-	2550	2	FSM	ENSMUSG00000000938.12	ENSMUST00000125581.2	2565	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGCTTTTTAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	52211910	52208182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52209761_52210938
ENSMUSG00000000938.12_1	chr6	-	1536	2	FSM	ENSMUSG00000000938.12	ENSMUST00000121043.2	1436	2	-24	-76	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTTAAATGAAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	52217858	52208825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52209761_52217257
ENSMUSG00000000957.12_0	chr14	+	2560	10	FSM	ENSMUSG00000000957.12	ENSMUST00000089688.6	2596	10	11	25	-10	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	3135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAGAAAGAAAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54669079	54678697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54669431_54673201_54673351_54673594_54673718_54674071_54674380_54675057_54675220_54676121_54676283_54676467_54676607_54676737_54676889_54677361_54677478_54677797
ENSMUSG00000000958.11_0	chr14	-	2212	11	FSM	ENSMUSG00000000958.11	ENST00000555702.5	2223	11	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54651489	54606900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646504_54647534_54647677_54651336
ENSMUSG00000000958.11_3	chr14	-	2228	11	ISM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	936	0	916	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGAGTGGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54654220	54606900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045
ENSMUSG00000000958.11_4	chr14	-	2270	12	FSM	ENSMUSG00000000958.11	ENSMUST00000197440.5	2278	12	0	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCCTAAGGTCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54655156	54606908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54607344_54607549_54607734_54610396_54610547_54611298_54611396_54611670_54611775_54612004_54612129_54615222_54615368_54616452_54616579_54645959_54646506_54651336_54651471_54654045_54654228_54655113
ENSMUSG00000000959.8_0	chr14	+	2529	10	FSM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	4	5	4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGCAAGTTCAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54598301	54607125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54598375_54598778_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_6	chr14	+	2458	9	ISM	ENSMUSG00000000959.8	ENSMUST00000000985.7	2538	10	480	4	480	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAAGTTCAGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	54598777	54607126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_54598926_54600738_54600953_54604165_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605609_54605691_54605774
ENSMUSG00000000959.8_8	chr14	+	828	6	FSM	ENSMUSG00000000959.8	ENST00000412791.5	839	6	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCTCCACACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	54604173	54605947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54604310_54604481_54604568_54604722_54604888_54605044_54605150_54605249_54605413_54605774
ENSMUSG00000000976.14_0	chr11	+	5599	20	FSM	ENSMUSG00000000976.14	ENSMUST00000001002.8	5614	20	13	2	13	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGGTTTCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	83644534	83674578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83644768_83646535_83646644_83648135_83648277_83649114_83649231_83650129_83650245_83651724_83651827_83655711_83655850_83656678_83656987_83657903_83658082_83659881_83660089_83660493_83660594_83663070_83663427_83664695_83664819_83665247_83665335_83666526_83666662_83667439_83667563_83668063_83668189_83669670_83669768_83670226_83670432_83671976
ENSMUSG00000001014.7_0	chr9	+	1003	2	FSM	ENSMUSG00000001014.7	ENSMUST00000215077.2	1028	2	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTGCCTTACGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	20940773	20941889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20941120_20941232
ENSMUSG00000001016.13_0	chr3	+	2013	14	FSM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	90383460	90395679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90383553_90384311_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001016.13_7	chr3	+	1923	13	ISM	ENSMUSG00000001016.13	ENSMUST00000001042.10	2027	14	856	7	856	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACCAGTACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	90384309	90395679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90384372_90384626_90384670_90387910_90388016_90388299_90388378_90388670_90388774_90390083_90390150_90391760_90391878_90392996_90393076_90393491_90393580_90394157_90394220_90394289_90394405_90394533_90394625_90394765
ENSMUSG00000001017.16_0	chr3	-	3232	5	FSM	ENSMUSG00000001017.16	ENSMUST00000001043.14	3257	5	16	9	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90416742	90406271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90414934_90416497
ENSMUSG00000001017.16_12	chr3	-	1308	5	FSM	ENSMUSG00000001017.16	ENSMUST00000107346.8	1321	5	7	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAGTTCTACATCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90416774	90406806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90407415_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001017.16_14	chr3	-	1999	6	FSM	ENSMUSG00000001017.16	ENSMUST00000049937.13	2012	6	13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90416792	90406271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90407415_90409422_90409561_90410402_90410590_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001017.16_39	chr3	-	1087	4	FSM	ENSMUSG00000001017.16	ENST00000368687.1	1095	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGGTTGAGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90413766	90407001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90407415_90409422_90409561_90410402_90410587_90413414
ENSMUSG00000001017.16_4	chr3	-	1825	5	FSM	ENSMUSG00000001017.16	ENSMUST00000076639.11	1842	5	10	7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAACCCAGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90416759	90406271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90407415_90410402_90410587_90413414_90413569_90414851_90414934_90416497
ENSMUSG00000001018.16_0	chr3	-	1912	4	FSM	ENSMUSG00000001018.16	ENSMUST00000149884.2	1928	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAATTCTACTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	90398329	90395345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90396901_90397460_90397580_90397854_90397902_90398138
ENSMUSG00000001020.9_0	chr3	+	489	3	FSM	ENSMUSG00000001020.9	ENSMUST00000001046.7	498	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTAGCTGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90511077	90513343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90511114_90512303_90512460_90513046
ENSMUSG00000001021.14_0	chr3	+	712	3	FSM	ENSMUSG00000001021.14	ENSMUST00000001047.8	712	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTTTGTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90507521	90510009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90507576_90509086_90509233_90509497
ENSMUSG00000001021.14_1	chr3	+	656	2	ISM	ENSMUSG00000001021.14	ENSMUST00000001047.8	712	3	1567	0	1567	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTACTTTTGTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90509088	90510009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90509233_90509497
ENSMUSG00000001023.11_0	chr3	+	368	2	FSM	ENSMUSG00000001023.11	ENST00000368718.5	391	2	11	12	11	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAATAAAGCCTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	90517141	90519061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90517269_90518820
ENSMUSG00000001023.11_1	chr3	+	379	2	FSM	ENSMUSG00000001023.11	ENSMUST00000001049.5	422	2	14	29	0	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAGAAATAAAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	90517130	90519058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90517269_90518817
ENSMUSG00000001025.9_0	chr3	+	715	3	FSM	ENSMUSG00000001025.9	ENSMUST00000001051.9	731	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTACTCATGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90520198	90521715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90520534_90521049_90521212_90521497
ENSMUSG00000001025.9_2	chr3	+	456	3	FSM	ENSMUSG00000001025.9	ENSMUST00000198128.2	464	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTACTCATGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90520613	90521715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90520690_90521049_90521212_90521497
ENSMUSG00000001034.18_0	chr11	-	3002	7	FSM	ENSMUSG00000001034.18	ENSMUST00000079080.13	3019	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	61385112	61379644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384472_61384781_61384905
ENSMUSG00000001034.18_1	chr11	-	3229	6	FSM	ENSMUSG00000001034.18	ENSMUST00000101085.9	3254	6	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	61385074	61379644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381532_61382513_61383729_61384012_61384349
ENSMUSG00000001034.18_2	chr11	-	3053	7	FSM	ENSMUSG00000001034.18	ENSMUST00000108714.2	3069	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACTCTGCGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	61385113	61379644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61380097_61380189_61380324_61380674_61381331_61381433_61382513_61383729_61383896_61384422_61384781_61384905
ENSMUSG00000001036.18_0	chr11	-	4444	11	FSM	ENSMUSG00000001036.18	ENSMUST00000179936.8	4452	11	2	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61470511	61408081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61456647_61456721_61470392
ENSMUSG00000001036.18_15	chr11	-	1752	8	FSM	ENSMUSG00000001036.18	ENST00000571254.1	1768	8	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACCAGGTGGGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	61437611	61410245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423498_61424414_61424508_61426096_61426210_61436975
ENSMUSG00000001036.18_2	chr11	-	4449	11	FSM	ENSMUSG00000001036.18	ENSMUST00000108712.8	4458	11	2	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61470493	61408081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424414_61424508_61426096_61426210_61434983_61435155_61436975_61437738_61438695_61438810_61470392
ENSMUSG00000001036.18_4	chr11	-	4190	9	FSM	ENSMUSG00000001036.18	ENSMUST00000108713.8	4207	9	10	7	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61470501	61408081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61426096_61426210_61436975_61437738_61470392
ENSMUSG00000001036.18_5	chr11	-	4222	10	FSM	ENSMUSG00000001036.18	ENSMUST00000001063.15	4243	10	14	7	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61470497	61408081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61470392
ENSMUSG00000001036.18_6	chr11	-	4305	11	FSM	ENSMUSG00000001036.18	ENSMUST00000178202.8	4317	11	6	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGATGTGGGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	61470507	61408081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61410534_61412484_61412701_61413231_61413319_61413854_61414020_61423343_61423519_61424396_61424508_61425403_61425440_61426096_61426210_61436975_61437738_61456647_61456721_61470392
ENSMUSG00000001039.13_0	chr11	+	800	7	FSM	ENSMUSG00000001039.13	ENSMUST00000102657.10	817	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTCTGGGGCCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	61395980	61403751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61396098_61397169_61397239_61398453_61398566_61399897_61399995_61400295_61400359_61403197_61403266_61403477
ENSMUSG00000001052.16_0	chr3	-	5110	24	FSM	ENSMUSG00000001052.16	ENSMUST00000001079.15	5128	24	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTGTGGAGTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	129854544	129776413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129814186_129814292_129827479_129827624_129834322_129835097_129854217
ENSMUSG00000001052.16_8	chr3	-	3725	23	FSM	ENSMUSG00000001052.16	ENST00000399100.6	3737	23	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACATCAGCAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	129854367	129777546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129777656_129777815_129777920_129781335_129781429_129782544_129782650_129783297_129783436_129783943_129784120_129784979_129785091_129786623_129786798_129787378_129787538_129787917_129788042_129789562_129789770_129789989_129790046_129790329_129790449_129793160_129793274_129795953_129796064_129796588_129796716_129798642_129798746_129801059_129801245_129803310_129803544_129805440_129805522_129827479_129827654_129834322_129835097_129854217
ENSMUSG00000001053.16_0	chr11	-	2362	5	FSM	ENSMUSG00000001053.16	ENSMUST00000001080.16	2367	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAGGAATGTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	51541664	51533889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51534976_51535101_51535357_51535999_51536513_51536753_51537102_51541504
ENSMUSG00000001054.10_0	chr11	-	1935	10	FSM	ENSMUSG00000001054.10	ENSMUST00000001081.10	1946	10	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGATTGCATGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51526712	51514499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51514974_51515055_51515211_51515301_51515405_51516495_51516662_51517562_51517730_51517825_51517927_51518448_51518590_51518706_51518853_51520302_51520489_51526416
ENSMUSG00000001056.4_0	chr11	+	1019	4	FSM	ENSMUSG00000001056.4	ENSMUST00000127405.2	1042	4	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTATAAAACAGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	51510571	51514528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51510805_51510908_51510979_51513311_51513418_51513918
ENSMUSG00000001062.19_0	chr8	-	2936	15	FSM	ENSMUSG00000001062.19	ENSMUST00000122363.8	2952	15	10	6	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGAAGTCCATGTGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	123981077	123969100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123969929_123970426_123970532_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ENSMUSG00000001062.19_5	chr8	-	2686	15	FSM	ENSMUSG00000001062.19	ENSMUST00000118279.2	2696	15	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTACCGAAGTCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	123980829	123969105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123969929_123970426_123970535_123971852_123971950_123972245_123972452_123972682_123972813_123973463_123973949_123974452_123974539_123974705_123974794_123974892_123974946_123975352_123975416_123975500_123975613_123977416_123977580_123977665_123977759_123979343_123979420_123980726
ENSMUSG00000001065.16_0	chr8	+	4052	11	FSM	ENSMUSG00000001065.16	ENSMUST00000001092.15	4071	11	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCAGAGTTGTTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	123980952	123996484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123981663_123982445_123982750_123983022_123983070_123983157_123983605_123985049_123985129_123986169_123986254_123991554_123991666_123991733_123991810_123992052_123992171_123994338_123994439_123994508
ENSMUSG00000001082.13_0	chr5	-	1889	13	FSM	ENSMUSG00000001082.13	ENSMUST00000001109.11	1907	13	11	7	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTTTCCGTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	34794522	34790992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794270
ENSMUSG00000001082.13_2	chr5	-	1738	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114331.10	1754	13	10	6	-10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGTGCCTTTCCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34794546	34790995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794128_34794442
ENSMUSG00000001082.13_3	chr5	-	1888	13	FSM	ENSMUSG00000001082.13	ENSMUST00000114329.8	1906	13	15	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGTGCCTTTCCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34794521	34790995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34791359_34791474_34791565_34791636_34791685_34791766_34791858_34791934_34792044_34792194_34792307_34792394_34792504_34792713_34792876_34792952_34793112_34793364_34793469_34793753_34793851_34793937_34794131_34794270
ENSMUSG00000001089.15_0	chr4	+	7520	5	FSM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136197075	136276624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136197162_136248651_136248755_136266435_136266528_136267666_136270830_136272548
ENSMUSG00000001089.15_2	chr4	+	7428	4	FSM	ENSMUSG00000001089.15	ENSMUST00000105849.9	7438	4	4	6	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136197075	136276624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136197162_136248651_136248755_136267666_136270830_136272548
ENSMUSG00000001089.15_3	chr4	+	7344	3	ISM	ENSMUSG00000001089.15	ENSMUST00000063021.7	3775	4	-56	-2919	-56	-2	intron_retention	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136248649	136276624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_136248755_136267666_136270830_136272548
ENSMUSG00000001089.15_4	chr4	+	7436	4	ISM	ENSMUSG00000001089.15	ENSMUST00000170102.8	7526	5	51578	2	-56	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136248649	136276624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_136248755_136266435_136266528_136267666_136270830_136272548
ENSMUSG00000001089.15_6	chr4	+	7216	2	FSM	ENSMUSG00000001089.15	ENSMUST00000001116.5	7246	2	25	5	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGCTCCTTTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136267689	136276624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136270830_136272548
ENSMUSG00000001089.15_7	chr4	+	7139	3	FSM	ENSMUSG00000001089.15	ENST00000418342.5	7150	3	8	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAATTTCTGGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	136267676	136276659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136270830_136272548_136274129_136274253
ENSMUSG00000001098.16_0	chr5	-	3081	7	FSM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	16	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACGCCGCCTTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114518553	114501633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956_114513171_114518486
ENSMUSG00000001098.16_1	chr5	-	1320	6	ISM	ENSMUSG00000001098.16	ENSMUST00000102581.11	3103	7	5401	1698	5359	357	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGAGGAACTGCGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	114513168	114503325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_114503928_114505269_114505466_114506402_114506456_114507001_114507089_114508119_114508290_114512956
ENSMUSG00000001100.11_0	chr11	+	2040	11	FSM	ENSMUSG00000001100.11	ENSMUST00000001127.11	2054	11	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTTCTGAGTATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	78403028	78413558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78403299_78404745_78404828_78405913_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001100.11_6	chr11	+	1368	11	FSM	ENSMUSG00000001100.11	ENST00000618887.2	1379	11	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGAACTCTTAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	78403133	78413045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78403299_78404745_78404828_78405967_78406012_78407644_78407742_78408378_78408455_78408650_78408759_78408898_78409036_78409778_78409806_78410005_78410132_78411977_78412058_78412619
ENSMUSG00000001105.16_0	chr11	+	1127	6	FSM	ENSMUSG00000001105.16	ENSMUST00000128788.8	1141	6	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGTGTGCATTATT	NA	NA	NA	NA	NA	NA	NA	NA	78427199	78432562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78427403_78429335_78429565_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUSG00000001105.16_4	chr11	+	535	5	FSM	ENSMUSG00000001105.16	ENSMUST00000108275.2	582	5	23	24	23	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAGGCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78427291	78432291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78427403_78429659_78429789_78430785_78430872_78431720_78431825_78432186
ENSMUSG00000001119.8_0	chr10	-	4079	34	NIC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	76561990	76544625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549018_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ENSMUSG00000001119.8_1	chr10	-	4080	34	NNC	ENSMUSG00000001119.8	novel	4100	35	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCCTCTTTATCTACA	NA	NA	NA	NA	NA	NA	NA	NA	76561987	76544625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_-_76546016_76546179_76546210_76546795_76546974_76547116_76547301_76547408_76547519_76548101_76548236_76549014_76549056_76549459_76549496_76549706_76549773_76549947_76550011_76550247_76550284_76550491_76550543_76550828_76550892_76551104_76551168_76552094_76552158_76552552_76552616_76552962_76552999_76553095_76553150_76553233_76553297_76553628_76553692_76553892_76553947_76554206_76554252_76554350_76554378_76554812_76554840_76554958_76555004_76555456_76555511_76556794_76556840_76556921_76556943_76557096_76557118_76557236_76557366_76557649_76557810_76559209_76559411_76560772_76560903_76561653
ENSMUSG00000001120.16_0	chr10	-	1963	15	ISM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	69141	0	-66778	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	76728481	76597690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390
ENSMUSG00000001120.16_1	chr10	-	2013	16	FSM	ENSMUSG00000001120.16	ENSMUST00000001148.11	2013	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTGACTTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	76797622	76597690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593_76636749_76661693_76661827_76728390_76728491_76797581
ENSMUSG00000001120.16_12	chr10	-	1131	12	ISM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	7	721	7	-721	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAATTCCTCGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	76636743	76599054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593
ENSMUSG00000001120.16_5	chr10	-	1042	12	FSM	ENSMUSG00000001120.16	ENST00000400310.5	1056	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGGTCCTCCACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	76636741	76598320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606794_76606874_76617665_76617708_76620973_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593
ENSMUSG00000001120.16_7	chr10	-	1150	13	FSM	ENSMUSG00000001120.16	ENST00000449640.5	1164	13	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGTGCACTCTAACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	76636741	76598338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76598361_76599055_76599226_76603697_76603751_76606093_76606154_76606794_76606871_76617665_76617708_76620904_76621049_76624224_76624354_76625571_76625704_76633628_76633746_76634460_76634494_76635362_76635387_76636593
ENSMUSG00000001123.16_0	chr11	-	1501	10	FSM	ENSMUSG00000001123.16	ENSMUST00000108268.10	1520	10	10	9	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACACATGTGAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	78875762	78853808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78854368_78856517_78856681_78856823_78856913_78857702_78857745_78858269_78858321_78858823_78858860_78862142_78862254_78863813_78864016_78867438_78867528_78875603
ENSMUSG00000001123.16_7	chr11	-	691	4	FSM	ENSMUSG00000001123.16	ENST00000581545.5	705	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATAAGGGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78864003	78854205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78854368_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001123.16_8	chr11	-	862	5	FSM	ENSMUSG00000001123.16	ENST00000583322.5	868	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGATAAGGGCTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	78864011	78854205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78854368_78856517_78856681_78856823_78856997_78862087_78862254_78863813
ENSMUSG00000001127.13_0	chrX	+	2357	16	FSM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	1	0	1	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	20714782	20726758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_11	chrX	+	2279	15	ISM	ENSMUSG00000001127.13	ENSMUST00000001155.11	2358	16	1386	0	1351	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGCTTGTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	20716167	20726758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168_20718268_20719556_20719699_20719798_20719827_20719915_20720056_20720151_20720355_20723850_20724028_20724116_20724164_20724632_20724752_20724980_20725113_20725923_20726059_20726217
ENSMUSG00000001127.13_12	chrX	+	1461	5	FSM	ENSMUSG00000001127.13	ENSMUST00000122312.8	2854	5	1372	21	1360	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTACCCTTTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	20716176	20719122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUSG00000001127.13_7	chrX	+	1514	6	FSM	ENSMUSG00000001127.13	ENSMUST00000120356.8	1520	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTACCCTTTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	20714816	20719122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20714859_20716165_20716322_20716483_20716588_20717704_20717808_20717896_20718052_20718168
ENSMUSG00000001131.12_0	chrX	+	864	6	FSM	ENSMUSG00000001131.12	ENSMUST00000115342.10	883	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCAGCAATATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20736415	20740964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20736564_20737272_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUSG00000001131.12_1	chrX	+	817	6	FSM	ENSMUSG00000001131.12	ENSMUST00000009530.5	833	6	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAGCAATATTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20736467	20740966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20736564_20737269_20737402_20739015_20739096_20739288_20739416_20739606_20739732_20740709
ENSMUSG00000001134.10_0	chrX	-	873	7	FSM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAGATTCAATTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	20828256	20817902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918_20828026_20828172
ENSMUSG00000001134.10_1	chrX	-	787	6	ISM	ENSMUSG00000001134.10	ENSMUST00000123836.2	875	7	233	2	233	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGAGATTCAATTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	20828023	20817902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_20818263_20818446_20818511_20825596_20825705_20825973_20826042_20826176_20826259_20827918
ENSMUSG00000001138.14_0	chr1	+	5180	8	FSM	ENSMUSG00000001138.14	ENSMUST00000001166.14	5193	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAATTTTCCATTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36550954	36567312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36564246
ENSMUSG00000001138.14_1	chr1	+	5254	9	FSM	ENSMUSG00000001138.14	ENSMUST00000097776.4	5292	9	32	6	32	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAATTTTCCATTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36550979	36567312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36552235_36558032_36558177_36559158_36559309_36559599_36559770_36559899_36559997_36560285_36560420_36560781_36560921_36563114_36563214_36564246
ENSMUSG00000001143.14_0	chr1	-	3358	8	FSM	ENSMUSG00000001143.14	ENSMUST00000125304.8	3378	8	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTCTGCTCTTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36484339	36461152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUSG00000001143.14_1	chr1	-	2279	9	FSM	ENSMUSG00000001143.14	ENSMUST00000115011.8	2290	9	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACTCATGAGTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36484350	36462275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36463585_36463918_36464039_36467182_36467298_36467380_36467543_36468503_36468537_36477830_36477914_36478689_36478808_36482571_36482691_36484130
ENSMUSG00000001150.8_0	chr10	+	6408	29	FSM	ENSMUSG00000001150.8	ENSMUST00000170795.3	6427	29	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTCCAGAGCCGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	76304769	76351681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76305049_76305782_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348403_76351415
ENSMUSG00000001150.8_10	chr10	+	5933	28	FSM	ENSMUSG00000001150.8	ENST00000397708.1	5948	28	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGAGACGGATCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	76305875	76351581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76307087_76307256_76307484_76312347_76312427_76312616_76312759_76313553_76313745_76316834_76316975_76318457_76318656_76318948_76319218_76320487_76320651_76324175_76324337_76325168_76325411_76325701_76325902_76326561_76326663_76328694_76328827_76329263_76329378_76332241_76332395_76335289_76335488_76336895_76336965_76337043_76337179_76338485_76338640_76339996_76340256_76340463_76340562_76342131_76342523_76343123_76343382_76344131_76344262_76346853_76347058_76348251_76348413_76351428
ENSMUSG00000001151.11_0	chr10	-	9321	42	FSM	ENSMUSG00000001151.11	ENSMUST00000217838.2	9341	42	17	3	17	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTCCTGGCTACAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	76278603	76187099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76216050_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ENSMUSG00000001151.11_3	chr10	-	9319	42	FSM	ENSMUSG00000001151.11	ENSMUST00000001179.7	9331	42	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCTTCTCCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	76278553	76187105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76187614_76188742_76188871_76190006_76190146_76190892_76190970_76191997_76192231_76192868_76192989_76203141_76203316_76204564_76204668_76205668_76205914_76210684_76211135_76215738_76215890_76215996_76216274_76217066_76217260_76217853_76218022_76220574_76220740_76221537_76221705_76223260_76223364_76224685_76225367_76228027_76228874_76235689_76235861_76237165_76237370_76239457_76239479_76239591_76239709_76240255_76240486_76244531_76244745_76245301_76245465_76247359_76247593_76247854_76248007_76248331_76248484_76254193_76254401_76255811_76256377_76258601_76259060_76262718_76262807_76263646_76263888_76265033_76265146_76268837_76268975_76269440_76269616_76269818_76269875_76272259_76272516_76272978_76273051_76275976_76276190_76278398
ENSMUSG00000001155.14_0	chr10	+	1185	10	FSM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCTAGAAGCCCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	76415620	76425120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76415706_76415823_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134_76423274_76423903_76424000_76425059
ENSMUSG00000001155.14_3	chr10	+	1102	9	ISM	ENSMUSG00000001155.14	ENST00000397743.1	1192	10	208	0	208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGCCTAGAAGCCCGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	76415821	76425120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_76416004_76417128_76417267_76417336_76417469_76419644_76419707_76420003_76420134_76420365_76420528_76423134_76423274_76423903_76424000_76425059
ENSMUSG00000001156.10_0	chr6	-	4643	6	FSM	ENSMUSG00000001156.10	ENSMUST00000001184.10	4666	6	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTAAACATTGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	86646131	86624034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86628062_86628423_86628584_86630066_86630182_86640052_86640083_86645519_86645617_86645917
ENSMUSG00000001157.14_0	chr6	-	2926	14	FSM	ENSMUSG00000001157.14	ENSMUST00000001185.14	2949	14	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATATGCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	86710350	86668757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86670034_86674430_86674519_86677493_86677640_86681480_86681557_86684384_86684455_86687496_86687635_86688570_86688662_86691156_86691242_86694367_86694434_86694973_86695087_86698322_86698421_86699550_86699648_86703054_86703179_86709892
ENSMUSG00000001158.14_0	chr6	-	882	6	FSM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGACTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	86661502	86652133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837_86659959_86661428
ENSMUSG00000001158.14_1	chr6	-	809	5	ISM	ENSMUSG00000001158.14	ENSMUST00000001186.11	885	6	1545	1	0	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGACTTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	86659959	86652133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_86652563_86653203_86653269_86657888_86657969_86658572_86658686_86659837
ENSMUSG00000001158.14_5	chr6	-	487	4	FSM	ENSMUSG00000001158.14	ENST00000409116.5	504	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGACACCCAGTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	86659950	86652381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86652563_86657888_86657969_86658572_86658686_86659837
ENSMUSG00000001173.16_1	chrX	+	4911	22	FSM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	47001854	47054741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47001926_47005351_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUSG00000001173.16_7	chrX	+	4840	21	ISM	ENSMUSG00000001173.16	ENST00000357121.5	4916	22	3498	4	3498	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATTGTGATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	47005351	47054741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_47005432_47009037_47009077_47019247_47019359_47019774_47019862_47020452_47020574_47020660_47020823_47022250_47022353_47023721_47023837_47024966_47025084_47025177_47025366_47027175_47027288_47029985_47030096_47032382_47032519_47035879_47035991_47036583_47036750_47037001_47037238_47049329_47049447_47050253_47050339_47050956_47051085_47052017_47052130_47052336
ENSMUSG00000001175.17_0	chr12	+	4099	6	FSM	ENSMUSG00000001175.17	ENSMUST00000110082.11	4115	6	10	6	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTAACTGTGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	100165703	100176067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100165976_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001175.17_10	chr12	+	1056	6	FSM	ENSMUSG00000001175.17	ENST00000447653.8	1070	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAACTGAAAAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100165798	100173045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100166050_100168651_100168683_100169833_100169978_100171871_100171979_100172356_100172493_100172658
ENSMUSG00000001211.16_0	chr10	-	5959	10	FSM	ENSMUSG00000001211.16	ENSMUST00000001240.12	5980	10	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATGAGAAAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	78188268	78105024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78188046
ENSMUSG00000001211.16_10	chr10	-	1309	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105387.8	1316	9	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGCGAGGGAAAGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	78131226	78109449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78131168
ENSMUSG00000001211.16_2	chr10	-	3425	10	FSM	ENSMUSG00000001211.16	ENSMUST00000166360.8	3439	10	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTCAGAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	78187530	78107406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460
ENSMUSG00000001211.16_3	chr10	-	3659	9	FSM	ENSMUSG00000001211.16	ENSMUST00000105389.8	3678	9	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTCAGAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	78134023	78107406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78133658
ENSMUSG00000001211.16_5	chr10	-	3500	11	FSM	ENSMUSG00000001211.16	ENSMUST00000105390.8	3513	11	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTCAGAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	78187696	78107406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187636
ENSMUSG00000001211.16_6	chr10	-	3662	11	FSM	ENSMUSG00000001211.16	ENSMUST00000105388.8	3681	11	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTCAGAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	78187878	78107406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78109610_78109905_78110105_78113843_78113920_78118207_78118311_78118928_78119083_78120022_78120185_78120828_78120999_78123680_78123908_78165109_78165171_78187460_78187546_78187656
ENSMUSG00000001228.15_0	chr17	+	3573	17	FSM	ENSMUSG00000001228.15	ENSMUST00000001258.15	3586	17	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56610332	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_16	chr17	+	3320	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	773	1	738	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56612085	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_17	chr17	+	3337	16	ISM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	745	1	745	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56612092	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_4	chr17	+	3476	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113038.8	3483	17	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56610405	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56610562_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_6	chr17	+	3394	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113035.8	3402	17	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56611319	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620064_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001228.15_8	chr17	+	3390	17	FSM	ENSMUSG00000001228.15	ENSMUST00000113039.9	3391	17	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCGCACGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56611347	56630485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56611394_56612085_56612251_56616336_56616580_56617675_56617837_56619053_56619270_56619863_56619968_56620040_56620252_56622191_56622316_56622398_56622507_56622776_56622882_56624003_56624111_56624990_56625151_56625246_56625385_56627161_56627283_56627396_56627543_56629020_56629126_56629355
ENSMUSG00000001229.10_0	chr17	-	3367	21	FSM	ENSMUSG00000001229.10	ENSMUST00000038794.6	3374	21	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAGTAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	56525882	56493816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56494462_56495267_56495380_56496322_56496466_56496989_56497143_56497684_56497832_56498013_56498160_56501415_56501552_56501907_56502061_56503087_56503168_56505971_56506135_56506255_56506434_56507582_56507684_56509840_56509903_56511171_56511301_56512193_56512308_56512452_56512622_56512696_56512871_56513776_56513890_56518579_56518834_56524408_56524462_56525740
ENSMUSG00000001240.14_0	chr11	+	1170	4	FSM	ENSMUSG00000001240.14	ENSMUST00000129680.8	1178	4	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATATTGCCTTCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	101136857	101139072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101137399_101137880_101137971_101138411_101138515_101138636
ENSMUSG00000001240.14_1	chr11	+	1094	6	FSM	ENSMUSG00000078656.12	ENSMUST00000042477.13	1106	6	8	4	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	101144540	101150371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUSG00000001240.14_2	chr11	+	1001	5	FSM	ENSMUSG00000078656.12	ENSMUST00000121331.2	790	5	278	-489	278	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCGGCCTGTTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	101144856	101150371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUSG00000001248.16_0	chr7	-	2528	18	NIC	ENSMUSG00000001248.16	novel	2543	19	NA	NA	6	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTATGGCTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	30850433	30829558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUSG00000001248.16_1	chr7	-	2694	19	FSM	ENSMUSG00000001248.16	ENSMUST00000001280.14	2713	19	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCTATGGCTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	30850495	30829558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30830010_30831965_30832087_30832182_30832291_30833415_30833504_30833582_30833757_30833838_30833943_30835021_30835165_30835247_30835367_30837538_30837683_30838176_30838376_30838821_30838973_30839181_30839295_30840554_30840636_30841792_30841889_30841975_30842080_30842228_30842314_30842971_30842993_30843081_30843299_30850320
ENSMUSG00000001249.15_0	chr7	-	1101	7	FSM	ENSMUSG00000001249.15	ENST00000597419.1	1111	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAAGGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30814158	30798178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802924_30803055_30814102
ENSMUSG00000001249.15_1	chr7	-	1040	6	ISM	ENSMUSG00000001249.15	ENST00000597419.1	1111	7	11109	10	7373	-10	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAAGGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30803049	30798178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30798499_30798639_30798805_30798930_30799074_30799230_30799327_30801902_30802094_30802924
ENSMUSG00000001260.11_0	chr5	-	1397	8	FSM	ENSMUSG00000001260.11	ENST00000295452.5	1416	8	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAATAAGATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	70973442	70911259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_70911635_70931609_70931826_70934460_70934614_70935404_70935543_70937992_70938076_70939588_70939810_70951988_70952057_70973299
ENSMUSG00000001270.10_0	chr12	-	1459	8	FSM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	111638760	111635795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199_111638408_111638663
ENSMUSG00000001270.10_2	chr12	-	1363	7	ISM	ENSMUSG00000001270.10	ENSMUST00000001304.9	1472	8	364	1	364	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGAGTGTTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	111638408	111635795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_111636176_111636258_111636449_111636595_111636720_111637306_111637479_111637648_111637782_111637858_111638014_111638199
ENSMUSG00000001280.14_0	chr15	+	7480	7	FSM	ENSMUSG00000001280.14	ENST00000327443.9	7497	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCATGTCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	102314745	102344817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159_102342421_102342741
ENSMUSG00000001280.14_1	chr15	+	7753	6	FSM	ENSMUSG00000001280.14	ENSMUST00000001326.7	7754	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGAGTGTTGGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	102314814	102344838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102314858_102316206_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159
ENSMUSG00000001280.14_2	chr15	+	7360	6	FSM	ENSMUSG00000001280.14	ENST00000426431.2	7375	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCATGTCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	102316214	102344817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102316368_102316650_102318155_102334065_102334232_102338391_102338592_102339159_102342421_102342741
ENSMUSG00000001281.11_0	chr15	-	2677	15	FSM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGAGCCTCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	102140376	102124432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832_102136037_102140285
ENSMUSG00000001281.11_1	chr15	-	2586	14	ISM	ENSMUSG00000001281.11	ENSMUST00000001327.11	2683	15	4343	3	-28	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGAGCCTCTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	102136036	102124432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102124703_102124906_102125068_102125326_102125533_102125681_102125902_102126208_102126433_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832
ENSMUSG00000001281.11_3	chr15	-	1958	12	FSM	ENSMUSG00000001281.11	ENST00000550743.6	1981	12	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTGGAGATAGAAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	102135992	102124572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102124703_102124906_102125068_102125326_102125533_102126931_102127126_102127608_102127756_102130523_102130614_102130776_102130873_102131075_102131235_102131765_102132008_102132736_102132908_102132992_102133195_102135832
ENSMUSG00000001285.13_0	chr15	+	1459	7	FSM	ENSMUSG00000001285.13	ENSMUST00000113682.9	1480	7	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATAGAAACCACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	102240152	102246562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245266_102245420_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001285.13_1	chr15	+	880	6	FSM	ENSMUSG00000001285.13	ENST00000548632.5	893	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGCCCAGCACCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102240241	102246225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102240389_102240524_102240638_102242636_102242797_102245535_102245659_102245763_102245946_102246070
ENSMUSG00000001288.16_0	chr15	-	2939	10	FSM	ENSMUSG00000001288.16	ENSMUST00000043172.15	2953	10	6	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAATCCGGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	102165946	102143380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102160853_102161180_102164904_102164975_102165674
ENSMUSG00000001288.16_1	chr15	-	2704	8	FSM	ENSMUSG00000001288.16	ENSMUST00000063339.14	2718	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAATCCGGGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	102154927	102143380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102144659_102147239_102147399_102147824_102148030_102148292_102148470_102148562_102148724_102149492_102149635_102150270_102150420_102154494
ENSMUSG00000001289.13_0	chr15	+	1050	6	FSM	ENSMUSG00000001289.13	ENSMUST00000166658.8	1062	6	12	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCGGGACGCACAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	102234562	102240308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102234696_102234867_102234971_102235252_102235285_102236956_102237032_102237146_102237253_102239707
ENSMUSG00000001289.13_3	chr15	+	528	5	FSM	ENSMUSG00000001289.13	ENST00000549759.2	545	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGAGTGAGGGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	102234571	102239802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102234696_102234867_102234971_102236931_102237032_102237146_102237253_102239707
ENSMUSG00000001300.17_0	chr8	-	4765	5	FSM	ENSMUSG00000001300.17	ENSMUST00000001319.15	4793	5	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAAGCGCCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	8711223	8667442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_8670977_8672330_8672445_8673147_8673241_8689205_8689490_8710483
ENSMUSG00000001305.6_0	chr1	-	1297	5	FSM	ENSMUSG00000001305.6	ENSMUST00000001339.6	1321	5	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATTTCAAATTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	186481541	186453184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_186453744_186468312_186468512_186469784_186469883_186471800_186472061_186481360
ENSMUSG00000001313.13_0	chr11	+	1377	5	FSM	ENSMUSG00000001313.13	ENSMUST00000001347.7	1394	5	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGGAAAACAGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	101359004	101362666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883
ENSMUSG00000001313.13_1	chr11	+	1317	7	FSM	ENSMUSG00000001313.13	ENST00000587250.4	1343	7	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAATAAACAACCAATT	NA	NA	NA	NA	NA	NA	NA	NA	101359046	101365264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101359266_101359758_101359847_101360838_101360949_101361543_101361679_101361883_101362129_101363246_101363321_101364818
ENSMUSG00000001323.18_0	chr11	-	3672	9	FSM	ENSMUSG00000001323.18	ENSMUST00000065211.9	3699	9	25	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACACACGATGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74816599	74797186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74810262_74810489_74816444
ENSMUSG00000001323.18_1	chr11	-	3167	8	FSM	ENSMUSG00000001323.18	ENSMUST00000121738.8	3183	8	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCATTTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	74816758	74797624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74799670_74799821_74800032_74800519_74800595_74801026_74801147_74801868_74801973_74802094_74802222_74803787_74803960_74816444
ENSMUSG00000001333.10_0	chr4	+	2017	5	FSM	ENSMUSG00000001333.10	ENSMUST00000102599.4	2042	5	10	15	-2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAACACCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129181419	129202337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129200420_129200498_129201834
ENSMUSG00000001333.10_18	chr4	+	1672	4	FSM	ENSMUSG00000001333.10	ENST00000373484.4	1692	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTGAGTGATGGATG	NA	NA	NA	NA	NA	NA	NA	NA	129181449	129202099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129201834
ENSMUSG00000001333.10_6	chr4	+	2051	5	FSM	ENSMUSG00000001333.10	ENST00000409190.8	2074	5	8	15	-8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129181429	129203582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129181582_129187019_129188170_129200134_129200260_129200420_129200449_129202986
ENSMUSG00000001334.10_1	chr4	+	2740	6	FSM	ENSMUSG00000001334.10	ENSMUST00000102600.4	2763	6	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAAGGCACATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	129030801	129038373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129030957_129032483_129032600_129033135_129033335_129033633_129033724_129035854_129035989_129036327
ENSMUSG00000001349.6_0	chr9	+	2366	7	FSM	ENSMUSG00000001349.6	ENSMUST00000001384.6	2381	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAACAAACAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	22010573	22020921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22010715_22012436_22012559_22015601_22015669_22016665_22016804_22016965_22017077_22019046_22019194_22019281
ENSMUSG00000001366.15_0	chr9	-	2139	13	FSM	ENSMUSG00000001366.15	ENSMUST00000085311.13	2155	13	9	7	9	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATATGTGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	78015929	77988787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUSG00000001366.15_16	chr9	-	1183	6	FSM	ENSMUSG00000001366.15	ENSMUST00000159099.8	1201	6	9	9	9	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCCCATCATTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	78015877	78002803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78015572
ENSMUSG00000001366.15_8	chr9	-	1846	13	FSM	ENSMUSG00000001366.15	ENSMUST00000001402.14	1850	13	0	4	0	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATATGTGTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	78016347	77988787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_77989371_77991784_77991937_77993188_77993283_77993556_77993653_77994455_77994547_77994751_77994871_78002426_78002542_78003149_78003281_78005627_78005728_78007069_78007128_78008809_78008969_78011552_78011637_78016283
ENSMUSG00000001376.18_0	chr6	+	3770	28	FSM	ENSMUSG00000001376.18	ENSMUST00000001412.17	3788	28	12	6	-10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGATTTGCTGTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3498393	3603525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_3498556_3504868_3504938_3516621_3516745_3517788_3517861_3519216_3519271_3520206_3520278_3522255_3522374_3522682_3522719_3524092_3524176_3532157_3532201_3533471_3533571_3536831_3536973_3545509_3545643_3551012_3551105_3554995_3555091_3555367_3555467_3562267_3562359_3565515_3565693_3567734_3567854_3571001_3571109_3578793_3578916_3588005_3588087_3592426_3592576_3594017_3594115_3594742_3594902_3598471_3598594_3600127_3600318_3602659
ENSMUSG00000001380.8_0	chr18	-	1967	13	FSM	ENSMUSG00000001380.8	ENSMUST00000001416.8	1989	13	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCTAACCTGTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36916244	36899588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732_36915823_36916063
ENSMUSG00000001380.8_11	chr18	-	1442	11	FSM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTGTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36915816	36899806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36915732
ENSMUSG00000001380.8_12	chr18	-	1796	11	FSM	ENSMUSG00000001380.8	ENST00000675204.1	1805	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTGTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36915814	36899806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572_36906669_36909229_36909350_36915732
ENSMUSG00000001380.8_14	chr18	-	1360	10	ISM	ENSMUSG00000001380.8	ENST00000438307.6	1449	11	9153	0	9153	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTGTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36906670	36899806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905310_36905437_36906572
ENSMUSG00000001380.8_18	chr18	-	1502	12	FSM	ENSMUSG00000001380.8	ENST00000457527.6	1509	12	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36915817	36899807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36900007_36900242_36900390_36901139_36901257_36903134_36903378_36903469_36903598_36903857_36903952_36904148_36904248_36904380_36904489_36905370_36905437_36906572_36906669_36909229_36909350_36915732
ENSMUSG00000001383.10_0	chr18	+	2298	6	FSM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCCACAGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	36926932	36932711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36927013_36927349_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUSG00000001383.10_1	chr18	+	2219	5	ISM	ENSMUSG00000001383.10	ENSMUST00000001419.10	2310	6	420	8	420	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGCCACAGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	36927348	36932711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_36927444_36928093_36928218_36929089_36929164_36929551_36929698_36930931
ENSMUSG00000001403.14_0	chr2	+	952	6	FSM	ENSMUSG00000001403.14	ENSMUST00000088248.13	967	6	10	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTTTTCTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	164611827	164614822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164612001_164612286_164612315_164613212_164613300_164613773_164613979_164614086_164614147_164614423
ENSMUSG00000001415.11_0	chr3	+	4435	22	FSM	ENSMUSG00000001415.11	ENSMUST00000001451.11	4448	22	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTCTGCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88243572	88269638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88243805_88249164_88249264_88249747_88249872_88250186_88250344_88252669_88252760_88253751_88253842_88254824_88254904_88256448_88256575_88256682_88256752_88257322_88257532_88258003_88258142_88258285_88258889_88260269_88260446_88261182_88261259_88261838_88262015_88262884_88263044_88265959_88266020_88266333_88266494_88266854_88266946_88267637_88267713_88268060_88268200_88268331
ENSMUSG00000001416.14_0	chr3	+	1961	14	FSM	ENSMUSG00000001416.14	ENSMUST00000001452.14	1977	14	10	6	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGACCGTTGTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	88204432	88229068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88204574_88206648_88206711_88208106_88208158_88208235_88208299_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUSG00000001416.14_20	chr3	+	1791	12	FSM	ENSMUSG00000001416.14	ENSMUST00000164166.8	1804	12	8	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGACCGTTGTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	88204488	88229068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88204574_88206648_88206711_88210074_88210172_88212319_88212438_88216467_88216655_88218979_88219130_88220548_88220682_88220862_88220945_88225652_88225834_88227766_88228013_88228320_88228453_88228750
ENSMUSG00000001418.14_0	chr3	+	4197	6	FSM	ENSMUSG00000001418.14	ENSMUST00000177005.8	4219	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTTTAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	88232340	88238609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88232509_88232983_88233239_88233421_88233620_88233717_88233937_88235163_88235421_88235509
ENSMUSG00000001419.18_0	chr3	+	5384	11	FSM	ENSMUSG00000001419.18	ENSMUST00000001455.13	5401	11	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCAGTTTGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88049692	88079390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344_88075652_88075938
ENSMUSG00000001419.18_1	chr3	+	3474	10	FSM	ENSMUSG00000001419.18	ENSMUST00000119251.8	3488	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTACAGATGAGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88049731	88077232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88049982_88062984_88063170_88063628_88063833_88065340_88065479_88066428_88066640_88066842_88066900_88068497_88068689_88070264_88070395_88074821_88075042_88075344
ENSMUSG00000001424.15_0	chr6	+	3464	24	FSM	ENSMUSG00000001424.15	ENSMUST00000001460.14	3482	24	12	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCGTGGTGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	28480358	28888825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_28480642_28512833_28512984_28520143_28520265_28523725_28523805_28526051_28526213_28526907_28527000_28527575_28527735_28528911_28529019_28531407_28531499_28545483_28545598_28626098_28626189_28668556_28668658_28707032_28707144_28724907_28724981_28745183_28745326_28795827_28795938_28874859_28875049_28880195_28880338_28883256_28883381_28884186_28884257_28884954_28885069_28886412_28886617_28888077_28888123_28888233
ENSMUSG00000001435.16_0	chr10	-	5041	42	FSM	ENSMUSG00000001435.16	ENSMUST00000081654.13	5063	42	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAACGCTTGGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	77002368	76888019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_77002123_77002195_77002272
ENSMUSG00000001435.16_5	chr10	-	4771	41	FSM	ENSMUSG00000001435.16	ENSMUST00000105409.8	4791	41	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATTTACAACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	76949532	76888862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76889242_76889988_76890105_76890617_76890816_76891412_76891662_76893202_76893236_76894532_76894665_76894938_76895013_76895091_76895237_76895728_76895858_76896202_76896247_76899812_76899876_76900370_76900414_76901068_76901138_76902783_76902859_76903212_76903267_76903465_76903493_76904223_76904299_76905269_76905333_76905653_76905681_76905783_76905814_76906794_76906885_76907144_76907181_76907437_76907510_76907860_76907897_76908775_76908803_76909573_76909637_76910183_76910316_76911981_76912009_76912992_76913056_76913517_76913677_76913832_76913887_76914109_76914188_76914290_76914354_76915094_76915122_76916512_76916699_76916982_76917060_76921100_76921231_76923209_76923264_76924703_76924791_76931824_76932370_76948792
ENSMUSG00000001436.16_0	chr10	+	2306	6	FSM	ENSMUSG00000001436.16	ENSMUST00000144234.8	2309	6	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGTTGTGAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	76868520	76886266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76868615_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001436.16_2	chr10	+	2332	6	FSM	ENSMUSG00000001436.16	ENSMUST00000105410.10	2347	6	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGTTGTGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	76869060	76886265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76869182_76874183_76874414_76877649_76878404_76878615_76878809_76880594_76880737_76885373
ENSMUSG00000001440.6_0	chr11	-	5882	22	FSM	ENSMUSG00000001440.6	ENSMUST00000001479.5	5894	22	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACATTTTGCTGCTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	97078699	97050543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97053508_97054178_97054341_97054739_97054855_97055550_97055657_97055778_97055923_97056201_97056310_97056872_97056956_97058375_97058521_97059690_97059763_97059973_97060122_97060727_97060859_97062347_97062540_97063878_97064104_97066574_97066677_97068071_97068183_97069095_97069186_97069693_97069754_97071269_97071423_97072450_97072652_97075752_97075936_97078214_97078274_97078371
ENSMUSG00000001441.14_0	chr11	-	4200	23	FSM	ENSMUSG00000001441.14	ENSMUST00000001480.14	4215	23	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAATTTGTTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97171455	97096675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97098095_97103105_97103154_97103857_97104014_97104596_97104705_97108616_97108674_97109333_97109477_97113776_97113997_97115484_97115620_97117554_97117695_97120655_97120720_97122714_97122825_97125880_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133428_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUSG00000001441.14_13	chr11	-	1158	11	FSM	ENSMUSG00000001441.14	ENST00000611212.1	1167	11	1	8	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACGTTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	97158501	97125878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383_97133630_97135253_97135362_97139083_97139150_97149099_97149178_97158420
ENSMUSG00000001441.14_16	chr11	-	1078	10	ISM	ENSMUSG00000001441.14	ENST00000611212.1	1167	11	9324	8	9324	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACGTTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	97149178	97125878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383_97133630_97135253_97135362_97139083_97139150_97149099
ENSMUSG00000001441.14_41	chr11	-	1467	12	FSM	ENSMUSG00000001441.14	ENST00000620148.2	1482	12	9	6	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACGTTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	97171275	97125878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97125942_97126890_97126996_97128919_97129085_97131754_97131870_97132629_97132664_97132776_97132874_97133383_97133630_97135253_97135362_97139027_97139150_97149099_97149178_97158420_97158506_97171026
ENSMUSG00000001445.11_0	chr11	+	1693	5	FSM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGCCTATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	96932393	96940032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96932479_96935353_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001445.11_5	chr11	+	1609	4	ISM	ENSMUSG00000001445.11	ENSMUST00000001485.10	1708	5	2967	7	2932	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGCCTATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	96935352	96940032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_96935524_96937855_96938021_96938238_96938384_96938904
ENSMUSG00000001467.6_0	chr5	-	3914	10	FSM	ENSMUSG00000001467.6	ENSMUST00000001507.5	3931	10	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACAGATTTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4154733	4131148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_4133304_4136459_4136629_4137777_4137874_4141844_4142041_4142387_4142508_4149123_4149299_4150144_4150272_4151177_4151355_4152927_4153027_4154133
ENSMUSG00000001472.18_0	chr8	+	2633	18	FSM	ENSMUSG00000001472.18	ENSMUST00000212571.2	2649	18	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTGAAACAAAAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	124100501	124130539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ENSMUSG00000001472.18_1	chr8	+	2570	18	FSM	ENSMUSG00000001472.18	ENSMUST00000108840.4	2582	18	6	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTGAAACAAAAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	124100567	124130539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129885
ENSMUSG00000001472.18_10	chr8	+	2569	17	FSM	ENSMUSG00000001472.18	ENSMUST00000212470.2	2572	17	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGTTTTTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124100525	124130574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124100804_124108138_124108301_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124129888
ENSMUSG00000001472.18_19	chr8	+	2724	18	FSM	ENSMUSG00000001472.18	ENSMUST00000057934.10	2738	18	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGACGTTAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	124100569	124128624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363_124127437_124127814
ENSMUSG00000001472.18_35	chr8	+	4991	17	FSM	ENSMUSG00000001472.18	ENSMUST00000211932.2	5002	17	1	10	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTGAAACAAAAACATGG	NA	NA	NA	NA	NA	NA	NA	NA	124100595	124130539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124100804_124108138_124108301_124109265_124109341_124110063_124110183_124111087_124111154_124115303_124115387_124116403_124116535_124117517_124117618_124118319_124118414_124119660_124119754_124119870_124119977_124122289_124122450_124123745_124123834_124124721_124124881_124125254_124125346_124126003_124126084_124127363
ENSMUSG00000001473.8_0	chr18	+	1743	4	FSM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	7	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGATCATCGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67523793	67535811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379
ENSMUSG00000001473.8_15	chr18	+	1256	5	FSM	ENSMUSG00000001473.8	ENST00000591208.1	1270	5	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAGATCAACGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	67523812	67535426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67523885_67524394_67524504_67526015_67526127_67534379_67534413_67534495
ENSMUSG00000001473.8_24	chr18	+	1656	3	ISM	ENSMUSG00000001473.8	ENSMUST00000001513.8	1758	4	604	8	581	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTGATCATCGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67524390	67535811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_67524504_67526015_67526127_67534379
ENSMUSG00000001473.8_6	chr18	+	429	4	FSM	ENSMUSG00000001473.8	ENST00000592683.5	437	4	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGTGGATTCGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67523799	67534433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67523885_67524394_67524504_67526015_67526152_67534334
ENSMUSG00000001482.16_0	chr8	+	3115	12	FSM	ENSMUSG00000001482.16	ENSMUST00000065534.10	3127	12	4	8	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	124169728	124190001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124169791_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_2	chr8	+	3202	13	FSM	ENSMUSG00000001482.16	ENSMUST00000001522.10	3214	13	4	8	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAATGTTACTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	124169728	124190001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124169791_124172836_124172924_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_6	chr8	+	3181	12	FSM	ENSMUSG00000001482.16	ENSMUST00000108830.2	3191	12	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTAAAGGAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	124170049	124189994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124170185_124174526_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186255_124186397_124186555_124186666_124188202
ENSMUSG00000001482.16_8	chr8	+	1647	11	FSM	ENSMUSG00000001482.16	ENST00000563795.1	1656	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCTTTAAAACCAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	124174529	124188649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124174652_124176039_124176138_124179483_124179634_124180967_124181110_124182152_124182318_124183144_124183273_124183409_124183524_124185089_124185171_124186306_124186397_124186555_124186666_124188202
ENSMUSG00000001497.19_0	chr12	+	2763	4	FSM	ENSMUSG00000001497.19	ENST00000402703.6	2784	4	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGATTAGCTGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	56742263	56758047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_56742650_56743358_56743986_56746799_56746940_56756437
ENSMUSG00000001506.11_0	chr11	+	5911	51	FSM	ENSMUSG00000001506.11	ENSMUST00000001547.8	5930	51	8	11	8	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACCCAATGCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	94827057	94843857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94827271_94828735_94828931_94829052_94829085_94829203_94829240_94829329_94829432_94830216_94830286_94830522_94830568_94830729_94830784_94830943_94830998_94831370_94831425_94831543_94831598_94831927_94831982_94832062_94832108_94832205_94832260_94832372_94832418_94832553_94832608_94832841_94832941_94833029_94833075_94833167_94833267_94833385_94833440_94833620_94833729_94833831_94833886_94834168_94834268_94834415_94834470_94834558_94834658_94835180_94835235_94835423_94835478_94835577_94835632_94835739_94835794_94836193_94836239_94836325_94836425_94836636_94836745_94837100_94837209_94837399_94837454_94837601_94837656_94837899_94838008_94838095_94838150_94838259_94838314_94838443_94838606_94838708_94838817_94839157_94839266_94839368_94839423_94839531_94839640_94840006_94840061_94840181_94840290_94840545_94840600_94840922_94841031_94841116_94841400_94841534_94841726_94841926_94842170_94842298
ENSMUSG00000001507.17_0	chr11	-	4626	25	FSM	ENSMUSG00000001507.17	ENSMUST00000107739.8	4636	25	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	94960016	94935301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537
ENSMUSG00000001507.17_1	chr11	-	4847	26	FSM	ENSMUSG00000001507.17	ENSMUST00000001548.14	4861	26	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	94967528	94935301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94936590_94937274_94937417_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ENSMUSG00000001507.17_2	chr11	-	4695	26	FSM	ENSMUSG00000001507.17	ENSMUST00000120375.8	4697	26	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	94967627	94935301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94936590_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956_94967485_94967593
ENSMUSG00000001507.17_3	chr11	-	4643	25	ISM	ENSMUSG00000001507.17	ENSMUST00000120375.8	4697	26	161	2	74	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTCTGCTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	94967466	94935301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_94936590_94937746_94937873_94942277_94942377_94943269_94943384_94944050_94944174_94944557_94944741_94944900_94945004_94946521_94946600_94946682_94946763_94947266_94947339_94947529_94947678_94947909_94948008_94948096_94948247_94948792_94948930_94949037_94949106_94950149_94950237_94950381_94950519_94950604_94950694_94952703_94952901_94953378_94953590_94953960_94954048_94956588_94956839_94959050_94959131_94959537_94959666_94966956
ENSMUSG00000001508.16_0	chr11	-	1716	11	FSM	ENSMUSG00000001508.16	ENSMUST00000103162.8	1724	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCGTTTCTAGTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94867145	94853616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94853907_94854027_94854226_94859884_94859912_94860179_94860389_94861496_94861660_94862066_94862266_94862795_94862869_94863039_94863195_94863317_94863438_94864227_94864305_94866940
ENSMUSG00000001510.9_0	chr11	+	2566	3	FSM	ENSMUSG00000001510.9	ENSMUST00000092768.7	2607	3	15	26	15	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGAAGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95010959	95016096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95011473_95012533_95012725_95014234
ENSMUSG00000001517.15_0	chr6	+	3280	7	FSM	ENSMUSG00000001517.15	ENST00000627656.2	3299	7	11	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCCCACTCTACAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	128339935	128351730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_128340136_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128349493_128349567_128349739
ENSMUSG00000001517.15_3	chr6	+	4643	8	FSM	ENSMUSG00000001517.15	ENSMUST00000073316.13	4652	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTCAAGGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	128339935	128353106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_128340081_128342620_128343164_128344249_128344402_128346256_128346449_128347919_128348049_128348930_128348976_128349496_128349567_128349739
ENSMUSG00000001518.13_0	chr6	-	2297	12	FSM	ENSMUSG00000001518.13	ENSMUST00000001559.11	2320	12	13	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATCTGATGCAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128401881	128386416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128387381_128387455_128387630_128388527_128388646_128389661_128389754_128389919_128389974_128390065_128390164_128390487_128390637_128391107_128391248_128392858_128393028_128393219_128393262_128394579_128394676_128401680
ENSMUSG00000001521.13_0	chr6	-	3361	11	FSM	ENSMUSG00000001521.13	ENSMUST00000001562.9	3374	11	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGATGTCGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128332810	128298132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128300176_128300960_128301133_128301942_128302042_128302839_128302955_128303734_128303848_128304502_128304701_128304918_128305041_128310795_128310973_128311400_128311561_128314696_128314749_128332700
ENSMUSG00000001521.13_1	chr6	-	1043	2	FSM	ENSMUSG00000001521.13	ENSMUST00000157005.3	1053	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAACCAGCCATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128332788	128319213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128320169_128332700
ENSMUSG00000001524.15_0	chr17	-	1657	14	FSM	ENSMUSG00000001524.15	ENSMUST00000001565.15	1679	14	9	13	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAAAATCTACGCGG	NA	NA	NA	NA	NA	NA	NA	NA	35984622	35978634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984447
ENSMUSG00000001524.15_4	chr17	-	1549	14	FSM	ENSMUSG00000001524.15	ENSMUST00000160734.8	1569	14	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATTATGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35984501	35978643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35978895_35979319_35979399_35979501_35979550_35980200_35980332_35980520_35980654_35980839_35980924_35981081_35981151_35981256_35981369_35981548_35981638_35981757_35981855_35982117_35982250_35982884_35982990_35983577_35983721_35984425
ENSMUSG00000001525.11_0	chr17	-	2629	4	FSM	ENSMUSG00000001525.11	ENSMUST00000001566.10	2649	4	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGGAAAAAGGCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36149189	36144823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36146932_36147054_36147166_36147519_36147629_36148888
ENSMUSG00000001542.8_0	chr13	+	4368	12	FSM	ENSMUSG00000001542.8	ENSMUST00000001583.8	4382	12	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCCAAAAATAAGTGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	75854877	75920471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_75855917_75873071_75873120_75894410_75894533_75898043_75898208_75904393_75904654_75909996_75910122_75910263_75910349_75911666_75912235_75914272_75914340_75917657_75917830_75918664_75918710_75918798
ENSMUSG00000001552.15_0	chr11	-	3184	14	FSM	ENSMUSG00000001552.15	ENSMUST00000001592.15	3205	14	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCCAATGGAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100288564	100261454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100262276_100263121_100263288_100263481_100263522_100264903_100265026_100265151_100265303_100267548_100267825_100268914_100269254_100270347_100270452_100271369_100271515_100272501_100272704_100273832_100274072_100274220_100274481_100276998_100277215_100288461
ENSMUSG00000001555.11_0	chr11	+	2568	10	FSM	ENSMUSG00000001555.11	ENSMUST00000001595.10	2584	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAGACCTCCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	100306530	100315642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100306852_100311225_100311372_100311716_100311907_100312019_100312166_100312469_100312660_100312769_100312916_100313451_100313645_100313910_100314054_100314261_100314426_100314713
ENSMUSG00000001569.11_0	chr5	+	9203	11	FSM	ENSMUSG00000001569.11	ENSMUST00000001611.11	9219	11	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTAGAAAAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	29639667	29662831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29640642_29640927_29641056_29642594_29642791_29644823_29645148_29646328_29646440_29647491_29647660_29648347_29648470_29651236_29651370_29651811_29651944_29654579_29654690_29656026
ENSMUSG00000001576.16_0	chr17	+	2742	10	FSM	ENSMUSG00000001576.16	ENSMUST00000167662.8	2754	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATATTGCTGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	26780472	26875903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26780607_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001576.16_10	chr17	+	560	5	ISM	ENSMUSG00000001576.16	ENST00000523291.5	586	6	46983	3	7268	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCGTCGCCTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	26827566	26850873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26850668
ENSMUSG00000001576.16_7	chr17	+	1121	10	FSM	ENSMUSG00000001576.16	ENSMUST00000235915.2	1132	10	10	1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACGTGTCTCTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	26813859	26874325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26813951_26827566_26827629_26833329_26833403_26843563_26843659_26848528_26848654_26853390_26853496_26854959_26855021_26857716_26857818_26860555_26860679_26874040
ENSMUSG00000001604.15_0	chr4	+	1230	11	NNC	ENSMUSG00000001604.15	novel	1251	11	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGACAGAAAATGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	135975276	136002201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_135975429_135981056_135981120_135981775_135981882_135982460_135982600_135985234_135985298_135991757_135991922_135992182_135992237_135995315_135995475_135998543_135998691_136000954_136001027_136002090
ENSMUSG00000001627.13_0	chr12	-	3364	12	FSM	ENSMUSG00000001627.13	ENSMUST00000001672.12	3378	12	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAATTTTGGGAGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40273178	40251569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867
ENSMUSG00000001627.13_16	chr12	-	1781	13	FSM	ENSMUSG00000001627.13	ENST00000005558.8	1798	13	13	4	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTCTGAATTTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40298050	40253362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867_40273137_40297798
ENSMUSG00000001627.13_7	chr12	-	1748	12	FSM	ENSMUSG00000001627.13	ENST00000621379.4	1757	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTGTGTAGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40298054	40253130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40297798
ENSMUSG00000001627.13_8	chr12	-	2170	13	FSM	ENSMUSG00000001627.13	ENST00000675578.1	2181	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTGTGTAGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	40298277	40253130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40253451_40253917_40254014_40254295_40254425_40256987_40257123_40262308_40262418_40262937_40263117_40263207_40263259_40263976_40264135_40266188_40266314_40267156_40267242_40267376_40267482_40272867_40273067_40297798
ENSMUSG00000001630.14_0	chr6	+	4542	14	FSM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTCTGTTGGTGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	146626492	146680302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146626546_146659958_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUSG00000001630.14_12	chr6	+	4484	13	ISM	ENSMUSG00000001630.14	ENSMUST00000001675.14	4550	14	33469	10	33428	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCTCTGTTGGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	146659961	146680300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677091
ENSMUSG00000001630.14_18	chr6	+	2252	13	ISM	ENSMUSG00000001630.14	ENSMUST00000111644.2	2274	14	33426	9	33426	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCAAACTTCTGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	146659959	146678045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_146660104_146661618_146661671_146667692_146667816_146668235_146668320_146668916_146669041_146669830_146669986_146670331_146670435_146670592_146670655_146673079_146673198_146673595_146673720_146674815_146674912_146676897_146676990_146677070
ENSMUSG00000001632.17_28	chr6	+	4042	12	FSM	ENSMUSG00000001632.17	ENST00000682980.1	4061	12	9	10	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATAAAGTCTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	113286772	113301796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113296001_113296323_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001632.17_5	chr6	+	5137	14	FSM	ENSMUSG00000001632.17	ENST00000684199.1	5153	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGACCCCTCCCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113284669	113301559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113285705_113286763_113287370_113291551_113292512_113293488_113293652_113294020_113294153_113294508_113294656_113295372_113295683_113295998_113296323_113296628_113296914_113297394_113297543_113298689_113298827_113298928_113299048_113299373_113299529_113300943
ENSMUSG00000001642.19_0	chr6	-	1375	10	FSM	ENSMUSG00000001642.19	ENSMUST00000102980.11	1387	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGGTGGTGGTCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34294403	34280870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34281275_34283474_34283558_34285913_34285998_34286510_34286593_34286895_34287003_34287447_34287571_34287859_34287938_34288856_34288974_34289574_34289743_34294274
ENSMUSG00000001655.7_0	chr15	+	2447	2	FSM	ENSMUSG00000001655.7	ENSMUST00000001700.7	2461	2	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTGCTTGGGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	102829550	102837248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102830353_102835603
ENSMUSG00000001656.4_0	chr15	+	2014	2	FSM	ENSMUSG00000001656.4	ENST00000243082.4	2031	2	15	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATGATTTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102862870	102866141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102863647_102864903
ENSMUSG00000001656.4_1	chr15	+	2015	2	FSM	ENSMUSG00000001656.4	ENSMUST00000001701.4	2021	2	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATGATTTTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102862865	102866141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102863643_102864903
ENSMUSG00000001657.8_0	chr15	+	1859	2	FSM	ENSMUSG00000001657.8	ENSMUST00000001703.8	1868	2	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGGAGAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	102899041	102902247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102899648_102900994
ENSMUSG00000001661.6_0	chr15	+	1364	2	FSM	ENSMUSG00000022485.4	ENST00000512206.1	1388	2	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGGACTAAAGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	102906892	102924712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102907204_102923659
ENSMUSG00000001663.11_0	chr10	-	1015	5	FSM	ENSMUSG00000001663.11	ENSMUST00000001713.10	1037	5	20	2	20	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTCTCCGTGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75634398	75619648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75620068_75622628_75622806_75629910_75630062_75632876_75632965_75634218
ENSMUSG00000001665.12_0	chr10	-	1857	5	FSM	ENSMUSG00000001665.12	ENSMUST00000001715.10	1880	5	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAGAGTAATGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75617238	75609961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75610845_75611704_75611882_75612577_75612729_75613934_75614023_75616680
ENSMUSG00000001666.9_0	chr10	-	626	3	FSM	ENSMUSG00000001666.9	ENSMUST00000001716.8	649	3	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTCAAACATGACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75609232	75607073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75607341_75608571_75608748_75609049
ENSMUSG00000001674.12_0	chr1	-	2244	13	FSM	ENSMUSG00000001674.12	ENSMUST00000001724.12	2258	13	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTTTTATACCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	121495706	121481565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_121481868_121482944_121483123_121483419_121483477_121485133_121485248_121486139_121486293_121486894_121487057_121487860_121488001_121489009_121489325_121489418_121489520_121489787_121489924_121492221_121492333_121493609_121493898_121495519
ENSMUSG00000001687.16_0	chr5	-	2501	5	FSM	ENSMUSG00000001687.16	ENSMUST00000079324.14	2537	5	14	22	14	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACAAAACATTG	NA	NA	NA	NA	NA	NA	NA	NA	148489458	148441466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762
ENSMUSG00000001687.16_1	chr5	-	2029	6	FSM	ENSMUSG00000001687.16	ENSMUST00000201595.4	2064	6	22	13	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGATTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	148489577	148441951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148442998_148443255_148443334_148446078_148446166_148448703_148448813_148488762_148488861_148488966
ENSMUSG00000001700.11_0	chr18	+	2614	15	FSM	ENSMUSG00000001700.11	ENSMUST00000237355.2	2629	15	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTACTTGCAGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	56533417	56636630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_56533648_56565190_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
ENSMUSG00000001700.11_4	chr18	+	2594	14	FSM	ENSMUSG00000001700.11	ENSMUST00000070166.6	2605	14	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAATGCTGTTTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	56565211	56636861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_56565430_56602604_56602725_56607090_56607203_56609674_56609742_56611920_56612025_56615692_56615789_56618283_56618356_56618447_56618529_56621822_56621935_56622686_56622810_56623742_56623831_56624966_56625072_56630391_56630486_56635659
ENSMUSG00000001707.9_0	chr13	-	2542	4	FSM	ENSMUSG00000001707.9	ENSMUST00000001757.9	2553	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTGGTGACAACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	38843023	38828182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38830287_38838971_38839068_38840015_38840217_38842882
ENSMUSG00000001729.15_0	chr12	-	2673	14	FSM	ENSMUSG00000001729.15	ENSMUST00000001780.10	2690	14	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGGTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112640700	112620261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112621212_112621560_112621664_112622935_112623024_112623210_112623426_112623501_112623631_112623701_112623828_112624100_112624170_112624831_112624898_112624979_112625112_112625562_112625711_112625983_112626096_112628613_112628743_112637949_112638089_112640433
ENSMUSG00000001739.15_1	chr5	+	956	5	FSM	ENSMUSG00000001739.15	ENST00000401528.5	969	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTGAGGGGATGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	136996473	137003575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136996591_136996697_136997178_137001173_137001339_137003294_137003377_137003463
ENSMUSG00000001739.15_2	chr5	+	1876	5	FSM	ENSMUSG00000001739.15	ENSMUST00000001790.6	1850	5	-17	-9	-17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATGTGTGTGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	136996705	137004707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136997178_137001173_137001339_137003294_137003377_137003463_137003581_137003667
ENSMUSG00000001750.17_0	chr19	-	3022	20	FSM	ENSMUSG00000001750.17	ENSMUST00000126070.9	3041	20	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTTTGTCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3956977	3946054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3956523
ENSMUSG00000001750.17_1	chr19	-	2673	20	FSM	ENSMUSG00000001750.17	ENSMUST00000001801.11	2688	20	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTTTGTCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3957123	3946054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3957018
ENSMUSG00000001750.17_2	chr19	-	2711	20	FSM	ENSMUSG00000001750.17	ENSMUST00000145791.8	2729	20	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAACTTTGTCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3955217	3946054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3946193_3946269_3946448_3946603_3946722_3946794_3946903_3947037_3947170_3947467_3947682_3947757_3947877_3948547_3948639_3948717_3948876_3948979_3949120_3951890_3952036_3952343_3952557_3952630_3952725_3952881_3952965_3953045_3953173_3953339_3953429_3953508_3953730_3954216_3954296_3954584_3954706_3955074
ENSMUSG00000001751.10_0	chr11	+	2538	6	FSM	ENSMUSG00000001751.10	ENSMUST00000001802.10	2560	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACATTAAAGTATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	100960848	100968487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100961328_100961905_100962054_100962721_100962869_100963042_100963129_100964672_100964930_100967066
ENSMUSG00000001755.13_0	chr11	+	2121	10	FSM	ENSMUSG00000001755.13	ENSMUST00000001806.10	2138	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCTTGTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100973401	100977439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100973517_100973824_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001755.13_7	chr11	+	2373	9	FSM	ENSMUSG00000001755.13	ENSMUST00000107308.4	2386	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGCTGCTTGTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100973457	100977439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100974533_100975141_100975357_100975580_100975713_100975833_100976024_100976107_100976173_100976361_100976447_100976615_100976714_100976823_100976971_100977073
ENSMUSG00000001761.8_0	chr6	+	3751	12	FSM	ENSMUSG00000001761.8	ENSMUST00000001812.5	3779	12	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCTCATGCGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29735711	29761355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29736353_29753468_29753675_29754320_29754531_29754690_29754864_29755172_29755393_29755481_29755606_29756779_29756873_29757255_29757365_29758334_29758521_29758864_29759014_29759482_29759618_29759850
ENSMUSG00000001767.6_0	chr2	-	3410	14	FSM	ENSMUSG00000001767.6	ENSMUST00000001818.5	3428	14	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTCCAAAAAGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	145776927	145759409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_145760521_145761659_145761909_145762516_145762619_145763691_145763932_145765763_145765845_145766634_145766695_145767427_145767620_145768695_145768867_145770040_145770220_145772453_145772621_145773189_145773349_145774165_145774258_145774732_145774886_145776473
ENSMUSG00000001768.17_0	chr2	+	4629	12	FSM	ENSMUSG00000001768.17	ENSMUST00000110005.8	4641	12	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	145627904	145729529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_145628100_145628241_145628335_145664184_145664286_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_1	chr2	+	4650	13	FSM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	145628035	145729529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_145628100_145628241_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001768.17_3	chr2	+	4581	12	ISM	ENSMUSG00000001768.17	ENSMUST00000094480.11	4657	13	211	7	211	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTCAGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	145628246	145729529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_145628335_145664184_145664286_145664529_145664682_145686630_145686824_145690684_145690797_145693098_145693172_145700360_145700453_145701933_145703095_145718310_145718617_145720763_145720896_145725241_145725406_145727522
ENSMUSG00000001773.15_0	chr7	-	2027	17	FSM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAACACATTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	86422503	86368873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_86369057_86374616_86374699_86375090_86375356_86378281_86378373_86380933_86381026_86383299_86383368_86385656_86385721_86391378_86391462_86393578_86393699_86395319_86395406_86395992_86396092_86406145_86406240_86410908_86411096_86412124_86412251_86417343_86417446_86420910_86421098_86422405
ENSMUSG00000001773.15_1	chr7	-	1929	16	ISM	ENSMUSG00000001773.15	ENST00000356696.7	2046	17	1418	7	1418	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAACACATTCTACAG	NA	NA	NA	NA	NA	NA	NA	NA	86421097	86368873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_86369057_86374616_86374699_86375090_86375356_86378281_86378373_86380933_86381026_86383299_86383368_86385656_86385721_86391378_86391462_86393578_86393699_86395319_86395406_86395992_86396092_86406145_86406240_86410908_86411096_86412124_86412251_86417343_86417446_86420910
ENSMUSG00000001774.9_0	chr9	+	5773	11	FSM	ENSMUSG00000001774.9	ENSMUST00000001825.9	5789	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAACCTCTTAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	18203430	18228732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_18203757_18206595_18206646_18212301_18212359_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001774.9_11	chr9	+	1614	9	FSM	ENSMUSG00000001774.9	ENST00000457199.6	1618	9	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGGGTGATATCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18206594	18224955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_18206646_18213321_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001774.9_13	chr9	+	1554	8	ISM	ENSMUSG00000001774.9	ENST00000457199.6	1618	9	6733	7	6733	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTATGGGTGATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	18213327	18224952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_18213480_18215578_18215683_18216588_18216648_18220045_18220117_18221128_18221235_18223207_18223328_18223725_18223789_18224073
ENSMUSG00000001783.4_0	chr10	-	1991	12	FSM	ENSMUSG00000001783.4	ENSMUST00000001834.4	2009	12	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTCCTTTCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85793675	85774506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_85774984_85777762_85777883_85778351_85778463_85779072_85779262_85779678_85779855_85782054_85782215_85783040_85783198_85785329_85785487_85787218_85787319_85789300_85789369_85791582_85791662_85793478
ENSMUSG00000001785.14_0	chr10	+	2555	15	FSM	ENSMUSG00000001785.14	ENSMUST00000001836.11	2572	15	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAATTCACCTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	85707707	85724956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85707879_85710141_85710201_85710312_85710498_85712161_85712248_85712349_85712447_85714342_85714454_85715125_85715257_85715693_85715756_85717866_85717964_85718734_85718797_85720326_85720439_85721473_85721565_85721660_85721783_85723086_85723193_85723893
ENSMUSG00000001786.15_0	chr10	+	5376	9	FSM	ENSMUSG00000001786.15	ENSMUST00000130320.8	5388	9	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTATTTACAATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	85857839	85887729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85858009_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_1	chr10	+	1636	9	FSM	ENSMUSG00000001786.15	ENSMUST00000120344.8	1655	9	10	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTATGGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	85858062	85884178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85858195_85860431_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001786.15_2	chr10	+	1790	9	FSM	ENSMUSG00000001786.15	ENSMUST00000117597.2	1799	9	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTGTATGGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	85858060	85884178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85858195_85860279_85860575_85864872_85865101_85866791_85866934_85869097_85869185_85878785_85878882_85880286_85880464_85882636_85882675_85883585
ENSMUSG00000001794.14_0	chr7	-	1593	12	FSM	ENSMUSG00000001794.14	ENSMUST00000001845.13	1600	12	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29898236	29886373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430_29894590_29898182
ENSMUSG00000001794.14_1	chr7	-	1423	11	FSM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29894473	29886373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302_29893527_29894430
ENSMUSG00000001794.14_2	chr7	-	1372	10	ISM	ENSMUSG00000001794.14	ENSMUST00000126116.3	1429	11	955	6	-6	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTATAGAGTAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29893518	29886373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29893302
ENSMUSG00000001794.14_5	chr7	-	1188	10	FSM	ENSMUSG00000001794.14	ENSMUST00000108196.8	1192	10	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGACTCTGAGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29892527	29886414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29891927_29892018_29892291_29892326_29892454
ENSMUSG00000001794.14_8	chr7	-	751	9	FSM	ENSMUSG00000001794.14	ENST00000590874.5	765	9	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGAACCCTGATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29893502	29886888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29886959_29887095_29887155_29889476_29889594_29889903_29889983_29890083_29890153_29891586_29891652_29891744_29891803_29892291_29892326_29893302
ENSMUSG00000001815.16_0	chr2	-	3319	4	FSM	ENSMUSG00000001815.16	ENST00000308618.4	3342	4	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAATCAGAGAGCAATT	NA	NA	NA	NA	NA	NA	NA	NA	74489884	74483344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_74484912_74485756_74486680_74488110_74488392_74489336
ENSMUSG00000001829.18_0	chr7	+	4610	16	FSM	ENSMUSG00000001829.18	ENSMUST00000001884.14	4627	16	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTATGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	101312850	101439369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_3	chr7	+	2249	16	FSM	ENSMUSG00000001829.18	ENST00000543042.6	2264	16	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAACCAATCCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101312897	101437010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101313421_101316454_101316507_101336494_101336582_101355689_101355794_101360617_101360708_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001829.18_5	chr7	+	2044	15	FSM	ENSMUSG00000001829.18	ENST00000340729.9	2059	15	10	5	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAACCAATCCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101312970	101437010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101313421_101316454_101316507_101355689_101355794_101371911_101372041_101400440_101400539_101412787_101412903_101422286_101422365_101423398_101423455_101427778_101427824_101428408_101428571_101434534_101434692_101435306_101435381_101435493_101435614_101435852_101435958_101436711
ENSMUSG00000001833.18_0	chr9	+	2494	13	NIC	ENSMUSG00000001833.18	novel	2533	14	NA	NA	11	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAACAGAGTGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25163757	25219856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_13	chr9	+	1532	12	FSM	ENSMUSG00000001833.18	ENST00000435235.6	1550	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATTAACAGCTCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	25163798	25219038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_25163996_25188839_25188947_25197963_25198065_25199479_25199615_25204980_25205099_25207690_25207784_25209107_25209205_25210787_25210840_25212707_25212834_25215012_25215149_25217421_25217562_25218808
ENSMUSG00000001833.18_21	chr9	+	538	5	FSM	ENSMUSG00000001833.18	ENST00000672279.1	543	5	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGCTACATCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25163915	25199626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_25163996_25176689_25176793_25188839_25188947_25197963_25198065_25199479
ENSMUSG00000001833.18_27	chr9	+	272	2	FSM	ENSMUSG00000001833.18	ENST00000437076.1	290	2	12	6	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAGTACGTATATAACTT	NA	NA	NA	NA	NA	NA	NA	NA	25188839	25212828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_25188955_25212671
ENSMUSG00000001833.18_31	chr9	+	213	2	FSM	ENSMUSG00000001833.18	ENST00000613964.2	225	2	8	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTACCAAGTACGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	25188849	25212823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_25188947_25212707
ENSMUSG00000001844.11_0	chr5	-	1347	8	FSM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	8	9	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGATATTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	143315003	143302252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145_143314326_143314920
ENSMUSG00000001844.11_1	chr5	-	1265	7	ISM	ENSMUSG00000001844.11	ENSMUST00000001900.9	1364	8	685	9	685	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGATATTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	143314326	143302252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_143302588_143305985_143306231_143307523_143307650_143309886_143310066_143310639_143310714_143311853_143311979_143314145
ENSMUSG00000001847.15_2	chr5	-	4133	6	FSM	ENSMUSG00000001847.15	ENSMUST00000080537.14	4159	6	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	8367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAAACAAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	143513781	143489404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143500423_143500542_143502912_143502985_143513517
ENSMUSG00000001847.15_7	chr5	-	2317	7	FSM	ENSMUSG00000001847.15	ENSMUST00000100489.4	2325	7	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATACAACTGGTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	143513746	143491242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143492861_143493081_143493242_143493850_143493914_143495351_143495409_143500423_143500542_143502912_143502985_143513517
ENSMUSG00000001855.16_0	chr2	+	6590	36	FSM	ENSMUSG00000001855.16	ENSMUST00000065398.13	6605	36	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACATCTGGGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	31864456	31942377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31864621_31866511_31866708_31867775_31867928_31869701_31869901_31870521_31870593_31872622_31872687_31873134_31873239_31878165_31878273_31879084_31879152_31880246_31880374_31881275_31881438_31884534_31884989_31886387_31886564_31887964_31888063_31892603_31892691_31892892_31893043_31894324_31894484_31896700_31896805_31900194_31900378_31901023_31901098_31901196_31901281_31907037_31907350_31908206_31908369_31910269_31910370_31915254_31915331_31916859_31916939_31920718_31920810_31921261_31921321_31923214_31924982_31928113_31928185_31929334_31929489_31932428_31932582_31937414_31937587_31941020_31941161_31941785_31941811_31942130
ENSMUSG00000001855.16_11	chr2	+	2310	5	FSM	ENSMUSG00000001855.16	ENST00000483497.6	2324	5	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCAGGTGGGACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	31923226	31937588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31924982_31928113_31928185_31929331_31929489_31932428_31932582_31937414
ENSMUSG00000001864.14_0	chr2	+	3098	6	FSM	ENSMUSG00000001864.14	ENSMUST00000001920.13	3117	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATTTATCAGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31840160	31863445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859805_31860914
ENSMUSG00000001864.14_3	chr2	+	381	6	FSM	ENSMUSG00000001864.14	ENST00000372300.5	388	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCACCCGGACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	31840360	31861001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31840394_31840540_31840603_31852226_31852294_31855082_31855125_31859641_31859732_31860914
ENSMUSG00000001864.14_4	chr2	+	338	5	ISM	ENSMUSG00000001864.14	ENST00000372300.5	388	6	190	7	190	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACCCACCCGGACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	31840550	31861001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_31840603_31852226_31852294_31855082_31855125_31859641_31859732_31860914
ENSMUSG00000001870.17_1	chr17	+	6666	34	FSM	ENSMUSG00000001870.17	ENSMUST00000001927.12	6671	34	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACAACCTGTCTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	75312567	75698762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75313357_75314325_75314397_75372905_75373198_75458259_75458430_75486031_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUSG00000001870.17_21	chr17	+	4855	30	FSM	ENSMUSG00000001870.17	ENSMUST00000112514.2	4870	30	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAATTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75485918	75698319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583549_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUSG00000001870.17_9	chr17	+	5118	30	FSM	ENSMUSG00000001870.17	ENSMUST00000112516.8	5140	30	10	12	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAATTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75485814	75698319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75486200_75532150_75532376_75533961_75534237_75555888_75555992_75559338_75559411_75573482_75573606_75580861_75581030_75583390_75583619_75585946_75585970_75589322_75589423_75589914_75590014_75597009_75597136_75598285_75598412_75599750_75599874_75603218_75603339_75617150_75617274_75619970_75620094_75621997_75622121_75627965_75628089_75634191_75634318_75655738_75655865_75659681_75659826_75666284_75666465_75667706_75667794_75669504_75669634_75670332_75670474_75671333_75671505_75692067_75692191_75696424_75696575_75697366
ENSMUSG00000001891.17_0	chr11	-	2658	10	FSM	ENSMUSG00000001891.17	ENSMUST00000102875.11	2683	10	12	13	12	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATTGAAAAAAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	21320465	21271150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21320186
ENSMUSG00000001891.17_11	chr11	-	2032	10	FSM	ENSMUSG00000001891.17	ENSMUST00000060895.6	2044	10	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTACTTTTGCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	21321196	21271679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21272130_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278_21304407_21321014
ENSMUSG00000001891.17_18	chr11	-	1699	9	FSM	ENSMUSG00000001891.17	ENST00000613823.2	1715	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTACTTAACCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21304399	21271788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21272095_21273198_21273304_21278870_21279114_21279724_21279923_21280833_21281132_21282415_21282550_21283624_21283811_21303348_21303457_21304278
ENSMUSG00000001909.17_0	chr8	+	2551	17	FSM	ENSMUSG00000001909.17	ENSMUST00000001974.11	2567	17	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGGAAGCCATCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	85415503	85426430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85416006_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_2	chr8	+	2126	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109767.9	2138	17	5	7	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	85415880	85426409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85415979_85416260_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_3	chr8	+	2030	17	FSM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	8	6	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	85415900	85426409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85415979_85416336_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001909.17_6	chr8	+	1952	16	ISM	ENSMUSG00000001909.17	ENSMUST00000109768.9	2044	17	444	6	244	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTGGTTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	85416336	85426409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_85416538_85417145_85417202_85417439_85417577_85417880_85418069_85421850_85421967_85422056_85422170_85423455_85423605_85423743_85423831_85423897_85423968_85424053_85424189_85424274_85424361_85424813_85424923_85425021_85425099_85425767_85425888_85425969_85426100_85426231
ENSMUSG00000001910.6_0	chr8	-	4332	6	FSM	ENSMUSG00000001910.6	ENSMUST00000001975.6	4344	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGCCCTGCTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85414523	85397111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85399934_85401393_85401492_85401627_85401734_85402713_85402888_85402969_85403882_85414303
ENSMUSG00000001911.17_0	chr8	-	5407	10	ISM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	1089	18	1089	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACAAATGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	85498936	85431358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412
ENSMUSG00000001911.17_1	chr8	-	5458	11	FSM	ENSMUSG00000001911.17	ENSMUST00000109764.8	5476	11	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAACAAATGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	85500025	85431358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85435307_85440394_85440487_85442769_85442918_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_15	chr8	-	1367	9	FSM	ENSMUSG00000001911.17	ENSMUST00000076715.13	1403	9	10	26	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85526759	85435268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
ENSMUSG00000001911.17_16	chr8	-	1680	10	FSM	ENSMUSG00000001911.17	ENSMUST00000099070.10	1728	10	24	24	24	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85526949	85435268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85526626
ENSMUSG00000001911.17_18	chr8	-	2235	9	FSM	ENSMUSG00000001911.17	ENSMUST00000109762.8	2261	9	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85500986	85435268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85453097_85453232_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_8	chr8	-	1489	10	FSM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCGAAAAGCAAAACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	85500025	85435179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412_85498945_85499982
ENSMUSG00000001911.17_9	chr8	-	1439	9	ISM	ENSMUSG00000001911.17	ENST00000587760.5	1496	10	1088	7	1088	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCGAAAAGCAAAACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	85498937	85435179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_85435307_85440394_85440487_85448271_85448448_85450356_85450480_85453097_85453235_85453752_85453874_85454233_85454309_85454533_85454597_85498412
ENSMUSG00000001918.18_0	chr7	+	2744	9	FSM	ENSMUSG00000001918.18	ENSMUST00000108496.9	2764	9	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATACCAGGTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	16515275	16532190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16516401_16519600_16519644_16520273_16520319_16520795_16520838_16523701_16523863_16527571_16527806_16529682_16529878_16529948_16530084_16531426
ENSMUSG00000001924.16_0	chrX	+	4035	26	FSM	ENSMUSG00000001924.16	ENSMUST00000089217.11	4044	26	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	20524573	20549418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20524766_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001924.16_8	chrX	+	4060	26	FSM	ENSMUSG00000001924.16	ENSMUST00000001989.9	4071	26	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTAAGTTCGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	20529147	20549418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20529365_20534687_20534805_20534930_20534990_20535087_20535257_20535366_20535502_20536442_20536550_20536782_20536874_20536979_20537113_20537594_20537693_20537928_20538076_20538209_20538387_20538482_20538588_20538673_20538755_20539054_20539211_20541824_20541991_20542117_20542315_20544437_20544503_20544827_20545024_20545629_20545705_20545831_20546022_20547021_20547111_20547346_20547440_20547561_20547754_20548141_20548244_20548347_20548449_20548616
ENSMUSG00000001942.9_0	chr9	+	2295	11	FSM	ENSMUSG00000001942.9	ENSMUST00000213126.2	2306	11	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTACTACCCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	37466996	37558275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37467160_37469400_37469519_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ENSMUSG00000001942.9_1	chr9	+	4942	10	FSM	ENSMUSG00000001942.9	ENSMUST00000215474.2	4947	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37524965	37560946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37525223_37528095_37528258_37534194_37534371_37538995_37539135_37542644_37542901_37544253_37544364_37544916_37545051_37553935_37554094_37556047_37556244_37557592
ENSMUSG00000001948.11_0	chr9	-	678	5	FSM	ENSMUSG00000001948.11	ENSMUST00000002013.11	696	5	7	11	7	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCATCAGTGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	37525011	37514596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37514783_37517088_37517167_37518912_37518984_37523131_37523315_37524851
ENSMUSG00000001962.9_0	chrX	+	1375	13	FSM	ENSMUSG00000001962.9	ENSMUST00000114160.2	1383	13	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGAACCTGCGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73356645	73363754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73356932_73358282_73358368_73358469_73358570_73359032_73359179_73361035_73361113_73361242_73361310_73361747_73361810_73361973_73362051_73362420_73362476_73362655_73362705_73362796_73362868_73362997_73363109_73363565
ENSMUSG00000001964.15_0	chrX	+	1571	6	FSM	ENSMUSG00000001964.15	ENSMUST00000002029.13	1595	6	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAGATAAGTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	73298304	73301481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73300612
ENSMUSG00000001964.15_2	chrX	+	1323	6	FSM	ENSMUSG00000001964.15	ENSMUST00000088313.5	1338	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAGCCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73298441	73305145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73298640_73298813_73298922_73299058_73299137_73299348_73299483_73300483_73300531_73304387
ENSMUSG00000001983.8_0	chr11	+	1376	5	FSM	ENSMUSG00000001983.8	ENSMUST00000002048.8	1383	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTCTTGAGGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	105956892	105964437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105957345_105960331_105960439_105962692_105962821_105963356_105963535_105963926
ENSMUSG00000001986.17_0	chrX	+	498	4	FSM	ENSMUSG00000001986.17	ENST00000616590.4	514	4	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAACAAGATCAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	40490071	40512868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_40490135_40490405_40490533_40491677_40491946_40512828
ENSMUSG00000001986.17_3	chrX	+	592	3	FSM	ENSMUSG00000001986.17	ENST00000611689.4	640	3	36	12	36	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAACAAGATCAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	40490248	40512868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_40490533_40491677_40491946_40512828
ENSMUSG00000001988.10_0	chr7	-	1203	7	FSM	ENSMUSG00000001988.10	ENST00000439365.6	1223	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGACAGTGTAACACC	NA	NA	NA	NA	NA	NA	NA	NA	16197333	16189764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16190230_16193110_16193206_16194730_16194832_16195254_16195362_16195705_16195864_16196074_16196191_16197172
ENSMUSG00000001995.10_0	chr8	-	6240	21	FSM	ENSMUSG00000001995.10	ENST00000366630.5	6263	21	13	10	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	126219333	126144814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126149931_126149986_126159916_126160049_126165998_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001995.10_1	chr8	-	6190	20	FSM	ENSMUSG00000001995.10	ENST00000674749.1	6209	20	9	10	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGAAGCAGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	126219337	126144814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_126146031_126148619_126148702_126149317_126149442_126159916_126160049_126165998_126166223_126169321_126169476_126171224_126171450_126174245_126174632_126176619_126176724_126177071_126177173_126178657_126178742_126180039_126180298_126190890_126191166_126194913_126195491_126196486_126196645_126200236_126200341_126201562_126201738_126206892_126207082_126208786_126208921_126217849
ENSMUSG00000001998.16_1	chr2	+	4573	21	FSM	ENSMUSG00000001998.16	ENSMUST00000002063.15	4600	21	9	18	9	-18	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	126850658	126909811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126850821_126853710_126853783_126856089_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ENSMUSG00000001998.16_19	chr2	+	3532	19	ISM	ENSMUSG00000001998.16	ENST00000560508.1	3608	20	2357	0	2357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTGCAGGGGACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	126856067	126908982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ENSMUSG00000001998.16_3	chr2	+	3603	20	FSM	ENSMUSG00000001998.16	ENST00000560508.1	3608	20	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTGCAGGGGACACAGA	NA	NA	NA	NA	NA	NA	NA	NA	126853715	126908982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126853787_126856067_126856214_126861205_126861280_126870091_126870214_126875449_126875610_126876963_126877131_126879705_126879780_126885340_126885464_126885566_126885677_126888067_126888208_126888765_126888879_126888962_126889082_126891179_126891483_126894099_126894215_126898100_126898225_126902181_126902441_126903445_126903959_126905189_126905381_126906791_126906950_126908461
ENSMUSG00000001999.16_0	chr2	+	1149	8	FSM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAACAGAACGAGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	126912587	126938994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126912651_126922449_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000001999.16_8	chr2	+	1083	7	ISM	ENSMUSG00000001999.16	ENSMUST00000002064.15	1160	8	9866	10	9840	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAACAGAACGAGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	126922452	126938994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_126922579_126924851_126924971_126927882_126928003_126928764_126928863_126933958_126934067_126937005_126937178_126938654
ENSMUSG00000002007.6_1	chrX	+	1868	14	FSM	ENSMUSG00000002007.6	ENST00000370101.8	1884	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAATGCCAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72818195	72822523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819970_72820066_72820093_72820572_72820706_72820793_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUSG00000002007.6_6	chrX	+	1766	15	FSM	ENSMUSG00000002007.6	ENST00000393786.7	1782	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAATGCCAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72818195	72822523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72818321_72818498_72818608_72818709_72818798_72819083_72819172_72819625_72819733_72819803_72819970_72820066_72820093_72820575_72820706_72820793_72820842_72820940_72821034_72821114_72821216_72821529_72821638_72821710_72821781_72821859_72821953_72822109
ENSMUSG00000002010.18_0	chrX	-	1316	13	FSM	ENSMUSG00000002010.18	ENSMUST00000052761.9	1331	13	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72830492	72822572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72825903_72825916_72826280_72826323_72830380
ENSMUSG00000002010.18_1	chrX	-	1300	12	NIC	ENSMUSG00000002010.18	novel	1331	13	NA	NA	-14	-4	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGGCCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72830488	72822572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_72822778_72823071_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825710_72826280_72826323_72830380
ENSMUSG00000002010.18_11	chrX	-	1144	9	FSM	ENSMUSG00000002010.18	ENST00000370093.5	1161	9	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTAAGGCTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830468	72823076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825739_72830380
ENSMUSG00000002010.18_12	chrX	-	1223	10	FSM	ENSMUSG00000002010.18	ENST00000370092.7	1243	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTAAGGCTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72830634	72823076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72823133_72823219_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611_72825739_72830380
ENSMUSG00000002010.18_15	chrX	-	1058	8	ISM	ENSMUSG00000002010.18	ENST00000370093.5	1161	9	4734	11	4734	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTAAGGCTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72825740	72823076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_72823315_72823582_72823730_72823818_72823922_72824179_72824314_72824503_72824637_72824757_72824819_72825282_72825396_72825611
ENSMUSG00000002012.14_9	chrX	-	1548	12	FSM	ENSMUSG00000002012.14	ENST00000370150.5	1556	12	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCCTTTAGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72703501	72699650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72699989_72700275_72700421_72700517_72700606_72700676_72700756_72700836_72700950_72701043_72701120_72701325_72701450_72701624_72701764_72701859_72701935_72702293_72702426_72702785_72702856_72703332
ENSMUSG00000002014.13_0	chrX	+	783	6	FSM	ENSMUSG00000002014.13	ENSMUST00000166518.8	800	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAAGACACGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	72830644	72834424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72830913_72832440_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002014.13_1	chrX	+	749	6	FSM	ENSMUSG00000002014.13	ENSMUST00000002090.3	765	6	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCAAGACACGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	72830675	72834424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72830913_72832443_72832560_72833405_72833481_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002014.13_2	chrX	+	489	5	FSM	ENSMUSG00000002014.13	ENST00000370085.3	505	5	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACAGTCACTATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	72830836	72834397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72830913_72832440_72832560_72833636_72833727_72833964_72834031_72834259
ENSMUSG00000002015.6_0	chrX	-	1210	8	FSM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATAAGGTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72759781	72729792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398_72758535_72759723
ENSMUSG00000002015.6_1	chrX	-	1146	7	ISM	ENSMUSG00000002015.6	ENSMUST00000002091.6	1219	8	1253	9	1253	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTATAAGGTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72758528	72729792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_72730202_72731442_72731544_72732265_72732387_72733152_72733289_72750602_72750751_72756050_72756152_72758398
ENSMUSG00000002015.6_12	chrX	-	346	3	FSM	ENSMUSG00000002015.6	ENST00000563143.2	361	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCAGTGTTTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72733276	72731446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72731544_72732265_72732387_72733148
ENSMUSG00000002017.11_0	chr17	-	2809	8	FSM	ENSMUSG00000002017.11	ENSMUST00000112507.4	2817	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGGAGTTTTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	75858933	75844080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_75845857_75845941_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ENSMUSG00000002017.11_4	chr17	-	2787	7	FSM	ENSMUSG00000002017.11	ENSMUST00000234785.2	2809	7	18	4	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTCTCCTTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75858839	75844093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_75846110_75846395_75846513_75847105_75847187_75848190_75848376_75851742_75851878_75854605_75854755_75858735
ENSMUSG00000002020.16_0	chr12	-	6744	36	FSM	ENSMUSG00000002020.16	ENSMUST00000002073.13	6769	36	18	7	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGACCCTTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84923288	84829992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838370_84838497_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84850560_84850690_84851130_84851260_84853073_84853188_84853944_84853985_84855198_84855219_84855921_84856138_84856358_84856524_84860013_84860137_84862735_84862811_84875221_84875325_84875907_84876192_84876789_84876997_84877416_84877588_84878521_84878698_84900460_84900714_84915450_84915522_84922529
ENSMUSG00000002020.16_5	chr12	-	6583	35	FSM	ENSMUSG00000002020.16	ENSMUST00000110254.9	6602	35	13	6	-3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGACCCTTCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84923256	84829992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84831170_84831527_84831678_84831977_84832260_84832501_84832670_84832747_84832886_84833129_84833259_84834139_84834224_84834677_84834870_84835857_84836002_84836531_84836658_84837015_84837148_84837768_84837892_84838370_84838497_84838595_84838719_84839730_84839857_84840392_84840519_84840717_84840841_84841814_84841935_84846145_84846266_84851130_84851260_84853073_84853188_84853944_84853985_84855198_84855219_84855921_84856138_84856358_84856524_84860013_84860137_84862735_84862811_84875221_84875325_84875907_84876192_84876789_84876997_84877416_84877588_84878521_84878698_84900460_84900714_84915450_84915522_84922529
ENSMUSG00000002028.14_0	chr9	-	16455	36	FSM	ENSMUSG00000002028.14	ENSMUST00000114689.8	16470	36	14	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTGAGCTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44792580	44714652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722037_44722198_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524_44734686_44735621_44735701_44735817_44735936_44736686_44736846_44738118_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745194_44745318_44747098_44747220_44747440_44747537_44747847_44747995_44752267_44752382_44752859_44752992_44753606_44753681_44753829_44754214_44754654_44754720_44756685_44756921_44758149_44758328_44758700_44761352_44764234_44764305_44792146
ENSMUSG00000002028.14_17	chr9	-	13570	36	FSM	ENSMUSG00000002028.14	ENSMUST00000002095.11	16461	36	3	2888	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCAAGGACTGAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	44792591	44717539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44719475_44720360_44720491_44721011_44721096_44721932_44722037_44722198_44722378_44724283_44724359_44725871_44726043_44727891_44727957_44729002_44729084_44729579_44733817_44733983_44734167_44734524_44734686_44735621_44735701_44735817_44735936_44736686_44736846_44738118_44738257_44740080_44740188_44740374_44740569_44741346_44741421_44741691_44741803_44742520_44742695_44744157_44744343_44745203_44745318_44747098_44747220_44747440_44747537_44747847_44747995_44752267_44752382_44752859_44752992_44753606_44753681_44753829_44754214_44754654_44754720_44756685_44756921_44758149_44758328_44758700_44761352_44764234_44764305_44792146
ENSMUSG00000002031.14_0	chr9	+	4132	12	FSM	ENSMUSG00000002031.14	ENSMUST00000002099.11	4169	12	31	6	31	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGTCAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44684237	44704738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44684471_44684984_44685082_44689858_44689936_44693396_44693531_44695027_44695103_44695256_44695351_44695628_44695758_44697590_44697713_44698134_44698202_44700863_44700925_44701187_44701274_44701781
ENSMUSG00000002032.18_0	chr9	-	1020	7	FSM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATGAGCAGAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	44710580	44706489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44706575_44706706_44706808_44706978_44707010_44707620_44707912_44709417_44709730_44709960_44710058_44710477
ENSMUSG00000002032.18_1	chr9	-	920	6	ISM	ENSMUSG00000002032.18	ENST00000442938.6	1033	7	530	3	453	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAATGAGCAGAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	44710060	44706489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_44706575_44706706_44706808_44706978_44707010_44707620_44707912_44709417_44709730_44709960
ENSMUSG00000002043.18_0	chr7	+	767	6	FSM	ENSMUSG00000002043.18	ENSMUST00000002112.15	785	6	11	7	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTGTGCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	19242647	19250063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19242758_19248125_19248194_19248346_19248465_19248931_19249016_19249128_19249223_19249770
ENSMUSG00000002052.7_0	chr11	-	6469	37	FSM	ENSMUSG00000002052.7	ENSMUST00000002121.5	6488	37	13	6	13	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAGGGGTTTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78136800	78097577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78098596_78098875_78099064_78099677_78099845_78099927_78100006_78100249_78100363_78102622_78102748_78102908_78103023_78103494_78103734_78104092_78104289_78107030_78107172_78108666_78108810_78109993_78110142_78110708_78110917_78111946_78112075_78112935_78113104_78113173_78113312_78113595_78113732_78113979_78114057_78115191_78115310_78115421_78115562_78116132_78116329_78116489_78116645_78116772_78116924_78117005_78117136_78117500_78117600_78117716_78117866_78119454_78119598_78119779_78119870_78120222_78120340_78120991_78121094_78121753_78122028_78122598_78122684_78122843_78123037_78123330_78123408_78123500_78123660_78124370_78124510_78136373
ENSMUSG00000002055.10_1	chr11	+	3870	24	FSM	ENSMUSG00000002055.10	ENSMUST00000045026.4	3887	24	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTTCCAGTCCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	78192367	78213279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78192537_78192720_78192847_78194871_78195867_78195968_78196147_78203940_78204016_78204173_78204267_78204338_78204474_78204645_78204766_78204989_78205083_78205168_78205283_78205530_78205625_78205786_78205935_78206013_78206117_78206334_78206469_78206725_78206868_78210292_78210405_78210811_78210899_78211157_78211279_78211386_78211499_78211868_78211950_78212087_78212244_78212323_78212399_78212511_78212593_78212953
ENSMUSG00000002057.5_0	chr11	-	3150	8	ISM	ENSMUSG00000002057.5	ENSMUST00000108294.2	3214	9	14589	2	14589	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGAGCCTTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78262795	78248404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_78249897_78251602_78252095_78252251_78252460_78256766_78256864_78257692_78257824_78259532_78259647_78261782_78262245_78262641
ENSMUSG00000002057.5_1	chr11	-	3206	9	FSM	ENSMUSG00000002057.5	ENSMUST00000108294.2	3214	9	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTGAGCCTTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78277378	78248404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78249897_78251602_78252095_78252251_78252460_78256766_78256864_78257692_78257824_78259532_78259647_78261782_78262245_78262641_78262794_78277320
ENSMUSG00000002058.14_0	chr11	+	1320	5	FSM	ENSMUSG00000002058.14	ENSMUST00000002127.14	1329	5	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTGTCTATAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	78234315	78239989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239356
ENSMUSG00000002058.14_1	chr11	+	1370	5	FSM	ENSMUSG00000002058.14	ENSMUST00000108295.8	1371	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTGTCTATAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	78234331	78239989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78234613_78238043_78238158_78238622_78238726_78238912_78239086_78239290
ENSMUSG00000002059.19_0	chr11	+	1356	11	FSM	ENSMUSG00000002059.19	ENSMUST00000002128.14	1368	11	5	7	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCATTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	78079260	78083007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78079338_78080003_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002059.19_5	chr11	+	1655	10	FSM	ENSMUSG00000002059.19	ENSMUST00000108322.9	1685	10	23	7	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCATTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	78079627	78083007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78080217_78080396_78080489_78080955_78081022_78081114_78081217_78081303_78081369_78081510_78081563_78082033_78082116_78082190_78082282_78082400_78082509_78082599
ENSMUSG00000002059.19_9	chr11	+	665	4	FSM	ENSMUSG00000002059.19	ENST00000636513.1	689	4	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACACCAAGTATGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	78079760	78081552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78080217_78081114_78081217_78081303_78081369_78081510
ENSMUSG00000002064.11_0	chr11	+	1256	3	FSM	ENSMUSG00000002064.11	ENSMUST00000002133.9	1268	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTGGTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	78136578	78146317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78136997_78141841_78142039_78145676
ENSMUSG00000002068.17_0	chr7	-	1158	5	FSM	ENSMUSG00000002068.17	ENST00000357943.9	1168	5	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	37800119	37797410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37799213_37799310_37799979
ENSMUSG00000002068.17_1	chr7	-	1985	12	FSM	ENSMUSG00000002068.17	ENSMUST00000108023.10	2000	12	13	2	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCTGTTCTTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	37806946	37797410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806109_37806211_37806255_37806746
ENSMUSG00000002068.17_2	chr7	-	1926	11	FSM	ENSMUSG00000002068.17	ENST00000262643.8	1939	11	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCAGCTGTTCTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	37806892	37797412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37798063_37798416_37798575_37798671_37798784_37798892_37799028_37799213_37799310_37799979_37800127_37802210_37802347_37802470_37802620_37805703_37805773_37806020_37806149_37806746
ENSMUSG00000002076.13_0	chr17	-	2785	7	ISM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	1115	0	1115	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACCTTGCAGGGATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32252367	32163742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234
ENSMUSG00000002076.13_1	chr17	-	3106	9	FSM	ENSMUSG00000002076.13	ENSMUST00000238192.2	3115	9	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTATACCTTGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	32255319	32163747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418_32253677_32255269
ENSMUSG00000002076.13_2	chr17	-	3009	8	FSM	ENSMUSG00000002076.13	ENSMUST00000002145.12	2867	8	-147	5	-118	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTATACCTTGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	32253629	32163747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32165786_32206321_32206426_32226649_32226768_32230149_32230283_32232291_32232442_32241739_32241844_32252234_32252386_32253418
ENSMUSG00000002083.14_0	chr7	+	1802	4	FSM	ENSMUSG00000002083.14	ENSMUST00000002152.13	1814	4	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGAACACTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	16043543	16052121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16043787_16046050_16046340_16047551_16047743_16051042
ENSMUSG00000002102.16_0	chr2	+	1627	12	FSM	ENSMUSG00000002102.16	ENSMUST00000067663.14	1636	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACAGTCTTTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	90884362	90889777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90884677_90884919_90885004_90885323_90885450_90885802_90885908_90885992_90886056_90886249_90886388_90887002_90887147_90887256_90887406_90888109_90888207_90888354_90888501_90889390_90889473_90889598
ENSMUSG00000002103.17_0	chr2	+	4638	11	FSM	ENSMUSG00000002103.17	ENSMUST00000239169.2	4652	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCTGGTAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	91033264	91044436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91033394_91033945_91034042_91034584_91034672_91036100_91036254_91036354_91036454_91036532_91036623_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_4	chr2	+	1254	8	FSM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAAACAAAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	91033951	91041376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91034042_91034584_91034672_91036100_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002103.17_7	chr2	+	1166	7	ISM	ENSMUSG00000002103.17	ENST00000529444.7	1270	8	638	9	638	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAAACAAAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	91034582	91041376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_91034672_91036100_91036254_91037061_91037195_91038161_91038245_91038384_91038492_91038605_91038782_91040951
ENSMUSG00000002104.12_0	chr2	+	1436	6	FSM	ENSMUSG00000002104.12	ENSMUST00000111445.10	1450	6	8	6	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGCTAGTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90865972	90876068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90875184_90875385_90875790
ENSMUSG00000002104.12_1	chr2	+	1442	7	FSM	ENSMUSG00000002104.12	ENSMUST00000111446.10	1458	7	13	3	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGCTAGTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90865984	90876068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90866334_90866891_90867231_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002104.12_3	chr2	+	1589	8	FSM	ENSMUSG00000002104.12	ENSMUST00000050323.6	1606	8	11	6	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGCTAGTGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90865996	90876068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90866334_90866891_90867231_90872198_90872358_90873304_90873404_90873484_90873608_90874035_90874090_90875184_90875385_90875790
ENSMUSG00000002105.16_0	chr2	-	2455	10	FSM	ENSMUSG00000002105.16	ENSMUST00000073575.12	2469	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCTGCCTCTTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	90900754	90892141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90893324_90893408_90893509_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775_90899085_90900499
ENSMUSG00000002105.16_10	chr2	-	1331	10	FSM	ENSMUSG00000002105.16	ENST00000533076.5	1347	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAAATAAATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	90899068	90892162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90892303_90893130_90893324_90893408_90893509_90893668_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775
ENSMUSG00000002105.16_22	chr2	-	761	2	FSM	ENSMUSG00000002105.16	ENST00000531974.5	778	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTCATCGCTGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	90899067	90896002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90896472_90898775
ENSMUSG00000002105.16_9	chr2	-	2181	9	FSM	ENSMUSG00000002105.16	ENST00000362021.9	2196	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAAATAAATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	90899069	90892162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90893324_90893408_90893526_90893664_90893798_90894000_90894052_90895059_90895150_90895250_90895353_90895926_90896046_90896357_90896472_90898775
ENSMUSG00000002107.19_0	chr2	-	7484	13	FSM	ENSMUSG00000002107.19	ENSMUST00000100429.11	7491	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTGGAAACAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	6726426	6544522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUSG00000002107.19_10	chr2	-	1729	13	ISM	ENSMUSG00000002107.19	ENST00000631816.1	1803	14	163304	8	1	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAAAAACATTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6726423	6550292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUSG00000002107.19_11	chr2	-	1794	14	FSM	ENSMUSG00000002107.19	ENST00000631816.1	1803	14	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAAAAACATTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6889726	6550292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558794_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6889662
ENSMUSG00000002107.19_3	chr2	-	5455	14	FSM	ENSMUSG00000002107.19	ENSMUST00000114934.11	5470	14	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATACTTGTTTCTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6889796	6546683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726425_6889662
ENSMUSG00000002107.19_55	chr2	-	3833	14	NNC	ENSMUSG00000002107.19	novel	3852	14	NA	NA	14	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAATGCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7086099	6548247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_6550487_6551852_6552025_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726427_6967189_6967226_7085917
ENSMUSG00000002107.19_83	chr2	-	2515	15	NNC	ENSMUSG00000002107.19	novel	2525	15	NA	NA	8	-4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTAAAACAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7086045	6549655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_6550487_6551852_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227_6726427_6967189_6967226_7085917
ENSMUSG00000002107.19_9	chr2	-	3685	12	FSM	ENSMUSG00000002107.19	ENST00000636488.1	3701	12	8	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACAAGCTTAGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	6726418	6549679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6552025_6554642_6554787_6558595_6558776_6565481_6565602_6590784_6590920_6604844_6604909_6608834_6608994_6612692_6612773_6620498_6620634_6629481_6629531_6668925_6669009_6726227
ENSMUSG00000002108.11_0	chr2	-	1807	10	FSM	ENSMUSG00000002108.11	ENST00000441012.7	1829	10	19	3	19	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATCGCTTTGTGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	91025101	91014352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91014828_91014999_91015095_91015286_91015401_91020529_91020630_91020806_91020987_91021083_91021293_91022133_91022401_91022904_91023088_91023961_91024042_91024997
ENSMUSG00000002108.11_4	chr2	-	1948	10	FSM	ENSMUSG00000002108.11	ENSMUST00000111356.8	1955	10	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCCTCTACCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91025374	91014406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91014828_91014999_91015095_91015286_91015401_91020529_91020630_91020806_91020987_91021083_91021293_91022133_91022401_91022904_91023088_91023961_91024042_91025075
ENSMUSG00000002109.15_0	chr2	-	959	7	FSM	ENSMUSG00000002109.15	ENST00000378603.7	976	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGGATACTCCGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	91067150	91042820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91042960_91047010_91047154_91047397_91047576_91047651_91047752_91049088_91049235_91065159_91065297_91067034
ENSMUSG00000002129.12_0	chr11	+	4909	16	FSM	ENSMUSG00000002129.12	ENSMUST00000002198.4	4920	16	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGCCCTCCATTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4110357	4132538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4110551_4111045_4111168_4116495_4116704_4117632_4117891_4121061_4121137_4123079_4123231_4124031_4124220_4125035_4125154_4125394_4125581_4126269_4126392_4126480_4126727_4127412_4127621_4128070_4128226_4129140_4129243_4129353_4129426_4130033
ENSMUSG00000002205.17_0	chr7	+	1951	15	FSM	ENSMUSG00000002205.17	ENSMUST00000002275.15	1969	15	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAGTCTGGAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44397847	44426932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419078_44420287_44420347_44424799_44424960_44426645
ENSMUSG00000002205.17_10	chr7	+	964	9	FSM	ENSMUSG00000002205.17	ENST00000601912.5	980	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACCGAAAAGATAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	44403248	44419045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956
ENSMUSG00000002205.17_12	chr7	+	1353	11	FSM	ENSMUSG00000002205.17	ENST00000316763.8	1366	11	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGGTGAGGAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44403243	44424952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_3	chr7	+	1481	13	FSM	ENSMUSG00000002205.17	ENST00000599538.5	1490	13	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGGTGAGGAGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44398013	44424952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44407169_44407320_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_4	chr7	+	1365	12	FSM	ENSMUSG00000002205.17	ENST00000601341.5	1372	12	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACCCAAGCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44398013	44424986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44398076_44401538_44401601_44403239_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002205.17_7	chr7	+	1295	11	ISM	ENSMUSG00000002205.17	ENST00000601341.5	1372	12	3535	5	-1691	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACCCAAGCCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44401546	44424986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_44401601_44403239_44403380_44409123_44409319_44410301_44410367_44412414_44412482_44413548_44413634_44414206_44414313_44416545_44416639_44417866_44418000_44418956_44419127_44424799
ENSMUSG00000002210.12_0	chr7	+	2235	14	FSM	ENSMUSG00000002210.12	ENSMUST00000002280.11	2242	14	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTTTGTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	24099050	24122203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24099317_24102816_24102973_24104951_24105027_24105112_24105378_24105459_24105558_24106945_24107059_24114363_24114476_24115923_24116020_24116345_24116432_24119438_24119546_24120000_24120109_24120237_24120367_24120544_24120690_24121724
ENSMUSG00000002221.12_0	chr5	-	5833	21	FSM	ENSMUSG00000002221.12	ENSMUST00000002291.12	5850	21	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCTAAAGTGAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27996541	27945087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_27947502_27949112_27949174_27949254_27949331_27949418_27949554_27953811_27953913_27955960_27956130_27957741_27957845_27959482_27959554_27961950_27961995_27963428_27963614_27964367_27964490_27964970_27965109_27966574_27966671_27970135_27970231_27970588_27971289_27977001_27977623_27980563_27980678_27986419_27986484_27988727_27988772_27993640_27993776_27996196
ENSMUSG00000002222.15_0	chr6	-	6154	9	FSM	ENSMUSG00000002222.15	ENSMUST00000002292.15	6165	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGATCCAGTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	71417610	71365617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71370173_71371608_71371764_71373835_71373939_71375344_71375511_71376110_71376278_71390233_71390335_71391768_71391904_71406001_71406145_71416981
ENSMUSG00000002227.16_0	chr3	-	3488	20	FSM	ENSMUSG00000002227.16	ENSMUST00000002297.12	3498	20	6	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAAGCCTCTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	104725552	104702155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711702_104711786_104712030_104712219_104712424_104725251
ENSMUSG00000002227.16_1	chr3	-	3456	21	FSM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAAGCCTCTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	104725621	104702155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251_104725473_104725573
ENSMUSG00000002227.16_4	chr3	-	3399	20	ISM	ENSMUSG00000002227.16	ENSMUST00000168015.8	3460	21	158	4	95	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAAGCCTCTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	104725463	104702155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_104702557_104702640_104702763_104703009_104703099_104703175_104703302_104704082_104704158_104704285_104704478_104704590_104704709_104706707_104706925_104707013_104707112_104707261_104707366_104707590_104707750_104708002_104708151_104708272_104708450_104708713_104708869_104709741_104709911_104710108_104710244_104711446_104711709_104711793_104712030_104712219_104712424_104725251
ENSMUSG00000002228.8_0	chr3	+	2316	11	FSM	ENSMUSG00000002228.8	ENST00000464951.1	2336	11	9	11	9	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGATAAACGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	104688421	104693323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104689499_104689916_104690038_104690442_104690554_104690670_104690731_104690969_104691083_104691358_104691444_104691949_104692069_104692271_104692336_104692501_104692610_104692713_104692866_104693017
ENSMUSG00000002233.14_0	chr3	+	1186	5	FSM	ENSMUSG00000002233.14	ENSMUST00000002303.12	1202	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4960	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGTGTGGCAGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	104696213	104701769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104696400_104699204_104699369_104699880_104700002_104700215_104700347_104701185
ENSMUSG00000002249.22_0	chr17	-	2440	13	FSM	ENSMUSG00000002249.22	ENSMUST00000114799.8	2448	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAGTCAAAAACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28569574	28550656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28554458_28554471_28555484_28555548_28559127_28559193_28560322_28560575_28569541
ENSMUSG00000002249.22_1	chr17	-	2747	12	NIC	ENSMUSG00000002249.22	novel	2775	13	NA	NA	4	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAGTCAAAAACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28569316	28550656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555484_28555548_28559127_28559193_28560322_28560575_28568964
ENSMUSG00000002249.22_2	chr17	-	2741	13	FSM	ENSMUSG00000002249.22	ENSMUST00000154873.9	2775	13	25	9	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTCAAAAACAGGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	28569295	28550653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28554458_28554471_28555484_28555548_28559127_28559193_28560322_28560575_28568964
ENSMUSG00000002249.22_3	chr17	-	2355	12	ISM	ENSMUSG00000002249.22	ENSMUST00000154873.9	2775	13	8802	8	8802	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAAACAGGTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	28560518	28550652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28554458_28554471_28555484_28555548_28559127_28559193_28560322
ENSMUSG00000002249.22_6	chr17	-	2372	11	NIC	ENSMUSG00000002249.22	novel	2775	13	NA	NA	8769	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAGTCAAAAACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28560551	28550656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555484_28555548_28559127_28559193_28560322
ENSMUSG00000002249.22_8	chr17	-	2519	12	NIC	ENSMUSG00000002249.22	novel	2585	13	NA	NA	52	-2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTGTGCCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	28569739	28550689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28555484_28555548_28559127_28559193_28560322_28560575_28569582
ENSMUSG00000002249.22_9	chr17	-	2577	13	FSM	ENSMUSG00000002249.22	ENSMUST00000156862.3	2585	13	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAGTTGTGCCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	28569785	28550689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28551808_28551924_28552078_28552165_28552307_28552479_28552654_28552764_28552911_28553357_28553420_28553677_28553728_28553872_28554011_28554458_28554471_28555484_28555548_28559127_28559193_28560322_28560575_28569582
ENSMUSG00000002250.17_0	chr17	+	3268	8	FSM	ENSMUSG00000002250.17	ENSMUST00000002320.16	3277	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGACTTGTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	28451673	28520439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28451839_28455985_28456070_28505234_28505442_28514314_28514470_28516059_28516199_28517250_28517454_28517557_28518009_28518575
ENSMUSG00000002257.9_0	chr17	+	2260	11	FSM	ENSMUSG00000002257.9	ENSMUST00000002327.6	2277	11	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCCTGCCCTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28426764	28447578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28426913_28435938_28436080_28436574_28436761_28438718_28438956_28439050_28439198_28442645_28442755_28442861_28443161_28444818_28444986_28445074_28445274_28446780_28446872_28447042
ENSMUSG00000002265.18_0	chr7	-	8957	9	FSM	ENSMUSG00000002265.18	ENSMUST00000239104.2	8986	9	16	13	16	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAGATAATTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6733404	6706903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721848_6729488_6729574_6733256
ENSMUSG00000002265.18_1	chr7	-	8663	9	FSM	ENSMUSG00000002265.18	ENSMUST00000051209.11	8694	9	12	19	12	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAAAATAAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	6733408	6706909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6714731_6714849_6714943_6715671_6715775_6719052_6719157_6720111_6720196_6720797_6720888_6721424_6721556_6729488_6729574_6733256
ENSMUSG00000002266.18_0	chr7	-	7689	8	FSM	ENSMUSG00000002266.18	ENSMUST00000002336.16	7693	8	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAGCCAATGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	6699449	6674271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6681262_6685048_6685181_6685738_6685866_6690682_6690775_6691622_6691689_6692486_6692564_6698648_6698772_6699367
ENSMUSG00000002266.18_1	chr7	-	7609	7	ISM	ENSMUSG00000002266.18	ENSMUST00000002336.16	7693	8	676	4	655	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAGCCAATGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	6698773	6674271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_6681262_6685048_6685181_6685738_6685866_6690682_6690775_6691622_6691689_6692486_6692564_6698648
ENSMUSG00000002266.18_2	chr7	-	3050	8	FSM	ENSMUSG00000002266.18	ENSMUST00000122432.4	3060	8	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTGTTGAGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	6699422	6679009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6681262_6685048_6685181_6685738_6685866_6690682_6690775_6691622_6691811_6692482_6692564_6698648_6698772_6699367
ENSMUSG00000002266.18_3	chr7	-	2978	7	ISM	ENSMUSG00000002266.18	ENSMUST00000122432.4	3060	8	670	8	670	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAATTTTCTGTTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6698758	6679013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_6681262_6685048_6685181_6685738_6685866_6690682_6690775_6691622_6691811_6692482_6692564_6698648
ENSMUSG00000002274.14_0	chr17	-	2743	4	FSM	ENSMUSG00000002274.14	ENSMUST00000165838.9	2751	4	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTTTTGGAGGGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	26016050	26012195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26014266_26014347_26014408_26015214_26015616_26015838
ENSMUSG00000002274.14_1	chr17	-	988	3	FSM	ENSMUSG00000002274.14	ENSMUST00000236963.2	1010	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACCAGCCACTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	26015684	26013807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26014266_26014347_26014408_26015214
ENSMUSG00000002274.14_2	chr17	-	777	3	FSM	ENSMUSG00000002274.14	ENSMUST00000238040.2	780	3	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACAGTGAGCTGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	26015942	26013843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26014408_26015214_26015324_26015838
ENSMUSG00000002279.20_3	chr17	+	1844	10	NIC	ENSMUSG00000002279.20	novel	1858	11	NA	NA	0	-3	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCAGCCTCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25798150	25881797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_25798354_25804516_25804827_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002279.20_4	chr17	+	1847	11	FSM	ENSMUSG00000002279.20	ENSMUST00000116641.9	1858	11	8	3	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTCAGCCTCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25798158	25881797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25798354_25804516_25804827_25807649_25807661_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358_25874543_25874974_25875088_25881487
ENSMUSG00000002279.20_6	chr17	+	1404	8	FSM	ENSMUSG00000002279.20	ENST00000262301.16	1416	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACCCACCATGCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	25798169	25874540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25798354_25804516_25804831_25831269_25831419_25850708_25850775_25864122_25864291_25873393_25873581_25874061_25874216_25874358
ENSMUSG00000002280.12_0	chr17	+	2044	11	FSM	ENSMUSG00000002280.12	ENSMUST00000134108.8	2062	11	18	0	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATCCACTGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25992767	26001765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000166_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_19	chr17	+	1360	10	ISM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	1238	3	1238	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCTTGAGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25994021	26001226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_2	chr17	+	2539	11	FSM	ENSMUSG00000002280.12	ENSMUST00000002350.11	2555	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTCCTAACTACTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25992759	26002300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999927_26000214_26000353_26000661_26000820_26000989
ENSMUSG00000002280.12_8	chr17	+	1436	11	FSM	ENSMUSG00000002280.12	ENST00000251588.7	1443	11	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCCTTGAGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25992787	26001226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25992862_25994019_25994116_25995939_25996084_25996298_25996432_25997923_25998059_25998471_25998591_25999280_25999411_25999853_25999935_26000223_26000353_26000661_26000820_26000989
ENSMUSG00000002289.17_0	chr17	-	3288	7	FSM	ENSMUSG00000002289.17	ENSMUST00000002360.17	3308	7	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGTTAAAAAAGTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34000796	33992735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33994543_33995923_33996206_33996293_33996390_33997345_33997460_33999503_33999622_33999756_33999868_34000036
ENSMUSG00000002297.17_0	chr5	-	2381	12	FSM	ENSMUSG00000002297.17	ENSMUST00000002368.16	2401	12	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCACTGAAAATAATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	8472665	8446977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454914_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUSG00000002297.17_7	chr5	-	2382	12	FSM	ENSMUSG00000002297.17	ENSMUST00000171808.8	2402	12	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATATTCCTGAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	8472704	8447018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_8448163_8449687_8449813_8453079_8453192_8453611_8453741_8454870_8454917_8455801_8455839_8458233_8458311_8458493_8458564_8460009_8460061_8462120_8462301_8471220_8471394_8472466
ENSMUSG00000002307.17_0	chr17	+	2558	8	FSM	ENSMUSG00000002307.17	ENSMUST00000079421.15	2581	8	17	6	17	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTCTTTCCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	34128435	34134558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34128573_34129404_34129646_34130211_34131044_34131131_34131344_34131561_34131782_34132246_34132701_34132816_34133037_34134316
ENSMUSG00000002308.17_0	chr17	+	2201	5	FSM	ENSMUSG00000002308.17	ENSMUST00000002379.15	2209	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCATGGAAACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	34062072	34068748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34062266_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ENSMUSG00000002308.17_5	chr17	+	1186	5	FSM	ENSMUSG00000002308.17	ENSMUST00000087559.8	1191	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTCTGTCTGCCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	34062399	34067720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34062606_34064989_34065116_34066468_34066700_34066990_34067153_34067259
ENSMUSG00000002319.17_1	chr14	-	3822	30	FSM	ENSMUSG00000002319.17	ENSMUST00000047131.16	3846	30	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAGGCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55873133	55862872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55863499_55863610_55863681_55864796_55864902_55864991_55865125_55865241_55865451_55865562_55865689_55866048_55866097_55866250_55866445_55866523_55866633_55866716_55866775_55866850_55866929_55867205_55867325_55867434_55867547_55867751_55867873_55868054_55868169_55868273_55868388_55868598_55868729_55868888_55868998_55869489_55869600_55869756_55869811_55870417_55870583_55870790_55870875_55870961_55871064_55871168_55871235_55871471_55871652_55871736_55871867_55872461_55872504_55872588_55872669_55872819_55872907_55872986
ENSMUSG00000002320.16_0	chr14	-	2489	6	FSM	ENSMUSG00000002320.16	ENSMUST00000122358.8	2517	6	14	14	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGAAAAAGGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55881249	55873435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880838
ENSMUSG00000002320.16_2	chr14	-	2147	6	FSM	ENSMUSG00000002320.16	ENSMUST00000120041.8	2164	6	3	14	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGAAAAAGGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55880705	55873435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880636
ENSMUSG00000002320.16_3	chr14	-	2357	5	FSM	ENSMUSG00000002320.16	ENSMUST00000002391.15	2382	5	14	11	-11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAGGAATATATATATT	NA	NA	NA	NA	NA	NA	NA	NA	55880783	55873527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUSG00000002320.16_5	chr14	-	2365	5	FSM	ENSMUSG00000002320.16	ENSMUST00000121937.8	2398	5	16	17	16	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTATTAAGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55880756	55873441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55874070_55875366_55875590_55877841_55878028_55878423_55879046_55880050
ENSMUSG00000002320.16_8	chr14	-	2136	6	FSM	ENSMUSG00000002320.16	ENSMUST00000121791.8	2148	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTCTTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	55880804	55873473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55874070_55875315_55875590_55877841_55878028_55878423_55879046_55880050_55880413_55880708
ENSMUSG00000002325.16_1	chr14	+	1131	7	FSM	ENSMUSG00000002325.16	ENST00000396864.8	1151	7	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCAGAAGAGGAGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	55842518	55846413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55842690_55843177_55843362_55843549_55843691_55843774_55843896_55844950_55845313_55846141_55846258_55846377
ENSMUSG00000002326.7_0	chr14	+	1979	10	FSM	ENSMUSG00000002326.7	ENSMUST00000002397.7	1993	10	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAACTCAAGTCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55909701	55916653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55909842_55910162_55910259_55910406_55910527_55912783_55912868_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_10	chr14	+	927	9	FSM	ENSMUSG00000002326.7	ENST00000559910.5	936	9	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTCCCAGTAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	55910177	55915855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55910259_55910406_55910527_55912783_55912868_55913015_55913091_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_21	chr14	+	863	7	ISM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	234	2	234	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTCCCAGTAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	55910404	55915855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55910527_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002326.7_5	chr14	+	943	8	FSM	ENSMUSG00000002326.7	ENST00000456667.7	951	8	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTCCCAGTAGACCCA	NA	NA	NA	NA	NA	NA	NA	NA	55910176	55915855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55910259_55910406_55910527_55913015_55913190_55914211_55914294_55914384_55914492_55914662_55914706_55915327_55915488_55915680
ENSMUSG00000002329.8_0	chr14	-	1706	6	FSM	ENSMUSG00000002329.8	ENSMUST00000002400.7	1733	6	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAAGACAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55897952	55895349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55896532_55896656_55896743_55896826_55896935_55897444_55897556_55897624_55897686_55897794
ENSMUSG00000002332.17_0	chr14	-	1463	9	FSM	ENSMUSG00000002332.17	ENSMUST00000002403.10	1477	9	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGAGTTCTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	55983135	55976478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55976878_55977008_55977090_55977392_55977463_55978183_55978331_55978639_55978773_55980910_55980991_55981114_55981259_55982374_55982546_55982897
ENSMUSG00000002342.18_0	chr8	+	3012	12	FSM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATTCCTGGATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	70625054	70636325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70625091_70626952_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_2	chr8	+	2080	11	FSM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70625057	70635500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70625091_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_22	chr8	+	1262	10	ISM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	2540	3	2540	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGAAGGCACTAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70629491	70634787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_24	chr8	+	2040	10	ISM	ENSMUSG00000002342.18	ENSMUST00000182980.8	2080	11	4444	0	2550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTTACCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70629501	70635500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_5	chr8	+	2967	11	ISM	ENSMUSG00000002342.18	ENSMUST00000002413.15	3018	12	1907	6	10	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATTCCTGGATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	70626961	70636325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630101_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_6	chr8	+	1120	9	FSM	ENSMUSG00000002342.18	ENST00000450333.6	1133	9	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGAAGGCACTAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70626961	70634787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70627057_70629494_70629576_70629890_70629989_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002342.18_7	chr8	+	1358	11	FSM	ENSMUSG00000002342.18	ENST00000587583.6	1367	11	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGAAGGCACTAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70626957	70634787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70627057_70629494_70629576_70629890_70629989_70630176_70630259_70631516_70631669_70633188_70633250_70633355_70633500_70633585_70633700_70633798_70633974_70634079_70634177_70634532
ENSMUSG00000002343.12_0	chr8	-	2241	8	FSM	ENSMUSG00000002343.12	ENSMUST00000019679.12	2263	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAAAGCTTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	70687103	70672830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70673528_70674755_70674894_70675167_70675300_70676193_70676340_70677549_70678124_70682177_70682261_70683929_70684057_70686759
ENSMUSG00000002345.19_0	chr8	+	799	6	FSM	ENSMUSG00000002345.19	ENSMUST00000002418.15	810	6	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCGTCTCTTTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	70592159	70599906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70592423_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUSG00000002345.19_5	chr8	+	662	6	FSM	ENSMUSG00000002345.19	ENSMUST00000110139.2	679	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCGCCCTGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	70592936	70599962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70593007_70594513_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUSG00000002345.19_7	chr8	+	585	5	ISM	ENSMUSG00000002345.19	ENSMUST00000110139.2	679	6	1594	7	1594	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCGCCCTGCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	70594520	70599962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_70594627_70595123_70595189_70597673_70597785_70598460_70598541_70599739
ENSMUSG00000002365.11_0	chr17	+	3310	18	FSM	ENSMUSG00000002365.11	ENSMUST00000002436.11	3331	18	13	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGTACAGCAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	5891616	5982221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978479_5978572_5980844
ENSMUSG00000002365.11_4	chr17	+	2455	18	FSM	ENSMUSG00000002365.11	ENST00000681186.1	2472	18	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTCCCGGGATAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5891620	5981392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5891822_5937271_5937359_5940349_5940425_5942048_5942175_5949601_5949771_5952638_5952790_5955163_5955249_5958628_5958755_5958856_5958975_5968654_5968786_5970345_5970450_5970844_5970949_5972404_5972483_5974879_5974957_5976346_5976437_5977480_5977596_5978501_5978572_5980844
ENSMUSG00000002372.10_0	chr17	+	2366	16	FSM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56980357	57018757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56980412_56993005_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_11	chr17	+	2512	16	ISM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	12642	7	12642	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56993006	57018757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_6	chr17	+	2560	17	FSM	ENSMUSG00000002372.10	ENSMUST00000233319.2	2567	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56980364	57018757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56980412_56993005_56993062_56999520_56999722_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002372.10_9	chr17	+	2310	15	ISM	ENSMUSG00000002372.10	ENSMUST00000002445.10	2373	16	12650	7	12643	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAGCCCCAGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56993007	57018757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56993062_57003601_57003639_57003717_57003790_57008022_57008089_57008448_57008542_57009762_57009891_57012456_57012571_57013861_57013966_57014162_57014239_57014850_57014954_57015170_57015281_57016213_57016335_57017087_57017231_57017590_57017778_57017855
ENSMUSG00000002379.8_0	chr17	+	535	4	FSM	ENSMUSG00000002379.8	ENSMUST00000002452.8	545	4	10	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATGTCTTAAAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	57024776	57029137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57024943_57028034_57028128_57028318_57028442_57028984
ENSMUSG00000002379.8_1	chr17	+	481	4	FSM	ENSMUSG00000002379.8	ENSMUST00000233832.2	493	4	11	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCTTAAAGGCAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57024793	57029140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57024943_57028034_57028128_57028358_57028442_57028984
ENSMUSG00000002393.15_0	chr8	-	2207	4	FSM	ENSMUSG00000002393.15	ENSMUST00000002466.9	2218	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTCAGCCTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	71834593	71826770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71827399_71828392_71828918_71831032_71831128_71833634
ENSMUSG00000002395.15_0	chr8	+	1001	9	FSM	ENSMUSG00000002395.15	ENSMUST00000110054.8	973	9	-36	8	-36	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71819549	71822368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71819723_71819878_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_4	chr8	+	832	8	FSM	ENSMUSG00000002395.15	ENSMUST00000019169.8	854	8	14	8	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71819874	71822368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821193_71821207_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002395.15_5	chr8	+	824	7	NIC	ENSMUSG00000002395.15	novel	854	8	NA	NA	9	-5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAACCCACATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	71819869	71822368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_71820014_71820287_71820338_71820413_71820493_71820602_71820756_71821493_71821522_71821775_71821948_71822170
ENSMUSG00000002396.9_0	chr8	+	2166	3	FSM	ENSMUSG00000002396.9	ENSMUST00000110051.2	2179	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGTCTTTAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	71823947	71827019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71824630_71825392_71825447_71825589
ENSMUSG00000002396.9_1	chr8	+	1588	4	FSM	ENSMUSG00000002396.9	ENSMUST00000002469.9	1611	4	13	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGACCAGGCTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	71823995	71826323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71824630_71825111_71825278_71825392_71825447_71825589
ENSMUSG00000002396.9_3	chr8	+	5280	2	FSM	ENSMUSG00000002396.9	ENSMUST00000110052.2	5285	2	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAAGTGATATATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	71823990	71832001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71824630_71827360
ENSMUSG00000002409.19_0	chr7	+	2437	12	FSM	ENSMUSG00000002409.19	ENST00000348817.7	2447	12	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGCCTGAGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	27878903	27886716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27879066_27880933_27881098_27881785_27881906_27882003_27882193_27882488_27882637_27883665_27883953_27884492_27884640_27884720_27884862_27885138_27885175_27885258_27885455_27885786_27885894_27885976
ENSMUSG00000002413.16_0	chr6	-	9712	22	FSM	ENSMUSG00000002413.16	ENSMUST00000002487.15	9728	22	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAGAAACCTTAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	39702390	39580179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39587339_39591065_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39623658_39623779_39625383_39625421_39625754_39625791_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654407_39654505_39654576_39665177_39665280_39702040
ENSMUSG00000002413.16_2	chr6	-	2644	18	FSM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTAGGCTAGCCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	39702121	39590648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177_39665280_39702040
ENSMUSG00000002413.16_3	chr6	-	2564	17	ISM	ENSMUSG00000002413.16	ENST00000445336.2	2657	18	36845	9	36845	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGGCTAGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	39665281	39590649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_39591220_39592594_39592730_39600512_39600645_39604655_39604775_39605542_39605590_39616523_39616701_39617384_39617470_39620033_39620152_39621171_39621315_39625383_39625421_39628538_39628699_39637806_39637924_39638937_39639087_39641937_39642041_39643179_39643284_39654311_39654576_39665177
ENSMUSG00000002416.14_0	chr6	+	4354	4	FSM	ENSMUSG00000002416.14	ENSMUST00000135671.8	4371	4	11	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATTTTCAGCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	39569518	39580310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_39569647_39573384_39573530_39575199_39575296_39576325
ENSMUSG00000002416.14_2	chr6	+	437	4	FSM	ENSMUSG00000002416.14	ENSMUST00000119379.2	455	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTGAGTTATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	39569526	39576397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_39569647_39573384_39573530_39575199_39575300_39576325
ENSMUSG00000002428.13_2	chr3	+	3915	23	FSM	ENSMUSG00000002428.13	ENST00000465259.5	3936	23	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATCTCTTCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20113073	20171815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20113271_20117981_20118149_20118729_20118864_20119485_20119584_20121509_20121585_20123129_20123322_20126532_20126629_20130584_20130749_20136915_20136996_20137074_20137120_20137913_20137999_20140259_20140358_20145640_20145785_20146841_20146981_20152243_20152380_20153939_20154120_20159804_20159930_20160513_20160693_20162161_20162288_20162918_20163032_20163468_20163650_20167519_20167601_20170735
ENSMUSG00000002455.15_0	chr2	+	3039	21	FSM	ENSMUSG00000002455.15	ENSMUST00000002529.7	3054	21	7	8	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTTATGTTGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	181243118	181297445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181243325_181249912_181250082_181257769_181257889_181262361_181262441_181263579_181263757_181263954_181264111_181273227_181273323_181273723_181273881_181274547_181274711_181277825_181277945_181278685_181278905_181282384_181282508_181287263_181287386_181289081_181289221_181290818_181290939_181291214_181291392_181291889_181292024_181292878_181292971_181294226_181294342_181296628_181296756_181297214
ENSMUSG00000002458.14_0	chr2	-	1495	6	FSM	ENSMUSG00000002458.14	ENSMUST00000002532.9	1511	6	6	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACCTACTACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	181335764	181330224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181331089_181331169_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUSG00000002458.14_4	chr2	-	1454	5	FSM	ENSMUSG00000002458.14	ENSMUST00000108769.8	1460	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGCAAAGCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	181335723	181330305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181331405_181331494_181331570_181333025_181333148_181333282_181333389_181335671
ENSMUSG00000002458.14_6	chr2	-	809	6	FSM	ENSMUSG00000002458.14	ENST00000332298.9	818	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCATTTGTCACACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	181335760	181330901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181331089_181331169_181331405_181331490_181331570_181333025_181333148_181333282_181333380_181335671
ENSMUSG00000002458.14_7	chr2	-	721	5	ISM	ENSMUSG00000002458.14	ENST00000332298.9	818	6	2386	3	230	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCATTTGTCACACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	181333380	181330901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_181331089_181331169_181331405_181331490_181331570_181333025_181333148_181333282
ENSMUSG00000002459.18_0	chr1	-	1753	5	FSM	ENSMUSG00000002459.18	ENSMUST00000002533.15	1778	5	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAGATATGTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	5089741	4979802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4980886_4982536_4982772_4987119_4987204_4994069_4994213_5089533
ENSMUSG00000002475.17_0	chr18	-	1943	9	FSM	ENSMUSG00000002475.17	ENSMUST00000117828.9	1962	9	12	7	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAAGTTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	10706759	10644417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10645236_10647725_10647892_10647969_10648019_10652187_10652362_10658779_10658893_10682068_10682115_10704547_10704731_10706000_10706165_10706529
ENSMUSG00000002477.6_0	chr18	+	849	4	FSM	ENSMUSG00000002477.6	ENSMUST00000002551.5	858	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGGTGCATGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	10617783	10628230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_10617927_10623630_10623708_10626825_10627018_10627793
ENSMUSG00000002477.6_1	chr18	+	432	4	FSM	ENSMUSG00000002477.6	ENSMUST00000234207.2	439	4	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACATAAGTGTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	10617798	10627951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_10617927_10623630_10623708_10626948_10627018_10627793
ENSMUSG00000002477.6_2	chr18	+	462	3	FSM	ENSMUSG00000002477.6	ENST00000582475.1	465	3	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGTATCTACTATATTC	NA	NA	NA	NA	NA	NA	NA	NA	10617868	10628005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_10617927_10626825_10627018_10627793
ENSMUSG00000002477.6_5	chr18	+	396	2	ISM	ENSMUSG00000002477.6	ENST00000582475.1	465	3	8965	3	8965	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAGTATCTACTATATTC	NA	NA	NA	NA	NA	NA	NA	NA	10626833	10628005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_10627018_10627793
ENSMUSG00000002486.16_0	chr5	+	2866	13	FSM	ENSMUSG00000002486.16	ENSMUST00000094441.11	2882	13	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATCACCTCAGGCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	114845829	114860381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114846022_114846714_114846900_114847367_114847579_114849313_114849371_114851484_114851554_114852688_114852863_114853613_114853727_114853895_114853963_114855497_114855671_114856439_114856522_114857639_114857826_114858185_114858330_114859168
ENSMUSG00000002496.11_1	chr17	-	6249	41	FSM	ENSMUSG00000002496.11	ENSMUST00000226284.2	6266	41	17	0	-2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCACTTGGTCCAATACT	NA	NA	NA	NA	NA	NA	NA	NA	24851584	24814789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUSG00000002496.11_10	chr17	-	5378	39	ISM	ENSMUSG00000002496.11	ENSMUST00000226398.2	5459	40	506	6	493	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTCTTTATTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	24851076	24815449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918
ENSMUSG00000002496.11_13	chr17	-	5444	40	FSM	ENSMUSG00000002496.11	ENSMUST00000226398.2	5459	40	7	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCTTCTTTATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24851575	24815451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851081_24851511
ENSMUSG00000002496.11_15	chr17	-	5591	42	FSM	ENSMUSG00000002496.11	ENSMUST00000227745.2	5598	42	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGCACATCTGGCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	24851568	24815500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUSG00000002496.11_17	chr17	-	5534	41	ISM	ENSMUSG00000002496.11	ENSMUST00000227745.2	5598	42	483	7	483	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGCACATCTGGCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	24851086	24815501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24820362_24820432_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24825197_24825327_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918
ENSMUSG00000002496.11_7	chr17	-	6000	40	FSM	ENSMUSG00000002496.11	ENSMUST00000097373.2	6018	40	11	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTCCCTCCAGCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	24851592	24814917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24815741_24815828_24815928_24816019_24816112_24816178_24816258_24816865_24817006_24817157_24817345_24817998_24818086_24818253_24818330_24818530_24819022_24819308_24819440_24821067_24821272_24822059_24822273_24823279_24823393_24823479_24823633_24823801_24823967_24826410_24826506_24826672_24826776_24827068_24827163_24827917_24828108_24829410_24829546_24832164_24832288_24833325_24833477_24833657_24833765_24834450_24834574_24837839_24837957_24838388_24838545_24839723_24839806_24840033_24840138_24840600_24840739_24841498_24841643_24842449_24842577_24844241_24844316_24845219_24845346_24845668_24845718_24846964_24847083_24847915_24848061_24848842_24848954_24849886_24849974_24850918_24851086_24851511
ENSMUSG00000002504.16_0	chr17	-	1687	6	FSM	ENSMUSG00000002504.16	ENSMUST00000019684.13	1717	6	28	2	-5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24863936	24858261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24863792
ENSMUSG00000002504.16_1	chr17	-	2022	6	FSM	ENSMUSG00000002504.16	ENSMUST00000234557.2	2035	6	11	2	11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24869252	24858261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24859364_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002504.16_2	chr17	-	2127	7	FSM	ENSMUSG00000002504.16	ENSMUST00000002572.6	2136	7	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGGCGCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24869294	24858261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24859364_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002504.16_3	chr17	-	1467	7	FSM	ENSMUSG00000002504.16	ENST00000432365.6	1477	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCACCCTGTCAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	24869142	24858736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24859331_24859568_24859632_24860682_24860727_24860792_24860947_24861164_24861345_24866500_24866702_24868911
ENSMUSG00000002524.18_0	chr15	-	1878	12	FSM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	1	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	75952761	75942032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUSG00000002524.18_1	chr15	-	1811	11	ISM	ENSMUSG00000002524.18	ENSMUST00000100527.13	1881	12	3215	2	3192	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCCTGTGTCTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	75949547	75942032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75946455_75946507_75947390_75947481_75947585_75947682_75949449
ENSMUSG00000002524.18_13	chr15	-	1747	10	ISM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	3214	7	3192	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGCCCTGAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	75949547	75942045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449
ENSMUSG00000002524.18_14	chr15	-	1814	11	FSM	ENSMUSG00000002524.18	ENSMUST00000002599.11	1821	11	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGCCCTGAAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	75952761	75942045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75949449_75949552_75952698
ENSMUSG00000002524.18_18	chr15	-	1558	10	FSM	ENSMUSG00000002524.18	ENST00000527197.5	1559	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGCCTCATTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75952739	75942177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75942477_75942597_75942834_75943030_75943167_75943314_75943506_75943588_75943803_75944081_75944175_75944255_75944418_75947390_75947481_75947585_75947682_75952698
ENSMUSG00000002546.18_0	chr2	+	4361	26	FSM	ENSMUSG00000002546.18	ENSMUST00000239447.2	4361	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32178264	32197933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32178409_32182104_32182228_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUSG00000002546.18_1	chr2	+	4425	27	FSM	ENSMUSG00000002546.18	ENSMUST00000239474.2	4442	27	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGGGTGTTCGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	32178281	32197933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32178409_32182104_32182228_32183326_32183408_32186637_32186734_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUSG00000002546.18_5	chr2	+	4157	25	FSM	ENSMUSG00000002546.18	ENSMUST00000081670.14	4164	25	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATACTGCTGGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	32178357	32197918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32178409_32182104_32182228_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUSG00000002546.18_7	chr2	+	4092	24	ISM	ENSMUSG00000002546.18	ENSMUST00000081670.14	4164	25	3761	7	3761	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATACTGCTGGGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	32182118	32197918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32182228_32186976_32187021_32187119_32187184_32187532_32187590_32187765_32187847_32188611_32188651_32188897_32188961_32189043_32189138_32189215_32189323_32191696_32191756_32192153_32192296_32192714_32192805_32192907_32193016_32193156_32193245_32193595_32193934_32194153_32194268_32194645_32194892_32194970_32195047_32195221_32195308_32195486_32195706_32195784_32195888_32195988_32196096_32196171_32196329_32196417
ENSMUSG00000002550.17_0	chr2	-	1983	7	FSM	ENSMUSG00000002550.17	ENSMUST00000002625.15	2005	7	7	15	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATAAAACATTAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	32150164	32145028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32146224_32146629_32146679_32148101_32148197_32148288_32148432_32148582_32148680_32149591_32149752_32149920
ENSMUSG00000002580.8_0	chr11	-	733	4	FSM	ENSMUSG00000002580.8	ENSMUST00000002655.8	747	4	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCGTGTGTTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	98329805	98328535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98328972_98329062_98329140_98329472_98329571_98329683
ENSMUSG00000002580.8_2	chr11	-	610	3	FSM	ENSMUSG00000002580.8	ENST00000577810.1	618	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGCAGAAAAGAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	98329779	98328723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98329140_98329472_98329571_98329683
ENSMUSG00000002580.8_3	chr11	-	515	2	ISM	ENSMUSG00000002580.8	ENST00000577810.1	618	3	216	0	216	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGCAGAAAAGAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	98329571	98328723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_98329140_98329472
ENSMUSG00000002602.17_0	chr7	-	4250	20	FSM	ENSMUSG00000002602.17	ENSMUST00000002677.11	4265	20	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTATTCTGTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25488105	25456705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472523_25472551_25472767_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002602.17_11	chr7	-	3890	19	FSM	ENSMUSG00000002602.17	ENSMUST00000085948.11	3899	19	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATACATATGTCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	25488127	25457060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25458439_25460175_25460313_25460829_25460990_25462708_25462819_25463367_25463490_25463846_25463940_25465942_25466021_25466217_25466314_25469642_25469735_25470057_25470191_25472767_25472919_25473508_25473649_25473939_25474151_25477794_25477911_25478048_25478130_25485258_25485436_25486311_25486413_25486715_25486942_25487839
ENSMUSG00000002603.16_0	chr7	+	1068	5	FSM	ENSMUSG00000002603.16	ENST00000677934.1	1081	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGACTGGTGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	25387299	25404494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25387649_25391801_25391963_25393647_25393766_25403549_25403704_25404208
ENSMUSG00000002608.9_0	chr7	-	3012	5	FSM	ENSMUSG00000002608.9	ENSMUST00000002683.3	3032	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCCATCCATTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	25418502	25410539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25412539_25413777_25413908_25414175_25414446_25415159_25415613_25418342
ENSMUSG00000002617.15_0	chr17	-	4084	6	FSM	ENSMUSG00000002617.15	ENSMUST00000037057.14	4103	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATTTTATGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	23412214	23392849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23396339_23397248_23397376_23401121_23401207_23410318_23410410_23410650_23410777_23412048
ENSMUSG00000002625.11_0	chr17	-	2088	14	FSM	ENSMUSG00000002625.11	ENSMUST00000050214.9	2102	14	8	6	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGGTCTTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32569573	32540403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUSG00000002625.11_10	chr17	-	1824	12	ISM	ENSMUSG00000002625.11	ENST00000679638.1	1916	14	11677	3	11677	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGGTCTTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32557798	32540403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764
ENSMUSG00000002625.11_3	chr17	-	1978	15	FSM	ENSMUSG00000002625.11	ENSMUST00000236503.2	1987	15	4	5	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGGTCTTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32569565	32540403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32540760_32540869_32540966_32551452_32551584_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557329_32557430_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUSG00000002625.11_7	chr17	-	1913	14	FSM	ENSMUSG00000002625.11	ENST00000679638.1	1916	14	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGGTCTTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32569475	32540403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297_32564373_32569460
ENSMUSG00000002625.11_9	chr17	-	1886	13	ISM	ENSMUSG00000002625.11	ENST00000679638.1	1916	14	5115	3	5115	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGGTCTTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32564360	32540403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32540760_32540869_32540966_32551452_32551507_32551784_32551891_32551976_32552119_32553561_32553671_32554536_32554598_32554931_32555003_32555080_32555178_32555258_32555713_32557244_32557489_32557764_32557798_32564297
ENSMUSG00000002635.12_0	chr7	-	1289	7	FSM	ENSMUSG00000002635.12	ENSMUST00000002710.10	1295	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTGGTTTATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33896080	33883923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33884237_33885718_33885868_33888773_33888882_33892160_33892532_33895490_33895552_33895696_33895864_33895960
ENSMUSG00000002658.10_0	chr17	-	1701	13	FSM	ENSMUSG00000002658.10	ENSMUST00000002733.7	1717	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1952	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGAGTGTGTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	57318278	57310410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57310632_57310720_57310812_57310914_57311054_57311121_57311196_57311308_57311429_57311510_57311573_57311665_57311820_57312359_57312545_57313985_57314157_57314712_57314907_57316687_57316761_57317975_57318023_57318108
ENSMUSG00000002660.9_0	chr17	+	972	6	FSM	ENSMUSG00000002660.9	ENSMUST00000002735.9	983	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTGAAGCACCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	57297314	57303187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57297514_57297605_57297678_57298293_57298391_57299825_57300014_57300447_57300554_57302877
ENSMUSG00000002661.15_0	chr17	+	698	3	FSM	ENSMUSG00000002661.15	ENSMUST00000074141.14	736	3	18	20	14	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAAAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	57304356	57306291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57304568_57305670_57305796_57305929
ENSMUSG00000002661.15_1	chr17	+	897	4	FSM	ENSMUSG00000002661.15	ENSMUST00000002737.7	917	4	6	14	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAACAAGCAAGCAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57304348	57306308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57304568_57305388_57305563_57305670_57305796_57305929
ENSMUSG00000002679.15_0	chr12	-	1048	8	FSM	ENSMUSG00000002679.15	ENSMUST00000161211.8	1059	8	3	8	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCATGCCTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	81641777	81620338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027_81638188_81641713
ENSMUSG00000002679.15_1	chr12	-	979	7	ISM	ENSMUSG00000002679.15	ENSMUST00000002756.14	1003	8	3550	0	3550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCATGCCTTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	81638182	81620338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_81620735_81621298_81621327_81626343_81626460_81628574_81628684_81629406_81629490_81635756_81635849_81638027
ENSMUSG00000002688.9_0	chr12	-	3491	18	FSM	ENSMUSG00000002688.9	ENST00000331968.11	3507	18	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTGTCATACTAAT	NA	NA	NA	NA	NA	NA	NA	NA	50695746	50388016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_50389004_50389836_50389923_50411294_50411563_50412396_50412496_50413084_50413247_50430182_50430290_50431925_50431999_50433998_50434052_50435035_50435316_50436692_50436771_50438108_50438233_50439617_50439823_50441381_50441460_50441612_50441824_50472221_50472383_50474885_50475018_50536685_50536825_50695498
ENSMUSG00000002718.15_0	chr2	+	3620	25	FSM	ENSMUSG00000002718.15	ENSMUST00000002790.14	3641	25	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAGAATGGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	166747989	166788299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166748098_166757089_166757185_166761532_166761676_166763889_166763992_166764074_166764221_166764673_166764765_166768270_166768379_166769163_166769257_166769362_166769531_166769632_166769763_166770877_166770944_166771704_166771908_166772501_166772587_166774052_166774115_166776672_166776810_166777842_166777947_166779261_166779360_166781554_166781706_166781829_166782039_166783137_166783236_166783326_166783413_166783934_166784017_166784979_166785127_166786296_166786529_166787623
ENSMUSG00000002728.15_0	chr2	+	1127	6	FSM	ENSMUSG00000002728.15	ENSMUST00000110000.8	1142	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACATCTGTAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	145745168	145758338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_145745283_145750510_145750536_145753592_145753684_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002728.15_2	chr2	+	1139	6	FSM	ENSMUSG00000002728.15	ENSMUST00000002805.14	1172	6	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCACATCTGTAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	145745186	145758338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_145745283_145750510_145750536_145753592_145753714_145754312_145754449_145757453_145757600_145757723
ENSMUSG00000002731.7_0	chr2	-	1339	7	FSM	ENSMUSG00000002731.7	ENST00000677689.1	1352	7	7	6	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTAGCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	76478210	76460246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473517_76473649_76478135
ENSMUSG00000002731.7_1	chr2	-	1264	6	ISM	ENSMUSG00000002731.7	ENST00000677689.1	1352	7	4569	6	4569	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTAGCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	76473648	76460246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473517
ENSMUSG00000002731.7_5	chr2	-	1208	6	FSM	ENSMUSG00000002731.7	ENST00000677981.1	1221	6	7	6	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTAGCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	76478210	76460246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76478135
ENSMUSG00000002731.7_6	chr2	-	1134	5	ISM	ENSMUSG00000002731.7	ENST00000677689.1	1352	7	7553	6	7553	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTAGCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	76470664	76460246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584
ENSMUSG00000002731.7_7	chr2	-	1600	8	FSM	ENSMUSG00000002731.7	ENSMUST00000002808.7	1614	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTAGCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	76478350	76460246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76460913_76463876_76464052_76467138_76467234_76469543_76469662_76470584_76470664_76473566_76473649_76477468_76477639_76478135
ENSMUSG00000002732.15_0	chr2	-	839	4	FSM	ENSMUSG00000002732.15	ENSMUST00000002809.14	860	4	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTAAACCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	76503404	76493398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76493697_76496020_76496155_76502040_76502193_76503149
ENSMUSG00000002732.15_2	chr2	-	639	4	FSM	ENSMUSG00000002732.15	ENST00000434643.6	654	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTATAAATATAATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	76503351	76493542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76493697_76496020_76496152_76502040_76502193_76503149
ENSMUSG00000002733.9_0	chr2	+	2518	8	FSM	ENSMUSG00000002733.9	ENSMUST00000111920.2	2534	8	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTATTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	76505639	76527171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76505979_76510506_76510624_76513073_76513230_76516962_76517100_76517625_76517791_76520788_76520833_76522992_76523109_76525727
ENSMUSG00000002741.10_0	chr11	+	2528	7	FSM	ENSMUSG00000002741.10	ENSMUST00000002818.9	2541	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAATACTGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	5905697	5917772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5906005_5909296_5909380_5911187_5911289_5912336_5912442_5912692_5912759_5914560_5914663_5916008
ENSMUSG00000002748.8_0	chr5	+	5987	20	FSM	ENSMUSG00000002748.8	ENST00000339594.9	6011	20	14	10	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAGAGACAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135216131	135274975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959_135273333_135273815
ENSMUSG00000002748.8_3	chr5	+	6477	19	FSM	ENSMUSG00000002748.8	ENSMUST00000002825.6	6492	19	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAGAGACAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	135216124	135274975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135216611_135225325_135225443_135227024_135227170_135233843_135234046_135237896_135238019_135239594_135239793_135245443_135247149_135250811_135250951_135251938_135252073_135255363_135255467_135257380_135257480_135259010_135259189_135260453_135260637_135265128_135265277_135266772_135266921_135268880_135269000_135271265_135271397_135272662_135272767_135272959
ENSMUSG00000002763.17_0	chr17	+	3192	17	FSM	ENSMUSG00000002763.17	ENSMUST00000002840.9	3200	17	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTCTTGTGAGAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	47022395	47036466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47023311_47024833_47024998_47025386_47025471_47031253_47031357_47031437_47031572_47032108_47032221_47032595_47032805_47033169_47033366_47033547_47033625_47034037_47034171_47034249_47034456_47034599_47034662_47034844_47034954_47035316_47035434_47035552_47035631_47035750_47035891_47036113
ENSMUSG00000002767.14_0	chr17	+	1019	7	FSM	ENSMUSG00000002767.14	ENSMUST00000002844.14	1031	7	11	1	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	46957165	46961057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_13	chr17	+	377	2	FSM	ENSMUSG00000002767.14	ENST00000489623.1	397	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAATGTCTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46958334	46961036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46958485_46960809
ENSMUSG00000002767.14_7	chr17	+	981	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113429.8	998	7	17	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTTACTACCTTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	46957192	46961057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46957325_46958315_46958485_46959162_46959305_46959397_46959514_46959595_46959696_46959960_46960035_46960809
ENSMUSG00000002767.14_9	chr17	+	970	7	FSM	ENSMUSG00000002767.14	ENSMUST00000113430.2	991	7	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTACTACCTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	46957209	46961058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46957325_46958321_46958485_46959162_46959305_46959397_46959514_46959584_46959696_46959960_46960035_46960809
ENSMUSG00000002768.9_0	chr17	+	1025	4	FSM	ENSMUSG00000002768.9	ENST00000642748.1	1035	4	8	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTGTTTCTGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	46991704	46994073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46991917_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_1	chr17	+	925	4	FSM	ENSMUSG00000002768.9	ENSMUST00000233430.2	945	4	11	9	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGCCAGAAGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	46991922	46994019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46992089_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002768.9_3	chr17	+	841	4	FSM	ENSMUSG00000002768.9	ENSMUST00000002845.8	859	4	8	10	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCACACCGCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46992057	46994027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46992132_46992542_46992824_46992934_46993038_46993644
ENSMUSG00000002778.15_0	chr7	+	1589	5	FSM	ENSMUSG00000002778.15	ENSMUST00000002855.14	1599	5	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTCCCTGCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	45522205	45533156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45531177_45532400
ENSMUSG00000002778.15_2	chr7	+	1350	5	FSM	ENSMUSG00000002778.15	ENSMUST00000211716.2	1350	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGCTGTTCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45522248	45533153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45522526_45523182_45523284_45523466_45523626_45530923_45530984_45532400
ENSMUSG00000002781.20_0	chr7	+	2288	8	FSM	ENSMUSG00000002781.20	ENSMUST00000069772.16	2297	8	4	5	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGGAGTAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45546368	45566832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45546526_45546858_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUSG00000002781.20_1	chr7	+	2443	7	FSM	ENSMUSG00000002781.20	ENSMUST00000209350.2	2466	7	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTAATAACTCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45546540	45566826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45547091_45549055_45549161_45556341_45556537_45557530_45557662_45558745_45559026_45565506_45565697_45565834
ENSMUSG00000002797.10_0	chr6	-	3950	4	FSM	ENSMUSG00000002797.10	ENSMUST00000131475.2	3960	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACGAAGAAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	54969928	54959567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54962987_54963817_54963954_54966396_54966543_54969679
ENSMUSG00000002797.10_4	chr6	-	354	3	FSM	ENSMUSG00000002797.10	ENST00000514941.1	377	3	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGGAGAGTCAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	54969780	54962869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54962987_54963817_54963954_54969679
ENSMUSG00000002799.7_0	chr12	-	5073	26	FSM	ENSMUSG00000002799.7	ENST00000331782.8	5080	26	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTGCAGTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	112893430	112871400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112871924_112872032_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ENSMUSG00000002799.7_1	chr12	-	5002	25	FSM	ENSMUSG00000002799.7	ENST00000347004.2	5014	25	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTGCAGTTGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	112893473	112871400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112871924_112872032_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876267_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ENSMUSG00000002799.7_21	chr12	-	5077	26	FSM	ENSMUSG00000002799.7	ENSMUST00000075827.5	5106	26	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTTAAACGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	112893378	112871449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112873006_112873172_112873330_112874063_112874196_112874678_112874928_112875322_112875439_112875528_112875643_112876148_112876235_112876312_112876341_112876784_112876902_112877009_112877124_112877235_112877350_112877555_112877670_112877745_112877899_112877976_112878128_112878817_112878992_112879090_112879138_112879224_112879339_112879499_112879614_112879953_112880068_112880223_112880344_112880428_112880560_112883691_112883753_112883850_112884103_112885619_112885678_112892501_112892853_112893038
ENSMUSG00000002803.15_0	chr12	+	1973	5	FSM	ENSMUSG00000002803.15	ENSMUST00000165079.8	1975	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAACAAGAACCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	112940101	112942548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112940133_112940295_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUSG00000002803.15_1	chr12	+	2048	4	FSM	ENSMUSG00000002803.15	ENSMUST00000002880.7	2057	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAACAAGAACCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	112940189	112942548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112940603_112940678_112940770_112940872_112940992_112941123
ENSMUSG00000002804.5_0	chr12	-	1225	5	FSM	ENSMUSG00000002804.5	ENSMUST00000221397.2	1241	5	10	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTCTCATGCGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	112905734	112897916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112898671_112901975_112902214_112902414_112902480_112902898_112902943_112905610
ENSMUSG00000002804.5_1	chr12	-	719	5	FSM	ENSMUSG00000002804.5	ENSMUST00000002881.5	734	5	13	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAATAAAGCTTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112905724	112898376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112898671_112901975_112902178_112902414_112902480_112902898_112902943_112905610
ENSMUSG00000002808.8_0	chr13	-	2350	3	FSM	ENSMUSG00000002808.8	ENSMUST00000002885.8	2363	3	10	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGAGCCTATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	19803964	19775878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_19777519_19778616_19778826_19803463
ENSMUSG00000002812.5_0	chr11	-	4036	30	FSM	ENSMUSG00000002812.5	ENSMUST00000002889.5	4060	30	12	12	12	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTAAAAAATCAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	60618077	60604980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60605274_60605414_60605481_60605856_60605963_60606109_60606217_60606286_60606416_60606491_60606553_60606628_60606784_60606917_60607159_60607230_60607371_60607480_60607670_60607962_60608155_60608234_60608340_60608945_60609118_60609407_60609492_60609671_60609747_60609850_60609934_60610518_60610699_60610831_60611045_60611186_60611324_60611463_60611612_60611903_60611989_60612272_60612431_60612507_60612684_60613120_60613225_60613410_60613573_60613825_60613912_60614190_60614272_60615616_60615689_60615983_60616095_60617952
ENSMUSG00000002814.16_1	chr11	-	3726	19	FSM	ENSMUSG00000002814.16	ENSMUST00000002891.11	3741	19	8	7	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATATTTTCTGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	60668183	60630890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60631528_60633261_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUSG00000002814.16_9	chr11	-	3525	18	FSM	ENSMUSG00000002814.16	ENSMUST00000102668.10	3542	18	12	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCAAAGCTAAGTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	60668079	60632721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60633951_60634758_60634882_60636642_60636787_60638691_60638858_60638937_60639052_60639991_60640122_60640229_60640416_60641401_60641610_60643108_60643192_60644712_60644788_60646769_60646871_60647103_60647275_60647430_60647575_60650122_60650232_60652557_60652634_60653293_60653368_60654191_60654252_60667747
ENSMUSG00000002820.7_0	chr9	+	5937	10	FSM	ENSMUSG00000002820.7	ENSMUST00000065005.5	5951	10	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGAGCAGGTCCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	21176594	21189060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21177014_21178034_21178119_21178202_21178377_21179546_21179824_21179900_21179966_21182015_21182147_21183763_21183843_21183931_21184009_21184086_21184207_21184549
ENSMUSG00000002825.9_0	chr9	+	1307	10	FSM	ENSMUSG00000002825.9	ENSMUST00000002902.8	1316	10	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAAGCTCTTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	21323140	21331569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21323394_21323528_21323598_21323688_21323828_21328360_21328440_21328567_21328684_21329579_21329719_21330586_21330663_21330734_21330845_21330920_21331009_21331331
ENSMUSG00000002831.15_1	chr17	-	6343	8	FSM	ENSMUSG00000002831.15	ENSMUST00000238734.2	6350	8	2	5	1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAAAATTCTTTATAGC	NA	NA	NA	NA	NA	NA	NA	NA	56416801	56407595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56409331_56409408_56409496_56410109_56410298_56410416_56414375_56415587_56415647_56416312_56416452_56416537_56416606_56416692
ENSMUSG00000002833.12_1	chr17	+	2262	16	FSM	ENSMUSG00000002833.12	ENSMUST00000226053.2	2270	16	8	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56386641	56407592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002833.12_16	chr17	+	2227	16	FSM	ENSMUSG00000002833.12	ENSMUST00000225843.2	2238	16	5	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56386703	56407592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403820_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407344
ENSMUSG00000002833.12_21	chr17	+	1770	14	FSM	ENSMUSG00000002833.12	ENST00000621835.4	1784	14	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGATGAGCCCAGCACCG	NA	NA	NA	NA	NA	NA	NA	NA	56386731	56406367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403847_56404017_56404087_56404157_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176
ENSMUSG00000002833.12_9	chr17	+	2254	16	FSM	ENSMUSG00000002833.12	ENSMUST00000002911.10	2264	16	6	4	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAAAGAAACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56386643	56407592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56386827_56389099_56389177_56389276_56389416_56400521_56400723_56403016_56403131_56403204_56403277_56403850_56404017_56404087_56404164_56404234_56404527_56404881_56404986_56405483_56405558_56405682_56405754_56405973_56406076_56406176_56406388_56406858_56406986_56407347
ENSMUSG00000002835.10_1	chr17	+	5523	14	FSM	ENSMUSG00000002835.10	ENSMUST00000002914.10	5535	14	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAACGAAAAGAAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	56347443	56377269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56347552_56351061_56351113_56353822_56354635_56363420_56363478_56364717_56364921_56365983_56366066_56366257_56366327_56369084_56369312_56369550_56369720_56369810_56369892_56370327_56370421_56371000_56371257_56371973_56372426_56374406
ENSMUSG00000002844.10_13	chr16	-	2951	4	FSM	ENSMUSG00000002844.10	ENSMUST00000002923.10	2966	4	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCCTGGCTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	38273053	38264394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38266467_38267609_38267971_38270490_38270846_38272890
ENSMUSG00000002845.15_0	chr16	+	2646	9	FSM	ENSMUSG00000002845.15	ENSMUST00000171687.8	2667	9	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTCCTATTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	38383191	38412521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405741_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002845.15_2	chr16	+	2857	9	FSM	ENSMUSG00000002845.15	ENSMUST00000002924.15	2871	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTCCTATTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	38383184	38412521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38383493_38384476_38384664_38393415_38393639_38396104_38396189_38402331_38402487_38405537_38405881_38406582_38406771_38408544_38408666_38411273
ENSMUSG00000002846.10_0	chr16	-	1549	7	FSM	ENSMUSG00000002846.10	ENSMUST00000002925.6	1573	7	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTTAAATTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38343013	38318720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38319446_38322923_38323035_38325773_38325853_38329200_38329269_38331080_38331170_38338728_38338895_38342702
ENSMUSG00000002847.8_0	chr16	-	1954	11	FSM	ENSMUSG00000002847.8	ENSMUST00000002926.8	1974	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGAATCATTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	38253497	38216488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38216898_38217700_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235679_38235858_38237421_38237624_38253165
ENSMUSG00000002847.8_4	chr16	-	1156	9	FSM	ENSMUSG00000002847.8	ENST00000495992.5	1168	9	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACAGGTGAGTCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	38237622	38217708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38217866_38221237_38221347_38225898_38225989_38227953_38228122_38229956_38230047_38232447_38232550_38235130_38235240_38235727_38235858_38237421
ENSMUSG00000002870.9_0	chr6	-	3356	16	FSM	ENSMUSG00000002870.9	ENSMUST00000058011.8	3371	16	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTATCCCTTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88875754	88860462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865995_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002870.9_1	chr6	-	3361	16	NNC	ENSMUSG00000002870.9	novel	3371	16	NA	NA	7	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGCTATCCCTTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	88875755	88860462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_-_88861093_88861357_88861514_88861663_88861847_88862825_88863078_88863942_88864056_88864482_88864610_88864701_88864953_88865153_88865248_88865991_88866188_88866769_88866905_88868654_88868863_88868957_88869178_88869926_88870188_88870319_88870496_88874268_88874499_88875626
ENSMUSG00000002871.15_1	chr6	+	1788	12	FSM	ENSMUSG00000002871.15	ENSMUST00000055022.15	1820	12	13	19	13	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88879245	88889194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88879513_88882930_88883061_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ENSMUSG00000002871.15_3	chr6	+	1685	12	FSM	ENSMUSG00000002871.15	ENSMUST00000203185.3	1718	12	14	19	14	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATAAAAAGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88882941	88889194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88883061_88883519_88883695_88884922_88885055_88885165_88885299_88886271_88886359_88886489_88886563_88886662_88886743_88887132_88887244_88887322_88887384_88887529_88887633_88887778_88887860_88888664
ENSMUSG00000002881.15_0	chr1	-	3860	8	FSM	ENSMUSG00000002881.15	ENSMUST00000069792.14	3874	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCTTGCTTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52539829	52496457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52498466_52501246_52501364_52503943_52504107_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539368
ENSMUSG00000002881.15_1	chr1	-	3623	9	FSM	ENSMUSG00000002881.15	ENSMUST00000186764.7	3640	9	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCCTTGCTTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52539447	52496457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52498466_52501246_52501364_52503943_52504104_52506048_52506139_52518396_52518449_52520029_52520164_52529079_52529915_52539008_52539157_52539368
ENSMUSG00000002885.15_0	chr8	-	2968	18	FSM	ENSMUSG00000002885.15	ENSMUST00000002964.14	2986	18	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACTAAAGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	84467942	84449884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002885.15_1	chr8	-	2967	18	FSM	ENSMUSG00000002885.15	ENSMUST00000166939.8	2980	18	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACTAAAGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	84467947	84449884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84460042_84460196_84460637_84460755_84460930_84460982_84467735
ENSMUSG00000002885.15_4	chr8	-	2985	20	FSM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	1	14	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATAAAAAAGATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84467797	84450004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002885.15_5	chr8	-	2851	19	FSM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	2	14	2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGATAAAAAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	84467800	84450006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924_84460982_84467735
ENSMUSG00000002885.15_6	chr8	-	2781	18	ISM	ENSMUSG00000002885.15	ENSMUST00000109802.3	2867	19	6826	14	6822	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGATAAAAAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	84460976	84450006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84460042_84460196_84460637_84460755_84460924
ENSMUSG00000002885.15_7	chr8	-	2918	19	ISM	ENSMUSG00000002885.15	ENSMUST00000075843.13	3000	20	6822	14	6822	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATAAAAAAGATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84460976	84450004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84450532_84450607_84450707_84450820_84450990_84451066_84451159_84451246_84451317_84451397_84451628_84451783_84451976_84452493_84452659_84454373_84454598_84454723_84454841_84454909_84455070_84455685_84455764_84455885_84455933_84456010_84456155_84456739_84456887_84458531_84458667_84460042_84460196_84460637_84460755_84460924
ENSMUSG00000002897.6_0	chr6	+	7732	13	FSM	ENSMUSG00000002897.6	ENSMUST00000002976.5	7752	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATTTATTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	120440220	120464513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455124_120455137_120455335_120455444_120456963_120457006_120457943
ENSMUSG00000002897.6_1	chr6	+	7697	12	NIC	ENSMUSG00000002897.6	novel	7752	13	NA	NA	36	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTATTTATTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	120440243	120464513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_120440428_120449052_120449078_120449886_120450034_120450714_120450828_120451250_120451378_120452189_120452238_120452416_120452581_120453850_120453935_120454356_120454442_120455335_120455444_120456963_120457006_120457943
ENSMUSG00000002900.18_0	chr12	+	5772	33	FSM	ENSMUSG00000002900.18	ENSMUST00000239496.2	5778	33	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACATCCTATGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31315296	31379636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_31315601_31316689_31316866_31319055_31319192_31322428_31322503_31328460_31328650_31328734_31328799_31332555_31332759_31335624_31335746_31337414_31337604_31337877_31338058_31338201_31338315_31339340_31339421_31347624_31347761_31348811_31348971_31349922_31350051_31350205_31350330_31351004_31351210_31352560_31352705_31352902_31353135_31354588_31354753_31355765_31355991_31356973_31357189_31357948_31358046_31368262_31368633_31369917_31370103_31370896_31371139_31373460_31373665_31374174_31374320_31376168_31376377_31376566_31376709_31377643_31377821_31379108_31379269_31379355
ENSMUSG00000002910.12_3	chr8	-	711	5	FSM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGTGAGCTTAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	71291672	71289506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71289665_71289753_71290011_71290087_71290182_71291333_71291486_71291622
ENSMUSG00000002910.12_4	chr8	-	655	4	ISM	ENSMUSG00000002910.12	ENST00000379656.7	716	5	193	5	193	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGTGAGCTTAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	71291479	71289506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_71289665_71289753_71290011_71290087_71290182_71291333
ENSMUSG00000002910.12_5	chr8	-	996	6	FSM	ENSMUSG00000002910.12	ENST00000222250.5	1011	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGTGAGCTTAGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	71292039	71289506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71289665_71289753_71290011_71290087_71290182_71291333_71291486_71291622_71291690_71291771
ENSMUSG00000002944.16_0	chr5	-	3373	15	FSM	ENSMUSG00000002944.16	ENSMUST00000170051.8	3399	15	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAGATTTAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	18054776	17986699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_17988348_17990719_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019110_18019291_18019670_18019819_18025437_18025599_18033772_18033983_18034453_18034548_18054654
ENSMUSG00000002944.16_10	chr5	-	1213	11	FSM	ENSMUSG00000002944.16	ENST00000544133.5	1238	11	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTAAGTGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	18033881	17990726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18003226_18003297_18016178_18016226_18018010_18018103_18019110_18019291_18019670_18019819_18025437_18025599_18033772
ENSMUSG00000002944.16_11	chr5	-	1292	10	FSM	ENSMUSG00000002944.16	ENST00000433696.6	1309	10	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTAAGTGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	18033889	17990726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18018010_18018103_18019110_18019291_18019670_18019819_18025437_18025599_18033772
ENSMUSG00000002944.16_12	chr5	-	1222	11	FSM	ENSMUSG00000002944.16	ENST00000538969.5	1246	11	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAGTAAGTGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	18033882	17990726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019670_18019819_18025437_18025599_18033772
ENSMUSG00000002944.16_6	chr5	-	2667	16	FSM	ENSMUSG00000002944.16	ENSMUST00000169095.6	2677	16	2	8	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAACCTTTTTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	18093743	17987372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_17988348_17990719_17990885_17992683_17992739_17993249_17993324_18000576_18000696_18001993_18002182_18003226_18003297_18016178_18016226_18018010_18018103_18019110_18019291_18019670_18019819_18025437_18025599_18033772_18033983_18034453_18034548_18040615_18040670_18093708
ENSMUSG00000002948.20_0	chr8	+	1624	13	FSM	ENSMUSG00000002948.20	ENSMUST00000003027.14	1626	13	1	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4288829	4297896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4297656
ENSMUSG00000002949.16_0	chr8	-	1708	12	ISM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	1683	9	1683	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	4324230	4309739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136
ENSMUSG00000002949.16_1	chr8	-	1778	13	FSM	ENSMUSG00000002949.16	ENSMUST00000003029.14	1790	13	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCAGTTTGAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	4325910	4309739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_4310256_4310511_4310623_4311907_4311998_4315225_4315277_4316555_4316681_4316769_4316863_4317254_4317341_4317636_4317777_4317863_4318014_4318299_4318381_4319854_4320026_4324136_4324233_4325842
ENSMUSG00000002957.12_0	chr7	+	4626	22	FSM	ENSMUSG00000002957.12	ENSMUST00000003038.12	4646	22	11	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGGAACATGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	141142096	141212915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191248_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000002957.12_3	chr7	+	3256	22	FSM	ENSMUSG00000002957.12	ENST00000332231.9	3270	22	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTTGAACGAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	141142107	141211553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141142340_141168198_141168268_141177385_141177529_141178614_141178809_141182145_141182276_141184821_141184924_141189719_141189829_141191245_141191397_141192541_141192711_141194111_141194250_141199363_141199547_141200384_141200483_141200704_141200937_141201027_141201202_141203530_141203695_141206020_141206104_141207806_141207897_141209102_141209227_141209971_141210089_141210197_141210268_141210349_141210485_141211204
ENSMUSG00000002963.18_0	chr7	+	1744	17	FSM	ENSMUSG00000002963.18	ENSMUST00000107876.8	1770	17	20	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCACAGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	44506582	44512068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44506727_44506818_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_12	chr7	+	1447	15	FSM	ENSMUSG00000002963.18	ENST00000600573.5	1464	15	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTCAATAAACACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44506855	44512045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_15	chr7	+	1431	15	FSM	ENSMUSG00000002963.18	ENST00000600910.5	1447	15	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTCAATAAACACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44506854	44512045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_2	chr7	+	2173	16	FSM	ENSMUSG00000002963.18	ENSMUST00000003044.14	2184	16	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAGACTTAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44506589	44512412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509500_44509609_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002963.18_9	chr7	+	1532	15	FSM	ENSMUSG00000002963.18	ENSMUST00000098478.7	1550	15	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCACAGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	44506778	44512068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44506979_44507586_44507634_44507876_44508174_44509146_44509227_44509311_44509370_44509783_44509856_44510286_44510336_44510412_44510484_44510570_44510664_44510741_44510839_44510923_44510986_44511072_44511183_44511617_44511706_44511789_44511852_44511922
ENSMUSG00000002968.10_0	chr7	-	3673	18	FSM	ENSMUSG00000002968.10	ENSMUST00000208253.2	3693	18	14	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATCTTTCTGGCCGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44541801	44526194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44527715_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUSG00000002968.10_16	chr7	-	1597	13	FSM	ENSMUSG00000002968.10	ENST00000538643.5	1619	13	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCCAATAAAGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	44541778	44528836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530342_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44541522_44541569_44541654
ENSMUSG00000002968.10_2	chr7	-	2604	18	FSM	ENSMUSG00000002968.10	ENSMUST00000003049.8	2619	18	8	7	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	44542128	44528814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530346_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUSG00000002968.10_4	chr7	-	2263	18	FSM	ENSMUSG00000002968.10	ENST00000312865.10	2278	18	11	4	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATGCCCGGCTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	44541783	44528814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44528939_44529350_44529529_44529675_44529895_44529990_44530063_44530342_44530536_44532182_44532291_44532391_44532450_44532522_44532609_44533542_44533672_44533986_44534181_44534256_44534345_44534503_44534635_44534762_44534926_44535207_44535329_44535595_44535695_44541206_44541332_44541522_44541569_44541654
ENSMUSG00000002980.15_0	chr7	-	2414	15	FSM	ENSMUSG00000002980.15	ENSMUST00000003061.14	2429	15	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCCTACCGCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	19504463	19490061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19490545_19490632_19490751_19492348_19492494_19492583_19492729_19492884_19493022_19493971_19494114_19494218_19494338_19497964_19498122_19498577_19498715_19499258_19499442_19499537_19499635_19500613_19500685_19500760_19500987_19502376_19502499_19504331
ENSMUSG00000002981.11_0	chr7	-	4129	14	FSM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTACTGTCCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	19398950	19365501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642_19389756_19398858
ENSMUSG00000002981.11_1	chr7	-	4040	13	ISM	ENSMUSG00000002981.11	ENSMUST00000055242.11	4143	14	9200	6	9200	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGTACTGTCCCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	19389758	19365501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_19367888_19367980_19368149_19368802_19368939_19369232_19369329_19369585_19369777_19371002_19371097_19371393_19371639_19372041_19372163_19372856_19372943_19376976_19377095_19379766_19379926_19380640_19380765_19389642
ENSMUSG00000002983.18_0	chr7	-	2178	11	FSM	ENSMUSG00000002983.18	ENSMUST00000049912.15	2200	11	16	6	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTGGGGGTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	19363347	19340147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19340867_19345547_19345626_19345741_19345811_19346429_19346646_19347705_19347811_19349483_19349616_19350270_19350363_19351686_19351845_19353438_19353768_19361847_19361896_19363115
ENSMUSG00000002984.18_0	chr7	-	1594	9	FSM	ENSMUSG00000002984.18	ENSMUST00000032555.10	1646	9	48	4	48	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGTGGAAAAAAAAATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	19449302	19435257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905
ENSMUSG00000002984.18_1	chr7	-	1559	10	FSM	ENSMUSG00000002984.18	ENSMUST00000093552.12	1577	10	4	14	4	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATAGGATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	19449359	19435251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19435783_19436772_19436876_19436990_19437068_19437193_19437317_19444657_19444764_19444842_19444945_19447593_19447687_19448217_19448286_19448905_19449185_19449282
ENSMUSG00000002985.17_0	chr7	-	1391	4	FSM	ENSMUSG00000002985.17	ENSMUST00000174064.9	1408	4	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGAACAAGTGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	19433111	19430048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19431029_19431403_19431573_19432112_19432179_19432935
ENSMUSG00000002985.17_2	chr7	-	1124	4	FSM	ENSMUSG00000002985.17	ENSMUST00000003066.16	1128	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACATTCTGAGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	19432977	19430200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19431029_19431403_19431573_19432112_19432198_19432935
ENSMUSG00000002985.17_3	chr7	-	1072	3	FSM	ENSMUSG00000002985.17	ENSMUST00000173739.8	1221	3	140	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGAGCACATTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	19432192	19430205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19431029_19431403_19431573_19432112
ENSMUSG00000002996.18_0	chr12	-	3125	11	FSM	ENSMUSG00000002996.18	ENSMUST00000172314.9	3142	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGTAAAGAAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	32000526	31976261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31977507_31978582_31978725_31980680_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ENSMUSG00000002996.18_4	chr12	-	2728	9	FSM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGACAAAGCGCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32000222	31979386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827_31994012_32000194
ENSMUSG00000002996.18_5	chr12	-	2686	8	ISM	ENSMUSG00000002996.18	ENSMUST00000167458.9	2733	9	6223	7	5608	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAAGACAAAGCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31993999	31979388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_31981005_31983355_31983501_31984283_31984441_31986970_31987084_31987168_31987281_31987616_31987759_31990276_31990506_31993827
ENSMUSG00000002997.16_0	chr12	-	3358	11	FSM	ENSMUSG00000002997.16	ENSMUST00000036497.16	3378	11	12	8	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAACGTTCCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	32111283	32008482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUSG00000002997.16_1	chr12	-	1644	12	FSM	ENSMUSG00000002997.16	ENSMUST00000003079.12	1657	12	5	8	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAACGTTCCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	32111229	32008482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_32008721_32010380_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110780
ENSMUSG00000002997.16_2	chr12	-	3103	11	FSM	ENSMUSG00000002997.16	ENSMUST00000146865.2	3133	11	25	5	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATAAACGTTCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32110563	32008483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_32010522_32012997_32013137_32013896_32013963_32015113_32015189_32017211_32017314_32022048_32022203_32025917_32026025_32037878_32037963_32043729_32043783_32088620_32088657_32110314
ENSMUSG00000003031.15_0	chr6	+	4546	2	FSM	ENSMUSG00000003031.15	ENSMUST00000067327.11	4552	2	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATTTATTGAGTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	134897364	134902471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134898358_134898918
ENSMUSG00000003031.15_1	chr6	+	2386	3	FSM	ENSMUSG00000003031.15	ENSMUST00000003115.9	2393	3	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATTTATTGAGTGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	134897365	134902471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134898358_134898918_134899047_134901205
ENSMUSG00000003031.15_2	chr6	+	879	2	FSM	ENSMUSG00000003031.15	ENST00000396340.1	901	2	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTAGTGTCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134897882	134901636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134898358_134901232
ENSMUSG00000003032.9_0	chr4	-	3012	5	FSM	ENSMUSG00000003032.9	ENSMUST00000107619.3	3029	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAACGACAATCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55532456	55527149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_55528301_55529717_55529883_55529998_55530984_55531629_55531751_55531866
ENSMUSG00000003033.16_0	chr8	+	2070	12	FSM	ENSMUSG00000003033.16	ENSMUST00000003117.15	2084	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGCCTGTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72993869	73011223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_10	chr8	+	1189	10	FSM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCTCTGCCACCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	72993912	73010600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72994098_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003033.16_11	chr8	+	1173	9	ISM	ENSMUSG00000003033.16	ENST00000590756.5	1205	10	4	580	4	-580	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTGCCTGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	72993906	73010026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_72994098_73003592_73003724_73004524_73004673_73005586_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950
ENSMUSG00000003033.16_23	chr8	+	1373	12	FSM	ENSMUSG00000003033.16	ENST00000444449.6	1390	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCTCTGCCACCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	72993977	73010600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72994088_73000482_73000640_73002956_73003025_73003592_73003724_73004524_73004673_73005552_73005714_73006678_73006822_73007052_73007125_73007318_73007478_73009540_73009667_73009950_73010027_73010578
ENSMUSG00000003037.17_0	chr8	+	4537	8	FSM	ENSMUSG00000003037.17	ENSMUST00000003121.9	4550	8	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACCCTGCAGTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	72915053	72937745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931463_72931515_72933888
ENSMUSG00000003037.17_5	chr8	+	652	8	FSM	ENSMUSG00000003037.17	ENST00000586682.1	663	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGGCCAGCCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	72915208	72934035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72915327_72922270_72922332_72925083_72925145_72928369_72928448_72929683_72929774_72930166_72930233_72931483_72931515_72933888
ENSMUSG00000003038.16_0	chr4	-	1252	6	FSM	ENSMUSG00000003038.16	ENSMUST00000102553.11	1265	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	133695302	133692051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133692885_133693261_133693358_133693739_133693791_133694076_133694107_133694267_133694313_133695105
ENSMUSG00000003039.10_0	chr8	+	2542	4	FSM	ENSMUSG00000003039.10	ENSMUST00000003123.10	2564	4	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAATACTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	72973584	72978251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72973705_72973784_72973927_72975771_72975826_72976025
ENSMUSG00000003062.14_0	chr13	-	1312	9	FSM	ENSMUSG00000003062.14	ENSMUST00000039694.13	1327	9	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAATGATGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19579960	19541855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579873
ENSMUSG00000003062.14_1	chr13	-	1381	10	FSM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAATGATGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19579904	19541855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142_19575268_19579873
ENSMUSG00000003062.14_12	chr13	-	1127	7	FSM	ENSMUSG00000003062.14	ENST00000434197.5	1146	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGTTTTAAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	19560816	19541884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19556757_19556836_19557305_19557384_19560548
ENSMUSG00000003062.14_2	chr13	-	1204	8	ISM	ENSMUSG00000003062.14	ENST00000396013.5	1251	9	18511	0	-2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATAAATCCAACGTA	NA	NA	NA	NA	NA	NA	NA	NA	19560829	19541874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548
ENSMUSG00000003062.14_3	chr13	-	1341	9	ISM	ENSMUSG00000003062.14	ENSMUST00000197565.3	1391	10	4646	10	4082	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAATGATGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19575258	19541855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19575142
ENSMUSG00000003062.14_7	chr13	-	1245	9	FSM	ENSMUSG00000003062.14	ENST00000396013.5	1251	9	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTAAAATAATAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	19579340	19541880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_19542300_19543147_19543222_19551913_19552010_19554419_19554538_19554649_19554704_19556757_19556836_19557305_19557384_19560548_19560832_19579295
ENSMUSG00000003068.18_0	chr10	+	2551	10	FSM	ENSMUSG00000003068.18	ENSMUST00000003152.14	2566	10	10	5	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCACCTGGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	79951646	79966511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79952742_79960635_79960720_79961312_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ENSMUSG00000003068.18_15	chr10	+	1461	8	FSM	ENSMUSG00000003068.18	ENSMUST00000105370.8	1474	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGAAGCTGCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	79961216	79966504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79961403_79961866_79962000_79962066_79962204_79962487_79962616_79962878_79962937_79963737_79963935_79965738_79965946_79966089
ENSMUSG00000003070.7_0	chr10	+	2112	4	FSM	ENSMUSG00000003070.7	ENSMUST00000003154.7	2131	4	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGTTAAGCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	80015322	80025832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80015725_80022585_80022900_80024275_80024342_80024502
ENSMUSG00000003072.16_0	chr10	+	1391	5	FSM	ENSMUSG00000003072.16	ENSMUST00000105367.8	1410	5	10	9	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACCAACTGAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79977300	79981638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79977501_79977874_79978441_79979665_79979820_79981052_79981142_79981256
ENSMUSG00000003072.16_11	chr10	+	913	4	FSM	ENSMUSG00000003072.16	ENSMUST00000003156.15	931	4	11	7	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAGTGTTCTGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	79978159	79981645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79978441_79979665_79979820_79981052_79981142_79981256
ENSMUSG00000003072.16_18	chr10	+	765	3	FSM	ENSMUSG00000003072.16	ENSMUST00000105366.2	781	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACCAACTGAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	79978211	79981638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79978441_79979665_79979820_79981256
ENSMUSG00000003099.12_0	chr7	-	2055	13	FSM	ENSMUSG00000003099.12	ENSMUST00000003183.12	2072	13	9	8	9	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAAACCCACCTCGACG	NA	NA	NA	NA	NA	NA	NA	NA	16761832	16738572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16742917_16742984_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUSG00000003099.12_4	chr7	-	1865	12	FSM	ENSMUSG00000003099.12	ENST00000391919.1	1878	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAAACCTCATCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	16761720	16738584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16739097_16739185_16739268_16739984_16740164_16740256_16740298_16740831_16740920_16741028_16741172_16741650_16741757_16742538_16742638_16743799_16743922_16749322_16749471_16756339_16756582_16761617
ENSMUSG00000003119.15_0	chr11	+	5904	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107539.8	5912	14	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTAAAAAAAGAAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	98093892	98142390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140535
ENSMUSG00000003119.15_1	chr11	+	5137	14	FSM	ENSMUSG00000003119.15	ENSMUST00000107538.2	5143	14	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTTGACAAAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98094166	98141870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98095237_98101186_98102063_98109899_98110077_98111839_98111980_98113453_98113625_98115267_98115458_98120938_98120996_98121809_98121912_98127530_98127609_98131604_98131722_98132523_98132656_98134186_98134399_98136042_98136496_98140508
ENSMUSG00000003123.16_0	chr7	-	3599	10	FSM	ENSMUSG00000003123.16	ENSMUST00000003207.11	3613	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCAAGCTCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25095797	25078958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542_25088079_25094925
ENSMUSG00000003123.16_2	chr7	-	3151	9	FSM	ENSMUSG00000003123.16	ENSMUST00000206861.2	3171	9	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTTAACTAGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	25088639	25079095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25079599_25079950_25080382_25082575_25082753_25082877_25083106_25083797_25084090_25084204_25084391_25084604_25084751_25084861_25084953_25087542
ENSMUSG00000003123.16_3	chr7	-	1251	1	FSM	ENSMUSG00000003123.16	ENSMUST00000105177.3	1251	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTCTGTCGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25098134	25096883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25096900_25098100
ENSMUSG00000003131.8_3	chr9	-	6854	6	FSM	ENSMUSG00000003131.8	ENSMUST00000172450.3	6873	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGTATTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	45896337	45874163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45880265_45884239_45884363_45886378_45886496_45887338_45887429_45889939_45890028_45896002
ENSMUSG00000003131.8_7	chr9	-	411	4	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	6672	4258	7	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAATCTTTTTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45890020	45884239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_45884363_45886378_45886496_45887338_45887429_45889939
ENSMUSG00000003131.8_8	chr9	-	333	3	ISM	ENSMUSG00000003131.8	ENSMUST00000214179.2	794	6	9261	4258	2596	-4258	internal_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTAATCTTTTTAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	45887431	45884239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_45884363_45886378_45886496_45887338
ENSMUSG00000003134.11_0	chr1	-	4414	20	FSM	ENSMUSG00000003134.11	ENSMUST00000054462.11	4451	20	30	7	-25	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATGTTTCACGTATT	NA	NA	NA	NA	NA	NA	NA	NA	39517806	39410579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39411868_39412807_39412906_39413162_39413253_39415504_39415571_39415958_39416200_39418535_39418605_39419075_39419175_39419308_39419439_39420357_39420644_39424201_39424320_39425078_39425294_39428388_39428540_39430197_39430369_39431137_39431336_39433145_39433354_39441763_39442005_39444371_39444601_39445832_39445952_39465148_39465260_39517520
ENSMUSG00000003135.16_0	chr1	+	3466	8	FSM	ENSMUSG00000003135.16	ENSMUST00000161515.8	3482	8	0	16	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAGGAAAAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	39574072	39585954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39574129_39574634_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ENSMUSG00000003135.16_1	chr1	+	3148	7	FSM	ENSMUSG00000003135.16	ENSMUST00000003219.14	3162	7	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAATTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	39574882	39585940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39575419_39576496_39576662_39577351_39577505_39578953_39579157_39581480_39581684_39583972_39584070_39584149
ENSMUSG00000003153.11_0	chr6	-	2978	10	FSM	ENSMUSG00000003153.11	ENST00000543909.5	2987	10	9	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAAGTCCCTGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	122774832	122705526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122716791_122716953_122717346_122717440_122774684
ENSMUSG00000003153.11_4	chr6	-	1506	9	FSM	ENSMUSG00000003153.11	ENST00000535295.5	1511	9	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACTCAGCTGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	122774839	122706768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122707100_122708351_122708556_122709329_122709432_122709728_122709834_122712381_122712570_122713537_122713701_122714016_122714258_122717346_122717440_122774760
ENSMUSG00000003154.16_0	chr6	+	5241	11	FSM	ENSMUSG00000003154.16	ENSMUST00000003238.14	5283	11	17	25	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	122796889	122822300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ENSMUSG00000003154.16_2	chr6	+	4620	12	FSM	ENSMUSG00000003154.16	ENSMUST00000177927.4	4620	12	0	0	0	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	122797469	122822300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122797621_122797661_122797930_122805115_122805463_122808394_122808470_122809896_122809966_122810119_122810261_122810639_122810836_122814779_122815164_122815542_122815645_122816419_122816630_122817184_122817284_122819722
ENSMUSG00000003161.16_0	chr5	+	2490	8	FSM	ENSMUSG00000003161.16	ENSMUST00000088786.11	2504	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAGATTTTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	8096085	8119373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8096216_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUSG00000003161.16_2	chr5	+	2240	8	FSM	ENSMUSG00000003161.16	ENSMUST00000148633.4	2251	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACATTCCATAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	8106537	8119151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8106640_8107537_8107622_8109352_8109423_8112383_8112428_8113259_8113408_8113636_8113751_8114557_8114617_8117532
ENSMUSG00000003166.21_0	chr16	-	4026	10	FSM	ENSMUSG00000003166.21	ENSMUST00000012152.13	4045	10	10	9	10	-3	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAAAAGCATGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17709547	17658227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676444_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003166.21_1	chr16	-	3976	10	FSM	ENSMUSG00000003166.21	ENSMUST00000117945.8	4003	10	18	9	15	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAAAAGCATGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17709506	17658227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003166.21_4	chr16	-	3773	9	FSM	ENSMUSG00000003166.21	ENSMUST00000066127.13	3790	9	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAAAAGCATGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17709507	17658227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17709249
ENSMUSG00000003166.21_7	chr16	-	1984	11	FSM	ENSMUSG00000003166.21	ENSMUST00000155943.9	1996	11	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGGCACTCAGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	17711962	17660230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17660642_17661835_17662073_17662846_17663000_17667454_17667659_17674615_17674793_17675121_17675199_17676223_17676435_17677267_17677391_17690426_17690550_17711265_17711443_17711871
ENSMUSG00000003184.16_0	chr7	+	2022	8	FSM	ENSMUSG00000003184.16	ENSMUST00000003284.16	2031	8	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44647076	44652268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44647333_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003184.16_2	chr7	+	1698	8	FSM	ENSMUSG00000003184.16	ENSMUST00000209066.2	1712	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATCTGCTGTCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	44647100	44651810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44647491_44648128_44648302_44649315_44649488_44649577_44649649_44649795_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003184.16_4	chr7	+	1513	7	FSM	ENSMUSG00000003184.16	ENST00000597198.5	1527	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCACTCAGCTGCTACC	NA	NA	NA	NA	NA	NA	NA	NA	44647205	44651769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44647479_44648128_44648302_44649315_44649492_44649755_44649971_44650068_44650447_44651096_44651213_44651587
ENSMUSG00000003190.13_0	chr7	-	1058	7	FSM	ENSMUSG00000003190.13	ENSMUST00000003290.12	1075	7	10	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGAGCCCGAAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	44646993	44640652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_13	chr7	-	1306	7	FSM	ENSMUSG00000003190.13	ENST00000441864.6	1323	7	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTTATGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44647343	44640751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44640879_44642167_44642456_44643603_44643696_44643786_44643874_44645967_44646108_44646301_44646417_44646886
ENSMUSG00000003190.13_3	chr7	-	855	4	FSM	ENSMUSG00000003190.13	ENST00000614495.4	865	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTATTTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44647347	44640742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44640879_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003190.13_4	chr7	-	1077	6	FSM	ENSMUSG00000003190.13	ENST00000619007.4	1090	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTATTTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44647344	44640742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44640875_44643553_44643696_44643786_44643874_44645967_44646111_44646301_44646417_44646886
ENSMUSG00000003198.11_0	chr17	+	2020	4	FSM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATTATATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	56199123	56205924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56199187_56202820_56202948_56203140_56203202_56204155
ENSMUSG00000003198.11_1	chr17	+	1938	3	ISM	ENSMUSG00000003198.11	ENSMUST00000054780.10	2028	4	3709	15	3709	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACTGTGAATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	56202828	56205913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56202948_56203140_56203202_56204155
ENSMUSG00000003199.17_0	chr17	+	1692	13	FSM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	56316200	56323781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56316257_56316329_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ENSMUSG00000003199.17_4	chr17	+	1630	12	ISM	ENSMUSG00000003199.17	ENSMUST00000149441.8	1701	13	135	9	105	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAATTAGGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	56316335	56323781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56316587_56317276_56317514_56317987_56318112_56318617_56318700_56318865_56318963_56319270_56319344_56319415_56319493_56321940_56322110_56322207_56322279_56322470_56322561_56322903_56322997_56323515
ENSMUSG00000003200.11_0	chr17	-	2057	10	FSM	ENSMUSG00000003200.11	ENSMUST00000003268.11	2073	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGCCACTGTCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	56343624	56323754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56324737_56324843_56324901_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326999_56327122_56327192_56343414
ENSMUSG00000003200.11_4	chr17	-	884	6	FSM	ENSMUSG00000003200.11	ENST00000582245.1	898	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGACTGGGCCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	56326448	56324546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56324776_56324982_56325108_56325574_56325679_56325803_56325963_56326039_56326174_56326315
ENSMUSG00000003200.11_5	chr17	-	723	7	NIC	ENSMUSG00000003200.11	novel	726	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGTGTGTCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	56343459	56325576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326996_56327122_56327192_56343414
ENSMUSG00000003200.11_6	chr17	-	675	6	NIC	ENSMUSG00000003200.11	novel	1375	9	NA	NA	-726	-3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGTGTGTCCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	56327188	56325576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_56325679_56325803_56325963_56326039_56326174_56326315_56326460_56326925_56326996_56327122
ENSMUSG00000003208.10_0	chr17	+	1646	8	FSM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	4	10	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGAAATGTTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56266177	56275275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56266262_56267712_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUSG00000003208.10_6	chr17	+	1562	7	ISM	ENSMUSG00000003208.10	ENSMUST00000086869.6	1660	8	1539	10	1539	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGAAATGTTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56267712	56275275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56267814_56269018_56269164_56271129_56271265_56271485_56271668_56272168_56272290_56273507_56273638_56274527
ENSMUSG00000003226.8_0	chr10	+	9595	29	FSM	ENSMUSG00000003226.8	ENSMUST00000003310.7	9608	29	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAATGCAGATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	58282752	58330174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58311978_58316642_58318850_58319022_58319718_58319806_58320263_58320443_58321501_58321704_58324394_58324497_58326431_58326578_58328232_58328507_58328623_58328959_58329484
ENSMUSG00000003226.8_11	chr10	+	139	2	ISM	ENSMUSG00000003226.8	ENST00000629728.1	156	3	1	2537	1	-2537	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACCAAACTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	58282802	58287873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_58282874_58287805
ENSMUSG00000003226.8_12	chr10	+	4841	19	FSM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGAAAAGGGTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	58287806	58316628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_16	chr10	+	4505	17	FSM	ENSMUSG00000003226.8	ENST00000409750.5	4518	17	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAAAAGGGTAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	58287805	58316630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_28	chr10	+	4770	18	ISM	ENSMUSG00000003226.8	ENST00000016946.8	4857	19	1332	15	1332	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACCAGAAAAGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	58289135	58316626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003226.8_3	chr10	+	4929	20	FSM	ENSMUSG00000003226.8	ENST00000408999.4	4948	20	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACCAGAAAAGGGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	58282785	58316627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58282874_58287805_58287874_58289133_58289246_58290394_58290548_58291040_58291272_58291630_58291777_58293413_58293607_58296339_58296428_58297657_58297868_58299640_58299823_58299904_58300081_58300226_58300351_58300886_58301049_58301265_58301404_58301484_58301632_58302936_58303117_58303211_58303296_58306448_58306585_58311065_58311161_58314411
ENSMUSG00000003228.10_0	chr19	+	6568	16	FSM	ENSMUSG00000003228.10	ENSMUST00000003313.10	6580	16	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAACATAACATTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	60878187	61084395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_60879070_60976139_60976236_61020189_61020303_61034514_61034593_61056985_61057087_61057741_61057835_61060871_61060936_61061826_61061968_61065075_61065267_61067774_61067813_61069291_61069382_61071498_61071708_61074509_61074648_61078348_61078487_61078945_61079078_61080331
ENSMUSG00000003233.13_0	chr16	+	2508	15	FSM	ENSMUSG00000003233.13	ENSMUST00000003318.13	2519	15	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCAAGGATGAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20335733	20350412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829
ENSMUSG00000003233.13_1	chr16	+	3970	16	FSM	ENSMUSG00000003233.13	ENSMUST00000171572.9	3983	16	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTATTATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	20335819	20352753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20336106_20341005_20341076_20342159_20342282_20342401_20342512_20342689_20342826_20343001_20343096_20343268_20343339_20344388_20344529_20344655_20344733_20344838_20344907_20345016_20345167_20345698_20345831_20346001_20346170_20349526_20349743_20349829_20350241_20351033
ENSMUSG00000003234.17_0	chr16	+	3073	21	FSM	ENSMUSG00000003234.17	ENSMUST00000003319.6	3090	21	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGGAGGACACGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	20367335	20380121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20367496_20367715_20367864_20367984_20368065_20368493_20368541_20368753_20368852_20368951_20369075_20369170_20369438_20370223_20370305_20370393_20370454_20370555_20370613_20370711_20370735_20370848_20370905_20371008_20371210_20371303_20371381_20377309_20377355_20377446_20377580_20378040_20378130_20378390_20378483_20378664_20378798_20378932_20379021_20379106
ENSMUSG00000003235.14_0	chr16	+	2545	16	FSM	ENSMUSG00000003235.14	ENSMUST00000003320.14	2554	16	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTTGTACTTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	20317575	20328073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20317847_20318934_20319060_20320113_20320300_20320379_20320558_20320653_20320735_20320992_20321071_20321279_20321593_20323394_20323541_20323948_20324091_20324211_20324314_20324877_20324986_20325130_20325222_20325757_20325882_20326777_20326904_20327458_20327570_20327710
ENSMUSG00000003269.18_0	chr7	-	2507	12	FSM	ENSMUSG00000003269.18	ENSMUST00000107729.10	2519	12	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAGGGCTAGGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	45463727	45456064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457874_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUSG00000003269.18_1	chr7	-	2512	12	FSM	ENSMUSG00000003269.18	ENSMUST00000056820.13	2527	12	11	4	6	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAGGGCTAGGAACGC	NA	NA	NA	NA	NA	NA	NA	NA	45463729	45456064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45457273_45457356_45457512_45457599_45457672_45457796_45457877_45459550_45459663_45459994_45460144_45460277_45460391_45460952_45461034_45461603_45461723_45462270_45462338_45462432_45462581_45463521
ENSMUSG00000003271.18_0	chr7	-	1174	7	FSM	ENSMUSG00000003271.18	ENSMUST00000075571.16	1193	7	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCACTCCCTCCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45409022	45379411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45379624_45380661_45380843_45383042_45383138_45383410_45383538_45384558_45384768_45391477_45391621_45408815
ENSMUSG00000003273.15_0	chr7	+	1577	9	FSM	ENSMUSG00000003273.15	ENSMUST00000003360.10	1585	9	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCACTTCTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45349272	45354104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45349764_45349849_45349925_45350647_45350791_45351857_45352044_45352256_45352353_45352485_45352559_45352882_45353038_45353136_45353303_45353912
ENSMUSG00000003279.18_1	chr17	+	2291	11	FSM	ENSMUSG00000003279.18	ENST00000539435.5	2306	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTCATGCAGACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	70868762	71125412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_70868867_70900161_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
ENSMUSG00000003279.18_10	chr17	+	2189	10	ISM	ENSMUSG00000003279.18	ENST00000539435.5	2306	11	31407	5	31407	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTCATGCAGACATCCA	NA	NA	NA	NA	NA	NA	NA	NA	70900159	71125412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_70900377_70964448_70964627_70969563_70969805_71025190_71025221_71068069_71068441_71072992_71073085_71093782_71094205_71116182_71116275_71122188_71122342_71125019
ENSMUSG00000003282.10_0	chr4	-	1652	3	FSM	ENSMUSG00000003282.10	ENST00000423799.6	1677	3	13	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATAATAGGAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	3938380	3903559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3904948_3908905_3909003_3938213
ENSMUSG00000003282.10_3	chr4	-	1887	4	FSM	ENSMUSG00000003282.10	ENST00000429357.2	1894	4	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGTCTGGGCCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	3938391	3903694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3904948_3905446_3905806_3908905_3909003_3938213
ENSMUSG00000003299.11_0	chr9	+	1264	9	FSM	ENSMUSG00000003299.11	ENSMUST00000003386.7	1288	9	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAAAATGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	20914045	20920123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20914294_20914379_20914447_20914549_20914701_20917429_20917482_20918122_20918241_20918729_20918837_20918926_20919037_20919118_20919196_20919789
ENSMUSG00000003308.16_0	chr9	-	3134	6	FSM	ENSMUSG00000003308.16	ENSMUST00000194542.6	3151	6	10	7	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGTGTGGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21150618	21141032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150371
ENSMUSG00000003308.16_1	chr9	-	3156	6	FSM	ENSMUSG00000003308.16	ENSMUST00000049567.10	3172	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGTGTGGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	21150357	21141032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150088
ENSMUSG00000003308.16_2	chr9	-	3598	5	FSM	ENSMUSG00000003308.16	ENSMUST00000164812.8	3614	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAAACCCGTCTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	21150098	21141367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366
ENSMUSG00000003308.16_4	chr9	-	2155	6	FSM	ENSMUSG00000003308.16	ENSMUST00000193982.2	2163	6	6	2	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAGAAAAAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21150369	21141930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21142165_21142545_21142723_21142992_21143199_21144683_21145370_21148366_21149053_21150203
ENSMUSG00000003309.15_0	chr9	-	942	7	FSM	ENSMUSG00000003309.15	ENST00000433173.1	959	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGTAAGGTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	21217040	21207735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21207805_21209495_21209622_21210574_21210734_21213757_21213824_21213918_21214062_21216577_21216705_21216788
ENSMUSG00000003316.15_0	chr8	-	7005	26	FSM	ENSMUSG00000003316.15	ENSMUST00000169020.8	7021	26	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCCAAAACAAAACAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	111985837	111881057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003316.15_11	chr8	-	4424	27	FSM	ENSMUSG00000003316.15	ENST00000205061.9	4440	27	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGATGAGACTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	111985835	111882652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111883546_111884529_111884694_111886430_111886538_111887252_111887374_111888057_111888166_111888998_111889101_111889269_111889413_111890402_111890527_111892188_111892327_111895292_111895386_111896119_111896238_111897861_111897951_111899046_111899161_111899833_111899897_111900865_111900953_111904276_111904415_111905464_111905619_111907566_111907669_111909162_111909285_111914345_111914561_111915298_111915483_111917821_111917894_111919155_111919360_111924224_111924441_111926767_111926855_111928157_111928191_111985402
ENSMUSG00000003344.15_0	chr10	-	2441	9	FSM	ENSMUSG00000003344.15	ENSMUST00000126980.8	2449	9	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATCGAGTGCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80492328	80478458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80479526_80479659_80479807_80480095_80480184_80480436_80480630_80481173_80481372_80482214_80482321_80483538_80483696_80484393_80484514_80491963
ENSMUSG00000003345.17_0	chr10	+	2313	11	FSM	ENSMUSG00000003345.17	ENSMUST00000079773.14	2348	11	6	29	6	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80458677	80476546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80458785_80470047_80470476_80473721_80473763_80473843_80474144_80474227_80474463_80474539_80474626_80474713_80474799_80474918_80475068_80475413_80475498_80475601_80475709_80475855
ENSMUSG00000003346.15_0	chr10	-	1445	5	FSM	ENSMUSG00000003346.15	ENSMUST00000003436.12	1468	5	14	9	-3	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTTTAGGGTTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	80426161	80419496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80419898_80419976_80420157_80421441_80421637_80422348_80422865_80426008
ENSMUSG00000003346.15_2	chr10	-	839	4	FSM	ENSMUSG00000003346.15	ENST00000590661.1	851	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGCTGCAGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	80422682	80419673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80419898_80419976_80420117_80421441_80421583_80422348
ENSMUSG00000003346.15_3	chr10	-	1343	5	FSM	ENSMUSG00000003346.15	ENST00000250974.9	1349	5	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGCTGCAGGGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	80426077	80419673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80419898_80419976_80420157_80421441_80421792_80422348_80422865_80426004
ENSMUSG00000003348.11_0	chr10	-	2678	4	FSM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGCGGGCTGCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80537688	80521089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80523008_80525685_80525889_80526902_80527402_80537630
ENSMUSG00000003348.11_1	chr10	-	2615	3	ISM	ENSMUSG00000003348.11	ENSMUST00000003438.11	2682	4	10293	3	10293	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGCGGGCTGCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80527396	80521089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80523008_80525685_80525889_80526902
ENSMUSG00000003352.15_0	chr15	+	2497	13	FSM	ENSMUSG00000003352.15	ENSMUST00000109150.9	2513	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTCCGGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98530266	98542404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98530402_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003352.15_10	chr15	+	2464	13	FSM	ENSMUSG00000003352.15	ENSMUST00000230490.2	2477	13	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTCCGGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98532992	98542404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539057_98539139_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003352.15_7	chr15	+	2725	12	FSM	ENSMUSG00000003352.15	ENSMUST00000003442.9	2734	12	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCCCTCCGGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98532650	98542404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98533095_98537368_98537492_98537694_98537818_98538219_98538336_98538566_98538632_98538839_98538860_98539280_98539340_98539496_98539607_98539819_98539972_98540189_98540286_98540382_98540533_98541137
ENSMUSG00000003354.7_0	chr15	+	1861	8	FSM	ENSMUSG00000003354.7	ENSMUST00000003444.6	1900	8	13	26	-11	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAAAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98606100	98621191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98606418_98606935_98607104_98615304_98615475_98616592_98616732_98618464_98618663_98618838_98619058_98620398_98620552_98620694
ENSMUSG00000003354.7_1	chr15	+	548	3	FSM	ENSMUSG00000003354.7	ENSMUST00000229471.2	566	3	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTCTGTATTCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	98606129	98608751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98606418_98606935_98607104_98608659
ENSMUSG00000003354.7_2	chr15	+	661	4	FSM	ENSMUSG00000003354.7	ENST00000512059.2	674	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAACCACAGAAGCAACC	NA	NA	NA	NA	NA	NA	NA	NA	98618571	98620888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98618667_98618838_98619058_98620398_98620552_98620694
ENSMUSG00000003355.8_0	chr15	-	722	6	FSM	ENSMUSG00000003355.8	ENSMUST00000003445.8	734	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGACGTTGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	98626070	98622253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98622484_98624364_98624436_98624780_98624815_98625091_98625180_98625563_98625630_98625837
ENSMUSG00000003360.16_0	chr15	-	3172	17	FSM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAATATTAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98560770	98543029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110_98556317_98560703
ENSMUSG00000003360.16_16	chr15	-	2438	16	FSM	ENSMUSG00000003360.16	ENST00000552545.1	2454	16	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCGCCTGACTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98556301	98543675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550414_98550768_98550863_98554482_98554594_98556110
ENSMUSG00000003360.16_2	chr15	-	3106	16	ISM	ENSMUSG00000003360.16	ENSMUST00000003450.15	3187	17	4453	15	-1	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAATATTAAAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98556317	98543029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_98543899_98544224_98544400_98545043_98545153_98545354_98545507_98546367_98546611_98547595_98547774_98548024_98548171_98548473_98548700_98548793_98548938_98549124_98549238_98549345_98549480_98549798_98549938_98550353_98550420_98550768_98550863_98554482_98554594_98556110
ENSMUSG00000003363.16_0	chr7	-	2264	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117095.8	2282	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	27252625	27231430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27244612_27244688_27252422
ENSMUSG00000003363.16_2	chr7	-	2283	14	FSM	ENSMUSG00000003363.16	ENSMUST00000117611.8	2297	14	8	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGTGGTATGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	27252635	27231430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27231911_27231999_27232100_27233070_27233237_27235213_27235354_27237004_27237206_27238774_27238903_27238979_27239095_27240509_27240694_27241110_27241254_27241338_27241414_27241513_27241607_27242168_27242330_27248434_27248519_27252422
ENSMUSG00000003380.12_0	chr7	-	890	5	FSM	ENSMUSG00000003380.12	ENSMUST00000076961.9	899	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTCCTGGTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24672170	24669176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24669435_24669511_24669614_24671185_24671284_24671526_24671740_24671951
ENSMUSG00000003380.12_8	chr7	-	507	4	FSM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTCTGTTCTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	24672012	24669299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24669435_24671185_24671284_24671526_24671740_24671951
ENSMUSG00000003380.12_9	chr7	-	440	3	ISM	ENSMUSG00000003380.12	ENST00000601891.5	509	4	280	1	280	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGTCTGTTCTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	24671733	24669299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_24669435_24671185_24671284_24671526
ENSMUSG00000003382.19_0	chr3	+	5289	5	FSM	ENSMUSG00000003382.19	ENSMUST00000119109.8	5309	5	0	20	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTAAAAACAAAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	87432713	87447443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87432967_87434567_87434624_87435176_87435415_87436530_87436647_87442817
ENSMUSG00000003402.15_0	chr9	+	2213	18	FSM	ENSMUSG00000003402.15	ENSMUST00000216344.2	2228	18	12	3	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21914113	21925515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21914389_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003402.15_12	chr9	+	1931	17	ISM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	388	3	-260	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21914701	21925515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003402.15_13	chr9	+	1941	17	ISM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	351	1	-249	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21914712	21925515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003402.15_17	chr9	+	1474	15	FSM	ENSMUSG00000003402.15	ENST00000587327.5	1490	15	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGGTAAGGACGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	21914974	21924456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922999_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311
ENSMUSG00000003402.15_5	chr9	+	2002	18	FSM	ENSMUSG00000003402.15	ENSMUST00000003493.9	2012	18	7	3	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21914320	21925515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922872_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003402.15_9	chr9	+	1982	18	FSM	ENSMUSG00000003402.15	ENSMUST00000115331.10	1983	18	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTGTGGCTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21914361	21925515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21914385_21914694_21914834_21914972_21915090_21915793_21915890_21915986_21916045_21917835_21917954_21919539_21919670_21921452_21921538_21921819_21921899_21922462_21922550_21922733_21922893_21922969_21923067_21923329_21923400_21923514_21923605_21923974_21924050_21924131_21924232_21924311_21924463_21925207
ENSMUSG00000003410.9_0	chr9	-	4721	8	FSM	ENSMUSG00000003410.9	ENST00000359227.8	4741	8	10	10	-3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTTAAGTCTCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	21963309	21926310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21928450_21928735_21930151_21935969_21936009_21937468_21937695_21937803_21937958_21947607_21947712_21947936_21948157_21962885
ENSMUSG00000003411.11_0	chr4	+	3310	5	FSM	ENSMUSG00000003411.11	ENSMUST00000106650.9	3327	5	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTGTATCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	108736276	108800521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108736416_108747504_108747733_108781102_108781222_108786598_108786724_108797822
ENSMUSG00000003420.9_0	chr7	-	1750	7	FSM	ENSMUSG00000003420.9	ENSMUST00000003512.9	1770	7	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATCATATAGACACCTC	NA	NA	NA	NA	NA	NA	NA	NA	44753265	44742423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751837_44752096_44752426_44752698_44753063
ENSMUSG00000003420.9_6	chr7	-	1596	7	FSM	ENSMUSG00000003420.9	ENSMUST00000210642.2	1602	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGTGTGTGCATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	44753163	44742487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44742780_44743205_44743323_44744583_44744854_44751333_44751610_44751825_44752096_44752426_44752698_44753063
ENSMUSG00000003421.14_0	chr7	+	1811	9	FSM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44711882	44727634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44711956_44722913_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003421.14_1	chr7	+	1738	8	ISM	ENSMUSG00000003421.14	ENSMUST00000003513.11	1814	9	11034	0	10964	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTTGTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	44722913	44727634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_44722989_44723405_44723512_44724029_44724112_44725492_44725653_44725733_44725853_44725975_44726164_44726244_44726354_44726735
ENSMUSG00000003423.16_0	chr7	+	1063	10	FSM	ENSMUSG00000003423.16	ENSMUST00000210139.2	1077	10	13	1	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44803739	44809488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44803845_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003423.16_12	chr7	+	1071	10	FSM	ENSMUSG00000003423.16	ENSMUST00000107811.4	1072	10	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44805366	44809488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44805480_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003423.16_6	chr7	+	1168	10	FSM	ENSMUSG00000003423.16	ENSMUST00000085375.13	1185	10	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAGACAATGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44803754	44809488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44803965_44805729_44805824_44806155_44806223_44807026_44807207_44807864_44807927_44808010_44808093_44808413_44808544_44808676_44808753_44809104_44809249_44809365
ENSMUSG00000003429.12_0	chr7	-	642	5	FSM	ENSMUSG00000003429.12	ENSMUST00000003521.10	661	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	10567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGAACAGGCTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44773854	44771812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44771983_44772252_44772383_44772586_44772663_44772842_44772975_44773720
ENSMUSG00000003435.10_0	chr7	-	3509	30	FSM	ENSMUSG00000003435.10	ENSMUST00000003527.10	3513	30	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28038144	28014322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776_28037861_28038119
ENSMUSG00000003435.10_1	chr7	-	3485	29	FSM	ENSMUSG00000003435.10	ENSMUST00000209141.2	3755	29	270	0	71	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGTGTACGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	28037861	28014322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28029442_28029455_28030004_28030071_28030794_28030955_28037776
ENSMUSG00000003435.10_4	chr7	-	3306	28	NIC	ENSMUSG00000003435.10	novel	3755	29	NA	NA	4	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGACGCCCAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	28037928	28014556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_28014696_28014773_28014870_28015147_28015352_28015433_28015603_28015707_28015867_28016208_28016315_28016410_28016539_28016640_28016744_28016817_28016926_28017161_28017247_28018163_28018290_28018379_28018527_28019391_28019539_28019644_28019801_28021427_28021565_28021644_28021739_28021888_28021995_28023150_28023222_28023317_28023408_28025374_28025627_28028127_28028197_28028444_28028476_28028683_28028750_28028840_28028910_28029007_28029078_28030004_28030071_28030794_28030955_28037776
ENSMUSG00000003436.12_0	chr7	-	1590	6	FSM	ENSMUSG00000003436.12	ENST00000205143.4	1607	6	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCCCAGGTGAGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	28000982	27993778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27994349_27995712_27995936_27997939_27998162_27998317_27998561_27999591_27999650_28000708
ENSMUSG00000003437.15_0	chr7	+	1796	13	FSM	ENSMUSG00000003437.15	ENST00000595564.5	1805	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATCTCCTAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	28092361	28098806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28092680_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098434
ENSMUSG00000003437.15_10	chr7	+	1990	14	FSM	ENSMUSG00000003437.15	ENSMUST00000003529.9	2003	14	7	6	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATCTCCTAAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	28092382	28098807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28092680_28093093_28093124_28094467_28094561_28094842_28094965_28095053_28095121_28095195_28095298_28095376_28095483_28095558_28095628_28095708_28095813_28096034_28096152_28096245_28096375_28097872_28097979_28098083_28098175_28098250
ENSMUSG00000003438.18_0	chr7	-	1500	11	FSM	ENSMUSG00000003438.18	ENSMUST00000081946.5	1515	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTAGCTGCCGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	28011488	28004946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009503_28009526_28009720_28009753_28010293_28010445_28011349
ENSMUSG00000003438.18_6	chr7	-	1239	10	FSM	ENSMUSG00000003438.18	ENST00000607714.6	1256	10	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCACCACCACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	28011461	28005180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28005456_28005847_28005955_28006246_28006404_28006977_28007077_28007169_28007275_28007572_28007693_28007778_28007838_28009698_28009753_28010293_28010445_28011349
ENSMUSG00000003444.9_0	chr7	-	1270	4	FSM	ENSMUSG00000003444.9	ENSMUST00000003536.9	1281	4	10	1	-6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTAGCTCCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28092123	28085571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28086450_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003444.9_1	chr7	-	657	4	FSM	ENSMUSG00000003444.9	ENST00000594368.5	674	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGTCTTGCAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	28092107	28086098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28086380_28090236_28090322_28090514_28090574_28091875
ENSMUSG00000003452.16_0	chr6	+	9662	9	FSM	ENSMUSG00000003452.16	ENSMUST00000086829.11	9667	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTACTGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	149310481	149464822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149451847_149451924_149458141
ENSMUSG00000003452.16_1	chr6	+	4044	8	FSM	ENSMUSG00000003452.16	ENSMUST00000111513.9	4049	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	149310518	149459317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149311140_149385481_149385695_149396057_149396211_149413189_149413616_149414293_149415389_149418430_149418583_149420403_149420612_149458141
ENSMUSG00000003452.16_3	chr6	+	824	2	FSM	ENSMUSG00000003452.16	ENST00000550207.1	846	2	12	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATCACCAATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	149310935	149311865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149311140_149311245
ENSMUSG00000003458.13_0	chr1	-	2885	17	FSM	ENSMUSG00000003458.13	ENSMUST00000003550.11	2901	17	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTACTTGTTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	171910354	171893587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171894364_171894897_171895111_171895355_171895511_171895752_171895841_171896128_171896225_171896328_171896432_171897542_171897716_171898817_171898896_171899031_171899137_171899687_171899841_171900032_171900143_171900343_171900495_171901839_171901986_171902481_171902604_171902971_171903096_171908778_171908884_171910167
ENSMUSG00000003464.14_0	chr1	+	1903	8	FSM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	8	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTGTGTGGGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	171954329	171962844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171954416_171956197_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003464.14_10	chr1	+	1817	7	ISM	ENSMUSG00000003464.14	ENSMUST00000075895.9	1917	8	1876	6	1869	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGTGTGTGGGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	171956197	171962844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_171956308_171956721_171956888_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003464.14_7	chr1	+	2834	6	FSM	ENSMUSG00000003464.14	ENSMUST00000111252.4	2844	6	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAAATACTAAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	171954330	171964052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171954416_171957468_171957555_171958178_171958341_171960696_171960874_171961566_171961612_171961773
ENSMUSG00000003476.17_0	chr6	-	1366	12	FSM	ENSMUSG00000003476.17	ENST00000341843.8	1379	12	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGTCACCGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	55100722	55068263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_55068404_55069497_55069540_55069936_55070073_55070263_55070350_55076196_55076270_55077047_55077109_55077606_55077761_55079735_55079854_55080152_55080263_55081708_55081795_55094398_55094554_55100517
ENSMUSG00000003500.14_0	chr6	-	2635	15	FSM	ENSMUSG00000003500.14	ENST00000338791.11	2649	15	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATCCTGTTTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	29216282	29200432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212280_29216070
ENSMUSG00000003500.14_12	chr6	-	2420	14	FSM	ENSMUSG00000003500.14	ENSMUST00000078155.12	2437	14	9	8	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGCCTCTGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	29212287	29200443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067
ENSMUSG00000003500.14_14	chr6	-	2571	15	FSM	ENSMUSG00000003500.14	ENSMUST00000159124.8	2600	15	21	8	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGCCTCTGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	29216342	29200443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212167_29216070
ENSMUSG00000003500.14_17	chr6	-	2564	15	FSM	ENSMUSG00000003500.14	ENSMUST00000162099.8	2580	15	9	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGCCTCTGTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	29216332	29200443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29201219_29202445_29202530_29202664_29202809_29203100_29203246_29203347_29203492_29204277_29204374_29204567_29204659_29205049_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218_29209268_29212067_29212170_29216070
ENSMUSG00000003500.14_38	chr6	-	1188	12	ISM	ENSMUSG00000003500.14	ENST00000407347.2	1209	13	0	1248	0	-1248	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGGTAGCCTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	29209267	29202445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_29202530_29202664_29202809_29203100_29203176_29203417_29203492_29204277_29204374_29204567_29204647_29205134_29205250_29206064_29206153_29206304_29206512_29206921_29206997_29207093_29207196_29209218
ENSMUSG00000003518.14_0	chr11	-	4074	3	FSM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACAAAGACGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101874329	101861978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101865766_101872442_101872670_101874269
ENSMUSG00000003518.14_1	chr11	-	4193	3	FSM	ENSMUSG00000003518.14	ENSMUST00000003612.13	4212	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACAAAGACGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101875616	101861978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101865766_101872442_101872670_101875437
ENSMUSG00000003518.14_2	chr11	-	4291	4	FSM	ENSMUSG00000003518.14	ENSMUST00000107173.9	4311	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACAAAGACGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101877829	101861978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101877692
ENSMUSG00000003518.14_3	chr11	-	4424	5	FSM	ENSMUSG00000003518.14	ENSMUST00000107172.8	4445	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACAAAGACGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101877828	101861978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101865766_101872442_101872670_101875437_101875578_101876947_101877082_101877692
ENSMUSG00000003518.14_4	chr11	-	4005	2	ISM	ENSMUSG00000003518.14	ENSMUST00000151678.8	4084	3	1669	10	1669	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTACAAAGACGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101872660	101861978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101865766_101872442
ENSMUSG00000003526.13_0	chr16	-	2370	14	FSM	ENSMUSG00000003526.13	ENSMUST00000003620.13	2386	14	6	10	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGTCATCACCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17907150	17889598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898940_17899394_17899430_17902410_17902620_17906751
ENSMUSG00000003526.13_4	chr16	-	1496	12	FSM	ENSMUSG00000003526.13	ENST00000334029.6	1514	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCACCGCAGGAGCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	17902599	17890041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17890228_17890313_17890403_17891418_17891518_17894105_17894282_17895307_17895455_17895654_17895748_17897050_17897133_17897775_17897856_17898029_17898147_17898326_17898392_17898789_17898963_17902410
ENSMUSG00000003527.10_0	chr16	-	2805	10	FSM	ENSMUSG00000003527.10	ENSMUST00000003621.10	2821	10	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	17729198	17718574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725787_17727768_17727865_17727951_17728121_17729025
ENSMUSG00000003527.10_1	chr16	-	2763	10	FSM	ENSMUSG00000003527.10	ENSMUST00000232423.2	2785	10	20	2	20	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTTTCTATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	17729159	17718574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17720188_17720681_17720798_17722865_17722976_17724134_17724238_17724972_17725107_17725383_17725502_17725613_17725784_17727768_17727865_17727951_17728121_17729025
ENSMUSG00000003528.16_0	chr16	-	1654	9	FSM	ENSMUSG00000003528.16	ENSMUST00000003622.16	1666	9	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCCTGTCCATCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	17746072	17743087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17743792_17743893_17743968_17744052_17744169_17744298_17744404_17744519_17744605_17745017_17745157_17745230_17745331_17745408_17745517_17745849
ENSMUSG00000003531.16_1	chr16	+	1070	5	FSM	ENSMUSG00000003531.16	ENSMUST00000151266.8	1086	5	10	6	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGATCCTTTCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	17884276	17889221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887954_17888096_17888741
ENSMUSG00000003531.16_4	chr16	+	1043	5	FSM	ENSMUSG00000003531.16	ENSMUST00000066027.14	1050	5	6	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGATCCTTTCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	17884312	17889221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17884464_17884559_17884721_17887287_17887389_17887945_17888096_17888741
ENSMUSG00000003531.16_7	chr16	+	1410	4	FSM	ENSMUSG00000003531.16	ENSMUST00000155387.8	1415	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGGCAGAGGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	17884316	17889496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17884721_17887287_17887389_17887945_17888096_17888741
ENSMUSG00000003534.18_5	chr17	-	3580	17	FSM	ENSMUSG00000003534.18	ENST00000376569.7	3594	17	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTTTTGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36011453	35992487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35996197_35996443_35998036_35998203_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679_36004810_36011322
ENSMUSG00000003534.18_6	chr17	-	3115	15	FSM	ENSMUSG00000003534.18	ENST00000446312.5	3126	15	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTTTTGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36004802	35992487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35993411_35993515_35993666_35994328_35994564_35994986_35995206_35995886_35996015_35998036_35998121_35999430_35999583_35999677_35999762_36000558_36000806_36000885_36001073_36002019_36002123_36002338_36002487_36003747_36003977_36004483_36004587_36004679
ENSMUSG00000003541.7_0	chr17	+	1113	2	FSM	ENSMUSG00000003541.7	ENSMUST00000003635.7	1131	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAGTTCTCGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36132586	36133808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36132821_36132929
ENSMUSG00000003546.11_0	chr17	-	2306	16	FSM	ENSMUSG00000003546.11	ENSMUST00000233974.2	2313	16	0	7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTGTGTTCGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46956948	46941556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956900
ENSMUSG00000003546.11_1	chr17	-	2248	15	ISM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	638	4	3	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACATTTTGTGTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	46955432	46941560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174
ENSMUSG00000003546.11_15	chr17	-	1829	14	FSM	ENSMUSG00000003546.11	ENST00000453940.6	1847	14	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCTGACTGAGGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	46955424	46941740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46955174
ENSMUSG00000003546.11_7	chr17	-	2314	16	FSM	ENSMUSG00000003546.11	ENSMUST00000003642.7	2322	16	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGTAACATTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	46956070	46941564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46942000_46942753_46942818_46942958_46943075_46943675_46943817_46946335_46946445_46946657_46946729_46946901_46946955_46947118_46947219_46947545_46947720_46947838_46947941_46950320_46950409_46950816_46951037_46951548_46951631_46953039_46953271_46955174_46955439_46956006
ENSMUSG00000003549.10_1	chr7	+	1364	10	FSM	ENSMUSG00000003549.10	ENSMUST00000003645.9	1375	10	7	4	7	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCCAGTGGCTCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	19078709	19090445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19079122_19079530_19079643_19082325_19082542_19084085_19084190_19084617_19084718_19086553_19086631_19088250_19088351_19089025_19089098_19089217_19089287_19090343
ENSMUSG00000003555.9_0	chr19	-	1251	6	FSM	ENSMUSG00000003555.9	ENST00000638190.1	1268	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCCGAATCTAACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	46661314	46655765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46656048_46656452_46656557_46657110_46657281_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003555.9_3	chr19	-	1467	7	FSM	ENSMUSG00000003555.9	ENST00000638971.1	1484	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCCGAATCTAACGTCC	NA	NA	NA	NA	NA	NA	NA	NA	46661314	46655765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46656048_46656452_46656557_46657110_46657281_46657584_46657801_46658976_46659207_46659395_46659532_46660985
ENSMUSG00000003559.9_0	chr19	+	1731	11	FSM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCACAATGGATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	46695896	46729529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46695976_46696194_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUSG00000003559.9_3	chr19	+	1645	10	ISM	ENSMUSG00000003559.9	ENSMUST00000003655.9	1736	11	298	12	-212	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGATACCACAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	46696194	46729522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_46696239_46696508_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUSG00000003559.9_4	chr19	+	1609	9	FSM	ENSMUSG00000003559.9	ENSMUST00000237219.2	1719	9	98	12	98	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATACCACAATGGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	46696504	46729526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46696637_46697406_46697558_46697985_46698123_46700659_46700730_46703627_46703710_46708327_46708460_46708752_46708896_46713342_46713478_46728899
ENSMUSG00000003573.16_2	chr8	+	2422	10	FSM	ENSMUSG00000003573.16	ENSMUST00000110124.9	2445	10	12	11	-8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGTGAGATCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	70735660	70747000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70735751_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003573.16_31	chr8	+	940	7	FSM	ENSMUSG00000003573.16	ENST00000594439.5	958	7	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGTCTGCCATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70738054	70745809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70738201_70738580_70738713_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003573.16_6	chr8	+	1285	10	FSM	ENSMUSG00000003573.16	ENST00000392351.8	1298	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGTCTGCCATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	70735676	70745809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70735821_70737883_70737966_70738043_70738201_70738580_70738713_70742043_70742152_70742701_70742824_70743656_70743814_70743967_70744079_70744166_70744254_70745624
ENSMUSG00000003575.14_0	chr8	-	5675	14	FSM	ENSMUSG00000003575.14	ENSMUST00000076615.6	5683	14	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCCTCTTCCTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70892221	70835004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70838986_70840190_70840372_70840724_70840812_70843851_70843954_70844510_70844814_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544_70861662_70892082
ENSMUSG00000003575.14_5	chr8	-	1429	10	FSM	ENSMUSG00000003575.14	ENST00000601916.1	1438	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGCCTGGCGTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	70861649	70838607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70838986_70840190_70840372_70845571_70845706_70850395_70850605_70850945_70850987_70853268_70853355_70855080_70855176_70857908_70857971_70858727_70858866_70861544
ENSMUSG00000003581.15_0	chr11	+	1854	9	FSM	ENSMUSG00000003581.15	ENSMUST00000003677.11	1874	9	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAACATAAATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	4085213	4091164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4085564_4085813_4085958_4086559_4086632_4086711_4086798_4087211_4087369_4089738_4089859_4089934_4090079_4090297_4090401_4090486
ENSMUSG00000003604.15_0	chr2	+	1315	6	FSM	ENSMUSG00000003604.15	ENST00000306730.8	1334	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGATGTCACAGCTACAT	NA	NA	NA	NA	NA	NA	NA	NA	112323287	112461477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112323567_112344794_112344973_112455499_112455571_112458093_112458190_112460084_112460422_112461123
ENSMUSG00000003617.17_0	chr3	+	4018	19	FSM	ENSMUSG00000003617.17	ENSMUST00000091309.12	4029	19	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCCAATAATGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20011219	20047293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20011594_20018443_20018692_20020402_20020613_20022203_20022378_20023939_20024195_20025075_20025248_20026778_20026919_20027940_20028094_20029022_20029223_20031259_20031411_20033023_20033237_20034754_20034963_20036126_20036267_20037556_20037686_20039723_20039831_20041522_20041740_20042096_20042237_20043216_20043383_20046672
ENSMUSG00000003617.17_1	chr3	+	3991	19	FSM	ENSMUSG00000003617.17	ENSMUST00000108325.9	3183	19	-197	-611	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGTTAAATTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	20011250	20047300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20011594_20018443_20018692_20020402_20020613_20022203_20022378_20023939_20024195_20025075_20025248_20026778_20026919_20027940_20028094_20029025_20029223_20031259_20031411_20033023_20033237_20034754_20034963_20036126_20036267_20037556_20037686_20039723_20039831_20041522_20041740_20042096_20042237_20043216_20043383_20046672
ENSMUSG00000003617.17_2	chr3	+	4560	20	FSM	ENSMUSG00000003617.17	ENSMUST00000108329.8	4564	20	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAATTCATGATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20011218	20061770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20011594_20018443_20018692_20020402_20020613_20022203_20022378_20023939_20024195_20025075_20025248_20026778_20026919_20027940_20028094_20029022_20029223_20031259_20031411_20033023_20033237_20034754_20034963_20036126_20036267_20037556_20037686_20039723_20039831_20041522_20041740_20042096_20042237_20043216_20043383_20059630_20059736_20060713
ENSMUSG00000003617.17_5	chr3	+	4076	20	FSM	ENSMUSG00000003617.17	ENSMUST00000003714.13	4092	20	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTAAAAATATTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	20011237	20063298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20011594_20018443_20018692_20020402_20020613_20022203_20022378_20023939_20024195_20025075_20025248_20026778_20026919_20027940_20028094_20029025_20029223_20031259_20031411_20033023_20033237_20034754_20034963_20036126_20036267_20037556_20037686_20039723_20039831_20041522_20041740_20042096_20042237_20043216_20043383_20059630_20059736_20062703
ENSMUSG00000003617.17_7	chr3	+	4483	20	FSM	ENSMUSG00000003617.17	ENSMUST00000108328.8	4504	20	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAATTCATGATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20011292	20061770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_20011594_20018443_20018692_20020402_20020613_20022203_20022378_20023939_20024195_20025075_20025248_20026778_20026919_20027940_20028094_20029025_20029223_20031259_20031411_20033023_20033237_20034754_20034963_20036126_20036267_20037556_20037686_20039723_20039831_20041522_20041740_20042096_20042237_20043216_20043383_20059630_20059736_20060713
ENSMUSG00000003623.5_0	chr5	-	2983	18	FSM	ENSMUSG00000003623.5	ENSMUST00000003720.5	2996	18	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTACGGTTGAAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	9047317	9016038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_9016973_9018646_9018767_9018869_9018964_9019047_9019127_9019915_9020040_9023585_9023717_9023944_9024053_9024132_9024217_9026007_9026110_9027454_9027581_9028197_9028292_9033688_9033798_9037767_9037893_9038103_9038286_9039605_9039731_9043505_9043642_9046451_9046548_9047103
ENSMUSG00000003644.18_0	chr4	-	3116	22	FSM	ENSMUSG00000003644.18	ENSMUST00000105894.11	3135	22	12	7	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGCCCGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	133615096	133574607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133575486_133575832_133575971_133578011_133578130_133578248_133578326_133578475_133578638_133587363_133587523_133587821_133587912_133588127_133588254_133588726_133588858_133590958_133591062_133591316_133591382_133592335_133592425_133592671_133592743_133593073_133593217_133593672_133593711_133594433_133594541_133596576_133596657_133596809_133596891_133598860_133598943_133599197_133599315_133608227_133608273_133614880
ENSMUSG00000003660.11_0	chr2	+	6729	45	FSM	ENSMUSG00000003660.11	ENSMUST00000103220.4	6745	45	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTATATGTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	127050325	127082362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071961_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ENSMUSG00000003660.11_5	chr2	+	6707	45	NNC	ENSMUSG00000003660.11	novel	6745	45	NA	NA	23	-14	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGAAAAAACTATATGTC	NA	NA	NA	NA	NA	NA	NA	NA	127050341	127082357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_127050459_127050893_127051058_127052613_127052786_127053519_127053713_127054268_127054325_127056726_127056826_127057968_127058122_127058273_127058374_127058532_127058670_127059148_127059233_127059311_127059486_127059792_127059931_127060272_127060429_127060948_127061120_127063664_127063859_127064050_127064175_127066500_127066651_127067002_127067114_127067925_127068058_127068214_127068404_127068864_127069063_127069796_127069950_127070064_127070146_127070461_127070546_127070978_127071086_127071405_127071525_127071805_127071960_127072053_127072244_127072433_127072608_127073606_127073768_127074325_127074554_127074820_127075013_127075099_127075279_127075419_127075572_127076883_127076993_127077879_127077989_127078378_127078569_127078659_127078825_127079380_127079503_127079742_127079887_127079978_127080156_127080419_127080581_127080658_127080741_127081798_127081892_127081988
ENSMUSG00000003662.11_0	chr2	-	3067	7	FSM	ENSMUSG00000003662.11	ENSMUST00000003759.11	3075	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCTTTTAGTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	127089728	127082857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127084958_127086832_127086921_127087642_127087845_127088332_127088422_127088521_127088634_127088929_127089079_127089401
ENSMUSG00000003665.8_0	chr17	-	2090	5	FSM	ENSMUSG00000003665.8	ENSMUST00000003762.8	2095	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCTCTTCCCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	18075450	18063589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_18064562_18067812_18067946_18068409_18068636_18070202_18070911_18075399
ENSMUSG00000003665.8_1	chr17	-	2036	4	ISM	ENSMUSG00000003665.8	ENSMUST00000003762.8	2095	5	4543	5	4543	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCCTCTTCCCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	18070907	18063589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_18064562_18067812_18067946_18068409_18068636_18070202
ENSMUSG00000003680.17_0	chr19	-	2051	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176610.9	2065	12	5	9	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCGGAAGTGACGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8763675	8751864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8763573
ENSMUSG00000003680.17_1	chr19	-	1959	11	ISM	ENSMUSG00000003680.17	ENSMUST00000177216.8	2167	12	1076	2	1076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	8762545	8751857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485
ENSMUSG00000003680.17_3	chr19	-	2002	11	FSM	ENSMUSG00000003680.17	ENSMUST00000177056.8	2006	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACGTGTCTATGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	8763676	8751857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8756214_8756290_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8763573
ENSMUSG00000003680.17_7	chr19	-	2218	12	FSM	ENSMUSG00000003680.17	ENSMUST00000176496.8	2224	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCCGGAAGTGACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	8763781	8751865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8752655_8752753_8752883_8755450_8755584_8755876_8756098_8759364_8759460_8759719_8759771_8759907_8760059_8760667_8760755_8761198_8761359_8762485_8762543_8762996_8763192_8763631
ENSMUSG00000003721.15_0	chr1	-	2681	6	FSM	ENSMUSG00000003721.15	ENSMUST00000003818.14	2697	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCATGTGTTAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	121255744	121232088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_121233677_121234592_121234693_121234868_121235036_121239929_121240055_121247325_121247702_121255419
ENSMUSG00000003731.14_0	chr4	-	642	2	FSM	ENSMUSG00000003731.14	ENST00000515055.1	664	2	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCTAAATTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129541935	129537783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129537966_129541475
ENSMUSG00000003731.14_1	chr4	-	5704	14	FSM	ENSMUSG00000003731.14	ENSMUST00000102590.11	5710	14	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAATTGTCTTCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	129566560	129537778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129541973_129542990_129543170_129544476_129544605_129545380_129545507_129547230_129547310_129547634_129547799_129548080_129548181_129548657_129548747_129549222_129549355_129550100_129550196_129551181_129551282_129551560_129551654_129555098_129555233_129566469
ENSMUSG00000003752.10_0	chr7	-	3204	7	FSM	ENSMUSG00000003752.10	ENSMUST00000003850.8	3247	7	23	20	23	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACAGGACAAAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	26928030	26906616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26907870_26911736_26911809_26912384_26912487_26913800_26914006_26916376_26916591_26919024_26919128_26926775
ENSMUSG00000003762.14_0	chr7	+	1696	15	FSM	ENSMUSG00000003762.14	ENST00000679130.1	1704	15	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGGGACCTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26931475	26956947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26931570_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003762.14_16	chr7	+	2171	15	FSM	ENSMUSG00000003762.14	ENSMUST00000003860.13	2181	15	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTTCTCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	26932456	26957374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26932599_26932889_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003762.14_23	chr7	+	1602	14	FSM	ENSMUSG00000003762.14	ENSMUST00000108378.10	2276	14	252	422	-234	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGGGACCTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26932889	26956947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26932998_26933126_26933247_26933365_26933433_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003762.14_26	chr7	+	1415	12	FSM	ENSMUSG00000003762.14	ENST00000677517.1	1424	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTAGGGACCTCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	26933138	26956947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26933247_26936802_26936881_26939221_26939345_26939464_26939551_26941403_26941545_26941636_26941719_26942727_26942822_26949711_26949854_26949960_26950069_26951685_26951752_26956036_26956124_26956647
ENSMUSG00000003778.15_0	chr18	-	4461	22	FSM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTGAAATGAACTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34757653	34731673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003778.15_1	chr18	-	4393	21	ISM	ENSMUSG00000003778.15	ENSMUST00000003876.10	4468	22	1055	6	1055	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTGAAATGAACTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34756599	34731673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ENSMUSG00000003778.15_10	chr18	-	2989	21	FSM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACCTGTGAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34757648	34732921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003778.15_11	chr18	-	2927	20	ISM	ENSMUSG00000003778.15	ENSMUST00000097626.10	3005	21	1054	10	1054	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACCTGTGAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34756600	34732921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ENSMUSG00000003778.15_15	chr18	-	3869	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	34757654	34734227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003778.15_16	chr18	-	3803	20	ISM	ENSMUSG00000003778.15	ENSMUST00000115765.2	3869	21	1052	0	1052	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	34756602	34734227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34741470_34741681_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ENSMUSG00000003778.15_2	chr18	-	4250	21	FSM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTGAAATGAACTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34757652	34731673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507_34756605_34757590
ENSMUSG00000003778.15_4	chr18	-	4182	20	ISM	ENSMUSG00000003778.15	ENSMUST00000115766.8	4258	21	1056	6	1056	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGTGAAATGAACTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34756598	34731673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_34733295_34735255_34735301_34735724_34735830_34736759_34736938_34737650_34737720_34737883_34737977_34738526_34738742_34739472_34739520_34739727_34739822_34740091_34740545_34740827_34741109_34742857_34743003_34743462_34743682_34744184_34744322_34746089_34746155_34746268_34746350_34747500_34747624_34747800_34747851_34749717_34749788_34756507
ENSMUSG00000003779.17_0	chr18	+	3126	19	FSM	ENSMUSG00000003779.17	ENSMUST00000167161.9	3146	19	6	14	6	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATATAAAAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	34757671	34765874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34757906_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_33	chr18	+	3099	19	FSM	ENSMUSG00000003779.17	ENSMUST00000166044.3	3107	19	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGATTCCAAATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	34758092	34765857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34758317_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_38	chr18	+	2696	17	FSM	ENSMUSG00000003779.17	ENST00000508792.5	2711	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATACACCCAGAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34758518	34765745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34758729_34759947_34760068_34760605_34760749_34760844_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003779.17_8	chr18	+	3656	19	FSM	ENSMUSG00000003779.17	ENSMUST00000237407.2	3674	19	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTCCATAATGTCCACG	NA	NA	NA	NA	NA	NA	NA	NA	34757797	34766322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34758114_34758510_34758695_34759768_34759859_34759947_34760068_34760605_34760745_34760837_34761026_34761105_34761236_34761437_34761633_34761727_34761840_34761937_34762007_34762193_34762338_34762477_34762644_34763054_34763220_34763339_34763480_34763574_34763678_34764198_34764395_34764573_34764666_34764978_34765117_34765353
ENSMUSG00000003808.19_0	chr8	+	1811	13	FSM	ENSMUSG00000003808.19	ENSMUST00000003906.13	1826	13	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCTGTTGTCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	85583628	85595882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590686_85590780_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003808.19_14	chr8	+	1547	12	FSM	ENSMUSG00000003808.19	ENST00000423140.6	1560	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGGGGCAGGGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85583655	85595738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85583811_85587534_85587673_85587755_85587855_85587940_85588060_85590859_85590989_85591065_85591182_85594005_85594091_85594177_85594278_85594378_85594548_85594637_85594716_85594852_85594968_85595494
ENSMUSG00000003809.15_0	chr8	-	2135	11	FSM	ENSMUSG00000003809.15	ENSMUST00000003907.14	2167	11	18	14	18	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAACATGGACAATA	NA	NA	NA	NA	NA	NA	NA	NA	85620528	85613035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183
ENSMUSG00000003809.15_2	chr8	-	2094	12	FSM	ENSMUSG00000003809.15	ENSMUST00000109745.8	2114	12	9	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACATGGACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	85620541	85613032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85613683_85615155_85615317_85615890_85616017_85616210_85616315_85617339_85617557_85617641_85617772_85619030_85619202_85619459_85619523_85619649_85619794_85620076_85620104_85620183_85620314_85620370
ENSMUSG00000003810.14_0	chr4	-	5157	26	FSM	ENSMUSG00000003810.14	ENSMUST00000239239.2	5188	26	25	6	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116228904	116163964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116228673
ENSMUSG00000003810.14_1	chr4	-	5381	28	FSM	ENSMUSG00000003810.14	ENSMUST00000239177.2	5406	28	19	6	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116228912	116163964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116225932_116226128_116228673
ENSMUSG00000003810.14_2	chr4	-	5439	29	FSM	ENSMUSG00000003810.14	ENSMUST00000003908.11	5445	29	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116321119	116163964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116165535_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640_116292789_116320932
ENSMUSG00000003810.14_4	chr4	-	5267	29	ISM	ENSMUSG00000003810.14	ENSMUST00000106484.8	5292	30	28163	6	28163	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATCTTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116292785	116163964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_116165532_116165843_116166038_116166121_116166259_116166700_116166824_116167012_116167240_116167653_116167849_116167944_116168220_116168410_116168566_116168875_116168986_116169124_116169248_116169487_116169590_116170049_116170216_116170889_116171023_116172003_116172143_116173019_116173229_116173659_116173746_116174173_116174236_116174905_116175039_116176955_116177058_116179460_116179671_116183269_116183346_116184805_116184961_116187587_116187667_116190609_116190631_116194618_116194695_116210169_116210262_116248799_116248832_116287602_116287746_116292640
ENSMUSG00000003812.14_0	chr8	+	1692	6	FSM	ENSMUSG00000003812.14	ENSMUST00000003910.13	1715	6	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACTAGTTTTGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	85635203	85638090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85635500_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUSG00000003812.14_1	chr8	+	1953	6	FSM	ENSMUSG00000003812.14	ENSMUST00000109744.8	1958	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCACTGGTAACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85635188	85638332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85635504_85635613_85635792_85635885_85635965_85636154_85636320_85636400_85636599_85637314
ENSMUSG00000003813.16_0	chr8	-	2062	9	FSM	ENSMUSG00000003813.16	ENSMUST00000003911.13	2074	9	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCATCTGCTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85567258	85561280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85562304_85562383_85562549_85564088_85564220_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000003813.16_1	chr8	-	1824	9	FSM	ENSMUSG00000003813.16	ENSMUST00000109761.9	1842	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTACTGGAGCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85567283	85561546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85562304_85562383_85562549_85564088_85564223_85564317_85564397_85564635_85564764_85564901_85564958_85565097_85565280_85565422_85565585_85567122
ENSMUSG00000003814.9_0	chr8	-	2169	9	FSM	ENSMUSG00000003814.9	ENSMUST00000003912.7	2184	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAATATTAGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	85573553	85568483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003814.9_9	chr8	-	1586	10	FSM	ENSMUSG00000003814.9	ENST00000586760.2	1600	10	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGGGGCAGCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	85573483	85568808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85569242_85569429_85569474_85569572_85569666_85570693_85570838_85571006_85571121_85571202_85571413_85571499_85571595_85572490_85572695_85572878_85572981_85573336
ENSMUSG00000003824.13_0	chr8	+	1674	5	FSM	ENSMUSG00000003824.13	ENSMUST00000136026.8	1686	5	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATACAAATAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	85598740	85614839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85598883_85599348_85599462_85610059_85610214_85612563_85612753_85613763
ENSMUSG00000003847.17_0	chr8	+	13356	15	FSM	ENSMUSG00000003847.17	ENSMUST00000169453.8	13380	15	23	1	-16	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGTGGCAATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108020124	108106147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108020531_108022212_108022267_108051270_108051397_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ENSMUSG00000003847.17_3	chr8	+	5899	14	FSM	ENSMUSG00000003847.17	ENSMUST00000125721.8	5899	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGATAAATAGCAGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	108020190	108098810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108020531_108051270_108051397_108065440_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ENSMUSG00000003847.17_4	chr8	+	12756	12	FSM	ENSMUSG00000003847.17	ENSMUST00000077440.13	12773	12	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGGCAATCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108065455	108106148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108066000_108071417_108071611_108074298_108074490_108078058_108078232_108082146_108082282_108082401_108082455_108085265_108085399_108088375_108088457_108092810_108092960_108093680_108096184_108097049_108097292_108097789
ENSMUSG00000003848.15_0	chr8	-	1645	9	FSM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTAAATTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108151676	108139128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369_108151503_108151597
ENSMUSG00000003848.15_1	chr8	-	1569	8	ISM	ENSMUSG00000003848.15	ENSMUST00000003946.9	1658	9	176	8	176	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTAAATTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108151505	108139128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_108139816_108142737_108142883_108143625_108143724_108144687_108144859_108144945_108145075_108145331_108145404_108148113_108148245_108151369
ENSMUSG00000003849.9_0	chr8	-	1537	6	FSM	ENSMUSG00000003849.9	ENSMUST00000003947.9	1553	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATCAGATGGTGGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	108129829	108114863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108115757_108117676_108117779_108118753_108118868_108119272_108119404_108119479_108119645_108129697
ENSMUSG00000003849.9_1	chr8	-	1125	4	FSM	ENSMUSG00000003849.9	ENST00000379047.7	1144	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACTGTGCAGTGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	108119629	108115026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108115757_108118753_108118868_108119272_108119404_108119479
ENSMUSG00000003849.9_3	chr8	-	575	3	FSM	ENSMUSG00000003849.9	ENST00000439109.6	598	3	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCTAGAAAATAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	108119632	108115465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108115757_108119272_108119404_108119479
ENSMUSG00000003865.17_0	chr7	+	3655	16	FSM	ENSMUSG00000003865.17	ENSMUST00000003964.17	3678	16	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCCAACTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	45084279	45106032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45084595_45085955_45086138_45087525_45087718_45088902_45089089_45089328_45089474_45091846_45091965_45092339_45092461_45092951_45093059_45094055_45094116_45094202_45094282_45097321_45097436_45097676_45097804_45100986_45101083_45101174_45101339_45104245_45104327_45104464
ENSMUSG00000003868.15_0	chr7	-	2303	18	FSM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGGAGGTGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45087517	45071189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304_45084762_45085890_45085976_45087455
ENSMUSG00000003868.15_1	chr7	-	2238	17	ISM	ENSMUSG00000003868.15	ENSMUST00000211214.2	2312	18	1548	6	1548	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGGGGAGGTGGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	45085972	45071189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675_45083781_45084304_45084762_45085890
ENSMUSG00000003868.15_11	chr7	-	1815	15	FSM	ENSMUSG00000003868.15	ENSMUST00000107771.12	1834	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGACCTCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45084035	45071328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45071430_45071515_45071631_45071808_45071939_45072111_45072232_45073502_45073622_45073706_45073802_45074105_45074230_45074374_45074469_45074567_45074675_45077902_45077970_45078076_45078207_45078877_45079020_45079332_45079389_45080743_45080799_45083675
ENSMUSG00000003872.10_0	chr7	-	532	5	FSM	ENSMUSG00000003872.10	ENST00000391864.7	544	5	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTCACCGAGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45020022	45017322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45017423_45017727_45017892_45019338_45019411_45019550_45019670_45019945
ENSMUSG00000003872.10_1	chr7	-	455	4	ISM	ENSMUSG00000003872.10	ENST00000391864.7	544	5	358	7	339	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCACCGAGTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	45019668	45017321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45017423_45017727_45017892_45019338_45019411_45019550
ENSMUSG00000003873.12_0	chr7	-	854	6	FSM	ENSMUSG00000003873.12	ENSMUST00000033093.10	867	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATGGTCCCTTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	45116313	45111124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUSG00000003873.12_1	chr7	-	791	6	FSM	ENSMUSG00000003873.12	ENSMUST00000211365.2	801	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATGGTCCCTTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	45116254	45111124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45111387_45112822_45112928_45114612_45114749_45115400_45115548_45115643_45115696_45116165
ENSMUSG00000003873.12_11	chr7	-	242	2	ISM	ENSMUSG00000003873.12	ENST00000539787.2	293	3	1462	6	1462	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTAGCTATACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45114737	45112810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45112928_45114612
ENSMUSG00000003873.12_12	chr7	-	287	3	FSM	ENSMUSG00000003873.12	ENST00000539787.2	293	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTAGCTATACTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45112810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45112928_45114612_45114749_45116165
ENSMUSG00000003873.12_8	chr7	-	431	5	FSM	ENSMUSG00000003873.12	ENST00000354470.7	433	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCCCACTGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	45116199	45111286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115643_45115696_45116165
ENSMUSG00000003873.12_9	chr7	-	393	4	ISM	ENSMUSG00000003873.12	ENST00000354470.7	433	5	508	2	508	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTCCCACTGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	45115691	45111286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45111391_45112822_45112928_45114612_45114749_45115643
ENSMUSG00000003923.15_0	chr10	-	4141	7	FSM	ENSMUSG00000003923.15	ENSMUST00000092430.11	4167	7	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTTGAAACCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71074093	71061302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_71064530_71064916_71064974_71069186_71069283_71070694_71070845_71071372_71071444_71072745_71072862_71073669
ENSMUSG00000003929.12_0	chr17	-	6612	4	FSM	ENSMUSG00000003929.12	ENSMUST00000054072.9	6639	4	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCTGTTGGTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	33577830	33548320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33554628_33555428_33555484_33555695_33555823_33577707
ENSMUSG00000003948.18_0	chr11	+	2663	7	FSM	ENSMUSG00000003948.18	ENSMUST00000004050.7	2677	7	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATATGGCTGAGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	90140312	90169412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_90140562_90148345_90148428_90150652_90150814_90155328_90155404_90156870_90156973_90158337_90158408_90167488
ENSMUSG00000003949.17_0	chr11	-	3054	4	FSM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGATGTTTTCCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	90280510	90229392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90231801_90236583_90236805_90278611_90278948_90280421
ENSMUSG00000003949.17_1	chr11	-	2963	3	ISM	ENSMUSG00000003949.17	ENST00000573945.5	3066	4	1569	8	1569	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGGATGTTTTCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	90278948	90229395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_90231801_90236583_90236805_90278611
ENSMUSG00000003955.9_0	chr16	-	651	4	ISM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	18970	-73	18970	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTCCAAGTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	35872769	35864142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655
ENSMUSG00000003955.9_1	chr16	-	706	5	FSM	ENSMUSG00000003955.9	ENSMUST00000004057.9	718	5	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTCCAAGTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	35891885	35864142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891839
ENSMUSG00000003955.9_5	chr16	-	634	5	FSM	ENSMUSG00000003955.9	ENSMUST00000231351.2	640	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATGACTTGTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35891739	35864221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35864462_35866748_35866858_35870211_35870321_35872655_35872779_35891686
ENSMUSG00000003970.10_0	chr15	+	849	6	FSM	ENSMUSG00000003970.10	ENSMUST00000004072.10	851	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	9096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76788277	76790512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76788310_76788502_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUSG00000003970.10_6	chr15	+	813	5	FSM	ENSMUSG00000003970.10	ENSMUST00000229183.2	1020	5	205	2	205	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	10704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCGGCGTGTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76788506	76790512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76788651_76788738_76788881_76789017_76789237_76790055_76790172_76790320
ENSMUSG00000003974.7_0	chr5	-	1766	4	FSM	ENSMUSG00000003974.7	ENST00000439827.1	1779	4	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATATGGAAACAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	9640175	9535706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_9535842_9554724_9554900_9619918_9620775_9639575
ENSMUSG00000003992.16_0	chr13	+	3924	17	FSM	ENSMUSG00000003992.16	ENSMUST00000004094.15	3957	17	13	20	13	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTGTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91609181	91851528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_12	chr13	+	1464	15	FSM	ENSMUSG00000003992.16	ENST00000509053.5	1475	15	2	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTTGCCCGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91609301	91849377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91848784
ENSMUSG00000003992.16_14	chr13	+	1500	16	FSM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGAACTCAGATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	91609302	91849285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_20	chr13	+	887	14	FSM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAGTAATGCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	91609306	91841175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149
ENSMUSG00000003992.16_27	chr13	+	1431	15	ISM	ENSMUSG00000003992.16	ENST00000505980.5	1504	16	63406	3	63401	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGTGAACTCAGATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	91672706	91849284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_91672777_91687453_91687516_91712728_91712814_91790420_91790511_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000003992.16_29	chr13	+	818	13	ISM	ENSMUSG00000003992.16	ENST00000401636.1	891	14	63406	3	63406	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAGTAATGCTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	91672711	91841175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823152_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149
ENSMUSG00000003992.16_6	chr13	+	1616	16	FSM	ENSMUSG00000003992.16	ENSMUST00000042122.15	1633	16	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAGAGCTTTCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	91609220	91849349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91609368_91672703_91672777_91687453_91687516_91712728_91712814_91812236_91812297_91817794_91817862_91818512_91818584_91823176_91823245_91828708_91828758_91831800_91831837_91833329_91833385_91836914_91836986_91838978_91839058_91841149_91841179_91842137_91842237_91848784
ENSMUSG00000004018.10_0	chr11	+	2707	14	FSM	ENSMUSG00000004018.10	ENSMUST00000004120.9	2724	14	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCAAGCAAGTCTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	26336142	26421867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_26337311_26347745_26347805_26349648_26349710_26353321_26353379_26357547_26357649_26372407_26372505_26384431_26384501_26409685_26409837_26418334_26418419_26418671_26418718_26418800_26418883_26419651_26419769_26420876_26420949_26421324
ENSMUSG00000004032.11_0	chr3	+	931	8	FSM	ENSMUSG00000004032.11	ENSMUST00000004134.11	945	8	9	5	9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTGGTGTCTAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	107803145	107805997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107803315_107803613_107803690_107803941_107804007_107804603_107804686_107804777_107804879_107805282_107805379_107805481_107805593_107805766
ENSMUSG00000004035.13_0	chr3	-	1371	8	FSM	ENSMUSG00000004035.13	ENSMUST00000004137.11	1377	8	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTTTTCTTTGGTCG	NA	NA	NA	NA	NA	NA	NA	NA	107839128	107833650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107834297_107836185_107836297_107836378_107836475_107837589_107837691_107837788_107837871_107838143_107838209_107838630_107838707_107838934
ENSMUSG00000004040.17_0	chr11	-	6024	24	FSM	ENSMUSG00000004040.17	ENSMUST00000103114.8	6042	24	14	4	-10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGTACAAAATATAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	100830216	100775927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100779587_100780303_100780367_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004040.17_7	chr11	-	4495	24	FSM	ENSMUSG00000004040.17	ENSMUST00000127638.8	4516	24	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTCTGGCAGTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	100830352	100777642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783899_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004040.17_9	chr11	-	2917	24	FSM	ENSMUSG00000004040.17	ENSMUST00000092671.12	2927	24	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTAAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	100830201	100779066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100779587_100780303_100780417_100780711_100780755_100783902_100784113_100784490_100784631_100784716_100784812_100784989_100785043_100785526_100785663_100785889_100785989_100787148_100787233_100789276_100789325_100789433_100789528_100789619_100789650_100793562_100793623_100794247_100794341_100794429_100794589_100795732_100795885_100796029_100796125_100796418_100796501_100796658_100796755_100798816_100798916_100799485_100799631_100802059_100802211_100830081
ENSMUSG00000004043.15_0	chr11	+	3874	20	FSM	ENSMUSG00000004043.15	ENSMUST00000004145.14	3888	20	7	7	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	100750183	100775988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100750407_100751309_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ENSMUSG00000004043.15_16	chr11	+	2198	17	FSM	ENSMUSG00000004043.15	ENST00000590726.7	2211	17	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACCCAAGTAGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	100751285	100772982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100751403_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004043.15_3	chr11	+	3728	20	FSM	ENSMUSG00000004043.15	ENSMUST00000107356.8	3738	20	3	7	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTACCAGTCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	100750484	100775988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100750562_100751309_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767891_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887_100772993_100774659
ENSMUSG00000004043.15_8	chr11	+	2355	18	FSM	ENSMUSG00000004043.15	ENST00000677893.1	2371	18	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACCCAAGTAGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	100751260	100772982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100751403_100752153_100752292_100752546_100752704_100753956_100754047_100756156_100756332_100764828_100764960_100765164_100765317_100765748_100765905_100766308_100766489_100767602_100767691_100767767_100767885_100770104_100770198_100770436_100770644_100771102_100771198_100771293_100771425_100771855_100772012_100772563_100772616_100772887
ENSMUSG00000004044.10_0	chr11	-	3474	2	FSM	ENSMUSG00000004044.10	ENSMUST00000060792.6	3491	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGATTTGTGTGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	100861703	100847565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100850152_100860815
ENSMUSG00000004054.10_0	chr19	+	3882	12	FSM	ENSMUSG00000004054.10	ENSMUST00000004156.10	3898	12	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTAATGTCACCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5739077	5752890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5739295_5739504_5739541_5739716_5741017_5745188_5745370_5745524_5745674_5745759_5745936_5746034_5746279_5746711_5746826_5747371_5747508_5747585_5747678_5750617_5750999_5752034
ENSMUSG00000004056.16_0	chr7	+	4531	14	FSM	ENSMUSG00000004056.16	ENSMUST00000108344.9	4544	14	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCTGTGCTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	27290984	27340246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_11	chr7	+	3099	15	FSM	ENSMUSG00000004056.16	ENSMUST00000108343.8	3122	15	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGACCAGGGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	27305256	27338865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27305363_27306667_27306831_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_12	chr7	+	2912	14	FSM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	3	8	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	27305285	27338870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27305363_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_13	chr7	+	2839	13	ISM	ENSMUSG00000004056.16	ENSMUST00000051356.12	2923	14	2763	6	-41	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGGCCCAGTCCACATT	NA	NA	NA	NA	NA	NA	NA	NA	27308045	27338872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486
ENSMUSG00000004056.16_7	chr7	+	2845	15	FSM	ENSMUSG00000004056.16	ENSMUST00000167435.8	2865	15	15	5	15	-3	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGGGCCCAGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	27291185	27338870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27291305_27308047_27308179_27315665_27315795_27317632_27317745_27328261_27328416_27328720_27328853_27331842_27331909_27332623_27332693_27333986_27334110_27335463_27335593_27335688_27335904_27336347_27336436_27336516_27336620_27337486_27338705_27338813
ENSMUSG00000004069.18_0	chr16	+	2625	12	FSM	ENSMUSG00000004069.18	ENSMUST00000060067.12	2648	12	9	14	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAATCAAAATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4501942	4525545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4523707_4523825_4524431
ENSMUSG00000004069.18_2	chr16	+	2478	11	FSM	ENSMUSG00000004069.18	ENSMUST00000115854.4	2505	11	13	14	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAATCAAAATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4501972	4525545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4502209_4505100_4505235_4507844_4507929_4511075_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004069.18_7	chr16	+	2113	9	FSM	ENSMUSG00000004069.18	ENST00000431375.6	2139	9	11	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGATATTTAAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	4501981	4525538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4502209_4511206_4511277_4512227_4512381_4514252_4514401_4515114_4515180_4517612_4517742_4519032_4519149_4520074_4520173_4524431
ENSMUSG00000004070.16_0	chr16	+	1715	6	FSM	ENSMUSG00000004070.16	ENSMUST00000004172.15	1730	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTTGGACCTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	4544235	4584600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4544336_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_4	chr16	+	1269	6	FSM	ENSMUSG00000004070.16	ENSMUST00000120232.8	1287	6	8	10	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACTAGAGCCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	4559452	4584103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4559604_4580422_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004070.16_7	chr16	+	1621	5	ISM	ENSMUSG00000004070.16	ENSMUST00000118885.8	1392	6	5655	-496	5655	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCTGTGATTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	4580421	4584605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_4580542_4581592_4581711_4582469_4582962_4583626_4583754_4583841
ENSMUSG00000004071.14_0	chr16	-	3940	6	FSM	ENSMUSG00000004071.14	ENSMUST00000004173.12	3953	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTTGGCTCTATACT	NA	NA	NA	NA	NA	NA	NA	NA	4607841	4583324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4607694
ENSMUSG00000004071.14_2	chr16	-	2543	6	FSM	ENSMUSG00000004071.14	ENSMUST00000118703.8	2554	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCATATTTCTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	4608151	4584710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4586514_4586608_4586883_4587503_4587660_4587906_4588016_4588534_4588600_4608015
ENSMUSG00000004071.14_4	chr16	-	505	2	FSM	ENSMUSG00000004071.14	ENST00000564828.5	515	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTGCAATTCAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4587651	4586156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4586514_4587503
ENSMUSG00000004085.15_2	chr2	+	3311	20	FSM	ENSMUSG00000004085.15	ENSMUST00000090824.12	3334	20	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAATGTTGATTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	72115996	72272947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72240492_72240538_72242273_72242305_72242414_72242555_72246884_72246948_72248298_72248392_72263711_72263829_72265574_72265650_72268545_72268697_72271575
ENSMUSG00000004085.15_6	chr2	+	6648	12	FSM	ENSMUSG00000004085.15	ENSMUST00000135469.8	6663	12	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAATCCCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	72116078	72237838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_72116200_72128531_72128725_72185901_72185990_72194971_72195074_72198744_72198811_72202070_72202100_72202214_72202353_72208977_72209065_72214474_72214550_72219813_72219921_72228633_72228770_72232332
ENSMUSG00000004096.10_0	chr9	+	1097	7	FSM	ENSMUSG00000004096.10	ENSMUST00000004200.9	1111	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTTATACAGCTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	14411922	14421869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_14412078_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004096.10_8	chr9	+	813	7	FSM	ENSMUSG00000004096.10	ENSMUST00000213913.2	831	7	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAACTGTTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	14411945	14421646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_14412040_14413211_14413351_14414109_14414223_14414893_14414983_14416128_14416237_14419146_14419266_14421495
ENSMUSG00000004098.8_1	chr9	-	6096	67	FSM	ENSMUSG00000004098.8	ENSMUST00000004201.8	6119	67	23	0	23	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTTTCTCTTTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	20726340	20681345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20682275_20682366_20682607_20682882_20682952_20683403_20683517_20683600_20683800_20684380_20684435_20685189_20685226_20685309_20685364_20685611_20685720_20685856_20685911_20686326_20686381_20686528_20686637_20686761_20686816_20687129_20687184_20687387_20687442_20687608_20687663_20688287_20688396_20689772_20689827_20689960_20690015_20690096_20690151_20690311_20690366_20691196_20691305_20693103_20693158_20693782_20693837_20693920_20694029_20694779_20694888_20695964_20696019_20696441_20696532_20696668_20696777_20696868_20696923_20697494_20697549_20697646_20697701_20698385_20698431_20698556_20698611_20698826_20698872_20699846_20699901_20703940_20703995_20704805_20704914_20705006_20705061_20705242_20705288_20706952_20707007_20707105_20707151_20707245_20707300_20708517_20708563_20708678_20708733_20708869_20708915_20709713_20709768_20709884_20709930_20710331_20710386_20710555_20710610_20710704_20710759_20711538_20711593_20712363_20712418_20712511_20712569_20713062_20713147_20713239_20713315_20713753_20713817_20714302_20714345_20714415_20714464_20715932_20716074_20716165_20716280_20718900_20719051_20719655_20719761_20720735_20720893_20720960_20721151_20721235_20721398_20726161
ENSMUSG00000004099.17_0	chr9	-	5355	39	FSM	ENSMUSG00000004099.17	ENSMUST00000004202.17	5367	39	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCCAGCTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	20864268	20818509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20864003
ENSMUSG00000004099.17_1	chr9	-	5233	39	FSM	ENSMUSG00000004099.17	ENSMUST00000177754.9	5248	39	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCCAGCTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	20871174	20818509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20871028
ENSMUSG00000004099.17_2	chr9	-	5851	39	FSM	ENSMUSG00000004099.17	ENSMUST00000178110.3	5870	39	14	5	-4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCCAGCTAGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	20863905	20818509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851848_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ENSMUSG00000004099.17_23	chr9	-	5524	39	FSM	ENSMUSG00000004099.17	ENSMUST00000216540.2	5543	39	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAGTGCTCTCACCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	20863888	20818822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20818858_20819166_20819258_20819767_20820049_20820385_20820582_20820988_20821167_20821435_20821603_20822712_20822855_20823028_20823312_20823475_20823605_20823867_20823953_20825192_20825386_20827017_20827237_20828592_20828767_20829201_20829339_20829411_20829617_20829730_20829847_20831135_20831284_20831404_20831503_20833318_20833497_20833589_20833778_20834061_20834214_20834997_20835091_20835318_20835438_20837740_20837851_20837926_20838008_20838101_20838145_20838402_20838468_20840343_20840426_20841420_20841462_20843410_20843496_20845814_20845856_20847838_20847918_20848457_20848490_20849366_20849443_20851771_20851851_20852668_20852880_20852994_20853103_20853878_20853916_20863141
ENSMUSG00000004100.13_0	chr9	+	1656	11	FSM	ENSMUSG00000004100.13	ENSMUST00000004203.6	1670	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCTTTTTGAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	20799478	20803468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20799614_20799702_20799874_20800633_20800736_20800929_20800981_20801066_20801238_20801934_20802012_20802200_20802309_20802378_20802503_20802582_20802662_20802746_20803044_20803127
ENSMUSG00000004105.9_0	chr2	+	3321	5	FSM	ENSMUSG00000004105.9	ENSMUST00000004208.7	3339	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGGATACACCCACACTG	NA	NA	NA	NA	NA	NA	NA	NA	33106091	33137722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_33106466_33118186_33119045_33132211_33132406_33133690_33133962_33136098
ENSMUSG00000004110.18_0	chr1	-	7070	47	FSM	ENSMUSG00000004110.18	ENST00000357570.9	7084	47	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCATCCTCAGCGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	154601658	154274018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_154274682_154277728_154277920_154279423_154279605_154280630_154280760_154283457_154283570_154287809_154287917_154288188_154288290_154288796_154288905_154289721_154289828_154291806_154291904_154296773_154296902_154301582_154301749_154302271_154302364_154308176_154308243_154312163_154312290_154313012_154313097_154317240_154317352_154317877_154318043_154319546_154319749_154320617_154320756_154321245_154321407_154324591_154324689_154341446_154341572_154342691_154342752_154343429_154343560_154344691_154344855_154347083_154347398_154347805_154348460_154349602_154349660_154353511_154353610_154354996_154355065_154357297_154357416_154358296_154358370_154358820_154358953_154359262_154359376_154361408_154361522_154362243_154362454_154363789_154363880_154364530_154364585_154369047_154369164_154437476_154437581_154509299_154509482_154510585_154510739_154511502_154511607_154576116_154576257_154577020_154577127_154601396
ENSMUSG00000004113.19_0	chr2	-	6982	47	FSM	ENSMUSG00000004113.19	ENSMUST00000041342.12	6984	47	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCACCACGACCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	24653059	24496583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24497113_24497453_24497699_24497953_24498159_24499854_24499972_24500122_24500259_24506830_24506959_24507685_24507799_24508266_24508375_24512610_24512720_24515249_24515347_24521910_24522039_24525107_24525253_24527437_24527530_24528683_24528750_24529105_24529223_24538490_24538575_24538908_24539020_24540005_24540171_24540438_24540641_24541092_24541231_24542915_24543077_24544395_24544493_24546722_24546735_24547302_24547410_24548502_24548563_24548876_24549007_24551765_24551893_24567833_24568052_24568887_24569656_24575779_24575887_24577711_24577780_24580752_24580871_24587286_24587360_24587584_24587717_24589937_24590051_24592519_24592633_24596146_24596357_24608041_24608132_24609056_24609114_24609952_24610069_24611319_24611424_24620682_24620874_24622207_24622361_24623956_24624049_24648293_24648434_24651787_24651894_24652775
ENSMUSG00000004113.19_1	chr2	-	6962	46	NIC	ENSMUSG00000004113.19	novel	9736	47	NA	NA	8	-2	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGCACCACGACCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	24653051	24496583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_24497113_24497453_24497699_24497953_24498159_24499854_24499972_24500122_24500259_24506830_24506959_24507685_24507799_24508266_24508375_24512610_24512720_24515249_24515347_24521910_24522039_24525107_24525253_24527437_24527530_24528683_24528750_24529105_24529223_24538490_24538575_24538908_24539020_24540005_24540171_24540438_24540641_24541092_24541231_24542915_24543077_24544395_24544493_24547302_24547410_24548502_24548563_24548876_24549007_24551765_24551893_24567833_24568052_24568887_24569656_24575779_24575887_24577711_24577780_24580752_24580871_24587286_24587360_24587584_24587717_24589937_24590051_24592519_24592633_24596146_24596357_24608041_24608132_24609056_24609114_24609952_24610069_24611319_24611424_24620682_24620874_24622207_24622361_24623956_24624049_24648293_24648434_24651787_24651894_24652775
ENSMUSG00000004127.13_0	chr3	+	4001	8	FSM	ENSMUSG00000004127.13	ENSMUST00000040321.13	4025	8	11	13	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGACCAAATCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	137849219	137865569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137849358_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUSG00000004127.13_4	chr3	+	4053	8	FSM	ENSMUSG00000004127.13	ENSMUST00000162864.8	4064	8	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGACCAAATCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	137849278	137865569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137849469_137853135_137853332_137854114_137854275_137855214_137855287_137856163_137856239_137857952_137858103_137860453_137860560_137862465
ENSMUSG00000004151.18_0	chr12	+	6557	13	FSM	ENSMUSG00000004151.18	ENSMUST00000095767.11	6576	13	6	13	6	-13	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATTGAAAATATTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	38830086	38920470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ENSMUSG00000004151.18_1	chr12	+	6539	13	NNC	ENSMUSG00000004151.18	novel	6576	13	NA	NA	25	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAAAATATTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38830105	38920472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_38830421_38830846_38830979_38831797_38831886_38833236_38833285_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902287_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ENSMUSG00000004151.18_3	chr12	+	3956	10	FSM	ENSMUSG00000004151.18	ENSMUST00000159334.8	3981	10	14	11	14	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCATAAAGTGTAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	38833521	38918191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_38833802_38843169_38843224_38877776_38877907_38881079_38881269_38885067_38885316_38902218_38902288_38904158_38904228_38906939_38907110_38911285_38911388_38915546
ENSMUSG00000004207.15_0	chr10	+	2634	14	FSM	ENSMUSG00000004207.15	ENSMUST00000105465.8	2646	14	8	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACAGATCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	60113456	60138369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_16	chr10	+	2551	14	FSM	ENSMUSG00000004207.15	ENSMUST00000165878.2	2564	14	6	7	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACAGATCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	60120288	60138369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_60120354_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131783_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004207.15_6	chr10	+	2640	14	NIC	ENSMUSG00000004207.15	novel	2657	15	NA	NA	5	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAACAGATCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	60113454	60138369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_+_60113605_60127420_60127555_60128284_60128360_60129128_60129255_60130312_60130511_60130744_60130889_60131725_60131787_60134876_60135009_60135242_60135339_60135557_60135838_60135926_60136085_60136316_60136398_60136552_60136661_60137472
ENSMUSG00000004221.17_0	chrX	+	6763	10	FSM	ENSMUSG00000004221.17	ENSMUST00000164101.8	6788	10	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAAGCCCTGCAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73436917	73497380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73437012_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004221.17_1	chrX	+	6977	11	FSM	ENSMUSG00000004221.17	ENSMUST00000114133.9	6994	11	14	3	-7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAATTTTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	73468231	73497457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73468322_73471367_73471509_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004221.17_10	chrX	+	982	7	FSM	ENSMUSG00000004221.17	ENST00000611176.4	997	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAGTACTATGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	73476429	73491984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73476613_73477408_73477621_73480769_73480889_73483480_73483582_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004221.17_6	chrX	+	3313	10	FSM	ENSMUSG00000004221.17	ENSMUST00000114127.8	3332	10	17	2	-16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATGGGGGTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	73473293	73493890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480769_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004221.17_8	chrX	+	4515	10	FSM	ENSMUSG00000004221.17	ENSMUST00000064407.10	4530	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAAGCATGCACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73473319	73495121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73473428_73476410_73476613_73477408_73477621_73480772_73480889_73482512_73482666_73483480_73483557_73486950_73487095_73487377_73487521_73491464_73491527_73491822
ENSMUSG00000004231.16_0	chr19	+	3048	10	FSM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	5	9	5	6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATCCGAAAAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44745796	44826296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44745876_44749316_44749483_44750126_44750325_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004231.16_3	chr19	+	2969	9	ISM	ENSMUSG00000004231.16	ENST00000361791.7	3062	10	3525	9	3484	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATCCGAAAAGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44749316	44826296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_44749483_44750126_44750325_44777215_44777302_44779121_44779242_44804346_44804523_44806864_44806992_44821604_44821707_44823829_44823917_44824389
ENSMUSG00000004233.15_0	chr3	+	4404	6	FSM	ENSMUSG00000004233.15	ENSMUST00000004343.7	4410	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAGTAAAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99048389	99127519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_99048505_99094796_99095055_99111851_99111933_99112540_99112627_99121971_99122091_99123774
ENSMUSG00000004263.16_0	chr6	-	4422	10	FSM	ENSMUSG00000004263.16	ENSMUST00000088357.12	4433	10	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATATGTCTGTGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	124733481	124719511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124733258
ENSMUSG00000004264.18_1	chr6	+	819	4	FSM	ENSMUSG00000004264.18	ENST00000546111.5	839	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACTTAAAGCCAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	124689196	124693895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124689527_124689666_124689752_124692916_124692994_124693568
ENSMUSG00000004264.18_13	chr6	+	1291	9	NIC	ENSMUSG00000004264.18	novel	1318	10	NA	NA	10	-2	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCAAAAATTTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	124689308	124693902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124692916_124692994_124693568
ENSMUSG00000004264.18_2	chr6	+	1497	8	FSM	ENSMUSG00000004264.18	ENST00000399433.7	1517	8	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACTTAAAGCCAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	124689254	124693895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692554_124692623_124692916_124692994_124693295
ENSMUSG00000004264.18_56	chr6	+	1077	8	FSM	ENSMUSG00000004264.18	ENST00000542912.5	1086	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGGGTGGGACAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	124689327	124693790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124689527_124689666_124689752_124690024_124690105_124690946_124691132_124691792_124691923_124692022_124692127_124692544_124692623_124693574
ENSMUSG00000004266.16_0	chr6	-	2217	16	FSM	ENSMUSG00000004266.16	ENSMUST00000112484.10	2219	16	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTGTGCCCCTTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	124710115	124697669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124697872_124698042_124698186_124698538_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUSG00000004266.16_1	chr6	-	2152	15	FSM	ENSMUSG00000004266.16	ENST00000456013.5	2168	15	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTGCGGCCCCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124710145	124698045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124698292_124698534_124698631_124698725_124698878_124698973_124699042_124701919_124702075_124702189_124702322_124704347_124704498_124704678_124704759_124705074_124705172_124705299_124705414_124705510_124705628_124705743_124705934_124709262_124709458_124709700_124709824_124709908
ENSMUSG00000004267.17_1	chr6	-	2368	10	FSM	ENSMUSG00000004267.17	ENSMUST00000112476.8	2386	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACACTTGGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124746573	124737024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUSG00000004267.17_2	chr6	-	2784	12	FSM	ENSMUSG00000004267.17	ENSMUST00000004378.15	2795	12	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACACTTGGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124746632	124737024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124738326_124738610_124738670_124739615_124739725_124739967_124740170_124740689_124740888_124743067_124743291_124743493_124743628_124743995_124744066_124744502_124744562_124744663_124744760_124745200_124745301_124746399
ENSMUSG00000004268.12_0	chr6	-	1025	6	FSM	ENSMUSG00000004268.12	ENSMUST00000004379.8	1034	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTCAGACCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	124689132	124681343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124681622_124681901_124682052_124682120_124682180_124682477_124682620_124682703_124682806_124688838
ENSMUSG00000004270.14_0	chr6	+	2254	13	FSM	ENSMUSG00000004270.14	ENSMUST00000004381.14	2281	13	10	17	10	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAGGAAAAACAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	124639999	124681364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124640323_124675032_124675141_124676201_124676309_124676969_124677064_124677203_124677242_124677635_124677815_124678431_124678541_124679198_124679286_124679374_124679542_124679968_124680117_124680189_124680349_124680457_124680591_124680762
ENSMUSG00000004285.13_0	chr6	+	689	2	FSM	ENSMUSG00000004285.13	ENSMUST00000004396.13	703	2	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTACTGGTATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	29467727	29470508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29467974_29470065
ENSMUSG00000004317.15_0	chrX	-	8374	12	FSM	ENSMUSG00000004317.15	ENSMUST00000004428.14	8390	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATTCAAGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	7054944	7020055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7054770
ENSMUSG00000004317.15_2	chrX	-	3093	12	FSM	ENSMUSG00000004317.15	ENST00000307367.2	3103	12	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTTACCTTCTCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	7052913	7025400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7026059_7027474_7027692_7027836_7028236_7029568_7029756_7031818_7032362_7032594_7032676_7036547_7036755_7037382_7037506_7044539_7044728_7050029_7050130_7052422_7052575_7052675
ENSMUSG00000004319.16_11	chr8	-	997	4	FSM	ENSMUSG00000004319.16	ENST00000423965.2	1013	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGATACTGGAATAATGA	NA	NA	NA	NA	NA	NA	NA	NA	61394443	61382089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61382646_61390333_61390522_61391581_61391682_61394290
ENSMUSG00000004319.16_5	chr8	-	2601	11	FSM	ENSMUSG00000004319.16	ENST00000360642.7	2609	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTACCTGGAACAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	61428935	61365903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61366210_61372373_61372591_61375823_61376223_61380265_61380453_61382104_61382651_61386114_61386322_61387518_61387642_61390333_61390522_61391581_61391682_61394290_61394449_61428765
ENSMUSG00000004328.16_0	chr7	-	1250	9	ISM	ENSMUSG00000004328.16	ENST00000472815.5	1313	10	4418	4	235	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTGAGAACCAGCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	16790369	16776516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790184
ENSMUSG00000004328.16_1	chr7	-	1310	10	FSM	ENSMUSG00000004328.16	ENST00000472815.5	1313	10	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGAGAACCAGCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	16794787	16776515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16776616_16778301_16778493_16778779_16778893_16782538_16782687_16782924_16783032_16784473_16784683_16785057_16785171_16785846_16785932_16790184_16790376_16794734
ENSMUSG00000004341.9_0	chr13	+	469	3	FSM	ENSMUSG00000004341.9	ENST00000474923.1	489	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2002	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAGGCTTTACAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	21497825	21503251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21497972_21501154_21501273_21503046
ENSMUSG00000004347.18_0	chr6	-	2234	19	FSM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGTGTCCCTTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	56339422	56049173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_56049361_56068347_56068417_56099976_56100055_56103843_56104066_56114329_56114506_56116375_56116497_56119078_56119161_56127580_56127702_56128276_56128379_56134007_56134137_56135911_56136013_56150587_56150729_56151892_56152010_56156077_56156145_56157053_56157237_56158668_56158783_56322110_56322138_56338729_56338833_56339328
ENSMUSG00000004347.18_1	chr6	-	2141	18	ISM	ENSMUSG00000004347.18	ENST00000321453.12	2248	19	595	8	463	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGTGTCCCTTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	56338833	56049173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_56049361_56068347_56068417_56099976_56100055_56103843_56104066_56114329_56114506_56116375_56116497_56119078_56119161_56127580_56127702_56128276_56128379_56134007_56134137_56135911_56136013_56150587_56150729_56151892_56152010_56156077_56156145_56157053_56157237_56158668_56158783_56322110_56322138_56338729
ENSMUSG00000004356.9_0	chr10	-	8809	62	FSM	ENSMUSG00000004356.9	ENSMUST00000004470.9	8821	62	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTACTCCTGCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	88662662	88582476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614084_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ENSMUSG00000004356.9_3	chr10	-	8537	62	FSM	ENSMUSG00000004356.9	ENST00000261637.5	8545	62	8	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTCAGCTGGTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88662663	88582751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88582922_88583137_88583284_88584087_88584215_88585121_88585404_88586513_88586586_88587206_88587395_88588768_88588902_88589497_88589630_88590338_88590522_88590612_88590683_88591049_88591130_88592886_88592998_88593718_88593851_88594165_88594337_88596731_88596849_88597604_88597747_88598630_88598798_88600535_88600704_88601272_88601372_88602924_88603082_88603314_88603455_88604496_88604787_88606233_88606317_88606546_88606687_88607723_88607862_88608289_88608431_88608713_88608870_88610533_88610687_88610786_88610838_88611070_88611215_88612025_88612114_88613266_88613412_88614082_88614309_88616809_88616890_88618434_88618579_88621851_88622061_88623316_88623484_88626912_88627039_88627545_88627632_88628460_88628552_88631238_88631428_88634142_88634384_88634545_88634626_88636978_88637056_88640384_88640544_88641997_88642061_88643188_88643340_88644943_88645050_88645576_88645666_88645791_88645948_88649778_88649958_88651730_88651809_88652739_88652875_88653040_88653188_88653727_88653884_88654350_88654489_88655129_88655212_88656688_88656878_88657601_88657735_88657865_88657933_88661279_88661361_88662467
ENSMUSG00000004360.10_0	chr10	+	5663	6	FSM	ENSMUSG00000004360.10	ENSMUST00000092627.6	5681	6	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTACTGTTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	29087610	29106766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_29087863_29094050_29094293_29097781_29098127_29098216_29098297_29100230_29101411_29103202
ENSMUSG00000004364.15_0	chr1	-	4692	16	FSM	ENSMUSG00000004364.15	ENSMUST00000163119.8	4709	16	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCAAGGATTCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	80318188	80242647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80300575_80300774_80317962
ENSMUSG00000004364.15_1	chr1	-	2421	15	FSM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTTCCCCAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	80318012	80244544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796_80281911_80317962
ENSMUSG00000004364.15_2	chr1	-	2372	14	ISM	ENSMUSG00000004364.15	ENSMUST00000164108.8	2442	15	36117	5	36117	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATTTCCCCAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	80281911	80244544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_80245005_80246926_80247073_80249240_80249428_80254130_80254266_80255091_80255189_80255680_80255806_80258549_80258658_80259099_80259271_80260339_80260517_80261392_80261539_80264615_80264845_80266460_80266576_80267798_80267960_80281796
ENSMUSG00000004383.19_0	chr8	-	3656	15	FSM	ENSMUSG00000004383.19	ENSMUST00000004497.11	3669	15	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTTTCTTCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74079179	73541234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079093
ENSMUSG00000004383.19_1	chr8	-	4623	15	FSM	ENSMUSG00000004383.19	ENSMUST00000119826.7	4647	15	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCTCTTCTCCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	74080144	73541226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74079099
ENSMUSG00000004383.19_2	chr8	-	4719	16	FSM	ENSMUSG00000004383.19	ENSMUST00000212459.2	4746	16	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTTTCTTCCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74080149	73541234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73542650_73544703_73544900_73550320_73550468_73564034_73564314_73578752_73578917_73585817_73585974_73609835_73609962_73612318_73612432_73638683_73638789_73774921_73775094_73825457_73825582_73843030_73843114_73858458_73858761_73940752_73940941_74066821_74066915_74079093
ENSMUSG00000004393.11_0	chr11	-	1935	14	FSM	ENSMUSG00000004393.11	ENSMUST00000004507.11	1956	14	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAAAGGTGGTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	6217759	6208926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6209259_6209546_6209621_6211615_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6214675_6214796_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUSG00000004393.11_11	chr11	-	1362	11	FSM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGGGTGAGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	6217721	6211624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417_6217580_6217659
ENSMUSG00000004393.11_14	chr11	-	1296	10	ISM	ENSMUSG00000004393.11	ENST00000431640.5	1368	11	148	4	148	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTTGGGTGAGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	6217575	6211624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_6211722_6212456_6212547_6212662_6212737_6213938_6214034_6214123_6214238_6215511_6215757_6216315_6216407_6216511_6216683_6216810_6216972_6217417
ENSMUSG00000004394.13_0	chr11	-	1980	5	FSM	ENSMUSG00000004394.13	ENSMUST00000004508.13	2003	5	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAATAGAACTAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	6224858	6220379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6221801_6223740_6223888_6224107_6224234_6224397_6224499_6224673
ENSMUSG00000004446.13_0	chr6	-	2169	6	FSM	ENSMUSG00000004446.13	ENSMUST00000004560.12	2189	6	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAAGATGAGTCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120893803	120869823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120871254_120872579_120872793_120874180_120874321_120877116_120877328_120878683_120878750_120893694
ENSMUSG00000004451.15_0	chr1	-	2275	5	FSM	ENSMUSG00000004451.15	ENSMUST00000004565.15	2289	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGATTTCGCCCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119432514	119398038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119399556_119403624_119403803_119405644_119405854_119411223_119411387_119432306
ENSMUSG00000004455.17_0	chr5	+	2367	7	FSM	ENSMUSG00000004455.17	ENSMUST00000102528.11	2384	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122296351	122313330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117
ENSMUSG00000004455.17_2	chr5	+	1432	8	FSM	ENSMUSG00000004455.17	ENSMUST00000086294.11	1442	8	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTTCGTGTCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122296422	122313330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122296679_122306237_122306370_122306981_122307213_122309884_122309990_122310794_122311019_122311208_122311344_122312117_122312179_122313042
ENSMUSG00000004460.18_1	chr16	+	1909	10	FSM	ENSMUSG00000004460.18	ENSMUST00000004574.14	1927	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTACTTTTCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	22676604	22691130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420
ENSMUSG00000004460.18_3	chr16	+	1618	11	FSM	ENSMUSG00000004460.18	ENSMUST00000178320.2	1628	11	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCAGGTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22676596	22691207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22676860_22681291_22681449_22684203_22684302_22685669_22685803_22687460_22687604_22687870_22687954_22688165_22688224_22689320_22689433_22689689_22689850_22690420_22690514_22690889
ENSMUSG00000004462.8_0	chr16	-	2773	8	FSM	ENSMUSG00000004462.8	ENSMUST00000004576.8	2803	8	24	6	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22676395	22631969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676094
ENSMUSG00000004462.8_1	chr16	-	2633	8	FSM	ENSMUSG00000004462.8	ENSMUST00000232075.2	2645	8	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTACTGTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22676405	22631969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22632707_22637130_22637279_22640831_22641330_22641452_22641640_22644515_22644883_22652627_22652784_22660478_22660858_22676244
ENSMUSG00000004473.11_0	chr7	-	1032	4	FSM	ENSMUSG00000004473.11	ENST00000599973.1	1045	4	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAACCGGTCTCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	43956178	43953966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_43954469_43955252_43955445_43955696_43955899_43956042
ENSMUSG00000004500.10_0	chr7	+	4298	4	FSM	ENSMUSG00000004500.10	ENSMUST00000038701.8	4315	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATGCCACTGGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	12699773	12707741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12700227_12702721_12702849_12703290_12703408_12704140
ENSMUSG00000004508.7_0	chr7	+	6160	10	FSM	ENSMUSG00000004508.7	ENSMUST00000004622.7	6168	10	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCCTAGATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	96730794	96958147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_96731114_96872679_96872981_96921008_96921250_96948034_96948610_96949505_96949577_96950577_96950843_96951575_96951667_96952230_96952337_96953356_96953483_96954082
ENSMUSG00000004530.13_0	chr5	-	3475	11	FSM	ENSMUSG00000004530.13	ENSMUST00000004646.13	3491	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACAGTCGTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	114046811	113980504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113982530_113983221_113983468_113984206_113984265_113985494_113985641_113986587_113986693_113987589_113987710_113988711_113988894_113990231_113990362_114003699_114003823_114020018_114020219_114046671
ENSMUSG00000004535.13_1	chr6	+	3269	18	FSM	ENSMUSG00000004535.13	ENSMUST00000080723.11	3285	18	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2013	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATGACCTTTGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52690723	52743759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52690841_52698282_52698452_52704183_52704287_52706265_52706454_52710175_52710335_52713834_52713984_52714066_52714158_52716528_52716715_52718935_52719161_52719676_52719824_52721206_52721340_52723654_52723756_52728069_52728196_52730289_52730362_52734538_52734714_52735197_52735341_52742005_52742089_52742857
ENSMUSG00000004558.16_0	chr14	-	2087	16	FSM	ENSMUSG00000004558.16	ENSMUST00000004673.15	2099	16	6	6	6	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTAATCCGGGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	52150881	52142733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
ENSMUSG00000004558.16_11	chr14	-	1953	16	FSM	ENSMUSG00000004558.16	ENST00000554143.5	1965	16	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52150856	52142748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUSG00000004558.16_12	chr14	-	2105	17	FSM	ENSMUSG00000004558.16	ENST00000553503.5	2130	17	15	10	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52150775	52142748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52149885_52149950_52150610
ENSMUSG00000004558.16_13	chr14	-	2084	15	FSM	ENSMUSG00000004558.16	ENSMUST00000111632.5	2103	15	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52150935	52142748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52150779
ENSMUSG00000004558.16_134	chr14	-	1482	15	FSM	ENSMUSG00000004558.16	ENST00000403829.7	1490	15	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAAGGGTAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	52222888	52143240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922_52149004_52222842
ENSMUSG00000004558.16_135	chr14	-	1432	14	ISM	ENSMUSG00000004558.16	ENST00000553503.5	2130	17	1791	502	-746	-8	internal_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAAGGGTAGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	52148999	52143240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148922
ENSMUSG00000004558.16_15	chr14	-	1993	17	FSM	ENSMUSG00000004558.16	ENST00000397851.6	2007	17	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52150854	52142748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922_52149004_52150779
ENSMUSG00000004558.16_23	chr14	-	1919	16	ISM	ENSMUSG00000004558.16	ENST00000397851.6	2007	17	1855	9	-751	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACTGAACAGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	52149004	52142748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_52143167_52143218_52143764_52143969_52144022_52144146_52144183_52144405_52144454_52144702_52144755_52145041_52145087_52145524_52145629_52145786_52145844_52146024_52146112_52146330_52146392_52147514_52147578_52147771_52147893_52148136_52148243_52148542_52148585_52148922
ENSMUSG00000004561.15_0	chr14	+	1606	14	FSM	ENSMUSG00000004561.15	ENSMUST00000047899.13	1623	14	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGAGGTGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	52122307	52129317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52122481_52122607_52122762_52122844_52122980_52124354_52124437_52124679_52124762_52125429_52125504_52126198_52126294_52126603_52126675_52126984_52127093_52127319_52127389_52128134_52128186_52128565_52128659_52128823_52129009_52129083
ENSMUSG00000004562.17_0	chr14	+	5597	24	FSM	ENSMUSG00000004562.17	ENSMUST00000093813.12	5621	24	17	7	-9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAGGAACTGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	52222311	52243701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242797
ENSMUSG00000004562.17_11	chr14	+	5020	23	ISM	ENSMUSG00000004562.17	ENSMUST00000182909.8	5108	24	2494	5	2472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGACTCTGAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	52224859	52243079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242615
ENSMUSG00000004562.17_7	chr14	+	5100	24	FSM	ENSMUSG00000004562.17	ENSMUST00000182909.8	5108	24	3	5	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGACTCTGAGGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	52222368	52243079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229268_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242615
ENSMUSG00000004562.17_9	chr14	+	5123	24	FSM	ENSMUSG00000004562.17	ENSMUST00000182760.8	5130	24	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCACTGTGACTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	52222366	52243073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52222449_52224859_52225058_52226158_52227396_52227504_52227673_52228360_52228488_52229057_52229155_52229241_52229350_52229470_52229588_52231550_52231647_52231739_52231856_52232336_52232464_52233522_52233646_52233720_52233865_52234332_52234944_52235069_52235305_52235600_52235688_52237279_52237496_52238305_52238477_52239741_52239920_52241110_52241216_52241429_52241574_52242068_52242200_52242445_52242493_52242615
ENSMUSG00000004565.16_0	chr8	+	4492	35	FSM	ENSMUSG00000004565.16	ENSMUST00000111070.4	4496	35	0	4	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3565383	3594262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004565.16_2	chr8	+	4402	34	FSM	ENSMUSG00000004565.16	ENSMUST00000004681.14	4438	34	31	5	-10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3565414	3594262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3565557_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3573998_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004565.16_5	chr8	+	4439	35	FSM	ENSMUSG00000004565.16	ENSMUST00000208002.2	4444	35	0	5	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCAGCCTGGTGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3565424	3594262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3565557_3566509_3566569_3566680_3566750_3567076_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3587968_3588086_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004565.16_7	chr8	+	4247	31	FSM	ENSMUSG00000004565.16	ENSMUST00000207941.2	4263	31	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAAGCAGCCTGGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3566889	3594260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3567165_3567324_3567408_3567557_3567656_3571274_3571416_3571507_3571668_3572100_3572182_3572276_3572406_3572587_3572669_3572758_3572925_3573257_3573342_3573757_3573868_3574010_3574167_3574251_3574330_3580961_3581168_3581428_3581561_3581637_3581762_3582002_3582117_3582351_3582428_3584529_3584671_3584831_3584896_3585461_3585631_3585819_3586003_3586542_3586662_3586862_3587020_3587248_3587366_3587450_3587521_3591290_3591593_3592297_3592415_3592844_3592942_3593066_3593177_3593953
ENSMUSG00000004567.17_0	chr8	+	2039	14	FSM	ENSMUSG00000004567.17	ENSMUST00000004683.13	2065	14	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGTAAATGCGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	3550470	3565220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3550628_3555737_3555944_3557148_3557317_3557400_3557567_3558318_3558428_3558683_3558781_3559135_3559236_3560319_3560427_3560539_3560690_3560813_3560916_3561687_3561811_3562649_3562866_3564782_3564914_3565013
ENSMUSG00000004568.14_0	chr8	+	6566	29	FSM	ENSMUSG00000004568.14	ENSMUST00000239102.2	6574	29	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCATCTCAGGCTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3403438	3506595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3403731_3414627_3414757_3430261_3430521_3431832_3431981_3434896_3435009_3436359_3436418_3436921_3436967_3437633_3437712_3438000_3438104_3438276_3438419_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ENSMUSG00000004568.14_4	chr8	+	5259	20	FSM	ENSMUSG00000004568.14	ENSMUST00000004684.13	5271	20	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGAGCATCTCAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3443039	3506591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3443103_3477348_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ENSMUSG00000004568.14_5	chr8	+	5195	19	FSM	ENSMUSG00000004568.14	ENSMUST00000238786.2	3794	19	647	-2048	647	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCCAGAGCATCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	3477346	3506588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3477491_3479231_3479345_3479498_3479640_3482618_3482870_3484871_3484998_3486981_3487100_3489486_3489739_3491219_3491297_3494888_3495068_3497001_3497091_3498382_3498569_3500295_3500437_3500780_3500915_3501490_3501539_3501630_3501679_3501814_3502286_3503037_3503372_3504158_3504285_3504371
ENSMUSG00000004591.17_0	chr3	-	6195	22	FSM	ENSMUSG00000004591.17	ENSMUST00000043812.15	6207	22	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTTTGTAGTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	142587757	142496666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_142499776_142499863_142499945_142500148_142500257_142504663_142504807_142505565_142505643_142506800_142506864_142509314_142509492_142515233_142515326_142515402_142515479_142515584_142515716_142516121_142516249_142516451_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUSG00000004591.17_7	chr3	-	2481	11	FSM	ENSMUSG00000004591.17	ENST00000316005.11	2489	11	8	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGACTTTTCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	142587759	142515983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_142516627_142517287_142517364_142517674_142517819_142526297_142526408_142527279_142527466_142534641_142534856_142534944_142535091_142536257_142536376_142544968_142545124_142559174_142559476_142587371
ENSMUSG00000004610.5_0	chr7	+	882	6	FSM	ENSMUSG00000004610.5	ENSMUST00000004729.5	893	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGGATGTCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	43093516	43107223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43106993
ENSMUSG00000004626.15_1	chr8	+	2888	19	FSM	ENSMUSG00000004626.15	ENSMUST00000160708.8	2908	19	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTAACACCGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	3680967	3693637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683847_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004626.15_11	chr8	+	1826	18	ISM	ENSMUSG00000004626.15	ENST00000441779.6	1878	19	1067	0	1067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3682222	3692782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_3682270_3682499_3682582_3683290_3683368_3683814_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004626.15_4	chr8	+	1836	19	FSM	ENSMUSG00000004626.15	ENST00000414284.6	1836	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3681155	3692782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683856_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004626.15_5	chr8	+	1878	19	FSM	ENSMUSG00000004626.15	ENST00000441779.6	1878	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCCACCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	3681155	3692782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3681205_3682219_3682270_3682499_3682582_3683290_3683368_3683814_3683927_3684019_3684124_3684474_3684624_3685445_3685531_3685615_3685747_3685831_3685940_3686180_3686239_3686355_3686422_3686493_3686575_3687115_3687255_3689507_3689618_3691110_3691207_3691734_3691821_3691897_3692056_3692645
ENSMUSG00000004631.16_0	chr6	-	1679	11	FSM	ENSMUSG00000004631.16	ENSMUST00000115579.8	1696	11	10	7	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTAATGTGTGGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	4747194	4674356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4690468_4690496_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004631.16_14	chr6	-	1374	9	FSM	ENSMUSG00000004631.16	ENST00000642394.1	1386	9	3	9	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACATCAACGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	4747103	4674420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4746979
ENSMUSG00000004631.16_26	chr6	-	1530	11	FSM	ENSMUSG00000004631.16	ENST00000644116.1	1547	11	10	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATGCCCACTGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	4747127	4674512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4674633_4677162_4677198_4678066_4678111_4689512_4689768_4691428_4691641_4694021_4694185_4707073_4707273_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004631.16_39	chr6	-	1330	11	FSM	ENSMUSG00000004631.16	ENST00000428696.7	1346	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCAGCACTGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	4747087	4674585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4674633_4677162_4677198_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707252_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004631.16_7	chr6	-	1587	10	FSM	ENSMUSG00000004631.16	ENST00000645725.1	1613	10	11	15	3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTAAAATAAATATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	4747103	4674378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4674633_4678066_4678111_4689578_4689768_4691428_4691641_4694021_4694185_4707073_4707321_4711307_4711381_4717920_4718079_4719373_4719497_4746979
ENSMUSG00000004633.18_0	chr6	+	2406	13	FSM	ENSMUSG00000004633.18	ENSMUST00000046856.14	2418	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTGTCCCCTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54016569	54277706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54017141_54150448_54150488_54171010_54171067_54192646_54192679_54195508_54195623_54197401_54197688_54250060_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ENSMUSG00000004633.18_5	chr6	+	2974	7	FSM	ENSMUSG00000004633.18	ENSMUST00000067741.10	2983	7	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTTGGAGCGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	54249477	54278789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54250139_54263078_54263164_54267251_54267426_54270022_54270101_54272768_54272907_54275029_54275136_54277057
ENSMUSG00000004637.16_0	chr8	+	1678	9	FSM	ENSMUSG00000004637.16	ENSMUST00000160862.8	1715	9	37	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	115166471	115445419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115444837
ENSMUSG00000004637.16_1	chr8	+	1746	9	FSM	ENSMUSG00000004637.16	ENSMUST00000109108.9	1771	9	12	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACATAAATACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	115166446	115601965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_115601340
ENSMUSG00000004637.16_3	chr8	+	2230	9	NNC	ENSMUSG00000004637.16	novel	2244	9	NA	NA	6	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTAACTATGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115166400	116079438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_+_115166619_115171207_115171273_115172079_115172138_115174899_115175079_115215637_115215745_115406526_115406616_115432940_115433127_115438726_115438992_116078375
ENSMUSG00000004642.14_1	chr5	-	1888	8	FSM	ENSMUSG00000004642.14	ENSMUST00000057551.14	1906	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	33809908	33797406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33803353_33803414_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004642.14_2	chr5	-	1559	7	FSM	ENSMUSG00000004642.14	ENSMUST00000101354.10	1578	7	11	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAACATTGCCCTATA	NA	NA	NA	NA	NA	NA	NA	NA	33809639	33797406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33798273_33799244_33799327_33801080_33801231_33802843_33802982_33807086_33807192_33809306_33809424_33809538
ENSMUSG00000004651.7_0	chr7	-	6030	5	FSM	ENSMUSG00000004651.7	ENSMUST00000004770.7	6042	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTTTAATTTATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87142717	87073987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_87078493_87087144_87087327_87121606_87121755_87133028_87133246_87141739
ENSMUSG00000004655.6_0	chr6	+	2608	4	FSM	ENSMUSG00000004655.6	ENSMUST00000004774.4	2627	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCCTCCAGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	55313429	55325534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_55313860_55322390_55322556_55322797_55322879_55323602
ENSMUSG00000004661.16_0	chr9	-	1967	8	FSM	ENSMUSG00000004661.16	ENSMUST00000098686.4	1969	8	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTTTTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57744074	57701969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57702318_57703389_57703636_57703754_57704072_57705324_57705509_57717447_57717521_57717691_57717764_57740898_57741516_57743964
ENSMUSG00000004665.11_1	chr10	+	2435	7	FSM	ENSMUSG00000004665.11	ENSMUST00000004784.11	2460	7	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAAAGGTTACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79824428	79831882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79824575_79827193_79827316_79828106_79828174_79828276_79828415_79829047_79829165_79829261_79829409_79830184
ENSMUSG00000004667.19_0	chr10	-	1128	7	FSM	ENSMUSG00000004667.19	ENSMUST00000004786.10	1148	7	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4091	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTACTGTGGTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	79875617	79871790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79872136_79872360_79872433_79872597_79872677_79872748_79872808_79873021_79873219_79874272_79874448_79875416
ENSMUSG00000004677.18_1	chr8	+	6308	40	FSM	ENSMUSG00000004677.18	ENSMUST00000212935.2	6316	40	4	4	4	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGGACCCCCCTACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	71725361	71812561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786956_71787039_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801546_71801578_71801839_71802778_71802834_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811606_71811738_71811968_71812097_71812307
ENSMUSG00000004677.18_3	chr8	+	7274	40	FSM	ENSMUSG00000004677.18	ENSMUST00000170242.8	7297	40	16	7	-4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTTAGTGTGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	71725373	71813349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71725474_71742885_71743781_71767768_71767864_71774425_71774489_71775577_71775678_71775908_71776010_71776507_71776638_71778496_71778587_71780523_71780641_71781189_71781325_71783351_71783474_71785897_71786040_71786270_71786476_71786959_71787039_71791550_71791665_71793403_71793444_71795405_71795529_71796256_71796338_71796733_71796845_71798673_71798797_71800257_71800575_71800974_71801839_71802778_71802840_71803570_71803693_71804530_71804659_71804813_71804990_71806385_71806485_71806605_71806780_71807157_71807200_71807359_71807472_71807881_71807956_71808338_71808532_71808609_71808739_71808928_71809035_71809164_71809297_71810756_71810881_71811259_71811308_71811606_71811738_71811968_71812097_71812201
ENSMUSG00000004698.12_0	chr12	-	4283	11	FSM	ENSMUSG00000004698.12	ENST00000622668.4	4293	11	10	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATCCCTTTTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	34578872	34421501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481861_34481989_34483079_34483231_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_10	chr12	-	3810	12	FSM	ENSMUSG00000004698.12	ENST00000681273.1	3830	12	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCCTGCTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	34578850	34422220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_34424283_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34457764_34457897_34479496_34479619_34481861_34481989_34483079_34483222_34487135_34487378_34578281_34578345_34578598
ENSMUSG00000004698.12_13	chr12	-	2037	9	FSM	ENSMUSG00000004698.12	ENST00000524023.1	2054	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGTTGAAGGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34487368	34423386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_34424138_34439243_34439462_34440140_34440352_34443281_34443405_34452750_34452867_34479496_34479619_34481867_34481989_34483079_34483222_34487135
ENSMUSG00000004748.6_0	chr11	-	1387	4	FSM	ENSMUSG00000004748.6	ENSMUST00000004868.6	1411	4	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGCATCTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4045431	4041489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4042300_4043800_4044034_4044388_4044517_4045215
ENSMUSG00000004748.6_1	chr11	-	359	3	FSM	ENSMUSG00000004748.6	ENST00000407550.3	369	3	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTAGGGGCCTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4045286	4043804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4043965_4044388_4044517_4045215
ENSMUSG00000004748.6_2	chr11	-	286	2	ISM	ENSMUSG00000004748.6	ENST00000407550.3	369	3	776	6	776	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTAGGGGCCTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	4044514	4043804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_4043965_4044388
ENSMUSG00000004768.15_0	chr1	+	4300	8	FSM	ENSMUSG00000004768.15	ENSMUST00000088287.10	4322	8	12	10	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTAGAATGAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33758987	33781635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_33759255_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUSG00000004768.15_5	chr1	+	4203	8	FSM	ENSMUSG00000004768.15	ENSMUST00000115174.4	4218	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTAGAATGAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	33759495	33781635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_33759666_33760688_33760781_33762866_33763087_33764014_33764101_33773782_33773940_33775880_33775964_33777368_33777462_33778333
ENSMUSG00000004771.13_0	chr9	-	2325	5	FSM	ENSMUSG00000004771.13	ENSMUST00000172298.8	2336	5	10	1	-6	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGGTGAGATTACATTC	NA	NA	NA	NA	NA	NA	NA	NA	64645030	64622581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64624271_64632783_64632865_64633905_64634100_64635515_64635712_64644865
ENSMUSG00000004788.12_0	chr12	+	1587	8	FSM	ENSMUSG00000004788.12	ENSMUST00000004910.12	1605	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTAACTGGAAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	85266266	85273396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85266499_85266595_85266717_85266870_85267020_85268250_85268415_85269517_85269614_85270154_85270293_85271328_85271396_85272776
ENSMUSG00000004789.11_0	chr12	+	2749	15	FSM	ENSMUSG00000004789.11	ENSMUST00000053811.10	2764	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGCTCCGGGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	85157616	85180857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85157734_85158271_85158306_85162046_85162096_85165132_85165189_85165300_85165376_85165555_85165612_85166006_85166119_85168760_85168914_85169553_85169631_85170547_85170646_85175084_85175216_85176565_85176640_85177233_85177318_85177670_85177839_85179392
ENSMUSG00000004791.8_0	chr12	-	2024	7	FSM	ENSMUSG00000004791.8	ENSMUST00000223220.2	2080	7	48	8	48	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAACATGTCTAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	85224516	85213416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85214189_85216131_85216192_85216284_85216315_85218148_85218229_85218433_85218631_85222529_85222570_85223671
ENSMUSG00000004798.15_0	chr11	-	5732	27	FSM	ENSMUSG00000004798.15	ENSMUST00000004920.4	5743	27	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTTCATATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	61745889	61666475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61668666_61670499_61670636_61672417_61672576_61672831_61672951_61674362_61674542_61678254_61678464_61682259_61682410_61689888_61689993_61690285_61690477_61690727_61691015_61692308_61692390_61694467_61694614_61698887_61699026_61703543_61703605_61710110_61710283_61715464_61715554_61716667_61716716_61718427_61718511_61720217_61720277_61721415_61721518_61724238_61724313_61725605_61725780_61730935_61730973_61732124_61732158_61741887_61741930_61744091_61744185_61745312
ENSMUSG00000004815.13_0	chr5	-	4923	23	FSM	ENSMUSG00000004815.13	ENSMUST00000053913.13	4938	23	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATGAAACCCTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	108808666	108794562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108796678_108797010_108797164_108797243_108797356_108797452_108797600_108797690_108797792_108798066_108798246_108798355_108798505_108798682_108798835_108800259_108800376_108801046_108801086_108801501_108801653_108801949_108802012_108802221_108802277_108802409_108802501_108802581_108802803_108802973_108803075_108803155_108803231_108803305_108803460_108803709_108803836_108803911_108803998_108804289_108804390_108806071_108806152_108808308
ENSMUSG00000004837.3_0	chr11	+	532	4	FSM	ENSMUSG00000004837.3	ENST00000573099.5	540	4	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACACAAGACCAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	61544124	61562683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61544251_61551047_61551146_61555010_61555134_61562498
ENSMUSG00000004842.19_0	chr16	+	632	4	FSM	ENSMUSG00000004842.19	ENST00000560656.1	647	4	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGATAAGGCTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	65317521	65330856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_65317657_65320448_65320521_65326615_65326841_65330656
ENSMUSG00000004843.8_0	chr16	-	1853	6	FSM	ENSMUSG00000004843.8	ENSMUST00000004965.8	1872	6	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGACTGCCTAACGCG	NA	NA	NA	NA	NA	NA	NA	NA	65359598	65336018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65347848_65347941_65359360
ENSMUSG00000004843.8_11	chr16	-	1443	5	FSM	ENSMUSG00000004843.8	ENST00000471660.5	1467	5	15	9	-13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAAAACTGAGACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	65359625	65336363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_65337137_65337305_65337413_65342162_65342266_65343734_65343930_65359360
ENSMUSG00000004846.11_0	chr5	+	3258	19	FSM	ENSMUSG00000004846.11	ENSMUST00000004968.11	3280	19	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCTGCAAAATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	137015881	137025489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137016658_137016970_137017063_137017188_137017326_137017425_137017590_137017736_137017850_137017979_137018044_137018451_137018550_137018750_137018853_137019004_137019131_137019271_137019394_137019598_137019704_137019812_137019939_137020153_137020296_137020397_137020512_137020625_137020695_137022062_137022168_137022996_137023144_137023786_137023913_137024959
ENSMUSG00000004849.15_0	chr5	-	1337	5	FSM	ENSMUSG00000004849.15	ENSMUST00000111080.8	1353	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGACTTTGCCTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	137074979	137063852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137064646_137066271_137066410_137070622_137070732_137071917_137072097_137074861
ENSMUSG00000004864.14_0	chr17	+	984	10	FSM	ENSMUSG00000004864.14	ENST00000373766.9	1001	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAGTGATTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	28988336	28997472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28988503_28988984_28989115_28990131_28990191_28994227_28994337_28994527_28994558_28995108_28995157_28995275_28995391_28996696_28996776_28997050_28997228_28997401
ENSMUSG00000004865.17_0	chr17	-	4632	16	FSM	ENSMUSG00000004865.17	ENSMUST00000130643.9	4653	16	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACCTGCTTGGTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	28841671	28806630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28809216_28810174_28810268_28811191_28811262_28813143_28813252_28817875_28817977_28818444_28818844_28819216_28819431_28819842_28819869_28821661_28821828_28822411_28822519_28824272_28824361_28825280_28825369_28826057_28826167_28827619_28827739_28840950_28841012_28841373
ENSMUSG00000004872.16_0	chr1	-	1618	9	FSM	ENSMUSG00000004872.16	ENST00000409551.7	1627	9	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTTTCCGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	78173535	78079420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_78079473_78079964_78080212_78098214_78098430_78099227_78099394_78108864_78109071_78169078_78169214_78170376_78170504_78171887_78172124_78173301
ENSMUSG00000004872.16_10	chr1	-	1203	7	ISM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	16	18768	16	-18768	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCGTGTTTCTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	78173414	78098212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_78098430_78099227_78099394_78108864_78109071_78169078_78169214_78170376_78170507_78171887_78172124_78173301
ENSMUSG00000004872.16_3	chr1	-	1227	8	FSM	ENSMUSG00000004872.16	ENST00000336840.11	1245	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTGCATAAGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	78173418	78079450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_78079473_78098214_78098430_78099227_78099394_78108864_78109071_78169078_78169214_78170376_78170507_78171887_78172124_78173301
ENSMUSG00000004880.12_0	chr1	-	3486	14	FSM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	5	19	5	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAGTTGAAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	181669939	181642918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942_181666122_181669852
ENSMUSG00000004880.12_1	chr1	-	3404	13	ISM	ENSMUSG00000004880.12	ENSMUST00000005003.12	3510	14	3820	17	3820	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTTGAAAATAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	181666124	181642916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_181644584_181644829_181644953_181645053_181645135_181646404_181646574_181647428_181647555_181648238_181648343_181649000_181649193_181653186_181653242_181656276_181656474_181659106_181659300_181659713_181659798_181663622_181663854_181665942
ENSMUSG00000004885.6_0	chr3	+	908	4	FSM	ENSMUSG00000004885.6	ENSMUST00000005019.6	931	4	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAAAATCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87855984	87860672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87856218_87859421_87859601_87859784_87859902_87860293
ENSMUSG00000004891.17_0	chr3	+	6106	4	FSM	ENSMUSG00000004891.17	ENSMUST00000090973.12	6126	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACAATGTCTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87878411	87887750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727
ENSMUSG00000004891.17_1	chr3	+	5939	5	FSM	ENSMUSG00000004891.17	ENSMUST00000160694.2	5958	5	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTACAATGTCTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	87878446	87887750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87879296_87880298_87880424_87882108_87882183_87882727_87883888_87884019
ENSMUSG00000004895.10_0	chr3	-	2094	7	FSM	ENSMUSG00000004895.10	ENSMUST00000005015.10	2099	7	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTGTCTGGATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87792911	87766210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87766654_87767452_87767519_87769437_87769582_87774621_87774718_87776889_87777457_87779516_87779565_87792181
ENSMUSG00000004896.17_0	chr3	-	1182	6	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	4586	3355	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGGACAGGAAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	87830979	87826856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_-_87827011_87829121_87829354_87829435_87829532_87829692_87829796_87830238_87830370_87830513
ENSMUSG00000004896.17_14	chr3	-	2455	8	FSM	ENSMUSG00000004896.17	ENSMUST00000005016.16	2492	8	16	21	16	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87837435	87830232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835063_87835230_87835356_87837162
ENSMUSG00000004896.17_15	chr3	-	1605	7	FSM	ENSMUSG00000004896.17	ENSMUST00000160074.8	1620	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATACCATGTAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87835555	87830969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87831220_87831650_87831836_87832253_87832739_87834037_87834182_87834361_87834425_87834869_87835023_87835230
ENSMUSG00000004897.17_0	chr3	+	2229	6	FSM	ENSMUSG00000004897.17	ENSMUST00000005017.15	2245	6	9	7	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGATTCTGACTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	87813636	87823432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208
ENSMUSG00000004897.17_1	chr3	+	1980	7	FSM	ENSMUSG00000004897.17	ENST00000537739.5	1996	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATCCTGATTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	87813775	87823426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87814022_87820397_87820475_87820619_87820759_87821358_87821545_87821779_87821998_87822208_87822453_87822556
ENSMUSG00000004929.13_0	chr10	+	2824	13	FSM	ENSMUSG00000004929.13	ENSMUST00000005057.7	2832	13	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAGACAGTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	80905876	80918393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80906113_80908986_80909200_80911344_80911494_80912776_80912885_80913746_80913850_80914303_80914465_80915291_80915428_80915704_80916072_80916246_80916449_80916860_80917048_80917140_80917270_80917433_80917571_80917697
ENSMUSG00000004931.12_0	chr10	+	2250	12	FSM	ENSMUSG00000004931.12	ENSMUST00000220297.2	2268	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTATTAAGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	81102802	81109061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81102968_81104007_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUSG00000004931.12_4	chr10	+	2096	11	FSM	ENSMUSG00000004931.12	ENSMUST00000057798.9	2106	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGAGGGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81104015	81109080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81104154_81104612_81105296_81105378_81105419_81106801_81106948_81107029_81107117_81107198_81107361_81107495_81107667_81108018_81108232_81108417_81108538_81108655_81108794_81108882
ENSMUSG00000004934.15_0	chr10	-	2550	11	FSM	ENSMUSG00000004934.15	ENSMUST00000005064.14	2571	11	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAACATCTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81003743	80989106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80990207_80990281_80990413_80991424_80991586_80991666_80991741_80992845_80992952_80993060_80993190_80993270_80993362_80993484_80993527_80993766_80993852_80999618_81000025_81003518
ENSMUSG00000004936.9_0	chr9	-	2417	11	FSM	ENSMUSG00000004936.9	ENSMUST00000005066.9	2436	11	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGATTTCTGCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64160903	64093060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64094081_64094572_64094619_64094958_64095021_64098548_64098614_64098734_64098937_64100983_64101109_64111712_64111765_64112392_64112471_64119865_64120013_64121680_64121892_64160494
ENSMUSG00000004937.7_0	chr10	-	1963	12	FSM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCTGCCTCTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80896012	80879914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949_80888086_80895961
ENSMUSG00000004937.7_1	chr10	-	1904	11	ISM	ENSMUSG00000004937.7	ENSMUST00000005067.6	1969	12	7935	6	7924	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCTGCCTCTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	80888077	80879914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886921_80887056_80887164_80887949
ENSMUSG00000004937.7_13	chr10	-	904	10	FSM	ENSMUSG00000004937.7	ENST00000676984.1	913	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGACAACGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80896014	80882036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887949_80888071_80895961
ENSMUSG00000004937.7_14	chr10	-	842	9	ISM	ENSMUSG00000004937.7	ENST00000676984.1	913	10	7953	9	7940	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGACAACGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80888061	80882036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887949
ENSMUSG00000004937.7_15	chr10	-	998	11	FSM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGACAACGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80896001	80882036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888071_80895961
ENSMUSG00000004937.7_16	chr10	-	946	10	ISM	ENSMUSG00000004937.7	ENST00000221566.7	1007	11	7943	9	7943	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGACAACGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80888058	80882036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949
ENSMUSG00000004937.7_3	chr10	-	1957	12	FSM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACGCTCTGCCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80896012	80879917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949_80888086_80895961
ENSMUSG00000004937.7_5	chr10	-	1896	11	ISM	ENSMUSG00000004937.7	ENSMUST00000218208.2	1964	12	7937	7	7926	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACGCTCTGCCTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80888075	80879917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80880838_80882023_80882147_80882308_80882399_80883472_80883511_80884213_80884277_80884671_80884811_80885086_80885192_80885615_80885716_80886832_80886918_80887056_80887164_80887949
ENSMUSG00000004939.8_0	chr10	-	1842	7	FSM	ENSMUSG00000004939.8	ENSMUST00000005069.8	1854	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAAAACATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81037879	81034009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81035281_81035437_81035545_81035858_81035931_81036125_81036283_81036365_81036415_81036724_81036816_81037784
ENSMUSG00000004939.8_1	chr10	-	1748	6	ISM	ENSMUSG00000004939.8	ENSMUST00000005069.8	1854	7	1069	6	1069	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAAAACATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	81036816	81034009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_81035281_81035437_81035545_81035858_81035931_81036125_81036283_81036365_81036415_81036724
ENSMUSG00000004945.16_0	chr17	-	933	4	FSM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCAGCGGGGGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5490510	5461151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_5461743_5483716_5483855_5489806_5489908_5490407
ENSMUSG00000004945.16_2	chr17	-	832	3	ISM	ENSMUSG00000004945.16	ENSMUST00000005053.14	948	4	609	7	609	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCAGCGGGGGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5489909	5461151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_5461743_5483716_5483855_5489806
ENSMUSG00000004945.16_4	chr17	-	796	4	FSM	ENSMUSG00000004945.16	ENSMUST00000188282.7	822	4	22	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGGAAGGGAGTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	5490512	5482573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_5483026_5483716_5483855_5489806_5489908_5490407
ENSMUSG00000004945.16_6	chr17	-	751	3	FSM	ENSMUSG00000004945.16	ENSMUST00000185896.2	780	3	23	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACGAATGACTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5490508	5483305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_5483855_5489806_5489908_5490407
ENSMUSG00000004947.16_0	chr5	+	2625	11	FSM	ENSMUSG00000004947.16	ENSMUST00000111142.9	2650	11	17	8	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCATCTGTTGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	136023670	136061718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_11	chr5	+	2042	10	FSM	ENSMUSG00000004947.16	ENST00000413936.6	2062	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCGGGCCTGCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	136023712	136061340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136023821_136038867_136039211_136040864_136041502_136050608_136050713_136055323_136055462_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004947.16_7	chr5	+	2474	10	FSM	ENSMUSG00000004947.16	ENSMUST00000111145.10	2493	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCAACCTGCATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	136023677	136061712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136023821_136025143_136025307_136038867_136039211_136040864_136041502_136050608_136050713_136057352_136057427_136057917_136058077_136059333_136059496_136060039_136060130_136061113
ENSMUSG00000004951.11_0	chr5	+	887	3	FSM	ENSMUSG00000004951.11	ENSMUST00000005077.7	903	3	10	6	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCGTCTGACTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135916782	135918411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135917289_135917902_135917967_135918094
ENSMUSG00000004951.11_2	chr5	+	757	3	FSM	ENSMUSG00000004951.11	ENST00000674547.1	774	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTTGCAAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	135916921	135918386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135917289_135917902_135918001_135918094
ENSMUSG00000004951.11_3	chr5	+	719	3	FSM	ENSMUSG00000004951.11	ENST00000674638.1	735	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAGTTGCAAGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	135916920	135918386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135917289_135917907_135917967_135918094
ENSMUSG00000004952.14_1	chr5	+	2904	21	FSM	ENSMUSG00000004952.14	ENSMUST00000042135.14	2914	21	8	2	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGAGGTGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	136112777	136140712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136113032_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127634_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924_136136046_136140105_136140171_136140284
ENSMUSG00000004952.14_19	chr5	+	2191	18	FSM	ENSMUSG00000004952.14	ENST00000461209.5	2199	18	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCTCAAGGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	136118179	136136048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127638_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924
ENSMUSG00000004952.14_34	chr5	+	507	5	FSM	ENSMUSG00000004952.14	ENST00000454572.1	517	5	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGTGAGGAGCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	136120056	136129867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136120162_136120601_136120664_136125514_136125647_136127541_136127638_136129755
ENSMUSG00000004952.14_9	chr5	+	2340	19	FSM	ENSMUSG00000004952.14	ENST00000462172.5	2353	19	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCTCAAGGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	136112970	136136048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136113147_136118206_136118264_136120047_136120162_136120601_136120664_136121991_136122122_136124380_136124463_136125514_136125647_136127541_136127638_136129755_136129874_136130097_136130249_136130478_136130544_136130798_136130912_136131088_136131282_136131381_136131520_136132133_136132279_136132690_136132861_136133369_136133508_136134457_136134594_136135924
ENSMUSG00000004961.8_0	chr7	-	1529	7	FSM	ENSMUSG00000004961.8	ENST00000590851.5	1548	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1899	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCAGCTGTGAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4549629	4542874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4543298_4544078_4544213_4544825_4544944_4545189_4545358_4545721_4545890_4546016_4546137_4549231
ENSMUSG00000004980.17_0	chr6	-	1633	10	FSM	ENSMUSG00000004980.17	ENSMUST00000069949.13	1647	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGAATTGTGCACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	51446866	51437917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51438414_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_19	chr6	-	1648	12	FSM	ENSMUSG00000004980.17	ENSMUST00000090002.10	1662	12	10	4	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATTACTTGGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	51446815	51438107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51438414_51438899_51439036_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_24	chr6	-	1501	10	FSM	ENSMUSG00000004980.17	ENSMUST00000204188.3	1518	10	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAGGAAATTGTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	51446745	51439749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_26	chr6	-	1705	12	FSM	ENSMUSG00000004980.17	ENSMUST00000114459.8	1728	12	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGAAATTGTGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	51446792	51439748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004980.17_30	chr6	-	1624	11	FSM	ENSMUSG00000004980.17	ENSMUST00000203220.3	1638	11	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCTAAAGGAAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	51446752	51439753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51440235_51440390_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51446650
ENSMUSG00000004980.17_7	chr6	-	3884	11	FSM	ENSMUSG00000004980.17	ENST00000356674.8	3904	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGATCGACACTATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	51447108	51438041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51440474_51441068_51441192_51441407_51441528_51442158_51442222_51443121_51443203_51443282_51443385_51443474_51443686_51443885_51444033_51444164_51444276_51444370_51444407_51446650
ENSMUSG00000004994.13_0	chr8	-	2070	9	ISM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	3316	0	3283	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGCTGGAATTAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	84993693	84984423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
ENSMUSG00000004994.13_1	chr8	-	2115	10	FSM	ENSMUSG00000004994.13	ENSMUST00000098578.10	2119	10	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGAATGCTGGAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	84997009	84984427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84985556_84985741_84985881_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464_84993704_84996970
ENSMUSG00000004994.13_4	chr8	-	1427	8	ISM	ENSMUSG00000004994.13	ENSMUST00000005120.12	1441	9	3281	0	3281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTTGTTTCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84993695	84984929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84985556_84986922_84987096_84987171_84987315_84988368_84988430_84989621_84989678_84990490_84990574_84990937_84990992_84993464
ENSMUSG00000004996.10_0	chr8	-	1065	5	FSM	ENSMUSG00000004996.10	ENSMUST00000126435.8	2819	5	59	1695	0	-1695	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTTCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84983894	84978229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84978341_84980491_84980717_84980804_84980982_84982872_84983049_84983518
ENSMUSG00000004996.10_3	chr8	-	902	4	ISM	ENSMUSG00000004996.10	ENST00000319545.12	936	5	10	73769	10	-1695	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTCCGTCTTCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84983884	84978229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84978341_84980491_84980717_84980804_84980982_84983495
ENSMUSG00000005034.16_0	chr3	-	4327	10	FSM	ENSMUSG00000005034.16	ENSMUST00000102515.10	4347	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATAAAAGCTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	146518706	146435339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146518392
ENSMUSG00000005034.16_9	chr3	-	4061	10	FSM	ENSMUSG00000005034.16	ENSMUST00000106137.8	4061	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	146476016	146435619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146438469_146443688_146443854_146451014_146451138_146452354_146452451_146453675_146453803_146456237_146456321_146457201_146457301_146461386_146461516_146463461_146463524_146475688
ENSMUSG00000005043.14_0	chr11	-	4331	8	FSM	ENSMUSG00000005043.14	ENSMUST00000005173.11	4357	8	18	8	-8	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTAATGTCTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	119246344	119234315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119237664_119238513_119238718_119240365_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ENSMUSG00000005043.14_5	chr11	-	4207	8	NNC	ENSMUSG00000005043.14	novel	4357	8	NA	NA	11	-4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAAATCTGAGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	119246325	119234327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_119237664_119238513_119238624_119240364_119240448_119240802_119240960_119241227_119241379_119241749_119241856_119243471_119243633_119246222
ENSMUSG00000005054.8_0	chr10	+	582	3	FSM	ENSMUSG00000005054.8	ENSMUST00000005185.8	603	3	11	10	11	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	2589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATATGAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78261513	78263446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_78261692_78262760_78262863_78263144
ENSMUSG00000005057.14_0	chr5	-	2764	9	FSM	ENSMUSG00000005057.14	ENSMUST00000196397.5	2797	9	23	10	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTACCCCCTGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	136273685	136247010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273486
ENSMUSG00000005057.14_1	chr5	-	2836	9	FSM	ENSMUSG00000005057.14	ENSMUST00000005188.14	2848	9	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTACCCCCTGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	136273753	136247010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136248007_136248495_136248668_136250701_136250911_136253008_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
ENSMUSG00000005057.14_5	chr5	-	1778	6	FSM	ENSMUSG00000005057.14	ENSMUST00000196447.2	1783	6	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTTCTGAACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	136273688	136252624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136253177_136253258_136253351_136254057_136254150_136256220_136256323_136260506_136261241_136273482
ENSMUSG00000005069.13_1	chr6	-	3066	15	FSM	ENSMUSG00000005069.13	ENSMUST00000080557.12	3073	15	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTCCGCTGCTGACGTT	NA	NA	NA	NA	NA	NA	NA	NA	124392019	124373775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUSG00000005069.13_11	chr6	-	1586	12	ISM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	349	5	349	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACAGTGGGATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	124390649	124374932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380171_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527
ENSMUSG00000005069.13_12	chr6	-	1630	13	FSM	ENSMUSG00000005069.13	ENST00000400933.2	1635	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACAGTGGGATGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	124390998	124374932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380171_124380770_124380867_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965
ENSMUSG00000005069.13_6	chr6	-	3122	16	FSM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATAAACTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	124391991	124373802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245_124391410_124391931
ENSMUSG00000005069.13_7	chr6	-	3053	15	ISM	ENSMUSG00000005069.13	ENSMUST00000035861.6	3139	16	596	12	-8	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATAAACTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	124391400	124373802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_124375130_124375302_124375461_124375739_124375906_124376206_124376414_124376817_124376889_124377046_124377191_124380074_124380195_124380770_124380867_124381091_124381203_124381588_124381680_124382125_124382232_124390227_124390360_124390527_124390661_124390965_124391002_124391245
ENSMUSG00000005078.17_0	chr12	+	1246	7	FSM	ENSMUSG00000005078.17	ENSMUST00000057257.10	1292	7	15	31	15	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATGCCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72132645	72147604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72132958_72136088_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_10	chr12	+	1519	5	ISM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	3873	15	3873	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAAATGTTAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	72136728	72148280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_2	chr12	+	1854	7	FSM	ENSMUSG00000005078.17	ENSMUST00000117449.8	1874	7	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGTAAAATAACTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	72132637	72148222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72132958_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_4	chr12	+	1625	7	FSM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTTAAGCATTACGA	NA	NA	NA	NA	NA	NA	NA	NA	72132855	72148284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72132885_72136106_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005078.17_9	chr12	+	1590	6	ISM	ENSMUSG00000005078.17	ENST00000356057.9	1636	7	3257	11	3257	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTTAAGCATTACGA	NA	NA	NA	NA	NA	NA	NA	NA	72136112	72148284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_72136181_72136729_72136885_72140710_72140918_72141459_72141642_72146820_72146898_72147383
ENSMUSG00000005087.18_0	chr2	-	5591	19	FSM	ENSMUSG00000005087.18	ENSMUST00000005218.15	5614	19	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAAATGACCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	102731956	102641494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102672605_102672723_102673180_102673295_102675629_102675756_102676747_102676865_102679001_102679128_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_1	chr2	-	5026	14	FSM	ENSMUSG00000005087.18	ENSMUST00000111194.8	5045	14	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAAATGACCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	102732000	102641494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102669702_102669823_102672605_102672723_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_10	chr2	-	2827	9	FSM	ENSMUSG00000005087.18	ENSMUST00000099673.9	2848	9	12	9	-3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAACAAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102731843	102642900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_14	chr2	-	762	6	FSM	ENSMUSG00000005087.18	ENST00000526669.6	780	6	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTTTCTATTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	102731706	102644362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654653_102691985_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_16	chr2	-	1022	8	FSM	ENSMUSG00000005087.18	ENST00000352818.8	1028	8	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCTACGCCATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	102731686	102644479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005087.18_17	chr2	-	949	7	ISM	ENSMUSG00000005087.18	ENST00000352818.8	1028	8	35899	1	35899	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCCTACGCCATTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	102695792	102644479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_102644683_102652552_102652632_102654605_102654678_102683359_102683582_102686243_102686313_102691904_102692042_102695625
ENSMUSG00000005087.18_9	chr2	-	3453	14	FSM	ENSMUSG00000005087.18	ENSMUST00000060516.14	3495	14	16	26	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAACAAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102731824	102642900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102644683_102652552_102652632_102654605_102654678_102658886_102658956_102661674_102661882_102662827_102662918_102664578_102664681_102668157_102668284_102669702_102669823_102683359_102683582_102686243_102686313_102691904_102692042_102695625_102695792_102731612
ENSMUSG00000005089.16_13	chr2	+	1848	11	FSM	ENSMUSG00000005089.16	ENST00000644868.1	1864	11	9	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAGGAAAAGATGCATA	NA	NA	NA	NA	NA	NA	NA	NA	102566294	102611960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_102566429_102568121_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611061_102611133_102611807
ENSMUSG00000005089.16_14	chr2	+	3076	11	FSM	ENSMUSG00000005089.16	ENST00000643000.1	3087	11	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGTTAGCGGGGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	102566299	102613343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_102566429_102568121_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807_102612523_102612601
ENSMUSG00000005089.16_22	chr2	+	2303	10	ISM	ENSMUSG00000005089.16	ENST00000644299.1	2954	11	6	724	3	-6	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGACCATAAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	102566291	102612483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_102566429_102568121_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005089.16_8	chr2	+	2370	11	FSM	ENSMUSG00000005089.16	ENST00000645194.1	2376	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGACCATAAAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	102490142	102612483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_102490207_102566288_102566429_102568121_102568275_102570033_102570285_102574152_102574319_102578813_102578941_102586251_102586486_102591359_102591555_102597277_102597413_102607771_102608001_102611807
ENSMUSG00000005102.14_0	chr2	+	5173	39	FSM	ENSMUSG00000005102.14	ENSMUST00000005233.12	5212	39	32	7	32	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATATCTGCTGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	118219130	118305708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118219334_118231015_118231129_118235527_118235631_118238832_118238986_118241363_118241445_118243415_118243565_118247707_118247824_118251198_118251354_118252443_118252980_118257045_118257153_118258308_118258467_118261276_118261705_118262691_118262762_118265103_118265188_118266643_118266767_118269446_118269552_118271642_118271701_118272495_118272576_118273605_118273708_118276740_118276795_118278756_118278994_118280790_118280867_118281892_118282015_118285308_118285359_118286256_118286426_118287606_118287724_118288306_118288373_118292207_118292379_118292704_118292840_118293144_118293253_118294426_118294556_118296833_118296921_118298642_118298756_118300724_118300784_118301316_118301415_118302370_118302440_118303122_118303168_118304512_118304632_118305483
ENSMUSG00000005103.13_0	chr5	-	3078	15	FSM	ENSMUSG00000005103.13	ENSMUST00000005234.13	3089	15	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGATCACTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	38719139	38684156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38685256_38686867_38687013_38687279_38687454_38688357_38688469_38690826_38690915_38692526_38692684_38694481_38694570_38697355_38697590_38697846_38697928_38698143_38698222_38703016_38703198_38704286_38704435_38708719_38708811_38718422_38718545_38718858
ENSMUSG00000005124.11_0	chr15	+	5076	5	FSM	ENSMUSG00000005124.11	ENSMUST00000005255.9	5097	5	10	11	10	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	3077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAACAGTAACTTCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	66763178	66795039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66763484_66778249_66778530_66784677_66784939_66789125_66789320_66791003
ENSMUSG00000005124.11_11	chr15	+	424	2	FSM	ENSMUSG00000005124.11	ENST00000519433.1	442	2	11	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGGTGGGTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66763353	66791297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66763484_66791003
ENSMUSG00000005124.11_14	chr15	+	842	4	FSM	ENSMUSG00000005124.11	ENST00000220856.6	851	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGGTGGGTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66763409	66791297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66763484_66778249_66778530_66789125_66789320_66791003
ENSMUSG00000005124.11_21	chr15	+	768	3	ISM	ENSMUSG00000005124.11	ENST00000220856.6	851	4	14842	7	14842	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGGTGGGTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66778249	66791297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_66778530_66789125_66789320_66791003
ENSMUSG00000005124.11_5	chr15	+	1184	5	FSM	ENSMUSG00000005124.11	ENST00000250160.11	1199	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTAGGTGGGTGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66763325	66791297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66763484_66778249_66778530_66784677_66784939_66789128_66789320_66791003
ENSMUSG00000005125.14_0	chr15	-	2877	16	FSM	ENSMUSG00000005125.14	ENSMUST00000005256.14	2889	16	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGTGTCTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66841481	66801170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66802958_66805712_66805765_66808101_66808138_66809046_66809095_66809715_66809768_66810491_66810549_66811991_66812096_66813860_66813918_66814913_66815001_66815852_66815914_66816624_66816688_66818280_66818402_66820227_66820334_66831210_66831247_66832320_66832402_66841352
ENSMUSG00000005142.11_0	chr8	+	3798	24	FSM	ENSMUSG00000005142.11	ENSMUST00000034121.11	3822	24	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATGACCAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	85809956	85824900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85810118_85811029_85811133_85811269_85811444_85811983_85812178_85813439_85813573_85813800_85813947_85815182_85815300_85817546_85817630_85817712_85817834_85817901_85817981_85818139_85818250_85818466_85818575_85818693_85818811_85819460_85819650_85820547_85820646_85820734_85820853_85821748_85821868_85821954_85822057_85822167_85822256_85822359_85822441_85822899_85823128_85823334_85823491_85823580_85823684_85824030
ENSMUSG00000005148.9_0	chr14	+	2956	4	FSM	ENSMUSG00000005148.9	ENST00000539231.5	2976	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99532191	99552463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_99532337_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005148.9_4	chr14	+	3327	4	FSM	ENSMUSG00000005148.9	ENSMUST00000005279.8	3352	4	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATGTATGTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	99536142	99552463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_99536659_99538816_99539691_99540853_99540914_99550586
ENSMUSG00000005150.17_0	chr8	-	1226	9	FSM	ENSMUSG00000005150.17	ENSMUST00000093357.12	1238	9	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATCTTCTTAGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	85807368	85801668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85801973_85802451_85802567_85802652_85802762_85802845_85802914_85806209_85806337_85806417_85806467_85806748_85806855_85806941_85807063_85807141
ENSMUSG00000005161.16_0	chr8	+	1599	6	FSM	ENSMUSG00000005161.16	ENSMUST00000109734.8	1612	6	12	1	-12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACCTCTAGGCTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	85696227	85701462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85696392_85696780_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_2	chr8	+	1489	6	FSM	ENSMUSG00000005161.16	ENSMUST00000005292.15	1500	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCTAGGCTCTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	85696250	85701463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85696392_85696868_85696974_85697064_85697219_85697915_85698039_85698190_85698322_85700628
ENSMUSG00000005161.16_8	chr8	+	680	4	FSM	ENSMUSG00000005161.16	ENST00000334482.9	698	4	10	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGGGACAGTGTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	85696872	85700930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85696974_85697064_85697219_85697915_85698039_85700628
ENSMUSG00000005198.16_0	chr11	-	6733	29	FSM	ENSMUSG00000005198.16	ENSMUST00000058470.16	6740	29	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGTCTGTATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	69649463	69624829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69626393_69626475_69626626_69626726_69626841_69626964_69627152_69627600_69627805_69628007_69628191_69628273_69628379_69630252_69630354_69630704_69630952_69631082_69631308_69631824_69632031_69632462_69632569_69632666_69632839_69633199_69633384_69633512_69633736_69634079_69634284_69634416_69634512_69634628_69634798_69634876_69635087_69635422_69635634_69635745_69635871_69636394_69636528_69636747_69636969_69637092_69637255_69637523_69637806_69637930_69638105_69638201_69638339_69638806_69638940_69648956
ENSMUSG00000005202.3_0	chr11	-	688	5	FSM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508406	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507967_69508158_69508319
ENSMUSG00000005202.3_1	chr11	-	391	3	FSM	ENSMUSG00000005202.3	ENST00000572182.5	400	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508406	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69505943_69507967_69508158_69508319
ENSMUSG00000005202.3_2	chr11	-	787	6	FSM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508643	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967_69508158_69508319_69508412_69508574
ENSMUSG00000005202.3_3	chr11	-	848	6	FSM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508404	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507517_69507680_69507967_69508158_69508319
ENSMUSG00000005202.3_5	chr11	-	763	5	ISM	ENSMUSG00000005202.3	ENST00000574539.5	859	6	254	4	254	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507517_69507680_69507967
ENSMUSG00000005202.3_6	chr11	-	601	4	ISM	ENSMUSG00000005202.3	ENST00000576728.5	697	5	254	4	254	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508157	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69505943_69506857_69506995_69507162_69507323_69507967
ENSMUSG00000005202.3_7	chr11	-	716	5	ISM	ENSMUSG00000005202.3	ENST00000441599.6	794	6	237	4	2	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACCTAGCAACGATACC	NA	NA	NA	NA	NA	NA	NA	NA	69508409	69505828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69505943_69507162_69507323_69507517_69507680_69507967_69508158_69508319
ENSMUSG00000005204.13_0	chr11	-	2291	11	FSM	ENSMUSG00000005204.13	ENSMUST00000005336.9	2313	11	16	6	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	69572656	69563946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572488
ENSMUSG00000005204.13_2	chr11	-	2204	11	FSM	ENSMUSG00000005204.13	ENSMUST00000066760.8	2219	11	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATATGCAAGTGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	69572895	69563946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69564463_69564872_69564924_69565027_69565112_69565294_69565433_69567915_69567994_69568798_69568847_69568962_69569111_69569447_69569560_69569647_69569888_69570968_69571677_69572814
ENSMUSG00000005220.11_0	chr5	-	2709	18	FSM	ENSMUSG00000005220.11	ENST00000502252.5	2739	18	25	5	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGTGGGGAAACCTACA	NA	NA	NA	NA	NA	NA	NA	NA	72592757	72458822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_72459024_72460133_72460268_72462217_72462490_72473366_72473585_72476864_72476979_72486954_72487085_72488153_72488265_72490010_72490125_72496303_72496412_72497183_72497330_72500222_72500461_72511212_72511321_72514218_72514336_72515716_72515828_72517993_72518102_72529440_72529555_72579367_72579553_72592577
ENSMUSG00000005225.16_0	chr6	+	6717	14	FSM	ENSMUSG00000005225.16	ENSMUST00000119706.8	6739	14	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTTTTGTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	54572109	54622816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54572457_54590076_54590194_54592199_54592356_54593617_54593743_54596178_54596338_54597256_54597298_54599105_54599264_54601059_54601217_54601537_54601624_54605830_54605890_54606804_54606936_54607488_54607560_54612694_54612757_54617768
ENSMUSG00000005232.12_0	chr2	+	473	2	FSM	ENSMUSG00000005232.12	ENST00000421979.1	492	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACTCAGAAATGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	69050381	69057171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69050595_69056911
ENSMUSG00000005233.17_0	chr2	-	1343	7	FSM	ENSMUSG00000005233.17	ENSMUST00000005365.15	1352	7	8	1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69036530	69024239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036407
ENSMUSG00000005233.17_1	chr2	-	1516	7	FSM	ENSMUSG00000005233.17	ENSMUST00000112320.8	1527	7	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGTAACTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69036469	69024239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69024890_69027478_69027578_69030328_69030434_69032915_69033063_69035199_69035266_69035369_69035523_69036173
ENSMUSG00000005237.15_0	chr11	-	13541	85	FSM	ENSMUSG00000005237.15	ENSMUST00000035539.12	13569	85	20	8	20	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAGCCCCAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	69435362	69311642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69311974_69312095_69312247_69312387_69312463_69312555_69312733_69313344_69313460_69313581_69313734_69313806_69314036_69314332_69314518_69314689_69314882_69320127_69320319_69321299_69321484_69321575_69321725_69321884_69322072_69323679_69323807_69326029_69326230_69326379_69326525_69326658_69326793_69326963_69327113_69327309_69327461_69327606_69327674_69327747_69327897_69327996_69328123_69328622_69328788_69337104_69337222_69337400_69337571_69338621_69338764_69338939_69339057_69339217_69339429_69341824_69341965_69342047_69342181_69343232_69343373_69343643_69343805_69343986_69344155_69344601_69344752_69344887_69345019_69345153_69345240_69346616_69346806_69348166_69348272_69348811_69349037_69349185_69349385_69349691_69349784_69349973_69350127_69354141_69354301_69354388_69354527_69355745_69355883_69356097_69356216_69356406_69356626_69364177_69364304_69364545_69364699_69365025_69365154_69366291_69366473_69367153_69367344_69367441_69367546_69367985_69368175_69368488_69368582_69368850_69368977_69369548_69369651_69370270_69370489_69374063_69374203_69374520_69374702_69374809_69374893_69375018_69375176_69377784_69377889_69377997_69378160_69382328_69382493_69382945_69383121_69383481_69383639_69383930_69384132_69385897_69386091_69387334_69387483_69388639_69388829_69389337_69389578_69389930_69390088_69391537_69391685_69405501_69405717_69406446_69406630_69406807_69406938_69407300_69407507_69409101_69409294_69411537_69411777_69411915_69412027_69414999_69415229_69420208_69420380_69430223_69430391_69435202
ENSMUSG00000005262.14_0	chr16	+	2070	13	FSM	ENSMUSG00000005262.14	ENSMUST00000115578.10	2078	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCGCCTCTAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	18630581	18653998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18630634_18631008_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005262.14_7	chr16	+	1996	12	FSM	ENSMUSG00000005262.14	ENSMUST00000005394.13	1996	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGATATGGTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18631043	18654011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18631168_18633579_18633713_18634078_18634112_18636652_18636775_18639788_18639920_18641972_18642046_18643737_18643807_18644502_18644569_18645004_18645053_18645767_18645857_18646385_18646468_18652985
ENSMUSG00000005267.14_0	chr11	-	1577	8	FSM	ENSMUSG00000005267.14	ENSMUST00000150336.8	1605	8	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGATATTTCTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	62622687	62591185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62591453_62596294_62596418_62602975_62603046_62615622_62615710_62616073_62616201_62618375_62618480_62619107_62619712_62622492
ENSMUSG00000005267.14_1	chr11	-	3211	5	FSM	ENSMUSG00000005267.14	ENSMUST00000005399.10	3220	5	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGAAGGAAGACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	62619912	62604114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62606203_62615622_62615710_62616073_62616201_62618375_62618480_62619107
ENSMUSG00000005268.21_0	chr15	+	1212	8	FSM	ENSMUSG00000005268.21	ENST00000619676.4	1225	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAGCTAGACTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	10317595	10329348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10317722_10319260_10319431_10322471_10322642_10325356_10325499_10325952_10326053_10326561_10326632_10328366_10328521_10329068
ENSMUSG00000005299.7_0	chr5	-	5264	14	FSM	ENSMUSG00000005299.7	ENSMUST00000005431.6	5272	14	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTACAGTGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	33940154	33897017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33899957_33900985_33901125_33902359_33902548_33903583_33903719_33904719_33904855_33905504_33905646_33906085_33906218_33909835_33909956_33918066_33918271_33918923_33919062_33919802_33919947_33926704_33927156_33935951_33936013_33939817
ENSMUSG00000005312.16_0	chr13	-	3669	11	FSM	ENSMUSG00000005312.16	ENSMUST00000058735.12	3686	11	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	58363457	58323976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58328635_58328720_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005312.16_4	chr13	-	3550	10	FSM	ENSMUSG00000005312.16	ENSMUST00000076454.8	3561	10	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGTTGTCTCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	58363422	58323976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58325843_58327041_58327208_58327366_58327483_58330995_58331139_58339535_58339780_58339890_58340050_58341065_58341329_58344370_58344487_58346732_58346885_58363097
ENSMUSG00000005320.10_0	chr13	+	3313	18	FSM	ENSMUSG00000005320.10	ENSMUST00000005452.6	3324	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTGGCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55300463	55316572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55300741_55303250_55303385_55304043_55304308_55304398_55304480_55304586_55304754_55306906_55307031_55307735_55307927_55308061_55308201_55308928_55309123_55309206_55309353_55309434_55309557_55313702_55313814_55313908_55314100_55314670_55314794_55314900_55314972_55315212_55315351_55315618_55315725_55315838
ENSMUSG00000005354.17_0	chr15	-	1283	4	FSM	ENSMUSG00000005354.17	ENSMUST00000005487.12	1298	4	8	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCACTGGCTGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77813198	77799253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77800058_77808742_77808867_77811891_77812155_77813106
ENSMUSG00000005354.17_1	chr15	-	1193	3	FSM	ENSMUSG00000005354.17	ENSMUST00000109748.9	2049	3	1012	-156	1012	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCACTGGCTGCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	77812156	77799253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77800058_77808742_77808867_77811891
ENSMUSG00000005355.10_0	chr10	-	685	5	FSM	ENSMUSG00000005355.10	ENST00000427043.4	702	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAGAGGGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	78551237	78549175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78549276_78549823_78549928_78550081_78550194_78550768_78550995_78551094
ENSMUSG00000005357.10_0	chr10	+	2012	10	FSM	ENSMUSG00000005357.10	ENSMUST00000005490.10	2029	10	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAGGTATCCAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	78616336	78650589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_78616516_78623595_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631757_78632102_78635862_78636097_78637635_78637831_78648635_78648771_78650253
ENSMUSG00000005357.10_1	chr10	+	932	5	ISM	ENSMUSG00000005357.10	ENST00000598504.5	946	6	1519	3	1519	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGTGGGTGAGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78623599	78632104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_78623799_78624792_78624931_78626998_78627204_78629123_78629167_78631757
ENSMUSG00000005360.15_1	chr15	-	4144	10	FSM	ENSMUSG00000005360.15	ENSMUST00000005493.14	4163	10	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATACATTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	8740236	8663614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_8665824_8668539_8668675_8671665_8671861_8672383_8672618_8675143_8675437_8679026_8679070_8680332_8680538_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_3	chr15	-	718	5	FSM	ENSMUSG00000005360.15	ENSMUST00000157065.2	728	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCCGAGACTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8739889	8715505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_8715639_8717194_8717297_8717771_8717910_8738045_8738324_8739822
ENSMUSG00000005360.15_4	chr15	-	654	4	ISM	ENSMUSG00000005360.15	ENSMUST00000157065.2	728	5	1573	0	1573	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGACTTTCCTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8738320	8715499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_8715639_8717194_8717297_8717771_8717910_8738045
ENSMUSG00000005362.15_0	chr6	-	1986	10	ISM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4070	12	4070	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGAATAGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106772956	106757173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842
ENSMUSG00000005362.15_1	chr6	-	2067	11	FSM	ENSMUSG00000005362.15	ENSMUST00000113239.10	2084	11	5	12	-4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGAATAGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106777030	106757173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772959_106776951
ENSMUSG00000005362.15_2	chr6	-	2056	11	FSM	ENSMUSG00000005362.15	ENSMUST00000013882.10	2072	11	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGAATAGGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106777022	106757173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_106758072_106758663_106758796_106759423_106759489_106759871_106759988_106760385_106760471_106761377_106761441_106767792_106767953_106771148_106771299_106771955_106772159_106772842_106772956_106776951
ENSMUSG00000005370.5_1	chr17	+	4232	10	FSM	ENSMUSG00000005370.5	ENST00000234420.11	4241	10	0	9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	88282492	88298311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88282823_88287618_88287819_88290872_88291047_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_10	chr17	+	4230	10	FSM	ENSMUSG00000005370.5	ENSMUST00000005503.5	4251	10	12	9	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGACCATTTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	88282501	88298311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88282834_88287618_88287819_88290872_88291043_88291873_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005370.5_36	chr17	+	3873	9	FSM	ENSMUSG00000005370.5	ENST00000538136.1	3890	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAAATGACCATT	NA	NA	NA	NA	NA	NA	NA	NA	88287632	88298305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88287819_88290872_88291047_88291882_88294410_88295613_88295883_88296571_88296690_88296854_88296945_88297621_88297777_88297858_88298059_88298151
ENSMUSG00000005371.16_0	chr17	-	3687	22	ISM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	49355	7	49355	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAATGTTGTCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	88323101	88298293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015
ENSMUSG00000005371.16_1	chr17	-	3996	23	FSM	ENSMUSG00000005371.16	ENSMUST00000005504.15	4019	23	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATAATGTTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	88372705	88298295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321979_88322826_88322909_88323015_88323141_88372436
ENSMUSG00000005371.16_2	chr17	-	3744	23	FSM	ENSMUSG00000005371.16	ENSMUST00000130379.9	3753	23	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCATAATGTTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	88372456	88298295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_88299604_88299685_88299785_88300246_88300356_88300574_88300683_88301164_88301276_88303463_88303608_88303694_88303772_88304758_88304845_88304940_88305064_88306960_88307056_88308199_88308286_88310179_88310398_88316021_88316160_88316243_88316351_88316437_88316550_88316631_88316739_88318363_88318497_88318720_88318805_88319984_88320115_88321833_88321976_88322826_88322909_88323015_88323141_88372436
ENSMUSG00000005374.14_0	chr5	+	7474	7	FSM	ENSMUSG00000005374.14	ENSMUST00000153183.8	7488	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATGTGAGTGAGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	135178517	135194607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135178719_135181788_135181911_135183167_135183353_135185221_135185374_135186385_135186513_135187457_135187611_135188073
ENSMUSG00000005378.18_0	chr5	-	1497	13	FSM	ENSMUSG00000005378.18	ENSMUST00000085984.11	1516	13	13	6	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACTGGTGTCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	135093507	135081816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135092737_135092776_135092867_135093030_135093377
ENSMUSG00000005378.18_1	chr5	-	1588	11	FSM	ENSMUSG00000005378.18	ENSMUST00000071677.10	1607	11	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAACTGGTGTCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	135093798	135081816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135082279_135082402_135082493_135084881_135084941_135085192_135085239_135085695_135085782_135086473_135086525_135087960_135088058_135089587_135089685_135089926_135090010_135090102_135090199_135093377
ENSMUSG00000005397.9_0	chr13	+	6069	20	FSM	ENSMUSG00000005397.9	ENSMUST00000005532.9	6091	20	7	15	7	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAATCTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13612142	13686839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_13612512_13638306_13638607_13639894_13640122_13642815_13643193_13647364_13647515_13650743_13650996_13652722_13652924_13656602_13656849_13658234_13658379_13661223_13661350_13663590_13663741_13664629_13664753_13674143_13674372_13675030_13675204_13676983_13677111_13680920_13681093_13682194_13682353_13683302_13683427_13684017_13684131_13684530
ENSMUSG00000005410.7_0	chr8	+	3378	17	FSM	ENSMUSG00000005410.7	ENSMUST00000164309.3	3381	17	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGCCTGGCTGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75836196	75855064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75836250_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_10	chr8	+	3322	16	FSM	ENSMUSG00000005410.7	ENSMUST00000212811.2	2653	16	78	-747	78	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTGGCTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75836329	75855063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005410.7_9	chr8	+	2596	17	FSM	ENSMUSG00000005410.7	ENSMUST00000212426.2	2604	17	0	8	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGATAGTAGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75836203	75854313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75836226_75836327_75836503_75836717_75836845_75836927_75837057_75839171_75839345_75840792_75840949_75842479_75842647_75844149_75844322_75845884_75845997_75847407_75847552_75847839_75847906_75848165_75848343_75849619_75849733_75850468_75850598_75851428_75851572_75852864_75852993_75853850
ENSMUSG00000005413.9_0	chr8	+	1554	5	FSM	ENSMUSG00000005413.9	ENSMUST00000005548.8	1569	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTAGAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75820256	75827210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75820401_75822483_75822605_75823477_75823970_75825393_75825494_75826513
ENSMUSG00000005417.18_0	chr11	+	8704	23	FSM	ENSMUSG00000005417.18	ENSMUST00000072031.13	8718	23	14	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCATATGGCTGCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	59553334	59671686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59666341
ENSMUSG00000005417.18_1	chr11	+	7745	23	FSM	ENSMUSG00000005417.18	ENSMUST00000066330.15	7765	23	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCCCGGCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	59553345	59667042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59648349_59652154_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59666341
ENSMUSG00000005417.18_10	chr11	+	8171	24	FSM	ENSMUSG00000005417.18	ENST00000651222.2	8184	24	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTCGTGCCTCCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	59553412	59667073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628409_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59648349_59652154_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59666341
ENSMUSG00000005417.18_2	chr11	+	4005	24	FSM	ENSMUSG00000005417.18	ENSMUST00000108751.8	4021	24	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAAGCCCCGGCCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	59553341	59667042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626769_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUSG00000005417.18_4	chr11	+	8748	24	FSM	ENSMUSG00000005417.18	ENSMUST00000116371.8	8766	24	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCCTCTGCATGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	59553345	59671675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59553775_59586951_59587030_59587783_59587850_59618377_59618530_59622333_59622419_59626655_59626891_59627897_59628055_59631945_59632088_59632816_59632925_59634596_59634654_59635577_59635647_59639372_59639463_59640344_59640455_59643315_59643887_59645818_59645936_59655205_59655354_59656233_59656352_59657553_59657714_59658780_59658901_59660038_59660126_59660709_59660873_59662442_59662529_59662977_59663044_59666341
ENSMUSG00000005442.14_17	chr7	+	2089	11	FSM	ENSMUSG00000005442.14	ENST00000455800.1	2098	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984282	24992506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987896_24991997_24992207_24992380
ENSMUSG00000005442.14_2	chr7	+	2079	12	FSM	ENSMUSG00000005442.14	ENST00000629111.1	2082	12	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24982277	24992506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24982342_24984273_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987896_24992074_24992213_24992392
ENSMUSG00000005442.14_23	chr7	+	1979	11	FSM	ENSMUSG00000005442.14	ENST00000605013.1	1983	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGGTCAGGAAGGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	24984337	24992506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24984424_24984503_24984739_24984834_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498_24987930_24992086_24992207_24992380
ENSMUSG00000005442.14_69	chr7	+	1317	7	FSM	ENSMUSG00000005442.14	ENST00000432801.1	1319	7	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGGGAGGAAACCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24984894	24987894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24984965_24985058_24985242_24985353_24985489_24986231_24986435_24986525_24986752_24987174_24987279_24987498
ENSMUSG00000005447.13_0	chr7	-	890	6	FSM	ENSMUSG00000005447.13	ENSMUST00000005583.12	901	6	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTTTCTGCTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	24997400	24994473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24994802_24995545_24995669_24995745_24995863_24996510_24996601_24996796_24996896_24997267
ENSMUSG00000005465.10_0	chr8	-	2653	14	FSM	ENSMUSG00000005465.10	ENSMUST00000005601.9	2664	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCCAGAGTGCCTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	84769207	84756922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84757822_84757941_84758051_84758147_84758239_84758645_84758772_84760579_84760739_84760820_84760923_84762713_84762903_84762991_84763176_84765924_84765999_84766106_84766264_84767302_84767461_84767560_84767719_84768715_84768834_84769078
ENSMUSG00000005469.11_0	chr8	+	2256	10	FSM	ENSMUSG00000005469.11	ENSMUST00000005606.8	2276	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAAGTGTCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	84699633	84723064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84699862_84707402_84707465_84707800_84707930_84713465_84713565_84714911_84714995_84717056_84717184_84717270_84717367_84717491_84717615_84721423_84721589_84721920
ENSMUSG00000005470.9_0	chr8	+	1770	4	FSM	ENSMUSG00000005470.9	ENSMUST00000005607.9	1788	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGATTGTTTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84682146	84696819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84682567_84691659_84691776_84694462_84694640_84695762
ENSMUSG00000005470.9_2	chr8	+	439	3	FSM	ENSMUSG00000005470.9	ENST00000592798.5	452	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACAGGGGAGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84682444	84695963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84682567_84691659_84691776_84695762
ENSMUSG00000005481.19_0	chr8	+	1641	11	FSM	ENSMUSG00000005481.19	ENSMUST00000019576.15	1656	11	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAAACGTGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84441817	84449974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84441967_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000005481.19_10	chr8	+	1777	11	FSM	ENSMUSG00000005481.19	ENSMUST00000109810.2	1794	11	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCAAACGTGCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	84442190	84449974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84442476_84446015_84446228_84446440_84446569_84447177_84447271_84447585_84447770_84448362_84448482_84448858_84448991_84449077_84449188_84449277_84449423_84449515_84449664_84449753
ENSMUSG00000005483.11_0	chr8	+	2983	3	FSM	ENSMUSG00000005483.11	ENSMUST00000005620.10	2996	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACATACGAGGTGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	84334832	84339280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84335172_84336442_84337024_84337217
ENSMUSG00000005501.15_0	chr1	-	5044	28	FSM	ENSMUSG00000005501.15	ENSMUST00000040783.11	5049	28	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTCATATACTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87936268	87872842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87874430_87876223_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890211_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUSG00000005501.15_18	chr1	-	3663	30	FSM	ENSMUSG00000005501.15	ENST00000678225.1	3682	30	8	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAACCAGAAGCGGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	87936250	87876261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916715_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946_87935165_87936159
ENSMUSG00000005501.15_20	chr1	-	3563	29	FSM	ENSMUSG00000005501.15	ENST00000450966.5	3587	29	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGAACCAGAAGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	87935162	87876265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87876319_87877653_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916712_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946
ENSMUSG00000005501.15_54	chr1	-	3502	28	FSM	ENSMUSG00000005501.15	ENST00000427112.6	3519	28	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGTGGGTTAAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	87935160	87877659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87877750_87877880_87878092_87879364_87879431_87880061_87880181_87881872_87881968_87884932_87885057_87887510_87887586_87890145_87890243_87894905_87894993_87895231_87895321_87896117_87896172_87901798_87901857_87903529_87903654_87906032_87906356_87907736_87907808_87908692_87908778_87909730_87909903_87911475_87911558_87913623_87913922_87916606_87916712_87917783_87917880_87921895_87922025_87923432_87923577_87925534_87925682_87927461_87927627_87930130_87930245_87931968_87932037_87934946
ENSMUSG00000005505.13_0	chr2	+	2337	4	FSM	ENSMUSG00000005505.13	ENSMUST00000111464.8	2343	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATTTGTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90735083	90740899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90735157_90736009_90736628_90737888_90737996_90739360
ENSMUSG00000005505.13_1	chr2	+	2423	4	FSM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATTTGTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90735094	90740899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90735254_90736009_90736628_90737888_90737996_90739360
ENSMUSG00000005505.13_3	chr2	+	2268	3	ISM	ENSMUSG00000005505.13	ENSMUST00000090682.4	2437	4	919	6	919	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATTTGTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90736005	90740899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_90736628_90737888_90737996_90739360
ENSMUSG00000005506.17_0	chr2	+	4824	15	FSM	ENSMUSG00000005506.17	ENSMUST00000005643.14	4830	15	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90770747	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90770987_90818009_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUSG00000005506.17_16	chr2	+	7596	14	FSM	ENSMUSG00000005506.17	ENSMUST00000068747.14	7614	14	11	7	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90770898	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUSG00000005506.17_2	chr2	+	4668	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111451.10	4678	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90770751	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUSG00000005506.17_24	chr2	+	7790	13	FSM	ENSMUSG00000005506.17	ENSMUST00000111452.8	7800	13	3	7	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90817967	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582
ENSMUSG00000005506.17_26	chr2	+	7576	14	FSM	ENSMUSG00000005506.17	ENSMUST00000111455.9	7579	14	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGAACTGTTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90818092	90849834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90818162_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUSG00000005506.17_29	chr2	+	7509	13	ISM	ENSMUSG00000005506.17	ENSMUST00000111455.9	7579	14	10833	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90828923	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUSG00000005506.17_30	chr2	+	4432	13	FSM	ENSMUSG00000005506.17	ENSMUST00000111449.8	4441	13	2	7	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90828925	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90846910
ENSMUSG00000005506.17_5	chr2	+	7801	15	FSM	ENSMUSG00000005506.17	ENSMUST00000177642.8	7806	15	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90770746	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90770987_90784633_90784687_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839549_90839661_90840737_90840924_90843043_90843188_90843582_90843748_90843835
ENSMUSG00000005506.17_6	chr2	+	7831	13	FSM	ENSMUSG00000005506.17	ENSMUST00000068726.13	7851	13	13	7	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGTTTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	90770754	90849835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90770987_90828924_90829113_90831350_90831434_90831806_90831856_90833555_90833691_90834155_90834236_90835045_90835208_90836964_90837041_90838516_90838646_90839546_90839661_90840737_90840924_90843043_90843188_90843582
ENSMUSG00000005510.10_0	chr2	-	1029	7	FSM	ENSMUSG00000005510.10	ENSMUST00000005647.4	1046	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTCTCTCCTTCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90735160	90724985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90725222_90728727_90728848_90728980_90729107_90732706_90732857_90733190_90733289_90734766_90734833_90734927
ENSMUSG00000005510.10_4	chr2	-	449	3	FSM	ENSMUSG00000005510.10	ENST00000534208.5	456	3	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGTCCCAACTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	90734832	90732740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90732956_90733120_90733289_90734766
ENSMUSG00000005510.10_5	chr2	-	378	2	ISM	ENSMUSG00000005510.10	ENST00000534208.5	456	3	1552	4	1552	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATGTCCCAACTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	90733283	90732740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_90732956_90733120
ENSMUSG00000005514.15_0	chr5	+	2625	16	FSM	ENSMUSG00000005514.15	ENSMUST00000005651.13	2636	16	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	135717899	135764179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763383_135763474_135763561_135763666
ENSMUSG00000005514.15_5	chr5	+	2585	15	FSM	ENSMUSG00000005514.15	ENSMUST00000122113.8	2606	15	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGGTGTTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	135718031	135764179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135718107_135744725_135744918_135757515_135757565_135758252_135758382_135759082_135759233_135759697_135759823_135759946_135760037_135760416_135760516_135761336_135761454_135761539_135761659_135762355_135762538_135762626_135762777_135762880_135763152_135763236_135763561_135763666
ENSMUSG00000005533.11_0	chr7	+	11396	21	FSM	ENSMUSG00000005533.11	ENSMUST00000005671.10	11409	21	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACCTTTGTCTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	67602582	67883411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_67602701_67653557_67654104_67814740_67815054_67819644_67819797_67822978_67823124_67833091_67833307_67834478_67834606_67836737_67836977_67839320_67839489_67839693_67839899_67843094_67843379_67844716_67844854_67845337_67845498_67850991_67851095_67851649_67851721_67856998_67857229_67857510_67857622_67861741_67861905_67864666_67864797_67868149_67868285_67875767
ENSMUSG00000005534.11_0	chr8	-	9345	21	FSM	ENSMUSG00000005534.11	ENSMUST00000091291.5	9355	21	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTATTTTTTGTGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3329613	3200927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_3206024_3208695_3208831_3209452_3209583_3211338_3211499_3211680_3211792_3213236_3213482_3215517_3215586_3217501_3217605_3219708_3219869_3223479_3223620_3224613_3224889_3234950_3235153_3239124_3239293_3242545_3242803_3244794_3244922_3248060_3248276_3252889_3253035_3254629_3254779_3261378_3261701_3308382_3308935_3329028
ENSMUSG00000005566.15_1	chr7	+	3226	17	FSM	ENSMUSG00000005566.15	ENSMUST00000005705.8	3245	17	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGCTCATGCCTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	12758093	12764958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763133_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_11	chr7	+	2557	15	FSM	ENSMUSG00000005566.15	ENST00000341753.10	2582	15	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTCACTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	12758502	12764941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12758989_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763130_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005566.15_6	chr7	+	3051	17	FSM	ENSMUSG00000005566.15	ENST00000253024.10	3070	17	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTCACTGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	12758254	12764941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12758989_12759230_12759344_12759570_12759704_12761543_12761680_12761759_12761877_12761947_12762063_12762334_12762482_12762590_12762706_12762807_12762915_12763014_12763052_12763130_12763180_12763269_12763523_12763602_12763923_12764009_12764134_12764215_12764303_12764381_12764520_12764615
ENSMUSG00000005575.17_0	chr7	-	1210	7	FSM	ENSMUSG00000005575.17	ENSMUST00000165394.9	1228	7	15	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAATGGAAGAATCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12772187	12769049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547_12771633_12771996
ENSMUSG00000005575.17_3	chr7	-	1454	6	FSM	ENSMUSG00000005575.17	ENSMUST00000005714.14	1472	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCATGGCCTCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	12772188	12769170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12769682_12769768_12769833_12770138_12770243_12770360_12770400_12770492_12770588_12771547
ENSMUSG00000005580.12_0	chr16	-	4952	12	FSM	ENSMUSG00000005580.12	ENSMUST00000120080.8	4974	12	3	19	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4238359	4105411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716_4236837_4237059_4237453_4237639
ENSMUSG00000005580.12_1	chr16	-	4446	10	FSM	ENSMUSG00000005580.12	ENSMUST00000005719.4	4457	10	8	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4237443	4105411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4106954_4112526_4112569_4115272_4115422_4116550_4116711_4122240_4122450_4125019_4125123_4129388_4129607_4130548_4130654_4141630_4141822_4235716
ENSMUSG00000005583.17_0	chr13	+	4422	11	FSM	ENSMUSG00000005583.17	ENST00000625674.2	4440	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGATCATATAAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	83652366	83813413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_83652496_83668503_83668600_83723656_83723850_83740896_83741101_83773588_83773727_83781173_83781361_83783540_83783589_83800932_83801106_83803625_83803756_83804335_83804472_83810425
ENSMUSG00000005583.17_16	chr13	+	3374	11	FSM	ENSMUSG00000005583.17	ENST00000637732.1	3397	11	15	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGAAATTTAACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	83672989	83812537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_83673109_83723656_83723850_83740896_83741101_83773383_83773528_83781173_83781361_83783540_83783589_83800932_83801106_83802716_83802741_83803625_83803756_83804335_83804472_83810521
ENSMUSG00000005609.17_0	chr7	+	4282	25	FSM	ENSMUSG00000005609.17	ENSMUST00000005749.6	4300	25	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCATGCGAGTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110628167	110655576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_110628389_110629420_110629520_110632897_110633138_110633554_110633673_110634494_110634585_110637592_110637742_110639761_110639870_110642022_110642131_110642232_110642470_110642623_110642714_110642820_110642950_110643042_110643227_110644583_110644673_110645460_110645647_110645722_110645811_110645969_110646119_110648470_110648588_110648716_110648863_110649640_110649713_110650151_110650288_110650656_110650804_110651508_110651667_110652588_110652686_110653020_110653134_110654565
ENSMUSG00000005610.18_0	chr7	-	7987	22	FSM	ENSMUSG00000005610.18	ENSMUST00000162415.9	7995	22	8	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAGAGAAGAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	110682229	110666956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675486_110675601_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005610.18_20	chr7	-	3540	22	FSM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGATGTAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	110682224	110671146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991_110682031_110682168
ENSMUSG00000005610.18_21	chr7	-	3483	21	ISM	ENSMUSG00000005610.18	ENSMUST00000161051.8	3548	22	195	8	195	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGATGTAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	110682029	110671146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_110671965_110673035_110673158_110673244_110673457_110673546_110673752_110673886_110674146_110674232_110674449_110674543_110674649_110674793_110674920_110675902_110676064_110676144_110676284_110676431_110676531_110676615_110676700_110676843_110676955_110677231_110677384_110677479_110677547_110677628_110677761_110678499_110678603_110679388_110679530_110680105_110680172_110680713_110680841_110681991
ENSMUSG00000005611.16_0	chr7	-	3014	20	FSM	ENSMUSG00000005611.16	ENST00000558540.5	3023	20	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAGGGGAAAGTGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	110581306	110470257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_110470810_110476045_110476184_110477348_110477469_110484962_110485028_110487147_110487256_110487740_110487791_110495000_110495143_110498112_110498245_110498880_110499022_110501459_110501491_110504633_110504758_110520520_110520600_110522667_110523280_110523518_110523567_110523741_110523795_110524461_110524540_110525549_110525724_110527007_110527079_110545039_110545189_110581159
ENSMUSG00000005615.16_0	chr16	+	4781	9	FSM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTGGTTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	32249749	32293888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32249850_32270522_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUSG00000005615.16_2	chr16	+	4683	8	ISM	ENSMUSG00000005615.16	ENSMUST00000079791.11	4789	9	20779	0	20454	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCCTGTGGTTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	32270520	32293888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_32270650_32274029_32274130_32280818_32280936_32281848_32282001_32285257_32285337_32285895_32286039_32288868_32289058_32290114
ENSMUSG00000005621.12_0	chr7	+	7289	10	FSM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATCCGTCATGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80643430	80694906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80643511_80659181_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ENSMUSG00000005621.12_1	chr7	+	7206	9	ISM	ENSMUSG00000005621.12	ENSMUST00000107353.3	7297	10	15756	6	15756	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATCCGTCATGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80659184	80694906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_80659288_80673018_80675258_80679196_80679376_80687097_80687275_80687552_80687713_80687811_80688100_80688300_80688414_80688877_80689014_80691095
ENSMUSG00000005625.16_0	chr3	-	1324	10	FSM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGTGATAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94949917	94940004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUSG00000005625.16_1	chr3	-	1226	9	ISM	ENSMUSG00000005625.16	ENSMUST00000107237.8	1332	10	5868	0	5797	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAATAGTGATAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94944057	94940004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941228_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915
ENSMUSG00000005625.16_8	chr3	-	1276	10	FSM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94949863	94940007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915_94944057_94949818
ENSMUSG00000005625.16_9	chr3	-	1225	9	ISM	ENSMUSG00000005625.16	ENSMUST00000071664.12	1276	10	5813	0	5804	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTCAAATAGTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	94944050	94940007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_94940296_94940792_94940858_94940943_94941076_94941219_94941338_94941876_94942093_94942252_94942322_94942548_94942636_94943120_94943236_94943915
ENSMUSG00000005649.18_0	chr7	+	404	4	FSM	ENSMUSG00000005649.18	ENST00000293255.3	421	4	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	13132102	13142421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_13132296_13134629_13134661_13135155_13135243_13142328
ENSMUSG00000005656.10_0	chr12	-	1923	14	FSM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTACAGTGAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54842488	54793138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238_54842287_54842432
ENSMUSG00000005656.10_1	chr12	-	1864	13	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	205	5	-16	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTACAGTGAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54842283	54793138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799_54830905_54842238
ENSMUSG00000005656.10_2	chr12	-	1819	12	ISM	ENSMUSG00000005656.10	ENSMUST00000005798.9	1928	14	11584	5	11363	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTTACAGTGAAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54830904	54793138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_54793845_54798566_54798653_54798725_54798886_54801074_54801162_54803820_54803861_54807183_54807260_54810404_54810511_54812368_54812465_54814803_54814928_54817503_54817626_54830187_54830299_54830799
ENSMUSG00000005667.9_0	chr6	-	2070	8	FSM	ENSMUSG00000005667.9	ENSMUST00000005810.9	2085	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTCTTGTCTCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	83294576	83282675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83283792_83285914_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290343_83290529_83294410
ENSMUSG00000005667.9_4	chr6	-	770	6	FSM	ENSMUSG00000005667.9	ENST00000515074.1	783	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATTTAGTGTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	83290509	83285917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83286041_83286443_83286537_83287393_83287502_83288191_83288345_83288793_83288917_83290339
ENSMUSG00000005674.10_26	chr1	-	4697	10	FSM	ENSMUSG00000005674.10	ENSMUST00000005817.9	4712	10	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGGCTCTGAGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	171050076	171043587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472_171049723_171049943
ENSMUSG00000005674.10_27	chr1	-	2799	9	FSM	ENSMUSG00000005674.10	ENSMUST00000111327.8	2812	9	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGGAGCTCAGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	171049747	171045377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171047230_171047362_171047466_171047677_171047755_171047869_171047993_171048115_171048222_171048373_171048476_171048736_171048830_171049140_171049209_171049472
ENSMUSG00000005677.15_0	chr1	+	895	7	FSM	ENSMUSG00000005677.15	ENST00000367980.6	910	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171041952	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042055_171042512_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171044865_171045000_171045181
ENSMUSG00000005677.15_1	chr1	+	356	3	FSM	ENSMUSG00000005677.15	ENST00000511944.5	367	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATGGAGGACGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	171041951	171044766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042055_171042512_171042644_171044644
ENSMUSG00000005677.15_11	chr1	+	324	3	FSM	ENSMUSG00000005677.15	ENST00000508387.5	340	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171042524	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042644_171044644_171044791_171045194
ENSMUSG00000005677.15_2	chr1	+	885	7	FSM	ENSMUSG00000005677.15	ENST00000367982.8	897	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171041949	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042055_171042512_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171044865_171045000_171045194
ENSMUSG00000005677.15_4	chr1	+	751	6	FSM	ENSMUSG00000005677.15	ENST00000367984.8	763	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171041949	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042055_171042512_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171045194
ENSMUSG00000005677.15_6	chr1	+	242	2	FSM	ENSMUSG00000005677.15	ENST00000511748.5	254	2	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGATGGAGGACGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	171042523	171044766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042644_171044644
ENSMUSG00000005677.15_7	chr1	+	785	6	FSM	ENSMUSG00000005677.15	ENST00000412844.6	797	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171042520	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171044865_171045000_171045181
ENSMUSG00000005677.15_9	chr1	+	635	5	FSM	ENSMUSG00000005677.15	ENST00000504010.5	650	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGAACAACCACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	171042523	171045253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171042644_171043947_171044118_171044314_171044455_171044644_171044791_171045194
ENSMUSG00000005682.10_1	chr10	+	4379	26	FSM	ENSMUSG00000005682.10	ENST00000440411.7	4398	26	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAAAAGTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	128139218	128157189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150186_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151112_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_2	chr10	+	4445	26	FSM	ENSMUSG00000005682.10	ENST00000610546.4	4458	26	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTGATTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	128139223	128157248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128139341_128139963_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151112_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_56	chr10	+	4519	26	FSM	ENSMUSG00000005682.10	ENST00000548043.5	4539	26	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAAAAGTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	128139474	128157189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128139730_128139968_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151112_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005682.10_81	chr10	+	4261	25	FSM	ENSMUSG00000005682.10	ENST00000425394.7	4282	25	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAAAAGTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	128139971	128157189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128140363_128143933_128144104_128144204_128144326_128144472_128144551_128144905_128145174_128146039_128146383_128146572_128146670_128148746_128148864_128149009_128149130_128149483_128149613_128149710_128149911_128150048_128150198_128150316_128150424_128150594_128150694_128150791_128150863_128150966_128151112_128151382_128151527_128151644_128151705_128152299_128152391_128153502_128153661_128153758_128153903_128154031_128154212_128154813_128154908_128156116_128156315_128156602
ENSMUSG00000005683.9_0	chr10	+	2906	11	FSM	ENSMUSG00000005683.9	ENSMUST00000005826.9	2926	11	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	5166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACAATGTTTGAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	128173612	128198338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128173829_128185621_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUSG00000005683.9_7	chr10	+	1851	11	FSM	ENSMUSG00000005683.9	ENST00000542324.6	1861	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTAGATCTGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	128173669	128197261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128173854_128185567_128185673_128186301_128186410_128187067_128187134_128188542_128188675_128188891_128189081_128194202_128194403_128195038_128195169_128195302_128195405_128195812_128196023_128196836
ENSMUSG00000005686.18_0	chr7	+	4077	15	FSM	ENSMUSG00000005686.18	ENSMUST00000005829.13	4094	15	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAATAGAACAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110371816	110411601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_110372104_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_12	chr7	+	2522	13	FSM	ENSMUSG00000005686.18	ENST00000444303.6	2541	13	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCTTGAGAGAAAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	110377012	110410545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_110377232_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005686.18_3	chr7	+	2673	15	FSM	ENSMUSG00000005686.18	ENST00000528723.5	2691	15	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGCACTGTGTACACCT	NA	NA	NA	NA	NA	NA	NA	NA	110373030	110410327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_110373188_110377005_110377232_110387816_110388022_110390394_110390555_110392846_110393067_110394885_110395016_110399849_110400045_110401638_110401771_110402287_110402452_110402933_110403061_110404031_110404196_110405170_110405292_110406986_110407161_110409002_110409114_110409940
ENSMUSG00000005687.15_0	chr3	+	1446	7	FSM	ENSMUSG00000005687.15	ENSMUST00000005830.15	1467	7	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103078980	103086457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103079182_103079263_103079357_103080590_103080662_103081655_103081818_103082934_103082986_103084654_103084736_103085670
ENSMUSG00000005698.16_0	chr8	+	3949	12	FSM	ENSMUSG00000005698.16	ENST00000646076.1	3963	12	7	7	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACAGGCATTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106363100	106409543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106363353_106370147_106370269_106390318_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_14	chr8	+	3717	12	FSM	ENSMUSG00000005698.16	ENST00000646771.1	3730	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACTGCTGTACAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	106363222	106409510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
ENSMUSG00000005698.16_28	chr8	+	3581	11	FSM	ENSMUSG00000005698.16	ENST00000645306.1	3599	11	5	13	5	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCATAACGGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	106370171	106409528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408072
ENSMUSG00000005698.16_37	chr8	+	3602	11	FSM	ENSMUSG00000005698.16	ENST00000644753.1	3614	11	5	7	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACAGGCATTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	106370171	106409543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406705_106406892_106408066
ENSMUSG00000005698.16_9	chr8	+	3771	12	FSM	ENSMUSG00000005698.16	ENSMUST00000005841.16	3782	12	3	8	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGCATTCTGAAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	106363213	106409546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106363353_106370147_106370265_106390385_106391176_106391487_106391659_106393290_106393425_106396862_106396984_106397922_106398073_106401500_106401662_106402627_106402811_106403846_106403983_106406702_106406892_106408066
ENSMUSG00000005699.17_0	chr8	+	1250	3	FSM	ENSMUSG00000005699.17	ENSMUST00000098444.9	1273	3	15	8	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTAGATGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106427800	106430117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106427950_106428805_106429029_106429239
ENSMUSG00000005699.17_1	chr8	+	1248	3	FSM	ENSMUSG00000005699.17	ENSMUST00000093195.7	1265	3	10	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTAGATGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106428288	106430117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106428436_106428805_106429029_106429239
ENSMUSG00000005699.17_2	chr8	+	1235	3	FSM	ENSMUSG00000005699.17	ENSMUST00000212430.2	1261	3	18	8	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTAGATGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106428298	106430117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106428436_106428805_106429029_106429242
ENSMUSG00000005718.9_0	chr16	-	2241	7	FSM	ENSMUSG00000005718.9	ENSMUST00000005862.9	2247	7	3	3	3	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTAGTTATTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	4377715	4362527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4363612_4365118_4365275_4367194_4367336_4369093_4369265_4369609_4369709_4369798_4369965_4377291
ENSMUSG00000005732.15_0	chr16	-	1066	6	FSM	ENSMUSG00000005732.15	ENSMUST00000115645.10	1085	6	9	10	9	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGGACCAGCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	18066587	18057657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18058058_18058757_18058824_18059608_18059738_18063064_18063223_18065152_18065290_18066411
ENSMUSG00000005763.16_0	chr1	+	1075	8	FSM	ENSMUSG00000005763.16	ENST00000392122.3	1085	8	8	2	2	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTGCAGTGTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	165616251	165689075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_165616456_165682734_165682839_165683968_165684026_165684984_165685066_165686014_165686048_165686787_165686845_165687357_165687394_165688572
ENSMUSG00000005774.13_0	chr3	+	4322	10	FSM	ENSMUSG00000005774.13	ENSMUST00000137088.8	4333	10	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATACTATTTGGGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	94861421	94868864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ENSMUSG00000005774.13_1	chr3	+	4356	9	FSM	ENSMUSG00000005774.13	ENSMUST00000107253.8	4367	9	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCCATCTGAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	94861538	94868651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94861563_94862325_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092
ENSMUSG00000005774.13_2	chr3	+	4319	8	ISM	ENSMUSG00000005774.13	ENSMUST00000029772.3	4189	9	15	219	15	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATCTGAGCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	94862340	94868653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092
ENSMUSG00000005774.13_3	chr3	+	4176	9	FSM	ENSMUSG00000005774.13	ENSMUST00000029772.3	4189	9	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATACTATTTGGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	94862328	94868862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94862458_94862662_94862697_94863056_94863140_94863582_94863703_94863797_94863918_94864031_94864114_94864407_94864610_94865092_94865197_94865560
ENSMUSG00000005779.13_0	chr3	-	1174	7	FSM	ENSMUSG00000005779.13	ENSMUST00000005923.7	1183	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTTGTCTTTCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	94794263	94791403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94791752_94791981_94792071_94792227_94792345_94792970_94793053_94793385_94793533_94793751_94793959_94794079
ENSMUSG00000005802.13_0	chr2	-	5447	7	FSM	ENSMUSG00000005802.13	ENSMUST00000005952.11	5458	7	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTCTATTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	122544550	122523154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122527254_122527917_122528053_122528870_122528977_122529783_122529989_122531318_122531473_122536314_122536462_122543949
ENSMUSG00000005803.15_0	chr2	+	1787	10	FSM	ENSMUSG00000005803.15	ENSMUST00000005953.11	1804	10	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTTATTTGAGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	122607168	122651484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122607360_122626863_122627115_122629377_122629549_122634269_122634324_122639957_122640153_122641681_122641892_122645841_122646026_122649492_122649561_122649873_122650053_122651200
ENSMUSG00000005804.15_0	chr2	+	3466	5	FSM	ENSMUSG00000005804.15	ENSMUST00000005954.9	3484	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCCAGCATTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	122580431	122591386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122580625_122584508_122584651_122586045_122586134_122587974_122588062_122588430
ENSMUSG00000005813.13_0	chr3	-	2666	11	FSM	ENSMUSG00000005813.13	ENSMUST00000029804.13	2686	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATTATCCCACTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	138195264	138164724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_138166262_138168125_138168192_138171984_138172129_138174594_138174727_138177911_138178051_138179664_138179749_138180747_138180840_138184630_138184692_138186448_138186562_138188827_138188880_138195018
ENSMUSG00000005823.10_0	chr17	-	2394	17	FSM	ENSMUSG00000005823.10	ENSMUST00000233568.2	2405	17	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAAAAAACGATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57554661	57541634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550135_57551246_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005823.10_6	chr17	-	1626	17	FSM	ENSMUSG00000005823.10	ENST00000264080.11	1636	17	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	57554633	57542294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028_57552112_57552294_57552346_57553763_57553884_57554510
ENSMUSG00000005823.10_7	chr17	-	1320	14	FSM	ENSMUSG00000005823.10	ENST00000430424.8	1322	14	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTGTGTCCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	57552099	57542294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57542367_57542922_57543048_57543155_57543240_57543373_57543424_57543696_57543741_57543870_57544002_57544205_57544324_57544423_57544498_57544850_57544927_57545029_57545164_57549733_57549839_57549940_57550051_57551242_57551369_57552028
ENSMUSG00000005846.13_0	chr16	-	1931	9	FSM	ENSMUSG00000005846.13	ENSMUST00000119953.2	1945	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCGCTGTACTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	11021184	11010836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11011602_11012323_11012576_11014137_11014261_11014336_11014431_11017248_11017351_11017434_11017584_11019158_11019295_11020181_11020322_11021014
ENSMUSG00000005871.16_0	chr18	+	12784	16	FSM	ENSMUSG00000005871.16	ENSMUST00000079362.13	12811	16	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAACAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	34354046	34455588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34354330_34394057_34394211_34401350_34401433_34402108_34402308_34405491_34405601_34409616_34409731_34412321_34412406_34422890_34422996_34429083_34429183_34431475_34431855_34433018_34433115_34437635_34437776_34438618_34438697_34439315_34439433_34443745_34443961_34445057
ENSMUSG00000005873.7_0	chr18	-	2839	5	FSM	ENSMUSG00000005873.7	ENSMUST00000006027.7	2852	5	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACCTTTAAAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	34506413	34477941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34480222_34482687_34482857_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005873.7_2	chr18	-	661	4	FSM	ENSMUSG00000005873.7	ENST00000513339.5	684	4	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATACAAAAGAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34506388	34479925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34480222_34490144_34490284_34505457_34505552_34506256
ENSMUSG00000005881.14_0	chr2	+	1361	13	FSM	ENSMUSG00000005881.14	ENSMUST00000006035.13	1377	13	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAATGACTGGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	155849973	155860192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853327_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005881.14_3	chr2	+	1196	13	FSM	ENSMUSG00000005881.14	ENST00000357394.8	1216	13	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACGTAGCTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	155850011	155860061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155850149_155850284_155850356_155850483_155850572_155850779_155850900_155852359_155852454_155853019_155853186_155853268_155853331_155857908_155857941_155858625_155858723_155858808_155858874_155859499_155859637_155859716_155859773_155859990
ENSMUSG00000005882.19_1	chr2	-	1953	8	FSM	ENSMUSG00000005882.19	ENST00000359226.6	1955	8	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATGGAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155771963	155688803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005882.19_2	chr2	-	2077	9	ISM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	8323	2	8316	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATGGAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155763640	155688803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554
ENSMUSG00000005882.19_3	chr2	-	2115	10	FSM	ENSMUSG00000005882.19	ENST00000374384.6	2117	10	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATGGAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155771963	155688803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155689619_155689828_155690447_155693278_155693393_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005882.19_38	chr2	-	2137	10	ISM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	8325	6	8318	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTGCTCCTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	155763638	155688819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554
ENSMUSG00000005882.19_39	chr2	-	2177	11	FSM	ENSMUSG00000005882.19	ENST00000374385.10	2183	11	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTGCTCCTGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	155771963	155688819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005882.19_5	chr2	-	2022	9	FSM	ENSMUSG00000005882.19	ENST00000374380.6	2025	9	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATGGAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155771996	155688803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155763554_155763648_155771932
ENSMUSG00000005882.19_59	chr2	-	2612	10	FSM	ENSMUSG00000005882.19	ENSMUST00000109636.11	2633	10	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCACCAAAATAAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	155772216	155688847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155690447_155693278_155693393_155700031_155700110_155729028_155729138_155743217_155743276_155751272_155751346_155752276_155752385_155753660_155753757_155763554_155763648_155771932
ENSMUSG00000005882.19_6	chr2	-	1915	7	ISM	ENSMUSG00000005882.19	ENST00000359226.6	1955	8	8323	2	8316	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATGGAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155763640	155688803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_155689619_155689828_155690447_155693278_155693393_155700031_155700110_155752276_155752385_155753660_155753757_155763554
ENSMUSG00000005883.16_0	chr2	+	1050	11	FSM	ENSMUSG00000005883.16	ENST00000345868.8	1067	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAAATCACAGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	172821695	172834890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172821818_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005883.16_4	chr2	+	1165	12	FSM	ENSMUSG00000005883.16	ENST00000371263.8	1181	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAAAATCACAGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	172821694	172834890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172821818_172823771_172823886_172825808_172825898_172826664_172826732_172827189_172827299_172827696_172827784_172828895_172829031_172830723_172830824_172831160_172831199_172831716_172831794_172833838_172833951_172834776
ENSMUSG00000005886.15_0	chr1	-	8130	22	FSM	ENSMUSG00000005886.15	ENSMUST00000081713.11	8171	22	32	9	32	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTAATGTGGCGATAC	NA	NA	NA	NA	NA	NA	NA	NA	13442631	13209337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_13212997_13217098_13217189_13218540_13218740_13219154_13219333_13220913_13221143_13222602_13222681_13223020_13223300_13226593_13226760_13230384_13230515_13232296_13232513_13237119_13237331_13244302_13245573_13247297_13247446_13250704_13250849_13251439_13251542_13254398_13254588_13256956_13257135_13260310_13260415_13291530_13291704_13294832_13294938_13356192_13356250_13442406
ENSMUSG00000005893.15_1	chr6	+	7617	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113460.8	7647	15	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTAGTATGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	92068393	92150031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_92068724_92115967_92116008_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005893.15_13	chr6	+	2353	15	FSM	ENSMUSG00000005893.15	ENSMUST00000113463.8	2368	15	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTAGCAGTGTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92069419	92144677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_92069796_92082262_92082347_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005893.15_4	chr6	+	2403	14	FSM	ENSMUSG00000005893.15	ENST00000425241.5	2423	14	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTATTAAAAGAACCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	92068436	92144900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_92068724_92116760_92116872_92126584_92126786_92129295_92129399_92131315_92131496_92133552_92133701_92134386_92134481_92135310_92135445_92136192_92136371_92137299_92137422_92138893_92139034_92140101_92140240_92141168_92141275_92144439
ENSMUSG00000005897.15_1	chr10	+	3729	14	FSM	ENSMUSG00000005897.15	ENSMUST00000105290.9	3732	14	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAAATTTCTGTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	93983884	94033070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93983965_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ENSMUSG00000005897.15_2	chr10	+	2367	15	FSM	ENSMUSG00000005897.15	ENSMUST00000092213.11	2376	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATTGCGTTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	93984289	94031543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93984426_93984889_93984999_93992768_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ENSMUSG00000005897.15_5	chr10	+	3646	13	FSM	ENSMUSG00000005897.15	ENSMUST00000099343.2	2413	13	624	-1857	624	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAAATTTCTGTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	93992771	94033070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93992842_93998111_93998307_93999590_93999670_94001279_94001460_94003271_94003420_94003499_94003591_94006910_94007096_94007839_94008000_94017355_94017478_94024010_94024151_94026480_94026619_94028696_94028803_94031038
ENSMUSG00000005899.15_0	chr16	+	4617	20	FSM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	2	4	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCCATCTCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17437219	17462688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005899.15_3	chr16	+	4519	19	FSM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	4	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTCAACTAAGCCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	17437224	17462682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17437299_17439305_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005899.15_6	chr16	+	4535	19	ISM	ENSMUSG00000005899.15	ENSMUST00000006053.13	4623	20	2091	4	11	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCCATCTCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17439308	17462688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17453345_17453433_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005899.15_7	chr16	+	4454	18	ISM	ENSMUSG00000005899.15	ENSMUST00000163476.10	4532	19	2082	3	5	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAGCCATCTCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17439302	17462688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_17439390_17441768_17441856_17443583_17443727_17443807_17443884_17444293_17444403_17444502_17444556_17444665_17444818_17446932_17447063_17449849_17449922_17456359_17456506_17457137_17457229_17457608_17457710_17457989_17458154_17458728_17458926_17459225_17459460_17459561_17459694_17460032_17460162_17460337
ENSMUSG00000005907.15_1	chr5	+	4538	24	FSM	ENSMUSG00000005907.15	ENSMUST00000121291.8	4555	24	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTGTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3646082	3687232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3646518_3653231_3653376_3654795_3654880_3655433_3655549_3655646_3656411_3657666_3657787_3659853_3659978_3660178_3660289_3662880_3662964_3665074_3665208_3668816_3668914_3670594_3670766_3672232_3672388_3673940_3674131_3674419_3674587_3675999_3676135_3677517_3677583_3679969_3680113_3680188_3680293_3681588_3681766_3683715_3683947_3685314_3685513_3685779_3685911_3686770
ENSMUSG00000005917.16_0	chr11	-	2788	5	FSM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTGCTCTTCTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	21951615	21944764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121_21951190_21951547
ENSMUSG00000005917.16_1	chr11	-	2718	4	ISM	ENSMUSG00000005917.16	ENSMUST00000006071.14	2789	5	428	1	428	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTTGCTCTTCTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	21951187	21944764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_21947059_21948369_21948522_21949379_21949586_21951121
ENSMUSG00000005936.20_0	chr17	+	4192	8	FSM	ENSMUSG00000005936.20	ENSMUST00000233197.2	4196	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTGTTATTTAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29171235	29188523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29171544_29176852_29177032_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005936.20_1	chr17	+	3844	7	FSM	ENSMUSG00000005936.20	ENSMUST00000118762.9	3853	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTTGTTATTTAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	29171403	29188522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29171544_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005936.20_2	chr17	+	3510	6	FSM	ENSMUSG00000005936.20	ENSMUST00000232874.2	3530	6	13	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTCTCTTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29171457	29188516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29171544_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005936.20_4	chr17	+	2162	7	FSM	ENSMUSG00000005936.20	ENSMUST00000117672.9	2162	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTCTCTCCAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	29171654	29186903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29171732_29180387_29180662_29181783_29181887_29182224_29182346_29182934_29183133_29183947_29184059_29185625
ENSMUSG00000005949.10_0	chr11	-	2546	11	FSM	ENSMUSG00000005949.10	ENSMUST00000006103.9	2570	11	17	7	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACTCGGAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	73089851	73074428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73089743
ENSMUSG00000005949.10_2	chr11	-	2712	12	FSM	ENSMUSG00000005949.10	ENSMUST00000108476.8	2723	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTACACTCGGAACGTT	NA	NA	NA	NA	NA	NA	NA	NA	73089863	73074428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514_73079619_73082503_73082589_73083880_73083960_73087463_73087544_73087924_73088079_73089743
ENSMUSG00000005949.10_3	chr11	-	1239	8	FSM	ENSMUSG00000005949.10	ENST00000381870.8	1253	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCCGTACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73079605	73075012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255_73079388_73079514
ENSMUSG00000005949.10_4	chr11	-	1149	7	ISM	ENSMUSG00000005949.10	ENST00000381870.8	1253	8	224	7	224	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGACCCGTACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	73079388	73075012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_73075405_73075762_73075878_73076063_73076182_73077114_73077286_73078347_73078468_73078562_73078663_73079255
ENSMUSG00000005950.15_0	chr11	+	2377	13	FSM	ENSMUSG00000005950.15	ENSMUST00000006104.10	2395	13	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAAGCTGTTTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	73051254	73063501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057228_73057387_73057469_73057738_73057878_73058319_73058454_73058704_73058799_73058914_73058981_73061241_73061325_73061908_73062077_73062590
ENSMUSG00000005950.15_13	chr11	+	974	9	FSM	ENSMUSG00000005950.15	ENST00000547178.5	985	9	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTATGTGGCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	73051428	73058795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73051560_73055681_73055833_73056365_73056438_73056968_73057045_73057130_73057232_73057387_73057469_73057740_73057878_73058319_73058454_73058704
ENSMUSG00000005950.15_7	chr11	+	900	8	FSM	ENSMUSG00000005950.15	ENST00000345901.7	915	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTATGTGGCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	73051432	73058795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73051560_73055681_73055833_73056968_73057045_73057130_73057232_73057387_73057469_73057738_73057878_73058319_73058454_73058704
ENSMUSG00000005951.14_0	chr11	+	2785	7	FSM	ENSMUSG00000005951.14	ENSMUST00000006105.7	2808	7	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTTATCCCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	73090299	73115328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73090507_73094747_73094890_73104156_73104341_73104880_73105034_73105790_73105967_73108624_73108826_73113606
ENSMUSG00000005952.16_0	chr11	+	2504	15	FSM	ENSMUSG00000005952.16	ENST00000576351.5	2525	15	11	10	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAGGGACACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	73129062	73151325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73129369_73130102_73130270_73130346_73130500_73130966_73131108_73131208_73131508_73132431_73132582_73135028_73135188_73136801_73136898_73138996_73139068_73141528_73141695_73142082_73142150_73143848_73144169_73145018_73145147_73145594_73145711_73151160
ENSMUSG00000005958.16_0	chr16	+	4167	16	FSM	ENSMUSG00000005958.16	ENSMUST00000006112.7	4185	16	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGATGACTCTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	21023512	21042044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21024014_21031639_21031705_21033074_21033748_21035945_21036102_21036764_21037116_21037244_21037370_21037543_21037704_21037788_21037898_21038204_21038258_21039169_21039293_21039396_21039645_21040034_21040251_21040376_21040527_21040614_21040809_21040898_21041055_21041157
ENSMUSG00000005968.15_0	chr3	-	2610	13	FSM	ENSMUSG00000005968.15	ENSMUST00000006123.11	2631	13	13	8	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCTCTTTGCCCCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	94566165	94520071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94546701_94546777_94566031
ENSMUSG00000005968.15_1	chr3	-	2512	12	FSM	ENSMUSG00000005968.15	ENSMUST00000196733.5	2555	12	36	7	35	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACATCTCTTTGCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	94566143	94520072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94521499_94522030_94522132_94523076_94523161_94523928_94524035_94529357_94529453_94529994_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ENSMUSG00000005968.15_4	chr3	-	1355	8	FSM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTGTTCGCTATAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94566102	94520308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94521065_94530054_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231_94546334_94566031
ENSMUSG00000005968.15_5	chr3	-	1280	7	ISM	ENSMUSG00000005968.15	ENST00000353024.4	1363	8	19773	8	19773	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCATCGTGTTCGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	94546334	94520313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_94521065_94530054_94530124_94535503_94535618_94539903_94539970_94541764_94541855_94542715_94542803_94546231
ENSMUSG00000005973.7_0	chr2	-	2705	6	FSM	ENSMUSG00000005973.7	ENSMUST00000006128.7	2720	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCCACAAGCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	105229654	105216640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105218372_105219321_105219522_105222314_105222376_105223933_105224113_105225023_105225218_105229314
ENSMUSG00000005981.12_0	chr16	-	2310	18	FSM	ENSMUSG00000005981.12	ENSMUST00000006137.9	2320	18	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACGTTTTCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895681	3857834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3858089_3858222_3858296_3861816_3861963_3862476_3862563_3863306_3863446_3863743_3863930_3867214_3867363_3870728_3870799_3871344_3871466_3872617_3872774_3873660_3873735_3874193_3874304_3878620_3878782_3880193_3880266_3883096_3883238_3886119_3886203_3886720_3886886_3895556
ENSMUSG00000005982.15_0	chr16	+	846	5	FSM	ENSMUSG00000005982.15	ENST00000421765.7	866	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCAGAATATATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	3702487	3719959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3719639
ENSMUSG00000005982.15_1	chr16	+	2337	7	FSM	ENSMUSG00000005982.15	ENSMUST00000186375.8	2350	7	6	7	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATCCTGTCTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	3702552	3722627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3718506_3718742_3719646_3719990_3721329
ENSMUSG00000005982.15_10	chr16	+	649	4	FSM	ENSMUSG00000005982.15	ENST00000576916.5	663	4	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCAGAATATATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	3702587	3719959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3719639
ENSMUSG00000005983.16_0	chr16	-	2578	3	FSM	ENSMUSG00000005983.16	ENSMUST00000115859.8	2592	3	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCCTGGCACAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3726540	3722167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3724165_3724704_3725059_3726313
ENSMUSG00000005983.16_1	chr16	-	956	3	FSM	ENSMUSG00000005983.16	ENST00000437192.8	968	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTTGTTTGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3725578	3723662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3724165_3724704_3725059_3725478
ENSMUSG00000005983.16_2	chr16	-	852	2	ISM	ENSMUSG00000005983.16	ENSMUST00000177323.8	915	3	506	7	506	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCACCTTCTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3725060	3723668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_3724165_3724704
ENSMUSG00000005986.17_0	chr19	-	2129	15	FSM	ENSMUSG00000005986.17	ENSMUST00000056888.13	2139	15	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCAGTAGGCTTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4333162	4320216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4320578_4320821_4320914_4320993_4321158_4321246_4321364_4321469_4321628_4322597_4322729_4322827_4322890_4323048_4323131_4323563_4323631_4330564_4330755_4330964_4331109_4331190_4331237_4331945_4332071_4332196_4332333_4332908
ENSMUSG00000005994.15_0	chr4	+	808	5	FSM	ENSMUSG00000005994.15	ENST00000381136.2	817	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2098	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGCCGCCTGCCCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	80755831	80769119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_80755941_80763027_80763196_80764807_80764988_80767966_80768114_80768915
ENSMUSG00000006005.19_0	chr1	+	7408	52	FSM	ENSMUSG00000006005.19	ENSMUST00000124973.9	7430	52	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTGAATAAGATTGACG	NA	NA	NA	NA	NA	NA	NA	NA	150268601	150325557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_150268765_150269106_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUSG00000006005.19_59	chr1	+	7454	51	FSM	ENSMUSG00000006005.19	ENSMUST00000119161.9	7480	51	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAAAAAGTATCACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	150269014	150325674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_150269410_150270949_150271055_150274350_150274425_150278005_150278103_150279348_150279453_150279625_150279791_150282212_150282306_150283079_150283161_150283240_150283329_150284494_150284636_150284953_150285046_150285730_150285929_150287651_150287760_150288641_150288869_150289394_150289559_150290166_150290301_150290416_150290566_150291819_150291983_150293132_150293268_150293698_150293840_150295588_150295755_150297386_150297554_150298278_150298432_150298807_150298925_150299236_150299441_150299547_150299733_150300413_150300562_150301387_150301526_150302613_150302746_150303870_150304002_150305085_150305297_150306311_150306456_150306912_150307100_150308161_150308368_150308569_150308632_150309428_150309638_150311393_150311667_150312468_150312618_150313153_150313238_150314832_150315028_150315817_150315950_150316189_150316281_150317809_150317995_150318934_150319004_150319085_150319181_150320118_150320226_150321618_150321715_150321835_150321993_150323262_150323382_150324893_150324990_150325482
ENSMUSG00000006010.15_0	chr1	-	3249	14	FSM	ENSMUSG00000006010.15	ENSMUST00000111913.9	3273	14	12	12	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACATTAATGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	150268819	150237067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150256062_150256129_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUSG00000006010.15_6	chr1	-	3169	13	FSM	ENSMUSG00000006010.15	ENSMUST00000097546.9	3174	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAACATTAATGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	150268806	150237068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_150238640_150239241_150239350_150247779_150247951_150250545_150250637_150251246_150251376_150257249_150257346_150258018_150258160_150258808_150258846_150260179_150260287_150262108_150262205_150264273_150264409_150265986_150266108_150268440
ENSMUSG00000006014.17_0	chr1	-	3798	12	FSM	ENSMUSG00000006014.17	ENSMUST00000164600.8	4263	12	2	463	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATACAAAACAGTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	150341347	150325625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_150325833_150326513_150326640_150326999_150327201_150327604_150327762_150327973_150328111_150329213_150329292_150329802_150332089_150333238_150333359_150333899_150334044_150336402_150336523_150337847_150337971_150341248
ENSMUSG00000006014.17_2	chr1	-	4144	11	ISM	ENSMUSG00000006014.17	ENSMUST00000164600.8	4263	12	3377	20	3377	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAATGAAATAAAATACAC	NA	NA	NA	NA	NA	NA	NA	NA	150337972	150325182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_150325833_150326513_150326640_150326999_150327201_150327604_150327762_150327973_150328111_150329213_150329292_150329802_150332089_150333238_150333359_150333899_150334044_150336402_150336523_150337847
ENSMUSG00000006014.17_4	chr1	-	3811	13	FSM	ENSMUSG00000006014.17	ENSMUST00000161611.8	3821	13	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATACAAAACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	150341916	150325629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_150325833_150326513_150326640_150326999_150327201_150327604_150327762_150327973_150328111_150329213_150329292_150329802_150332089_150333238_150333359_150333899_150334044_150336402_150336523_150337847_150337971_150341248_150341348_150341899
ENSMUSG00000006019.16_0	chr7	-	3826	16	ISM	ENSMUSG00000006019.16	ENSMUST00000121123.8	3880	17	3096	5	3052	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATTAATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15952866	15931076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_15931348_15932482_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
ENSMUSG00000006019.16_1	chr7	-	3875	17	FSM	ENSMUSG00000006019.16	ENSMUST00000121123.8	3880	17	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAATTAATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15955962	15931076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15931348_15932482_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ENSMUSG00000006019.16_10	chr7	-	3798	17	FSM	ENSMUSG00000006019.16	ENSMUST00000163968.8	3801	17	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGCCTCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	15955957	15931148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955922
ENSMUSG00000006019.16_13	chr7	-	4051	17	FSM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGCCTCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	15955896	15931148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912_15952876_15955608
ENSMUSG00000006019.16_9	chr7	-	3763	16	ISM	ENSMUSG00000006019.16	ENSMUST00000094816.3	4073	17	3043	0	3043	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCTGTGCCTCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	15952875	15931148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_15931356_15932490_15932627_15932769_15932947_15933599_15933885_15935854_15935962_15937096_15937215_15937498_15937673_15937791_15938029_15939321_15939424_15939912_15940107_15944438_15944614_15946733_15946952_15948266_15948370_15949148_15949404_15950143_15950456_15951912
ENSMUSG00000006021.6_0	chr7	+	1613	12	FSM	ENSMUSG00000006021.6	ENSMUST00000006178.5	1630	12	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCTTTGTCTGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	15853834	15861439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_15854107_15854414_15854498_15854636_15854722_15854794_15854850_15856959_15857036_15857124_15857199_15857696_15857807_15857879_15857958_15858641_15858718_15859637_15859774_15859861_15860033_15861042
ENSMUSG00000006024.14_1	chr7	+	2502	11	FSM	ENSMUSG00000006024.14	ENSMUST00000006181.7	2517	11	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAACCTGCACATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	15832392	15851895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_15832700_15841477_15841558_15842975_15843093_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006024.14_10	chr7	+	1206	10	FSM	ENSMUSG00000006024.14	ENST00000595227.5	1220	10	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCATGGGGTGCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	15832610	15850934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_15832700_15841477_15841558_15846508_15846556_15847036_15847115_15847274_15847331_15847400_15847486_15848045_15848151_15849127_15849197_15849524_15849576_15850388
ENSMUSG00000006050.13_0	chr18	-	1964	5	FSM	ENSMUSG00000006050.13	ENSMUST00000173875.9	1979	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTATGAGTGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36803860	36799740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36800713_36800843_36800953_36801704_36801902_36803056_36803183_36803300
ENSMUSG00000006057.16_10	chr11	-	373	2	ISM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	1880	38	1336	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAACAACAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	95964527	95963850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_95964045_95964348
ENSMUSG00000006057.16_3	chr11	-	4655	4	FSM	ENSMUSG00000006057.16	ENSMUST00000178611.8	4660	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTTTAAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	95965858	95959692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812
ENSMUSG00000006057.16_4	chr11	-	4700	5	FSM	ENSMUSG00000006057.16	ENSMUST00000090541.12	4715	5	0	15	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTTTAAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	95966496	95959692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966452
ENSMUSG00000006057.16_5	chr11	-	4610	3	ISM	ENSMUSG00000006057.16	ENSMUST00000178611.8	4660	4	997	0	997	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGCTTTAAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	95964866	95959692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_95964045_95964348_95964528_95964787
ENSMUSG00000006057.16_6	chr11	-	669	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107686.8	691	5	20	2	20	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATGTGCCTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	95966387	95963814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966252
ENSMUSG00000006057.16_7	chr11	-	596	5	FSM	ENSMUSG00000006057.16	ENSMUST00000107684.2	596	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACCATGTGCCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95966445	95963815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95964045_95964348_95964528_95964787_95964866_95965812_95965860_95966382
ENSMUSG00000006057.16_8	chr11	-	443	4	FSM	ENSMUSG00000006057.16	ENST00000506855.1	456	4	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAACAACAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	95966475	95963850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95964045_95964348_95964528_95965812_95965860_95966452
ENSMUSG00000006057.16_9	chr11	-	413	3	ISM	ENSMUSG00000006057.16	ENST00000506855.1	456	4	623	13	11	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAACAACAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	95965852	95963850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_95964045_95964348_95964528_95965812
ENSMUSG00000006058.11_0	chr11	+	989	8	FSM	ENSMUSG00000006058.11	ENSMUST00000006217.10	1004	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTTTTTTGTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	95925719	95938250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95937105_95937181_95938020
ENSMUSG00000006058.11_1	chr11	+	840	7	FSM	ENSMUSG00000006058.11	ENSMUST00000107700.4	849	7	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTTTTTTGTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	95925793	95938250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95925894_95926144_95926196_95930104_95930244_95932450_95932556_95934229_95934303_95935986_95936129_95938020
ENSMUSG00000006095.13_0	chr7	-	1397	6	FSM	ENSMUSG00000006095.13	ENSMUST00000006254.6	1416	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTTGTGCAAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29931685	29923562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29923773_29923897_29923971_29926268_29926461_29927028_29927126_29930550_29930695_29931004
ENSMUSG00000006095.13_6	chr7	-	286	3	FSM	ENSMUSG00000006095.13	ENST00000586868.1	302	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACTGTACCTGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	29930654	29923663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29923773_29923897_29923971_29930550
ENSMUSG00000006127.10_0	chr11	+	2672	12	FSM	ENSMUSG00000006127.10	ENSMUST00000006286.9	2679	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGACTCCTTTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	75521820	75539697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75522024_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006127.10_7	chr11	+	2457	12	FSM	ENSMUSG00000006127.10	ENST00000320345.10	2469	12	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGTCTTGCCCTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	75522387	75539503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75522570_75523894_75524003_75524288_75524398_75527769_75527887_75528235_75528412_75528970_75529083_75530281_75530392_75536253_75536444_75537611_75537750_75538018_75538103_75538227_75538333_75538477
ENSMUSG00000006134.5_0	chr16	+	5027	3	FSM	ENSMUSG00000006134.5	ENSMUST00000006293.5	5042	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCCTCGGTGTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	17269860	17305293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17270653_17286756_17287223_17301524
ENSMUSG00000006154.14_0	chr7	+	1897	11	FSM	ENSMUSG00000006154.14	ENST00000586329.5	1905	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGGCTAAGTCCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	4472881	4482228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4473042_4473281_4473432_4473806_4473890_4474225_4474488_4474794_4474922_4475111_4475201_4475297_4475373_4475473_4475623_4476929_4477213_4480328_4480459_4481839
ENSMUSG00000006154.14_3	chr7	+	1009	7	FSM	ENSMUSG00000006154.14	ENST00000588359.5	1026	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGCGAGACCAAAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4476940	4481897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4477213_4480328_4480459_4480562_4480695_4480888_4480998_4481138_4481314_4481617_4481751_4481839
ENSMUSG00000006169.21_0	chr11	+	3436	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109261.11	3452	12	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAACCAACGTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45742795	45801441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798666_45798872_45799767
ENSMUSG00000006169.21_1	chr11	+	3385	12	FSM	ENSMUSG00000006169.21	ENSMUST00000109260.3	3398	12	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAACCAACGTGGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	45742792	45801441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_45743020_45774536_45774642_45775158_45775256_45777257_45777367_45778212_45778378_45781448_45781627_45784697_45784945_45785886_45785957_45793037_45793113_45797007_45797295_45798720_45798872_45799767
ENSMUSG00000006179.10_0	chr13	-	620	4	ISM	ENSMUSG00000006179.10	ENST00000421826.6	665	5	112	7	112	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGTCAGGTAAGAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	22193718	22187102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_22187242_22187315_22187496_22189260_22189403_22193559
ENSMUSG00000006179.10_1	chr13	-	658	5	FSM	ENSMUSG00000006179.10	ENST00000421826.6	665	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGTCAGGTAAGAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	22193830	22187102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_22187242_22187315_22187496_22189260_22189403_22193559_22193727_22193800
ENSMUSG00000006191.18_0	chr13	-	2608	16	FSM	ENSMUSG00000006191.18	ENSMUST00000006353.14	2629	16	9	12	-2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATAAGAAAACACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30039648	29509295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_29510212_29538612_29538778_29541482_29541567_29627990_29628054_29658511_29658693_29701395_29701542_29736211_29736379_29809603_29809708_29875581_29875703_29893077_29893127_29901703_29901801_29961199_29961285_30030210_30030324_30033921_30034092_30038880_30038925_30039545
ENSMUSG00000006205.14_0	chr7	+	2019	9	FSM	ENSMUSG00000006205.14	ENSMUST00000006367.8	2041	9	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGTAGATTTTGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	130537945	130587381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130538474_130563242_130563343_130563702_130563908_130581030_130581226_130581681_130581715_130583386_130583502_130583966_130584025_130585389_130585486_130586692
ENSMUSG00000006215.13_0	chr4	+	2713	16	FSM	ENSMUSG00000006215.13	ENSMUST00000006377.13	2722	16	5	4	4	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTGCCTGTGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	141171969	141194532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193984_141194075_141194153
ENSMUSG00000006215.13_6	chr4	+	2731	16	FSM	ENSMUSG00000006215.13	ENST00000375733.6	2741	16	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTGCCTGTGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	141171973	141194532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141172114_141174561_141174649_141189079_141189287_141189845_141190035_141190577_141190719_141190983_141191107_141191547_141191790_141191870_141192014_141192099_141192401_141192659_141192748_141192834_141192952_141193032_141193154_141193287_141193419_141193658_141193869_141193962_141194075_141194153
ENSMUSG00000006219.13_0	chr4	-	3080	9	FSM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141325514	141303372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141325393
ENSMUSG00000006219.13_1	chr4	-	3034	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105784.8	3036	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141327233	141303372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141327158
ENSMUSG00000006219.13_2	chr4	-	2960	8	ISM	ENSMUSG00000006219.13	ENSMUST00000006381.11	3101	9	2275	0	2275	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141323260	141303372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205
ENSMUSG00000006219.13_3	chr4	-	3085	9	FSM	ENSMUSG00000006219.13	ENSMUST00000105785.9	3091	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTCTTGTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141333357	141303372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141305255_141308293_141308412_141310364_141310544_141312006_141312177_141316608_141316727_141317254_141317437_141322534_141322791_141323205_141323260_141333231
ENSMUSG00000006221.8_0	chr4	+	2747	3	FSM	ENSMUSG00000006221.8	ENSMUST00000102486.5	2769	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATATGACAGACTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	141148102	141152613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141149292_141149811_141149946_141151189
ENSMUSG00000006221.8_2	chr4	+	567	3	FSM	ENSMUSG00000006221.8	ENST00000406363.2	578	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGGCCTCCCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	141149064	141151379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141149296_141149799_141149946_141151189
ENSMUSG00000006235.7_0	chr9	-	1746	8	FSM	ENSMUSG00000006235.7	ENSMUST00000006397.7	1761	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTTGTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	21874794	21870199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21870967_21871056_21871145_21871819_21871908_21871985_21872140_21872743_21872902_21872986_21873163_21873499_21873633_21874612
ENSMUSG00000006241.17_0	chr9	+	1517	13	FSM	ENSMUSG00000006241.17	ENSMUST00000006403.7	1531	13	8	6	8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGACTTTTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21838774	21847162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21839025_21840388_21840523_21840603_21840831_21842605_21842640_21842994_21843084_21843160_21843243_21844099_21844287_21844841_21844910_21844991_21845069_21845413_21845530_21845730_21845814_21846825_21846925_21847091
ENSMUSG00000006262.16_0	chr5	+	8962	6	FSM	ENSMUSG00000006262.16	ENSMUST00000113229.8	8967	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACGCTAAAAAAAAAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88868713	88912074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88868981_88891162_88891330_88892900_88893010_88897383_88897518_88901018_88901183_88903953
ENSMUSG00000006262.16_1	chr5	+	2691	6	FSM	ENSMUSG00000006262.16	ENSMUST00000006424.8	2705	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTTGGAAAAGGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88868736	88905841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88868981_88891162_88891330_88892915_88893010_88897383_88897518_88901018_88901183_88903953
ENSMUSG00000006273.15_0	chr8	+	2810	14	FSM	ENSMUSG00000006273.15	ENSMUST00000006435.8	2825	14	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCTGAAATGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	69541306	69566357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_69541581_69548871_69548928_69554016_69554116_69554587_69554682_69554815_69554894_69555102_69555243_69555413_69555516_69556031_69556130_69556296_69556421_69558460_69558612_69560233_69560317_69560934_69561040_69562531_69562662_69565081
ENSMUSG00000006276.11_0	chr8	-	3123	24	FSM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	1	5	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAACATGAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	73175303	73094847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUSG00000006276.11_1	chr8	-	3066	23	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	21229	5	21220	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAACATGAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	73154075	73094847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035
ENSMUSG00000006276.11_11	chr8	-	3322	15	ISM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	21220	5	21216	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGTCTTTGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73154079	73131266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035
ENSMUSG00000006276.11_12	chr8	-	3370	16	FSM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGTCTTTGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73175298	73131266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUSG00000006276.11_13	chr8	-	3276	14	ISM	ENSMUSG00000006276.11	ENSMUST00000212590.2	3376	16	21691	5	21687	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGGTCTTTGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73153608	73131266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520
ENSMUSG00000006276.11_2	chr8	-	2678	22	FSM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAATACAAAACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	73175295	73094852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035_73154078_73175248
ENSMUSG00000006276.11_3	chr8	-	3028	22	ISM	ENSMUSG00000006276.11	ENSMUST00000163643.3	3129	24	21692	5	21683	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAAAACATGAGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	73153612	73094847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73095369_73099809_73100016_73112156_73112290_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132834_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520
ENSMUSG00000006276.11_4	chr8	-	2621	21	ISM	ENSMUSG00000006276.11	ENSMUST00000212121.2	2686	22	21221	15	21221	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATTTTAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	73154074	73094859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73095369_73121747_73121831_73122555_73122617_73125529_73125667_73126869_73126921_73127666_73127791_73132927_73133000_73133952_73134151_73134737_73134900_73135260_73135334_73136170_73136257_73136523_73136681_73138610_73138769_73140704_73140933_73143251_73143312_73145733_73145860_73150077_73150141_73150745_73150842_73152849_73152898_73153520_73153611_73154035
ENSMUSG00000006281.9_1	chr14	-	8151	55	FSM	ENSMUSG00000006281.9	ENSMUST00000006444.9	8171	55	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTAGAGTGTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	51108008	51061526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51061748_51061961_51062067_51062188_51062407_51062512_51062619_51064269_51064367_51064512_51064657_51066361_51066487_51066624_51066762_51067119_51067250_51067328_51067406_51067586_51067720_51069188_51069297_51070910_51071025_51071370_51071535_51073448_51073662_51073766_51073921_51074141_51074355_51074494_51074651_51074836_51074937_51075040_51075166_51075980_51076099_51076402_51076644_51078038_51078154_51078425_51078515_51078666_51078801_51079013_51079165_51079321_51079455_51080633_51080727_51081162_51081343_51081479_51081637_51081711_51081888_51081990_51082186_51082308_51082427_51082516_51082631_51082872_51082998_51083931_51084053_51084289_51084467_51085070_51085230_51087490_51087551_51088043_51088175_51089378_51089457_51090433_51090593_51091006_51091176_51091584_51091772_51091965_51092057_51093046_51093157_51098034_51098193_51098380_51098506_51099939_51100018_51100310_51100473_51100958_51101121_51103406_51103542_51104145_51104326_51105451_51106043_51107869
ENSMUSG00000006288.9_0	chr14	-	1827	10	FSM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	51022972	51002882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUSG00000006288.9_1	chr14	-	1751	9	ISM	ENSMUSG00000006288.9	ENSMUST00000006451.8	1842	10	3910	11	3886	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTACCCTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	51019066	51002882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_51003480_51004599_51004745_51009572_51009788_51009930_51010078_51010733_51010791_51012747_51012840_51014718_51014870_51015213_51015426_51018931
ENSMUSG00000006288.9_5	chr14	-	2352	4	FSM	ENSMUSG00000006288.9	ENSMUST00000226768.2	2366	4	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATACAGACTTCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	51022949	51012917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51014870_51015213_51015426_51018931_51019065_51022894
ENSMUSG00000006289.15_1	chr14	-	3372	11	FSM	ENSMUSG00000006289.15	ENSMUST00000159292.8	3388	11	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATTAAGAGCACTTACA	NA	NA	NA	NA	NA	NA	NA	NA	51162341	51151057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51162120
ENSMUSG00000006289.15_10	chr14	-	1202	11	FSM	ENSMUSG00000006289.15	ENSMUST00000162177.8	1219	11	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGATAATTAGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	51162134	51153148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51153356_51153608_51153708_51153798_51153875_51154070_51154162_51154256_51154323_51154688_51154768_51154910_51154961_51155292_51155389_51157072_51157249_51157386_51157507_51161992
ENSMUSG00000006299.14_0	chr1	-	1801	11	FSM	ENSMUSG00000006299.14	ENSMUST00000006462.14	1817	11	9	7	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCAGTGTCTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	74323888	74319005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323201_74323661
ENSMUSG00000006299.14_7	chr1	-	1746	11	FSM	ENSMUSG00000006299.14	ENSMUST00000178235.8	1756	11	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCAGTGTCTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	74323831	74319006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74319469_74319941_74320097_74320247_74320339_74320487_74320592_74320685_74320802_74320894_74320979_74321185_74321331_74321569_74321710_74322252_74322373_74323044_74323204_74323661
ENSMUSG00000006301.18_0	chr1	-	2361	12	FSM	ENSMUSG00000006301.18	ENSMUST00000016309.16	2378	12	10	7	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGACCCTTGAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74343554	74327412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356_74334599_74343281
ENSMUSG00000006301.18_5	chr1	-	11000	11	FSM	ENSMUSG00000006301.18	ENSMUST00000113796.8	11011	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGACCCTTGAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	74343510	74327412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74328678_74329029_74329084_74329910_74330007_74330358_74330447_74330589_74330628_74330853_74330894_74331615_74331667_74331993_74332048_74332163_74332229_74333066_74333162_74334356
ENSMUSG00000006304.15_0	chr1	+	1424	11	FSM	ENSMUSG00000006304.15	ENSMUST00000113820.9	1439	11	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	4701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTACTTGAGAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74275664	74307362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74275770_74275976_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUSG00000006304.15_19	chr1	+	1390	10	FSM	ENSMUSG00000006304.15	ENSMUST00000006467.14	1404	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74275683	74307140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74276059_74285238_74285274_74287290_74287404_74290412_74290459_74293986_74294174_74295116_74295211_74301617_74301745_74302901_74303003_74303511_74303613_74306929
ENSMUSG00000006307.17_0	chr7	-	8449	37	FSM	ENSMUSG00000006307.17	ENSMUST00000108154.9	8454	37	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTGGTCTTTCCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30288147	30268283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30268862_30268940_30269071_30269182_30269267_30269362_30269471_30269715_30269894_30269978_30270054_30270125_30270267_30273384_30273492_30273572_30273663_30273749_30275050_30275277_30275476_30276042_30276204_30276298_30276378_30276455_30276577_30276721_30276881_30277907_30278046_30278127_30278220_30278304_30278421_30278931_30279006_30279145_30279251_30279350_30279441_30279514_30279700_30279863_30279978_30280439_30280558_30281074_30281171_30281262_30281410_30281592_30281707_30281832_30281932_30282212_30282308_30282608_30282888_30283124_30283181_30283341_30283622_30283873_30284025_30284117_30284232_30284418_30286455_30286679_30286753_30287779
ENSMUSG00000006311.9_0	chr7	-	1051	6	FSM	ENSMUSG00000006311.9	ENST00000479824.5	1067	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATGATATGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30335657	30333102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335526
ENSMUSG00000006311.9_1	chr7	-	1415	7	FSM	ENSMUSG00000006311.9	ENST00000402764.6	1434	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGATGATATGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30335931	30333102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30333260_30333413_30333527_30334037_30334515_30334732_30334793_30334976_30335090_30335185_30335276_30335526
ENSMUSG00000006313.6_0	chr7	-	1404	8	FSM	ENSMUSG00000006313.6	ENSMUST00000006476.6	1421	8	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGCAGAGGAGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30312255	30302516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30303068_30303196_30303281_30304485_30304666_30306299_30306408_30306555_30306631_30309038_30309240_30311811_30311900_30312138
ENSMUSG00000006315.10_0	chr7	-	699	6	FSM	ENSMUSG00000006315.10	ENSMUST00000209065.2	727	6	21	7	21	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30428725	30427132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626
ENSMUSG00000006315.10_1	chr7	-	855	7	FSM	ENSMUSG00000006315.10	ENSMUST00000006478.10	870	7	12	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTTTGTTATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30428953	30427132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30427329_30427411_30427534_30427629_30427715_30427856_30427994_30428081_30428142_30428626_30428697_30428768
ENSMUSG00000006333.15_0	chr7	+	742	5	FSM	ENSMUSG00000006333.15	ENSMUST00000006496.15	751	5	3	6	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTTATTGGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3706994	3709890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3707064_3707325_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUSG00000006333.15_14	chr7	+	671	4	FSM	ENSMUSG00000006333.15	ENSMUST00000108625.8	914	4	277	-34	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTTATTGGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3707327	3709890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3707448_3707644_3707768_3708731_3708919_3709649
ENSMUSG00000006335.17_0	chr7	-	1156	6	FSM	ENSMUSG00000006335.17	ENSMUST00000108641.10	1166	6	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTTGTCTAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3632923	3623327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3623474_3623745_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000006335.17_1	chr7	-	1066	6	FSM	ENSMUSG00000006335.17	ENSMUST00000155592.8	1091	6	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACACTTGTCTAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3632863	3623327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3623474_3623775_3623983_3624061_3624132_3627597_3627669_3631826_3632086_3632550
ENSMUSG00000006335.17_2	chr7	-	689	5	FSM	ENSMUSG00000006335.17	ENST00000391757.1	708	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAGATTCCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	3632074	3623343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3623474_3623775_3623946_3624061_3624132_3627597_3627669_3631826
ENSMUSG00000006344.18_0	chr10	+	2071	12	FSM	ENSMUSG00000006344.18	ENST00000398292.3	2094	12	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGAGGAGCCACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	75425540	75450997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75425717_75438453_75438585_75438807_75438904_75439800_75439997_75440476_75440635_75441089_75441237_75444584_75444722_75445032_75445227_75445678_75445786_75445881_75446066_75446261_75446373_75450563
ENSMUSG00000006345.11_0	chr10	+	1521	11	ISM	ENSMUSG00000006345.11	ENSMUST00000006508.10	2167	13	2522	160	8	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGCCCGGAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	75411803	75421856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_14	chr10	+	1340	9	FSM	ENSMUSG00000006345.11	ENST00000412448.5	1356	9	11	5	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCCGGAAGAGGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75414571	75421860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420631_75420842_75420991_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006345.11_18	chr10	+	795	4	FSM	ENSMUSG00000006345.11	ENST00000404223.5	809	4	9	5	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCCGGAAGAGGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75420638	75421860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75420842_75420991_75421120_75421220_75421539_75421714
ENSMUSG00000006345.11_3	chr10	+	1492	11	NIC	ENSMUSG00000006345.11	novel	2167	13	NA	NA	11	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCCGGAAGAGGCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	75411806	75421860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_+_75411915_75412049_75412137_75414562_75414756_75415059_75415218_75416337_75416488_75417130_75417268_75420653_75420842_75421021_75421120_75421220_75421334_75421424_75421539_75421714
ENSMUSG00000006356.11_0	chr12	+	1422	7	FSM	ENSMUSG00000006356.11	ENSMUST00000084882.9	1439	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	19879	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAAGACCCAGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	113103865	113109119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113104235_113107078_113107232_113107634_113107776_113107848_113107918_113108018_113108114_113108429_113108488_113108582
ENSMUSG00000006360.12_0	chr12	+	435	5	FSM	ENSMUSG00000006360.12	ENSMUST00000006523.12	445	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCCTGTGTTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	113115641	113117497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113115774_113116900_113116996_113117074_113117133_113117237_113117285_113117394
ENSMUSG00000006369.15_0	chr15	+	3641	17	FSM	ENSMUSG00000006369.15	ENSMUST00000057410.14	3659	17	13	5	13	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGAGATGACGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85090162	85170731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85147459_85147603_85149450_85149583_85169240
ENSMUSG00000006369.15_19	chr15	+	1577	13	FSM	ENSMUSG00000006369.15	ENST00000340923.9	1590	13	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACGTAAGTCCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85106124	85128501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85106211_85108450_85108587_85111168_85111320_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383
ENSMUSG00000006369.15_7	chr15	+	2255	15	FSM	ENSMUSG00000006369.15	ENSMUST00000109432.4	2273	15	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCATGCCTCTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	85090216	85136079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85090414_85106104_85106211_85108450_85108587_85111168_85111341_85113760_85113818_85114999_85115102_85115617_85115756_85116739_85116878_85121808_85121953_85122663_85122793_85123494_85123621_85124820_85124941_85126211_85126344_85128383_85128508_85135645
ENSMUSG00000006373.11_0	chrX	+	1698	2	FSM	ENSMUSG00000006373.11	ENST00000535419.2	1711	2	8	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAATATAGTGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35861855	35869726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35862268_35868440
ENSMUSG00000006373.11_1	chrX	+	1842	3	FSM	ENSMUSG00000006373.11	ENSMUST00000073339.7	1857	3	9	6	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAATATAGTGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	35861867	35869726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35862268_35865773_35865930_35868440
ENSMUSG00000006378.16_0	chr15	+	2348	9	FSM	ENSMUSG00000006378.16	ENSMUST00000006544.9	2370	9	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGCAAAACCAAAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	78915079	78922537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78915321_78918130_78918262_78919159_78919262_78919456_78919604_78919976_78920132_78920219_78920303_78920466_78920639_78920952_78921075_78921342
ENSMUSG00000006386.16_0	chr4	+	3740	21	FSM	ENSMUSG00000006386.16	ENST00000519097.5	3759	21	13	6	13	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTCGTTAAAATAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94627455	94762625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94627930_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740112_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_11	chr4	+	4100	22	FSM	ENSMUSG00000006386.16	ENST00000615002.4	4112	22	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTCGTTAAAATAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94627448	94762625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718082_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006386.16_41	chr4	+	3802	22	FSM	ENSMUSG00000006386.16	ENST00000406359.8	3812	22	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTCGTTAAAATAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	94627709	94762626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94627930_94669052_94669365_94686847_94686959_94687363_94687517_94692521_94692654_94693049_94693191_94708320_94708473_94715492_94715638_94715906_94716063_94718120_94718256_94725353_94725642_94737857_94738158_94739959_94740115_94741605_94741817_94743558_94743670_94747124_94747316_94747807_94747922_94751849_94751921_94752841_94752883_94753659_94753757_94761278_94761379_94762160
ENSMUSG00000006390.16_0	chr4	+	1409	7	FSM	ENSMUSG00000006390.16	ENST00000413844.3	1425	7	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTGAGATTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	118285265	118289805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006390.16_2	chr4	+	1776	8	FSM	ENSMUSG00000006390.16	ENSMUST00000006557.13	1811	8	11	24	11	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	2968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAATAAAAACAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118285300	118290126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118285413_118287692_118287753_118287911_118288103_118288259_118288341_118288462_118288520_118288605_118288712_118288793_118288931_118289094
ENSMUSG00000006392.17_0	chr4	+	1129	7	FSM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	0	5	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAACCCTGCCATTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	118266533	118272303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118266584_118268081_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006392.17_2	chr4	+	1143	7	FSM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118266562	118272306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118266584_118268081_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006392.17_5	chr4	+	1071	6	ISM	ENSMUSG00000006392.17	ENSMUST00000084319.11	1134	7	1559	2	1530	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118268092	118272306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_118268201_118268894_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006392.17_6	chr4	+	1109	6	ISM	ENSMUSG00000006392.17	ENSMUST00000019229.15	1145	7	1532	2	1532	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGCCATTCCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118268094	118272306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_118268201_118268854_118269000_118269548_118269690_118269860_118269943_118270823_118271073_118271920
ENSMUSG00000006395.17_0	chr4	+	910	8	FSM	ENSMUSG00000006395.17	ENSMUST00000194248.2	936	8	20	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTTCTCATATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	118217206	118219935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219695_118219780
ENSMUSG00000006395.17_2	chr4	+	785	8	FSM	ENSMUSG00000006395.17	ENST00000372432.5	806	8	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTGCATGCTGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	118217242	118219864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118217429_118217502_118217587_118218812_118218928_118219070_118219150_118219237_118219288_118219387_118219458_118219559_118219677_118219780
ENSMUSG00000006398.16_0	chr4	-	1781	10	FSM	ENSMUSG00000006398.16	ENSMUST00000006565.13	1793	10	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	5245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCCAGCATCCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	118294538	118290098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_118290339_118290677_118290796_118291947_118292074_118292669_118292899_118292973_118293069_118293165_118293363_118293456_118293586_118293706_118293804_118293890_118294040_118294137
ENSMUSG00000006403.14_0	chr1	+	4370	9	FSM	ENSMUSG00000006403.14	ENSMUST00000219033.2	4386	9	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGCCAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	171077997	171088195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171079039_171080105_171080430_171080655_171080789_171081461_171081633_171083716_171084004_171084096_171084284_171084523_171084700_171085287_171085464_171086320
ENSMUSG00000006412.11_0	chr1	+	1716	4	FSM	ENSMUSG00000006412.11	ENSMUST00000135941.8	1735	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTATGCCTGGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	171173248	171186814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171173355_171184097_171184187_171184272_171184397_171185417
ENSMUSG00000006418.18_0	chr2	+	2978	8	FSM	ENSMUSG00000006418.18	ENSMUST00000109214.8	3001	8	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATCCAACCAGTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	167334576	167358075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167335264_167341730_167341886_167345356_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006418.18_4	chr2	+	2479	6	FSM	ENSMUSG00000006418.18	ENSMUST00000078050.7	2502	6	14	9	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAGTAAGCTGCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	167345022	167358084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167345522_167348966_167349118_167352795_167352903_167353131_167353247_167354436_167354545_167356585
ENSMUSG00000006423.16_0	chrX	-	1112	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115249.10	1145	7	28	5	28	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGTACAGAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	36127863	36087394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36087823_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUSG00000006423.16_1	chrX	-	3325	7	FSM	ENSMUSG00000006423.16	ENSMUST00000115248.10	3340	7	4	11	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTAAACTAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36127895	36112206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661
ENSMUSG00000006423.16_2	chrX	-	3455	8	FSM	ENSMUSG00000006423.16	ENSMUST00000047486.6	3467	8	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAATGAACTAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	36137761	36112211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36120504_36120547_36127276_36127395_36127661_36127957_36137687
ENSMUSG00000006423.16_3	chrX	-	650	6	FSM	ENSMUSG00000006423.16	ENST00000536133.2	673	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGGAAGAGTAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36127771	36114715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36114816_36116291_36116385_36116982_36117073_36117935_36118075_36127276_36127395_36127661
ENSMUSG00000006435.17_0	chr19	+	4138	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111808.11	4158	6	10	10	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTGAGGGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	47167268	47247870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47167991_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ENSMUSG00000006435.17_2	chr19	+	3996	3	FSM	ENSMUSG00000006435.17	ENSMUST00000235326.2	4034	3	23	15	23	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAACCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47167483	47232035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47167991_47228240_47228483_47228788
ENSMUSG00000006435.17_3	chr19	+	3579	6	FSM	ENSMUSG00000006435.17	ENSMUST00000111807.5	3606	6	23	4	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCTGAGGGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	47217372	47247870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47217536_47228240_47228483_47228788_47229111_47241557_47242248_47245150_47245298_47245855
ENSMUSG00000006442.11_0	chr4	+	1326	7	FSM	ENSMUSG00000006442.11	ENSMUST00000006611.9	1338	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	148675970	148679075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148676244_148676500_148676622_148676938_148677032_148677744_148677899_148678224_148678455_148678539_148678663_148678743
ENSMUSG00000006445.4_0	chr4	+	3901	17	FSM	ENSMUSG00000006445.4	ENSMUST00000006614.3	3913	17	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGATTTTGGCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141028555	141056688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141028746_141033824_141033893_141035715_141036392_141043897_141044054_141044181_141044515_141045792_141045909_141046233_141046388_141047804_141047905_141048527_141048584_141048775_141048902_141049012_141049202_141049373_141049436_141049513_141049724_141049896_141050047_141050723_141050918_141051542_141051699_141055723
ENSMUSG00000006456.11_0	chr19	-	3143	3	FSM	ENSMUSG00000006456.11	ENSMUST00000006625.8	3165	3	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTACAGCAGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	4861647	4850603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4851834_4852578_4854044_4861199
ENSMUSG00000006456.11_1	chr19	-	705	2	FSM	ENSMUSG00000006456.11	ENST00000443702.1	715	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGGGCAAGCCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4861598	4853789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4854096_4861199
ENSMUSG00000006457.5_0	chr19	-	2870	21	FSM	ENSMUSG00000006457.5	ENSMUST00000006626.5	2887	21	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4927920	4911243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4911532_4911612_4911772_4912197_4912264_4912351_4912499_4913162_4913343_4913437_4913573_4913998_4914182_4914452_4914594_4914680_4914790_4915326_4915478_4917568_4917717_4917840_4918072_4918745_4918839_4919385_4919472_4920939_4921022_4921109_4921189_4921624_4921713_4921798_4921886_4922266_4922387_4922569_4922685_4927738
ENSMUSG00000006462.7_0	chr2	+	2547	2	FSM	ENSMUSG00000006462.7	ENSMUST00000130679.2	2555	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCCAAAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	167533100	167539713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167533181_167537246
ENSMUSG00000006462.7_1	chr2	+	2469	1	NIC	ENSMUSG00000006462.7	novel	2555	2	NA	NA	4144	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGCCAAAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	167537244	167539713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_167537200_167539700
ENSMUSG00000006463.14_0	chr19	+	2533	3	FSM	ENSMUSG00000006463.14	ENSMUST00000006632.8	2558	3	18	7	18	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGATCATGTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4928717	4935418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4929058_4930148_4930427_4933503
ENSMUSG00000006464.10_0	chr19	-	5521	16	ISM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	408	10	400	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAATGAATTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4956248	4936915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169
ENSMUSG00000006464.10_1	chr19	-	5588	17	FSM	ENSMUSG00000006464.10	ENSMUST00000053506.8	5602	17	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCATAATGAATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4956654	4936917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4940787_4941017_4941105_4941680_4941816_4942915_4943050_4944288_4944448_4944989_4945060_4947307_4947467_4947601_4947723_4949227_4949335_4950518_4950651_4952870_4952944_4953041_4953081_4953173_4953221_4953729_4954003_4956012_4956048_4956169_4956247_4956583
ENSMUSG00000006469.14_0	chr2	-	1823	12	ISM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	799	1	799	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGGTACCATAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25123428	25119063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314
ENSMUSG00000006469.14_1	chr2	-	1988	13	FSM	ENSMUSG00000006469.14	ENST00000538474.5	2000	13	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGGTACCATAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25124343	25119063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314_25123442_25124191
ENSMUSG00000006469.14_2	chr2	-	1869	13	FSM	ENSMUSG00000006469.14	ENST00000673835.1	1870	13	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGGGTACCATAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	25124227	25119063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25119528_25120584_25120710_25120784_25120902_25120987_25121156_25121234_25121323_25121432_25121500_25121667_25121876_25121962_25122075_25122158_25122303_25122391_25122521_25122979_25123067_25123314_25123439_25124191
ENSMUSG00000006471.19_2	chr2	-	1792	14	FSM	ENSMUSG00000006471.19	ENST00000371521.8	1804	14	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCCACTTGCTAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25145342	25137722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25137867_25137971_25138083_25138129_25138253_25138347_25138495_25138643_25138759_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006471.19_5	chr2	-	1745	14	FSM	ENSMUSG00000006471.19	ENST00000458322.2	1763	14	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCCACTTGCTAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25145336	25137722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25137867_25137971_25138067_25138133_25138253_25138347_25138495_25138643_25138738_25138916_25139025_25139111_25139333_25139416_25139539_25139805_25140016_25140107_25140210_25140291_25140391_25141732_25141831_25144875_25144954_25145228
ENSMUSG00000006476.20_0	chr2	+	2914	15	FSM	ENSMUSG00000006476.20	ENSMUST00000006646.15	2922	15	7	1	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24944402	24952892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_2	chr2	+	2819	14	FSM	ENSMUSG00000006476.20	ENSMUST00000074422.14	2824	14	4	1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24944428	24952892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24949032_24949086_24949616_24949707_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_6	chr2	+	2780	14	FSM	ENSMUSG00000006476.20	ENSMUST00000114388.8	2781	14	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24944446	24952892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24948264_24948334_24949032_24949086_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006476.20_7	chr2	+	855	6	NIC	ENSMUSG00000006476.20	novel	862	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24944467	24952892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_24944684_24945009_24945072_24947112_24947189_24948264_24948334_24949032_24949058_24952485
ENSMUSG00000006476.20_8	chr2	+	2650	13	NIC	ENSMUSG00000006476.20	novel	2863	15	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGTGTGGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24944507	24952892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_24944684_24945009_24945072_24945647_24946149_24947112_24947189_24949032_24949086_24950150_24950276_24950490_24950575_24950703_24950738_24950825_24950897_24951070_24951151_24951273_24951377_24951504_24951581_24951683
ENSMUSG00000006488.18_0	chr13	-	938	7	FSM	ENSMUSG00000006488.18	ENSMUST00000006659.8	940	7	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGTTTTAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	27826476	27817364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_27817684_27819673_27819854_27821535_27821647_27823063_27823103_27823833_27823873_27824623_27824800_27826402
ENSMUSG00000006488.18_1	chr13	-	839	6	ISM	ENSMUSG00000006488.18	ENSMUST00000095924.11	928	7	1673	16	1673	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGTTTTAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	27824774	27817364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_27817684_27819673_27819854_27821535_27821647_27823063_27823103_27823833_27823873_27824623
ENSMUSG00000006494.12_0	chr2	+	5172	11	FSM	ENSMUSG00000006494.12	ENSMUST00000006669.6	5185	11	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTCATATTTCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	71703579	71734201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71703910_71705749_71705892_71710382_71710455_71713766_71713952_71714186_71714277_71716325_71716404_71717725_71717803_71719239_71719339_71726032_71726144_71727990_71728105_71730327
ENSMUSG00000006498.17_0	chr10	+	3101	14	FSM	ENSMUSG00000006498.17	ENSMUST00000172282.8	3110	14	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCTGCCTGTCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	79690269	79700266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695950_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_15	chr10	+	3152	13	FSM	ENSMUSG00000006498.17	ENSMUST00000165704.8	3169	13	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTCCAGACCACG	NA	NA	NA	NA	NA	NA	NA	NA	79690468	79700594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79690556_79692337_79692369_79694585_79694659_79694785_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_31	chr10	+	2160	11	FSM	ENSMUSG00000006498.17	ENST00000394601.8	2174	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTATGTCCCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	79694790	79699741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79695106_79695185_79695357_79695435_79695547_79695614_79695790_79695971_79696029_79696657_79696804_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006498.17_8	chr10	+	1322	7	FSM	ENSMUSG00000006498.17	ENST00000627714.2	1336	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTATGTCCCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	79690449	79699741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79690556_79692337_79692369_79697847_79697882_79698282_79698376_79698486_79698704_79698811_79698890_79698978
ENSMUSG00000006517.6_0	chr8	-	1743	10	FSM	ENSMUSG00000006517.6	ENSMUST00000006692.6	1756	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTGTGGGCTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	123170148	123160339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123160915_123161542_123161652_123163212_123163329_123163748_123163968_123164153_123164229_123164565_123164766_123166115_123166263_123166376_123166492_123166920_123166992_123170032
ENSMUSG00000006526.14_0	chr14	+	3719	8	FSM	ENSMUSG00000006526.14	ENSMUST00000006701.8	3742	8	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGGAGACATGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30547561	30599159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30547848_30584836_30584886_30586385_30586482_30588579_30588702_30592707_30592821_30593437_30593516_30594506_30594657_30596334
ENSMUSG00000006527.17_0	chr14	+	2935	21	FSM	ENSMUSG00000006527.17	ENSMUST00000112184.10	2936	21	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATCTTTGCACTTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	30436806	30539920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30436924_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ENSMUSG00000006527.17_1	chr14	+	7831	21	FSM	ENSMUSG00000006527.17	ENSMUST00000054230.12	7837	21	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATATATGCGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30437574	30544675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30437833_30487919_30488059_30491755_30491851_30495841_30496083_30499860_30499950_30505899_30506147_30506657_30506747_30507770_30507873_30509413_30509565_30512690_30512774_30518282_30518410_30519532_30519647_30521697_30521741_30523814_30523877_30524488_30524629_30532252_30532363_30533345_30533522_30537030_30537210_30537364_30537611_30538704_30538834_30539664
ENSMUSG00000006529.17_0	chr14	-	2579	18	FSM	ENSMUSG00000006529.17	ENST00000273283.7	2593	18	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCTAACACAGCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	30664567	30651461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30651597_30651746_30651859_30652197_30652371_30653117_30653320_30654156_30654271_30654358_30654437_30655283_30655470_30656063_30656204_30657237_30657424_30657671_30657854_30658659_30658786_30658912_30659082_30659713_30659831_30659915_30660042_30662828_30662943_30663438_30663602_30663880_30663986_30664416
ENSMUSG00000006542.14_0	chr1	-	2811	14	FSM	ENSMUSG00000006542.14	ENSMUST00000188073.7	2832	14	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATATTTTTACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74788100	74778087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74779220_74779745_74779981_74780310_74780458_74780625_74780664_74783614_74783781_74783879_74784007_74784475_74784531_74784709_74784756_74784855_74784915_74785028_74785111_74786310_74786718_74787030_74787184_74787630_74787671_74787976
ENSMUSG00000006567.12_0	chr8	-	3670	16	FSM	ENSMUSG00000006567.12	ENST00000344297.9	3684	16	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTGTTCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22518744	22484672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501520_22501676_22501780_22501909_22502726_22502819_22508064_22508227_22510776_22510941_22512312_22512571_22517545
ENSMUSG00000006567.12_1	chr8	-	4095	19	FSM	ENSMUSG00000006567.12	ENST00000418097.7	4110	19	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTGTTCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22518743	22484672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545
ENSMUSG00000006567.12_2	chr8	-	4036	18	FSM	ENSMUSG00000006567.12	ENST00000448424.7	4053	18	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTGTTCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22518741	22484672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22503391_22503626_22508064_22508227_22510776_22510941_22512312_22512571_22517545
ENSMUSG00000006567.12_3	chr8	-	4053	19	FSM	ENSMUSG00000006567.12	ENST00000673772.1	4071	19	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGAGTGTTCTCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	22518740	22484672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22484941_22485569_22485673_22487301_22487420_22487498_22487703_22488240_22488384_22490064_22490209_22492723_22492878_22494208_22494392_22496275_22496471_22501030_22501166_22501520_22501676_22501780_22501909_22502726_22502819_22504528_22504704_22505893_22505971_22508064_22508227_22510776_22510941_22512312_22512571_22517545
ENSMUSG00000006575.15_0	chr11	+	2012	11	FSM	ENSMUSG00000006575.15	ENSMUST00000006750.8	2046	11	25	9	25	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGAAGTGGTTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	102284253	102293372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102284609_102288396_102288513_102288910_102289060_102289202_102289289_102290020_102290111_102290208_102290290_102290440_102290607_102290713_102290872_102291486_102291625_102291719_102291827_102292806
ENSMUSG00000006576.17_0	chr1	+	7154	23	FSM	ENSMUSG00000006576.17	ENSMUST00000124341.8	7182	23	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATTTGATCCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	75522930	75538809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75523027_75523415_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270_75534445_75535456
ENSMUSG00000006576.17_15	chr1	+	3637	21	ISM	ENSMUSG00000006576.17	ENST00000317151.7	3699	22	274	5	274	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGTAAGGGCTGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	75523478	75534439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270
ENSMUSG00000006576.17_3	chr1	+	3694	22	FSM	ENSMUSG00000006576.17	ENST00000317151.7	3699	22	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGTAAGGGCTGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	75523204	75534439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75523258_75523474_75523566_75523876_75524043_75524587_75524866_75524959_75525076_75525512_75525710_75527147_75527297_75527398_75527580_75527890_75528027_75528280_75528465_75528796_75528897_75529266_75529452_75529899_75530126_75530267_75530487_75530803_75530953_75531145_75531341_75531566_75531786_75532054_75532145_75532582_75532750_75533387_75533642_75533916_75534087_75534270
ENSMUSG00000006585.4_0	chr8	+	2175	10	FSM	ENSMUSG00000006585.4	ENSMUST00000006760.3	2189	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATGAAGCTGAACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	123294761	123299861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123295011_123295825_123295985_123296062_123296215_123296642_123296841_123296932_123297079_123297179_123297278_123297979_123298169_123298434_123298588_123298675_123298878_123299232
ENSMUSG00000006589.9_1	chr8	-	831	5	FSM	ENSMUSG00000006589.9	ENSMUST00000006764.9	849	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2853	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGCTGCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	123303617	123301381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123301767_123301875_123301955_123302140_123302275_123303253_123303361_123303491
ENSMUSG00000006599.14_0	chr7	+	2723	15	FSM	ENSMUSG00000006599.14	ENSMUST00000006774.11	2736	15	10	3	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46445536	46473221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46445713_46451095_46451265_46453240_46453434_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006599.14_6	chr7	+	2514	14	FSM	ENSMUSG00000006599.14	ENST00000534641.5	2524	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGCCTCTCTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46445552	46473221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46445713_46451095_46451265_46454384_46454548_46456159_46456254_46457960_46458111_46458223_46458304_46461855_46461984_46462085_46462174_46463539_46463629_46464723_46464842_46465807_46465899_46466320_46466437_46468545_46468639_46472246
ENSMUSG00000006611.16_0	chr13	-	3529	6	FSM	ENSMUSG00000006611.16	ENSMUST00000091706.14	3572	6	38	5	38	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGCCATTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	23894799	23886021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23888410_23889606_23889718_23889843_23890120_23890749_23891050_23892010_23892275_23894609
ENSMUSG00000006611.16_1	chr13	-	518	2	FSM	ENSMUSG00000006611.16	ENST00000317896.11	528	2	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTCTTGGGGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	23892265	23889856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23890120_23892010
ENSMUSG00000006638.16_0	chr5	+	1341	9	FSM	ENSMUSG00000006638.16	ENSMUST00000201125.4	1352	9	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGCTGAGGTTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31107418	31112433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31107593_31110228_31110390_31110686_31110870_31111010_31111057_31111222_31111336_31111434_31111610_31111748_31111798_31111877_31112044_31112159
ENSMUSG00000006641.13_0	chr5	-	3170	18	FSM	ENSMUSG00000006641.13	ENSMUST00000080431.8	3218	18	42	6	42	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGTGTCTGGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31206226	31193385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201936_31204973_31205144_31206095
ENSMUSG00000006641.13_1	chr5	-	3071	18	FSM	ENSMUSG00000006641.13	ENSMUST00000202556.4	3078	18	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTGGTGTCTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31205353	31193387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201926_31204973_31205144_31205309
ENSMUSG00000006641.13_2	chr5	-	3024	17	ISM	ENSMUSG00000006641.13	ENSMUST00000202556.4	3078	18	213	7	206	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCTGGTGTCTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31205140	31193387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_31194298_31194446_31194563_31194752_31194857_31195057_31195237_31195357_31195445_31196285_31196354_31196647_31196761_31197097_31197187_31197705_31197836_31198001_31198143_31198487_31198643_31198887_31198956_31199481_31199534_31199922_31199989_31200293_31200804_31201856_31201926_31204973
ENSMUSG00000006642.4_0	chr5	+	4102	3	FSM	ENSMUSG00000006642.4	ENSMUST00000006818.4	4116	3	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGCTGACATTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	31126018	31134361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31126342_31127418_31127662_31130825
ENSMUSG00000006651.9_0	chr7	-	2321	17	FSM	ENSMUSG00000006651.9	ENSMUST00000006828.9	2343	17	18	4	18	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCATCCCGTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30144942	30134410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30134817_30134900_30135045_30135170_30135234_30135397_30135469_30135603_30135628_30136211_30136320_30137602_30137703_30139359_30139489_30139568_30139728_30140479_30140555_30141066_30141198_30141594_30141786_30141904_30142039_30142222_30142336_30142516_30142650_30143742_30143887_30144746
ENSMUSG00000006673.15_0	chr9	+	3050	11	FSM	ENSMUSG00000006673.15	ENST00000357496.6	3067	11	13	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACACCCTTCTTTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	108394307	108437140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108394440_108395965_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_1	chr9	+	3012	10	FSM	ENSMUSG00000006673.15	ENSMUST00000112155.9	3040	10	13	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAAAAACTTTACCATG	NA	NA	NA	NA	NA	NA	NA	NA	108394321	108437176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108394440_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006673.15_2	chr9	+	3320	11	FSM	ENSMUSG00000006673.15	ENSMUST00000006851.15	3331	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCTACTGGAGAACGT	NA	NA	NA	NA	NA	NA	NA	NA	108394320	108437359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108394440_108395901_108396026_108405787_108406118_108410785_108411818_108418886_108419065_108419630_108419786_108422061_108422177_108433160_108433270_108433606_108433759_108434156_108434248_108436444
ENSMUSG00000006675.11_0	chr9	-	1818	9	FSM	ENSMUSG00000006675.11	ENSMUST00000006853.11	1841	9	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAAGCGCCCGCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	108474849	108456066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108456508_108456914_108457039_108457214_108457306_108457917_108458104_108459040_108459204_108460045_108460143_108460840_108461032_108474097_108474180_108474406
ENSMUSG00000006675.11_2	chr9	-	1280	3	FSM	ENSMUSG00000006675.11	ENSMUST00000193621.2	1297	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCAAGCCCCGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	108474769	108460196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108461032_108474097_108474180_108474406
ENSMUSG00000006676.17_5	chr9	+	4544	26	FSM	ENSMUSG00000006676.17	ENST00000398888.6	4557	26	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCAATCTTGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108367902	108378890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108368095_108369669_108369930_108370042_108370200_108370289_108370464_108370548_108370683_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108378392
ENSMUSG00000006676.17_8	chr9	+	4710	27	FSM	ENSMUSG00000006676.17	ENST00000453664.5	4726	27	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTAAAAATTGTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	108367906	108379433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108368095_108369669_108369930_108370042_108370200_108370289_108370464_108370548_108370653_108370759_108371063_108371214_108371438_108371565_108371723_108371825_108371898_108372010_108372127_108372238_108372454_108372735_108372932_108373009_108373144_108373268_108373428_108373503_108373615_108374050_108374162_108374264_108374367_108375094_108375236_108375321_108375441_108375640_108375779_108375878_108376193_108376293_108376405_108376492_108376710_108376790_108376944_108377048_108377210_108377289_108377469_108379038
ENSMUSG00000006678.7_0	chrX	-	5332	37	FSM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAACCAGTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	92675758	92348383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093_92670219_92675674
ENSMUSG00000006678.7_2	chrX	-	5236	36	ISM	ENSMUSG00000006678.7	ENSMUST00000006856.3	5346	37	5555	11	5555	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAACCAGTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	92670206	92348383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_92349423_92419196_92419291_92464172_92464290_92504974_92505107_92506899_92507079_92517918_92518094_92524084_92524217_92531700_92531834_92534348_92534555_92536324_92536418_92537154_92537188_92604973_92605097_92605475_92605626_92616713_92616839_92619384_92619485_92621102_92621223_92621682_92621813_92624327_92624504_92625623_92625741_92628191_92628282_92629449_92629512_92630603_92630689_92635011_92635167_92637424_92637564_92638379_92638455_92639720_92639838_92640823_92640937_92646806_92646980_92647067_92647270_92647515_92647604_92648012_92648106_92648956_92649020_92649453_92649570_92664110_92664192_92667424_92667522_92670093
ENSMUSG00000006699.18_0	chr4	-	2024	5	ISM	ENSMUSG00000006699.18	ENST00000344548.7	2214	7	21592	4	21571	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAGCCTGAAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	137063439	137047014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285
ENSMUSG00000006699.18_1	chr4	-	2096	6	FSM	ENSMUSG00000006699.18	ENSMUST00000051477.13	2108	6	4	8	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAGCCTGAAGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	137085027	137047014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084956
ENSMUSG00000006699.18_17	chr4	-	2231	6	FSM	ENSMUSG00000006699.18	ENST00000400259.5	2249	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGTATTAAACAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	137085061	137047039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_137048504_137056023_137056222_137056325_137056436_137059717_137059791_137063285_137063441_137084830
ENSMUSG00000006705.14_0	chr17	+	4238	11	FSM	ENSMUSG00000006705.14	ENSMUST00000097352.11	4252	11	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATTGATTCTGTAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	31783720	31826666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31783863_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUSG00000006705.14_6	chr17	+	2162	12	FSM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTGGATTATGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31783835	31824458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31783863_31800777_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUSG00000006705.14_7	chr17	+	2135	11	ISM	ENSMUSG00000006705.14	ENSMUST00000175806.9	2170	12	16942	8	-1740	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTGGATTATGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31800777	31824458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_31801025_31802669_31802778_31807433_31807562_31809576_31809749_31811078_31811250_31814198_31814299_31815769_31815868_31818488_31818618_31821759_31821837_31822160_31822334_31823726
ENSMUSG00000006711.16_0	chr13	+	3578	19	FSM	ENSMUSG00000006711.16	ENST00000535378.5	3586	19	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAACCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25038469	25084422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_25038516_25040648_25041411_25041903_25042094_25046620_25046720_25047576_25047675_25048715_25048804_25051071_25051165_25055236_25055374_25056201_25056357_25062008_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_12	chr13	+	2192	12	FSM	ENSMUSG00000006711.16	ENST00000616673.4	2210	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAACCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25055246	25084422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_25055374_25056201_25056357_25062008_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006711.16_8	chr13	+	3524	18	ISM	ENSMUSG00000006711.16	ENST00000535378.5	3586	19	2187	8	2187	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAGAAACCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25040656	25084422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_25041411_25041903_25042094_25046620_25046720_25047576_25047675_25048715_25048804_25051071_25051165_25055236_25055374_25056201_25056357_25062008_25062051_25063578_25063728_25064752_25064905_25066523_25066663_25067723_25067884_25069560_25069704_25071818_25071942_25073806_25073898_25077343_25077436_25083603
ENSMUSG00000006715.12_0	chr13	-	948	7	FSM	ENSMUSG00000006715.12	ENSMUST00000110382.9	963	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTATGTCGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24945900	24935836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945795
ENSMUSG00000006715.12_1	chr13	-	1102	7	FSM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTATGTCGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24945828	24935836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142_24944201_24945569
ENSMUSG00000006715.12_2	chr13	-	843	6	ISM	ENSMUSG00000006715.12	ENSMUST00000006898.10	1127	7	1644	9	1644	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGTATGTCGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	24944200	24935836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_24936214_24937330_24937442_24937640_24937724_24940582_24940719_24941578_24941657_24944142
ENSMUSG00000006717.8_0	chr13	-	700	3	FSM	ENSMUSG00000006717.8	ENSMUST00000006900.7	721	3	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCAGAAGTAGCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25015492	25001943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_25002175_25004697_25004883_25015208
ENSMUSG00000006720.17_0	chr13	+	2697	6	FSM	ENSMUSG00000006720.17	ENSMUST00000176511.8	2703	6	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTTTAAGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	22129267	22144653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22129370_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUSG00000006720.17_1	chr13	+	3189	6	FSM	ENSMUSG00000006720.17	ENSMUST00000102978.8	3198	6	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTAAGTGAGAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	22129282	22144941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22129589_22129725_22129970_22131172_22131241_22133829_22133957_22134403_22134500_22142593
ENSMUSG00000006720.17_3	chr13	+	660	2	FSM	ENSMUSG00000006720.17	ENST00000374435.3	688	2	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACAGGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	22142966	22144047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22143321_22143741
ENSMUSG00000006728.13_0	chr10	+	2036	8	FSM	ENSMUSG00000006728.13	ENSMUST00000006911.12	2053	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGGGCCATACAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	126899412	126903782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126899629_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006728.13_11	chr10	+	351	3	FSM	ENSMUSG00000006728.13	ENST00000549606.5	366	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTACTGGACCTGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	126899460	126902101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126899629_126901821_126901873_126901969
ENSMUSG00000006728.13_8	chr10	+	1374	8	FSM	ENSMUSG00000006728.13	ENST00000257904.11	1391	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGGGGAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	126899504	126903208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126899633_126900088_126900323_126900453_126900590_126900703_126900872_126901023_126901134_126901821_126901873_126901969_126902106_126902797
ENSMUSG00000006731.11_2	chr10	+	2378	11	FSM	ENSMUSG00000006731.11	ENSMUST00000006914.11	2395	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCATTTTTACTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	127001103	127008192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127001389_127001872_127002092_127002586_127002752_127002867_127002975_127003370_127003412_127003569_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUSG00000006731.11_6	chr10	+	887	4	FSM	ENSMUSG00000006731.11	ENST00000552350.5	910	4	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGAGCTGGAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127001882	127003941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127002092_127002586_127002752_127002867_127002975_127003535
ENSMUSG00000006731.11_7	chr10	+	1729	8	FSM	ENSMUSG00000006731.11	ENST00000418555.6	1748	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAAGACCCTCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	127001880	127008008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127002092_127002867_127002975_127003535_127003751_127005612_127005712_127005846_127006038_127006459_127006601_127006787_127007029_127007484
ENSMUSG00000006732.15_0	chr10	+	1775	6	FSM	ENSMUSG00000006732.15	ENSMUST00000006915.14	1791	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATGTGTTTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126877810	126882228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126877940_126878928_126879093_126880335_126880521_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_2	chr10	+	611	5	FSM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGACCCCCTAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126877855	126881294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126877940_126878928_126879093_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006732.15_3	chr10	+	527	4	ISM	ENSMUSG00000006732.15	ENST00000257848.7	615	5	1077	0	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCCAGACCCCCTAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	126878928	126881294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_126879093_126880624_126880739_126880894_126880997_126881147
ENSMUSG00000006736.10_0	chr10	-	1545	6	FSM	ENSMUSG00000006736.10	ENSMUST00000060991.6	1556	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTTGTTTTCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	126906122	126903148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126904060_126904137_126904252_126904348_126904481_126904776_126904858_126905214_126905383_126905983
ENSMUSG00000006740.15_0	chr18	-	6013	26	FSM	ENSMUSG00000006740.15	ENSMUST00000025083.14	6032	26	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	3031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTACTTCATGACGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6241511	6201008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_6203708_6208186_6208336_6208999_6209217_6210699_6210805_6211023_6211096_6211191_6211253_6212516_6212619_6213186_6213297_6213392_6213455_6213969_6214088_6214511_6214701_6216222_6216367_6216740_6216948_6220223_6220293_6220801_6220996_6222718_6222868_6223545_6223692_6223970_6224076_6225317_6225443_6225596_6225685_6225767_6225824_6226381_6226431_6226863_6226969_6227587_6227662_6234814_6234903_6240981
ENSMUSG00000006763.15_0	chr7	-	4708	12	FSM	ENSMUSG00000006763.15	ENSMUST00000143082.4	4728	12	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGACCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46360094	46335541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46338880_46339226_46339320_46342202_46342400_46348787_46348977_46349059_46349143_46351204_46351386_46351825_46351942_46352044_46352105_46353437_46353518_46356416_46356501_46358287_46358402_46359921
ENSMUSG00000006764.9_0	chr10	-	2590	11	FSM	ENSMUSG00000006764.9	ENSMUST00000006949.9	2626	11	34	2	34	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGGTATCTCTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	115020893	114914547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_114915747_114915879_114916014_114926606_114926703_114955729_114955857_114981895_114982032_114986989_114987187_115009956_115010025_115015226_115015328_115015427_115015612_115018660_115018805_115020689
ENSMUSG00000006782.17_0	chr11	+	2339	4	FSM	ENSMUSG00000006782.17	ENSMUST00000103120.5	2357	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCAGCTGTGTGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	100465740	100472547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100465895_100467061_100467732_100469738_100469879_100471172
ENSMUSG00000006784.15_0	chr11	+	2214	12	FSM	ENSMUSG00000006784.15	ENSMUST00000092684.12	2240	12	23	3	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATCTTGAGTGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	100436455	100462786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100436735_100440628_100440761_100441010_100441162_100441781_100441844_100442296_100442463_100444315_100444541_100444689_100444898_100452643_100452731_100454355_100454553_100457734_100457836_100460681_100460767_100462265
ENSMUSG00000006800.15_1	chr2	-	4556	21	FSM	ENSMUSG00000006800.15	ENSMUST00000109249.9	4580	21	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCCCAAATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	165997568	165915017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165997422
ENSMUSG00000006800.15_5	chr2	-	3776	22	FSM	ENSMUSG00000006800.15	ENSMUST00000146497.9	3808	22	26	6	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	165997557	165915839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165983633_165983687_165997422
ENSMUSG00000006800.15_7	chr2	-	3917	21	FSM	ENSMUSG00000006800.15	ENSMUST00000088086.4	3927	21	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGCTATCTTGGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	165997195	165915839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165916739_165917414_165917469_165917691_165917726_165919437_165919562_165920956_165921100_165921379_165921550_165921936_165921997_165922716_165922812_165923206_165923304_165923397_165923627_165924493_165924705_165925775_165925906_165926305_165926363_165927602_165927732_165928905_165929082_165931117_165931269_165935374_165935545_165936397_165936550_165958791_165959032_165974507_165974775_165996866
ENSMUSG00000006818.6_11	chr17	+	476	3	FSM	ENSMUSG00000006818.6	ENST00000337404.8	497	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAACCTCACTCACGG	NA	NA	NA	NA	NA	NA	NA	NA	13227117	13234052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13227274_13232319_13232500_13233912
ENSMUSG00000006818.6_3	chr17	+	5834	5	FSM	ENSMUSG00000006818.6	ENSMUST00000007012.6	5861	5	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	13226712	13239003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13226956_13227070_13227274_13229406_13229524_13232319_13232500_13233912
ENSMUSG00000006850.9_0	chr18	+	1810	12	FSM	ENSMUSG00000006850.9	ENSMUST00000007046.9	1823	12	5	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAACTACTTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	36868125	36875442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871680_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006850.9_11	chr18	+	1390	11	ISM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	220	8	220	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCTGCTACCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	36868444	36875193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006850.9_6	chr18	+	1473	12	FSM	ENSMUSG00000006850.9	ENST00000252100.6	1487	12	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCTGCTACCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	36868230	36875193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36868310_36868440_36868554_36870509_36870626_36870721_36870906_36871148_36871254_36871414_36871501_36871663_36871798_36872005_36872118_36872207_36872395_36874104_36874200_36874714_36874883_36875099
ENSMUSG00000006906.11_1	chr6	-	2351	10	FSM	ENSMUSG00000006906.11	ENSMUST00000068054.9	2364	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTTGTGCTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83549703	83520210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83521019_83524212_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549392
ENSMUSG00000006906.11_6	chr6	-	1400	10	FSM	ENSMUSG00000006906.11	ENST00000394073.6	1407	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549390	83524212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549006_83549093_83549308
ENSMUSG00000006906.11_7	chr6	-	1318	9	FSM	ENSMUSG00000006906.11	ENST00000394070.7	1654	9	336	0	305	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83549092	83524212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83539024_83540804_83540901_83541162_83541239_83547284_83547502_83549006
ENSMUSG00000006906.11_8	chr6	-	1119	9	FSM	ENSMUSG00000006906.11	ENST00000682352.1	1128	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATCTATGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	83547478	83524212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83524313_83528925_83529039_83533256_83533395_83534418_83534544_83538656_83538748_83538837_83539024_83540804_83540901_83541162_83541239_83547284
ENSMUSG00000006920.15_0	chr11	-	4185	21	FSM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCCATTTTGGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101117276	101081949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479_101109547_101117221
ENSMUSG00000006920.15_12	chr11	-	3629	15	FSM	ENSMUSG00000006920.15	ENSMUST00000100417.3	3636	15	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCATATTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101117252	101088221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479_101109547_101117221
ENSMUSG00000006920.15_13	chr11	-	3590	14	ISM	ENSMUSG00000006920.15	ENSMUST00000100417.3	3636	15	7714	7	-1346	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCATATTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101109538	101088221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108195_101109479
ENSMUSG00000006920.15_15	chr11	-	3534	13	ISM	ENSMUSG00000006920.15	ENSMUST00000100417.3	3636	15	9055	7	-5	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTCATATTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101108197	101088221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068
ENSMUSG00000006920.15_2	chr11	-	4124	20	ISM	ENSMUSG00000006920.15	ENSMUST00000107285.8	4193	21	7739	5	-1345	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCATTTTGGCAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101109537	101081946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101106008_101106129_101107820_101107950_101108068_101108190_101109479
ENSMUSG00000006920.15_7	chr11	-	2224	18	FSM	ENSMUSG00000006920.15	ENST00000585893.5	2243	18	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGCATAACTAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101108177	101083656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101083826_101084044_101084130_101084551_101084633_101085293_101085376_101085711_101085808_101086344_101086524_101090083_101090210_101090771_101090813_101091661_101091754_101094080_101094278_101094586_101094768_101098163_101098256_101098947_101099112_101100205_101100309_101101372_101101550_101104549_101104671_101107820_101107950_101108068
ENSMUSG00000006930.16_0	chr11	-	3309	12	FSM	ENSMUSG00000006930.16	ENSMUST00000138603.9	3316	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATCTGCCCTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	100246954	100238159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100239686_100240062_100240446_100242035_100242128_100242243_100242379_100242668_100242732_100243010_100243142_100244369_100244437_100244513_100244614_100244782_100244962_100245071_100245189_100245497_100245575_100246515
ENSMUSG00000006931.16_0	chr11	-	2160	8	FSM	ENSMUSG00000006931.16	ENSMUST00000066489.13	2178	8	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACCTGAGGCCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	100305653	100299290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100299971_100300188_100300334_100301939_100302024_100302554_100302701_100303526_100303656_100304434_100304607_100304752_100304906_100305002
ENSMUSG00000006932.18_17	chr9	+	3374	16	FSM	ENSMUSG00000006932.18	ENST00000396185.8	3388	16	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTTGTGTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120762454	120789568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_29	chr9	+	3602	15	FSM	ENSMUSG00000006932.18	ENSMUST00000007130.15	3623	15	15	6	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCACTTGTGTCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	120762480	120789567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUSG00000006932.18_42	chr9	+	2763	16	FSM	ENSMUSG00000006932.18	ENST00000647390.1	2785	16	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATGGCGTTATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	120762547	120789072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120762683_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_58	chr9	+	2981	15	FSM	ENSMUSG00000006932.18	ENST00000644873.1	2998	15	8	9	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACCCTAGCCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120762616	120789085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120762705_120779238_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786175_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374
ENSMUSG00000006932.18_70	chr9	+	2596	15	FSM	ENSMUSG00000006932.18	ENST00000431914.6	2598	15	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGTTATCAAACCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	120779277	120789079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_80	chr9	+	2446	15	FSM	ENSMUSG00000006932.18	ENST00000450969.6	2454	15	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTAGCCTTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120779277	120789088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120779300_120779587_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789009
ENSMUSG00000006932.18_98	chr9	+	2566	14	ISM	ENSMUSG00000006932.18	ENST00000431914.6	2598	15	320	0	320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATCAAACCCTAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120779597	120789081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120788850
ENSMUSG00000006932.18_99	chr9	+	2415	14	ISM	ENSMUSG00000006932.18	ENST00000450969.6	2454	15	319	8	319	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTAGCCTTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120779596	120789088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_120779816_120779959_120780214_120780332_120780572_120780651_120780854_120781924_120782070_120784213_120784318_120784394_120784734_120784879_120785039_120786172_120786293_120786582_120786734_120786824_120786947_120787657_120787719_120788374_120788596_120789009
ENSMUSG00000006941.6_0	chr9	+	1021	4	FSM	ENSMUSG00000006941.6	ENSMUST00000007139.6	1035	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAGCCAGCAATGCACT	NA	NA	NA	NA	NA	NA	NA	NA	120321564	120324390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120321908_120323172_120323337_120323600_120323703_120323978
ENSMUSG00000006958.15_0	chr16	+	2397	14	FSM	ENSMUSG00000006958.15	ENSMUST00000115423.8	2417	14	7	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAAAACCCTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	20551883	20556889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091
ENSMUSG00000006958.15_1	chr16	+	3260	23	FSM	ENSMUSG00000006958.15	ENSMUST00000007171.13	3275	23	9	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTGGGTTTGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	20551885	20561128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20552046_20552280_20552385_20552756_20552887_20553022_20553152_20553236_20553337_20553435_20553524_20553866_20554009_20554120_20554250_20554330_20554414_20554495_20554644_20554786_20554894_20555013_20555134_20555658_20555816_20556091_20556313_20556943_20557058_20557302_20557567_20557653_20557748_20557860_20557915_20558156_20558261_20558703_20558807_20559939_20560095_20560245_20560346_20560674
ENSMUSG00000006998.17_0	chr16	+	2943	21	FSM	ENSMUSG00000006998.17	ENSMUST00000007212.9	2961	21	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCAAGGTCTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20470411	20482156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20470602_20470993_20471051_20471342_20471508_20473297_20473420_20473567_20473793_20474002_20474162_20474308_20474454_20474630_20474692_20475292_20475440_20475617_20475725_20476231_20476360_20476723_20476812_20478155_20478319_20478428_20478531_20478706_20478853_20479092_20479177_20480314_20480484_20480565_20480661_20480842_20480970_20481371_20481491_20481812
ENSMUSG00000007021.6_0	chr17	-	1941	4	FSM	ENSMUSG00000007021.6	ENSMUST00000007236.5	1965	4	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCAGTAAGGTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24908911	24904071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24905415_24905492_24905636_24906476_24906715_24908694
ENSMUSG00000007021.6_1	chr17	-	1052	3	FSM	ENSMUSG00000007021.6	ENST00000618464.1	1072	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGTACGTGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	24908790	24904090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24904855_24906522_24906715_24908694
ENSMUSG00000007029.17_0	chr17	+	4124	30	FSM	ENSMUSG00000007029.17	ENSMUST00000087315.14	4137	30	13	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35219975	35235298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35220209_35220387_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ENSMUSG00000007029.17_15	chr17	+	4057	30	FSM	ENSMUSG00000007029.17	ENST00000375663.8	4068	30	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTCGCTCTTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35220059	35235298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35220193_35220354_35220807_35223180_35223316_35223412_35223552_35223747_35223870_35223952_35224038_35224225_35224327_35224450_35224579_35229481_35229647_35229813_35229896_35230180_35230301_35230382_35230492_35230575_35230671_35230783_35230875_35231064_35231190_35231272_35231377_35231465_35231625_35231705_35231797_35231905_35232012_35232097_35232169_35232240_35232367_35232618_35232724_35232803_35232873_35233001_35233081_35233209_35233338_35233597_35233754_35233912_35234120_35234340_35234453_35234569_35234896_35235162
ENSMUSG00000007034.16_0	chr17	+	2251	21	FSM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	0	10	0	-10	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTTGATAAGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	35133445	35149322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35133497_35135622_35135672_35136293_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ENSMUSG00000007034.16_4	chr17	+	2205	20	ISM	ENSMUSG00000007034.16	ENSMUST00000007249.15	2261	21	2181	1	-1068	-1	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTATGGCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	35135626	35149331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_35135672_35136293_35136368_35136492_35136572_35137214_35137315_35137395_35137519_35137820_35137882_35140040_35140132_35140207_35140292_35140503_35140740_35140837_35140938_35142403_35142497_35142723_35142827_35146649_35146901_35146993_35147089_35147181_35147286_35147395_35147470_35147610_35147682_35147783_35147879_35147954_35148040_35149090
ENSMUSG00000007035.16_0	chr17	-	2875	24	FSM	ENSMUSG00000007035.16	ENSMUST00000007250.14	2886	24	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATCAAGGTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	35265596	35247589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35247829_35248171_35248246_35248628_35248767_35248853_35248998_35249176_35249252_35249584_35249735_35250123_35250251_35250329_35250520_35250654_35250743_35251316_35251398_35251735_35251846_35252198_35252272_35252565_35252695_35257381_35257445_35258176_35258316_35260445_35260492_35261073_35261157_35262704_35262741_35263000_35263111_35263292_35263415_35264089_35264153_35264269_35264351_35264905_35265030_35265206
ENSMUSG00000007036.16_0	chr17	+	1928	20	FSM	ENSMUSG00000007036.16	ENSMUST00000007251.14	1945	20	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTGGCTGCTTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	35308279	35321959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35308433_35309344_35309402_35309997_35310065_35310546_35310634_35313226_35313313_35315279_35315354_35315457_35315581_35317669_35317785_35317874_35317977_35319310_35319375_35319614_35319665_35319937_35320062_35320217_35320323_35320517_35320582_35320803_35320861_35320945_35321009_35321121_35321199_35321273_35321373_35321450_35321498_35321645
ENSMUSG00000007038.6_0	chr17	+	2462	6	FSM	ENSMUSG00000007038.6	ENSMUST00000007253.6	2474	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35150235	35154892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35150524_35150891_35151085_35151541_35151805_35152978_35153162_35153258_35153482_35153580
ENSMUSG00000007039.13_0	chr17	+	1332	7	FSM	ENSMUSG00000007039.13	ENSMUST00000007255.13	1342	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGGGCTGTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35278018	35281065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_5	chr17	+	1296	7	FSM	ENSMUSG00000007039.13	ENST00000375787.6	1313	7	14	3	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGGGCTGTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35278053	35281065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35278253_35279083_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280602_35280766
ENSMUSG00000007039.13_7	chr17	+	1234	7	FSM	ENSMUSG00000007039.13	ENSMUST00000174493.8	1254	7	14	6	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAAGGGCTGTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35278090	35281065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35278249_35279078_35279438_35279578_35279679_35279808_35279883_35279980_35280101_35280451_35280576_35280766
ENSMUSG00000007041.10_0	chr17	+	1450	6	FSM	ENSMUSG00000007041.10	ENSMUST00000007257.10	1466	6	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	11009	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAAAGACGGCTTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	35268950	35277718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35269463_35271410_35271521_35271756_35271883_35272008_35272116_35274202_35274385_35277305
ENSMUSG00000007050.18_0	chr17	+	824	5	FSM	ENSMUSG00000007050.18	ENSMUST00000114011.11	840	5	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAATTCCTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35200863	35204859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35201062_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUSG00000007050.18_1	chr17	+	858	5	FSM	ENSMUSG00000007050.18	ENSMUST00000007266.14	873	5	7	8	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGAATTCCTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35201111	35204859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35201344_35201595_35201664_35204084_35204116_35204224_35204285_35204392
ENSMUSG00000007080.15_0	chr5	+	7147	49	FSM	ENSMUSG00000007080.15	ENSMUST00000007296.12	7163	49	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAAAGCTCTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110434180	110485333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110434316_110437098_110437241_110437647_110437729_110438091_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUSG00000007080.15_19	chr5	+	6475	45	ISM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	189	5	189	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAAGCCCTGTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	110438280	110485083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478928_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUSG00000007080.15_30	chr5	+	1516	9	FSM	ENSMUSG00000007080.15	ENSMUST00000112481.2	1523	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTCTGTTTTATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	110478562	110485312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110478701_110478794_110478937_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUSG00000007080.15_7	chr5	+	6530	46	FSM	ENSMUSG00000007080.15	ENST00000535270.5	6535	46	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGACAAGCCCTGTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	110438091	110485083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110438137_110438270_110438364_110438824_110438980_110441125_110441268_110441580_110441662_110442374_110442483_110442757_110442869_110443093_110443180_110443383_110443504_110444871_110445005_110445213_110445328_110445598_110445812_110446106_110446215_110446757_110446887_110446965_110447069_110447154_110447302_110447638_110447785_110449873_110450023_110451440_110451534_110451720_110451866_110454192_110454351_110454632_110454829_110456801_110457017_110459872_110459976_110460599_110460681_110460771_110460895_110465655_110465866_110466091_110466302_110466481_110466626_110471403_110471545_110471795_110471950_110472025_110472133_110472286_110472464_110472545_110472770_110472949_110473171_110473377_110473583_110475567_110475742_110477411_110477538_110478794_110478928_110480247_110480426_110482026_110482159_110482288_110482483_110483705_110483907_110484239_110484366_110484823_110484914_110484997
ENSMUSG00000007097.15_2	chr1	-	3182	23	FSM	ENSMUSG00000007097.15	ENST00000392233.7	3194	23	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGGGGAGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	172125533	172102189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172102297_172103484_172103544_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138_172121244_172125447
ENSMUSG00000007097.15_3	chr1	-	3097	22	ISM	ENSMUSG00000007097.15	ENST00000392233.7	3194	23	4296	5	4296	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGGGGAGTCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	172121244	172102189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_172102297_172103484_172103544_172103687_172103790_172105823_172105955_172106101_172106248_172106437_172106562_172106879_172107035_172107234_172107404_172107502_172107654_172108135_172108273_172112066_172112243_172112335_172112526_172113220_172113356_172113530_172113641_172113764_172113964_172114766_172115036_172116867_172116986_172117819_172117955_172118177_172118292_172118759_172118964_172120893_172120954_172121138
ENSMUSG00000007122.12_0	chr1	-	1832	11	FSM	ENSMUSG00000007122.12	ENSMUST00000003554.11	1847	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGCAAGTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	172047427	172037467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172038071_172039514_172039590_172040594_172040696_172040903_172040959_172041372_172041419_172042578_172042710_172043043_172043118_172043475_172043588_172044360_172044462_172045456_172045542_172046978
ENSMUSG00000007207.11_0	chr5	+	2146	10	FSM	ENSMUSG00000007207.11	ENSMUST00000005509.11	2162	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTAGTGAGCCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	135052344	135079947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135052465_135065979_135066058_135066329_135066430_135070090_135070166_135070784_135070859_135070962_135071072_135071446_135071521_135074450_135074589_135077847_135077959_135078680
ENSMUSG00000007216.7_0	chr6	+	4139	3	FSM	ENSMUSG00000007216.7	ENSMUST00000204095.3	4143	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAAAAAAAATGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	48578996	48600157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48579055_48590111_48590194_48596158
ENSMUSG00000007338.11_0	chr19	-	1747	4	FSM	ENSMUSG00000007338.11	ENSMUST00000007482.8	1764	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCCAGAAACTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6107804	6103657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6105013_6105105_6105231_6106958_6107110_6107688
ENSMUSG00000007379.16_0	chr3	+	4957	19	FSM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAAATTCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	103034881	103077042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103034967_103038668_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUSG00000007379.16_1	chr3	+	4867	18	ISM	ENSMUSG00000007379.16	ENSMUST00000172288.3	4979	19	3796	18	3796	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGCATTTTAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	103038667	103077036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_103039648_103040530_103040662_103041054_103041168_103044458_103044630_103048374_103048472_103053827_103053873_103056356_103056539_103059608_103059719_103060952_103061023_103061803_103061882_103063355_103063497_103064117_103064267_103064959_103065138_103068863_103068906_103070306_103070413_103072323_103072561_103073728_103073816_103075086
ENSMUSG00000007411.17_0	chr12	+	2865	17	FSM	ENSMUSG00000007411.17	ENST00000676938.1	2883	17	9	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATGACATTAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	111540938	111622151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_1	chr12	+	3134	16	FSM	ENSMUSG00000007411.17	ENST00000678619.1	3149	16	8	7	6	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGATTCACAAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	111540937	111622611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_20	chr12	+	3509	18	FSM	ENSMUSG00000007411.17	ENST00000676897.1	3526	18	11	6	-8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCAGTAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	111540942	111622640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111618391_111618419_111621703
ENSMUSG00000007411.17_41	chr12	+	3145	17	FSM	ENSMUSG00000007411.17	ENST00000677360.1	3165	17	12	8	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCACAAGATAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111540975	111622615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUSG00000007411.17_43	chr12	+	3065	16	FSM	ENSMUSG00000007411.17	ENST00000676645.1	3090	16	17	8	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCACAAGATAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111540980	111622615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUSG00000007411.17_60	chr12	+	3232	16	FSM	ENSMUSG00000007411.17	ENST00000678237.1	3253	16	13	8	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTCACAAGATAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	111540977	111622615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111559010_111559203_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613904_111614163_111618391_111618419_111619823_111619869_111621703
ENSMUSG00000007411.17_9	chr12	+	3448	17	FSM	ENSMUSG00000007411.17	ENST00000679330.1	3458	17	10	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAGTAGATTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	111540941	111622605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111541536_111559010_111559203_111570944_111570999_111581829_111581879_111584751_111584818_111589678_111589750_111590920_111590978_111593509_111593747_111593912_111594033_111594248_111594349_111594623_111594737_111595395_111595550_111600050_111600269_111606370_111606475_111613123_111613283_111613904_111614163_111621703
ENSMUSG00000007415.16_0	chr5	-	2530	5	FSM	ENSMUSG00000007415.16	ENSMUST00000007559.15	2545	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGGTTTATTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	3697925	3689966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3691581_3693557_3693742_3694880_3694941_3696783_3696910_3697379
ENSMUSG00000007458.15_0	chr6	+	2490	7	FSM	ENSMUSG00000007458.15	ENSMUST00000007602.15	2515	7	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAACACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	122285686	122294622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122286126_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007458.15_3	chr6	+	2509	8	FSM	ENSMUSG00000007458.15	ENSMUST00000112610.2	2539	8	13	17	13	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAACACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	122285691	122294622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122286126_122288562_122288587_122289192_122289373_122290217_122290385_122292015_122292126_122292262_122292394_122293008_122293136_122293286
ENSMUSG00000007476.19_0	chr2	+	4176	3	FSM	ENSMUSG00000007476.19	ENSMUST00000113654.8	4194	3	6	12	-1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATAACACAGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30127732	30153785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30127818_30145179_30147345_30151859
ENSMUSG00000007476.19_1	chr2	+	4288	4	FSM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	4	9	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTTGCCTTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	30127737	30153793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30127818_30130580_30130690_30145179_30147345_30151859
ENSMUSG00000007476.19_4	chr2	+	4209	3	ISM	ENSMUSG00000007476.19	ENSMUST00000095078.3	4301	4	2846	9	2846	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTTGCCTTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	30130579	30153793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30130690_30145179_30147345_30151859
ENSMUSG00000007564.16_0	chr17	+	2400	15	FSM	ENSMUSG00000007564.16	ENSMUST00000007708.14	2410	15	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTAGTAATCGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	21165582	21186178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21165846_21171604_21171696_21174876_21174978_21176049_21176283_21176966_21177115_21177218_21177375_21178981_21179097_21179201_21179273_21179650_21179786_21180727_21180902_21181214_21181276_21181846_21182002_21182835_21182979_21185500_21185593_21185716
ENSMUSG00000007570.17_0	chr17	+	2013	10	FSM	ENSMUSG00000007570.17	ENSMUST00000114803.9	2025	10	7	5	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCAGGCTTGGTGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28532499	28545541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28541619_28541746_28545125
ENSMUSG00000007570.17_1	chr17	+	1810	8	FSM	ENSMUSG00000007570.17	ENSMUST00000114801.9	1825	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCCATCCAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28532503	28545534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
ENSMUSG00000007570.17_5	chr17	+	1826	9	FSM	ENSMUSG00000007570.17	ENSMUST00000114804.11	1842	9	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCCATCCAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28532553	28545534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28532857_28534572_28535162_28535832_28535878_28536131_28536198_28536441_28536586_28537006_28537131_28537302_28537382_28539763_28539831_28545125
ENSMUSG00000007589.10_6	chr14	-	1973	9	FSM	ENSMUSG00000007589.10	ENSMUST00000227842.2	2001	9	25	3	25	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAACTCCAAAGGACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	55919177	55914077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55914739_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000007589.10_7	chr14	-	2942	9	FSM	ENSMUSG00000007589.10	ENSMUST00000007733.8	2956	9	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAGAAGTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55919263	55915322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55916867_55916970_55917063_55917322_55917388_55917471_55917914_55918067_55918165_55918251_55918360_55918456_55918547_55918681_55918769_55918846
ENSMUSG00000007591.16_0	chr14	+	461	2	FSM	ENSMUSG00000007591.16	ENST00000428351.2	477	2	8	8	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCCAAGGAAAAAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55887768	55889921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55888031_55889722
ENSMUSG00000007594.11_0	chr8	+	3626	5	FSM	ENSMUSG00000007594.11	ENSMUST00000007738.11	3648	5	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACCACTGCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70536119	70543503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70536214_70537069_70537191_70537431_70537795_70539457_70539782_70540779
ENSMUSG00000007603.10_0	chr17	+	2007	13	FSM	ENSMUSG00000007603.10	ENSMUST00000007747.10	2025	13	14	4	14	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTCTTTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57071791	57076837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57071942_57072524_57072793_57073781_57074289_57074632_57074675_57074782_57074936_57075033_57075151_57075347_57075414_57075517_57075629_57075805_57075903_57076049_57076126_57076249_57076439_57076533_57076663_57076735
ENSMUSG00000007610.16_0	chr8	+	2782	9	FSM	ENSMUSG00000007610.16	ENSMUST00000007754.13	2800	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATCTCCTTCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	71940757	71946037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71941485_71941714_71941963_71942071_71942159_71942978_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUSG00000007610.16_12	chr8	+	1266	6	FSM	ENSMUSG00000007610.16	ENST00000358792.11	1278	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGGTCCAGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71942075	71945402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71942159_71942978_71943182_71943538_71943854_71944068_71944235_71944720_71945000_71945182
ENSMUSG00000007610.16_17	chr8	+	1004	6	FSM	ENSMUSG00000007610.16	ENST00000600625.5	1023	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGGTCCAGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	71942996	71945402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71943182_71943538_71943612_71943709_71943854_71944068_71944235_71944783_71945000_71945182
ENSMUSG00000007613.16_0	chr4	+	5732	9	FSM	ENSMUSG00000007613.16	ENSMUST00000007757.15	5756	9	22	2	22	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCAACATTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47353243	47414929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_47353397_47383748_47383995_47393246_47393490_47396354_47396586_47402802_47402971_47403369_47403527_47405528_47405654_47406921_47407053_47410651
ENSMUSG00000007617.19_0	chr13	+	5311	10	FSM	ENSMUSG00000007617.19	ENST00000334082.11	5327	10	11	5	-1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGACTCTGAAATGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	93440608	93541839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_93441811_93478263_93478421_93483076_93483209_93485712_93485806_93492447_93492588_93524031_93524189_93528198_93528310_93529535_93529617_93538548_93541123_93541175
ENSMUSG00000007646.14_0	chr11	-	3928	9	FSM	ENSMUSG00000007646.14	ENSMUST00000067692.13	3944	9	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTAAAAATCATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	87295344	87267481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_87270314_87271657_87271719_87279444_87279506_87280659_87280727_87286091_87286224_87288449_87288584_87292215_87292383_87293423_87293683_87295129
ENSMUSG00000007653.13_0	chr11	+	1680	8	FSM	ENSMUSG00000007653.13	ENST00000517901.5	1700	8	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAGTGATTTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	42312036	42517925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_42312254_42313407_42313476_42378022_42378244_42420238_42420322_42482684_42482823_42484623_42484777_42488367_42488613_42517370
ENSMUSG00000007653.13_5	chr11	+	1329	7	FSM	ENSMUSG00000007653.13	ENST00000517547.5	1348	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACTAAGGTCCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	42312133	42517892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_42312254_42313407_42313476_42420238_42420322_42482684_42482823_42484623_42484777_42488367_42488613_42517370
ENSMUSG00000007655.17_0	chr6	+	2504	3	FSM	ENSMUSG00000007655.17	ENSMUST00000007799.13	2522	3	10	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTACGCAGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17306343	17341315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17306479_17307879_17308045_17339111
ENSMUSG00000007655.17_2	chr6	+	569	3	FSM	ENSMUSG00000007655.17	ENST00000393470.1	582	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGAAAGGTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17306393	17339463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17306479_17307912_17308045_17339111
ENSMUSG00000007655.17_4	chr6	+	2727	2	FSM	ENSMUSG00000007655.17	ENSMUST00000115453.2	2746	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGATTTTTCTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	17307650	17341444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17308045_17339111
ENSMUSG00000007656.14_0	chr9	+	3941	4	FSM	ENSMUSG00000007656.14	ENSMUST00000168166.8	3944	4	11	-8	11	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTTTAATATGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	74944906	74967584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74945002_74945188_74945244_74959514_74959638_74963916
ENSMUSG00000007656.14_2	chr9	+	424	4	FSM	ENSMUSG00000007656.14	ENSMUST00000170308.8	429	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCCTTTATTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	74944958	74964115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74945006_74945188_74945244_74959514_74959638_74963916
ENSMUSG00000007656.14_4	chr9	+	3948	3	FSM	ENSMUSG00000007656.14	ENSMUST00000007800.8	4046	3	87	11	-14	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTTTAATATGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	74945086	74967584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74945244_74959514_74959638_74963916
ENSMUSG00000007659.19_0	chr2	-	2536	3	FSM	ENSMUSG00000007659.19	ENST00000307677.5	2553	3	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	152672534	152622589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152624203_152671346_152672041_152672305
ENSMUSG00000007659.19_1	chr2	-	2407	3	FSM	ENSMUSG00000007659.19	ENSMUST00000007803.12	2417	3	8	2	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCACAGCCTTGGCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	152673640	152622589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152624203_152671346_152672023_152673522
ENSMUSG00000007659.19_10	chr2	-	2175	3	FSM	ENSMUSG00000007659.19	ENST00000422920.2	2187	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCTGAAAGTCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	152673195	152623404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152624203_152671535_152672023_152672305
ENSMUSG00000007659.19_4	chr2	-	2551	3	FSM	ENSMUSG00000007659.19	ENSMUST00000109820.5	2568	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGAACCACAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	152672575	152622597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152624203_152671346_152672023_152672305
ENSMUSG00000007659.19_6	chr2	-	2398	3	FSM	ENSMUSG00000007659.19	ENST00000420488.6	2414	3	7	9	-3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATAAATGGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	152673641	152622617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152624203_152671346_152672041_152673522
ENSMUSG00000007670.11_0	chr17	-	3960	18	FSM	ENSMUSG00000007670.11	ENSMUST00000007814.10	3978	18	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAAACCTCCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57338480	57328060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57329971_57330058_57330137_57330212_57330414_57330504_57330594_57330826_57330937_57331010_57331172_57331246_57331493_57331788_57331892_57331979_57332079_57332307_57332407_57332495_57332671_57332879_57332938_57333842_57333915_57334048_57334099_57334816_57334857_57334955_57334995_57336041_57336139_57338147
ENSMUSG00000007682.8_0	chr12	-	495	2	FSM	ENSMUSG00000007682.8	ENST00000557125.1	504	2	0	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTGAACTGAATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	90705058	90696124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_90696572_90705010
ENSMUSG00000007682.8_1	chr12	-	437	1	ISM	ENSMUSG00000007682.8	ENSMUST00000082432.6	5815	2	8651	4799	8497	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	143	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTGAACTGAATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	90696561	90696124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_90696100_90696600
ENSMUSG00000007721.7_0	chr8	-	1338	5	FSM	ENSMUSG00000007721.7	ENSMUST00000007865.7	1356	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGGCCCATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	71326568	71320877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71321290_71321380_71321496_71321576_71321752_71322548_71322719_71326102
ENSMUSG00000007739.11_0	chr11	+	2468	14	FSM	ENSMUSG00000007739.11	ENSMUST00000173867.8	2484	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGTGTGCCAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	22940528	22953774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22940881_22943266_22943320_22944297_22944388_22945929_22946039_22946314_22946458_22947032_22947155_22947602_22947736_22949032_22949173_22950857_22950955_22951361_22951473_22951559_22951691_22952166_22952402_22952816_22952931_22953136
ENSMUSG00000007777.10_0	chr11	-	799	2	FSM	ENSMUSG00000007777.10	ENSMUST00000007921.9	813	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCTTTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	51579472	51576218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51576920_51579374
ENSMUSG00000007777.10_1	chr11	-	704	1	NIC	ENSMUSG00000007777.10	novel	813	2	NA	NA	2558	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCTTTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	51576922	51576218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_51576200_51576900
ENSMUSG00000007783.11_1	chr7	-	2783	19	FSM	ENSMUSG00000007783.11	ENSMUST00000063761.8	2793	19	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCCACTGTGCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44624268	44608799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616329_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150_44623305_44624018
ENSMUSG00000007783.11_12	chr7	-	2269	18	FSM	ENSMUSG00000007783.11	ENST00000405931.6	2285	18	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGGAGAATTCGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	44623283	44609009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44609100_44609267_44609361_44609473_44609588_44610181_44610335_44610942_44611075_44611569_44611735_44612166_44612284_44613327_44613434_44614507_44614691_44614794_44614991_44616049_44616135_44616220_44616296_44616481_44616557_44619828_44619967_44620041_44620144_44620659_44620832_44622433_44622574_44623150
ENSMUSG00000007805.5_0	chr1	+	1317	2	FSM	ENSMUSG00000007805.5	ENSMUST00000007949.4	1329	2	6	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCCCGCGTGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	91729188	91775744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91729872_91775110
ENSMUSG00000007805.5_2	chr1	+	1249	2	FSM	ENSMUSG00000007805.5	ENST00000612363.2	1271	2	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAACAATAAAGAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91729232	91775723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91729888_91775129
ENSMUSG00000007812.17_0	chr5	+	1754	5	FSM	ENSMUSG00000007812.17	ENSMUST00000200039.5	1765	5	6	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTACAAAATGCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	145168530	145175127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145172546_145172674_145173859
ENSMUSG00000007812.17_1	chr5	+	4090	4	FSM	ENSMUSG00000007812.17	ENSMUST00000167316.8	4104	4	8	6	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCGTAGACTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	145168540	145184106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145168642_145170250_145170413_145179729_145179835_145180384
ENSMUSG00000007812.17_10	chr5	+	141	1	NIC	ENSMUSG00000007812.17	novel	1765	5	NA	NA	413	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTAAGGACCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	145172527	145172668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_145172500_145172700
ENSMUSG00000007812.17_2	chr5	+	1133	4	FSM	ENSMUSG00000007812.17	ENSMUST00000196069.5	1150	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTCACTTGTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	145168548	145174651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145173859
ENSMUSG00000007812.17_3	chr5	+	4146	5	FSM	ENSMUSG00000007812.17	ENSMUST00000199322.5	4157	5	6	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTCGTAGACTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	145168570	145184106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145168642_145170250_145170413_145172115_145172202_145179729_145179835_145180384
ENSMUSG00000007812.17_9	chr5	+	222	2	FSM	ENSMUSG00000007812.17	ENST00000449244.5	233	2	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTAAGGACCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	145172119	145172668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145172202_145172528
ENSMUSG00000007815.14_0	chr9	+	2184	6	FSM	ENSMUSG00000007815.14	ENSMUST00000007959.14	2197	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	8844	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTGTATTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108183337	108215130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108183753_108192506_108192582_108204782_108204941_108208069_108208191_108212249_108212381_108213846
ENSMUSG00000007817.16_0	chr14	+	7457	24	FSM	ENSMUSG00000007817.16	ENSMUST00000162645.8	7482	24	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGGACAAAAAATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	25459654	25667149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647140_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ENSMUSG00000007817.16_2	chr14	+	5380	24	FSM	ENSMUSG00000007817.16	ENSMUST00000007961.15	5397	24	0	17	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCCTAAAAAAAAAAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	25459690	25665126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_25459981_25503078_25503184_25537168_25537249_25572443_25572553_25576554_25576669_25581991_25582098_25636296_25636442_25643981_25644097_25645079_25645298_25646082_25646282_25647158_25647432_25650091_25650275_25650948_25651030_25651642_25651818_25652270_25652413_25653746_25653958_25654922_25655029_25655520_25655682_25656446_25656515_25656747_25656817_25657169_25657415_25658530_25658698_25661690_25661946_25663363
ENSMUSG00000007827.11_0	chr6	-	6911	34	FSM	ENSMUSG00000007827.11	ENSMUST00000112830.3	6930	34	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTTCATACATGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	118539177	118478277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118480118_118482686_118482733_118483336_118483566_118484598_118484814_118485450_118485742_118488526_118488657_118492741_118492855_118494856_118494951_118495301_118495373_118498801_118498955_118499899_118500857_118501905_118502044_118502693_118502878_118504616_118504831_118506394_118506537_118506803_118506838_118509162_118509331_118510275_118510428_118512039_118512105_118516646_118516726_118516807_118516837_118517411_118517511_118519850_118519945_118525274_118525337_118525790_118525921_118526346_118526499_118526598_118526660_118528929_118529003_118529706_118529741_118531164_118531227_118533156_118533264_118535898_118536073_118536231_118536347_118538773
ENSMUSG00000007833.16_1	chr7	-	3521	17	FSM	ENSMUSG00000007833.16	ENSMUST00000209963.2	3537	17	11	5	-5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGAGTTTTGGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44803986	44790333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44791527_44792203_44792327_44792536_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUSG00000007833.16_17	chr7	-	1619	11	FSM	ENSMUSG00000007833.16	ENST00000540132.5	1633	11	5	9	-5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACAGGTGAGACAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	44804002	44793943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796585_44796739_44796822_44797005_44797148_44797227_44803815
ENSMUSG00000007833.16_8	chr7	-	1950	14	FSM	ENSMUSG00000007833.16	ENST00000455361.6	1968	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCCCCTGCACTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	44803969	44792621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44792723_44793936_44794139_44794290_44794459_44794899_44795031_44795108_44795215_44795326_44795464_44795617_44795714_44796046_44796233_44796822_44797005_44797148_44797227_44797307_44797487_44798037_44798165_44799087_44799191_44803815
ENSMUSG00000007836.7_0	chr13	-	2654	1	FSM	ENSMUSG00000007836.7	ENSMUST00000007980.7	2678	1	16	8	16	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTTACATGATTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	58276354	58273700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58273700_58276400
ENSMUSG00000007837.12_0	chr7	-	1608	8	FSM	ENSMUSG00000007837.12	ENSMUST00000210690.2	1623	8	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAACTGAGCCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	44712097	44703018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44703622_44703942_44704072_44706166_44706309_44709395_44709436_44709628_44709811_44710164_44710317_44711011_44711076_44711801
ENSMUSG00000007850.17_10	chr11	+	2215	14	FSM	ENSMUSG00000007850.17	ENSMUST00000069304.14	2225	14	3	7	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50268548	50277347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50268630_50269117_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_2	chr11	+	2992	13	FSM	ENSMUSG00000007850.17	ENST00000356731.9	3015	13	19	4	19	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50268259	50277347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274567_50274657_50274748_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007850.17_28	chr11	+	2048	12	FSM	ENSMUSG00000007850.17	ENST00000510411.5	2062	12	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTACACTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50269143	50277347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50269255_50270294_50270451_50270647_50270792_50272285_50272425_50273363_50273543_50273626_50273699_50273754_50273889_50274005_50274142_50274506_50274597_50275470_50275564_50275967_50276018_50276603
ENSMUSG00000007867.10_0	chr12	+	782	9	FSM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	86129360	86209232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_86129415_86131867_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007867.10_3	chr12	+	722	8	ISM	ENSMUSG00000007867.10	ENSMUST00000222821.2	783	9	2513	1	2513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTTCTTCCATTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	86131873	86209232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_86131961_86158384_86158450_86185566_86185600_86186825_86186870_86207922_86207996_86208225_86208302_86208760_86208824_86208951
ENSMUSG00000007872.4_0	chr4	+	1262	3	FSM	ENSMUSG00000007872.4	ENSMUST00000008016.3	1278	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTGTATGACATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	135870817	135872697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135871490_135871604_135871688_135872190
ENSMUSG00000007877.3_1	chr11	+	566	3	FSM	ENSMUSG00000007877.3	ENST00000578283.1	579	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGATGCCTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98274677	98275508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98274783_98274977_98275035_98275104
ENSMUSG00000007880.17_0	chr4	-	8150	20	FSM	ENSMUSG00000007880.17	ENSMUST00000105897.10	8175	20	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133480899	133406320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413729_133413868_133413950_133414102_133414514_133414691_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ENSMUSG00000007880.17_1	chr4	-	8168	20	FSM	ENSMUSG00000007880.17	ENSMUST00000145664.9	8187	20	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTTGTGAAGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133480905	133406320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413714_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133479779
ENSMUSG00000007880.17_8	chr4	-	6424	20	FSM	ENSMUSG00000007880.17	ENST00000430799.7	6462	20	14	24	14	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGGTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133484059	133407277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133409367_133411745_133411877_133412184_133413077_133413539_133413637_133413729_133413868_133413950_133414102_133414514_133414688_133414848_133414982_133416364_133416573_133418380_133418591_133420109_133420220_133420315_133420462_133421068_133421382_133421973_133422142_133422882_133422973_133423226_133423468_133446847_133446965_133447860_133448311_133450149_133450363_133483705
ENSMUSG00000007888.16_0	chr8	+	1631	9	FSM	ENSMUSG00000007888.16	ENSMUST00000008032.14	1644	9	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGTGTGTTTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	70945816	70956727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956246_70956290_70956470
ENSMUSG00000007888.16_7	chr8	+	1263	8	FSM	ENSMUSG00000007888.16	ENST00000684169.1	1282	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTAAGGGGGTCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	70945928	70956285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70946051_70951246_70951529_70951742_70951873_70951979_70952150_70953533_70953692_70953759_70953929_70955954_70956143_70956241
ENSMUSG00000007891.17_13	chr7	-	1909	9	FSM	ENSMUSG00000007891.17	ENSMUST00000066401.7	1922	9	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141941581	141929653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931087_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007891.17_17	chr7	-	993	7	FSM	ENSMUSG00000007891.17	ENST00000236671.7	1012	7	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGTCGTACTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	141937266	141930325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000007891.17_18	chr7	-	1158	6	FSM	ENSMUSG00000007891.17	ENST00000438213.6	1174	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTGTCGTACTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	141937269	141930325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141930476_141930569_141930669_141930762_141931193_141934502_141934696_141936276_141936448_141937154
ENSMUSG00000007891.17_6	chr7	-	2111	9	FSM	ENSMUSG00000007891.17	ENSMUST00000151120.9	2127	9	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTATTGGTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141941765	141929653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141930476_141930569_141930669_141930762_141930908_141931069_141931193_141934502_141934730_141936328_141936448_141937154_141937279_141939195_141939356_141941473
ENSMUSG00000007892.9_0	chr9	-	482	3	FSM	ENSMUSG00000007892.9	ENSMUST00000008036.9	499	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16925	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTAGGTGGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	61821814	61820572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_61820804_61821169_61821245_61821638
ENSMUSG00000007950.10_1	chr8	-	1950	5	FSM	ENSMUSG00000007950.10	ENSMUST00000008094.10	1978	5	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAATCCAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	71916288	71909365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71910022_71910681_71910899_71911021_71911193_71913889_71914617_71916109
ENSMUSG00000007987.13_0	chr5	+	3051	5	FSM	ENSMUSG00000007987.13	ENSMUST00000200157.5	3071	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCACCTCTATCTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	136937016	136944251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542_136940746_136941678
ENSMUSG00000007987.13_4	chr5	+	661	4	FSM	ENSMUSG00000007987.13	ENSMUST00000200153.5	670	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTAGGTAAAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136937057	136940969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136937125_136939977_136940055_136940155_136940246_136940542
ENSMUSG00000007989.8_0	chr14	-	12712	7	FSM	ENSMUSG00000007989.8	ENSMUST00000131309.3	12734	7	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTCTGTCATTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	65499890	65429897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65440382_65447140_65447375_65449523_65449673_65472362_65473381_65477166_65477364_65490392_65490913_65499780
ENSMUSG00000008035.13_0	chrX	+	2018	2	FSM	ENSMUSG00000008035.13	ENSMUST00000115524.8	2022	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10583632	10585929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_10583944_10584222
ENSMUSG00000008035.13_3	chrX	+	2011	2	FSM	ENSMUSG00000008035.13	ENSMUST00000008179.7	2019	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAACTGGACAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10583636	10585929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_10583944_10584225
ENSMUSG00000008035.13_4	chrX	+	1776	2	FSM	ENSMUSG00000008035.13	ENST00000378474.3	1792	2	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAAACGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	10583851	10585905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_10583948_10584225
ENSMUSG00000008036.12_0	chr7	+	823	5	FSM	ENSMUSG00000008036.12	ENSMUST00000086112.8	836	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1878	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTCTGAGCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	16472347	16483219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16472464_16477143_16477294_16481185_16481300_16482613_16482674_16482836
ENSMUSG00000008090.15_0	chr5	+	1790	7	FSM	ENSMUSG00000008090.15	ENST00000510644.6	1807	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGCTAAATACAGCGAATC	NA	NA	NA	NA	NA	NA	NA	NA	108842106	108854105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108842399_108842903_108842985_108851151_108851425_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUSG00000008090.15_5	chr5	+	2308	6	FSM	ENSMUSG00000008090.15	ENSMUST00000112560.8	2318	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAAGAAATTGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108842142	108854789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108842399_108842760_108842985_108852532_108852614_108852720_108853006_108853084_108853439_108853681
ENSMUSG00000008129.15_0	chr8	+	2358	9	FSM	ENSMUSG00000008129.15	ENSMUST00000118856.8	2366	9	0	8	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGAGCCTCTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	84874787	84899211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84875028_84875466_84875515_84886073_84886237_84887841_84887921_84888928_84889034_84893209_84894320_84896983_84897082_84898446_84898540_84898789
ENSMUSG00000008136.15_0	chr1	-	1548	6	FSM	ENSMUSG00000008136.15	ENSMUST00000008280.14	1563	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACAGTGTGTGGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	43203110	43162237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43162826_43167403_43167591_43170811_43170982_43180857_43181033_43192235_43192415_43202861
ENSMUSG00000008140.19_0	chr7	-	1850	7	FSM	ENSMUSG00000008140.19	ENSMUST00000239015.2	1855	7	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTTCTTGGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	44145933	44139362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44140395_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUSG00000008140.19_2	chr7	-	1645	8	FSM	ENSMUSG00000008140.19	ENSMUST00000118515.9	1662	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCACTTCCTGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44145819	44139540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44140395_44140586_44140674_44141378_44141473_44141567_44141750_44141977_44142083_44142613_44142724_44144231_44144305_44145679
ENSMUSG00000008167.15_0	chr8	+	1893	10	FSM	ENSMUSG00000008167.15	ENSMUST00000095220.4	1907	10	11	3	11	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGAGTGTGAGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85786694	85793747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85787166_85788574_85788715_85788800_85788930_85791012_85791126_85791209_85791302_85792449_85792599_85792684_85792799_85792901_85792992_85793073_85793140_85793218
ENSMUSG00000008193.14_0	chr7	-	502	3	FSM	ENSMUSG00000008193.14	ENST00000439922.6	505	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCCGGCATGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44179351	44177401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44177682_44178260_44178412_44179280
ENSMUSG00000008193.14_1	chr7	-	432	2	ISM	ENSMUSG00000008193.14	ENST00000439922.6	505	3	942	0	942	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCCGGCATGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44178412	44177401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44177682_44178260
ENSMUSG00000008193.14_2	chr7	-	502	4	FSM	ENSMUSG00000008193.14	ENST00000597855.5	507	4	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGTGCCGGCGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44179352	44177597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44177682_44178260_44178377_44178802_44179033_44179280
ENSMUSG00000008193.14_3	chr7	-	428	3	ISM	ENSMUSG00000008193.14	ENST00000597855.5	507	4	324	3	324	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGGTGCCGGCGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44179030	44177597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44177682_44178260_44178377_44178802
ENSMUSG00000008200.16_0	chr2	+	4677	17	FSM	ENSMUSG00000008200.16	ENSMUST00000238890.2	4691	17	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTTGTCTTGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	90575724	90611362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90576171_90577039_90577133_90581411_90581549_90581775_90581963_90583162_90583311_90583413_90583535_90587679_90588031_90588637_90588849_90593764_90593890_90596173_90596279_90597751_90597886_90598859_90599045_90606248_90606566_90606674_90606820_90607908_90608265_90609542_90609701_90609904
ENSMUSG00000008206.17_0	chr8	+	9463	11	FSM	ENSMUSG00000008206.17	ENSMUST00000008350.16	9475	11	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTAAATAAAGTTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	4543198	4581668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4543591_4565554_4565729_4566872_4566991_4568239_4568359_4568602_4568661_4569462_4569514_4570215_4570309_4570553_4570683_4571173_4571281_4573353_4573511_4573603
ENSMUSG00000008226.15_0	chr2	+	3288	8	FSM	ENSMUSG00000008226.15	ENSMUST00000090811.11	3309	8	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAATTGATTCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	73142954	73168151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646_73149844_73152328_73152539_73160106_73160270_73161326_73161502_73166054
ENSMUSG00000008226.15_3	chr2	+	1890	4	FSM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTACACTGATTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	73142997	73151133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_73143058_73145775_73145937_73148589_73148772_73149646
ENSMUSG00000008226.15_5	chr2	+	1827	3	ISM	ENSMUSG00000008226.15	ENSMUST00000112050.2	1897	4	2784	4	2784	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACACTGATTACTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73145781	73151136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_73145937_73148589_73148772_73149646
ENSMUSG00000008301.12_0	chr18	+	1374	5	FSM	ENSMUSG00000008301.12	ENSMUST00000130163.8	1386	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGTTACCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	56695520	56720255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_56695796_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008301.12_1	chr18	+	1931	5	FSM	ENSMUSG00000008301.12	ENSMUST00000008445.7	1942	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGATGTGTCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	56705902	56720782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_56706208_56708533_56709121_56713251_56713373_56717362_56717447_56719948
ENSMUSG00000008305.19_0	chr4	-	4334	20	FSM	ENSMUSG00000008305.19	ENSMUST00000074216.14	4369	20	29	6	-28	-6	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATGTTTTGTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	72119127	72035384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72071117_72071135_72076449_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008305.19_7	chr4	-	2951	19	FSM	ENSMUSG00000008305.19	ENST00000376499.8	2967	19	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAAGTGGTCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	72118410	72036049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_72036629_72036727_72036805_72038376_72038528_72040580_72040729_72043008_72043257_72044424_72044675_72055318_72055396_72056728_72056926_72057925_72058071_72059397_72059551_72060063_72060118_72063546_72063658_72076433_72076655_72087358_72087434_72088944_72089008_72116009_72116055_72116154_72116219_72117533_72117635_72118218
ENSMUSG00000008318.11_0	chr7	-	2834	11	FSM	ENSMUSG00000008318.11	ENSMUST00000008462.11	2851	11	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAATTATGAACGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	100512646	100495063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100496485_100496602_100496802_100497225_100497481_100497628_100497711_100498005_100498087_100499271_100499530_100500299_100500380_100500560_100500728_100500846_100500922_100502252_100502323_100512500
ENSMUSG00000008333.13_0	chr2	+	2053	7	FSM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAAACAACAAAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	142904958	142914765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_142905019_142906461_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008333.13_1	chr2	+	1989	6	ISM	ENSMUSG00000008333.13	ENSMUST00000008477.13	2061	7	1507	8	1507	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAAACAACAAAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	142906465	142914765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_142906551_142907095_142907269_142910180_142910322_142911293_142911345_142912807_142912897_142913315
ENSMUSG00000008348.10_0	chr5	-	2597	2	FSM	ENSMUSG00000008348.10	ENSMUST00000136312.2	2618	2	9	12	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125467069	125463040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125465329_125466760
ENSMUSG00000008348.10_2	chr5	-	2372	2	NNC	ENSMUSG00000008348.10	novel	2618	2	NA	NA	10	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATCTTCATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125467068	125463040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_-_125465105_125466760
ENSMUSG00000008348.10_98	chr5	-	2566	2	FSM	ENSMUSG00000008348.10	ENSMUST00000156249.2	2581	2	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAAAAAATCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	125467256	125463045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125465329_125466973
ENSMUSG00000008373.17_0	chr7	+	3109	14	FSM	ENSMUSG00000008373.17	ENSMUST00000179769.8	3125	14	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAGCATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	3632983	3645468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008373.17_1	chr7	+	3122	14	FSM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	5	17	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAGCATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	3632988	3645468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3633056_3633556_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008373.17_6	chr7	+	3056	13	ISM	ENSMUSG00000008373.17	ENSMUST00000008517.13	3144	14	572	17	0	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAGCATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	3633555	3645468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641629_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008373.17_8	chr7	+	1789	13	FSM	ENSMUSG00000008373.17	ENSMUST00000108636.2	1798	13	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGTGTGAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	3633562	3644226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3633742_3633843_3633905_3635666_3635751_3636302_3636401_3637122_3637230_3637691_3637862_3639199_3639358_3639660_3639751_3641647_3641758_3641856_3641930_3642574_3642704_3642787_3642887_3643795
ENSMUSG00000008384.9_0	chr7	+	1217	2	FSM	ENSMUSG00000008384.9	ENSMUST00000008528.8	1233	2	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCAAGTGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	27186341	27189732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27186504_27188677
ENSMUSG00000008384.9_1	chr7	+	988	2	FSM	ENSMUSG00000008384.9	ENST00000357949.5	1001	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGAAGGAGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	27186390	27189554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27186502_27188677
ENSMUSG00000008393.10_0	chr16	-	2851	4	FSM	ENSMUSG00000008393.10	ENSMUST00000008537.10	2858	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGAGGTGACTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	8490019	8476450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8489976
ENSMUSG00000008393.10_1	chr16	-	2798	3	ISM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	2143	-2085	2143	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGAGGTGACTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	8482276	8476450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_8478968_8481450_8481574_8482118
ENSMUSG00000008393.10_6	chr16	-	860	4	FSM	ENSMUSG00000008393.10	ENST00000610831.4	874	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCGAGGGTGCAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	8484410	8478540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_8478968_8481450_8481574_8482118_8482287_8484268
ENSMUSG00000008398.17_0	chr10	-	4194	5	FSM	ENSMUSG00000008398.17	ENSMUST00000008542.12	4212	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGAGGGTGTTTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	93146986	93083282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93085971_93090550_93090674_93100741_93101543_93120630_93120840_93146613
ENSMUSG00000008429.9_0	chr9	-	2762	8	FSM	ENSMUSG00000008429.9	ENSMUST00000008573.9	2781	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATGATAAACAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	25063105	25019435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_25020302_25020735_25020851_25021706_25022031_25025116_25025240_25036167_25036320_25041831_25041946_25044490_25044569_25062115
ENSMUSG00000008435.16_0	chr7	-	3026	7	FSM	ENSMUSG00000008435.16	ENSMUST00000008579.14	3034	7	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTTGTCATTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4448641	4428666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4430802_4433392_4433495_4434420_4434634_4437992_4438098_4445592_4445749_4447201_4447321_4448445
ENSMUSG00000008450.9_0	chr8	+	923	5	FSM	ENSMUSG00000008450.9	ENSMUST00000008594.9	948	5	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATTTTCTTAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	106587225	106605951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106587338_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008450.9_1	chr8	+	1127	5	FSM	ENSMUSG00000008450.9	ENST00000568396.2	1145	5	7	11	7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106587596	106605965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106587899_106602165_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008450.9_3	chr8	+	814	4	ISM	ENSMUSG00000008450.9	ENST00000568396.2	1145	5	14587	11	-24	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTTAAATTGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	106602176	106605965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_106602291_106602985_106603058_106603141_106603241_106605436
ENSMUSG00000008450.9_5	chr8	+	338	4	FSM	ENSMUSG00000008450.9	ENST00000604593.1	349	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTCGGCTGACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106602206	106605536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106602291_106602985_106603043_106603143_106603241_106605436
ENSMUSG00000008475.14_0	chr1	+	1897	4	FSM	ENSMUSG00000008475.14	ENSMUST00000077755.11	1914	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAATACTTGTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	152642302	152651341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_152642619_152644611_152644685_152647114_152647292_152650010
ENSMUSG00000008475.14_1	chr1	+	1897	4	NNC	ENSMUSG00000008475.14	novel	1914	4	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAATACTTGTAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	152642301	152651341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_152642620_152644613_152644685_152647114_152647292_152650010
ENSMUSG00000008482.10_0	chr17	-	1175	4	FSM	ENSMUSG00000008482.10	ENSMUST00000008626.10	1195	4	0	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATAGAAGTTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24937037	24934832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24935684_24936039_24936137_24936436_24936583_24936956
ENSMUSG00000008482.10_1	chr17	-	1095	3	ISM	ENSMUSG00000008482.10	ENSMUST00000008626.10	1195	4	454	20	403	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAATAGAAGTTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	24936583	24934832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24935684_24936039_24936137_24936436
ENSMUSG00000008489.19_0	chr4	-	3718	7	FSM	ENSMUSG00000008489.19	ENST00000544538.5	3735	7	12	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAAAGAACTGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	91260293	91139010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_91141805_91142377_91142417_91148997_91149224_91152228_91152383_91169450_91169555_91196847_91197092_91260136
ENSMUSG00000008540.12_0	chr6	+	1146	4	FSM	ENSMUSG00000008540.12	ENSMUST00000008684.11	1167	4	5	16	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTACAAATGAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	138117318	138133737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_138117605_138124656_138124814_138127765_138127861_138133129
ENSMUSG00000008540.12_1	chr6	+	729	3	FSM	ENSMUSG00000008540.12	ENSMUST00000140932.2	742	3	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAATTAAAAACATTACAA	NA	NA	NA	NA	NA	NA	NA	NA	138117568	138133727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_138117605_138127765_138127861_138133129
ENSMUSG00000008575.18_0	chr4	-	8761	12	FSM	ENSMUSG00000008575.18	ENSMUST00000050872.15	8770	12	4	5	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGACTCTGGCCTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	82423541	82208414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ENSMUSG00000008575.18_1	chr4	-	9102	11	FSM	ENSMUSG00000008575.18	ENSMUST00000107245.9	9116	11	4	10	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACAGACTCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	82424003	82208419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82215049_82238710_82238794_82241808_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ENSMUSG00000008575.18_2	chr4	-	8412	9	FSM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTACAGACTCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	82423535	82208419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82422967
ENSMUSG00000008575.18_3	chr4	-	2306	12	FSM	ENSMUSG00000008575.18	ENST00000646622.1	2308	12	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAACCCAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82430851	82214345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82430801
ENSMUSG00000008575.18_4	chr4	-	2251	11	ISM	ENSMUSG00000008575.18	ENSMUST00000107248.8	3294	12	6943	61	6544	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAACCCAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82417001	82214345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_82215049_82228539_82228629_82238710_82238794_82241781_82241948_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ENSMUSG00000008575.18_5	chr4	-	2008	9	FSM	ENSMUSG00000008575.18	ENST00000606230.2	2016	9	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAACCCAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82430891	82214345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474_82417007_82430801
ENSMUSG00000008575.18_6	chr4	-	1919	8	ISM	ENSMUSG00000008575.18	ENSMUST00000064770.9	8429	9	6538	5933	6538	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAACCCAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	82417007	82214345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_82215049_82245965_82246151_82248528_82248664_82268625_82268745_82271759_82271881_82277968_82278038_82301844_82301899_82416474
ENSMUSG00000008604.12_0	chr3	+	3316	11	FSM	ENSMUSG00000008604.12	ENSMUST00000008748.8	3330	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATATTGGTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	88461072	88477026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88461220_88462644_88462797_88463096_88463300_88463963_88464227_88466924_88467084_88470414_88470641_88471676_88471817_88472313_88472398_88472519_88472636_88472997_88473185_88475387
ENSMUSG00000008658.17_0	chr16	+	1563	13	FSM	ENSMUSG00000008658.17	ENST00000436368.6	1582	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAACTCAAAGAAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	6887606	7227808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_6887950_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7187664_7187708_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_11	chr16	+	4008	14	FSM	ENSMUSG00000008658.17	ENST00000683326.1	4029	14	9	12	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAAAACTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7035513	7230288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7035694_7042174_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_19	chr16	+	3690	12	FSM	ENSMUSG00000008658.17	ENST00000676218.1	3704	12	9	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAAAACTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7042181	7230288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7227632
ENSMUSG00000008658.17_23	chr16	+	3845	13	FSM	ENSMUSG00000008658.17	ENST00000675459.1	3870	13	10	15	10	14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATAAAAGCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	7042183	7230314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7227554
ENSMUSG00000008658.17_26	chr16	+	1248	12	FSM	ENSMUSG00000008658.17	ENST00000422070.8	1257	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTTTTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7042182	7226498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7225827_7225904_7226283
ENSMUSG00000008658.17_30	chr16	+	1064	11	FSM	ENSMUSG00000008658.17	ENST00000535565.6	1073	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTTGTTTTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7042182	7226498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7042415_7103341_7103396_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283
ENSMUSG00000008658.17_34	chr16	+	3160	14	FSM	ENSMUSG00000008658.17	ENST00000547372.5	3168	14	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTACCCACTAGTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	7042180	7228421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_7042415_7094888_7095033_7103341_7103396_7110048_7110142_7111933_7111995_7124271_7124326_7148225_7148307_7170795_7170929_7181728_7181769_7193768_7193834_7209851_7209905_7225827_7225904_7226283_7226517_7226582
ENSMUSG00000008668.16_0	chr17	-	551	5	FSM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGACCTCCGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34174650	34170980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051_34174151_34174591
ENSMUSG00000008668.16_1	chr17	-	486	4	ISM	ENSMUSG00000008668.16	ENSMUST00000008812.9	560	5	507	8	493	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGACCTCCGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34174144	34170980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34171093_34171194_34171287_34171376_34171566_34174051
ENSMUSG00000008682.14_0	chrX	+	798	7	FSM	ENSMUSG00000008682.14	ENSMUST00000008826.14	799	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGTTTCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	73314417	73316740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73314481_73314584_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUSG00000008682.14_7	chrX	+	812	6	FSM	ENSMUSG00000008682.14	ENSMUST00000074085.12	855	6	42	1	42	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTTGTTTCTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	73314507	73316740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73314631_73315265_73315325_73315405_73315514_73315784_73315924_73316277_73316441_73316520
ENSMUSG00000008683.17_0	chr7	-	5173	5	FSM	ENSMUSG00000008683.17	ENSMUST00000131374.8	5179	5	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCTTGTCTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	117715411	117703600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117715358
ENSMUSG00000008683.17_1	chr7	-	5112	4	FSM	ENSMUSG00000008683.17	ENSMUST00000172457.8	5130	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTCTTGTCTGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	117714461	117703600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331
ENSMUSG00000008683.17_5	chr7	-	625	5	FSM	ENSMUSG00000008683.17	ENSMUST00000106588.8	640	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCTCAGGGTCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	117714891	117708292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117708417_117709155_117709242_117714007_117714088_117714331_117714470_117714694
ENSMUSG00000008690.16_0	chr15	+	3210	20	FSM	ENSMUSG00000008690.16	ENSMUST00000036987.12	3223	20	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGAGGCTGTTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	89239928	89257023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89240054_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_11	chr15	+	3286	20	FSM	ENSMUSG00000008690.16	ENSMUST00000088717.7	3302	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGAGGCTGTTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	89239948	89257023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254803_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008690.16_7	chr15	+	3284	20	FSM	ENSMUSG00000008690.16	ENSMUST00000074552.12	3299	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGAGGCTGTTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	89239947	89257023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89240147_89244558_89244661_89247633_89247690_89247807_89247893_89247968_89248038_89248124_89248205_89248290_89248446_89248815_89248900_89249436_89249535_89253586_89253659_89253818_89253886_89254010_89254119_89254227_89254282_89254440_89254512_89254597_89254692_89254806_89254879_89254955_89255012_89255094_89255197_89255296_89255447_89255513
ENSMUSG00000008730.18_0	chr3	-	7920	16	FSM	ENSMUSG00000008730.18	ENSMUST00000118317.8	7939	16	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTGGTTTCAATTC	NA	NA	NA	NA	NA	NA	NA	NA	103698861	103647131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103651753_103652575_103652707_103654110_103654353_103656594_103656802_103657518_103657702_103658091_103658235_103660695_103660831_103661516_103661639_103665850_103666077_103667810_103667974_103668802_103668988_103670988_103671076_103671777_103671898_103676713_103676838_103684537_103685616_103698708
ENSMUSG00000008734.10_0	chr7	-	4501	4	FSM	ENSMUSG00000008734.10	ENSMUST00000008878.10	4518	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTACCTAAGATGCGT	NA	NA	NA	NA	NA	NA	NA	NA	118594425	118571277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118574427_118575735_118575894_118582837_118583869_118594262
ENSMUSG00000008763.17_0	chr3	-	7955	13	FSM	ENSMUSG00000008763.17	ENSMUST00000008907.14	7969	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAAAGTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	100592809	100469527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_100475059_100485791_100485908_100489300_100489474_100495033_100495254_100499148_100499265_100524278_100524373_100527344_100527469_100539819_100539915_100551856_100551938_100554307_100554427_100559854_100559952_100563334_100563591_100591876
ENSMUSG00000008822.16_0	chr12	-	632	3	FSM	ENSMUSG00000008822.16	ENSMUST00000008966.13	648	3	14	2	-3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTGCTTCCCCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	85327195	85319173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85319602_85326764_85326857_85327083
ENSMUSG00000008822.16_3	chr12	-	550	2	FSM	ENSMUSG00000008822.16	ENST00000357971.7	567	2	9	8	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCTTATGCTTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	85326848	85319186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85319640_85326751
ENSMUSG00000008822.16_4	chr12	-	453	1	NIC	ENSMUSG00000008822.16	novel	648	3	NA	NA	7218	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCTTATGCTTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	85319639	85319186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_-_85319200_85319600
ENSMUSG00000008845.10_0	chr6	+	3135	12	FSM	ENSMUSG00000008845.10	ENST00000432237.3	3153	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTCGGGTCAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124283980	124304936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856
ENSMUSG00000008845.10_3	chr6	+	3276	13	FSM	ENSMUSG00000008845.10	ENST00000359156.8	3291	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTGAGTGAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	124283979	124306050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124284281_124285902_124286227_124288345_124288667_124289379_124289701_124294260_124294576_124294669_124294985_124295612_124295709_124295800_124296116_124297313_124297638_124302219_124302536_124303459_124303568_124304856_124304947_124305920
ENSMUSG00000008855.18_0	chr11	-	4848	25	FSM	ENSMUSG00000008855.18	ENSMUST00000107151.9	4852	25	3	1	3	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTTTCTGGGAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	102120989	102085258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ENSMUSG00000008855.18_3	chr11	-	4242	29	FSM	ENSMUSG00000008855.18	ENSMUST00000008999.12	4269	29	18	9	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAACAACGTGTGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	102120932	102086578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109608_102109970_102110108_102112593_102112678_102115559_102115782_102120830
ENSMUSG00000008855.18_5	chr11	-	3765	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107152.9	3788	27	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTCACACATTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	102120983	102086590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102086695_102086777_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109317_102115559_102115782_102120830
ENSMUSG00000008855.18_8	chr11	-	3714	27	FSM	ENSMUSG00000008855.18	ENSMUST00000107150.8	3759	27	38	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACATTCAACAACGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	102120924	102086583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102086695_102086773_102086944_102087063_102087149_102087364_102087499_102087884_102088004_102088164_102088263_102088491_102088612_102089622_102089711_102089830_102089887_102090191_102090300_102090461_102090512_102090794_102090916_102091225_102091360_102092058_102092231_102092878_102093161_102093369_102093582_102095256_102095480_102095657_102095790_102096109_102096223_102096310_102096458_102096615_102096747_102097247_102097363_102097455_102097601_102097732_102097993_102109241_102109314_102115559_102115782_102120830
ENSMUSG00000008859.9_0	chr13	-	2667	5	FSM	ENSMUSG00000008859.9	ENSMUST00000009003.9	2688	5	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTCTGTGGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	18118812	18055164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_18057087_18063091_18063267_18067706_18067916_18071537_18071688_18118601
ENSMUSG00000008892.13_0	chr8	-	1408	9	NNC	ENSMUSG00000008892.13	novel	1423	9	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACTTCTTAGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	23083818	23067095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077564_23077619_23078741_23078811_23083699
ENSMUSG00000008892.13_2	chr8	-	1344	9	FSM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	23083771	23067108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741_23078811_23083699
ENSMUSG00000008892.13_7	chr8	-	1272	8	ISM	ENSMUSG00000008892.13	ENSMUST00000009036.11	1354	9	4964	7	4964	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAATTGTTCATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	23078810	23067108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_23067619_23068058_23068117_23069007_23069159_23070355_23070584_23072098_23072152_23073599_23073753_23077568_23077619_23078741
ENSMUSG00000008932.11_0	chr4	+	1508	10	FSM	ENSMUSG00000008932.11	ENST00000611397.5	1519	10	9	2	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGCCAAGCCAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	107825760	107869660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107825908_107834800_107834881_107859373_107859417_107861466_107861687_107864686_107864787_107865337_107865572_107866875_107867071_107867566_107867702_107868089_107868193_107869409
ENSMUSG00000008958.15_0	chr3	+	1445	6	FSM	ENSMUSG00000008958.15	ENSMUST00000009102.9	1456	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	95018343	95030362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95018526_95025535_95025689_95025959_95026075_95026441_95026619_95028572_95028718_95029689
ENSMUSG00000008976.17_0	chr16	+	2163	10	FSM	ENSMUSG00000008976.17	ENSMUST00000114184.8	2202	10	31	8	31	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCCAAAATGATATC	NA	NA	NA	NA	NA	NA	NA	NA	84631843	84658195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_84631912_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUSG00000008976.17_2	chr16	+	4971	10	FSM	ENSMUSG00000008976.17	ENSMUST00000009120.8	4987	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGAAAGTTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84632018	84660658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_84632432_84635968_84636072_84638216_84638362_84641169_84641255_84643011_84643258_84649347_84649543_84653349_84653404_84653921_84654063_84654267_84654461_84657262
ENSMUSG00000008999.8_0	chr2	-	3666	7	FSM	ENSMUSG00000008999.8	ENSMUST00000009143.8	3670	7	1	3	1	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTGTGTATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	172782113	172709807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172721118_172721317_172735240_172735390_172758259_172758453_172781447
ENSMUSG00000008999.8_1	chr2	-	1316	6	FSM	ENSMUSG00000008999.8	ENST00000395864.7	1326	6	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGACCTTTGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	172782074	172711920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_172712080_172714664_172714776_172717007_172717085_172735240_172735390_172758259_172758453_172781447
ENSMUSG00000009013.6_0	chr5	-	2018	3	FSM	ENSMUSG00000009013.6	ENSMUST00000009157.4	2030	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCTGGCTCAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	115439048	115435170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115436893_115438571_115438710_115438890
ENSMUSG00000009030.15_0	chr2	-	2843	4	FSM	ENSMUSG00000009030.15	ENSMUST00000009174.15	2858	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGCCCCTGTATATTAG	NA	NA	NA	NA	NA	NA	NA	NA	37249335	37240091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37249154
ENSMUSG00000009030.15_1	chr2	-	3035	4	FSM	ENSMUSG00000009030.15	ENSMUST00000112940.8	3056	4	4	17	4	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAATTAAGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	37249261	37240616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37242395_37245647_37245830_37247215_37247393_37248363
ENSMUSG00000009035.16_0	chr15	-	3609	9	FSM	ENSMUSG00000009035.16	ENSMUST00000074991.10	3627	9	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTTCTGCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79287758	79244890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009035.16_4	chr15	-	3303	9	FSM	ENSMUSG00000009035.16	ENSMUST00000178522.3	3314	9	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTCTTCTGCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	79287114	79244890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79247086_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287046
ENSMUSG00000009035.16_9	chr15	-	3305	10	FSM	ENSMUSG00000009035.16	ENSMUST00000228002.2	3315	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGATAATATAGATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79287456	79244913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79247086_79247857_79247879_79249484_79249680_79249986_79250157_79250786_79250879_79253869_79253946_79254097_79254189_79261246_79261413_79262663_79262914_79287384
ENSMUSG00000009073.17_0	chr11	-	4707	16	FSM	ENSMUSG00000009073.17	ENSMUST00000109910.9	4720	16	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCTTTCGTCGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4799529	4715850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4718274_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4770367_4770494_4798871
ENSMUSG00000009073.17_12	chr11	-	1708	16	FSM	ENSMUSG00000009073.17	ENST00000361676.8	1719	16	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGGCCACCTCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4798977	4718216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4768504_4768628_4798871
ENSMUSG00000009073.17_20	chr11	-	1733	14	FSM	ENSMUSG00000009073.17	ENST00000334961.11	1751	14	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGTTATTCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4799185	4730580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4798871
ENSMUSG00000009073.17_5	chr11	-	2114	16	FSM	ENSMUSG00000009073.17	ENST00000361452.8	2122	16	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGACACCAACAGGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	4799350	4718186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4718274_4730577_4730623_4732186_4732353_4734435_4734564_4737443_4737550_4739664_4739883_4741090_4741214_4744411_4744526_4744842_4744918_4749860_4749996_4753677_4753754_4756253_4756337_4758256_4758326_4766081_4766166_4770367_4770494_4798871
ENSMUSG00000009075.3_0	chr11	-	2619	5	FSM	ENSMUSG00000009075.3	ENSMUST00000009219.3	2628	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCGAAATGTCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4696778	4686900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4688949_4689123_4689278_4689553_4689667_4690368_4690513_4696618
ENSMUSG00000009076.11_0	chr11	+	791	6	FSM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4654677	4687668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4654722_4672357_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009076.11_2	chr11	+	743	5	ISM	ENSMUSG00000009076.11	ENSMUST00000009220.5	792	6	17684	1	17684	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGGCCTGTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4672361	4687668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_4672512_4678584_4678648_4680186_4680268_4682066_4682179_4687331
ENSMUSG00000009079.17_0	chr11	-	2568	17	FSM	ENSMUSG00000009079.17	ENSMUST00000079949.13	2588	17	11	9	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5049255	5019697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_11	chr11	-	2399	17	FSM	ENSMUSG00000009079.17	ENST00000397938.7	2411	17	6	6	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTGTCATCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5049084	5019698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029523_5032252_5032434_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_13	chr11	-	2234	15	FSM	ENSMUSG00000009079.17	ENST00000629659.2	2251	15	12	5	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGTCATCCTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	5049134	5019697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041986_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009079.17_9	chr11	-	2344	17	FSM	ENSMUSG00000009079.17	ENST00000332050.10	2359	17	9	6	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAACTGTCATCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5049137	5019698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5020104_5020227_5020481_5020625_5020724_5020995_5021159_5021519_5021643_5022811_5022942_5028472_5028592_5028919_5028953_5029484_5029520_5031991_5032068_5033359_5033572_5035895_5036064_5037959_5038147_5041858_5041983_5043680_5043733_5043868_5043906_5049008
ENSMUSG00000009090.18_0	chr11	+	3923	21	FSM	ENSMUSG00000009090.18	ENSMUST00000109897.8	3942	21	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGTAAGTTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4936833	4992720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968096_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009090.18_24	chr11	+	3724	21	FSM	ENSMUSG00000009090.18	ENSMUST00000101613.3	3735	21	4	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTAAGTTCCTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	4959533	4992722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968096_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983241_4983263_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009090.18_27	chr11	+	2824	20	FSM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTCATGGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4959534	4991823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009090.18_3	chr11	+	4070	21	FSM	ENSMUSG00000009090.18	ENSMUST00000009234.16	4085	21	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTCTGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	4936833	4992786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4937052_4959529_4959593_4962881_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987631_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009090.18_55	chr11	+	2762	19	ISM	ENSMUSG00000009090.18	ENST00000317368.11	2831	20	3353	5	3353	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTCATGGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4962885	4991823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_4962988_4965605_4965742_4966605_4966852_4968015_4968207_4969280_4969503_4973096_4973218_4974371_4974468_4975593_4975710_4976244_4976411_4980961_4981061_4981629_4981890_4982417_4982620_4983686_4983843_4987691_4987778_4989124_4989255_4989518_4989604_4990093_4990181_4990266_4990422_4991717
ENSMUSG00000009097.11_0	chr16	-	2498	7	FSM	ENSMUSG00000009097.11	ENSMUST00000232335.2	2511	7	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGGCCTTCTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	18405707	18399729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285
ENSMUSG00000009097.11_3	chr16	-	1858	9	FSM	ENSMUSG00000009097.11	ENSMUST00000009241.7	1858	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTATTCTTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	18409421	18400453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18401207_18401473_18401575_18401656_18401725_18402168_18402325_18402833_18403006_18403784_18403887_18405285_18405629_18406736_18406857_18409378
ENSMUSG00000009112.5_0	chr6	+	6913	7	FSM	ENSMUSG00000009112.5	ENSMUST00000009256.4	6925	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAACTGGTGACTCATC	NA	NA	NA	NA	NA	NA	NA	NA	120813203	120869796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_120813319_120825416_120825578_120839815_120839924_120842528_120842686_120847726_120847797_120853163_120853308_120863638
ENSMUSG00000009145.7_0	chr6	+	3237	12	FSM	ENSMUSG00000009145.7	ENSMUST00000077502.5	3257	12	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGCAGCCTCCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	83034840	83044295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83035121_83035410_83035717_83035897_83036092_83036419_83036808_83037148_83037383_83037471_83037572_83037677_83037837_83037916_83038109_83041504_83041625_83041774_83041966_83043070_83043262_83043413
ENSMUSG00000009185.3_0	chr11	+	476	3	FSM	ENSMUSG00000009185.3	ENSMUST00000009329.3	511	3	27	8	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAACATGGGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	82006037	82007617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82006139_82006864_82006977_82007354
ENSMUSG00000009207.16_0	chr2	-	3312	14	FSM	ENSMUSG00000009207.16	ENSMUST00000111993.9	3321	14	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCATAAATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74409289	74350640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_74352642_74358435_74358519_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUSG00000009207.16_1	chr2	-	3175	13	FSM	ENSMUSG00000009207.16	ENSMUST00000064503.13	3195	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAAGATGTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	74409279	74350684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_74352642_74359974_74360146_74360849_74360921_74362219_74362326_74367647_74367846_74378181_74378234_74378318_74378403_74381404_74381446_74385331_74385391_74399284_74399473_74401278_74401321_74403881_74403971_74409162
ENSMUSG00000009214.10_0	chr2	-	1368	5	FSM	ENSMUSG00000009214.10	ENSMUST00000009358.9	1382	5	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTGTCTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26962179	26951649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26961892
ENSMUSG00000009214.10_2	chr2	-	1202	5	FSM	ENSMUSG00000009214.10	ENSMUST00000163967.2	1210	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTCTGTCTGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26957872	26951649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26952350_26952713_26952831_26956302_26956452_26957364_26957480_26957751
ENSMUSG00000009216.8_0	chr2	-	712	3	FSM	ENSMUSG00000009216.8	ENST00000496132.2	728	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTCTATCCTGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	27012929	27002492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27002903_27003559_27003676_27012743
ENSMUSG00000009281.7_0	chr6	-	696	6	FSM	ENSMUSG00000009281.7	ENSMUST00000009425.7	731	6	33	2	33	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTGTTGTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48549589	48546631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48546740_48546874_48546997_48547177_48547274_48548716_48548822_48549021_48549225_48549527
ENSMUSG00000009281.7_1	chr6	-	627	5	ISM	ENSMUSG00000009281.7	ENSMUST00000204267.3	795	6	469	2	402	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTGTTGTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48549220	48546631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_48546740_48546874_48546994_48547177_48547274_48548716_48548822_48549021
ENSMUSG00000009281.7_2	chr6	-	679	6	FSM	ENSMUSG00000009281.7	ENSMUST00000204930.3	681	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTGTGTTGTTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	48549721	48546631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48546740_48546874_48546994_48547177_48547274_48548716_48548822_48549021_48549225_48549673
ENSMUSG00000009291.14_0	chr10	+	2275	6	FSM	ENSMUSG00000009291.14	ENSMUST00000009435.12	2294	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3986	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGACTTTGATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	77417565	77434559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77417762_77423084_77423138_77425467_77425577_77428679_77428852_77429697_77429745_77432861
ENSMUSG00000009292.19_0	chr10	-	747	7	FSM	ENSMUSG00000009292.19	ENST00000621064.1	766	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGCTTCTGGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	77754840	77746010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77746130_77747122_77747240_77748411_77748514_77749638_77749745_77750545_77750633_77753913_77753988_77754698
ENSMUSG00000009293.18_0	chr10	+	2020	6	FSM	ENSMUSG00000009293.18	ENSMUST00000174510.8	2031	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTTGTGTGGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	77458119	77481827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77458251_77466559_77466596_77466682_77466729_77477293_77477413_77479302_77479444_77480280
ENSMUSG00000009356.13_0	chr11	-	1881	10	FSM	ENSMUSG00000009356.13	ENST00000421678.6	1896	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAACCTGCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	87713096	87697677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_87697881_87698068_87698307_87699952_87700127_87700941_87701195_87705072_87705234_87705722_87706048_87707237_87707445_87708123_87708254_87708559_87708678_87713024
ENSMUSG00000009356.13_1	chr11	-	1810	9	ISM	ENSMUSG00000009356.13	ENST00000421678.6	1896	10	4427	6	4427	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAACCTGCTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	87708678	87697677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_87697881_87698068_87698307_87699952_87700127_87700941_87701195_87705072_87705234_87705722_87706048_87707237_87707445_87708123_87708254_87708559
ENSMUSG00000009376.16_0	chr6	+	6795	22	FSM	ENSMUSG00000009376.16	ENSMUST00000115443.8	6809	22	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTGAGTTGGCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	17463803	17573970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17464248_17487795_17487845_17491225_17492437_17513348_17513541_17526311_17526447_17527074_17527249_17531421_17531583_17533909_17534013_17534120_17534258_17534940_17535103_17535836_17535937_17540436_17540656_17546948_17547096_17548684_17548839_17549030_17549172_17553237_17553469_17555545_17555627_17558707_17558890_17562156_17562267_17563552_17563719_17571370_17571508_17571611
ENSMUSG00000009394.14_0	chr6	+	3806	11	FSM	ENSMUSG00000009394.14	ENSMUST00000203450.2	3806	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTTAAGTTGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	115111910	115253520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115112422_115212974_115213033_115214215_115214308_115216319_115216477_115221106_115221197_115231123_115231187_115231550_115231694_115238615_115238691_115239482_115239586_115240792_115240943_115251156
ENSMUSG00000009406.14_12	chrX	-	988	5	FSM	ENSMUSG00000009406.14	ENST00000392510.3	1010	5	13	9	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCATGACTACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	20803756	20801699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803411_20803445
ENSMUSG00000009406.14_13	chrX	-	1231	6	FSM	ENSMUSG00000009406.14	ENST00000415014.1	1248	6	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCATGACTACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	20807989	20801699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803411_20803445_20803803_20807792
ENSMUSG00000009406.14_2	chrX	-	3539	6	FSM	ENSMUSG00000009406.14	ENSMUST00000009550.14	3548	6	9	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAGAGGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	20816838	20799633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20801788_20801869_20801972_20802470_20802903_20803355_20803803_20807792_20808037_20816678
ENSMUSG00000009406.14_3	chrX	-	709	6	FSM	ENSMUSG00000009406.14	ENST00000343894.8	729	6	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCCCTTTTTTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	20816821	20801680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20801788_20801869_20801910_20803742_20803803_20807792_20808037_20816205_20816321_20816678
ENSMUSG00000009418.17_1	chr1	-	12762	29	NIC	ENSMUSG00000009418.17	novel	12767	30	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCTTGGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135513093	135362317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386389_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135393576_135393748_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292
ENSMUSG00000009418.17_21	chr1	-	9306	31	FSM	ENSMUSG00000009418.17	ENSMUST00000190298.8	9353	31	38	9	38	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCATCTCAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	135615805	135366594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135395378_135395528_135396593_135396636_135397369_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899_135535643_135615656
ENSMUSG00000009418.17_7	chr1	-	9564	30	FSM	ENSMUSG00000009418.17	ENST00000367302.5	9579	30	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGCTAAGGGACCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	135535545	135366091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135369518_135371371_135371570_135376668_135376788_135377632_135377830_135378307_135378380_135378523_135378679_135379909_135380146_135380542_135380703_135380930_135381027_135381782_135381881_135382171_135382341_135382428_135382622_135382871_135383069_135386393_135386516_135388081_135388194_135388428_135388513_135391459_135391538_135391652_135391677_135392443_135392497_135395378_135395528_135396593_135396633_135397365_135397805_135398217_135398909_135399896_135400195_135400470_135400610_135460086_135460453_135464934_135465038_135512292_135513094_135530282_135530387_135534899
ENSMUSG00000009470.18_0	chr13	-	8542	23	FSM	ENSMUSG00000009470.18	ENST00000680533.1	8563	23	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGTGACCCGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	99062972	98975374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98981129_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009470.18_12	chr13	-	8193	22	FSM	ENSMUSG00000009470.18	ENST00000679378.1	8207	22	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAATAAAGTTGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	99027293	98975551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184
ENSMUSG00000009470.18_22	chr13	-	2620	22	FSM	ENSMUSG00000009470.18	ENST00000523768.5	2633	22	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGCAGTCCCAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	99062834	98982951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009470.18_23	chr13	-	2545	21	ISM	ENSMUSG00000009470.18	ENST00000523768.5	2633	22	35541	7	3	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGCAGTCCCAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	99027299	98982951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99024973_99025050_99027184
ENSMUSG00000009470.18_7	chr13	-	8438	24	FSM	ENSMUSG00000009470.18	ENSMUST00000109401.8	8453	24	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAGACGTTGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	99062884	98975533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98981129_98982928_98983072_98983835_98983911_98985662_98985763_98986615_98986692_98989362_98989459_98989907_98990007_98991650_98991739_98991819_98992087_98993396_98993484_98994893_98995066_98996270_98996497_98997148_98997302_99000215_99000385_99000935_99000997_99001476_99001596_99003553_99003677_99006747_99006830_99012111_99012246_99015127_99015235_99021022_99021173_99024973_99025050_99027184_99027299_99062758
ENSMUSG00000009471.5_0	chr7	+	1840	3	FSM	ENSMUSG00000009471.5	ENSMUST00000072514.3	1861	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATACAAAGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46025906	46028511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46026724_46027163_46027243_46027567
ENSMUSG00000009487.11_0	chr7	+	10033	56	FSM	ENSMUSG00000009487.11	ENSMUST00000164538.2	10043	56	5	5	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTGAGGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45890415	45960853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45890544_45890933_45890995_45891135_45891197_45894727_45894804_45895676_45895770_45895918_45896074_45898420_45898540_45899356_45899563_45900382_45900514_45900701_45900809_45901402_45901513_45901882_45902012_45903534_45903644_45903895_45903943_45904371_45904518_45908644_45908778_45909305_45909484_45911102_45911228_45912063_45912277_45913458_45913652_45915119_45915195_45915363_45915408_45916666_45916821_45918681_45918790_45920662_45920802_45923129_45923265_45923506_45923654_45923927_45924048_45926042_45926160_45926774_45926932_45930527_45930555_45933166_45933335_45934317_45934597_45935169_45935288_45936170_45936251_45936643_45938410_45939088_45939258_45939508_45939655_45940362_45940453_45945266_45945451_45947554_45947776_45947927_45948067_45949429_45949625_45949800_45950014_45950548_45950654_45950808_45950917_45952244_45952347_45952562_45952662_45953631_45953673_45954650_45954727_45954833_45955013_45955240_45955346_45955544_45955665_45956470_45956517_45959198_45959279_45959392
ENSMUSG00000009487.11_3	chr7	+	3539	18	FSM	ENSMUSG00000009487.11	ENSMUST00000209802.2	3558	18	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTGAGGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45944813	45960853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45944879_45945266_45945451_45947554_45947776_45947927_45948067_45949429_45949625_45949800_45950014_45950548_45950654_45950808_45950917_45952244_45952347_45952562_45952662_45953631_45953673_45954650_45954727_45954833_45955013_45955240_45955346_45955544_45955665_45956470_45956517_45959198_45959279_45959392
ENSMUSG00000009487.11_4	chr7	+	3474	17	ISM	ENSMUSG00000009487.11	ENSMUST00000209802.2	3558	18	468	4	468	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTGAGGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45945266	45960853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45945451_45947554_45947776_45947927_45948067_45949429_45949625_45949800_45950014_45950548_45950654_45950808_45950917_45952244_45952347_45952562_45952662_45953631_45953673_45954650_45954727_45954833_45955013_45955240_45955346_45955544_45955665_45956470_45956517_45959198_45959279_45959392
ENSMUSG00000009535.14_0	chr18	+	4997	11	FSM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTGGTGGTTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	68433428	68457915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_68433497_68438850_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009535.14_4	chr18	+	4930	10	ISM	ENSMUSG00000009535.14	ENSMUST00000009679.11	5008	11	5424	8	5379	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGTGGTGGTTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	68438849	68457915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_68439271_68440716_68440859_68442391_68442518_68444678_68444792_68446735_68446918_68447058_68447224_68451064_68451183_68452188_68452291_68453296_68453331_68454388
ENSMUSG00000009549.15_0	chr2	-	785	5	FSM	ENSMUSG00000009549.15	ENSMUST00000009693.15	798	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTACAGGTGGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118310185	118306336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118306789_118307307_118307341_118309401_118309515_118309858_118309932_118310071
ENSMUSG00000009555.17_0	chr2	-	1721	7	FSM	ENSMUSG00000009555.17	ENSMUST00000009699.16	1733	7	6	6	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32602790	32597455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602576
ENSMUSG00000009555.17_1	chr2	-	1559	7	FSM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32602273	32597455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042_32602125_32602221
ENSMUSG00000009555.17_2	chr2	-	1500	6	ISM	ENSMUSG00000009555.17	ENSMUST00000120105.8	1565	7	162	0	162	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATGGCTGCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32602117	32597455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_32598302_32599478_32599628_32599784_32599957_32600054_32600222_32600488_32600580_32602042
ENSMUSG00000009563.17_0	chr2	+	1515	5	FSM	ENSMUSG00000009563.17	ENSMUST00000009707.14	1536	5	14	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAACATTGACCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	32647259	32652249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32647463_32648682_32648949_32649538_32649715_32650600_32650729_32651507
ENSMUSG00000009566.13_0	chr2	-	2260	15	FSM	ENSMUSG00000009566.13	ENSMUST00000028148.11	2273	15	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACTCCTATTCTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	32584189	32572625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576656_32576749_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604_32582734_32584000
ENSMUSG00000009566.13_23	chr2	-	983	11	FSM	ENSMUSG00000009566.13	ENST00000373228.5	995	11	10	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAAGGACCCACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	32582725	32575327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32575402_32575730_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ENSMUSG00000009566.13_4	chr2	-	1978	14	FSM	ENSMUSG00000009566.13	ENST00000373225.7	1990	14	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGACTGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32582722	32572711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ENSMUSG00000009566.13_5	chr2	-	1898	13	FSM	ENSMUSG00000009566.13	ENST00000393706.6	1913	13	15	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGACTGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32582720	32572711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32576737_32576898_32577156_32577235_32577424_32577528_32577613_32577676_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ENSMUSG00000009566.13_6	chr2	-	1821	13	FSM	ENSMUSG00000009566.13	ENST00000630236.2	1831	13	10	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGACTGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	32582725	32572711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32573481_32574761_32574829_32575325_32575402_32575730_32575882_32576565_32576648_32577156_32577235_32577424_32577528_32577613_32577676_32577771_32577850_32577931_32578047_32581201_32581267_32582462_32582517_32582604
ENSMUSG00000009569.15_0	chr16	+	5815	17	FSM	ENSMUSG00000009569.15	ENSMUST00000009713.14	5815	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATGTACAGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	13074344	13232927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13074419_13082942_13083004_13144245_13144436_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ENSMUSG00000009569.15_5	chr16	+	8283	15	FSM	ENSMUSG00000009569.15	ENSMUST00000149359.2	8295	15	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGATTTTGTGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	13176289	13235386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13176624_13196127_13196194_13197703_13197760_13199391_13199468_13202057_13202220_13203469_13203649_13212686_13212825_13216087_13216351_13217943_13218044_13218516_13219549_13221018_13221175_13223112_13223272_13223628_13223767_13227480_13227542_13230023
ENSMUSG00000009575.15_0	chr15	-	8789	5	FSM	ENSMUSG00000009575.15	ENSMUST00000118152.8	8803	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGATCTTGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	103148238	103099979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103148159
ENSMUSG00000009575.15_1	chr15	-	8711	4	ISM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	2097	-5134	2050	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGGATCTTGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	103121682	103099979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498
ENSMUSG00000009575.15_4	chr15	-	3647	5	FSM	ENSMUSG00000009575.15	ENSMUST00000108813.10	3661	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATACCAGAAGAGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	103123773	103105121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103108219_103109227_103109329_103113918_103114106_103121498_103121682_103123694
ENSMUSG00000009585.19_0	chr15	+	2442	9	FSM	ENSMUSG00000009585.19	ENSMUST00000109620.10	2459	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGGTGTCTGTCTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79776616	79792621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_1	chr15	+	2352	8	FSM	ENSMUSG00000009585.19	ENSMUST00000165537.8	2360	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79776616	79792630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009585.19_3	chr15	+	2765	8	FSM	ENSMUSG00000009585.19	ENSMUST00000176325.8	2765	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	79776649	79792637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79776771_79779611_79779760_79781895_79782173_79782311_79782427_79783220_79783320_79789644_79789802_79790541_79790804_79791051
ENSMUSG00000009585.19_4	chr15	+	1816	8	FSM	ENSMUSG00000009585.19	ENSMUST00000023054.14	1842	8	14	12	14	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGTCAAAGAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	79779237	79792095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79779391_79779611_79779760_79781895_79782173_79782311_79782427_79789644_79789802_79790541_79790804_79791051_79791165_79791504
ENSMUSG00000009614.17_0	chr2	-	4494	21	FSM	ENSMUSG00000009614.17	ENSMUST00000102886.10	4521	21	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACTGGAAGATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	27137263	27078416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27079657_27081890_27082027_27086660_27086830_27087540_27087704_27101022_27101117_27105049_27105198_27108809_27108924_27110654_27110794_27114980_27115095_27117088_27117173_27118255_27118398_27120449_27120541_27120782_27120870_27124302_27124433_27125489_27125595_27129378_27129480_27129626_27129751_27131397_27131578_27132713_27132893_27134180_27134536_27136664
ENSMUSG00000009614.17_7	chr2	-	1910	16	FSM	ENSMUSG00000009614.17	ENST00000422262.6	1917	16	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGAGTGAACCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27129719	27081894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27082027_27086660_27086830_27087540_27087704_27101022_27101117_27105049_27105198_27108809_27108924_27110654_27110794_27114980_27115095_27117088_27117173_27118255_27118398_27120445_27120541_27120782_27120870_27124302_27124433_27125489_27125595_27129378_27129480_27129626
ENSMUSG00000009621.19_0	chr2	-	5214	28	FSM	ENSMUSG00000009621.19	ENSMUST00000056176.8	5221	28	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGGTTAGCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27317039	27152116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27154224_27157241_27157397_27158162_27158250_27158910_27159035_27160139_27160228_27161786_27161904_27163699_27163753_27165011_27165087_27167227_27167356_27168608_27168631_27169202_27169220_27171912_27172002_27172300_27172403_27173320_27173431_27175644_27175778_27176450_27176537_27178617_27178705_27181361_27181431_27181820_27181917_27182681_27182782_27186134_27186236_27187679_27187749_27189385_27189485_27192019_27192123_27208939_27209009_27226691_27226751_27276501_27276619_27316287
ENSMUSG00000009630.11_0	chr8	+	1439	7	FSM	ENSMUSG00000009630.11	ENSMUST00000009774.11	1469	7	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACCATTTTTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	34089675	34109462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34090047_34100682_34100893_34101775_34101950_34105477_34105568_34105693_34105856_34107054_34107174_34109149
ENSMUSG00000009633.4_0	chr1	-	850	2	FSM	ENSMUSG00000009633.4	ENSMUST00000009777.4	871	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCTATCTCATTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	192955511	192954475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192955111_192955296
ENSMUSG00000009640.12_0	chr4	-	1559	11	FSM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGATTGTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117539469	117531883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029_117539180_117539410
ENSMUSG00000009640.12_2	chr4	-	1491	10	ISM	ENSMUSG00000009640.12	ENSMUST00000102687.4	1566	11	300	6	300	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGCTGATTGTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117539170	117531883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_117531992_117532217_117532514_117532623_117532697_117532928_117533001_117533146_117533333_117533546_117533715_117533805_117533965_117538039_117538236_117538470_117538563_117539029
ENSMUSG00000009647.14_0	chr10	-	2857	8	FSM	ENSMUSG00000009647.14	ENSMUST00000020312.13	2872	8	12	3	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCATGGCATCTCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59452502	59282808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59452345
ENSMUSG00000009647.14_1	chr10	-	3096	8	FSM	ENSMUSG00000009647.14	ENST00000536019.5	3106	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCATGGCATCTCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59452036	59282808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59284681_59287027_59287145_59290767_59290972_59292470_59292632_59302275_59302381_59303447_59303619_59326908_59326979_59451640
ENSMUSG00000009654.5_0	chr10	-	1150	7	FSM	ENSMUSG00000009654.5	ENST00000622652.1	1166	7	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1933	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGCTTCTTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	59274725	59259762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59259935_59261198_59261299_59265312_59265474_59266714_59266838_59271688_59271812_59273531_59273640_59274362
ENSMUSG00000009681.11_0	chr10	+	6814	23	FSM	ENSMUSG00000009681.11	ENSMUST00000164107.3	6839	23	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTACTTCGGTTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	74896442	75020747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_74898143_74960855_74961029_74966852_74966958_74967330_74967517_74971725_74971834_74976821_74976883_74978913_74978967_74981153_74981295_74989717_74989840_74990729_74990899_74992909_74993030_74993841_74993918_74995617_74995723_74996161_74996237_75001876_75001975_75003938_75004071_75011108_75011169_75012174_75012285_75013715_75013856_75015955_75016091_75016966_75017073_75017400_75017564_75018071
ENSMUSG00000009681.11_1	chr10	+	527	5	FSM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCATGTCCCAGGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	75011108	75017549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75011169_75012174_75012285_75013715_75013789_75015955_75016091_75017400
ENSMUSG00000009681.11_2	chr10	+	460	4	ISM	ENSMUSG00000009681.11	ENST00000621462.4	532	5	1074	4	1074	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCATGTCCCAGGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	75012181	75017549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75012285_75013715_75013789_75015955_75016091_75017400
ENSMUSG00000009687.15_0	chr7	-	1155	8	FSM	ENSMUSG00000009687.15	ENSMUST00000161805.8	1166	8	6	5	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTGTCTTCTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30741258	30732151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821
ENSMUSG00000009687.15_2	chr7	-	1158	9	FSM	ENSMUSG00000009687.15	ENSMUST00000161684.8	1172	9	11	3	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTCTGTCTTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	30741895	30732153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30732444_30734633_30734709_30734810_30734841_30735860_30735942_30737245_30737354_30738462_30738520_30739607_30739683_30740821_30740883_30741514
ENSMUSG00000009733.10_0	chr15	-	3288	16	FSM	ENSMUSG00000009733.10	ENSMUST00000229696.2	3302	16	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGGTTTCTAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100449882	100400634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ENSMUSG00000009733.10_11	chr15	-	1876	14	FSM	ENSMUSG00000009733.10	ENSMUST00000229581.2	1903	14	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTGAAAATCTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	100449646	100407417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100407556_100409575_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUSG00000009733.10_14	chr15	-	1650	12	FSM	ENSMUSG00000009733.10	ENST00000548115.5	1667	12	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAGTGACTCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	100449716	100409580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100409719_100410089_100410215_100410961_100411053_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUSG00000009733.10_15	chr15	-	1205	10	ISM	ENSMUSG00000009733.10	ENST00000549867.5	1248	11	566	5	316	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAGTGACTCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	100449352	100409580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_100409719_100410089_100410215_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205
ENSMUSG00000009733.10_9	chr15	-	3194	16	FSM	ENSMUSG00000009733.10	ENSMUST00000009877.8	3220	16	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGAGTTTTTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100449843	100400683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100402325_100404086_100404139_100409575_100409719_100410089_100410215_100410961_100411047_100411909_100412004_100412684_100412734_100415830_100415920_100416450_100416562_100418443_100418597_100420269_100420377_100423447_100423554_100425757_100425835_100426275_100426428_100449205_100449363_100449790
ENSMUSG00000009739.18_0	chr15	-	4555	6	FSM	ENSMUSG00000009739.18	ENSMUST00000176271.9	4575	6	19	1	19	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCTGCCTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	100484227	100473199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100476500_100477756_100477926_100478690_100478833_100481108_100481313_100481911_100482041_100483616
ENSMUSG00000009741.16_0	chr9	+	3821	17	FSM	ENSMUSG00000009741.16	ENSMUST00000084885.12	3850	17	29	0	29	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTGTCACTCATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	113760030	113806267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_113760288_113760596_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113788443_113788552_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413
ENSMUSG00000009741.16_7	chr9	+	2104	16	FSM	ENSMUSG00000009741.16	ENSMUST00000116492.3	2111	16	7	0	7	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGGGAGCGCTCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	113760638	113805885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_113760835_113773915_113774068_113780675_113780753_113785030_113785137_113785774_113785882_113787665_113787819_113787896_113788008_113793619_113793724_113795302_113795358_113795559_113795654_113798393_113798485_113799209_113799329_113801818_113801962_113802586_113802639_113804413_113804646_113805573
ENSMUSG00000009772.16_0	chr1	+	2925	8	FSM	ENSMUSG00000009772.16	ENSMUST00000072177.14	2936	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGAAAAACAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	132243863	132261020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132244211_132252690_132252812_132253943_132253968_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ENSMUSG00000009772.16_1	chr1	+	3088	7	FSM	ENSMUSG00000009772.16	ENSMUST00000082125.6	3107	7	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCAATCAATCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	132243868	132261212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132244211_132252690_132252812_132255434_132255587_132255868_132255935_132257695_132257816_132258296_132258430_132259058
ENSMUSG00000009828.16_0	chr9	+	2517	14	FSM	ENSMUSG00000009828.16	ENSMUST00000118869.8	2540	14	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAAACCGGGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78016491	78075215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78016764_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUSG00000009828.16_4	chr9	+	6541	14	FSM	ENSMUSG00000009828.16	ENSMUST00000044551.8	6560	14	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCAAGAAACATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	78020606	78079380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78020738_78038576_78038854_78042877_78042933_78047257_78047380_78048475_78048556_78057810_78057944_78060846_78061019_78062630_78062799_78064922_78065235_78067650_78067842_78067944_78068094_78071812_78071942_78074191_78074315_78074881
ENSMUSG00000009863.15_0	chr4	+	1120	8	FSM	ENSMUSG00000009863.15	ENSMUST00000010007.9	1142	8	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGATAAATAGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	140688523	140706492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140688788_140693805_140693940_140698447_140698534_140700193_140700331_140700974_140701092_140703425_140703528_140704688_140704812_140706335
ENSMUSG00000009894.16_0	chr11	-	1885	5	FSM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	3	8	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGGAGCCGGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	59340822	59297967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803_59329340_59340740
ENSMUSG00000009894.16_1	chr11	-	1806	4	ISM	ENSMUSG00000009894.16	ENSMUST00000010038.10	1896	5	11483	8	11483	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGGAGCCGGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	59329342	59297967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_59298637_59312350_59312476_59319166_59319640_59328803
ENSMUSG00000009905.6_0	chr1	-	5500	10	FSM	ENSMUSG00000009905.6	ENSMUST00000010049.6	5518	10	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCTTGAATTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	106687444	106648193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106671398_106671591_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ENSMUSG00000009905.6_3	chr1	-	930	9	FSM	ENSMUSG00000009905.6	ENST00000326575.9	937	9	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTGGCTGTAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	106687376	106652503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_106652752_106655358_106655461_106662276_106662361_106667060_106667145_106675217_106675314_106675500_106675567_106680941_106680999_106683173_106683264_106687273
ENSMUSG00000009907.18_0	chr1	-	4518	12	FSM	ENSMUSG00000009907.18	ENSMUST00000112736.8	4539	12	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTATATTTGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	106724383	106691807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_106694740_106700131_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ENSMUSG00000009907.18_3	chr1	-	4606	11	FSM	ENSMUSG00000009907.18	ENSMUST00000094646.6	4633	11	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTAAATTATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106724445	106697173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_106700279_106701736_106701878_106704999_106705220_106706698_106706781_106707691_106707841_106708233_106708391_106710395_106710516_106714432_106714501_106717658_106717816_106719407_106719520_106724150
ENSMUSG00000009927.10_0	chr9	+	1263	5	FSM	ENSMUSG00000009927.10	ENSMUST00000080300.9	1280	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAAGTGTGGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	44318444	44321716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44319055_44319284_44319381_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009927.10_4	chr9	+	380	4	FSM	ENSMUSG00000009927.10	ENSMUST00000216076.2	393	4	2	11	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATCAAATGAATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	44318993	44321478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44319055_44319982_44320167_44321250_44321350_44321442
ENSMUSG00000009995.18_0	chrX	+	1832	10	FSM	ENSMUSG00000009995.18	ENSMUST00000069722.13	1851	10	13	6	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATACCTCTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73326315	73333751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUSG00000009995.18_14	chrX	+	842	7	FSM	ENSMUSG00000009995.18	ENST00000369776.8	850	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTGTGCCCTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	73326604	73333017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73326779_73327253_73327300_73327537_73327624_73331624_73331706_73332056_73332321_73332710_73332789_73332904
ENSMUSG00000009995.18_3	chrX	+	1730	9	FSM	ENSMUSG00000009995.18	ENSMUST00000124200.8	1742	9	9	3	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATACCTCTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73326364	73333751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332056_73332120_73332710_73332789_73332904
ENSMUSG00000009995.18_6	chrX	+	1775	10	FSM	ENSMUSG00000009995.18	ENSMUST00000114180.11	1786	10	8	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATACCTCTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73326375	73333751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73326723_73326877_73327007_73327253_73327300_73327537_73327624_73331624_73331706_73331783_73331826_73332053_73332120_73332267_73332321_73332710_73332789_73332904
ENSMUSG00000010025.20_0	chr11	-	3071	10	FSM	ENSMUSG00000010025.20	ENSMUST00000074127.14	3091	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATAAATTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	61158001	61135688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61137148_61139687_61139924_61141768_61141869_61144449_61144617_61147564_61147707_61149566_61149685_61153044_61153254_61155071_61155158_61155889_61156122_61157679
ENSMUSG00000010044.13_1	chr9	+	1459	11	FSM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGCGAATACGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107424660	107428390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107424748_107424998_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010044.13_6	chr9	+	1373	10	ISM	ENSMUSG00000010044.13	ENST00000360165.7	1470	11	342	6	342	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGCGAATACGCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	107424997	107428390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_107425108_107425868_107425986_107426078_107426133_107426226_107426365_107426478_107426568_107426986_107427247_107427482_107427609_107427696_107427819_107427938_107428065_107428159
ENSMUSG00000010045.3_0	chr9	+	2179	2	FSM	ENSMUSG00000010045.3	ENSMUST00000010189.3	2194	2	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACCTTGTGCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107411155	107415869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107412529_107415063
ENSMUSG00000010047.13_0	chr9	+	2062	5	FSM	ENSMUSG00000010047.13	ENSMUST00000195752.6	2062	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTCTTTTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107445143	107449978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107445176_107446181_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUSG00000010047.13_1	chr9	+	1893	4	FSM	ENSMUSG00000010047.13	ENSMUST00000010191.13	1893	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCTTGTCTTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	107446315	107449975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107446433_107447302_107448270_107448690_107448781_107449256
ENSMUSG00000010048.11_0	chr9	+	1784	13	FSM	ENSMUSG00000010048.11	ENST00000436390.5	1790	13	3	3	3	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAACCAAATGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	107464716	107469971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107464792_107464921_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010048.11_5	chr9	+	2016	12	FSM	ENSMUSG00000010048.11	ENSMUST00000010192.11	2056	12	33	7	33	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCCTGTGGCCTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	107464873	107470230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107465146_107467101_107467222_107467307_107467393_107467496_107467622_107467703_107467862_107467994_107468046_107468130_107468310_107468400_107468507_107468766_107468905_107469273_107469403_107469474_107469571_107469673
ENSMUSG00000010051.16_0	chr9	+	2644	5	FSM	ENSMUSG00000010051.16	ENSMUST00000112387.9	2706	5	26	36	-5	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107454151	107458873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298_107456585_107457655
ENSMUSG00000010051.16_3	chr9	+	2999	4	FSM	ENSMUSG00000010051.16	ENSMUST00000010195.14	3014	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCACCCTGCGCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	107454165	107458171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107454278_107454751_107455676_107456079_107456170_107456298
ENSMUSG00000010054.5_0	chr9	+	1647	3	FSM	ENSMUSG00000010054.5	ENSMUST00000010198.5	1665	3	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGAGAGTGGCGTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	107440470	107443310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107440732_107441774_107441896_107442045
ENSMUSG00000010057.9_0	chr9	+	1425	11	FSM	ENSMUSG00000010057.9	ENSMUST00000010201.9	1441	11	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGAGTACTGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	107419438	107422903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107419653_107420180_107420273_107420366_107420536_107420705_107420815_107421349_107421487_107421578_107421677_107421796_107421834_107421945_107422040_107422112_107422231_107422443_107422587_107422689
ENSMUSG00000010066.16_0	chr9	+	5566	38	FSM	ENSMUSG00000010066.16	ENST00000424201.7	5577	38	7	4	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCACGGGTGGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	107277074	107406592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107277483_107303251_107303334_107342751_107342869_107374658_107374719_107383146_107383192_107386393_107386536_107389199_107389332_107389501_107389560_107390252_107390304_107390431_107390532_107390671_107390831_107391033_107391142_107391243_107391323_107391830_107391881_107392058_107392149_107392349_107392422_107392617_107392693_107394293_107394369_107394449_107394522_107394611_107394684_107394789_107394852_107395391_107395469_107399321_107399383_107401293_107401392_107401596_107401688_107401810_107401874_107402029_107402134_107402355_107402455_107402542_107402632_107402811_107402860_107403099_107403172_107403261_107403415_107403541_107403595_107403683_107403740_107403886_107404014_107404135_107404246_107404352_107404436_107404519
ENSMUSG00000010067.14_0	chr9	+	1775	6	FSM	ENSMUSG00000010067.14	ENSMUST00000093786.9	1787	6	12	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTCTATAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	107428765	107439466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107429046_107431336_107431444_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUSG00000010067.14_4	chr9	+	1710	5	FSM	ENSMUSG00000010067.14	ENSMUST00000010211.7	1727	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTCTGGTTTTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	107431791	107439455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107432125_107434651_107434757_107434968_107435267_107435385_107435502_107438597
ENSMUSG00000010080.16_0	chr11	-	3884	10	FSM	ENSMUSG00000010080.16	ENSMUST00000127305.2	3884	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCCTCTGTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	94390800	94380424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94382306_94382396_94382631_94382734_94382852_94382991_94383262_94383687_94383776_94384598_94384731_94384918_94385000_94385759_94385879_94386827_94387508_94390518
ENSMUSG00000010095.14_0	chr19	-	2798	10	FSM	ENSMUSG00000010095.14	ENSMUST00000170157.8	2813	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGGATATGGATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	8700724	8684251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705_8691117_8700347
ENSMUSG00000010095.14_4	chr19	-	1801	9	FSM	ENSMUSG00000010095.14	ENSMUST00000010239.6	1819	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTATACTGGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8691231	8684986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690705
ENSMUSG00000010095.14_9	chr19	-	1639	9	FSM	ENSMUSG00000010095.14	ENST00000377889.6	1650	9	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGTCTTCCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	8691113	8685034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8685459_8685557_8685642_8686368_8686510_8686593_8686775_8686913_8686973_8687078_8687148_8689197_8689293_8690093_8690268_8690701
ENSMUSG00000010097.16_0	chr19	+	2390	21	FSM	ENSMUSG00000010097.16	ENST00000532297.5	2407	21	9	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTAGTTTGTGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	8734356	8748266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8734628_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_26	chr19	+	2316	21	FSM	ENSMUSG00000010097.16	ENSMUST00000010241.14	2326	21	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGGCTTGTTTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	8734445	8748285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8734624_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8742396_8744160_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010097.16_43	chr19	+	4036	20	FSM	ENSMUSG00000010097.16	ENST00000531709.6	4045	20	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTACTGGCTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	8734491	8748282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8734628_8739675_8739860_8740046_8740201_8740896_8740981_8741060_8741166_8741279_8741361_8741443_8741514_8741624_8741714_8741862_8741971_8742285_8744198_8744443_8744513_8744591_8744648_8744730_8744839_8744936_8744996_8745093_8745210_8745337_8745381_8745952_8746026_8746364_8746548_8747623_8747685_8747937
ENSMUSG00000010110.18_0	chr19	+	2235	11	FSM	ENSMUSG00000010110.18	ENSMUST00000176381.8	2251	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGAGTTGGAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	8718786	8733427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8718940_8719617_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010110.18_4	chr19	+	2100	10	FSM	ENSMUSG00000010110.18	ENSMUST00000073430.14	2112	10	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCACTAGTGTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	8719171	8732999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8719862_8720217_8720289_8720443_8720500_8720716_8720788_8725824_8725942_8726018_8726076_8726170_8726253_8727029_8727137_8727269_8727392_8732272
ENSMUSG00000010110.18_7	chr19	+	555	2	FSM	ENSMUSG00000010110.18	ENSMUST00000176570.2	563	2	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTAGGGACAACTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	8726764	8727452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8727137_8727269
ENSMUSG00000010154.8_1	chr8	+	2314	14	FSM	ENSMUSG00000010154.8	ENST00000378247.8	2332	14	11	7	11	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTCTCTTTCCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	124059487	124096258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124059775_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090140_124095397_124095533_124095910
ENSMUSG00000010154.8_2	chr8	+	2144	13	FSM	ENSMUSG00000010154.8	ENST00000393062.6	2162	13	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATATATATATGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	124059484	124096230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124059775_124073378_124073423_124080757_124081115_124083261_124083340_124083452_124083618_124084381_124084469_124084848_124084973_124086080_124086251_124086811_124087002_124087988_124088105_124089757_124089893_124090061_124090130_124095910
ENSMUSG00000010205.12_0	chr9	-	3450	13	FSM	ENSMUSG00000010205.12	ENSMUST00000115487.3	3470	13	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATCAGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21003294	20985463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ENSMUSG00000010277.8_0	chr11	+	7425	39	FSM	ENSMUSG00000010277.8	ENSMUST00000010421.7	7443	39	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTCTGTGTCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	78152589	78181443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78152744_78153524_78153655_78154415_78154466_78154737_78154886_78155289_78155409_78156004_78156066_78156398_78156589_78157176_78157301_78157420_78157546_78157761_78157830_78157922_78158069_78158924_78159044_78159151_78159316_78159464_78159724_78160313_78160520_78162116_78163210_78163603_78163796_78163922_78164126_78164266_78164386_78164507_78164729_78165290_78165482_78165613_78165714_78165832_78166036_78167865_78168161_78169872_78170031_78170534_78170742_78173884_78173985_78174925_78175109_78175564_78175687_78176263_78176420_78176500_78176623_78177338_78177520_78178121_78178209_78178509_78178621_78178757_78178894_78178990_78179122_78179766_78179869_78180111_78180247_78180629
ENSMUSG00000010290.8_0	chr1	+	3441	4	FSM	ENSMUSG00000010290.8	ENSMUST00000010434.8	3458	4	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTATCTTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	43137875	43155096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_43138023_43139874_43140042_43150157_43150534_43152345
ENSMUSG00000010307.8_0	chr7	+	1814	3	FSM	ENSMUSG00000010307.8	ENSMUST00000010451.8	1831	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCCATTGGCTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	46700357	46704517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46700550_46702597_46702863_46703160
ENSMUSG00000010358.14_0	chr11	+	1344	7	FSM	ENSMUSG00000010358.14	ENSMUST00000010502.13	1362	7	12	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTACCACCCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	101339244	101349518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348349_101348445_101348633_101348716_101348824_101349026
ENSMUSG00000010358.14_3	chr11	+	1043	7	FSM	ENSMUSG00000010358.14	ENST00000438323.2	1064	7	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAGGCCTGCATGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	101339246	101349211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101339449_101347391_101347491_101348015_101348164_101348241_101348357_101348445_101348633_101348716_101348824_101349026
ENSMUSG00000010362.10_0	chr11	+	1113	7	FSM	ENSMUSG00000010362.10	ENSMUST00000010506.10	1124	7	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGTGTGGTTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101518775	101526923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101518891_101519098_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525700_101526573
ENSMUSG00000010362.10_5	chr11	+	369	3	FSM	ENSMUSG00000010362.10	ENST00000617591.4	387	3	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAAGACCTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101519099	101526640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101519279_101521063_101521187_101526573
ENSMUSG00000010362.10_7	chr11	+	706	6	FSM	ENSMUSG00000010362.10	ENST00000619262.4	731	6	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAAGACCTGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101519106	101526640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101519279_101521063_101521187_101521645_101521806_101524627_101524727_101525613_101525704_101526578
ENSMUSG00000010376.16_0	chr14	-	813	4	FSM	ENSMUSG00000010376.16	ENSMUST00000010520.10	824	4	10	1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGACTCTTTCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	55909571	55899720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55900083_55900871_55900955_55901268_55901317_55909251
ENSMUSG00000010392.9_0	chr11	-	4210	8	ISM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	2230	13	2230	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCTAAATAGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	76652175	76617440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060
ENSMUSG00000010392.9_1	chr11	-	4276	9	FSM	ENSMUSG00000010392.9	ENSMUST00000010536.9	4289	9	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCTAAATAGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	76654405	76617440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538_76645627_76652060_76652182_76654345
ENSMUSG00000010392.9_7	chr11	-	844	7	ISM	ENSMUSG00000010392.9	ENST00000225724.9	857	8	6	9121	6	-3261	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGCAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76645623	76620688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194_76645303_76645538
ENSMUSG00000010392.9_8	chr11	-	760	6	ISM	ENSMUSG00000010392.9	ENST00000225724.9	857	8	326	9121	326	-3261	internal_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAGGCAGAAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76645303	76620688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_76621060_76625394_76625478_76628207_76628238_76639333_76639409_76641636_76641729_76645194
ENSMUSG00000010406.13_0	chr14	+	415	5	FSM	ENSMUSG00000010406.13	ENSMUST00000010550.12	418	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTCTCTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54664365	54667210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54664418_54664490_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUSG00000010406.13_3	chr14	+	363	4	FSM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	104	-4	104	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTCTCTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54664490	54667210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54664549_54664627_54664696_54666040_54666106_54667038
ENSMUSG00000010406.13_5	chr14	+	305	3	ISM	ENSMUSG00000010406.13	ENSMUST00000199195.3	463	4	241	-4	241	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCTCTCTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	54664627	54667210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_54664696_54666040_54666106_54667038
ENSMUSG00000010453.13_0	chr1	-	4523	21	FSM	ENSMUSG00000010453.13	ENSMUST00000185912.7	4527	21	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCGTTGCTTCAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36408238	36374814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404726_36406830_36406993_36408185
ENSMUSG00000010453.13_1	chr1	-	4466	20	ISM	ENSMUSG00000010453.13	ENSMUST00000185912.7	4527	21	1247	7	104	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGCGTTGCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36406991	36374817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404726_36406830
ENSMUSG00000010453.13_2	chr1	-	4660	21	FSM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCTTCAGCTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36408259	36374810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849_36407116_36408185
ENSMUSG00000010453.13_3	chr1	-	4575	20	ISM	ENSMUSG00000010453.13	ENSMUST00000010597.10	4663	21	1151	7	11	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGCGTTGCTTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36407111	36374817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_36376733_36382331_36382466_36382753_36382977_36383150_36383261_36383996_36384128_36384465_36384548_36384918_36385111_36387605_36387763_36387898_36388100_36388482_36388547_36390713_36390872_36391006_36391082_36392674_36392747_36392852_36392955_36393178_36393296_36393729_36393862_36397120_36397307_36397450_36397542_36404562_36404734_36406849
ENSMUSG00000010461.17_1	chr10	-	4908	15	FSM	ENSMUSG00000010461.17	ENST00000355167.8	4920	15	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATACCTTTGCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	23049012	22978882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23048896
ENSMUSG00000010461.17_6	chr10	-	2579	17	FSM	ENSMUSG00000010461.17	ENST00000531901.5	2600	17	10	11	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTAATGAAATACAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	23049014	22981375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22982188_22985730_22985832_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027811_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23039291_23039385_23047523_23047593_23048896
ENSMUSG00000010461.17_7	chr10	-	1774	15	FSM	ENSMUSG00000010461.17	ENST00000452339.6	1781	15	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGGATGAAATCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	23049017	22982003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22982188_22985869_22985971_22987458_22987581_22989808_22989924_22992450_22992612_22992717_22992777_22999749_22999840_23014088_23014173_23015858_23015996_23027829_23027996_23031817_23031898_23033149_23033294_23033409_23033553_23034985_23035053_23048896
ENSMUSG00000010476.15_0	chr7	-	5089	17	FSM	ENSMUSG00000010476.15	ENST00000440978.2	5109	17	11	9	-3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGACTGACAAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	136916146	136795418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_136798132_136799159_136799273_136800220_136800419_136800822_136801012_136802111_136802290_136802854_136802921_136807913_136808003_136826871_136826999_136827484_136827616_136832892_136833038_136837635_136837718_136909213_136909283_136911027_136911102_136914077_136914134_136914821_136914886_136915246_136915404_136915508
ENSMUSG00000010505.17_0	chr2	+	5533	23	FSM	ENSMUSG00000010505.17	ENST00000536311.5	5550	23	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGCATAGGTGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	181408886	181469552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181409135_181424333_181424435_181431314_181431370_181432341_181432373_181436558_181436622_181437439_181437688_181438876_181439777_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448223_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181453147_181453217_181456841_181456905_181457322_181457407_181461799_181462022_181463724_181463817_181464448_181464553_181467190_181467335_181467696
ENSMUSG00000010505.17_13	chr2	+	1680	12	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	4224	5	4224	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTTTAACTAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	181436563	181457465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_181436622_181437439_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181456841_181456905_181457322
ENSMUSG00000010505.17_16	chr2	+	1624	11	ISM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	5098	5	5098	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTTTAACTAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	181437437	181457465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181456841_181456905_181457322
ENSMUSG00000010505.17_6	chr2	+	1718	13	FSM	ENSMUSG00000010505.17	ENST00000360149.9	1723	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTTTAACTAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	181432339	181457465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181432373_181436558_181436622_181437439_181437688_181442809_181442945_181443607_181443699_181444708_181444823_181446719_181446935_181448308_181448434_181449183_181449454_181452037_181452193_181452957_181453021_181456841_181456905_181457322
ENSMUSG00000010517.8_0	chr4	+	4718	20	FSM	ENSMUSG00000010517.8	ENST00000396153.7	4728	20	9	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGGTTGTTCTGGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	109533790	109821576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995_109819967_109820129
ENSMUSG00000010517.8_4	chr4	+	4454	19	FSM	ENSMUSG00000010517.8	ENSMUST00000102724.5	4468	19	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTGTGAAGTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109533792	109821151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109534270_109567986_109568056_109577952_109578000_109584586_109584790_109593787_109593880_109600062_109600155_109614776_109614883_109651964_109652052_109687002_109687099_109697512_109697640_109698505_109698570_109699484_109699567_109719005_109719161_109740832_109740970_109748098_109748188_109782494_109782576_109783081_109783160_109792679_109792896_109818995
ENSMUSG00000010554.15_0	chr11	+	2023	11	FSM	ENSMUSG00000010554.15	ENSMUST00000010698.13	2073	11	31	19	31	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTACAAGGAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	74661686	74708701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74693718_74693839_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010554.15_1	chr11	+	12566	10	FSM	ENSMUSG00000010554.15	ENSMUST00000141755.8	12584	10	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTGAAGCCTGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	74661663	74719341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74661811_74664347_74664476_74674883_74675084_74678380_74678522_74683028_74683145_74686807_74686951_74694656_74694727_74696078_74696169_74707695_74707870_74707984
ENSMUSG00000010607.9_0	chr9	+	684	2	FSM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAAGACTGTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22068142	22069644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22068210_22069027
ENSMUSG00000010607.9_1	chr9	+	611	1	ISM	ENSMUSG00000010607.9	ENSMUST00000123680.2	695	2	892	10	792	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAAGACTGTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22069033	22069644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_22069000_22069600
ENSMUSG00000010608.16_0	chr12	+	4209	19	FSM	ENSMUSG00000010608.16	ENSMUST00000048155.16	4226	19	12	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATAATTGTGTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	83679037	83729892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83710752_83711034_83714865_83715083_83715192_83715283_83718681_83718756_83719507_83719659_83721112_83721438_83721817_83722093_83722855_83722955_83724628_83724677_83728276
ENSMUSG00000010608.16_15	chr12	+	1519	11	FSM	ENSMUSG00000010608.16	ENST00000526754.5	1553	11	9	25	9	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGAAATCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	83679043	83708823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83679192_83689402_83689524_83691172_83691223_83692910_83693079_83694971_83695030_83698060_83698219_83706196_83706383_83707081_83707136_83707368_83707453_83707980_83708043_83708393
ENSMUSG00000010609.16_2	chr1	-	1991	11	FSM	ENSMUSG00000010609.16	ENSMUST00000111108.10	1997	11	4	2	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCTGGTGTTTGGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	180083861	180054570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180083787
ENSMUSG00000010609.16_3	chr1	-	1782	9	FSM	ENSMUSG00000010609.16	ENST00000678320.1	1805	9	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACAGATGCTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	180073308	180054592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178
ENSMUSG00000010609.16_4	chr1	-	1546	12	FSM	ENSMUSG00000010609.16	ENSMUST00000111105.8	1575	12	6	23	6	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAGAAGAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	180075709	180055030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180055294_180056407_180056527_180056950_180057053_180057406_180057491_180061175_180061275_180062553_180062775_180063475_180063544_180066437_180066580_180068295_180068511_180073178_180073323_180074441_180074457_180075635
ENSMUSG00000010660.4_0	chr9	-	2630	15	FSM	ENSMUSG00000010660.4	ENSMUST00000010804.4	2657	15	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACAAGATAAATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	118922557	118900608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118922425
ENSMUSG00000010660.4_2	chr9	-	2688	15	FSM	ENSMUSG00000010660.4	ENSMUST00000214470.2	2706	15	4	14	4	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACAAGATAAATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	118917325	118900608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_118900956_118901090_118901241_118901317_118901451_118901542_118901722_118902523_118902641_118902830_118902991_118903232_118903392_118903477_118903628_118903703_118903849_118903940_118904143_118904831_118905064_118905151_118905282_118909989_118910219_118913657_118913823_118917135
ENSMUSG00000010663.6_0	chr19	+	3442	12	FSM	ENSMUSG00000010663.6	ENSMUST00000010807.6	3460	12	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAGAATGTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	10160262	10174231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10160629_10162290_10162402_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010663.6_8	chr19	+	3281	11	FSM	ENSMUSG00000010663.6	ENSMUST00000235160.2	3301	11	10	10	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAGAATGTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	10160312	10174231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10160629_10163048_10163247_10163741_10163844_10164118_10164248_10168803_10168865_10170275_10170353_10171064_10171163_10171359_10171457_10171681_10171762_10171852_10171979_10172234
ENSMUSG00000010721.16_0	chr5	-	4887	17	FSM	ENSMUSG00000010721.16	ENSMUST00000055195.11	4926	17	27	12	-27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACCTTATACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29583355	29434811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29583124
ENSMUSG00000010721.16_2	chr5	-	4827	17	FSM	ENSMUSG00000010721.16	ENSMUST00000179191.6	4836	17	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCTGAGAAAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	29583388	29434820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29498810_29498827_29551760_29551905_29566045_29566086_29568880_29568954_29583124
ENSMUSG00000010721.16_3	chr5	-	4737	16	NIC	ENSMUSG00000010721.16	novel	4836	17	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAACCTTATACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29583305	29434811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29551760_29551905_29566045_29566086_29568880_29568954_29583124
ENSMUSG00000010721.16_6	chr5	-	3418	18	FSM	ENSMUSG00000010721.16	ENSMUST00000196321.5	3422	18	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTTAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29583300	29437120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_29438147_29439975_29440138_29457740_29457808_29459239_29459331_29459543_29459618_29463055_29463134_29463676_29463754_29468392_29468474_29492388_29492462_29496270_29496336_29497149_29497219_29497820_29497948_29528799_29528904_29551764_29551905_29566045_29566086_29568880_29568954_29569918_29570814_29583124
ENSMUSG00000010751.16_0	chr7	-	1744	1	FSM	ENSMUSG00000010751.16	ENSMUST00000171066.2	1780	1	27	9	27	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATCTAATCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	143190295	143188551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143188600_143190300
ENSMUSG00000010751.16_1	chr7	-	4154	6	FSM	ENSMUSG00000010751.16	ENSMUST00000075588.13	4170	6	9	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATCTAATCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	143203389	143188551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143192174_143193638_143193713_143194488_143194601_143197012_143197142_143198517_143198609_143203263
ENSMUSG00000010755.18_0	chr7	-	3207	23	FSM	ENSMUSG00000010755.18	ENSMUST00000010899.14	3222	23	4	11	4	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACCTAAGATGAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	143153823	143110977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143146148_143146398_143153718
ENSMUSG00000010755.18_10	chr7	-	2378	21	ISM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	11476	6	-2066	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGAGGTCTGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	143142317	143111449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228
ENSMUSG00000010755.18_20	chr7	-	663	6	FSM	ENSMUSG00000010755.18	ENST00000603171.1	673	6	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGGGAAGGTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	143140246	143128261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139514_143140151
ENSMUSG00000010755.18_9	chr7	-	2453	22	FSM	ENSMUSG00000010755.18	ENSMUST00000105909.4	2462	22	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGAGGTCTGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	143153790	143111449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143111744_143112864_143112949_143113385_143113446_143115595_143115664_143116697_143116779_143118720_143118803_143122051_143122121_143122669_143122860_143123136_143123235_143123569_143123674_143123756_143123887_143124278_143124408_143125220_143125334_143128249_143128372_143129654_143129744_143130322_143130464_143138384_143138535_143139435_143139535_143140151_143140249_143140841_143140931_143142228_143142321_143153718
ENSMUSG00000010803.14_0	chr11	-	4269	11	FSM	ENSMUSG00000010803.14	ENST00000428797.7	4278	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATCATCCACAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	42073728	42021744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992_42073217_42073627
ENSMUSG00000010803.14_12	chr11	-	1767	10	FSM	ENSMUSG00000010803.14	ENST00000637827.1	1788	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACGGAGATAGACAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	42071073	42024074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42070920
ENSMUSG00000010803.14_3	chr11	-	4170	10	FSM	ENSMUSG00000010803.14	ENSMUST00000020707.12	4688	10	539	-21	-228	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATCATCCACAGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	42073218	42021744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_42024618_42026234_42026438_42031075_42031229_42037916_42038061_42044160_42044244_42045635_42045857_42053380_42053449_42066728_42066839_42070386_42070476_42072992
ENSMUSG00000010830.9_0	chr15	+	1396	5	FSM	ENSMUSG00000010830.9	ENSMUST00000010974.9	1411	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTATTGTCAAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	79400619	79411933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79400842_79407011_79407113_79409004_79409164_79409867_79410121_79411272
ENSMUSG00000010911.13_0	chr2	+	899	7	FSM	ENSMUSG00000010911.13	ENSMUST00000011055.7	919	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTTGGAAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	102904033	102922983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_102904187_102913299_102913401_102917457_102917507_102918905_102919024_102919747_102919884_102922093_102922262_102922809
ENSMUSG00000010914.11_0	chr2	-	2493	11	FSM	ENSMUSG00000010914.11	ENSMUST00000011058.9	2506	11	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTACTTTGATATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	102903851	102851425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102852615_102854509_102854575_102858620_102858780_102860622_102860682_102863507_102863656_102865559_102865735_102871387_102871487_102872538_102872739_102877065_102877167_102888841_102888923_102903634
ENSMUSG00000010936.12_0	chr8	+	3053	19	FSM	ENSMUSG00000010936.12	ENSMUST00000034190.11	3069	19	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTTAATCAAGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	111345237	111447021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111345626_111358661_111358813_111359080_111359249_111360084_111360148_111360917_111361026_111361703_111361814_111362008_111362116_111362966_111363102_111363512_111363666_111372389_111372451_111379863_111380009_111380243_111380310_111397657_111397815_111409123_111409257_111436949_111437125_111438224_111438344_111439379_111439460_111442058_111442210_111446438
ENSMUSG00000011096.18_0	chr7	+	1584	5	FSM	ENSMUSG00000011096.18	ENSMUST00000054343.15	1592	5	0	8	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGTTCGTGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44498647	44504837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44498773_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUSG00000011096.18_2	chr7	+	1742	5	FSM	ENSMUSG00000011096.18	ENSMUST00000107880.9	1757	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCGTGTTGTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44499441	44504841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44499721_44501994_44502384_44503203_44503282_44503362_44503533_44504015
ENSMUSG00000011114.19_0	chr9	-	1967	9	FSM	ENSMUSG00000011114.19	ENSMUST00000117654.3	1984	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATACTTGATTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	37568597	37560064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37560800_37561326_37561470_37562244_37562356_37562585_37562684_37563910_37564058_37564328_37564466_37565511_37565733_37566317_37566389_37568293
ENSMUSG00000011148.15_0	chr12	+	1764	13	FSM	ENSMUSG00000011148.15	ENSMUST00000021726.8	1777	13	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCCACCGAGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	112586487	112607769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112586745_112594734_112594838_112598687_112598751_112599128_112599180_112599502_112599570_112600577_112600686_112600813_112600896_112601034_112601162_112601864_112602020_112602827_112602953_112604618_112604717_112606045_112606196_112607391
ENSMUSG00000011158.9_0	chr12	-	2595	18	NNC	ENSMUSG00000011158.9	novel	2615	18	NA	NA	9	-11	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGGGAAACTAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112964315	112923715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_112923979_112924729_112924902_112925342_112925395_112925995_112926253_112926996_112927053_112927129_112927212_112927803_112927866_112929348_112929613_112932884_112932978_112933061_112933102_112933716_112933844_112935881_112935976_112937091_112937242_112943304_112943378_112946646_112946679_112951538_112951713_112956683_112956765_112963792
ENSMUSG00000011179.9_0	chr12	+	2193	12	FSM	ENSMUSG00000011179.9	ENSMUST00000171737.3	2208	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGCATCAGGGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	17594802	17601078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17595170_17597096_17597195_17597283_17597402_17597633_17597808_17597950_17598124_17598309_17598445_17598545_17598628_17598787_17598872_17599424_17599588_17599668_17599782_17599863_17600079_17600607
ENSMUSG00000011254.17_0	chr11	-	2234	6	FSM	ENSMUSG00000011254.17	ENSMUST00000011398.13	2250	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATTGGTTCCTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	45846311	45837675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_45839156_45841022_45841131_45842369_45842459_45843561_45843732_45844882_45845060_45846101
ENSMUSG00000011256.17_0	chr11	+	6367	23	FSM	ENSMUSG00000011256.17	ENSMUST00000011400.8	6383	23	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAATGTTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45946825	46038161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_45947038_45951749_45951836_45955838_45955910_45984689_45984769_45990679_45990757_46003583_46003777_46004449_46004516_46009246_46009319_46012246_46012414_46013919_46014005_46015834_46015975_46018072_46018251_46019612_46019703_46022449_46022646_46025254_46025364_46027074_46027289_46028190_46028269_46028366_46028476_46029663_46029803_46030519_46030605_46030832_46031058_46033745_46033899_46034618
ENSMUSG00000011257.20_0	chr4	+	3105	14	FSM	ENSMUSG00000011257.20	ENSMUST00000106243.8	3111	14	6	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGACAGGGTTTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123176623	123192718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011257.20_1	chr4	+	3040	15	FSM	ENSMUSG00000011257.20	ENSMUST00000106241.8	3050	15	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	123176632	123192623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011257.20_11	chr4	+	2043	14	ISM	ENSMUSG00000011257.20	ENST00000678625.1	2083	15	2907	5	2907	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAGACTTAAGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	123180479	123192568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188859_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011257.20_5	chr4	+	3001	15	FSM	ENSMUSG00000011257.20	ENSMUST00000080178.13	3019	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTGAATTTGATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	123176712	123192616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011257.20_8	chr4	+	2666	14	FSM	ENSMUSG00000011257.20	ENSMUST00000078734.12	2700	14	32	2	32	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGCCAGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	123176919	123192623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188874_123188994_123189067_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011257.20_9	chr4	+	2074	15	FSM	ENSMUSG00000011257.20	ENST00000678625.1	2083	15	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTACCCAAGACTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	123177572	123192564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123177601_123180472_123180667_123182751_123182868_123183991_123184132_123184663_123184759_123185525_123185664_123186656_123186753_123188364_123188638_123188785_123188859_123188994_123189115_123189542_123189630_123189722_123189851_123191471_123191566_123191653_123191887_123192305
ENSMUSG00000011267.9_0	chr7	+	1516	3	FSM	ENSMUSG00000011267.9	ENSMUST00000108453.2	1530	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATGCCTGGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19311218	19314574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19311554_19311741_19311886_19313537
ENSMUSG00000011267.9_1	chr7	+	1070	2	ISM	ENSMUSG00000011267.9	ENST00000303809.7	1090	3	440	8	440	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGAGATGGCCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	19311745	19314467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_19311886_19313537
ENSMUSG00000011306.8_0	chr8	+	2660	14	FSM	ENSMUSG00000011306.8	ENSMUST00000011450.8	2681	14	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGTCTTGCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70495477	70524991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70495731_70501158_70501331_70505240_70505342_70509035_70509255_70511931_70512056_70512402_70512504_70513185_70513310_70517486_70517849_70522101_70522209_70522645_70522824_70522980_70523088_70523763_70523910_70524171_70524302_70524455
ENSMUSG00000011349.6_0	chr7	+	1537	8	FSM	ENSMUSG00000011349.6	ENST00000269945.8	1558	8	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGACTGTCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24571912	24577123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24572131_24572204_24572360_24573346_24573424_24573625_24573804_24574331_24574459_24575172_24575234_24575373_24575549_24576577
ENSMUSG00000011382.9_0	chr7	-	722	5	FSM	ENSMUSG00000011382.9	ENST00000522614.5	730	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGCTCCTGCGACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45138181	45124690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45124800_45131212_45131466_45136164_45136329_45137483_45137596_45138097
ENSMUSG00000011382.9_1	chr7	-	640	4	ISM	ENSMUSG00000011382.9	ENST00000522614.5	730	5	590	2	590	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGCTCCTGCGACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45137597	45124690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45124800_45131212_45131466_45136164_45136329_45137483
ENSMUSG00000011382.9_2	chr7	-	576	5	FSM	ENSMUSG00000011382.9	ENST00000523250.5	586	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATACAGCTCCTGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	45138182	45124693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45124800_45125028_45125177_45128432_45128558_45137483_45137596_45138097
ENSMUSG00000011382.9_4	chr7	-	486	4	ISM	ENSMUSG00000011382.9	ENST00000523250.5	586	5	593	9	593	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCTGATACAGCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	45137594	45124697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45124800_45125028_45125177_45128432_45128558_45137483
ENSMUSG00000011427.17_0	chr7	+	3336	5	FSM	ENSMUSG00000011427.17	ENSMUST00000178162.3	3356	5	12	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAACTCATTGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	29515550	29530422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29515715_29522494_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUSG00000011427.17_1	chr7	+	3367	5	FSM	ENSMUSG00000011427.17	ENSMUST00000032796.14	3376	5	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTTACACTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	29515548	29530361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29515715_29522404_29522570_29524254_29524379_29525116_29525213_29527545
ENSMUSG00000011589.10_0	chr17	+	1722	13	FSM	ENSMUSG00000011589.10	ENSMUST00000011733.9	1748	13	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACACTGGTCTCCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56293524	56303869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56293654_56294742_56294839_56295123_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303324_56303420_56303510_56303641
ENSMUSG00000011589.10_1	chr17	+	1356	11	FSM	ENSMUSG00000011589.10	ENST00000597590.5	1374	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTCAGGGTTCCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	56295132	56303828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56295256_56295673_56295776_56297211_56297235_56297418_56297541_56298166_56298377_56300842_56300942_56302356_56302517_56302857_56302938_56303071_56303233_56303420_56303510_56303641
ENSMUSG00000011658.17_0	chr7	+	1688	11	FSM	ENSMUSG00000011658.17	ENSMUST00000071207.14	1698	11	9	1	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGGGCTCTTTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44545511	44550047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44545787_44545970_44546093_44546338_44546424_44546684_44546754_44546943_44547049_44547926_44548125_44548199_44548296_44548408_44548516_44548597_44548663_44548735_44548811_44549556
ENSMUSG00000011658.17_3	chr7	+	454	4	FSM	ENSMUSG00000011658.17	ENST00000526575.1	469	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTCCAGAGGGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	44545622	44547021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44545787_44545970_44546093_44546684_44546754_44546922
ENSMUSG00000011751.17_0	chr7	-	8591	35	FSM	ENSMUSG00000011751.17	ENST00000392025.5	8596	35	4	1	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTTCGCTGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27141996	27055813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061823_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472_27132647_27133630_27133783_27141819
ENSMUSG00000011751.17_2	chr7	-	8856	36	FSM	ENSMUSG00000011751.17	ENST00000598249.6	8871	36	9	6	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTCTTCGCTGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27146142	27055813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27056876_27059167_27059211_27059359_27059534_27060991_27061285_27061823_27061894_27063495_27064116_27064988_27065186_27065832_27065918_27066024_27066164_27067024_27067270_27068613_27068995_27069826_27070032_27071298_27071430_27071521_27071801_27073570_27073661_27074797_27075023_27090857_27091122_27093582_27093730_27097375_27097467_27102160_27102364_27103592_27104344_27106535_27106674_27107667_27108602_27114082_27114234_27116129_27116433_27117382_27117542_27117795_27117914_27117989_27118178_27118412_27118526_27123133_27123250_27126250_27126332_27127608_27127701_27132472_27132647_27133630_27133783_27141819_27142007_27145887
ENSMUSG00000011752.8_0	chr19	+	1762	4	FSM	ENSMUSG00000011752.8	ENSMUST00000011896.8	1775	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTTACTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	41900370	41907095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41900626_41904043_41904319_41905081_41905263_41906044
ENSMUSG00000011831.17_0	chr5	-	5837	18	FSM	ENSMUSG00000011831.17	ENSMUST00000112642.8	5849	18	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATTTTATGTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	108022967	107892666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108022854
ENSMUSG00000011831.17_2	chr5	-	2807	18	ISM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	32751	0	32751	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATGTCTGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107990157	107895607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936
ENSMUSG00000011831.17_3	chr5	-	2870	19	FSM	ENSMUSG00000011831.17	ENST00000540033.2	2870	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCATGTCTGTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108022908	107895607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107896324_107912541_107912638_107936064_107936161_107938227_107938375_107943564_107943724_107945678_107945820_107946991_107947127_107958155_107958189_107960223_107960278_107961411_107961473_107963476_107963575_107963667_107963758_107964639_107964784_107966754_107966881_107967469_107967545_107968297_107968523_107969570_107969761_107989936_107990167_108022854
ENSMUSG00000011832.17_0	chr8	+	1524	11	FSM	ENSMUSG00000011832.17	ENSMUST00000239400.2	1542	11	12	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCACAGAGTGCTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	4216578	4243695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4243548
ENSMUSG00000011832.17_2	chr8	+	3920	20	FSM	ENSMUSG00000011832.17	ENSMUST00000176149.9	3938	20	15	3	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGATGCCGAATAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4216581	4258048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4251933_4251967_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ENSMUSG00000011832.17_5	chr8	+	3720	19	FSM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCCTAAGGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	4216738	4258038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4216764_4233487_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ENSMUSG00000011832.17_6	chr8	+	3680	18	ISM	ENSMUSG00000011832.17	ENSMUST00000176825.3	3728	19	16764	8	16764	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGTCCTAAGGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	4233502	4258038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_4233671_4235960_4236151_4237240_4237466_4237575_4237651_4238286_4238413_4241236_4241381_4241584_4241675_4243119_4243218_4243305_4243367_4250867_4250922_4252935_4253077_4253513_4253643_4255321_4255463_4255571_4255728_4255823_4255971_4256055_4256152_4256231_4256328_4256495
ENSMUSG00000011837.5_0	chr8	+	1519	5	FSM	ENSMUSG00000011837.5	ENSMUST00000011981.5	1536	5	12	5	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	949	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGCTGTGATTCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	4303091	4306215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4303305_4304281_4304402_4304550_4304620_4304991_4305374_4305480
ENSMUSG00000011877.14_0	chr11	+	2763	19	FSM	ENSMUSG00000011877.14	ENST00000579937.5	2781	19	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCATCCCTGCCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	77384204	77397660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397174
ENSMUSG00000011877.14_18	chr11	+	3503	20	FSM	ENSMUSG00000011877.14	ENSMUST00000037285.10	3512	20	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGGTTGGAGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	77384391	77398607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77384461_77389790_77389925_77390342_77390456_77390564_77390671_77391173_77391392_77391472_77391568_77391897_77391941_77393654_77393682_77393843_77393893_77394181_77394255_77394746_77394845_77395197_77395310_77395424_77395559_77395693_77396078_77396148_77396203_77396329_77396417_77396505_77396580_77396705_77396889_77397004_77397069_77397221
ENSMUSG00000011884.14_0	chr5	-	1744	5	FSM	ENSMUSG00000011884.14	ENSMUST00000012028.14	1762	5	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	2312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCATGTGTCTGTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	114829033	114807464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114808651_114812114_114812266_114814325_114814460_114815681_114815741_114828819
ENSMUSG00000011958.18_0	chr9	+	2452	11	FSM	ENSMUSG00000011958.18	ENSMUST00000034754.12	2464	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTTCTCTGGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	69896759	69915599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69911587_69911624_69914345
ENSMUSG00000011958.18_10	chr9	+	1268	9	FSM	ENSMUSG00000011958.18	ENSMUST00000165389.8	945	9	-41	-282	-41	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTCAGTAAAGTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	69902718	69914679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000011958.18_6	chr9	+	2318	10	FSM	ENSMUSG00000011958.18	ENSMUST00000085393.13	2328	10	10	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGGTCTTAATTACCT	NA	NA	NA	NA	NA	NA	NA	NA	69896795	69915537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69896972_69902702_69902810_69903399_69903468_69904362_69904540_69906375_69906553_69908124_69908228_69909261_69909394_69910660_69910748_69910850_69910950_69914345
ENSMUSG00000011960.13_0	chr15	-	7384	10	FSM	ENSMUSG00000011960.13	ENSMUST00000169707.8	7397	10	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACCTGATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98468804	98436582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356_98466165_98468751
ENSMUSG00000011960.13_1	chr15	-	7319	9	FSM	ENSMUSG00000011960.13	ENSMUST00000012104.7	2175	9	-635	-4509	-635	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACCTGATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98466152	98436582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98442490_98444404_98444476_98444625_98444790_98446546_98446593_98449794_98449858_98452481_98452543_98458077_98458207_98462927_98463010_98465356
ENSMUSG00000012017.5_0	chr16	+	3281	11	FSM	ENSMUSG00000012017.5	ENSMUST00000012161.5	3308	11	26	1	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCAGTGCTCTAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	17615171	17626156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17615392_17620230_17620290_17620379_17620482_17620643_17621164_17621245_17621465_17621600_17621730_17622169_17622274_17622349_17622468_17622672_17622789_17624212_17624366_17624615
ENSMUSG00000012076.9_0	chr12	+	2591	10	FSM	ENSMUSG00000012076.9	ENSMUST00000059250.8	2609	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTCATTTGTAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55883119	55916514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55883431_55888355_55888447_55891180_55891309_55892068_55892149_55906875_55906973_55907872_55907957_55908174_55908240_55909918_55909959_55912735_55912863_55914946
ENSMUSG00000012114.18_0	chr16	-	3081	17	FSM	ENSMUSG00000012114.18	ENSMUST00000232645.2	3105	17	17	7	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTTATTGCATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	17540747	17469078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17515940_17516057_17524262_17524348_17540619
ENSMUSG00000012114.18_10	chr16	-	3208	17	FSM	ENSMUSG00000012114.18	ENSMUST00000080936.14	3230	17	22	0	22	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAGGAGTTTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	17540739	17469084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUSG00000012114.18_12	chr16	-	2178	16	FSM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTTCCCATTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	17540686	17469848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUSG00000012114.18_13	chr16	-	2111	15	ISM	ENSMUSG00000012114.18	ENST00000382974.6	2183	16	25132	1	25132	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTTCCCATTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	17515558	17469848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17489408_17489538_17490932_17491263_17492268_17492523_17501022_17501053_17503316_17503369_17515470
ENSMUSG00000012114.18_2	chr16	-	3396	18	FSM	ENSMUSG00000012114.18	ENSMUST00000012259.9	3410	18	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTTATTGCATCTACC	NA	NA	NA	NA	NA	NA	NA	NA	17540801	17469078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17470128_17470572_17470672_17471054_17471222_17471308_17471470_17471788_17471856_17472877_17472942_17473010_17473146_17473307_17473436_17473541_17473670_17481240_17481361_17489408_17489538_17490932_17491263_17492268_17492523_17498412_17498626_17501022_17501053_17503316_17503369_17515470_17515559_17540619
ENSMUSG00000012117.14_0	chr4	-	3204	9	FSM	ENSMUSG00000012117.14	ENSMUST00000144668.8	3219	9	6	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGCAAACGAGAGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	133728195	133696347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUSG00000012117.14_3	chr4	-	3102	9	FSM	ENSMUSG00000012117.14	ENSMUST00000012262.12	3133	9	31	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACAAGGTTTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	133728167	133696367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727651_133728035
ENSMUSG00000012117.14_4	chr4	-	2033	9	FSM	ENSMUSG00000012117.14	ENSMUST00000105887.8	2038	9	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATACGAGGACTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	133728180	133697506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133698568_133707434_133707543_133710110_133710226_133718589_133718692_133719774_133719892_133721472_133721616_133724132_133724250_133727579_133727705_133728035
ENSMUSG00000012117.14_5	chr4	-	982	7	FSM	ENSMUSG00000012117.14	ENSMUST00000105886.8	1015	7	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTCTTTTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	133727671	133698259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133698565_133707434_133707543_133710110_133710226_133718589_133718692_133721472_133721616_133724132_133724250_133727579
ENSMUSG00000012126.17_1	chr4	+	1125	10	FSM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCTGCTGTCGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	133829915	133854020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133829960_133835562_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012126.17_3	chr4	+	1071	9	ISM	ENSMUSG00000012126.17	ENST00000314675.11	1132	10	5657	7	5657	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCCTGCTGTCGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	133835572	133854020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_133835667_133836846_133836970_133850702_133850915_133851152_133851231_133852144_133852266_133852376_133852481_133853517_133853592_133853676_133853818_133853896
ENSMUSG00000012296.17_0	chr17	-	2364	9	FSM	ENSMUSG00000012296.17	ENSMUST00000180283.2	2368	9	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAATCCCCTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46593948	46568776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593885
ENSMUSG00000012296.17_10	chr17	-	2492	10	ISM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	579	8	565	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGGCTTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46593360	46568807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271
ENSMUSG00000012296.17_14	chr17	-	2407	10	FSM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGGCTTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46593925	46568807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271_46593366_46593885
ENSMUSG00000012296.17_15	chr17	-	2359	9	ISM	ENSMUSG00000012296.17	ENSMUST00000225080.2	2412	10	567	6	567	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTAAGGCTTAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	46593358	46568808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46593271
ENSMUSG00000012296.17_4	chr17	-	2421	10	FSM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	0	5	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTTAATTTCTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	46593936	46568801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271_46593366_46593885
ENSMUSG00000012296.17_5	chr17	-	2364	9	ISM	ENSMUSG00000012296.17	ENSMUST00000012440.14	2426	10	575	7	564	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCTTAATTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46593361	46568803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574737_46575808_46575905_46593271
ENSMUSG00000012296.17_6	chr17	-	2551	11	FSM	ENSMUSG00000012296.17	ENSMUST00000164342.10	2559	11	0	8	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGGCTTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46593939	46568807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46572061_46572129_46572344_46572507_46573327_46573357_46574614_46574740_46575808_46575905_46582725_46582856_46593271_46593366_46593885
ENSMUSG00000012296.17_8	chr17	-	2180	8	FSM	ENSMUSG00000012296.17	ENSMUST00000225413.2	2189	8	1	8	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGGCTTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46574712	46568807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46570410_46570862_46570947_46571020_46571129_46571805_46571836_46572061_46572129_46572344_46572507_46573327_46573357_46574614
ENSMUSG00000012405.17_0	chr14	+	1903	4	FSM	ENSMUSG00000012405.17	ENSMUST00000080281.14	1922	4	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGGACCTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	4198636	4201862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4198738_4199235_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_12	chr14	+	865	4	FSM	ENSMUSG00000012405.17	ENSMUST00000079419.12	883	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCATTTCTGCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4198677	4200729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4198874_4199235_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_16	chr14	+	787	4	FSM	ENSMUSG00000012405.17	ENSMUST00000100799.9	802	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCATTTCTGCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4198733	4200729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4198852_4199235_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_18	chr14	+	1804	3	FSM	ENSMUSG00000012405.17	ENSMUST00000112598.9	802	3	164	-1166	-13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGTGGACCTATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	4199233	4201862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4199418_4199652_4199790_4200379
ENSMUSG00000012405.17_20	chr14	+	579	3	FSM	ENSMUSG00000012405.17	ENST00000439981.1	596	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGTTACCGCTAATACACG	NA	NA	NA	NA	NA	NA	NA	NA	4199257	4200671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4199408_4199652_4199790_4200379
ENSMUSG00000012422.15_0	chr13	+	8667	4	FSM	ENSMUSG00000012422.15	ENSMUST00000161568.8	8689	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAGACACAAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	90237254	90260367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_90237903_90246480_90246591_90249026_90249062_90252493
ENSMUSG00000012429.10_0	chr13	+	568	2	FSM	ENSMUSG00000012429.10	ENSMUST00000221480.2	582	2	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAACACAGTTTTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	17869779	17871830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_17869944_17871426
ENSMUSG00000012429.10_3	chr13	+	2652	2	FSM	ENSMUSG00000012429.10	ENSMUST00000049744.4	2672	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGAAAACAATTACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	17870007	17873680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_17870406_17871426
ENSMUSG00000012443.5_0	chr19	+	4803	22	FSM	ENSMUSG00000012443.5	ENSMUST00000012587.4	4819	22	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTTCGTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	37364859	37410300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37365116_37372687_37372821_37372989_37373088_37373179_37373259_37375464_37375651_37375758_37375884_37378759_37378851_37379096_37379340_37382132_37382229_37386566_37386656_37390652_37390741_37391908_37392098_37392561_37392770_37395441_37395615_37397923_37398050_37398173_37398333_37398974_37399082_37399778_37400059_37401568_37401792_37404937_37405081_37406348_37406466_37408706
ENSMUSG00000012483.5_0	chr6	-	649	4	FSM	ENSMUSG00000012483.5	ENSMUST00000012627.5	670	4	5	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAAAATATGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	8259168	8255951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999
ENSMUSG00000012483.5_1	chr6	-	615	5	FSM	ENSMUSG00000012483.5	ENST00000396682.6	626	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCTTCAGTTTCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	8259506	8256165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8256248_8256694_8256804_8257686_8257762_8258999_8259264_8259421
ENSMUSG00000012519.15_0	chr8	-	1954	11	FSM	ENSMUSG00000012519.15	ENSMUST00000120432.3	1976	11	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCACCAAACTTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	112064795	112038439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112038710_112041596_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059953_112060387_112064455
ENSMUSG00000012519.15_4	chr8	-	1325	9	FSM	ENSMUSG00000012519.15	ENST00000308807.12	1336	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTAGGAGTCTTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	112060344	112041599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112041738_112042124_112042175_112042994_112043147_112046009_112046086_112046348_112046485_112049334_112049433_112054446_112054631_112058448_112058523_112059927
ENSMUSG00000012535.15_0	chr6	-	4231	23	FSM	ENSMUSG00000012535.15	ENSMUST00000012679.15	4251	23	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTACCAGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29609873	29540832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012535.15_10	chr6	-	3661	23	FSM	ENSMUSG00000012535.15	ENST00000627585.2	3682	23	14	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACATGATAGACACACA	NA	NA	NA	NA	NA	NA	NA	NA	29609880	29541506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012535.15_21	chr6	-	3501	24	FSM	ENSMUSG00000012535.15	ENST00000482320.5	3537	24	10	26	10	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAGTTAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29609747	29541595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29541866_29543261_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29568993_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29599538_29599698_29609364
ENSMUSG00000012535.15_30	chr6	-	3005	22	FSM	ENSMUSG00000012535.15	ENST00000471166.1	3021	22	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGGTGAGTTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	29609589	29543267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29543360_29551850_29551964_29554793_29554962_29555151_29555309_29556976_29557072_29558750_29558868_29560080_29560222_29561358_29561420_29562856_29562934_29565169_29565262_29565662_29565855_29568852_29569090_29571034_29571127_29572584_29572693_29575004_29575152_29578461_29578601_29579519_29579696_29582164_29582309_29586036_29586194_29588021_29588096_29589027_29589229_29609364
ENSMUSG00000012609.20_14	chr12	+	2378	15	FSM	ENSMUSG00000012609.20	ENST00000554510.5	2386	15	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTCATCTGTAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	85946170	86059634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421
ENSMUSG00000012609.20_2	chr12	+	5071	34	FSM	ENSMUSG00000012609.20	ENSMUST00000040179.14	5081	34	8	2	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCCTGTTTTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85871491	86100532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85959325_85959365_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986099_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86070993_86071117_86099916
ENSMUSG00000012609.20_5	chr12	+	1366	10	FSM	ENSMUSG00000012609.20	ENST00000286650.9	1380	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAACTATTTGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	85871759	85912722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85912295
ENSMUSG00000012609.20_8	chr12	+	4631	32	FSM	ENSMUSG00000012609.20	ENSMUST00000110224.8	4647	32	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTCTTTCCTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85871760	86100526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85871861_85873226_85873399_85878668_85878776_85890551_85890635_85892020_85892128_85896024_85896156_85904153_85904237_85910337_85910408_85911298_85911384_85923264_85923367_85925160_85925253_85926141_85926250_85935932_85936015_85937794_85937857_85938889_85938985_85945766_85945881_85946166_85946259_85955566_85955630_85964448_85964607_85965704_85966012_85969731_85969853_85972413_85972561_85973575_85973680_85976637_85976766_85979498_85979583_85980055_85980449_85986102_85986285_86003339_86003495_86042774_86042971_86059421_86059637_86067294_86067378_86099916
ENSMUSG00000012819.17_106	chr10	-	3447	25	FSM	ENSMUSG00000012819.17	ENST00000442677.4	3470	25	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAAATGAAGCACAC	NA	NA	NA	NA	NA	NA	NA	NA	60433525	60241635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60241873_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322764_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394
ENSMUSG00000012819.17_55	chr10	-	3949	28	FSM	ENSMUSG00000012819.17	ENST00000616684.4	3964	28	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGCGGGTCATCACGG	NA	NA	NA	NA	NA	NA	NA	NA	60433527	60220636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322764_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394
ENSMUSG00000012819.17_6	chr10	-	3778	22	FSM	ENSMUSG00000012819.17	ENST00000619887.4	3792	22	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTCTTCCCGACGC	NA	NA	NA	NA	NA	NA	NA	NA	60157307	60138899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60139480_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60157030
ENSMUSG00000012819.17_7	chr10	-	10673	68	FSM	ENSMUSG00000012819.17	ENST00000224721.12	10687	68	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTCTTCCCGACGC	NA	NA	NA	NA	NA	NA	NA	NA	60523026	60138899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60139480_60140202_60140308_60140603_60140727_60140836_60140967_60141356_60141418_60141509_60141551_60141718_60141799_60141887_60142009_60143242_60143341_60143624_60143882_60146455_60146618_60146694_60146947_60147038_60147169_60148048_60148163_60148301_60148494_60149971_60150184_60150314_60150493_60151401_60151522_60152381_60152520_60152797_60152968_60153534_60153760_60155345_60155463_60159067_60159527_60160711_60160916_60161801_60161928_60163149_60163253_60165584_60165693_60166932_60167143_60167486_60167621_60171812_60171994_60172996_60173117_60173419_60173642_60212567_60212796_60213472_60213602_60214525_60214655_60214975_60215126_60218432_60218535_60220638_60221028_60222706_60222843_60227500_60227650_60228750_60228812_60242063_60242213_60243153_60243268_60244793_60244947_60246483_60246704_60248841_60248988_60249320_60249511_60255483_60255592_60256824_60256938_60262386_60262504_60264087_60264161_60269532_60269661_60270285_60270392_60272421_60272660_60274574_60274640_60301223_60301383_60301781_60301932_60322764_60322958_60324313_60324427_60359264_60359344_60366725_60366855_60370169_60370365_60432493_60432587_60432713_60432762_60433394_60433538_60485868_60485947_60493045_60493118_60522671
ENSMUSG00000012848.16_0	chr7	+	774	6	FSM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	11	9	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTATACCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12656227	12660603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12656350_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_1	chr7	+	744	6	FSM	ENSMUSG00000012848.16	ENSMUST00000004554.14	761	6	7	10	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTATACCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12656223	12660603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12656316_12656899_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_4	chr7	+	771	6	FSM	ENSMUSG00000012848.16	ENST00000598495.5	773	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTATACCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12656246	12660603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12656316_12656899_12657009_12659268_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012848.16_8	chr7	+	655	5	ISM	ENSMUSG00000012848.16	ENSMUST00000108539.8	794	6	680	9	652	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTATACCTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12656896	12660603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_12657009_12659318_12659529_12659663_12659793_12660322_12660422_12660498
ENSMUSG00000012889.9_0	chr8	+	2076	10	FSM	ENSMUSG00000012889.9	ENSMUST00000093380.5	2090	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGGACTCAGTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	84852626	84859151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84852731_84852834_84853057_84853856_84853951_84854226_84854292_84854413_84854524_84855198_84855356_84855892_84856009_84857159_84857818_84858526_84858676_84858750
ENSMUSG00000012889.9_5	chr8	+	1129	5	FSM	ENSMUSG00000012889.9	ENST00000254320.7	1144	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAGGGGGTTAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	84853860	84857815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84853951_84854413_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000012889.9_6	chr8	+	1045	4	ISM	ENSMUSG00000012889.9	ENST00000254320.7	1144	5	559	3	559	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGTTAACTACAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	84854412	84857820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_84854524_84855198_84855356_84855892_84856009_84857159
ENSMUSG00000013033.17_0	chr8	+	8161	23	FSM	ENSMUSG00000013033.17	ENSMUST00000141158.8	8181	23	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAGAGTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	84626745	84668575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ENSMUSG00000013033.17_4	chr8	+	5605	24	FSM	ENSMUSG00000013033.17	ENSMUST00000045393.15	5643	24	6	32	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84627349	84666608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84652890_84652906_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84663955_84664089_84664187_84664277_84664407_84664544_84664563_84664978
ENSMUSG00000013033.17_6	chr8	+	5710	23	FSM	ENSMUSG00000013033.17	ENSMUST00000152978.8	5734	23	3	21	3	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATGGAAAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84627366	84666595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84627554_84642035_84642198_84645448_84645663_84649627_84649738_84652890_84652906_84656092_84656894_84657590_84657906_84658241_84658346_84658596_84658783_84659000_84659040_84659136_84659321_84659468_84659592_84660054_84660270_84660505_84660677_84661055_84661266_84661346_84661568_84661692_84661760_84662170_84662263_84662648_84662818_84663825_84664187_84664277_84664407_84664544_84664563_84664978
ENSMUSG00000013076.18_0	chr9	-	8938	13	FSM	ENSMUSG00000013076.18	ENSMUST00000013220.8	8957	13	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGCAAATTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	14526294	14453272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14459195_14459826_14460103_14461687_14461918_14462917_14463044_14466869_14467061_14469754_14469905_14473370_14473517_14482918_14483009_14483970_14484116_14486446_14486736_14504049_14505008_14507746_14507897_14526029
ENSMUSG00000013089.16_0	chr16	-	3961	13	FSM	ENSMUSG00000013089.16	ENSMUST00000079601.13	3975	13	9	5	9	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCATTCCTGCAACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	22258460	22200063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22202442_22205506_22205609_22211404_22211575_22211736_22211806_22218069_22218130_22220421_22220682_22230382_22230671_22231594_22231725_22254626_22254678_22254769_22254818_22254950_22255039_22255187_22255311_22258266
ENSMUSG00000013150.16_0	chr8	-	4329	3	FSM	ENSMUSG00000013150.16	ENSMUST00000013294.16	4352	3	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAAATTTCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	106485285	106440497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106444283_106454619_106454964_106485085
ENSMUSG00000013155.11_0	chr8	-	1263	7	FSM	ENSMUSG00000013155.11	ENSMUST00000013299.11	1275	7	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGGCTGTGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106434558	106430288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106430654_106430744_106430882_106430982_106431147_106431266_106431393_106433197_106433371_106434180_106434376_106434455
ENSMUSG00000013155.11_2	chr8	-	1076	6	FSM	ENSMUSG00000013155.11	ENST00000602644.5	1087	6	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCCAACTTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106434572	106430325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106430654_106430744_106430882_106431266_106431393_106433197_106433371_106434180_106434376_106434455
ENSMUSG00000013158.7_0	chr8	+	824	3	FSM	ENSMUSG00000013158.7	ENST00000403458.9	841	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGACCATCTAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	106435456	106436721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106435646_106435983_106436217_106436319
ENSMUSG00000013160.8_0	chr8	-	1616	8	FSM	ENSMUSG00000013160.8	ENSMUST00000013304.8	1629	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCCTGCTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	106292671	106251101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106251697_106251788_106251867_106251954_106252132_106252255_106252334_106255805_106255886_106257446_106257626_106265952_106266125_106292414
ENSMUSG00000013236.18_0	chr17	-	5485	27	ISM	ENSMUSG00000013236.18	ENSMUST00000223859.2	5588	28	18059	6	3836	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56765380	56719431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191
ENSMUSG00000013236.18_1	chr17	-	5568	28	FSM	ENSMUSG00000013236.18	ENSMUST00000223859.2	5588	28	14	6	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56783425	56719431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ENSMUSG00000013236.18_2	chr17	-	5590	29	FSM	ENSMUSG00000013236.18	ENSMUST00000086828.10	5608	29	17	1	17	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56769199	56719431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ENSMUSG00000013236.18_3	chr17	-	5592	28	NIC	ENSMUSG00000013236.18	novel	5608	29	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGTGCATGGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	56769213	56719431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56769103
ENSMUSG00000013236.18_8	chr17	-	6843	33	FSM	ENSMUSG00000013236.18	ENSMUST00000067538.6	6855	33	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTAGTGCATGGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	56783471	56719432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56720394_56720728_56720865_56720950_56721106_56721682_56721809_56721884_56722012_56723880_56724060_56724225_56724512_56724590_56724746_56725710_56725831_56725909_56726086_56726403_56726528_56726622_56726721_56728239_56728353_56728832_56728845_56729128_56729287_56730182_56730399_56730493_56730588_56731024_56731279_56731879_56731978_56732326_56732927_56733386_56733505_56734938_56735133_56735851_56736158_56741452_56741598_56741880_56742015_56742609_56743192_56744785_56745056_56754359_56754471_56758651_56758841_56761186_56761329_56761873_56762020_56765191_56765378_56783339
ENSMUSG00000013275.10_0	chr1	+	4683	11	FSM	ENSMUSG00000013275.10	ENSMUST00000086559.7	4697	11	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAATGGCTTGTATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	131755720	131776595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131756132_131757748_131758729_131766852_131766961_131767914_131767987_131768592_131768738_131768865_131769013_131769722_131769871_131770686_131770767_131771656_131771792_131772075_131772225_131774287
ENSMUSG00000013338.17_0	chr2	-	3272	26	FSM	ENSMUSG00000013338.17	ENST00000430275.6	3276	26	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGTGTGGAGTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	155894918	155876922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155877005_155877095_155877213_155877799_155877935_155878520_155878675_155879268_155879422_155880984_155881102_155881189_155881278_155885939_155886041_155886361_155886483_155886574_155886753_155886935_155887045_155887328_155887700_155887988_155888176_155888863_155889048_155889160_155889321_155889524_155889610_155889786_155889850_155890107_155890240_155890348_155890410_155890793_155890959_155891354_155891397_155891544_155891637_155893895_155893996_155894077_155894167_155894480_155894537_155894788
ENSMUSG00000013415.10_0	chr11	-	8359	15	FSM	ENSMUSG00000013415.10	ENSMUST00000013559.3	8378	15	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATATTGAAAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	95896760	95848001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95854419_95857002_95857117_95857476_95857609_95858374_95858450_95859188_95859309_95859624_95859748_95860674_95860811_95861494_95861618_95863870_95864006_95864764_95865047_95866085_95866150_95870107_95870160_95870446_95870496_95895048_95895110_95896284
ENSMUSG00000013419.8_0	chr9	+	6327	6	FSM	ENSMUSG00000013419.8	ENSMUST00000093772.4	6353	6	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTACTCGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	121589116	121600800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121589292_121591684_121593188_121594548_121594697_121595532_121595649_121596304_121596450_121596560
ENSMUSG00000013465.20_0	chr2	-	2617	13	FSM	ENSMUSG00000013465.20	ENSMUST00000059849.15	2637	13	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATCCATGGTGAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	25101490	25089732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25090479_25090670_25090780_25091056_25091199_25093152_25093260_25093359_25093503_25093898_25093995_25094209_25094313_25095138_25095252_25096171_25096358_25099865_25100097_25100449_25100550_25100720_25100885_25101113
ENSMUSG00000013483.15_0	chr11	+	3026	19	FSM	ENSMUSG00000013483.15	ENST00000344227.6	3037	19	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACAACCCCACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119207948	119235621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119208143_119212648_119212787_119213403_119213730_119214956_119215125_119216263_119216384_119216880_119217007_119217457_119217608_119219301_119219419_119222062_119222206_119224294_119224434_119224623_119224817_119228517_119228645_119229060_119229299_119229697_119229762_119230400_119230513_119231816_119231991_119233968_119234091_119234720_119234837_119235362
ENSMUSG00000013495.16_0	chr5	+	1665	8	FSM	ENSMUSG00000013495.16	ENSMUST00000146207.6	1686	8	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCATAAAAGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108777650	108791890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904
ENSMUSG00000013495.16_1	chr5	+	3954	11	FSM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTAGCCTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108777699	108796648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108777767_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013495.16_4	chr5	+	2361	11	FSM	ENSMUSG00000013495.16	ENSMUST00000078323.13	2374	11	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAAAGAATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108777867	108795116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108777910_108786138_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013495.16_5	chr5	+	1808	11	FSM	ENSMUSG00000013495.16	ENSMUST00000120327.3	1811	11	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTTGCAGTGAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108777874	108794534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108777910_108786102_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013495.16_7	chr5	+	3873	10	ISM	ENSMUSG00000013495.16	ENSMUST00000063272.13	3956	11	8419	0	8242	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTAGCCTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108786116	108796648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_108786357_108786532_108786572_108787337_108787436_108789687_108789740_108789982_108790019_108790561_108790646_108790904_108791070_108792033_108792113_108792422_108792559_108793704
ENSMUSG00000013539.15_0	chr16	-	1605	9	FSM	ENSMUSG00000013539.15	ENSMUST00000115628.10	1622	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTAATGAGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	18161896	18118697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18128732_18128848_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013539.15_4	chr16	-	516	5	ISM	ENSMUSG00000013539.15	ENST00000420290.6	572	6	19494	6	16	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCCAGGTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18142303	18119297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_18119417_18120549_18120655_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_5	chr16	-	672	6	FSM	ENSMUSG00000013539.15	ENST00000401886.5	692	6	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCCAGGTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18142305	18119297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_7	chr16	-	566	6	FSM	ENSMUSG00000013539.15	ENST00000420290.6	572	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCCAGGTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18161797	18119297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18119417_18120549_18120655_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013539.15_8	chr16	-	742	7	ISM	ENSMUSG00000013539.15	ENST00000432883.5	797	8	19493	6	15	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCCAGGTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18142304	18119297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18130502_18130623_18134509_18134599_18142220
ENSMUSG00000013539.15_9	chr16	-	791	8	FSM	ENSMUSG00000013539.15	ENST00000432883.5	797	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTGCCAGGTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	18161797	18119297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18119417_18120549_18120655_18121546_18121701_18125833_18125905_18130502_18130623_18134509_18134599_18142220_18142315_18161758
ENSMUSG00000013593.13_0	chr1	-	1605	13	FSM	ENSMUSG00000013593.13	ENSMUST00000013737.13	1623	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	171074680	171062428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUSG00000013593.13_14	chr1	-	1962	12	FSM	ENSMUSG00000013593.13	ENST00000679176.1	1978	12	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCCACCTTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	171074875	171062451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066083_171066162_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUSG00000013593.13_4	chr1	-	1524	12	FSM	ENSMUSG00000013593.13	ENSMUST00000111318.8	1545	12	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAGCTTGTAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	171074677	171062428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171062657_171062841_171062900_171063925_171064010_171064174_171064271_171064708_171064839_171065513_171065634_171065855_171065942_171066278_171066467_171066842_171066964_171068515_171068707_171073659_171073767_171074562
ENSMUSG00000013622.16_0	chr5	+	951	7	FSM	ENSMUSG00000013622.16	ENSMUST00000013766.13	966	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAATGCTGCCGTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	31205987	31211961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31206101_31206805_31206925_31209540_31209613_31209805_31209878_31210106_31210229_31211304_31211403_31211606
ENSMUSG00000013629.17_0	chr5	+	7111	44	FSM	ENSMUSG00000013629.17	ENSMUST00000013773.12	7137	44	18	8	-13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCCTGGTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	31212141	31235815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234017_31234231_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ENSMUSG00000013629.17_8	chr5	+	6517	43	FSM	ENSMUSG00000013629.17	ENSMUST00000201182.4	6529	43	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCTGGGCAAGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	31212278	31235571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31212381_31212586_31212727_31215412_31215543_31216020_31216164_31216324_31216467_31216776_31216949_31217122_31217309_31217442_31217556_31217824_31217971_31218171_31218304_31218460_31218695_31218800_31219023_31219121_31219311_31219544_31219670_31219805_31219937_31224031_31224145_31224324_31224570_31224743_31224991_31225449_31225549_31225706_31225932_31226017_31226201_31226358_31226578_31226862_31227031_31227638_31227822_31227911_31228017_31229208_31229449_31229645_31229728_31229900_31230068_31230161_31230327_31230485_31230618_31230834_31231037_31231341_31231533_31231613_31231755_31231937_31232040_31232432_31232530_31233152_31233198_31233298_31233469_31233561_31233637_31234436_31234563_31234694_31234851_31234938_31235041_31235232_31235328_31235436
ENSMUSG00000013646.18_0	chr11	+	3007	7	FSM	ENSMUSG00000013646.18	ENSMUST00000116376.9	3016	7	1	8	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58221550	58238546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58221629_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013646.18_1	chr11	+	2968	7	FSM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAACAGTGATGTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	58221575	58238542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58221619_58222079_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013646.18_2	chr11	+	2925	6	ISM	ENSMUSG00000013646.18	ENSMUST00000073128.7	2977	7	508	5	508	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTGATGTTTACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58222083	58238546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_58222690_58228562_58228626_58228774_58228904_58232111_58232274_58236137_58236312_58236755
ENSMUSG00000013662.7_0	chr19	-	3757	10	FSM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTACATTTTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	32689728	32649048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689665
ENSMUSG00000013662.7_1	chr19	-	3690	9	ISM	ENSMUSG00000013662.7	ENSMUST00000235412.2	3771	10	5326	11	5122	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATTACATTTTTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	32684405	32649048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234
ENSMUSG00000013662.7_12	chr19	-	3149	10	FSM	ENSMUSG00000013662.7	ENST00000308448.11	3161	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATGTGGTTGGCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	32689521	32649787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32689327
ENSMUSG00000013662.7_17	chr19	-	2657	10	FSM	ENSMUSG00000013662.7	ENSMUST00000070210.6	2666	10	8	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTTTTCCCCACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	32717178	32650222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32651765_32654116_32654251_32661401_32661453_32664632_32664723_32673191_32673299_32675839_32676041_32678919_32679041_32679939_32680039_32684234_32684410_32717041
ENSMUSG00000013663.8_0	chr19	+	8278	9	FSM	ENSMUSG00000013663.8	ENSMUST00000013807.8	8292	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTTGCTTCTTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32734909	32803559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_32735924_32753414_32753500_32769948_32769994_32775470_32775515_32777260_32777500_32789095_32789238_32792816_32792984_32795235_32795461_32797242
ENSMUSG00000013698.13_0	chr1	-	2483	4	FSM	ENSMUSG00000013698.13	ENSMUST00000013842.12	2501	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTACCTGACTGATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	172034359	172024300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172026258_172026677_172026834_172027974_172028149_172034163
ENSMUSG00000013698.13_4	chr1	-	2420	4	FSM	ENSMUSG00000013698.13	ENSMUST00000111247.8	2435	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTACCTGACTGATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	172034362	172024300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172026258_172026677_172026834_172028040_172028149_172034163
ENSMUSG00000013701.14_0	chr14	-	1155	7	FSM	ENSMUSG00000013701.14	ENSMUST00000013845.13	1173	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAAAACATAGTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	31923846	31902127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31902628_31911100_31911212_31913298_31913358_31915359_31915445_31915810_31915905_31920925_31920985_31923599
ENSMUSG00000013736.17_1	chr6	+	2265	9	FSM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	106746134	106759425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_106746218_106746790_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013736.17_3	chr6	+	1357	7	ISM	ENSMUSG00000013736.17	ENSMUST00000113248.4	1398	9	671	2187	671	1786	internal_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCTGGTGTTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	106746797	106756428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146
ENSMUSG00000013736.17_4	chr6	+	2182	8	ISM	ENSMUSG00000013736.17	ENSMUST00000057578.16	2283	9	664	10	664	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCATTCTTTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	106746790	106759425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_106746965_106750245_106750440_106751366_106751506_106753079_106753207_106754878_106755073_106755748_106756003_106756146_106756429_106758607
ENSMUSG00000013787.16_0	chr17	+	3875	28	FSM	ENSMUSG00000013787.16	ENSMUST00000114033.9	3882	28	1	6	1	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	35117445	35133021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013787.16_10	chr17	+	3744	27	FSM	ENSMUSG00000013787.16	ENSMUST00000078061.13	3746	27	0	2	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	35117474	35133021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35117517_35118162_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013787.16_20	chr17	+	3853	26	FSM	ENSMUSG00000013787.16	ENSMUST00000097342.10	3934	26	81	0	64	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAAACTGTCTGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	35118010	35133020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013787.16_25	chr17	+	3997	27	FSM	ENSMUSG00000013787.16	ENSMUST00000013931.12	4026	27	23	6	23	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACTGTCTGGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	35117969	35133021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35118230_35118335_35118543_35118635_35118893_35121989_35122072_35122157_35122196_35122298_35122455_35124104_35124243_35124317_35124433_35124585_35124688_35124885_35125035_35125126_35125271_35125352_35125589_35125670_35125854_35125958_35126042_35126306_35126414_35126497_35126621_35126718_35126821_35127149_35127255_35127379_35127535_35127613_35127782_35129666_35129812_35129953_35130032_35130338_35130455_35130554_35130642_35131364_35131444_35131609_35131786_35132615
ENSMUSG00000013822.8_0	chr9	-	824	2	FSM	ENSMUSG00000013822.8	ENSMUST00000166335.2	1053	2	226	3	226	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGCCGCTGTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22025239	22024287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22024976_22025103
ENSMUSG00000013822.8_1	chr9	-	886	3	FSM	ENSMUSG00000013822.8	ENSMUST00000013966.8	888	3	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCGCCGCTGTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	22028467	22024287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22024976_22025103_22025240_22028405
ENSMUSG00000013833.16_1	chr10	-	3182	15	FSM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGGCTTTGGCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	79744745	79730546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743488_79744651
ENSMUSG00000013833.16_11	chr10	-	2928	15	FSM	ENSMUSG00000013833.16	ENSMUST00000165684.8	2950	15	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79744717	79730775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324_79743491_79744651
ENSMUSG00000013833.16_12	chr10	-	623	5	FSM	ENSMUSG00000013833.16	ENST00000269814.8	638	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCCACCAGCCTGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	79743457	79731114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79731260_79739195_79739263_79742598_79742769_79742872_79742981_79743324
ENSMUSG00000013833.16_2	chr10	-	3086	14	ISM	ENSMUSG00000013833.16	ENSMUST00000105378.9	3197	15	1266	9	-22	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTAGGCTTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79743489	79730550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_79731245_79731460_79731545_79732181_79732399_79732592_79732786_79733398_79733533_79734069_79734281_79734730_79734938_79735034_79735244_79735930_79736087_79738256_79738363_79738830_79739263_79742598_79742769_79742872_79742981_79743324
ENSMUSG00000013846.11_0	chr15	-	4972	6	FSM	ENSMUSG00000013846.11	ENSMUST00000092640.6	4985	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTGGGCGTGTTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	66985834	66974729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355
ENSMUSG00000013846.11_1	chr15	-	5710	9	FSM	ENSMUSG00000013846.11	ENSMUST00000229028.2	5732	9	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTGGGCGTGTTCGGA	NA	NA	NA	NA	NA	NA	NA	NA	67048663	66974729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67048480
ENSMUSG00000013846.11_2	chr15	-	2306	10	FSM	ENSMUSG00000013846.11	ENSMUST00000229213.2	2337	10	19	12	19	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTCAAAAGAGTGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	67048610	66978145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66978680_66980057_66980178_66981454_66981501_66983080_66983261_66984279_66984477_66985355_66986207_67000401_67000457_67024891_67025020_67034835_67034901_67048480
ENSMUSG00000013858.15_0	chr10	-	2208	11	FSM	ENSMUSG00000013858.15	ENSMUST00000052885.14	2225	11	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGCCGTGTAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	79820153	79812957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79813688_79813796_79813897_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUSG00000013858.15_2	chr10	-	1622	10	FSM	ENSMUSG00000013858.15	ENST00000333175.9	1641	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCCCCTAGTACCCCGG	NA	NA	NA	NA	NA	NA	NA	NA	79820044	79813334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79813688_79814021_79814155_79814225_79814310_79814381_79814440_79814526_79814628_79814701_79814825_79814931_79815043_79815124_79815225_79815329_79815588_79819743
ENSMUSG00000013878.19_0	chr8	+	3915	8	FSM	ENSMUSG00000013878.19	ENSMUST00000014022.15	3929	8	6	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAAAGTTTTTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	26609401	26633891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26609629_26610467_26610592_26613874_26614016_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUSG00000013878.19_1	chr8	+	999	7	FSM	ENSMUSG00000013878.19	ENSMUST00000153528.8	1026	7	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATATAAAATTAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26609425	26631140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26609629_26610467_26610592_26615931_26616008_26619074_26619184_26625656_26625731_26629007_26629119_26630838
ENSMUSG00000013921.16_0	chr7	+	3287	14	FSM	ENSMUSG00000013921.16	ENSMUST00000014065.16	3300	14	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTTCTTGTGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	29991184	30007786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29991268_29991566_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ENSMUSG00000013921.16_9	chr7	+	3206	13	ISM	ENSMUSG00000013921.16	ENSMUST00000014065.16	3300	14	387	6	387	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTTCTTGTGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	29991564	30007786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_29991792_29996272_29996413_29996497_29996592_29996779_29996942_29997344_29997464_29998236_29998474_30001270_30001407_30001560_30001690_30002794_30002939_30003032_30003157_30003336_30003402_30005183_30005257_30006230
ENSMUSG00000013973.13_0	chr1	+	2537	6	FSM	ENSMUSG00000013973.13	ENSMUST00000111300.8	2563	6	15	11	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATAAAATCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	171156727	171169888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171157095_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_4	chr1	+	1603	5	FSM	ENSMUSG00000013973.13	ENSMUST00000064950.11	1618	5	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAGAGAAGCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	171156990	171169250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171157095_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_6	chr1	+	2244	6	FSM	ENSMUSG00000013973.13	ENST00000458050.6	2259	6	4	11	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATAAAATCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	171157186	171169888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171157261_171158820_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_7	chr1	+	2172	5	ISM	ENSMUSG00000013973.13	ENST00000458050.6	2259	6	1636	11	-175	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATAAAATCCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	171158818	171169888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_171158854_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013973.13_8	chr1	+	1582	5	FSM	ENSMUSG00000013973.13	ENSMUST00000097467.8	1606	5	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGAAGGTGGGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171159011	171169178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171159167_171165819_171166209_171166390_171166499_171167760_171167908_171168395
ENSMUSG00000013997.11_5	chr1	-	3029	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111289.8	3041	7	5	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAATTCTGTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	171173209	171168145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173103
ENSMUSG00000013997.11_6	chr1	-	1234	6	ISM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	648	20	631	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	171172565	171169831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481
ENSMUSG00000013997.11_7	chr1	-	1685	6	FSM	ENSMUSG00000013997.11	ENST00000368007.8	1703	6	8	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGTGCGGTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	171173189	171169706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172779
ENSMUSG00000013997.11_8	chr1	-	1310	7	FSM	ENSMUSG00000013997.11	ENSMUST00000111295.8	1335	7	5	20	5	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATATAATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	171173208	171169831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171170366_171171005_171171132_171171261_171171396_171171631_171171736_171171855_171172108_171172481_171172569_171173135
ENSMUSG00000014030.16_0	chr4	-	1009	9	FSM	ENSMUSG00000014030.16	ENST00000522003.5	1014	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGAGCCACGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	44710408	44531506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44531583_44537419_44537507_44570001_44570104_44609714_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834_44692033_44710362
ENSMUSG00000014030.16_1	chr4	-	946	8	ISM	ENSMUSG00000014030.16	ENST00000522003.5	1014	9	18393	5	18393	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGAGCCACGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	44692015	44531506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_44531583_44537419_44537507_44570001_44570104_44609714_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834
ENSMUSG00000014030.16_4	chr4	-	683	5	ISM	ENSMUSG00000014030.16	ENST00000523145.5	745	6	18387	5	18387	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTGAGCATACCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	44692021	44609718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834
ENSMUSG00000014030.16_5	chr4	-	740	6	FSM	ENSMUSG00000014030.16	ENST00000523145.5	745	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTGAGCATACCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	44710408	44609718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44609845_44645547_44645724_44679439_44679569_44682668_44682734_44691834_44692033_44710362
ENSMUSG00000014074.18_0	chr16	+	4423	6	FSM	ENSMUSG00000014074.18	ENSMUST00000171474.2	4460	6	12	25	12	-25	multi-exon	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAATTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	32096290	32120227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32097234_32101128_32101206_32104187_32104368_32107936_32108059_32110720_32110800_32117205
ENSMUSG00000014075.16_1	chr16	+	826	5	FSM	ENSMUSG00000014075.16	ENSMUST00000014220.15	838	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATGAATAGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	32238530	32247916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32238746_32241637_32241772_32244058_32244129_32245675_32245740_32247573
ENSMUSG00000014075.16_4	chr16	+	703	4	FSM	ENSMUSG00000014075.16	ENSMUST00000080316.8	720	4	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCTTATGTCATGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	32238576	32247909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32238746_32241637_32241772_32245675_32245740_32247573
ENSMUSG00000014077.14_0	chr2	+	2587	7	FSM	ENSMUSG00000014077.14	ENSMUST00000014221.13	2609	7	10	12	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAAGAACTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	119378187	119417496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119378399_119391211_119391285_119397130_119397212_119402248_119402377_119411175_119411238_119415010_119415134_119415587
ENSMUSG00000014177.11_0	chr11	+	1767	7	FSM	ENSMUSG00000014177.11	ENSMUST00000014321.5	1784	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGCATTAGATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	62770290	62786004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62770422_62772762_62772846_62774452_62774598_62775901_62775992_62777014_62777147_62782767_62782897_62784947
ENSMUSG00000014195.17_0	chr11	-	2312	14	FSM	ENSMUSG00000014195.17	ENSMUST00000014339.15	2330	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCGTTCTTTGGTCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100510982	100473649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_10	chr11	-	1705	14	FSM	ENSMUSG00000014195.17	ENST00000674233.1	1716	14	7	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGGGAAGCAGGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	100510438	100473728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475361_100475525_100475807_100475882_100480723_100480816_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010_100490136_100492553_100492643_100510353
ENSMUSG00000014195.17_17	chr11	-	1379	11	FSM	ENSMUSG00000014195.17	ENST00000589576.6	1397	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAAGCCAGGGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100490127	100473745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100473963_100474419_100474483_100475036_100475190_100475377_100475525_100475807_100475863_100481712_100481878_100482237_100482392_100483680_100483800_100486991_100487067_100489440_100489555_100490010
ENSMUSG00000014226.11_0	chr1	-	2081	6	FSM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTCATAGAATTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	160040436	160029944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948_160036166_160040216
ENSMUSG00000014226.11_2	chr1	-	975	5	ISM	ENSMUSG00000014226.11	ENSMUST00000014370.11	2098	6	4291	883	8	-883	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGGGAGATAGAATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	160036154	160030819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_160031294_160032537_160032636_160033665_160033766_160034182_160034280_160035948
ENSMUSG00000014232.15_0	chr16	+	1755	12	FSM	ENSMUSG00000014232.15	ENSMUST00000040881.14	1779	12	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCATATAAGTCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	3726701	3759000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3758631
ENSMUSG00000014232.15_28	chr16	+	1358	12	ISM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	2352	4	2352	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACACCATCTGGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	3729323	3758871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3755717_3755775_3758631
ENSMUSG00000014232.15_6	chr16	+	1413	13	FSM	ENSMUSG00000014232.15	ENST00000341633.9	1417	13	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACACCATCTGGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	3726971	3758871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3727018_3729314_3729427_3731148_3731234_3733286_3733467_3735689_3735786_3737344_3737429_3741703_3741838_3746353_3746496_3747703_3747777_3751570_3751679_3755422_3755479_3755717_3755775_3758631
ENSMUSG00000014243.6_0	chr11	-	711	5	FSM	ENSMUSG00000014243.6	ENSMUST00000072916.5	732	5	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGCAATCAGATCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	62172188	62158057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62158433_62159529_62159635_62164537_62164641_62167443_62167466_62172082
ENSMUSG00000014243.6_2	chr11	-	196	2	FSM	ENSMUSG00000014243.6	ENST00000399277.6	209	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGTAGAAGTCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	62172162	62164542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62164659_62172082
ENSMUSG00000014243.6_3	chr11	-	116	1	NIC	ENSMUSG00000014243.6	novel	732	5	NA	NA	7510	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	207	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGTAGAAGTCTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	62164658	62164542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_62164500_62164700
ENSMUSG00000014245.9_0	chr11	+	2161	7	FSM	ENSMUSG00000014245.9	ENSMUST00000014389.6	2174	7	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCACGTTTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	62349290	62405235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62400645_62400678_62402963_62403098_62403729
ENSMUSG00000014245.9_5	chr11	+	735	6	NNC	ENSMUSG00000014245.9	novel	745	6	NA	NA	1	-10	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAGGGAGAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62349305	62403855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_62349521_62364193_62364295_62394504_62394596_62398552_62398621_62402963_62403098_62403729
ENSMUSG00000014245.9_6	chr11	+	705	6	FSM	ENSMUSG00000014245.9	ENST00000395844.8	745	6	30	10	30	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAGAGGGAGAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	62349334	62403855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62349521_62364194_62364295_62394504_62394596_62398552_62398621_62402963_62403098_62403729
ENSMUSG00000014294.5_0	chr18	-	561	3	FSM	ENSMUSG00000014294.5	ENSMUST00000014438.5	572	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4083	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGATGTCGTACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	36877600	36875385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36875712_36877233_36877341_36877472
ENSMUSG00000014301.14_0	chr16	-	575	5	FSM	ENSMUSG00000014301.14	ENSMUST00000014445.7	596	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCATATGTTCCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4442838	4434334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4434498_4434676_4434743_4434989_4435127_4435782_4435868_4442714
ENSMUSG00000014303.14_0	chr16	+	3608	7	FSM	ENSMUSG00000014303.14	ENSMUST00000014447.13	3619	7	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCCAGGGCTGGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	4412582	4433816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4412800_4426461_4426683_4428121_4428295_4429143_4429321_4429396_4429531_4429614_4429734_4431249
ENSMUSG00000014313.16_0	chr15	-	486	4	FSM	ENSMUSG00000014313.16	ENSMUST00000014457.15	503	4	10	7	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTAAGTCTTTGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	35938382	35932128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_35932244_35935430_35935560_35937300_35937431_35938270
ENSMUSG00000014329.15_0	chr10	-	5395	21	FSM	ENSMUSG00000014329.15	ENSMUST00000143791.8	5431	21	30	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGGGATATGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70995500	70758667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_70761209_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70995250
ENSMUSG00000014329.15_2	chr10	-	2909	20	ISM	ENSMUSG00000014329.15	ENSMUST00000131445.8	3005	22	118902	-4	118902	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	70863788	70760927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727
ENSMUSG00000014329.15_3	chr10	-	3001	22	FSM	ENSMUSG00000014329.15	ENSMUST00000131445.8	3005	22	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70982686	70760931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019_70915067_70982646
ENSMUSG00000014329.15_4	chr10	-	2961	21	ISM	ENSMUSG00000014329.15	ENSMUST00000131445.8	3005	22	67624	0	67624	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70915066	70760931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_70761209_70763544_70763625_70766420_70766521_70767914_70768076_70771661_70771819_70776315_70776471_70776829_70776870_70779199_70779366_70781054_70781212_70782374_70782508_70782634_70782832_70783601_70783764_70785768_70785956_70789224_70789357_70791953_70792206_70792851_70793047_70793490_70793545_70794603_70794763_70796964_70797045_70863727_70863798_70915019
ENSMUSG00000014349.8_0	chr11	-	3980	7	FSM	ENSMUSG00000014349.8	ENSMUST00000100528.5	3997	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAATAACTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	95956206	95938266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95941241_95942559_95942651_95946663_95946777_95949141_95949254_95951762_95951951_95953820_95953894_95955777
ENSMUSG00000014353.16_0	chr2	+	4784	19	FSM	ENSMUSG00000014353.16	ENSMUST00000110325.8	4807	19	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGAGATTGTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128660053	128696174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128681067_128681140_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ENSMUSG00000014353.16_17	chr2	+	2095	19	FSM	ENSMUSG00000014353.16	ENSMUST00000143398.3	2100	19	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAACCAGAGAGAGCTACA	NA	NA	NA	NA	NA	NA	NA	NA	128660227	128693659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128660424_128665002_128665064_128666335_128666431_128668176_128668309_128670325_128670377_128672429_128672521_128673117_128673180_128673369_128673554_128676034_128676135_128679221_128679316_128682651_128682724_128683154_128683264_128683344_128683404_128684515_128684620_128687380_128687455_128688648_128688720_128690924_128690978_128692223_128692255_128693203
ENSMUSG00000014355.11_0	chr2	-	8926	48	FSM	ENSMUSG00000014355.11	ENSMUST00000014499.10	8942	48	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTAAAGTTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	128529305	128452033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128454984_128457289_128457425_128459473_128459673_128461173_128461270_128461813_128461901_128464292_128464432_128465415_128465484_128465797_128465876_128466777_128466896_128469040_128469128_128470416_128470611_128471436_128471491_128471599_128471691_128472147_128472225_128474517_128474593_128475256_128475336_128476352_128476436_128476557_128476693_128479027_128479120_128483261_128483497_128484365_128484638_128487053_128487173_128490224_128490440_128492115_128492295_128494615_128494687_128494771_128494809_128495086_128495166_128499045_128499195_128500167_128500260_128501656_128501926_128502724_128502800_128505794_128505983_128507367_128507429_128508484_128508626_128510844_128510980_128511569_128511636_128511742_128511834_128513981_128514078_128516470_128516681_128517590_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522366_128526421_128526584_128527743_128527981_128529072
ENSMUSG00000014355.11_19	chr2	-	1260	9	FSM	ENSMUSG00000014355.11	ENST00000616781.4	1276	9	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGATGTCTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128527968	128517593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128517812_128518021_128518168_128520130_128520205_128521439_128521523_128522028_128522130_128522313_128522386_128524693_128524873_128526421_128526584_128527743
ENSMUSG00000014361.6_0	chr2	+	4297	19	FSM	ENSMUSG00000014361.6	ENSMUST00000014505.5	4302	19	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACCTTGCAGAACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	128540875	128644809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128541024_128571105_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613421_128618205_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128625811_128625931_128632136_128632247_128634865_128635026_128636361_128636499_128643073
ENSMUSG00000014361.6_2	chr2	+	2420	16	FSM	ENSMUSG00000014361.6	ENST00000616902.4	2438	16	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGCCTGAGGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	128571235	128636469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128571515_128578482_128578584_128580115_128580290_128592019_128592107_128593826_128593943_128600962_128601147_128603996_128604149_128613266_128613425_128618011_128618360_128619332_128619419_128620834_128620931_128621711_128621793_128624442_128624536_128632049_128632247_128634865_128635026_128636361
ENSMUSG00000014402.16_0	chr7	-	1931	10	FSM	ENSMUSG00000014402.16	ENSMUST00000014546.15	1949	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAGGAAGTACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	46569706	46538703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46539453_46540669_46540910_46542105_46542309_46550774_46550867_46553269_46553337_46556798_46556926_46558652_46558817_46560492_46560559_46563125_46563211_46569568
ENSMUSG00000014418.17_0	chr7	-	4406	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	8	8	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	46445415	46409897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440473_46445330
ENSMUSG00000014418.17_1	chr7	-	4921	23	FSM	ENSMUSG00000014418.17	ENSMUST00000014562.14	4953	23	24	8	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	46445427	46409897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ENSMUSG00000014418.17_2	chr7	-	4699	23	FSM	ENSMUSG00000014418.17	ENSMUST00000107653.8	4702	23	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	46445304	46409897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427525_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340_46440497_46444851
ENSMUSG00000014418.17_3	chr7	-	4322	22	ISM	ENSMUSG00000014418.17	ENSMUST00000107654.8	4422	23	4950	8	4832	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGAACATGGATATGAG	NA	NA	NA	NA	NA	NA	NA	NA	46440473	46409897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_46410875_46412366_46412638_46414242_46414350_46416517_46416632_46417456_46417577_46418360_46418517_46418716_46418838_46421030_46421606_46421895_46421968_46422543_46422694_46424237_46424362_46425188_46425376_46426299_46426459_46427444_46427624_46428495_46428585_46432566_46432639_46432894_46433108_46435933_46436068_46437596_46437790_46438351_46438417_46438512_46438624_46440340
ENSMUSG00000014426.10_0	chr17	-	5217	26	FSM	ENSMUSG00000014426.10	ENSMUST00000233755.2	5237	26	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	12537626	12446518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ENSMUSG00000014426.10_4	chr17	-	5413	27	FSM	ENSMUSG00000014426.10	ENSMUST00000089058.7	5441	27	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAGCGAAGTCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	12537666	12446518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_12447008_12448403_12448584_12451298_12451406_12451800_12451924_12453937_12454098_12454785_12454903_12455867_12455939_12456925_12457118_12458265_12458347_12458856_12458958_12461536_12461693_12462386_12462484_12466189_12466257_12466939_12467019_12467790_12467925_12468383_12468546_12472968_12473119_12473883_12474151_12475477_12475562_12475648_12475749_12476800_12476918_12479337_12479496_12480130_12480278_12482792_12483036_12489749_12491108_12496807_12496999_12537384
ENSMUSG00000014444.18_0	chr8	-	8201	51	FSM	ENSMUSG00000014444.18	ENSMUST00000156333.9	8219	51	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCAATCCTTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	123278059	123208445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229051_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ENSMUSG00000014444.18_1	chr8	-	8198	51	FSM	ENSMUSG00000014444.18	ENSMUST00000067252.14	8216	51	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCAATCCTTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	123278059	123208445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123208971_123209048_123209266_123209387_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224_123210414_123211467_123211616_123211700_123211860_123211995_123212211_123212328_123212477_123212562_123212696_123213045_123213359_123213493_123213683_123213748_123214008_123214213_123214421_123214576_123214684_123214813_123214987_123215072_123215130_123215199_123215294_123215837_123215939_123216293_123216366_123216801_123216903_123216977_123217068_123217593_123217766_123217857_123217955_123218053_123218298_123218397_123218552_123219345_123219451_123221528_123221734_123222155_123222357_123222472_123222599_123223141_123223319_123223478_123223640_123224190_123224304_123224544_123224728_123224889_123225039_123225131_123225311_123225398_123225511_123226366_123226625_123226942_123227044_123227900_123227989_123228068_123228156_123228244_123228417_123228504_123228719_123228860_123229048_123232767_123232907_123233004_123233048_123234361_123234485_123240452_123240549_123277713
ENSMUSG00000014444.18_10	chr8	-	1141	7	FSM	ENSMUSG00000014444.18	ENST00000327397.8	1154	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGGCTGGCAGAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	123210409	123208666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123208971_123209086_123209266_123209383_123209468_123209607_123209731_123209795_123209969_123210057_123210151_123210224
ENSMUSG00000014470.5_0	chr8	-	1765	6	FSM	ENSMUSG00000014470.5	ENSMUST00000014614.4	1783	6	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCACGCGAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	123202793	123192893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123193974_123194700_123194809_123194978_123195094_123195352_123195466_123196938_123197096_123202601
ENSMUSG00000014496.9_1	chr14	-	6167	29	FSM	ENSMUSG00000014496.9	ENST00000624145.3	6188	29	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAAAAATCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31503862	31420735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31422564_31422975_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31503659
ENSMUSG00000014496.9_2	chr14	-	7495	29	FSM	ENSMUSG00000014496.9	ENST00000683139.1	7519	29	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTAAAAAATCAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31503652	31420735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31422564_31422975_31424264_31427221_31427314_31428746_31428830_31429160_31429244_31429959_31430106_31430706_31430791_31430874_31430963_31432708_31432929_31433015_31433134_31433885_31433974_31437190_31437393_31441297_31441373_31442062_31442090_31443802_31443915_31449591_31449733_31451841_31451911_31453985_31454050_31455640_31455724_31456928_31457044_31458716_31458796_31465179_31465393_31467177_31467321_31468869_31468958_31470599_31470801_31477689_31477761_31486210_31486290_31500878_31500963_31502121
ENSMUSG00000014498.10_0	chr10	+	6596	28	FSM	ENSMUSG00000014498.10	ENSMUST00000014642.10	6620	28	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAACTCAACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	128212999	128229863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128213119_128213437_128213522_128213956_128214036_128214221_128214293_128215249_128215451_128216449_128216538_128216796_128216940_128217714_128217928_128218203_128218283_128218500_128218616_128218769_128218853_128218928_128219047_128219223_128219293_128219437_128219579_128219660_128219742_128221969_128222082_128222277_128222350_128222827_128223030_128223238_128223327_128223455_128223574_128224407_128224628_128224769_128224858_128224955_128225040_128225116_128225263_128225349_128225433_128225638_128225722_128225901_128225994_128226339
ENSMUSG00000014503.16_0	chr18	+	1975	10	FSM	ENSMUSG00000014503.16	ENST00000508638.5	1990	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTAAAACACTCAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34545742	34575835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34545868_34547515_34547773_34549880_34550103_34558068_34558298_34560369_34560541_34563735_34563838_34566341_34566407_34571092_34571268_34571783_34571886_34575308
ENSMUSG00000014504.17_0	chr18	+	859	5	FSM	ENSMUSG00000014504.17	ENSMUST00000072576.10	876	5	10	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGACTTTAGTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34464207	34469645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469151
ENSMUSG00000014504.17_13	chr18	+	469	3	ISM	ENSMUSG00000014504.17	ENST00000515463.1	525	4	3086	3	3086	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCTTTTATAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34467351	34469442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_34467418_34467509_34467622_34469151
ENSMUSG00000014504.17_5	chr18	+	522	4	FSM	ENSMUSG00000014504.17	ENST00000515463.1	525	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCTTTTATAACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34464265	34469442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34464313_34467345_34467418_34467509_34467622_34469151
ENSMUSG00000014504.17_6	chr18	+	848	5	FSM	ENSMUSG00000014504.17	ENST00000282999.7	854	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCACTTAGGAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	34464265	34469659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34464313_34464802_34464879_34467345_34467418_34467509_34467622_34469118
ENSMUSG00000014547.11_0	chr14	+	6630	12	FSM	ENSMUSG00000014547.11	ENSMUST00000014691.10	6646	12	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCTCAGTTGTATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	63075138	63198954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63075507_63123258_63123327_63137703_63137778_63162578_63162634_63167676_63167828_63171738_63171852_63181469_63181597_63186091_63186198_63189363_63189466_63190460_63190592_63192309_63192419_63193728
ENSMUSG00000014547.11_4	chr14	+	415	2	FSM	ENSMUSG00000014547.11	ENST00000612477.1	436	2	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATAACTTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	63075328	63076757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63075507_63076520
ENSMUSG00000014550.15_0	chr6	-	5328	12	FSM	ENSMUSG00000014550.15	ENSMUST00000014694.11	5334	12	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTGTGCTTAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	92191901	92163693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_92167440_92168229_92168335_92170109_92170213_92170924_92171012_92175164_92175236_92176674_92176917_92178452_92178615_92178712_92178759_92179550_92179652_92184025_92184167_92188568_92188883_92191691
ENSMUSG00000014551.9_0	chr6	-	6050	4	FSM	ENSMUSG00000014551.9	ENSMUST00000140438.2	6073	4	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATACATACATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92161002	92146516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_92152190_92152689_92152778_92155690_92155798_92160820
ENSMUSG00000014551.9_4	chr6	-	271	2	FSM	ENSMUSG00000014551.9	ENST00000444840.6	288	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAGTACTTAGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	92155789	92152017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_92152190_92155690
ENSMUSG00000014554.14_0	chr6	-	1095	7	FSM	ENSMUSG00000014554.14	ENSMUST00000014698.10	1107	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	83483941	83457200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83457419_83457824_83457925_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUSG00000014554.14_1	chr6	-	991	6	FSM	ENSMUSG00000014554.14	ENSMUST00000113888.3	1007	6	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGTTGTTCGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	83483937	83457200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83457419_83458328_83458445_83463965_83464114_83467402_83467591_83473667_83473781_83483729
ENSMUSG00000014554.14_2	chr6	-	624	4	FSM	ENSMUSG00000014554.14	ENST00000629438.2	644	4	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTACCAAGTAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83483912	83458339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83458445_83463965_83464114_83467402_83467591_83483729
ENSMUSG00000014592.22_0	chr4	-	8405	24	NNC	ENSMUSG00000014592.22	novel	8423	24	NA	NA	21	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATCTGTGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	151946182	151143982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_151147313_151155882_151155914_151158444_151158520_151159548_151159743_151161033_151161055_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151215998_151216134_151222770_151222898_151228172_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670942_151914873_151914994_151920270_151920341_151946081
ENSMUSG00000014592.22_2	chr4	-	8529	23	NNC	ENSMUSG00000014592.22	novel	8423	24	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATCTGTGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	151946327	151143982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_151147313_151155882_151155914_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151215998_151216134_151222770_151222898_151228172_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670942_151914873_151914994_151920270_151920341_151946081
ENSMUSG00000014592.22_8	chr4	-	8532	23	FSM	ENSMUSG00000014592.22	ENSMUST00000097774.9	8533	23	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATCTGTGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	151946333	151143982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_151147313_151155882_151155914_151158444_151158520_151159548_151159743_151162320_151162393_151163237_151163485_151164143_151164332_151168133_151168658_151169019_151169336_151170016_151170096_151170470_151170668_151173286_151173439_151215998_151216134_151222770_151222898_151228172_151230026_151232866_151233008_151248272_151248427_151374488_151374561_151537740_151537877_151670871_151670940_151914874_151914994_151920270_151920341_151946081
ENSMUSG00000014599.11_0	chr3	-	3044	9	FSM	ENSMUSG00000014599.11	ENSMUST00000118593.8	3058	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGGAAAACTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107667539	107648364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469_107655601_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ENSMUSG00000014599.11_1	chr3	-	4163	9	FSM	ENSMUSG00000014599.11	ENSMUST00000014743.10	4176	9	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATGGGAAAACTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107667773	107648364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107650462_107654041_107654101_107654422_107654476_107655469_107656486_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ENSMUSG00000014599.11_4	chr3	-	2091	9	FSM	ENSMUSG00000014599.11	ENSMUST00000120243.8	2097	9	6	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTGTCCAGTAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	107667552	107652910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107653157_107654041_107654101_107654422_107654476_107655469_107656486_107657626_107657775_107661047_107661219_107662746_107662810_107663932_107664056_107667340
ENSMUSG00000014601.14_0	chr3	-	3197	21	FSM	ENSMUSG00000014601.14	ENSMUST00000064759.7	3215	21	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGTCCGTGTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107539001	107519856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107520783_107521910_107522116_107522630_107522736_107523076_107523144_107523823_107523925_107524127_107524255_107525373_107525472_107525631_107525707_107526226_107526299_107527355_107527420_107527524_107527591_107528642_107528861_107529187_107529371_107531702_107531831_107531940_107532048_107532996_107533066_107534051_107534173_107534260_107534396_107534703_107534779_107535471_107535542_107538816
ENSMUSG00000014602.16_0	chr1	-	8200	48	FSM	ENSMUSG00000014602.16	ENSMUST00000171796.8	8206	48	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACACACATCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	93029544	92943191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92954553_92954578_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996283_93000029_93000048_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ENSMUSG00000014602.16_1	chr1	-	8134	47	ISM	ENSMUSG00000014602.16	ENSMUST00000171796.8	8206	48	19348	6	-53	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACACACATCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	93010196	92943191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92954553_92954578_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993768_92993912_92994777_92994857_92996206_92996283_93000029_93000048_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037
ENSMUSG00000014602.16_7	chr1	-	6112	49	FSM	ENSMUSG00000014602.16	ENSMUST00000190723.7	6141	49	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGACGTGAACAAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	93029650	92945667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92946222_92946673_92946793_92947528_92947722_92948179_92948333_92948934_92949060_92949447_92949526_92950042_92950244_92950647_92950794_92951180_92951243_92952300_92952435_92953342_92953458_92964567_92964674_92966756_92966842_92966938_92967006_92967466_92967576_92968340_92968397_92969295_92969415_92969806_92969898_92970064_92970234_92970337_92970477_92971310_92971397_92974373_92974493_92979124_92979404_92980145_92980284_92981981_92982161_92982537_92982687_92983406_92983501_92983678_92983752_92983821_92984003_92986535_92986620_92987918_92988026_92988459_92988540_92990221_92990298_92990588_92990669_92991870_92992005_92993273_92993301_92993768_92993912_92994777_92994857_92996206_92996283_93000029_93000048_93000760_93000827_93001529_93001608_93002677_93002790_93003872_93004052_93004763_93004830_93005409_93005590_93006482_93006560_93010037_93010203_93029484
ENSMUSG00000014606.15_0	chr11	-	1693	8	FSM	ENSMUSG00000014606.15	ENSMUST00000014750.15	1711	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATGCTGTGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	70537873	70535028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70536901_70537055_70537593
ENSMUSG00000014606.15_3	chr11	-	889	7	FSM	ENSMUSG00000014606.15	ENST00000544061.6	901	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGCATGGTCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	70537786	70535592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70535748_70535864_70535917_70535995_70536096_70536175_70536267_70536355_70536447_70536609_70536817_70537593
ENSMUSG00000014609.17_1	chr11	-	1639	12	FSM	ENSMUSG00000014609.17	ENST00000649488.2	1650	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATGAGGAATGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	70509706	70505032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70505255_70505802_70505955_70506033_70506141_70506225_70506413_70506486_70506602_70507780_70507896_70507972_70508174_70508430_70508532_70508980_70509137_70509235_70509346_70509450_70509496_70509578
ENSMUSG00000014633.16_0	chr8	-	1438	4	FSM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	9	12	-7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCTAATCAATTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117648185	117615435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117616599_117620826_117620899_117637866_117637974_117648089
ENSMUSG00000014633.16_1	chr8	-	1348	3	ISM	ENSMUSG00000014633.16	ENSMUST00000148235.8	1459	4	10220	7	10130	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCAATTCAGTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	117637974	117615430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_117616599_117620826_117620899_117637866
ENSMUSG00000014633.16_2	chr8	-	518	3	FSM	ENSMUSG00000014633.16	ENSMUST00000078589.7	523	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTCACTGGACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	117648178	117616276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117616599_117637866_117637974_117648089
ENSMUSG00000014668.16_1	chr5	+	3153	18	FSM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	6	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110283720	110319837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014668.16_12	chr5	+	3074	17	ISM	ENSMUSG00000014668.16	ENSMUST00000112519.9	3159	18	201	0	190	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTTGTACTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110283915	110319837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306664_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014668.16_13	chr5	+	3069	17	ISM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	193	0	193	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110283918	110319838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014668.16_8	chr5	+	3144	18	FSM	ENSMUSG00000014668.16	ENSMUST00000014812.13	3146	18	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTTGTACTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	110283727	110319838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110283801_110283916_110284061_110288219_110288320_110291416_110291527_110292456_110292517_110292637_110292854_110294335_110294501_110299392_110299553_110300201_110300357_110300983_110301147_110302702_110302849_110306667_110306785_110308023_110308108_110310576_110310648_110311871_110311960_110315989_110316098_110317007_110317081_110318727
ENSMUSG00000014748.14_0	chr6	-	2968	6	FSM	ENSMUSG00000014748.14	ENSMUST00000014892.8	2984	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1706	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTGAGCTGTAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83752784	83745871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83748286_83748428_83748532_83749223_83749292_83750691_83750846_83751999_83752080_83752635
ENSMUSG00000014763.9_0	chr17	+	4406	11	FSM	ENSMUSG00000014763.9	ENSMUST00000055352.8	4420	11	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCACAAGTTTAAATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	15616469	15653692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15616823_15622006_15623392_15626016_15626198_15627858_15627961_15634940_15635114_15637894_15637988_15643139_15643347_15644531_15644641_15646450_15646538_15651838_15651891_15652028
ENSMUSG00000014767.18_0	chr17	+	1869	9	FSM	ENSMUSG00000014767.18	ENSMUST00000014911.12	1891	9	16	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATTGTTTTGTTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15720165	15737683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15720287_15721415_15721465_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUSG00000014767.18_1	chr17	+	12777	8	FSM	ENSMUSG00000014767.18	ENSMUST00000162505.8	12794	8	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAGAGTTTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	15720158	15748633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUSG00000014767.18_4	chr17	+	1644	7	FSM	ENSMUSG00000014767.18	ENSMUST00000118001.8	1652	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATTGTTTTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	15720171	15737681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15720287_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15735877_15735973_15736965
ENSMUSG00000014767.18_5	chr17	+	2055	10	FSM	ENSMUSG00000014767.18	ENSMUST00000117593.8	2067	10	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCATTGTTTTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	15720225	15737681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15720489_15721415_15721465_15721573_15721620_15723226_15723391_15724535_15724910_15727604_15727693_15733791_15733884_15734491_15734660_15735877_15735973_15736965
ENSMUSG00000014769.11_0	chr17	-	1742	6	FSM	ENSMUSG00000014769.11	ENSMUST00000014913.11	1758	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCATAGTGGCTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	15718549	15695287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15696468_15697576_15697684_15710417_15710548_15713359_15713442_15714677_15714786_15718414
ENSMUSG00000014771.14_0	chr17	-	1091	6	FSM	ENSMUSG00000014771.14	ENSMUST00000054450.7	1120	6	13	16	-7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAAAACTTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	15747550	15741852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15742056_15742177_15742292_15743064_15743169_15745530_15745663_15746634_15746875_15747252
ENSMUSG00000014771.14_1	chr17	-	554	4	FSM	ENSMUSG00000014771.14	ENST00000443345.2	567	4	6	7	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTCTGTGCATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	15747531	15745528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15745663_15746634_15746875_15747252_15747347_15747445
ENSMUSG00000014771.14_2	chr17	-	468	3	ISM	ENSMUSG00000014771.14	ENST00000443345.2	567	4	191	7	189	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTCTGTGCATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	15747346	15745528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_15745663_15746634_15746875_15747252
ENSMUSG00000014771.14_3	chr17	-	639	3	FSM	ENSMUSG00000014771.14	ENST00000547904.1	651	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTCTGTGCATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	15747526	15745528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15745654_15746634_15746875_15747252
ENSMUSG00000014773.14_0	chr17	-	3565	11	FSM	ENSMUSG00000014773.14	ENSMUST00000014917.8	3581	11	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAACTACAACCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	15596234	15587627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15588298_15588395_15588514_15588628_15589428_15590468_15590686_15590792_15590963_15591084_15591216_15591867_15591929_15593698_15593957_15594151_15594213_15594927_15595222_15595448
ENSMUSG00000014776.8_0	chr8	+	3166	4	FSM	ENSMUSG00000014776.8	ENSMUST00000014920.8	3176	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGTCAAGAGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106002781	106008571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106003246_106005605_106005903_106006047_106006408_106006526
ENSMUSG00000014778.11_0	chr8	-	3910	22	FSM	ENSMUSG00000014778.11	ENSMUST00000014922.5	3928	22	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTATAAGAGCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106074574	106055801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106056112_106056200_106056402_106056478_106056642_106056726_106056920_106057018_106057210_106057760_106057923_106058001_106058122_106058273_106058457_106058668_106058825_106059541_106060237_106061318_106061435_106063013_106063194_106063270_106063429_106063518_106063663_106063754_106063850_106063949_106064062_106064306_106064402_106064483_106064590_106064661_106064730_106065033_106065099_106065485_106065593_106074284
ENSMUSG00000014782.17_0	chr8	+	4147	21	FSM	ENSMUSG00000014782.17	ENSMUST00000014927.8	4167	21	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGTTGACTGGGCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	106102024	106109486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106102488_106102647_106102744_106102821_106102946_106103051_106103146_106103225_106103301_106103380_106103498_106103668_106103768_106103856_106104006_106104170_106104310_106104398_106104516_106104931_106105115_106105312_106105819_106105886_106106134_106106754_106106845_106106925_106107148_106107233_106107405_106107482_106107661_106108026_106108144_106108265_106108491_106108572_106108689_106108867
ENSMUSG00000014786.9_0	chr8	+	3492	16	FSM	ENSMUSG00000014786.9	ENSMUST00000073149.7	3499	16	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGACTTAGTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	106075481	106095375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106076205_106080054_106080358_106081775_106081940_106082102_106082182_106082478_106082657_106083162_106083384_106083602_106083806_106084025_106084116_106084212_106084284_106085005_106085136_106085723_106085813_106085958_106086086_106089894_106090066_106090568_106090639_106091313_106091449_106094637
ENSMUSG00000014813.10_0	chr14	+	4175	4	FSM	ENSMUSG00000014813.10	ENSMUST00000014957.10	4197	4	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATGTTAAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69266703	69279248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_69266957_69268951_69269095_69269682_69269895_69275681
ENSMUSG00000014837.16_0	chr8	-	2545	8	FSM	ENSMUSG00000014837.16	ENST00000563902.2	2569	8	16	8	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATGATGTGTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	106015915	106007048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106007088_106008080_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400
ENSMUSG00000014837.16_1	chr8	-	3544	8	FSM	ENSMUSG00000014837.16	ENSMUST00000171788.8	3552	8	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGATGTGTGTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106016158	106007047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015400_106015798_106016035
ENSMUSG00000014837.16_18	chr8	-	2838	7	ISM	ENSMUSG00000014837.16	ENST00000290881.11	2884	8	14	1025	14	233	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCCCTCATGGGGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	106016141	106008080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015294
ENSMUSG00000014837.16_4	chr8	-	2859	8	FSM	ENSMUSG00000014837.16	ENST00000290881.11	2884	8	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAATTAAACAGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	106016141	106007066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106007088_106008080_106008777_106009618_106009717_106009806_106010113_106011297_106011431_106011661_106011806_106011887_106012502_106015294
ENSMUSG00000014846.13_0	chr8	-	1111	4	FSM	ENSMUSG00000014846.13	ENSMUST00000014990.13	1127	4	10	6	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGATGGACTGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	106198148	106194130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197911
ENSMUSG00000014846.13_1	chr8	-	966	4	FSM	ENSMUSG00000014846.13	ENST00000393957.7	981	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGATGGACTGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	106198013	106194130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106194657_106194787_106194942_106195071_106195266_106197921
ENSMUSG00000014850.16_1	chr13	-	3920	24	FSM	ENSMUSG00000014850.16	ENSMUST00000185852.7	3946	24	21	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCATGGCGTATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	92491482	92348384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372240_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUSG00000014850.16_14	chr13	-	3908	24	FSM	ENSMUSG00000014850.16	ENSMUST00000022220.13	3937	24	18	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGAATGAATACTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	92491493	92348404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_92349055_92351977_92352150_92357463_92357594_92359617_92359805_92372081_92372237_92386334_92386447_92393202_92393311_92400228_92400346_92402434_92402500_92410459_92410629_92411237_92411426_92422384_92422518_92435660_92435771_92436781_92436867_92445952_92446068_92449081_92449195_92478753_92478921_92481463_92481610_92483240_92483359_92483836_92483954_92485656_92485846_92487738_92487960_92489732_92489851_92491270
ENSMUSG00000014856.13_0	chr8	+	772	6	FSM	ENSMUSG00000014856.13	ENSMUST00000015000.12	785	6	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGCCGTGTGGGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	106052996	106055687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106053107_106053682_106053779_106054801_106054862_106054953_106055091_106055239_106055325_106055403
ENSMUSG00000014859.10_1	chr8	+	1975	10	FSM	ENSMUSG00000014859.10	ENSMUST00000015003.10	1993	10	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTATCTCTGATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	106024305	106031995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106024508_106024912_106025023_106025166_106025329_106025627_106025672_106026689_106026752_106026950_106027249_106027884_106028098_106030816_106030865_106031064_106031110_106031204
ENSMUSG00000014867.10_0	chr2	-	3269	6	FSM	ENSMUSG00000014867.10	ENSMUST00000015011.10	3281	6	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	5518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTGTGGTCCTATATG	NA	NA	NA	NA	NA	NA	NA	NA	26823929	26810052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26812184_26814356_26814544_26814964_26815009_26815619_26815697_26816780_26816968_26823286
ENSMUSG00000014873.16_0	chr2	+	1190	6	FSM	ENSMUSG00000014873.16	ENSMUST00000015017.8	1203	6	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATATGTGTATCATT	NA	NA	NA	NA	NA	NA	NA	NA	26806388	26810192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26806516_26806716_26806872_26807439_26807544_26808884_26809068_26809203_26809371_26809738
ENSMUSG00000014905.5_0	chr12	-	2436	3	FSM	ENSMUSG00000014905.5	ENSMUST00000015049.5	2461	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACATAACACATGACGT	NA	NA	NA	NA	NA	NA	NA	NA	44257096	44252353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_44254189_44254869_44255097_44256722
ENSMUSG00000014907.11_0	chr8	+	2978	8	FSM	ENSMUSG00000014907.11	ENSMUST00000118009.2	2990	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTGAATTTAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67312872	67343208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_67313699_67317189_67317353_67330318_67330413_67332250_67332334_67336094_67336256_67338416_67338469_67340424_67340528_67341712
ENSMUSG00000014932.16_0	chr5	+	4570	12	FSM	ENSMUSG00000014932.16	ENSMUST00000072311.13	4586	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATCTATGTATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	32768537	32844395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_32769182_32797674_32797948_32802351_32802452_32809000_32809100_32810306_32810411_32810500_32810651_32812449_32812606_32812771_32812952_32816378_32816456_32818095_32818250_32821612_32821745_32841894
ENSMUSG00000014956.16_0	chr5	+	5943	8	FSM	ENSMUSG00000014956.16	ENSMUST00000015100.15	5962	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAAAACTGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32616195	32652857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_32616752_32635409_32635542_32638033_32638265_32640703_32640809_32642602_32642675_32643224_32643377_32644914_32645050_32648297
ENSMUSG00000014959.13_0	chr2	+	2394	11	FSM	ENSMUSG00000014959.13	ENSMUST00000112201.8	2417	11	17	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTCTCCTTGTGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	70491936	70522063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70492105_70502908_70503106_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_1	chr2	+	2223	10	FSM	ENSMUSG00000014959.13	ENSMUST00000028509.11	2238	10	9	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCGAGCGTGTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	70491928	70522081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526_70519647_70521001
ENSMUSG00000014959.13_8	chr2	+	1170	9	FSM	ENSMUSG00000014959.13	ENSMUST00000112205.2	1196	9	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGGAAAGCGAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70491949	70519694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70492105_70506808_70506890_70508242_70508447_70508871_70508959_70509775_70509907_70513240_70513374_70514323_70514448_70518729_70518817_70519526
ENSMUSG00000014980.15_0	chr1	-	1111	5	FSM	ENSMUSG00000014980.15	ENSMUST00000015124.15	1133	5	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTGAAATCTGTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	152262422	152246496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152247035_152247504_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUSG00000014980.15_4	chr1	-	521	5	FSM	ENSMUSG00000014980.15	ENST00000533373.6	540	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGAGGTAGTCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	152262378	152246938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152247035_152247608_152247647_152259012_152259149_152259449_152259532_152262209
ENSMUSG00000015002.19_0	chr15	+	5200	23	FSM	ENSMUSG00000015002.19	ENSMUST00000015146.16	5215	23	10	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATAAGTGCATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65658898	65745660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65743001
ENSMUSG00000015002.19_8	chr15	+	2817	23	FSM	ENSMUSG00000015002.19	ENSMUST00000173858.8	2848	23	17	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAGAAAATGCAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	65658906	65741086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_65659096_65687183_65687261_65690281_65690410_65691568_65691720_65696462_65696585_65701575_65701726_65709283_65709422_65714490_65714570_65717757_65717894_65719996_65720159_65721611_65721727_65722972_65723025_65724809_65724983_65725379_65725456_65726477_65726640_65727264_65727397_65728370_65728439_65729312_65729441_65733500_65733593_65737726_65737776_65738572_65738677_65739118_65739169_65740802
ENSMUSG00000015013.10_0	chr8	+	388	4	FSM	ENSMUSG00000015013.10	ENST00000567895.5	397	4	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGTCATTAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	123338381	123341145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123338433_123339827_123339978_123340659_123340748_123341046
ENSMUSG00000015013.10_10	chr8	+	326	3	ISM	ENSMUSG00000015013.10	ENST00000567895.5	397	4	1456	10	1448	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATGGTCATTAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	123339836	123341143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123339978_123340659_123340748_123341046
ENSMUSG00000015013.10_2	chr8	+	1659	5	FSM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTGAGCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	123338384	123343399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123338433_123339804_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUSG00000015013.10_4	chr8	+	314	3	FSM	ENSMUSG00000015013.10	ENST00000567312.5	322	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGTCATTAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	123338388	123341145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123338433_123339804_123339976_123341046
ENSMUSG00000015013.10_7	chr8	+	1601	4	ISM	ENSMUSG00000015013.10	ENSMUST00000015157.10	1659	5	1430	0	1426	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTGAGCCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	123339814	123343399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123339978_123340659_123340748_123341046_123341127_123342129
ENSMUSG00000015013.10_8	chr8	+	258	2	ISM	ENSMUSG00000015013.10	ENST00000567312.5	322	3	1428	8	1428	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGGTCATTAGGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	123339816	123341145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123339976_123341046
ENSMUSG00000015016.9_0	chr8	+	2206	10	FSM	ENSMUSG00000015016.9	ENSMUST00000015160.6	2206	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123502243	123544619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123502330_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUSG00000015016.9_1	chr8	+	2601	10	FSM	ENSMUSG00000015016.9	ENSMUST00000212781.2	2604	10	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTTTGTGGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	123502261	123541165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123502330_123504815_123504963_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ENSMUSG00000015016.9_2	chr8	+	2516	9	ISM	ENSMUSG00000015016.9	ENSMUST00000212781.2	2604	10	2570	4	2512	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATGTTGTTTGTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	123504828	123541161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123504963_123506684_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298
ENSMUSG00000015016.9_3	chr8	+	2126	9	ISM	ENSMUSG00000015016.9	ENSMUST00000212790.2	2171	10	4362	0	4362	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGACCTGTGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123506678	123544619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123507375_123508171_123508328_123510685_123510841_123512557_123512704_123517328_123517439_123529253_123529381_123539733_123539869_123540298_123540411_123544130
ENSMUSG00000015023.8_0	chr8	-	2544	12	FSM	ENSMUSG00000015023.8	ENSMUST00000040416.8	2547	12	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGAATGTTTGTGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	111724431	111701629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111702723_111703060_111703253_111703599_111703763_111705099_111705338_111705667_111705846_111707184_111707300_111707622_111707726_111710212_111710306_111716105_111716242_111717108_111717160_111719688_111719738_111724298
ENSMUSG00000015027.12_0	chr8	-	2542	14	FSM	ENSMUSG00000015027.12	ENSMUST00000015171.11	2557	14	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACCACCTATCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	123338195	123304988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123318176_123318280_123318939_123319077_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUSG00000015027.12_7	chr8	-	2092	12	FSM	ENSMUSG00000015027.12	ENSMUST00000212319.2	2111	12	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTTTTGGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	123338130	123305133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123305937_123307789_123307908_123311650_123311773_123322504_123322609_123325258_123325399_123325777_123325906_123326011_123326079_123327213_123327358_123330116_123330220_123330877_123330953_123331878_123332003_123337966
ENSMUSG00000015053.15_1	chr6	+	3564	6	FSM	ENSMUSG00000015053.15	ENSMUST00000015197.9	3571	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGTCGCCTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88175322	88184012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181564_88181691_88182176
ENSMUSG00000015053.15_3	chr6	+	2478	6	FSM	ENSMUSG00000015053.15	ENST00000430265.6	2503	6	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	2182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATAAATAAGAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	88175669	88183315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88175864_88176498_88176772_88177200_88177843_88179400_88179547_88181606_88181691_88182176
ENSMUSG00000015083.12_0	chr2	-	1148	7	FSM	ENSMUSG00000015083.12	ENSMUST00000040042.11	1150	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTCGTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25390623	25388662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25388836_25388916_25388956_25389025_25389128_25389409_25389518_25389600_25389672_25389850_25389988_25390105
ENSMUSG00000015085.9_0	chr2	+	1919	9	FSM	ENSMUSG00000015085.9	ENSMUST00000028328.3	1935	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGTGAAGTGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	25285895	25291327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25286102_25287407_25287526_25288012_25288164_25288302_25288463_25288543_25288772_25289293_25289549_25289628_25289749_25290575_25290711_25290781
ENSMUSG00000015087.15_0	chr2	-	3213	15	FSM	ENSMUSG00000015087.15	ENSMUST00000058137.9	3230	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTACTGTGGTGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	25498522	25473035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25474001_25474114_25474174_25474787_25474957_25475319_25475549_25475635_25475846_25476879_25477031_25477286_25477640_25478620_25478725_25482309_25482416_25482778_25482920_25486444_25486537_25488156_25488210_25491362_25491411_25492432_25492568_25498124
ENSMUSG00000015092.10_0	chr2	+	705	5	FSM	ENSMUSG00000015092.10	ENSMUST00000015236.4	722	5	10	7	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATAGCCTCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	25447868	25452087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451862
ENSMUSG00000015092.10_1	chr2	+	766	5	FSM	ENSMUSG00000015092.10	ENST00000371649.5	780	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATAGCCTCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	25447945	25452087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25448042_25450162_25450215_25450551_25450713_25450980_25451075_25451724
ENSMUSG00000015094.17_0	chr2	+	1471	9	FSM	ENSMUSG00000015094.17	ENSMUST00000071442.12	1485	9	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTTCTGGGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	25293093	25299503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015094.17_12	chr2	+	1181	8	FSM	ENSMUSG00000015094.17	ENST00000371600.7	1195	8	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGTTTTTTTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	25296206	25299480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25296374_25297607_25297749_25297855_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015094.17_4	chr2	+	1389	9	FSM	ENSMUSG00000015094.17	ENST00000371601.5	1407	9	11	7	11	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGTGAGTGGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25293165	25299496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25293378_25296226_25296374_25297607_25297749_25297855_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015094.17_9	chr2	+	1400	10	FSM	ENSMUSG00000015094.17	ENSMUST00000055921.14	1412	10	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCTTCTGGGTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	25293193	25299505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25293378_25296226_25296374_25297474_25297555_25297660_25297749_25297852_25298027_25298125_25298193_25298271_25298360_25298618_25298699_25298916_25299014_25299110
ENSMUSG00000015095.13_0	chr2	+	2370	9	FSM	ENSMUSG00000015095.13	ENSMUST00000015239.10	2388	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACATGCCATCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	25390772	25395476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25390899_25391947_25392164_25392412_25392571_25392882_25393058_25393136_25393286_25393448_25393879_25394191_25394340_25394428_25394642_25394721
ENSMUSG00000015112.16_1	chr6	-	2935	17	FSM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTATTGATTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6191318	6041224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970_6181114_6191263
ENSMUSG00000015112.16_2	chr6	-	2875	16	ISM	ENSMUSG00000015112.16	ENST00000265631.10	2940	17	10210	5	6	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTATTGATTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	6181109	6041225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_6042333_6042558_6042650_6042740_6042900_6052764_6052904_6073401_6073543_6095146_6095228_6096669_6096723_6109180_6109340_6109936_6110022_6113937_6114023_6114224_6114319_6114969_6115109_6117098_6117246_6131628_6131769_6152407_6152524_6180970
ENSMUSG00000015112.16_27	chr6	-	229	2	FSM	ENSMUSG00000015112.16	ENST00000538551.1	245	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTGGTAAGGAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	6181105	6152414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_6152505_6180966
ENSMUSG00000015120.16_0	chr17	-	1122	7	FSM	ENSMUSG00000015120.16	ENSMUST00000049911.16	1138	7	9	7	1	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	5795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAAGGTTTTTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	25493275	25480896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25493146
ENSMUSG00000015120.16_17	chr17	-	813	7	FSM	ENSMUSG00000015120.16	ENSMUST00000174031.8	824	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCATTTCCGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	25492497	25481279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25492294
ENSMUSG00000015120.16_5	chr17	-	1279	8	FSM	ENSMUSG00000015120.16	ENSMUST00000173084.8	1286	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATATAAAGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25492357	25480901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25481466_25483739_25483820_25484092_25484203_25487514_25487588_25488165_25488250_25488376_25488454_25491511_25491740_25492294
ENSMUSG00000015126.10_0	chr17	+	1180	6	FSM	ENSMUSG00000015126.10	ENSMUST00000063574.7	1192	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGTTGCTTTGTACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25459155	25461772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25459339_25459417_25459638_25460037_25460232_25460661_25460836_25461132_25461197_25461427
ENSMUSG00000015127.15_2	chr17	+	1509	4	FSM	ENSMUSG00000015127.15	ENST00000397464.5	1533	4	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3032	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACAGCAAAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	25448221	25451664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25448441_25449180_25449384_25449494_25449603_25450685
ENSMUSG00000015133.18_0	chr7	-	7443	34	FSM	ENSMUSG00000015133.18	ENSMUST00000015277.14	7465	34	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGAAAACATGGCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	66038085	65908501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_65909842_65911485_65911588_65911793_65912645_65915172_65915290_65916238_65916357_65919485_65919638_65920474_65920670_65922564_65922843_65924523_65924722_65928270_65928438_65928941_65929192_65931375_65931516_65931921_65932086_65934982_65935155_65937187_65937465_65938831_65938992_65939360_65939482_65940475_65940649_65942004_65942170_65944541_65944757_65945160_65945274_65945868_65945999_65950609_65950687_65952402_65952516_65955140_65955279_65956592_65956757_65956852_65956981_65958408_65958636_65980416_65980566_65982026_65982207_65982862_65983035_65992509_65992674_66031199_66031415_66037967
ENSMUSG00000015134.16_0	chr7	-	1464	7	FSM	ENSMUSG00000015134.16	ENSMUST00000174209.8	1496	7	13	19	13	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	66076324	66058277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66059028_66061249_66061379_66062105_66062168_66062648_66062779_66068850_66068992_66071958_66072064_66076177
ENSMUSG00000015143.16_0	chr12	-	3712	21	FSM	ENSMUSG00000015143.16	ENSMUST00000021554.16	3734	21	21	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACTTTGCTTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80307124	80214321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80215255_80215631_80215791_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015143.16_2	chr12	-	3762	22	FSM	ENSMUSG00000015143.16	ENST00000394419.9	3782	22	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAACACTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	80307128	80214341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015143.16_23	chr12	-	3464	21	FSM	ENSMUSG00000015143.16	ENST00000684713.1	3476	21	8	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGAATATTTTATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	80307130	80214548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015143.16_3	chr12	-	3451	21	FSM	ENSMUSG00000015143.16	ENST00000684639.1	3474	21	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAACACTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	80306937	80214341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80217459_80217541_80218502_80218650_80219736_80219917_80220853_80220989_80221233_80221417_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80256132_80256248_80306760
ENSMUSG00000015143.16_5	chr12	-	3534	20	FSM	ENSMUSG00000015143.16	ENST00000682331.1	3558	20	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAACACTCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	80307164	80214341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80215255_80215631_80215791_80216956_80217023_80218502_80218650_80219736_80219917_80220853_80220989_80222929_80223071_80223961_80224071_80225075_80225227_80228134_80228283_80230166_80230398_80231580_80231674_80239141_80239228_80240409_80240492_80243168_80243248_80243699_80243788_80245754_80245842_80251735_80251856_80256132_80256248_80306760
ENSMUSG00000015149.15_0	chr7	+	1097	13	FSM	ENSMUSG00000015149.15	ENST00000358931.9	1113	13	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACAGTAACCATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	28466145	28487492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485279_28487186_28487254_28487341
ENSMUSG00000015149.15_12	chr7	+	1573	13	FSM	ENSMUSG00000015149.15	ENSMUST00000170068.9	1585	13	0	12	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAACTAACCATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	28466240	28488074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28466293_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUSG00000015149.15_3	chr7	+	1801	15	FSM	ENSMUSG00000015149.15	ENSMUST00000122915.8	1828	15	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAACAAAGCAACTAACC	NA	NA	NA	NA	NA	NA	NA	NA	28466168	28488067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28466293_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUSG00000015149.15_7	chr7	+	1816	16	FSM	ENSMUSG00000015149.15	ENSMUST00000072965.5	1843	16	4	23	4	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAAAACAAAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	28466195	28488062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28466293_28467056_28467104_28471235_28471285_28471519_28471634_28476282_28476325_28476420_28476528_28476615_28476673_28478346_28478416_28482193_28482324_28484804_28484865_28485088_28485145_28485230_28485308_28485389_28485442_28487007_28487079_28487186_28487254_28487341
ENSMUSG00000015165.17_0	chr7	+	2666	14	FSM	ENSMUSG00000015165.17	ENSMUST00000174548.8	2679	14	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	28507978	28521691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28508285_28510096_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015165.17_11	chr7	+	2136	13	FSM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTGGGTTGTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	28510320	28521691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28510594_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015165.17_21	chr7	+	1819	12	ISM	ENSMUSG00000015165.17	ENSMUST00000038572.15	2142	13	2407	26	2407	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	28512721	28521665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015165.17_9	chr7	+	1885	13	FSM	ENSMUSG00000015165.17	ENSMUST00000172529.8	1898	13	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAAACTATTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	28508236	28521665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28508285_28512703_28512823_28513278_28513517_28513626_28513713_28514523_28514621_28514704_28514778_28517885_28517958_28518068_28518350_28519577_28519700_28519969_28520172_28520640_28520699_28520816_28520913_28521272
ENSMUSG00000015176.12_0	chr19	+	3588	13	FSM	ENSMUSG00000015176.12	ENSMUST00000165017.2	3634	13	42	4	-36	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATGTGTTCAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	46064343	46073963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068346_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_14	chr19	+	2966	13	FSM	ENSMUSG00000015176.12	ENSMUST00000225780.2	2978	13	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACCTGCATGGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	46064387	46073388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_23	chr19	+	3515	13	FSM	ENSMUSG00000015176.12	ENSMUST00000223728.2	3523	13	6	2	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTTCAGAGTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	46064414	46073967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069742_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071803_46071958_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_52	chr19	+	2451	13	FSM	ENSMUSG00000015176.12	ENST00000605788.6	2461	13	10	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGGCAAAGCAAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	46064456	46072956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46064589_46067141_46067198_46067314_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072066_46072189_46072283_46072450
ENSMUSG00000015176.12_59	chr19	+	2362	13	FSM	ENSMUSG00000015176.12	ENST00000488254.6	2381	13	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAATCATGTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	46064471	46072879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46064589_46067141_46067198_46067311_46067461_46067569_46067698_46068349_46068525_46069751_46069862_46069979_46070116_46070686_46070816_46070954_46071066_46071178_46071807_46071964_46072066_46072189_46072283_46072450
ENSMUSG00000015189.13_0	chr6	+	3946	18	FSM	ENSMUSG00000015189.13	ENSMUST00000015333.12	3961	18	5	10	5	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATCAAGCCATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4600843	4643345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_4601302_4607982_4608080_4608633_4608755_4613234_4613280_4614648_4614712_4619288_4619334_4619760_4619885_4621071_4621287_4624051_4624475_4625465_4625556_4629961_4630082_4631007_4631165_4631518_4631599_4634001_4634104_4635745_4635887_4636968_4637047_4640914_4641008_4641851
ENSMUSG00000015202.14_0	chr10	-	3434	13	FSM	ENSMUSG00000015202.14	ENSMUST00000015346.12	3447	13	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGGGATTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	7162227	7069065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047_7085117_7088354_7088415_7090318_7090439_7092960_7093003_7102863_7102952_7104282_7104486_7110643_7110808_7161631
ENSMUSG00000015202.14_1	chr10	-	2546	6	FSM	ENSMUSG00000015202.14	ENSMUST00000150282.2	2554	6	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTGGGATTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	7085501	7069065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7070587_7076094_7076185_7076634_7076844_7079022_7079148_7084521_7084669_7085047
ENSMUSG00000015214.15_0	chrX	+	4610	15	FSM	ENSMUSG00000015214.15	ENSMUST00000015358.8	4634	15	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGTTGTCTCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	70408389	70462802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70408679_70413404_70413511_70426805_70426882_70431828_70431924_70432258_70432367_70435295_70435398_70436121_70436206_70436901_70437052_70437882_70438072_70444146_70444333_70445333_70445541_70448477_70448571_70454338_70454453_70455810_70455988_70460168
ENSMUSG00000015217.12_0	chrX	+	1562	5	FSM	ENSMUSG00000015217.12	ENSMUST00000072699.13	1571	5	6	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTGACTCACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70599529	70604279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70599615_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUSG00000015217.12_3	chrX	+	1729	5	FSM	ENSMUSG00000015217.12	ENSMUST00000114582.9	1743	5	11	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTGACTCACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70599544	70604279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70599797_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUSG00000015217.12_7	chrX	+	1690	5	FSM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	29	9	29	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCCTAAATTTCTGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	70599624	70604273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70599844_70601658_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUSG00000015217.12_9	chrX	+	1478	4	ISM	ENSMUSG00000015217.12	ENSMUST00000088874.10	1728	5	2062	3	2062	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTGACTCACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70601657	70604279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_70601814_70602038_70602179_70602703_70602879_70603272
ENSMUSG00000015222.19_0	chr1	+	5466	12	FSM	ENSMUSG00000015222.19	ENST00000447185.5	5475	12	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTCTCCTTTAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	66419678	66478165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66419933_66438547_66438662_66440602_66440681_66451577_66455307_66455502_66455710_66455890_66456026_66459293_66459356_66460804_66460950_66464355_66464688_66472672_66472755_66477412_66477526_66477950
ENSMUSG00000015247.11_0	chr4	+	1535	6	FSM	ENSMUSG00000015247.11	ENSMUST00000015391.10	1552	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGATTTTTTATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53011889	53022053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53012048_53015014_53015226_53017048_53017208_53020181_53020332_53021110_53021198_53021283
ENSMUSG00000015289.5_0	chrX	-	740	3	FSM	ENSMUSG00000015289.5	ENSMUST00000015433.4	761	3	15	6	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATTTTCAGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	73397209	73395772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73396105_73396479_73396609_73396930
ENSMUSG00000015289.5_1	chrX	-	734	3	FSM	ENSMUSG00000015289.5	ENSMUST00000114152.2	746	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATTTTCAGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	73397174	73395772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73396105_73396450_73396609_73396930
ENSMUSG00000015290.16_0	chrX	-	2431	4	FSM	ENSMUSG00000015290.16	ENSMUST00000155676.8	2442	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAATCCTGTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	73412269	73409324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73411193_73411306_73411516_73411758_73411865_73412021
ENSMUSG00000015290.16_1	chrX	-	1877	2	FSM	ENSMUSG00000032806.14	ENSMUST00000073067.11	1910	2	7	26	7	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAACCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73416904	73412848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73414618_73416796
ENSMUSG00000015290.16_2	chrX	-	1991	3	FSM	ENSMUSG00000032806.14	ENSMUST00000037967.6	2023	3	6	26	6	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAACCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73416949	73412848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73414618_73416219_73416289_73416796
ENSMUSG00000015291.11_0	chrX	+	2646	11	FSM	ENSMUSG00000015291.11	ENSMUST00000015435.11	2666	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAAGCCTGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73348615	73355460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73349048_73350184_73350293_73350450_73350551_73350708_73350844_73351277_73351477_73351735_73351868_73352681_73352782_73353568_73353741_73353995_73354141_73354243_73354299_73354392
ENSMUSG00000015312.10_0	chr10	+	1266	4	FSM	ENSMUSG00000015312.10	ENSMUST00000015456.10	1284	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTCGTGTTCTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	80765917	80768031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80766194_80766281_80766384_80766862_80767086_80767366
ENSMUSG00000015314.11_0	chr1	+	5701	9	FSM	ENSMUSG00000015314.11	ENSMUST00000195656.6	5729	9	22	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTTGGATTCATAGA	NA	NA	NA	NA	NA	NA	NA	NA	171745103	171780731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171745360_171761665_171762008_171764035_171764300_171765568_171765683_171766018_171766049_171766962_171767037_171769191_171769264_171775565_171775643_171776259
ENSMUSG00000015335.17_0	chr2	-	1142	5	FSM	ENSMUSG00000015335.17	ENSMUST00000102865.11	1165	5	18	5	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGCTGCCGTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	29983642	29980960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983500
ENSMUSG00000015335.17_2	chr2	-	1167	5	FSM	ENSMUSG00000015335.17	ENSMUST00000081838.7	1187	5	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAAGAAAAGCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	29983641	29980976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29981579_29981678_29981846_29981999_29982078_29982416_29982554_29983458
ENSMUSG00000015337.6_0	chr2	+	1046	3	FSM	ENSMUSG00000015337.6	ENSMUST00000015481.6	1063	3	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATCCTCCTGTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30061518	30064078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30062079_30062853_30062964_30063702
ENSMUSG00000015341.18_0	chr8	-	1785	6	FSM	ENSMUSG00000015341.18	ENSMUST00000051094.9	1792	6	0	7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23747090	23731368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689_23746823_23747035
ENSMUSG00000015341.18_1	chr8	-	1731	5	FSM	ENSMUSG00000015341.18	ENSMUST00000121783.7	1945	5	214	0	214	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACCCTCTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23746823	23731368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23732648_23734746_23734810_23735878_23735981_23740264_23740418_23746689
ENSMUSG00000015342.7_0	chrX	+	5034	3	FSM	ENSMUSG00000015342.7	ENSMUST00000015486.7	5076	3	35	7	35	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTCTTGCATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	9139029	9179482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_9139474_9148235_9148499_9175155
ENSMUSG00000015354.9_0	chr9	+	4423	9	FSM	ENSMUSG00000015354.9	ENSMUST00000015498.9	4438	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATATTCACATAATACC	NA	NA	NA	NA	NA	NA	NA	NA	95519662	95580143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_95519927_95520704_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576676_95576845_95577018
ENSMUSG00000015354.9_5	chr9	+	910	6	FSM	ENSMUSG00000015354.9	ENST00000485766.1	927	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTAGCCTGAGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	95520712	95577141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95576676_95576845_95577018
ENSMUSG00000015354.9_7	chr9	+	1581	8	FSM	ENSMUSG00000015354.9	ENST00000648195.1	1597	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCACATTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95520712	95577532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_95520814_95552057_95552314_95560397_95560523_95563585_95563723_95568738_95568894_95574913_95574998_95576635_95576845_95577018
ENSMUSG00000015357.11_0	chr9	+	2870	14	FSM	ENSMUSG00000015357.11	ENSMUST00000015501.11	2885	14	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCTCAATTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65201551	65237934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65219379_65219422_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015357.11_8	chr9	+	2795	13	FSM	ENSMUSG00000015357.11	ENSMUST00000113824.8	2809	13	8	6	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCCTCAATTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65201584	65237934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65201848_65207182_65207347_65209129_65209248_65215749_65215905_65217433_65217594_65223925_65224103_65224610_65224776_65225944_65226034_65228100_65228266_65229825_65230126_65231488_65231582_65234063_65234171_65237095
ENSMUSG00000015363.14_0	chr15	+	2423	10	FSM	ENSMUSG00000015363.14	ENSMUST00000081702.12	2439	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCCGCTTTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	88960225	88971274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88960345_88965182_88965248_88965555_88965635_88966153_88966321_88966853_88966995_88968900_88969012_88969105_88969246_88969476_88969650_88969728_88969841_88969958
ENSMUSG00000015365.16_0	chr15	+	4049	27	FSM	ENSMUSG00000015365.16	ENSMUST00000015509.11	4052	27	0	3	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCTTTCTGTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	88867196	88939352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88867265_88869717_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ENSMUSG00000015365.16_1	chr15	+	3977	26	ISM	ENSMUSG00000015365.16	ENSMUST00000015509.11	4052	27	2519	9	2519	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCAGACCCCTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88869715	88939346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_88869903_88872589_88872753_88878008_88878122_88879043_88879229_88880258_88880400_88880871_88881099_88881482_88881607_88882970_88883166_88888121_88888237_88889454_88889633_88889899_88889971_88891784_88891877_88895565_88895625_88896102_88896399_88902352_88902453_88904463_88904643_88905366_88905514_88906203_88906326_88907815_88907916_88908869_88909035_88910665_88910840_88931009_88931160_88937580_88937689_88938429_88938568_88938713_88938834_88939018
ENSMUSG00000015377.11_0	chr15	-	4566	20	FSM	ENSMUSG00000015377.11	ENSMUST00000078953.9	4585	20	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATACTTGTCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	89080638	89066421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89069313_89069394_89069470_89069564_89069668_89069740_89069851_89070196_89070251_89070374_89070465_89070565_89070631_89070956_89071023_89071158_89071254_89071350_89071447_89071534_89071658_89072355_89072412_89072661_89072725_89072813_89072894_89072976_89073083_89073639_89073721_89074443_89074557_89075076_89075120_89075192_89075232_89080421
ENSMUSG00000015396.5_0	chr13	+	2470	5	FSM	ENSMUSG00000015396.5	ENSMUST00000015540.4	2477	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAAGAGGTGTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43938250	43956601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43938727_43938821_43938944_43951008_43951205_43953077_43953185_43955032
ENSMUSG00000015461.16_0	chr17	+	2544	18	FSM	ENSMUSG00000015461.16	ENSMUST00000015605.15	2566	18	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGGCGGCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	34866134	34874041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34866291_34866633_34866714_34867192_34867272_34867550_34867643_34868091_34868228_34869274_34869361_34869473_34869610_34869693_34869826_34869959_34870094_34870535_34870722_34870803_34870896_34871621_34871802_34871962_34872071_34872187_34872270_34872475_34872547_34872677_34872790_34872894_34872980_34873444
ENSMUSG00000015468.15_0	chr17	+	6576	30	FSM	ENSMUSG00000015468.15	ENSMUST00000015612.14	6591	30	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATCTTCTGAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	34783250	34807471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34783484_34784274_34784357_34784446_34784743_34786315_34786664_34787137_34787261_34787366_34787604_34787690_34787847_34789008_34789204_34790710_34790825_34791469_34791584_34791651_34791775_34792722_34792883_34794036_34794183_34794380_34794534_34795382_34795501_34795742_34795831_34796391_34796543_34796921_34797107_34799893_34800147_34800352_34800466_34801372_34801897_34802323_34802708_34802802_34802979_34803385_34803606_34803754_34803825_34803964_34804104_34804878_34805184_34805500_34805649_34806090_34806189_34806347
ENSMUSG00000015474.17_0	chr17	-	1676	9	FSM	ENSMUSG00000015474.17	ENSMUST00000171121.9	1710	9	32	2	-26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	34846377	34835637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846298
ENSMUSG00000015474.17_1	chr17	-	1728	9	FSM	ENSMUSG00000015474.17	ENSMUST00000064953.15	1729	9	0	1	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTGGCTTGGCTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	34846351	34835637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846220
ENSMUSG00000015474.17_3	chr17	-	1129	9	FSM	ENSMUSG00000015474.17	ENSMUST00000166040.9	1139	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCCCACCAGGGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34847003	34836202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34836462_34836637_34836693_34841824_34841910_34842004_34842089_34844610_34844719_34844809_34844906_34845432_34845587_34845778_34845970_34846906
ENSMUSG00000015478.14_0	chr17	-	1226	6	FSM	ENSMUSG00000015478.14	ENSMUST00000015622.8	1238	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTCCCCAGTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	34822652	34820064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34820641_34820714_34820833_34820907_34820963_34821058_34821172_34821264_34821284_34822307
ENSMUSG00000015488.15_0	chr2	+	1270	4	FSM	ENSMUSG00000015488.15	ENSMUST00000114005.9	1286	4	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACCTGTTCATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	26899953	26906861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26905954
ENSMUSG00000015488.15_1	chr2	+	2193	3	FSM	ENSMUSG00000015488.15	ENSMUST00000114004.8	2194	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGTTTCCCATTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	26899938	26907436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26900118_26904104_26904178_26905495
ENSMUSG00000015488.15_3	chr2	+	1640	6	FSM	ENSMUSG00000015488.15	ENSMUST00000114006.8	1648	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGGTATACACAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	26899938	26911094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899_26908992_26910032
ENSMUSG00000015488.15_4	chr2	+	2679	5	FSM	ENSMUSG00000015488.15	ENSMUST00000114007.8	2689	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTCTGCCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	26899947	26911101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26900118_26904104_26904178_26905495_26905622_26908384_26908493_26908899
ENSMUSG00000015501.11_0	chr10	+	9929	10	FSM	ENSMUSG00000015501.11	ENST00000367604.6	9957	10	13	15	13	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATACAATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	13841543	14027095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13841965_13942326_13942429_13994572_13994659_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ENSMUSG00000015501.11_5	chr10	+	9596	10	FSM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	3	8	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGAAGTGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13842764	14027111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13842837_13942326_13942429_13994572_13994659_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ENSMUSG00000015501.11_8	chr10	+	9524	9	ISM	ENSMUSG00000015501.11	ENST00000367603.8	9607	10	99565	8	99565	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTGAAGTGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13942326	14027111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_13942429_13994572_13994659_14002195_14002241_14003036_14008543_14009483_14009639_14015128_14015305_14017984_14018087_14018802_14019699_14024655
ENSMUSG00000015522.19_0	chr3	+	2699	22	FSM	ENSMUSG00000015522.19	ENSMUST00000102749.11	2699	22	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTTTAGGATCCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	95341698	95402878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUSG00000015522.19_15	chr3	+	2342	20	FSM	ENSMUSG00000015522.19	ENST00000505755.5	2355	20	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATCTTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	95355690	95402752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397195_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUSG00000015522.19_27	chr3	+	4327	22	FSM	ENSMUSG00000015522.19	ENST00000358595.10	4338	22	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATCAGGAGTAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	95355686	95404737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95355795_95359895_95359941_95367687_95367733_95374103_95374149_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397195_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614_95403229_95403277
ENSMUSG00000015522.19_4	chr3	+	4313	21	FSM	ENSMUSG00000015522.19	ENSMUST00000090804.12	4325	21	7	5	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTGTGTTGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	95341707	95404546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95341873_95355682_95355795_95359895_95359941_95367687_95367733_95377487_95377702_95381849_95382064_95383390_95383494_95387505_95387572_95388064_95388151_95391082_95391160_95392169_95392305_95394559_95394635_95395665_95395818_95396902_95397014_95397191_95397268_95397565_95397690_95397863_95397967_95398333_95398482_95401008_95401172_95401757_95401925_95402614
ENSMUSG00000015536.15_0	chr13	+	1180	7	FSM	ENSMUSG00000015536.15	ENSMUST00000166104.9	1193	7	5	8	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGTCTAAAAATAGATC	NA	NA	NA	NA	NA	NA	NA	NA	114954776	114965251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_114954860_114955871_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015536.15_3	chr13	+	1843	6	FSM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	3	9	-1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACTTAGATTGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	114954797	114966057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_114954860_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015536.15_7	chr13	+	1098	6	ISM	ENSMUSG00000015536.15	ENSMUST00000184672.8	1447	7	1029	14	1029	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGTCTAAAAATAGATC	NA	NA	NA	NA	NA	NA	NA	NA	114955870	114965251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_114955994_114957337_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015536.15_9	chr13	+	1780	5	ISM	ENSMUSG00000015536.15	ENSMUST00000166176.9	1855	6	2544	9	2497	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACTTAGATTGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	114957338	114966057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_114957483_114961102_114961231_114961746_114961898_114962693_114962818_114964824
ENSMUSG00000015542.18_0	chr11	-	1194	7	FSM	ENSMUSG00000015542.18	ENSMUST00000103040.11	1204	7	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCCTTGTTTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	115078207	115073658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115074092_115074180_115074276_115074450_115074511_115075308_115075453_115075832_115075943_115077574_115077664_115077944
ENSMUSG00000015542.18_16	chr11	-	499	5	FSM	ENSMUSG00000015542.18	ENST00000581136.5	512	5	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACCAGGAAGGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	115075941	115073985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115074092_115074180_115074261_115074450_115074511_115075308_115075453_115075832
ENSMUSG00000015542.18_17	chr11	-	608	5	FSM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACCAGGAAGGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	115077654	115073985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115074092_115074180_115074349_115075308_115075453_115075832_115075943_115077574
ENSMUSG00000015542.18_18	chr11	-	531	4	ISM	ENSMUSG00000015542.18	ENST00000580632.5	615	5	1712	4	5	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACCAGGAAGGCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	115075945	115073985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_115074092_115074180_115074349_115075308_115075453_115075832
ENSMUSG00000015568.17_0	chr8	+	4100	10	FSM	ENSMUSG00000015568.17	ENSMUST00000015712.15	4115	10	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGATACTAAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	69333148	69359577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_69333493_69340094_69340256_69345246_69345427_69347278_69347391_69348313_69348548_69349250_69349494_69352068_69352190_69353799_69353983_69354935_69355038_69357157
ENSMUSG00000015575.16_1	chr17	+	758	4	FSM	ENSMUSG00000015575.16	ENSMUST00000236867.2	772	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAATCTGGCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26895137	26918614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26895289_26901651_26901700_26914328_26914459_26918185
ENSMUSG00000015575.16_3	chr17	+	803	4	FSM	ENSMUSG00000015575.16	ENSMUST00000015719.16	823	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAAATCTGGCTCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26895356	26918614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26895553_26901651_26901700_26914328_26914459_26918185
ENSMUSG00000015579.6_0	chr17	-	1508	2	FSM	ENSMUSG00000015579.6	ENSMUST00000015723.5	1525	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACGCGGGCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27060528	27057643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27058622_27059998
ENSMUSG00000015597.18_0	chr17	+	13049	10	FSM	ENSMUSG00000015597.18	ENSMUST00000113481.9	13060	10	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACACACACACACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46694657	46730940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46695257_46697637_46697790_46707587_46708231_46709565_46711018_46713659_46713760_46716708_46717011_46719944_46720146_46720605_46720706_46721198_46721318_46721559
ENSMUSG00000015605.7_0	chr17	-	2595	7	FSM	ENSMUSG00000015605.7	ENSMUST00000015749.7	2616	7	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTAACTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46867086	46859260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46860105_46860361_46860439_46860770_46860963_46861826_46861947_46862456_46862719_46864485_46864753_46866253
ENSMUSG00000015619.11_0	chr2	-	3185	6	FSM	ENSMUSG00000015619.11	ENSMUST00000102976.4	3215	6	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTAAAACAACAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	9883393	9861900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_9863466_9867905_9868032_9873571_9873718_9879199_9879737_9882162_9882796_9883215
ENSMUSG00000015647.10_0	chr2	-	11382	79	FSM	ENSMUSG00000015647.10	ENSMUST00000015791.6	11388	79	5	1	1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGTGTGTTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	179867647	179818166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179818558_179818680_179818801_179818895_179818987_179819066_179819201_179819283_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824262_179824559_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ENSMUSG00000015647.10_9	chr2	-	10627	75	FSM	ENSMUSG00000015647.10	ENST00000252999.7	10646	75	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAGGTATGTGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	179867636	179819290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179819438_179819527_179819693_179819801_179819998_179820069_179820216_179820307_179820423_179820513_179820685_179820802_179820934_179821044_179821322_179821398_179821548_179821628_179821752_179821866_179822030_179822102_179822237_179822401_179822556_179822634_179822772_179822885_179823063_179823142_179823292_179823364_179823545_179824150_179824257_179824555_179824663_179824756_179824899_179825112_179825268_179825410_179825528_179825810_179826008_179826193_179826365_179827121_179827234_179827415_179827527_179827606_179827759_179828354_179828505_179828593_179828775_179828968_179829070_179829338_179829554_179829651_179829733_179830057_179830186_179830359_179830474_179831125_179831357_179831952_179832037_179832122_179832225_179832432_179832595_179832697_179832839_179833020_179833166_179833343_179833549_179833886_179834099_179834181_179834298_179834655_179834796_179835196_179835324_179835484_179835687_179835767_179835866_179836282_179836392_179836467_179836629_179836938_179837093_179837164_179837272_179837347_179837491_179837673_179837813_179837960_179838118_179838276_179838377_179838828_179838935_179839018_179839069_179839165_179839272_179839509_179839563_179840053_179840192_179840267_179840403_179840488_179840624_179840722_179840861_179840942_179841084_179843250_179843314_179843513_179843649_179843771_179843863_179843953_179844073_179844184_179844301_179848517_179848616_179848725_179848897_179848979_179849099_179850046_179850165_179863018_179863172_179867283
ENSMUSG00000015652.10_0	chr5	-	1223	5	FSM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATCACAACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5799320	5786317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825_5792941_5799246
ENSMUSG00000015652.10_1	chr5	-	1147	4	ISM	ENSMUSG00000015652.10	ENSMUST00000015796.9	1230	5	6388	1	6388	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGTATCACAACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5792938	5786317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_5786674_5789795_5789961_5790349_5790863_5792825
ENSMUSG00000015653.14_0	chr5	-	10399	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115426.9	10408	6	2	7	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCGTAGAAAAACAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	5744576	5714835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5744379
ENSMUSG00000015653.14_1	chr5	-	10073	4	FSM	ENSMUSG00000015653.14	ENSMUST00000164219.8	10089	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCGTAGAAAAACAATTACA	NA	NA	NA	NA	NA	NA	NA	NA	5733052	5714835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533
ENSMUSG00000015653.14_2	chr5	-	3461	5	FSM	ENSMUSG00000015653.14	ENSMUST00000115427.8	3470	5	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCGATTCCCTGGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	5744057	5715959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5718106_5725840_5726006_5727316_5727845_5732533_5733056_5743957
ENSMUSG00000015653.14_4	chr5	-	4542	6	FSM	ENSMUSG00000015653.14	ENSMUST00000115425.9	4550	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAAGTGCTGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5744044	5720937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743602
ENSMUSG00000015653.14_5	chr5	-	3638	6	FSM	ENSMUSG00000015653.14	ENSMUST00000015797.11	3657	6	11	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGATGCAGGCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5744056	5721498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5723697_5725840_5726006_5727316_5727845_5732533_5733056_5733291_5733418_5743957
ENSMUSG00000015656.18_0	chr9	+	2380	9	FSM	ENSMUSG00000015656.18	ENSMUST00000015800.16	2394	9	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	66064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACAGTTGTCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	40712289	40716492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40712645_40713213_40713424_40713713_40713920_40714034_40714188_40714269_40714826_40715035_40715239_40715460_40715660_40715758_40715992_40716227
ENSMUSG00000015668.14_0	chrX	-	1616	7	FSM	ENSMUSG00000015668.14	ENSMUST00000015812.12	1626	7	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATACTACTGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	99670168	99666495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669491
ENSMUSG00000015668.14_5	chrX	-	1013	7	FSM	ENSMUSG00000015668.14	ENSMUST00000059099.7	1041	7	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAAAAACACAATACTG	NA	NA	NA	NA	NA	NA	NA	NA	99669530	99666530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99668994_99669421
ENSMUSG00000015668.14_7	chrX	-	761	7	FSM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	6	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTGGAAAAGGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99669546	99666802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893_99669048_99669471
ENSMUSG00000015668.14_8	chrX	-	686	6	ISM	ENSMUSG00000015668.14	ENST00000374454.1	771	7	505	4	494	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTGGAAAAGGAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99669047	99666802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_99667034_99667188_99667250_99667467_99667567_99668138_99668196_99668400_99668485_99668893
ENSMUSG00000015671.12_0	chr13	+	778	7	FSM	ENSMUSG00000015671.12	ENST00000677581.1	791	7	6	7	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTTAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	14787825	14800166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14787901_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_12	chr13	+	2815	7	ISM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	2772	20	2746	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACAACA	NA	NA	NA	NA	NA	NA	NA	NA	14790596	14802201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_14	chr13	+	704	6	ISM	ENSMUSG00000015671.12	ENST00000677581.1	791	7	3501	7	3470	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATTTTAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	14791320	14800166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_16	chr13	+	555	5	ISM	ENSMUSG00000015671.12	ENST00000445517.1	623	6	6043	11	6043	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGTTAAAACCAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	14793893	14800158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_4	chr13	+	2888	8	FSM	ENSMUSG00000015671.12	ENSMUST00000170836.4	2911	8	3	20	3	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	3674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAACAAAACACAACA	NA	NA	NA	NA	NA	NA	NA	NA	14787827	14802201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14787901_14790596_14790674_14791321_14791455_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015671.12_9	chr13	+	612	6	FSM	ENSMUSG00000015671.12	ENST00000445517.1	623	6	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGTTAAAACCAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	14787850	14800158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14787901_14793886_14794010_14795309_14795392_14798182_14798257_14799787_14799846_14799933
ENSMUSG00000015672.5_0	chr13	-	2985	3	FSM	ENSMUSG00000015672.5	ENSMUST00000220621.2	3013	3	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTAAGTAAAATTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	14787736	14782782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14785326_14786007_14786190_14787476
ENSMUSG00000015697.15_0	chr3	-	4594	22	FSM	ENSMUSG00000015697.15	ENSMUST00000107170.3	4622	22	11	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTAACAGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	95264502	95230852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246344_95247217_95247377_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244_95263514_95264375
ENSMUSG00000015697.15_14	chr3	-	933	7	FSM	ENSMUSG00000015697.15	ENST00000368963.5	945	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTCTTCCAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95263497	95248964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95249158_95252836_95252911_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ENSMUSG00000015697.15_5	chr3	-	4026	21	FSM	ENSMUSG00000015697.15	ENST00000271640.9	4041	21	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGCACTAGGGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	95263502	95231220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95231502_95231615_95231705_95231940_95232153_95233028_95233195_95233453_95233584_95233696_95233726_95234518_95235148_95235858_95236029_95244459_95244577_95245656_95246285_95247217_95247374_95247472_95247624_95248644_95248775_95248966_95249158_95252836_95252911_95253925_95254128_95254306_95254433_95255306_95255407_95257149_95257185_95261852_95262005_95263244
ENSMUSG00000015702.14_0	chr3	-	1841	13	FSM	ENSMUSG00000015702.14	ENSMUST00000107183.8	1872	13	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTCAAACCAAACCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	95214095	95203417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642_95213734_95213991
ENSMUSG00000015702.14_1	chr3	-	1824	13	FSM	ENSMUSG00000015702.14	ENSMUST00000015846.9	1851	13	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACTCAAACCAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	95214473	95203419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642_95213734_95214384
ENSMUSG00000015702.14_4	chr3	-	1737	12	ISM	ENSMUSG00000015702.14	ENSMUST00000107183.8	1872	13	378	15	378	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAACTCAAACCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	95213737	95203421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_95204164_95204547_95204671_95207463_95207523_95207612_95207709_95207841_95207927_95208402_95208463_95208621_95208702_95209645_95209737_95209976_95210091_95210296_95210392_95213172_95213270_95213642
ENSMUSG00000015709.10_0	chr7	-	2353	19	FSM	ENSMUSG00000015709.10	ENST00000303329.9	2369	19	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCCCAGAAATCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84059192	83899163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_83899363_83900573_83900711_83911600_83911767_83912386_83912526_83914782_83914883_83917112_83917237_83918046_83918120_83924542_83924695_83931304_83931380_83933200_83933336_83934981_83935059_83954004_83954091_83954401_83954468_83960080_83960184_83992949_83993164_83996549_83996764_84003727_84003776_84010761_84010877_84059062
ENSMUSG00000015711.9_0	chr3	-	3124	8	FSM	ENSMUSG00000015711.9	ENSMUST00000015855.8	3140	8	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTTGTTTCTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	95189372	95160985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95172728_95172932_95175541_95175635_95188895
ENSMUSG00000015711.9_1	chr3	-	1432	7	FSM	ENSMUSG00000015711.9	ENST00000368936.5	1441	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGGACAGCTCTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	95189044	95162146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95162739_95165337_95165497_95166550_95166646_95169521_95169681_95170902_95171088_95175541_95175635_95188895
ENSMUSG00000015714.12_0	chr3	+	2198	11	FSM	ENSMUSG00000015714.12	ENSMUST00000015858.12	2216	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTTGAGAAAGGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	95222403	95230901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95222657_95227372_95227547_95227952_95228071_95228252_95228372_95228500_95228559_95228646_95228698_95228885_95228979_95229141_95229271_95229437_95229545_95229630_95229785_95229959
ENSMUSG00000015714.12_9	chr3	+	535	2	NNC	ENSMUSG00000015714.12	novel	2216	11	NA	NA	7597	-33	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGACTGTGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	95229991	95230877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_95230115_95230465
ENSMUSG00000015733.14_7	chr6	+	2513	10	FSM	ENSMUSG00000015733.14	ENSMUST00000015877.14	2537	10	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	5990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGTAACTAATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	17636991	17666957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17637160_17648518_17648583_17650001_17650054_17654104_17654169_17656236_17656444_17657171_17657252_17660747_17660827_17662096_17662169_17665049_17665113_17665293
ENSMUSG00000015745.10_0	chr3	-	1913	6	FSM	ENSMUSG00000015745.10	ENSMUST00000015889.10	1931	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGACACCGGCTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	95903302	95895747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95896946_95898112_95898215_95898755_95898861_95899449_95899591_95902833_95902981_95903082
ENSMUSG00000015747.6_0	chr3	-	2625	15	FSM	ENSMUSG00000015747.6	ENSMUST00000015891.6	2637	15	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACAGGCTTCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95965772	95907149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95907464_95926920_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95954309_95954448_95954558_95954628_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015747.6_9	chr3	-	1550	12	FSM	ENSMUSG00000015747.6	ENST00000535106.5	1577	12	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACACAACACAAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	95965236	95926938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95927053_95938317_95938440_95940090_95940199_95940976_95941136_95948649_95948818_95949620_95949735_95950105_95950241_95953663_95953775_95955619_95955700_95960350_95960412_95964291_95964427_95964993
ENSMUSG00000015748.14_1	chr3	-	2911	16	FSM	ENSMUSG00000015748.14	ENSMUST00000015892.14	2933	16	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGGAGGCAGAGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	95763182	95737442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95763060
ENSMUSG00000015748.14_11	chr3	-	2703	16	FSM	ENSMUSG00000015748.14	ENSMUST00000161476.8	2732	16	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAAATTAGTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	95763042	95737939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741515_95742665_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874_95759006_95760755_95760950_95762631
ENSMUSG00000015748.14_20	chr3	-	1933	14	FSM	ENSMUSG00000015748.14	ENST00000519029.1	1945	14	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCACCGACTGAGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	95759001	95738144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95738278_95739872_95739935_95741064_95741149_95741395_95741555_95742661_95742780_95742955_95743056_95743725_95743870_95747981_95748062_95751497_95751665_95752236_95752544_95754686_95754908_95755076_95755161_95756226_95756374_95758874
ENSMUSG00000015749.13_0	chr3	+	1517	6	FSM	ENSMUSG00000015749.13	ENST00000629042.2	1540	6	12	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATAATGACTAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95836568	95854691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95836963_95844458_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_42	chr3	+	838	5	FSM	ENSMUSG00000015749.13	ENST00000533654.5	851	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCCGGTTAAGATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95836771	95852707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95845193_95845352_95852491
ENSMUSG00000015749.13_47	chr3	+	1394	7	FSM	ENSMUSG00000015749.13	ENST00000616917.4	1409	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTAAACACGAGGACGG	NA	NA	NA	NA	NA	NA	NA	NA	95841226	95854572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491_95852884_95854222
ENSMUSG00000015749.13_7	chr3	+	3253	7	FSM	ENSMUSG00000015749.13	ENSMUST00000165307.8	3274	7	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATAATGACTAGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95836567	95854691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95836963_95841220_95841371_95842087_95842211_95844335_95844508_95845193_95845352_95851618_95851674_95852491
ENSMUSG00000015750.16_0	chr3	+	1554	6	FSM	ENSMUSG00000015750.16	ENST00000414276.6	1569	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGGGGGGACTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	95801220	95804774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95801596_95802268_95802304_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015750.16_1	chr3	+	2844	6	FSM	ENSMUSG00000015750.16	ENSMUST00000015894.12	2863	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATACATTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95801289	95805590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548
ENSMUSG00000015750.16_2	chr3	+	1580	7	FSM	ENSMUSG00000015750.16	ENSMUST00000056710.10	1601	7	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAATAAAAAGGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	95801384	95804754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95801596_95802132_95802304_95802454_95802529_95802759_95802883_95803029_95803158_95803548_95803673_95804005
ENSMUSG00000015755.17_0	chr10	-	4365	7	FSM	ENSMUSG00000015755.17	ENSMUST00000146444.8	4380	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCTAATGTGGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	7831988	7781425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7796379_7800448_7800637_7831564
ENSMUSG00000015755.17_2	chr10	-	2959	6	FSM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGTCACTAGGCAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	7832020	7781656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877_7795725_7831929
ENSMUSG00000015755.17_4	chr10	-	2868	5	ISM	ENSMUSG00000015755.17	ENST00000636456.1	2972	6	36300	9	36267	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAGGTCACTAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	7795727	7781659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_7783342_7785810_7785892_7786852_7786947_7787151_7787313_7794877
ENSMUSG00000015757.11_0	chr10	+	3461	13	FSM	ENSMUSG00000015757.11	ENSMUST00000015901.11	3471	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCATGTGTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	7668664	7698899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7668785_7671407_7671476_7671560_7671626_7673521_7673640_7674178_7674322_7675316_7675414_7676497_7676615_7677608_7677734_7680719_7680787_7683034_7683147_7686125_7686223_7690427_7690576_7696715
ENSMUSG00000015759.12_0	chr14	-	1520	5	FSM	ENSMUSG00000015759.12	ENSMUST00000015903.12	1538	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAATTATTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	47025859	47013032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47021568_47021638_47025639
ENSMUSG00000015759.12_1	chr14	-	747	4	FSM	ENSMUSG00000015759.12	ENST00000553660.5	759	4	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAATGCCATCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	47025728	47013605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47014007_47016345_47016490_47017569_47017683_47025639
ENSMUSG00000015759.12_2	chr14	-	658	3	ISM	ENSMUSG00000015759.12	ENST00000553660.5	759	4	8051	7	8051	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAATGCCATCTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	47017682	47013605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_47014007_47016345_47016490_47017569
ENSMUSG00000015766.15_0	chr6	-	4552	22	FSM	ENSMUSG00000015766.15	ENSMUST00000058210.13	4567	22	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCACCTGGTTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137626274	137454248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137568415_137568491_137626049
ENSMUSG00000015766.15_128	chr6	-	3324	21	FSM	ENSMUSG00000015766.15	ENST00000646123.1	3340	21	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAGAGAAGACACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	137514688	137454928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137470545_137470570_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615
ENSMUSG00000015766.15_14	chr6	-	4129	21	FSM	ENSMUSG00000015766.15	ENSMUST00000100841.9	4151	21	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACACCAGAATGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	137548002	137454674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319_137516400_137547699
ENSMUSG00000015766.15_28	chr6	-	3511	20	FSM	ENSMUSG00000015766.15	ENST00000646918.1	3522	20	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAGTATTTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	137514688	137454717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615
ENSMUSG00000015766.15_29	chr6	-	3437	19	ISM	ENSMUSG00000015766.15	ENST00000646918.1	3522	20	9103	7	9103	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACAGTATTTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	137505589	137454717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522
ENSMUSG00000015766.15_98	chr6	-	3465	21	FSM	ENSMUSG00000015766.15	ENST00000642278.1	3480	21	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGGAAACACAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	137516442	137454890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137455632_137455819_137456128_137459149_137459280_137460539_137460721_137467214_137467438_137476579_137476724_137477532_137477642_137482385_137482520_137486079_137486261_137489146_137489296_137491275_137491351_137491700_137491790_137494068_137494196_137496440_137496515_137499150_137499288_137499827_137499911_137504085_137504236_137504365_137504528_137505522_137505591_137514615_137514693_137516319
ENSMUSG00000015776.13_0	chr2	-	3501	3	FSM	ENSMUSG00000015776.13	ENSMUST00000102899.10	3506	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGTCTTTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	26800684	26795273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26798314_26799004_26799086_26800304
ENSMUSG00000015776.13_3	chr2	-	941	4	FSM	ENSMUSG00000015776.13	ENSMUST00000015920.12	973	4	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTCCTGACTGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	26800549	26795599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26796006_26798104_26798314_26799004_26799086_26800304
ENSMUSG00000015790.17_0	chr2	-	1152	9	FSM	ENSMUSG00000015790.17	ENSMUST00000015934.13	1173	9	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAAACCATGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26806530	26803403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26803518_26803588_26803671_26803924_26804088_26804186_26804260_26804718_26804908_26805443_26805527_26805607_26805742_26805966_26806019_26806268
ENSMUSG00000015804.15_0	chr5	+	4543	4	FSM	ENSMUSG00000015804.15	ENSMUST00000156481.8	4560	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAACACTCCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45677579	45686610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_45677827_45679777_45679845_45680763_45680877_45682494
ENSMUSG00000015806.13_10	chr5	-	763	6	FSM	ENSMUSG00000015806.13	ENST00000428702.6	776	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCATTCCTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	45607449	45591789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45607348
ENSMUSG00000015806.13_18	chr5	-	555	5	FSM	ENSMUSG00000015806.13	ENST00000508623.5	564	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGCCCTCTCGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	45607449	45591897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45592021_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUSG00000015806.13_2	chr5	-	1368	7	FSM	ENSMUSG00000015806.13	ENSMUST00000015950.12	1380	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTTGTGTTGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45607572	45591400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45592021_45595184_45595269_45596626_45596736_45600778_45600920_45601988_45602086_45604917_45605011_45607348
ENSMUSG00000015837.16_1	chr11	-	2655	8	FSM	ENSMUSG00000015837.16	ENSMUST00000015981.12	2673	8	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATCCTACCATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	50101609	50090201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50091775_50093339_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015837.16_6	chr11	-	2023	8	FSM	ENSMUSG00000015837.16	ENSMUST00000102774.11	2037	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	9774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCCCTGTGATCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	50101645	50090983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50091775_50093225_50093422_50093640_50093862_50096849_50096931_50097986_50098129_50098233_50098464_50098647_50098744_50101379
ENSMUSG00000015839.7_0	chr2	-	2452	5	FSM	ENSMUSG00000015839.7	ENSMUST00000102672.5	2475	5	13	10	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAACTACTTTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	75534972	75505866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75534707
ENSMUSG00000015839.7_1	chr2	-	2340	5	FSM	ENSMUSG00000015839.7	ENST00000446151.6	2360	5	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTTAAACTACTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75533846	75505869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_75507529_75507888_75508057_75508831_75508922_75509506_75509774_75533690
ENSMUSG00000015846.16_0	chr2	+	4880	10	FSM	ENSMUSG00000015846.16	ENSMUST00000077257.12	4905	10	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTGTGTTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	27567236	27652968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27567473_27627310_27627577_27631064_27631216_27631775_27631956_27638623_27638794_27642323_27642454_27644234_27644368_27646210_27646303_27647772_27647879_27649552
ENSMUSG00000015850.12_0	chr3	-	4010	18	FSM	ENSMUSG00000015850.12	ENSMUST00000117782.8	4036	18	19	7	19	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAAACATGCTCTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	95595209	95583517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588233_95588333_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590617_95590721_95590942_95591550_95591670_95592009_95592268_95592327_95592765_95592982_95595131
ENSMUSG00000015850.12_6	chr3	-	2996	15	FSM	ENSMUSG00000015850.12	ENST00000674058.1	3009	15	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACCTACAGTGTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	95591972	95584025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95584280_95584420_95584566_95584837_95585018_95585117_95585316_95586897_95587075_95587300_95587506_95587754_95587885_95588046_95588121_95588407_95588446_95588569_95588743_95588961_95589167_95589519_95589657_95590549_95590721_95590942_95591550_95591670
ENSMUSG00000015869.17_1	chr11	-	1830	10	FSM	ENSMUSG00000015869.17	ENSMUST00000106391.8	1841	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGGCTGCTGAGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	116381164	116361671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116362382_116363002_116363150_116363769_116363841_116368027_116368174_116368885_116368942_116369350_116369467_116370477_116370651_116376694_116376762_116378943_116378997_116380873
ENSMUSG00000015880.14_0	chr5	+	3686	21	FSM	ENSMUSG00000015880.14	ENSMUST00000117396.3	3703	21	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCCATTTAACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	45827270	45857881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_45827476_45828361_45828566_45829614_45829844_45831699_45831846_45832110_45832196_45833290_45833484_45833933_45834084_45835688_45835830_45837189_45837314_45838713_45838798_45839068_45839249_45844653_45844765_45845902_45846023_45848943_45849169_45850498_45850681_45851093_45851269_45852995_45853158_45853374_45853511_45853814_45853887_45856182_45856253_45857189
ENSMUSG00000015882.19_0	chr5	-	5686	7	FSM	ENSMUSG00000015882.19	ENSMUST00000045586.13	5708	7	20	2	20	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAGATGTTTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	46014937	45854524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45859340_45893072_45893167_45904397_45904650_45932733_45932864_45933761_45933842_45952634_45952701_46014688
ENSMUSG00000015889.9_0	chr10	+	2015	19	FSM	ENSMUSG00000015889.9	ENSMUST00000016033.9	2029	19	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATTTTAAAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	93289281	93320731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93289531_93295678_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318111_93318195_93318823_93318929_93320524
ENSMUSG00000015889.9_8	chr10	+	1624	17	FSM	ENSMUSG00000015889.9	ENST00000413268.6	1635	17	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	93295688	93320682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93295810_93297171_93297293_93300306_93300376_93301810_93301916_93302973_93303027_93304617_93304691_93304909_93305051_93306661_93306686_93307157_93307229_93307715_93307828_93308760_93308906_93310337_93310442_93310779_93310851_93314308_93314364_93316552_93316649_93318823_93318929_93320524
ENSMUSG00000015890.3_0	chr10	-	2413	9	FSM	ENSMUSG00000015890.3	ENSMUST00000016034.3	2421	9	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCCACAAATCAATGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	93375892	93359204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93360365_93361707_93361869_93363054_93363149_93363458_93363584_93367339_93367566_93370249_93370528_93372486_93372552_93373120_93373228_93375695
ENSMUSG00000015932.9_0	chr2	+	1896	4	FSM	ENSMUSG00000015932.9	ENSMUST00000103172.4	1911	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTACCCTTTCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	143757248	143785238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_143757568_143780304_143780613_143781871_143781949_143784046
ENSMUSG00000015937.16_0	chr13	-	2036	9	FSM	ENSMUSG00000015937.16	ENSMUST00000016081.13	2046	9	6	4	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTGGCCGTGTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56283438	56221435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56237570_56237671_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUSG00000015937.16_1	chr13	-	1912	9	FSM	ENSMUSG00000015937.16	ENSMUST00000045788.9	1933	9	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTACGACTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	56283331	56221443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56236064_56236156_56243936_56244048_56252114_56252313_56252701_56252809_56276089_56276295_56283158
ENSMUSG00000015937.16_11	chr13	-	677	4	FSM	ENSMUSG00000015937.16	ENST00000423969.6	695	4	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATCCCCTCGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	56276259	56221963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_56222206_56230932_56231108_56232008_56232099_56276089
ENSMUSG00000015942.10_0	chr5	+	3456	16	FSM	ENSMUSG00000015942.10	ENSMUST00000016086.10	3482	16	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTGTGTGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	134212884	134246981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134213098_134220018_134220117_134221491_134221631_134223699_134223817_134225262_134225447_134226088_134226118_134230244_134230300_134231079_134231124_134232111_134232190_134235611_134235669_134237720_134237784_134240038_134240117_134241893_134241978_134242808_134242993_134243482_134243512_134244977
ENSMUSG00000015943.12_0	chr3	-	723	2	FSM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAAACGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96104902	96103909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96104596_96104865
ENSMUSG00000015943.12_1	chr3	-	988	4	FSM	ENSMUSG00000015943.12	ENSMUST00000107099.8	995	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAAACGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96105804	96103909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96104596_96104865_96105054_96105480_96105543_96105752
ENSMUSG00000015943.12_2	chr3	-	928	3	ISM	ENSMUSG00000015943.12	ENSMUST00000107099.8	995	4	271	6	271	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAAACGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96105534	96103909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_96104596_96104865_96105054_96105480
ENSMUSG00000015943.12_4	chr3	-	686	1	ISM	ENSMUSG00000015943.12	ENSMUST00000016087.4	729	2	307	6	307	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGTCAAACGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96104595	96103909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_96103900_96104600
ENSMUSG00000015944.10_0	chr5	+	7352	9	FSM	ENSMUSG00000015944.10	ENSMUST00000016088.9	7367	9	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTGTCTGATTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	134128563	134173181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134128991_134154710_134154782_134163989_134164184_134164418_134164552_134164943_134165068_134165888_134166000_134166302_134166386_134166874_134166970_134167067
ENSMUSG00000015961.9_0	chr1	-	2754	13	FSM	ENSMUSG00000015961.9	ENSMUST00000016105.9	2771	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTGATTCCTAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	177624067	177590534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177599637_177599793_177601140_177601268_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015961.9_8	chr1	-	1046	11	FSM	ENSMUSG00000015961.9	ENST00000588022.1	1054	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGGATTGCCAGCAACGC	NA	NA	NA	NA	NA	NA	NA	NA	177623921	177591814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_177591864_177595220_177595371_177597490_177597589_177598706_177598832_177603146_177603229_177604022_177604131_177604378_177604446_177610408_177610460_177611614_177611684_177612461_177612565_177623777
ENSMUSG00000015971.6_0	chr14	+	2099	13	FSM	ENSMUSG00000015971.6	ENSMUST00000016115.6	2119	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATGACACTGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	29700306	29715169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_29700546_29704555_29704727_29705986_29706098_29707882_29707988_29708233_29708408_29708878_29708973_29709175_29709309_29710145_29710300_29710909_29711006_29711616_29711758_29712660_29712926_29713548_29713713_29714917
ENSMUSG00000015980.15_0	chr7	+	2092	11	FSM	ENSMUSG00000015980.15	ENSMUST00000016124.15	2113	11	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGCCAAACTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	138792912	138822883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138793184_138794590_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807835_138807983_138810118_138810213_138816785_138816905_138818491_138818616_138822535
ENSMUSG00000015980.15_5	chr7	+	1669	9	FSM	ENSMUSG00000015980.15	ENSMUST00000106104.8	1692	9	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCACAATCAGGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	138793205	138808919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138793269_138794164_138794322_138794590_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807882_138807983_138808559
ENSMUSG00000015980.15_6	chr7	+	1602	8	ISM	ENSMUSG00000015980.15	ENSMUST00000106104.8	1692	9	981	5	981	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCACAATCAGGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	138794168	138808919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_138794322_138794590_138794876_138798143_138798275_138801309_138801369_138803504_138803658_138805916_138806278_138807882_138807983_138808559
ENSMUSG00000015994.11_0	chr8	-	1910	9	FSM	ENSMUSG00000015994.11	ENSMUST00000016138.11	1930	9	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAATGGAAATTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	26505668	26488759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26494443_26494593_26497214_26497342_26499692_26499798_26501117_26501233_26503497_26503584_26505408
ENSMUSG00000015994.11_12	chr8	-	596	5	FSM	ENSMUSG00000015994.11	ENST00000430308.1	614	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTGACATACCGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	26505594	26489503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26489593_26489796_26489969_26490997_26491061_26503497_26503584_26505408
ENSMUSG00000016018.5_0	chr13	-	3674	27	FSM	ENSMUSG00000016018.5	ENSMUST00000022281.5	3689	27	5	10	5	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATTAGTGGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	113063927	113003961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113004530_113005544_113005650_113009432_113009596_113011129_113011187_113012969_113013076_113017512_113017677_113019633_113019823_113023288_113023400_113023968_113024098_113027812_113027882_113028421_113028595_113032006_113032158_113035298_113035425_113038006_113038109_113039932_113040044_113041519_113041600_113043518_113043651_113045428_113045532_113046349_113046449_113047443_113047569_113049633_113049725_113050889_113051065_113054122_113054236_113055101_113055165_113056893_113056961_113058163_113058302_113063763
ENSMUSG00000016128.15_0	chr5	-	5636	14	FSM	ENSMUSG00000016128.15	ENSMUST00000110483.9	5662	14	11	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTCTATAAAAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	151113723	150960989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150963238_150965583_150965761_150968575_150968794_150969261_150969484_150970328_150970444_150971056_150971268_150975828_150976028_150982923_150983084_150984212_150984387_150985760_150987122_150996765_150996830_151016211_151016294_151018885_151018958_151113390
ENSMUSG00000016128.15_1	chr5	-	5513	14	FSM	ENSMUSG00000016128.15	ENSMUST00000062015.15	5526	14	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTATATTTATACCTC	NA	NA	NA	NA	NA	NA	NA	NA	151113656	150961102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150963238_150965583_150965761_150968575_150968794_150969261_150969484_150970328_150970444_150971056_150971268_150975828_150976028_150982923_150983141_150984212_150984387_150985760_150987122_150996765_150996830_151016211_151016294_151018885_151018958_151113390
ENSMUSG00000016179.12_0	chr1	-	2343	12	FSM	ENSMUSG00000016179.12	ENST00000009105.5	2349	12	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGTTTTGCTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	193044425	193028654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263_193037403_193038624_193038700_193042026_193042156_193044320
ENSMUSG00000016179.12_1	chr1	-	2428	13	FSM	ENSMUSG00000016179.12	ENST00000361322.3	2431	13	2	1	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGTTTTGCTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	193052551	193028654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_193029526_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263_193037403_193038624_193038700_193042026_193042156_193044320_193044442_193052482
ENSMUSG00000016179.12_11	chr1	-	2460	13	FSM	ENSMUSG00000016179.12	ENSMUST00000016323.11	2469	13	8	1	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGGTTTTGCTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	193052598	193028654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_193029511_193029639_193029756_193030364_193030793_193031026_193031115_193032582_193032662_193033297_193033411_193034675_193034752_193036299_193036424_193037263_193037403_193038624_193038700_193042026_193042156_193044320_193044442_193052482
ENSMUSG00000016181.10_0	chr1	-	5549	12	FSM	ENSMUSG00000016181.10	ENSMUST00000085555.7	5570	12	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAACTGAAACACCT	NA	NA	NA	NA	NA	NA	NA	NA	192812571	192786721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192790095_192796064_192796311_192796912_192797026_192797146_192797330_192799808_192800012_192800500_192800721_192802617_192803029_192804313_192804403_192805945_192806117_192810574_192810855_192811798_192811839_192812351
ENSMUSG00000016194.15_0	chr1	-	929	6	FSM	ENSMUSG00000016194.15	ENSMUST00000016338.15	1623	6	326	368	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGTGAGTGGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	192924611	192904309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482
ENSMUSG00000016194.15_1	chr1	-	1317	7	FSM	ENSMUSG00000016194.15	ENSMUST00000161737.8	1355	7	28	10	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCAAAACTAGTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	192946355	192904006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192904537_192905929_192906074_192922538_192922725_192922834_192922947_192923639_192923771_192924482_192924597_192946255
ENSMUSG00000016200.15_0	chr1	-	656	3	ISM	ENSMUSG00000016200.15	ENST00000481459.2	715	4	40142	4	40142	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTGAGGAAGTCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	192669185	192579622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_192579929_192584059_192584250_192669025
ENSMUSG00000016200.15_1	chr1	-	711	4	FSM	ENSMUSG00000016200.15	ENST00000481459.2	715	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTGAGGAAGTCGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	192709327	192579622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192579929_192584059_192584250_192669025_192669191_192709277
ENSMUSG00000016206.7_0	chr17	+	1418	8	FSM	ENSMUSG00000016206.7	ENSMUST00000038580.7	1438	8	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGAAAACTCACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37581116	37585361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37581226_37581412_37581683_37581888_37582165_37583159_37583436_37583538_37583644_37584609_37584643_37584756_37584804_37585059
ENSMUSG00000016239.12_0	chrX	+	2896	11	FSM	ENSMUSG00000016239.12	ENSMUST00000016383.10	2911	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAATGTTCATACTT	NA	NA	NA	NA	NA	NA	NA	NA	35592013	35625987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35593053_35596168_35596288_35598864_35598988_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ENSMUSG00000016239.12_1	chrX	+	2789	12	FSM	ENSMUSG00000016239.12	ENST00000422289.3	2804	12	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTACTAACCATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35593882	35626140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35594506_35596168_35596288_35598864_35598988_35603172_35603329_35605275_35605520_35606294_35606386_35614654_35614770_35617494_35617617_35619698_35619858_35621138_35621302_35622258_35622409_35625416
ENSMUSG00000016252.8_0	chr2	-	412	3	FSM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTTTGTTTCTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	174305889	174302864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174303015_174304292_174304423_174305757
ENSMUSG00000016252.8_2	chr2	-	547	2	ISM	ENSMUSG00000016252.8	ENSMUST00000016396.8	421	3	79	1073	3	-1073	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACGGTCTGGAACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	174305819	174303937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_174304423_174305757
ENSMUSG00000016253.13_0	chr2	+	2262	15	FSM	ENSMUSG00000016253.13	ENSMUST00000109075.8	2279	15	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGATATTTTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	174257608	174269290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174257750_174261819_174261939_174262116_174262227_174263502_174263613_174264359_174264468_174264844_174264998_174265168_174265300_174265775_174265942_174266398_174266534_174266906_174267047_174267705_174267821_174268109_174268206_174268281_174268423_174268609_174268740_174268823
ENSMUSG00000016256.11_0	chr2	-	1429	6	FSM	ENSMUSG00000016256.11	ENSMUST00000016400.9	1441	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTGTGTACTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	174280822	174269287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174269776_174270370_174270537_174270848_174271000_174275280_174275461_174279957_174280122_174280542
ENSMUSG00000016257.16_0	chr2	-	1535	6	FSM	ENSMUSG00000016257.16	ENSMUST00000016401.15	1553	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGACAGAAGAGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	174314864	174306867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174310090_174310181_174311129_174311299_174314624
ENSMUSG00000016257.16_8	chr2	-	720	5	FSM	ENSMUSG00000016257.16	ENST00000371033.9	731	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGGGGAGGATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	174314705	174307433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174307730_174308518_174308622_174308732_174308804_174311129_174311299_174314624
ENSMUSG00000016257.16_9	chr2	-	639	4	ISM	ENSMUSG00000016257.16	ENST00000371033.9	731	5	3412	6	-7	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGGGGAGGATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	174311298	174307433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_174307730_174308518_174308622_174308732_174308804_174311129
ENSMUSG00000016262.15_0	chr1	-	3311	4	FSM	ENSMUSG00000016262.15	ENSMUST00000155579.8	3350	4	28	11	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAATTCATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	192538036	192526806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192537750
ENSMUSG00000016262.15_1	chr1	-	3078	4	FSM	ENSMUSG00000016262.15	ENSMUST00000016406.14	3090	4	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAATTCATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	192534053	192526806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192529524_192532058_192532175_192533259_192533452_192534000
ENSMUSG00000016262.15_2	chr1	-	3011	3	ISM	ENSMUSG00000016262.15	ENSMUST00000016406.14	3090	4	612	16	612	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATCAAAATTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	192533443	192526812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_192529524_192532058_192532175_192533259
ENSMUSG00000016308.13_0	chrX	+	1701	6	FSM	ENSMUSG00000016308.13	ENSMUST00000016452.11	1732	6	11	20	11	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAATAACCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	36137958	36147855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36138183_36138363_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016308.13_4	chrX	+	1650	6	FSM	ENSMUSG00000016308.13	ENST00000630695.2	1665	6	8	7	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTAGTTCACACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36138018	36147871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36138183_36138370_36138445_36138819_36138846_36145309_36145400_36146251_36146341_36146664
ENSMUSG00000016319.4_0	chrX	+	1217	4	FSM	ENSMUSG00000016319.4	ENSMUST00000016463.4	1240	4	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	10167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAAAACCAGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36059313	36062447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36059495_36060495_36060983_36061388_36061530_36062039
ENSMUSG00000016344.15_0	chr2	+	1154	5	FSM	ENSMUSG00000016344.15	ENSMUST00000016488.13	1160	5	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCCAAGGTTGGGGATA	NA	NA	NA	NA	NA	NA	NA	NA	180829045	180830564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180829248_180829342_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUSG00000016344.15_1	chr2	+	680	5	FSM	ENSMUSG00000016344.15	ENSMUST00000108841.2	689	5	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCCCCTGGTATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	180829133	180830293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180829248_180829457_180829530_180829601_180829680_180829796_180829894_180829974
ENSMUSG00000016346.18_0	chr2	-	2553	14	FSM	ENSMUSG00000016346.18	ENST00000344462.8	2566	14	13	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGCCCCATGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	180776911	180722832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180723569_180724125_180724250_180728761_180728894_180729367_180729474_180730139_180730352_180742342_180742442_180746679_180746775_180750814_180750911_180751467_180751579_180753792_180753919_180754855_180755032_180755364_180755492_180756431_180756523_180776589
ENSMUSG00000016382.16_0	chrX	-	3139	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114059.10	3149	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTCTTTTGTTTTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	74918778	74829259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74918653
ENSMUSG00000016382.16_13	chrX	-	3225	16	FSM	ENSMUSG00000016382.16	ENSMUST00000033547.14	3242	16	10	7	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTATTCTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	74918170	74829275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74917943
ENSMUSG00000016382.16_16	chrX	-	3150	16	FSM	ENSMUSG00000016382.16	ENSMUST00000114057.8	3160	16	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAATTATTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	74886663	74829277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74830506_74834567_74834693_74834890_74835015_74837194_74837329_74837782_74837898_74838912_74838992_74839939_74840136_74843000_74843097_74844107_74844251_74845181_74845348_74846130_74846213_74848745_74848879_74849356_74849487_74859689_74859854_74870478_74870560_74886509
ENSMUSG00000016409.5_0	chrX	+	4220	9	FSM	ENSMUSG00000016409.5	ENSMUST00000016553.5	4230	9	8	2	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTTTTAATGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	36390455	36414397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36391029_36394630_36394712_36400164_36400236_36400404_36400546_36403329_36403394_36405290_36405401_36405489_36405566_36406557_36406708_36411443
ENSMUSG00000016427.8_0	chrX	-	398	3	FSM	ENSMUSG00000016427.8	ENSMUST00000016571.8	419	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATCTAAAGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	36454807	36451252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36451395_36453526_36453617_36454641
ENSMUSG00000016458.16_0	chr2	+	2948	9	FSM	ENSMUSG00000016458.16	ENST00000332351.9	2959	9	7	4	7	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAAAGGAAAATGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	104956945	105003947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000355_105002567
ENSMUSG00000016458.16_7	chr2	+	1490	9	FSM	ENSMUSG00000016458.16	ENST00000639563.3	1503	9	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGTCCGACACGGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	104957153	105002688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104957788_104963282_104963406_104963746_104963850_104973429_104973508_104993669_104993767_104997162_104997314_104999378_104999469_105000270_105000364_105002567
ENSMUSG00000016477.19_0	chr13	-	5083	7	FSM	ENSMUSG00000016477.19	ENSMUST00000102948.11	5097	7	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTCAGACTTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	30170041	30090566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_30094149_30095175_30095312_30097386_30097502_30100828_30100988_30102558_30102779_30104096_30104209_30169282
ENSMUSG00000016481.16_0	chr1	-	2756	10	FSM	ENSMUSG00000016481.16	ENSMUST00000193094.6	2776	10	11	9	-10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGACCACCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	194813641	194779698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_194781150_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016481.16_1	chr1	-	1478	9	FSM	ENSMUSG00000016481.16	ENSMUST00000194111.6	1501	9	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAGACAGAAGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	194813619	194780977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_194781150_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813367
ENSMUSG00000016481.16_2	chr1	-	1637	10	FSM	ENSMUSG00000016481.16	ENSMUST00000075451.12	1651	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTAGGTGTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	194813861	194786103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_194786216_194789125_194789231_194793387_194793464_194794681_194794706_194796963_194797150_194799786_194800189_194805997_194806084_194811454_194811555_194812137_194812318_194813495
ENSMUSG00000016487.16_0	chr6	+	4831	27	FSM	ENSMUSG00000016487.16	ENSMUST00000016631.14	4851	27	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGCCTTGTGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	146789996	146933515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ENSMUSG00000016487.16_21	chr6	+	4768	28	FSM	ENSMUSG00000016487.16	ENSMUST00000111623.9	4782	28	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTGCCTTGTGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	146790092	146933515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146790182_146840403_146840488_146878101_146878201_146879541_146879748_146892011_146892099_146893899_146894014_146894803_146894936_146897887_146897981_146899664_146899780_146901159_146901193_146902438_146902501_146903691_146903768_146907345_146907501_146911469_146911586_146912360_146912418_146913952_146914017_146917719_146917892_146920531_146920680_146920957_146921087_146922798_146922950_146923643_146923756_146923859_146923949_146927012_146927136_146927652_146927779_146928805_146928995_146931058_146931236_146931580_146931647_146931811
ENSMUSG00000016494.10_0	chr1	+	2434	8	FSM	ENSMUSG00000016494.10	ENSMUST00000016638.8	2454	8	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGAAATATTTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	194621135	194643576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642243
ENSMUSG00000016494.10_7	chr1	+	2535	8	FSM	ENSMUSG00000016494.10	ENSMUST00000110815.9	2554	8	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGAAATATTTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	194621190	194643576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_194621353_194630146_194630315_194631612_194631873_194633246_194633328_194640724_194640882_194641117_194641171_194641373_194641539_194642087
ENSMUSG00000016495.13_0	chr19	-	1002	6	FSM	ENSMUSG00000016495.13	ENSMUST00000143467.8	1020	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACCCCAATGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29339359	29326005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29339196
ENSMUSG00000016495.13_6	chr19	-	584	4	FSM	ENSMUSG00000016495.13	ENSMUST00000152936.8	604	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCATTCAAATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	29339260	29326083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29326406_29335716_29335804_29338216_29338328_29339196
ENSMUSG00000016495.13_8	chr19	-	1000	7	FSM	ENSMUSG00000016495.13	ENSMUST00000016639.12	1012	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTCCACCAAATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	29339366	29326112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29326406_29327759_29327870_29328443_29328575_29335716_29335804_29338216_29338328_29338441_29338540_29339196
ENSMUSG00000016498.11_0	chr19	+	856	4	FSM	ENSMUSG00000016498.11	ENST00000397747.5	871	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGGGCTCCGAAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	29414634	29448036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29414936_29423318_29423589_29431864_29432029_29447915
ENSMUSG00000016503.19_0	chr5	+	1276	9	FSM	ENSMUSG00000016503.19	ENSMUST00000146511.8	1298	9	13	9	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCGACTCTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	146885479	146892415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933_146891994_146892177
ENSMUSG00000016503.19_10	chr5	+	1419	8	FSM	ENSMUSG00000016503.19	ENSMUST00000132102.2	1426	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACAACATCCGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	146885514	146892409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146885786_146887342_146887444_146887996_146888094_146888683_146888773_146889536_146889611_146890036_146890118_146890657_146890888_146891933
ENSMUSG00000016510.12_0	chr5	-	4917	4	FSM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTGTCTCGGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	146900591	146888388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900521
ENSMUSG00000016510.12_1	chr5	-	4846	3	ISM	ENSMUSG00000016510.12	ENSMUST00000066675.10	4927	4	4510	6	4474	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTGTCTCGGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	146896085	146888388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_146892626_146893596_146893755_146895634
ENSMUSG00000016510.12_3	chr5	-	2121	5	FSM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	2	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTAGAGGCTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	146900595	146891337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030_146900191_146900532
ENSMUSG00000016510.12_4	chr5	-	2059	4	ISM	ENSMUSG00000016510.12	ENSMUST00000016654.9	2131	5	408	6	370	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAGAGGCTGTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	146900189	146891335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_146892626_146893596_146893755_146895634_146896087_146900030
ENSMUSG00000016520.8_0	chr5	-	4548	10	FSM	ENSMUSG00000016520.8	ENSMUST00000016664.8	4557	10	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGGAGCCCGCCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	147013394	146953471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146955867_146956816_146956976_146961161_146961394_146964016_146964195_146964862_146965001_146965896_146966266_146969684_146969885_146970088_146970331_146978840_146979309_147013227
ENSMUSG00000016526.9_0	chr1	-	3148	3	FSM	ENSMUSG00000016526.9	ENSMUST00000016670.9	3164	3	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAACTCATGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	131066064	131055194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131057983_131063996_131064109_131065816
ENSMUSG00000016528.11_0	chr1	-	2834	10	FSM	ENSMUSG00000016528.11	ENSMUST00000016672.11	2854	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTTGAAAGTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	131025554	130981447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_130982973_130983495_130983577_130983665_130983752_130984150_130984276_130984625_130984702_130985230_130985358_130985737_130985818_130986088_130986154_130986359_130986500_131025025
ENSMUSG00000016534.16_2	chrX	-	1755	9	FSM	ENSMUSG00000016534.16	ENSMUST00000016678.14	1769	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGTGTTCTGTTTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	37545322	37493943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37494449_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016534.16_8	chrX	-	3588	9	FSM	ENSMUSG00000016534.16	ENSMUST00000061755.9	3604	9	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAATTTGCTCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	37545317	37508385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37510729_37513143_37513309_37514239_37514304_37519794_37519918_37520726_37520939_37524272_37524432_37529007_37529222_37530901_37531018_37545125
ENSMUSG00000016541.11_0	chr15	+	1920	12	FSM	ENSMUSG00000016541.11	ENSMUST00000163242.3	1937	12	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3951	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTGGGACCCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	85220459	85347410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85220782_85243654_85243847_85249477_85249561_85259522_85259620_85260744_85260904_85267104_85267186_85271191_85271358_85275838_85275948_85277537_85277708_85322302_85322367_85346480_85346669_85347121
ENSMUSG00000016552.14_0	chr15	-	4765	9	FSM	ENSMUSG00000016552.14	ENSMUST00000016696.13	4793	9	20	8	20	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACAATTTCTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	77840902	77824729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77827593_77829778_77829950_77831217_77831460_77832553_77832720_77836169_77836337_77836494_77836762_77837482_77837735_77839788_77840290_77840766
ENSMUSG00000016554.10_0	chr15	-	1888	15	FSM	ENSMUSG00000016554.10	ENSMUST00000100484.6	1899	15	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGTCCTGTGCTCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	77855002	77843197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77843323_77843711_77843996_77844153_77844297_77845813_77845944_77846045_77846132_77846639_77846771_77847377_77847526_77848219_77848353_77849102_77849216_77850337_77850411_77850881_77850968_77851502_77851640_77852375_77852422_77852656_77852790_77854882
ENSMUSG00000016559.15_0	chr11	-	2506	6	FSM	ENSMUSG00000016559.15	ENSMUST00000106454.8	2514	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAAGATCCATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	115918780	115912737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204_115915545_115916130_115916282_115918681
ENSMUSG00000016559.15_12	chr11	-	1974	4	FSM	ENSMUSG00000016559.15	ENSMUST00000016703.8	1993	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCTCTGTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	115915320	115912795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115914362_115914450_115914605_115914707_115914846_115915204
ENSMUSG00000016559.15_16	chr11	-	670	3	FSM	ENSMUSG00000016559.15	ENST00000591890.5	685	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTTGGGTAGCTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	115914836	115913963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115914362_115914461_115914605_115914707
ENSMUSG00000016619.11_0	chr15	+	4746	8	FSM	ENSMUSG00000016619.11	ENSMUST00000165443.4	4766	8	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAAACCAGCGTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	84807620	84827153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84807852_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUSG00000016619.11_4	chr15	+	1898	9	FSM	ENSMUSG00000016619.11	ENSMUST00000230411.2	1900	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTTCTCCCTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	84807651	84824208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84807852_84808969_84809098_84811568_84811648_84813572_84813657_84817735_84817920_84819064_84819725_84821687_84821770_84822558_84822678_84823846
ENSMUSG00000016637.8_0	chr15	-	746	7	FSM	ENSMUSG00000016637.8	ENSMUST00000230844.2	760	7	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGAGCAACAACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	78057671	78043674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057587
ENSMUSG00000016637.8_2	chr15	-	994	7	FSM	ENSMUSG00000016637.8	ENSMUST00000016781.8	1013	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGAGCAACAACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	78058300	78043674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78043909_78048389_78048500_78049346_78049465_78050173_78050234_78051269_78051330_78052112_78052193_78057968
ENSMUSG00000016664.17_0	chr15	-	3684	11	FSM	ENSMUSG00000016664.17	ENSMUST00000171436.8	3693	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGTCACTTTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	83348798	83259807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83348659
ENSMUSG00000016664.17_7	chr15	-	3174	11	FSM	ENSMUSG00000016664.17	ENSMUST00000165095.9	3186	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTGCATCCACCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83317004	83260318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316864
ENSMUSG00000016664.17_9	chr15	-	3095	11	FSM	ENSMUSG00000016664.17	ENSMUST00000231184.2	3103	11	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCCTTTGCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	83317023	83260328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83261932_83263199_83263397_83263884_83264008_83265962_83266085_83269187_83269309_83270862_83271039_83272715_83272872_83274623_83274860_83276701_83276859_83286067_83286201_83316952
ENSMUSG00000016756.18_0	chr13	+	2437	18	FSM	ENSMUSG00000016756.18	ENSMUST00000050859.13	2444	18	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTTTCATAGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	24511408	24653822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_24511472_24514277_24514440_24579181_24579471_24600883_24600994_24601206_24601408_24606582_24606675_24612811_24612922_24614470_24614662_24619082_24619231_24619589_24619672_24620602_24620741_24623104_24623241_24640861_24641003_24644134_24644310_24648191_24648309_24650742_24650859_24652529_24652627_24653753
ENSMUSG00000016756.18_10	chr13	+	3117	16	FSM	ENSMUSG00000016756.18	ENSMUST00000224657.2	3124	16	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAGAGACTATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	24599105	24654988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_24599134_24600883_24600994_24601206_24601408_24606582_24606675_24612811_24612922_24614470_24614662_24619082_24619231_24619589_24619672_24620602_24620741_24623104_24623241_24640861_24641003_24644134_24644310_24648191_24648309_24650742_24650859_24652529_24652627_24653753
ENSMUSG00000016756.18_13	chr13	+	3085	15	ISM	ENSMUSG00000016756.18	ENSMUST00000224657.2	3124	16	1783	6	1783	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATCTAGAGACTATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	24600887	24654988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_24600994_24601206_24601408_24606582_24606675_24612811_24612922_24614470_24614662_24619082_24619231_24619589_24619672_24620602_24620741_24623104_24623241_24640861_24641003_24644134_24644310_24648191_24648309_24650742_24650859_24652529_24652627_24653753
ENSMUSG00000016756.18_2	chr13	+	9712	17	FSM	ENSMUSG00000016756.18	ENSMUST00000167746.8	9727	17	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAGCCCAGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24511409	24661260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_24511472_24579181_24579471_24600883_24600994_24601206_24601408_24606582_24606675_24612811_24612922_24614470_24614662_24619082_24619231_24619589_24619672_24620602_24620741_24623104_24623241_24640861_24641003_24644134_24644310_24648191_24648309_24650742_24650859_24652529_24652627_24653753
ENSMUSG00000016757.12_0	chr15	-	3762	14	FSM	ENSMUSG00000016757.12	ENSMUST00000016901.5	3774	14	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGTCAGGTACTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83479349	83459293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83461250_83461947_83462087_83462835_83462905_83464268_83464351_83464695_83464848_83465868_83465981_83466245_83466441_83466546_83466664_83468856_83468934_83471051_83471186_83471274_83471435_83472703_83472903_83475579_83475750_83479149
ENSMUSG00000016758.5_0	chr15	+	930	5	FSM	ENSMUSG00000016758.5	ENSMUST00000016902.5	942	5	5	7	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGTCTCCCCTTAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	83411067	83428828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_83411138_83425495_83425644_83427265_83427365_83427780_83427899_83428333
ENSMUSG00000016758.5_1	chr15	+	867	4	ISM	ENSMUSG00000016758.5	ENSMUST00000230912.2	1335	5	14420	1	-1246	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCCTTAGGTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	83425492	83428832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_83425644_83427265_83427365_83427780_83427899_83428333
ENSMUSG00000016831.13_0	chr14	+	5338	10	FSM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGCAATTCTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52516607	52533851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52516690_52516844_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ENSMUSG00000016831.13_4	chr14	+	5256	9	ISM	ENSMUSG00000016831.13	ENSMUST00000022766.8	5350	10	242	7	242	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGCAATTCTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52516844	52533851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_52517114_52517277_52517347_52523116_52523360_52524185_52524447_52524757_52524989_52528217_52528299_52528931_52529676_52529976_52530141_52530657
ENSMUSG00000016833.15_0	chr5	+	623	6	FSM	ENSMUSG00000016833.15	ENSMUST00000016977.15	638	6	9	6	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATTTGAGTGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	100946501	100952331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100950918_100950977_100951835_100951896_100952197
ENSMUSG00000016833.15_1	chr5	+	452	5	FSM	ENSMUSG00000016833.15	ENSMUST00000112898.8	460	5	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGACTCCAACTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	100946604	100952321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100946727_100947417_100947480_100949773_100949858_100951835_100951896_100952197
ENSMUSG00000016833.15_2	chr5	+	245	4	FSM	ENSMUSG00000016833.15	ENST00000507019.5	255	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTTGTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100947422	100952267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100947480_100950918_100950977_100951835_100951896_100952197
ENSMUSG00000016833.15_3	chr5	+	183	3	ISM	ENSMUSG00000016833.15	ENST00000507019.5	255	4	3501	10	3501	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTTGTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100950923	100952267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_100950977_100951835_100951896_100952197
ENSMUSG00000016918.16_0	chr1	+	5587	22	FSM	ENSMUSG00000016918.16	ENSMUST00000177608.8	5598	22	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTTACTCGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	12762503	12931408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_12762909_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ENSMUSG00000016918.16_10	chr1	+	4624	22	FSM	ENSMUSG00000016918.16	ENSMUST00000088585.10	4630	22	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGCTTGCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	12788758	12930601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_12789008_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554_12918679_12920983_12921018_12929035
ENSMUSG00000016918.16_5	chr1	+	3190	20	FSM	ENSMUSG00000016918.16	ENST00000616868.1	3211	20	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCCAAGAGCCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	12788684	12918655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_12789123_12798817_12798913_12856302_12856376_12856691_12856923_12866989_12867230_12875403_12875556_12878077_12878248_12887561_12887713_12888601_12888778_12890624_12890754_12891018_12891076_12892193_12892324_12906336_12906554_12908582_12908836_12910052_12910150_12910626_12910722_12911666_12911733_12912872_12913049_12918318_12918462_12918554
ENSMUSG00000016921.15_0	chr2	+	3506	6	FSM	ENSMUSG00000016921.15	ENSMUST00000130411.7	3527	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGGAAAGACTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	162773457	162779030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162773698_162773913_162774063_162775345_162775471_162775573_162775783_162776147_162776232_162776331
ENSMUSG00000016933.18_0	chr2	+	4431	34	FSM	ENSMUSG00000016933.18	ENSMUST00000103115.8	4435	34	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGAACTCGTTGATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	160573229	160617676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160573265_160573637_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160616447_160616508_160617269
ENSMUSG00000016933.18_2	chr2	+	4387	33	ISM	ENSMUSG00000016933.18	ENSMUST00000103115.8	4435	34	417	4	-6	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGAACTCGTTGATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	160573646	160617676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160616447_160616508_160617269
ENSMUSG00000016933.18_3	chr2	+	5098	32	FSM	ENSMUSG00000016933.18	ENSMUST00000109462.8	5107	32	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTAACTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	160573661	160605206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160573954_160589694_160589848_160589953_160590048_160590201_160590250_160592882_160592968_160593062_160593147_160593355_160593391_160593552_160593626_160593703_160593806_160594007_160594127_160594214_160594301_160594373_160594495_160595104_160595274_160595361_160595485_160595562_160595665_160595743_160595932_160596204_160596406_160596482_160596603_160596680_160596862_160597660_160597739_160598460_160598565_160598789_160598887_160599133_160599204_160599891_160600050_160601373_160601471_160601601_160601827_160601902_160602052_160602999_160603115_160603224_160603387_160603479_160603569_160603658_160603844_160604013
ENSMUSG00000016940.19_0	chr11	+	1744	6	FSM	ENSMUSG00000016940.19	ENSMUST00000103035.10	1764	6	12	8	-10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTGATACCTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115310965	115322092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105_115320232_115321138
ENSMUSG00000016940.19_1	chr11	+	2636	5	FSM	ENSMUSG00000016940.19	ENSMUST00000106533.8	2649	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGTGATACCTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	115310980	115322092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115311333_115312808_115312918_115315309_115315402_115318258_115318355_115320105
ENSMUSG00000016942.7_0	chr15	-	2646	18	FSM	ENSMUSG00000016942.7	ENST00000406856.7	2659	18	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGTTCTACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78352799	78324414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78324573_78324807_78325017_78326481_78326754_78327876_78328046_78328295_78328413_78329483_78329598_78330403_78330503_78330862_78331009_78336675_78336786_78336991_78337105_78338344_78338482_78339113_78339319_78343629_78343672_78343944_78344124_78344639_78344708_78345444_78345579_78349308_78349509_78352625
ENSMUSG00000016942.7_1	chr15	-	2263	16	FSM	ENSMUSG00000016942.7	ENST00000381792.6	2277	16	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGTTCTACAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78345569	78324414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78324573_78324807_78325017_78326481_78326754_78327876_78328046_78328295_78328413_78329483_78329598_78330403_78330503_78330862_78331009_78336675_78336786_78336991_78337105_78338344_78338482_78339113_78339319_78343629_78343672_78343944_78344124_78344639_78344708_78345444
ENSMUSG00000016946.7_0	chr17	-	2428	6	FSM	ENSMUSG00000016946.7	ENSMUST00000017090.6	2443	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTTCAGCAACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	24292449	24266712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24268419_24274898_24275025_24276714_24276811_24278195_24278288_24279216_24279326_24292150
ENSMUSG00000016984.8_0	chr11	-	4169	6	FSM	ENSMUSG00000016984.8	ENSMUST00000076661.7	4185	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGTAAGAGAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	17903865	17888761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_17890351_17895606_17897568_17897774_17897888_17902251_17902329_17902577_17902704_17903562
ENSMUSG00000017002.15_0	chr2	-	853	4	FSM	ENSMUSG00000017002.15	ENSMUST00000109367.10	876	4	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACACCGTGACTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	164198409	164195994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164196234_164196795_164196946_164197370_164197533_164198107
ENSMUSG00000017009.4_0	chr2	-	2445	5	FSM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAGCCTGTCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	164285100	164266173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106_164273234_164285009
ENSMUSG00000017009.4_1	chr2	-	2355	4	ISM	ENSMUSG00000017009.4	ENSMUST00000017153.4	2458	5	11872	7	11872	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAGCCTGTCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	164273234	164266173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_164268158_164270812_164271009_164271599_164271647_164273106
ENSMUSG00000017057.10_0	chrX	+	3696	11	FSM	ENSMUSG00000017057.10	ENSMUST00000033418.8	3712	11	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAAATGCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35375774	35434908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35375929_35390297_35390438_35394256_35394396_35396616_35396738_35404865_35405051_35407663_35407816_35412302_35412351_35412631_35412765_35415670_35415768_35419195_35419281_35432466
ENSMUSG00000017119.21_18	chr11	+	2689	17	FSM	ENSMUSG00000017119.21	ENST00000589872.1	2703	17	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCAGTGTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	101447019	101468859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101447118_101450344_101450429_101455454_101455653_101456529_101456608_101457021_101457237_101457920_101458089_101459224_101459435_101460081_101460242_101460323_101460615_101462109_101462260_101462727_101462804_101463287_101463399_101463633_101463799_101465824_101466243_101467128_101467236_101468019_101468078_101468757
ENSMUSG00000017132.18_1	chr11	-	3151	13	FSM	ENSMUSG00000017132.18	ENSMUST00000017276.14	3135	13	-12	-4	-12	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCATGTTCTGCTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118139398	118054996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440_118084524_118139264
ENSMUSG00000017132.18_5	chr11	-	2603	13	FSM	ENSMUSG00000017132.18	ENST00000361101.8	2608	13	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACTTCATGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118084517	118055001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118055974_118056380_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073041_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440
ENSMUSG00000017132.18_7	chr11	-	2599	13	FSM	ENSMUSG00000017132.18	ENST00000591455.5	2604	13	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACTTCATGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118084517	118055001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118055974_118056380_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222_118083288_118084440
ENSMUSG00000017132.18_8	chr11	-	2523	12	ISM	ENSMUSG00000017132.18	ENST00000591455.5	2604	13	1233	1	1233	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCACTTCATGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118083288	118055001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_118055974_118056380_118056921_118059841_118059997_118061651_118061724_118068045_118068123_118073045_118073158_118073590_118073740_118074707_118074821_118075797_118075879_118076206_118076326_118076585_118076653_118083222
ENSMUSG00000017144.9_0	chr2	-	2813	5	FSM	ENSMUSG00000017144.9	ENSMUST00000017288.9	2828	5	9	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGTCTCTGGGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	51039114	51020455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_51022558_51024094_51024230_51027147_51027258_51038235_51038324_51038736
ENSMUSG00000017146.13_0	chr11	-	6534	23	FSM	ENSMUSG00000017146.13	ENSMUST00000017290.11	6572	23	26	12	26	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGCAAACATTTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	101442679	101379601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101380739_101382684_101382746_101383006_101383081_101384377_101384433_101388759_101388841_101392817_101392859_101393306_101393385_101396142_101396231_101398775_101399057_101400746_101400926_101403545_101403676_101408096_101408269_101413257_101413329_101414150_101417466_101418826_101418904_101420616_101420663_101421817_101421921_101422845_101422986_101424764_101424854_101426353_101426432_101430806_101430861_101439840_101439940_101442594
ENSMUSG00000017176.18_1	chr11	-	1399	9	FSM	ENSMUSG00000017176.18	ENSMUST00000092688.12	1399	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	100331915	100320178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654_100331754_100331869
ENSMUSG00000017176.18_2	chr11	-	1344	8	FSM	ENSMUSG00000017176.18	ENSMUST00000107397.2	1348	8	10	-6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACGCGTCTTTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	100331744	100320178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331654
ENSMUSG00000017176.18_3	chr11	-	1338	8	FSM	ENSMUSG00000017176.18	ENSMUST00000092689.9	1344	8	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATGCACGCGTCTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100331840	100320181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100320776_100321902_100322104_100323743_100323907_100325520_100325611_100326980_100327067_100330865_100330913_100331010_100331081_100331753
ENSMUSG00000017176.18_5	chr11	-	416	3	ISM	ENSMUSG00000017176.18	ENST00000521789.5	513	4	1459	8	1459	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGACCTTGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	100325609	100320611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_100320776_100323743_100323907_100325520
ENSMUSG00000017176.18_6	chr11	-	500	4	FSM	ENSMUSG00000017176.18	ENST00000521789.5	513	4	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGACCTTGCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	100327063	100320611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100320776_100323743_100323907_100325520_100325611_100326980
ENSMUSG00000017188.4_0	chr11	-	872	2	FSM	ENSMUSG00000017188.4	ENSMUST00000017332.4	886	2	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGCTAGTGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101169928	101168795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101169279_101169539
ENSMUSG00000017210.15_0	chr11	-	3410	26	FSM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	98620261	98595416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610_98619814_98620197
ENSMUSG00000017210.15_1	chr11	-	3342	25	ISM	ENSMUSG00000017210.15	ENSMUST00000017354.13	3410	26	452	0	-59	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTGTGGGGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	98619809	98595416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98609643_98609683_98619440_98619524_98619610
ENSMUSG00000017210.15_13	chr11	-	2941	24	FSM	ENSMUSG00000017210.15	ENST00000356271.7	2960	24	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGTCCCAGCCCCATCA	NA	NA	NA	NA	NA	NA	NA	NA	98619737	98595706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98595843_98595944_98596094_98596347_98596429_98597204_98597305_98597651_98597743_98597943_98598126_98598362_98598628_98600407_98600584_98600888_98600989_98601100_98601280_98601598_98601682_98602088_98602127_98603358_98603502_98603979_98604086_98604858_98604946_98605227_98605311_98605906_98605955_98606467_98606582_98606956_98607108_98607239_98607352_98608735_98608969_98609322_98609397_98619440_98619524_98619610
ENSMUSG00000017221.15_0	chr11	+	2135	12	FSM	ENSMUSG00000017221.15	ENSMUST00000017365.15	2148	12	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCCTTGTGCACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	98573388	98586801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98573764_98576307_98576499_98576759_98576898_98578503_98578641_98581288_98581480_98581741_98581846_98584208_98584324_98584404_98584525_98584630_98584735_98584963_98585120_98586188_98586240_98586348
ENSMUSG00000017264.17_0	chr4	+	2768	25	FSM	ENSMUSG00000017264.17	ENSMUST00000017408.14	2790	25	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGAAAGATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	148642896	148666847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148660606_148660682_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUSG00000017264.17_8	chr4	+	2671	24	FSM	ENSMUSG00000017264.17	ENSMUST00000076022.7	2682	24	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAGAAAGATGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	148642918	148666847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148643036_148644004_148644142_148645469_148645594_148646763_148646869_148647169_148647336_148647477_148647593_148648300_148648377_148648569_148648681_148649056_148649201_148649660_148649852_148650735_148650893_148652823_148652973_148653107_148653159_148654843_148654956_148657375_148657427_148657567_148657647_148657734_148657842_148660265_148660362_148662874_148662963_148663837_148663915_148664815_148664988_148665558_148665621_148666214_148666292_148666740
ENSMUSG00000017286.16_2	chr11	-	1411	9	FSM	ENSMUSG00000017286.16	ENSMUST00000017430.12	1434	9	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	76134541	76112348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380
ENSMUSG00000017286.16_7	chr11	-	1601	10	FSM	ENSMUSG00000017286.16	ENST00000536578.5	1619	10	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAGCACTTACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	76135359	76112781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76112858_76123847_76123935_76124027_76124142_76124725_76124813_76125214_76125352_76128494_76128640_76130277_76130399_76131698_76131749_76134380_76134908_76135102
ENSMUSG00000017288.16_0	chr11	-	2819	22	FSM	ENSMUSG00000017288.16	ENSMUST00000056601.11	2833	22	9	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATCTCCATCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	76070464	75937056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75937409_75937890_75937996_75939265_75939404_75953810_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76029133_76029221_76054623_76054691_76057024_76057075_76065452_76065534_76070238
ENSMUSG00000017288.16_12	chr11	-	1881	16	FSM	ENSMUSG00000017288.16	ENST00000680128.1	1900	16	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGGTAAGGCAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	76070332	75953817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017288.16_13	chr11	-	1789	15	ISM	ENSMUSG00000017288.16	ENST00000680128.1	1900	16	4807	9	4807	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGGTAAGGCAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	76065535	75953817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_75953881_75957566_75957716_75967260_75967340_75967865_75967949_75971972_75972121_75973267_75973511_75983046_75983142_75992812_75992915_76004766_76004909_76007884_76008028_76008487_76008632_76012343_76012423_76025234_76025355_76027024_76027141_76065452
ENSMUSG00000017288.16_24	chr11	-	415	4	FSM	ENSMUSG00000017288.16	ENST00000679961.1	425	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTAAGATATCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	76070340	76025238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76025355_76027024_76027141_76065452_76065534_76070238
ENSMUSG00000017288.16_26	chr11	-	628	2	FSM	ENSMUSG00000017288.16	ENSMUST00000129256.2	650	2	7	15	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTACTTATTTACT	NA	NA	NA	NA	NA	NA	NA	NA	76070457	76067799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76068209_76070238
ENSMUSG00000017291.14_0	chr11	-	12398	20	FSM	ENSMUSG00000017291.14	ENSMUST00000058496.8	12409	20	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACACAGTGTCTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	77498639	77419996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098_77476321_77498033
ENSMUSG00000017291.14_1	chr11	-	11799	19	FSM	ENSMUSG00000017291.14	ENSMUST00000017435.11	11813	19	5	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACACAGTGTCTGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	77476327	77419996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77436114_77436355_77440097_77440302_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUSG00000017291.14_16	chr11	-	3818	17	FSM	ENSMUSG00000017291.14	ENST00000536202.1	3830	17	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACCTTATGAATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	77476311	77427517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77429155_77430879_77431063_77432450_77432664_77441697_77441827_77444498_77444736_77446389_77446525_77450567_77450772_77451079_77451248_77454489_77454572_77456571_77456666_77462432_77462525_77464521_77464636_77466398_77466496_77468148_77468195_77469551_77469654_77470599_77470672_77476098
ENSMUSG00000017299.14_0	chr2	+	1645	13	FSM	ENSMUSG00000017299.14	ENSMUST00000017443.14	1664	13	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCATCAGATCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	164587911	164610517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164588079_164588626_164588698_164589382_164589480_164596029_164596129_164599309_164599379_164599602_164599657_164599920_164599980_164601171_164601218_164604988_164605048_164605140_164605202_164607080_164607153_164609626_164609683_164609782
ENSMUSG00000017300.10_0	chr2	-	685	6	FSM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAAAGCTGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	164621656	164619090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164619254_164619391_164619529_164619650_164619766_164619863_164620008_164620095_164620148_164621582
ENSMUSG00000017300.10_1	chr2	-	612	5	ISM	ENSMUSG00000017300.10	ENSMUST00000103095.5	700	6	1513	10	1513	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGTAAAGCTGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	164620148	164619090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_164619254_164619391_164619529_164619650_164619766_164619863_164620008_164620095
ENSMUSG00000017307.17_0	chr2	-	1139	6	FSM	ENSMUSG00000017307.17	ENSMUST00000103094.11	1152	6	4	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGGAGTAGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	164646798	164634696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164634931_164636904_164637100_164637571_164637730_164641639_164641866_164644916_164645054_164646609
ENSMUSG00000017314.13_0	chr11	-	4082	13	FSM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTTCTGGCTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101979341	101947847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125_101976189_101979245
ENSMUSG00000017314.13_1	chr11	-	3987	12	ISM	ENSMUSG00000017314.13	ENSMUST00000017458.11	4089	13	3152	7	-2879	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTTCTGGCTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101976189	101947847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101950320_101951246_101951376_101951592_101951796_101952321_101952484_101952726_101952796_101952880_101952987_101953076_101953209_101954013_101954242_101955119_101955270_101955394_101955548_101971478_101971598_101976125
ENSMUSG00000017376.16_1	chr11	-	948	2	FSM	ENSMUSG00000017376.16	ENST00000582037.2	969	2	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGGACTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78587117	78581206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78581672_78586634
ENSMUSG00000017386.11_0	chr11	-	2061	7	FSM	ENSMUSG00000017386.11	ENSMUST00000017530.4	2078	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGATTCCAGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78056405	78050232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78051375_78051618_78051775_78051858_78052021_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ENSMUSG00000017386.11_8	chr11	-	603	5	FSM	ENSMUSG00000017386.11	ENST00000262396.10	618	5	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGAGCCTTTTGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	78056282	78050742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78050868_78052112_78052275_78052343_78052449_78053207_78053260_78056123
ENSMUSG00000017390.16_0	chr11	+	2773	9	FSM	ENSMUSG00000017390.16	ENSMUST00000017534.15	2786	9	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAAAAGTTACCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78213796	78218597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78214049_78215215_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017390.16_2	chr11	+	1479	9	FSM	ENSMUSG00000017390.16	ENST00000395321.6	1493	9	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGAACATGTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	78213916	78217400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78214049_78215192_78215340_78215429_78215642_78215734_78215790_78215874_78216036_78216154_78216239_78216467_78216643_78216760_78216961_78217087
ENSMUSG00000017400.11_0	chr11	-	3039	11	FSM	ENSMUSG00000017400.11	ENSMUST00000017544.9	3050	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTGCTTGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	97944278	97927449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97928897_97930444_97930583_97930923_97930976_97931247_97931346_97931964_97932027_97932129_97932203_97932292_97932406_97933354_97933446_97933582_97933681_97934305_97934613_97943718
ENSMUSG00000017404.13_0	chr11	+	733	6	FSM	ENSMUSG00000017404.13	ENSMUST00000092425.11	737	6	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTTTGGCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97917536	97921315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97917589_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017404.13_12	chr11	+	677	5	ISM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	903	3	903	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTTTGGCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97918652	97921315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017404.13_3	chr11	+	746	6	FSM	ENSMUSG00000017404.13	ENSMUST00000017548.7	751	6	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTTTTGGCTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97917751	97921315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97917817_97918648_97918756_97919171_97919295_97920220_97920342_97920600_97920712_97921096
ENSMUSG00000017405.15_1	chr11	-	2792	15	FSM	ENSMUSG00000017405.15	ENSMUST00000017549.13	2809	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTGCTTGGCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	78067491	78056938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78057604_78057975_78058135_78058288_78058448_78058548_78058713_78058917_78059069_78059797_78059916_78060197_78060275_78061203_78061355_78061438_78061621_78061698_78061779_78061915_78062125_78062936_78063069_78063276_78063510_78063750_78063957_78067385
ENSMUSG00000017412.16_0	chr2	-	4431	14	FSM	ENSMUSG00000017412.16	ENST00000638005.1	4448	14	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTCTATGAGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	52566196	52321733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52565739_52565824_52566032
ENSMUSG00000017412.16_21	chr2	-	2152	14	FSM	ENSMUSG00000017412.16	ENST00000439467.6	2169	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGTTGAAATCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	52446655	52324077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52446502
ENSMUSG00000017412.16_3	chr2	-	3651	14	FSM	ENSMUSG00000017412.16	ENST00000637762.1	3668	14	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTGATACAGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52448537	52322715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357366_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_31	chr2	-	2119	13	FSM	ENSMUSG00000017412.16	ENST00000397327.7	2139	13	10	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAACCAATTCCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	52448548	52324129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017412.16_47	chr2	-	1774	13	FSM	ENSMUSG00000017412.16	ENST00000427385.6	1787	13	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCCGTGTAGGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	52566358	52324179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52345611_52345722_52354621_52354681_52355609_52355691_52355905_52355926_52357255_52357333_52359488_52359620_52367703_52367824_52565739_52565824_52566282
ENSMUSG00000017412.16_54	chr2	-	1776	10	FSM	ENSMUSG00000017412.16	ENST00000637779.1	1794	10	13	5	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGTACTTATCAAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	52448536	52324207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52339961_52340058_52341880_52342033_52355609_52355691_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52448280
ENSMUSG00000017412.16_55	chr2	-	1766	9	FSM	ENSMUSG00000017412.16	ENST00000636380.1	1782	9	10	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAGGGTACTTATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	52448548	52324212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52324762_52326897_52327084_52341880_52342033_52357255_52357333_52359488_52359620_52364874_52364998_52367703_52367824_52446213_52446374_52448280
ENSMUSG00000017418.15_0	chr2	+	6927	6	FSM	ENSMUSG00000017418.15	ENSMUST00000017562.13	6933	6	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGAAGTGTAGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15054207	15087259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_15054497_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ENSMUSG00000017418.15_1	chr2	+	3628	6	FSM	ENSMUSG00000017418.15	ENSMUST00000239125.2	3608	6	-20	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCTTCTCAACATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	15060113	15083977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_15060386_15072949_15073011_15074630_15074779_15077934_15078019_15079772_15079925_15081066
ENSMUSG00000017421.19_0	chr11	+	2295	11	FSM	ENSMUSG00000017421.19	ENSMUST00000165565.8	2311	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATACAGTTTTGATACA	NA	NA	NA	NA	NA	NA	NA	NA	80274114	80287065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80282156_80282228_80282660_80282819_80283909_80284003_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017421.19_13	chr11	+	2226	11	FSM	ENSMUSG00000017421.19	ENSMUST00000017567.14	2245	11	10	9	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATACAGTTTTGATACA	NA	NA	NA	NA	NA	NA	NA	NA	80274138	80287065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80274322_80276728_80276856_80278627_80278767_80279803_80279972_80280080_80280157_80280599_80280648_80282156_80282228_80282660_80282819_80285111_80285358_80285927_80286088_80286215
ENSMUSG00000017428.17_0	chr11	+	1617	13	FSM	ENSMUSG00000017428.17	ENSMUST00000173938.8	1626	13	9	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80319457	80362735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277
ENSMUSG00000017428.17_1	chr11	+	2834	14	FSM	ENSMUSG00000017428.17	ENSMUST00000017572.14	2848	14	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGTCCTTTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	80319460	80364070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80319582_80322530_80322633_80329076_80329202_80336067_80336140_80336739_80336798_80347065_80347261_80351421_80351567_80353436_80353498_80355839_80355903_80360627_80360754_80361208_80361245_80361451_80361504_80362277_80362421_80362535
ENSMUSG00000017446.15_0	chr11	+	2523	4	FSM	ENSMUSG00000017446.15	ENSMUST00000017590.9	2532	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGCAAGCTGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	118319324	118340780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118319395_118334517_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_1	chr11	+	2502	4	FSM	ENSMUSG00000017446.15	ENSMUST00000106286.3	2512	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCAAGCTGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	118324678	118340779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118324729_118334517_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_2	chr11	+	1140	4	FSM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGACACTCCTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	118327573	118339174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118327826_118334476_118334677_118337326_118337467_118338626
ENSMUSG00000017446.15_5	chr11	+	2446	3	ISM	ENSMUSG00000017446.15	ENST00000581774.5	1155	4	6962	-1602	6962	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACAGCAAGCTGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	118334523	118340779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_118334677_118337326_118337467_118338626
ENSMUSG00000017466.10_0	chr11	-	3690	5	FSM	ENSMUSG00000017466.10	ENSMUST00000017610.10	3709	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTATCAAAGAGAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	118246321	118191902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118194723_118201401_118201527_118208244_118208354_118210934_118211036_118245786
ENSMUSG00000017478.16_0	chr8	+	3785	19	FSM	ENSMUSG00000017478.16	ENSMUST00000017622.12	3810	19	19	6	-15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCACTTTCTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	123103366	123144092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ENSMUSG00000017478.16_2	chr8	+	3681	18	FSM	ENSMUSG00000017478.16	ENSMUST00000093073.12	3705	18	17	7	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCACTTTCTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	123103398	123144092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123138376_123138443_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ENSMUSG00000017478.16_3	chr8	+	3666	18	FSM	ENSMUSG00000017478.16	ENSMUST00000176629.8	3672	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGCACTTTCTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	123103419	123144092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123103540_123110138_123110744_123113600_123113686_123114431_123114504_123124556_123124706_123124974_123125068_123125743_123125902_123128329_123128448_123129889_123130159_123134070_123134263_123134981_123135108_123137619_123137725_123138022_123138167_123139728_123139890_123140001_123140202_123140595_123140690_123142774_123142872_123143214
ENSMUSG00000017485.12_0	chr14	-	10322	36	FSM	ENSMUSG00000017485.12	ENSMUST00000017629.12	10335	36	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAATATCTATTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	6104575	6034304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_6039465_6040330_6040426_6041163_6041290_6044297_6044409_6045984_6046065_6046939_6047142_6048898_6049061_6049277_6049423_6051231_6051427_6052727_6052812_6053050_6053207_6055769_6055862_6056006_6056203_6056643_6056845_6057572_6057708_6059737_6059970_6060445_6060595_6060814_6060937_6062357_6062473_6062558_6062652_6062923_6063034_6069266_6069373_6069635_6069747_6070728_6070855_6070998_6071157_6071841_6071981_6074033_6074172_6074254_6074357_6076430_6076605_6079783_6079997_6081275_6081374_6082344_6082491_6083608_6083673_6085215_6085307_6086545_6086702_6104036
ENSMUSG00000017493.13_0	chr11	+	3813	4	FSM	ENSMUSG00000017493.13	ENSMUST00000017637.13	3831	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACTGCCTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	98932080	98945211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98932672_98939051_98939198_98939919_98940055_98942270
ENSMUSG00000017499.16_0	chr11	+	4593	12	FSM	ENSMUSG00000017499.16	ENSMUST00000092706.13	4614	12	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCAACCCCAAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	98798639	98814754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98798808_98799462_98799657_98801012_98801298_98801403_98801604_98802213_98802390_98802984_98803092_98804700_98804841_98805913_98806015_98807779_98807845_98810028_98810232_98811498_98811640_98811941
ENSMUSG00000017548.16_0	chr11	+	4367	16	FSM	ENSMUSG00000017548.16	ENSMUST00000017692.15	4373	16	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGGTCTGCATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	79883936	79924948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79884426_79886442_79886490_79886570_79886636_79889882_79889952_79898338_79898389_79901383_79901470_79904189_79904422_79905968_79906063_79910504_79910611_79912917_79913096_79915735_79915828_79915993_79916138_79916622_79916781_79919973_79920173_79920832_79920913_79922670
ENSMUSG00000017548.16_1	chr11	+	404	5	FSM	ENSMUSG00000017548.16	ENST00000578070.5	416	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAATGATGATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	79889882	79906118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79889952_79901383_79901470_79904189_79904224_79904356_79904422_79905968
ENSMUSG00000017548.16_2	chr11	+	335	4	ISM	ENSMUSG00000017548.16	ENST00000578070.5	416	5	11504	9	11504	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAAATGATGATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	79901383	79906118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_79901470_79904189_79904224_79904356_79904422_79905968
ENSMUSG00000017550.15_0	chr11	+	7270	23	FSM	ENSMUSG00000017550.15	ENSMUST00000017694.7	7272	23	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTATGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79980227	80026617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003664_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ENSMUSG00000017550.15_1	chr11	+	7263	23	FSM	ENSMUSG00000017550.15	ENSMUST00000108239.7	7266	23	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATTTATGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79980225	80026617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79980663_79984980_79986849_79988778_79988876_79991139_79991302_79992607_79992735_79994085_79994168_79997079_79997265_79999308_79999464_80000189_80000350_80000772_80000962_80002300_80002398_80003574_80003655_80003900_80004041_80004981_80005133_80009790_80009968_80010292_80010430_80011507_80011602_80014892_80014958_80018082_80018264_80022029_80022209_80023290_80024133_80024854_80025014_80025118
ENSMUSG00000017561.17_0	chr11	-	2370	8	FSM	ENSMUSG00000017561.17	ENSMUST00000061283.15	2396	8	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAAATTAACAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	79971808	79937335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79938564_79939417_79939531_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUSG00000017561.17_2	chr11	-	2203	7	FSM	ENSMUSG00000017561.17	ENSMUST00000103233.10	2230	7	0	27	0	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAATGAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	79971764	79937345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79938564_79947277_79947411_79948617_79948841_79950025_79950204_79950923_79951012_79955017_79955226_79971609
ENSMUSG00000017615.13_0	chr11	-	3754	7	FSM	ENSMUSG00000017615.13	ENSMUST00000108277.3	3768	7	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	78427144	78413675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426911
ENSMUSG00000017615.13_1	chr11	-	3711	7	FSM	ENSMUSG00000017615.13	ENSMUST00000017759.9	3720	7	9	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCTGTTCCCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	78427088	78413675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78420853_78421174_78426898
ENSMUSG00000017615.13_2	chr11	-	1061	7	FSM	ENSMUSG00000017615.13	ENST00000544907.6	1076	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAAGCTTTTTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	78427080	78415294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78415337_78416026_78416368_78418351_78418548_78419076_78419130_78419215_78419306_78419895_78420066_78426911
ENSMUSG00000017631.20_0	chr11	-	5171	22	FSM	ENSMUSG00000017631.20	ENSMUST00000094012.11	5236	22	55	10	55	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCAGCCCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	76400190	76307569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713
ENSMUSG00000017631.20_2	chr11	-	5377	23	FSM	ENSMUSG00000017631.20	ENSMUST00000072740.13	5394	23	7	10	7	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACTCAGCCCCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	76462354	76307569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76342678_76342811_76343156_76343255_76345341_76345417_76346434_76346540_76346986_76347063_76347425_76347549_76350006_76350173_76352118_76352241_76354353_76354495_76355063_76355117_76359541_76359603_76363314_76363423_76369820_76370007_76377263_76377363_76399713_76399899_76461856
ENSMUSG00000017631.20_4	chr11	-	948	8	FSM	ENSMUSG00000017631.20	ENST00000543210.6	958	8	6	4	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGGGTGGGCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76327935	76309931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76310020_76310560_76310709_76312978_76313085_76313873_76314009_76314859_76315000_76315739_76315850_76316092_76316153_76327774
ENSMUSG00000017631.20_5	chr11	-	361	4	FSM	ENSMUSG00000017631.20	ENST00000572441.5	373	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCATAGAAGAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76327930	76314964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76315000_76315739_76315850_76316092_76316153_76327774
ENSMUSG00000017631.20_6	chr11	-	334	3	ISM	ENSMUSG00000017631.20	ENST00000572441.5	373	4	4	775	4	-775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGCTGTCTTGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	76327937	76315738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_76315850_76316092_76316153_76327774
ENSMUSG00000017639.14_0	chr11	+	1889	13	FSM	ENSMUSG00000017639.14	ENST00000394744.6	1899	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGACGAAGAAAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	79551420	79583720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79551683_79571613_79571838_79574166_79574362_79575048_79575184_79575426_79575463_79575853_79575954_79576211_79576316_79577377_79577519_79580440_79580523_79581283_79581422_79581497_79581654_79582581_79582726_79583548
ENSMUSG00000017652.17_0	chr2	+	2969	9	FSM	ENSMUSG00000017652.17	ENSMUST00000017799.12	2986	9	14	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAACAGAAGATTCATA	NA	NA	NA	NA	NA	NA	NA	NA	164897560	164914865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164897679_164904205_164904285_164904580_164904707_164904941_164905089_164905387_164905482_164908422_164908485_164911548_164911636_164911736_164911769_164912641
ENSMUSG00000017664.17_0	chr2	-	1996	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109300.9	2008	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	165129781	165118477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125524_165129703
ENSMUSG00000017664.17_1	chr2	-	1921	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	165129674	165118477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125456_165129603
ENSMUSG00000017664.17_2	chr2	-	1915	9	ISM	ENSMUSG00000017664.17	ENSMUST00000109299.8	1926	10	4155	4	4155	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	165125520	165118477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168
ENSMUSG00000017664.17_3	chr2	-	1979	10	FSM	ENSMUSG00000017664.17	ENSMUST00000109298.8	1991	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	165129667	165118477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125521_165129603
ENSMUSG00000017664.17_4	chr2	-	1835	11	FSM	ENSMUSG00000017664.17	ENSMUST00000017808.14	1843	11	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGCCTCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	165129743	165118477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165119194_165119371_165119502_165120160_165120337_165122536_165122621_165122705_165122875_165123227_165123301_165124000_165124065_165124702_165124854_165125168_165125328_165125447_165125521_165129703
ENSMUSG00000017667.10_0	chr2	-	8186	5	FSM	ENSMUSG00000017667.10	ENSMUST00000103084.4	8205	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCAGTCTGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	165230168	165216191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165223807_165224610_165224704_165225158_165225286_165228845_165228909_165229880
ENSMUSG00000017670.17_0	chr2	-	4667	21	FSM	ENSMUSG00000017670.17	ENSMUST00000103091.9	4695	21	22	6	22	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTCCCTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	165162724	165129956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165162579
ENSMUSG00000017670.17_3	chr2	-	3459	21	FSM	ENSMUSG00000017670.17	ENSMUST00000094329.11	3466	21	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGACTGCTTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	165168397	165131079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUSG00000017670.17_37	chr2	-	2145	20	FSM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGAGCGGGAAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	165158231	165132287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158
ENSMUSG00000017670.17_38	chr2	-	2080	19	ISM	ENSMUSG00000017670.17	ENST00000352077.6	2157	20	276	1	276	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGAAGGGACTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	165157960	165132281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152189_165153542_165153725_165156650_165156702_165157523_165157597_165157917
ENSMUSG00000017670.17_5	chr2	-	3486	22	FSM	ENSMUSG00000017670.17	ENSMUST00000074046.13	3502	22	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGACTGCTTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	165168388	165131079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165145585_165145622_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158_165158272_165168337
ENSMUSG00000017670.17_7	chr2	-	3397	20	ISM	ENSMUSG00000017670.17	ENSMUST00000103091.9	4695	21	4477	1129	-33	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGACTGCTTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	165158269	165131079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_165132482_165134024_165134103_165136160_165136244_165136933_165137042_165137163_165137277_165137382_165137547_165138760_165138898_165139266_165139376_165139460_165139566_165140128_165140264_165140539_165140663_165143860_165143912_165146819_165146899_165150832_165150985_165152094_165152195_165153542_165153725_165156650_165156702_165157523_165157597_165157917_165157959_165158158
ENSMUSG00000017677.12_0	chr11	-	2464	9	FSM	ENSMUSG00000017677.12	ENSMUST00000017821.12	2476	9	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCTTTCATGGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	79145488	79130200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79139216_79139486_79141806_79141976_79145178
ENSMUSG00000017677.12_3	chr11	-	1380	7	FSM	ENSMUSG00000017677.12	ENST00000348811.6	1392	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTAGAGCAAATTCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	79145420	79130778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79131289_79131513_79131622_79132420_79132535_79132809_79132983_79135288_79135390_79136995_79137128_79145178
ENSMUSG00000017679.17_0	chr2	+	4506	5	FSM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	9	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGAGTGCATTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	163444242	163460925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163444335_163449128_163449595_163453678_163453873_163455654_163455766_163457282
ENSMUSG00000017679.17_2	chr2	+	4415	4	ISM	ENSMUSG00000017679.17	ENSMUST00000171696.8	4522	5	4894	7	4886	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGAGTGCATTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	163449127	163460925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_163449595_163453678_163453873_163455654_163455766_163457282
ENSMUSG00000017686.18_1	chr11	+	4245	20	FSM	ENSMUSG00000017686.18	ENSMUST00000055056.16	4260	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAAATGCCACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80099889	80158727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80148339_80148463_80156567
ENSMUSG00000017686.18_15	chr11	+	3018	20	FSM	ENSMUSG00000017686.18	ENSMUST00000017831.16	3029	20	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTGACCTTTTCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	80099951	80157589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80146687_80146784_80156567
ENSMUSG00000017686.18_5	chr11	+	3670	19	FSM	ENSMUSG00000017686.18	ENSMUST00000092857.13	3687	19	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATACACTTTTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80099922	80158308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80100150_80111083_80111143_80114728_80114811_80116411_80116456_80116888_80116943_80118105_80118159_80124207_80124317_80124754_80124857_80132846_80132946_80133398_80133508_80134195_80134317_80136827_80136913_80137492_80137639_80139263_80139365_80141033_80141165_80141868_80141953_80143792_80143913_80145485_80145689_80156567
ENSMUSG00000017688.15_0	chr3	+	1086	8	FSM	ENSMUSG00000017688.15	ENST00000430567.2	1092	8	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGGCTTCCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	3706273	3722235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_3706378_3708023_3708131_3709595_3709752_3713093_3713182_3716331_3716485_3716607_3716842_3717896_3718020_3722114
ENSMUSG00000017692.9_0	chr11	+	1737	8	FSM	ENSMUSG00000017692.9	ENST00000269051.9	1750	8	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTCCCTCTCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	80191716	80244766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80192098_80210364_80210543_80214184_80214410_80221382_80221532_80222620_80222734_80228312_80228414_80237651_80237713_80244237
ENSMUSG00000017697.4_0	chr2	-	1674	12	FSM	ENSMUSG00000017697.4	ENSMUST00000017841.4	1688	12	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATATGGGTGTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	163592149	163568507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163568969_163569463_163569564_163570036_163570167_163571931_163571997_163572217_163572320_163572400_163572473_163573024_163573153_163574176_163574293_163574773_163574918_163577268_163577392_163580082_163580145_163591978
ENSMUSG00000017697.4_2	chr2	-	783	7	FSM	ENSMUSG00000017697.4	ENST00000537820.1	800	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTCAAGCGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	163577383	163570053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163570167_163571931_163571997_163572217_163572320_163573024_163573153_163574176_163574293_163574773_163574918_163577268
ENSMUSG00000017707.10_0	chr2	-	3675	10	FSM	ENSMUSG00000017707.10	ENSMUST00000017851.4	3683	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATGATACCTTAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	163487044	163465192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163467500_163468172_163468398_163469791_163469973_163471046_163471138_163472845_163473016_163474025_163474164_163476354_163476435_163478730_163478925_163481085_163481248_163486917
ENSMUSG00000017715.12_1	chr11	+	2844	10	FSM	ENSMUSG00000017715.12	ENSMUST00000132676.8	2863	10	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGGCTGTTGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	117877128	117914829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910559_117914230
ENSMUSG00000017715.12_3	chr11	+	1815	10	FSM	ENSMUSG00000017715.12	ENST00000262764.11	1815	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGGGGAGGCAGAACCCA	NA	NA	NA	NA	NA	NA	NA	NA	117877688	117914356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117877840_117888266_117888457_117891024_117891103_117892441_117892542_117893176_117893367_117894166_117894346_117896195_117896718_117905399_117905549_117910432_117910563_117914230
ENSMUSG00000017716.16_0	chr11	+	926	4	FSM	ENSMUSG00000017716.16	ENSMUST00000081387.11	947	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGGACTGTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	117740088	117746549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117740288_117740579_117740690_117743488_117743607_117746050
ENSMUSG00000017718.16_0	chr11	+	2312	11	FSM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACATAACTGGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117716754	117730724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117716833_117718904_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ENSMUSG00000017718.16_3	chr11	+	2236	10	ISM	ENSMUSG00000017718.16	ENSMUST00000073388.13	2327	11	2153	10	2153	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACATAACTGGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	117718902	117730724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_117718996_117723170_117723276_117723353_117723403_117725592_117725679_117725771_117725845_117725970_117726069_117726328_117726408_117726491_117726634_117727233_117727339_117729318
ENSMUSG00000017721.16_0	chr2	+	2550	12	FSM	ENSMUSG00000017721.16	ENSMUST00000103101.11	2562	12	11	1	-4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCGTTGCTTCCTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	164339450	164350220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017721.16_1	chr2	+	1688	9	FSM	ENSMUSG00000017721.16	ENSMUST00000117066.8	1712	9	13	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACACAAACACATCACTG	NA	NA	NA	NA	NA	NA	NA	NA	164339467	164345029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164339678_164339785_164339964_164341714_164341843_164342110_164342212_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397
ENSMUSG00000017721.16_2	chr2	+	1338	9	FSM	ENSMUSG00000017721.16	ENST00000640210.1	1349	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGGCGTGCCCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	164339480	164349445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164339678_164342351_164342439_164343000_164343089_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017721.16_4	chr2	+	1069	7	FSM	ENSMUSG00000017721.16	ENST00000545755.3	1079	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCGGCGTGCCCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	164339574	164349445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164339678_164343193_164343292_164343404_164343571_164344397_164344599_164348302_164348469_164348569_164348654_164349194
ENSMUSG00000017724.15_1	chr11	-	2373	13	FSM	ENSMUSG00000017724.15	ENSMUST00000017868.7	2395	13	22	0	22	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGCTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	101676175	101660572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
ENSMUSG00000017724.15_12	chr11	-	2088	12	FSM	ENSMUSG00000017724.15	ENST00000538265.5	2092	12	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTTCTATTTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101675687	101660576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675615
ENSMUSG00000017724.15_13	chr11	-	2017	11	ISM	ENSMUSG00000017724.15	ENST00000538265.5	2092	12	541	0	345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTTTCTATTTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	101675150	101660576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665072_101666143_101666271_101667918_101667973_101674792_101674841_101675055
ENSMUSG00000017724.15_2	chr11	-	2372	13	FSM	ENSMUSG00000017724.15	ENSMUST00000107176.8	2377	13	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTATTTGCTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	101676192	101660572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101664906_101665054_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342_101675454_101675933
ENSMUSG00000017724.15_36	chr11	-	1554	11	FSM	ENSMUSG00000017724.15	ENST00000545089.5	1571	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGGAGGCAGGCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	101675487	101661018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101661417_101661794_101661897_101662153_101662327_101662514_101662584_101662706_101662782_101664434_101664704_101666143_101666271_101667918_101667973_101674792_101674841_101675055_101675150_101675342
ENSMUSG00000017734.16_0	chr2	+	1031	4	FSM	ENSMUSG00000017734.16	ENSMUST00000109350.9	1055	4	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCATTTCACCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	164328041	164332679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164328164_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000017734.16_1	chr2	+	1634	4	FSM	ENSMUSG00000017734.16	ENSMUST00000069385.15	1658	4	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAAGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	164328382	164333179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164328608_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000017734.16_2	chr2	+	3571	4	FSM	ENSMUSG00000017734.16	ENSMUST00000109349.9	3597	4	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGATTGAGTTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	164328815	164335232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164328925_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000017747.14_0	chr11	-	2443	9	FSM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATATATAAATATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100661777	100656870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895_100661177_100661704
ENSMUSG00000017747.14_1	chr11	-	2363	8	ISM	ENSMUSG00000017747.14	ENSMUST00000017891.14	2462	9	608	19	7	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAATATATATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	100661175	100656876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_100657851_100658109_100658196_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895
ENSMUSG00000017747.14_4	chr11	-	1685	8	FSM	ENSMUSG00000017747.14	ENST00000428494.6	1703	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCTAACCAAGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	100661171	100657637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100657851_100658109_100658283_100658839_100658974_100659043_100659116_100659210_100659404_100659853_100660356_100660481_100660604_100660895
ENSMUSG00000017754.14_0	chr2	-	2220	15	FSM	ENSMUSG00000017754.14	ENSMUST00000109316.8	2226	15	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	164699456	164681437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806
ENSMUSG00000017754.14_11	chr2	-	1226	13	FSM	ENSMUSG00000017754.14	ENST00000420868.2	1244	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAACTGAAGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	164698901	164681591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164698623_164698724_164698806
ENSMUSG00000017754.14_4	chr2	-	1800	16	FSM	ENSMUSG00000017754.14	ENSMUST00000059954.14	1809	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTCTCTAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	164699622	164681437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164681749_164682033_164682111_164682240_164682305_164682414_164682458_164686354_164686423_164686514_164686680_164688513_164688574_164688659_164688837_164693432_164693525_164694392_164694457_164694536_164694601_164696185_164696342_164696846_164696976_164698623_164698724_164698806_164698918_164699503
ENSMUSG00000017756.10_0	chr13	+	5124	24	FSM	ENSMUSG00000017756.10	ENSMUST00000017900.9	5142	24	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAACTTCGTGTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	73911827	73964867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73912010_73932637_73932733_73933162_73933286_73936683_73936831_73938059_73938115_73938768_73938900_73940668_73940911_73942042_73942255_73943216_73943385_73943722_73943822_73944885_73944944_73945645_73945821_73946537_73946657_73947061_73947161_73947731_73947852_73948503_73948609_73949046_73949216_73953532_73953729_73954147_73954318_73954424_73954557_73957103_73957212_73958024_73958204_73961657_73961792_73962961
ENSMUSG00000017760.17_13	chr2	+	1608	13	FSM	ENSMUSG00000017760.17	ENST00000678443.1	1625	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATGGTTGACTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	164675983	164681457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101_164679178_164679276_164679417_164679996_164680073_164680764_164680870_164681070
ENSMUSG00000017760.17_15	chr2	+	1736	14	FSM	ENSMUSG00000017760.17	ENST00000372459.7	1752	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCAACTGGGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	164675983	164681495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_2	chr2	+	3636	16	FSM	ENSMUSG00000017760.17	ENSMUST00000103092.9	3646	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGCTCAGTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	164674830	164682952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164675117_164675643_164675771_164675949_164676129_164676239_164676352_164676617_164676669_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164678998_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017760.17_5	chr2	+	1777	14	FSM	ENSMUSG00000017760.17	ENST00000354880.9	1783	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCAACTGGGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	164675712	164681495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164675771_164675949_164676129_164676239_164676352_164676757_164676845_164677075_164677232_164677549_164677642_164678346_164678432_164678905_164679002_164679101_164679178_164679276_164679417_164679996_164680073_164680560_164680651_164680764_164680870_164681070
ENSMUSG00000017764.3_0	chr2	+	2689	2	FSM	ENSMUSG00000017764.3	ENSMUST00000017908.3	2705	2	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGTGTCTTGTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	164664620	164668790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164665121_164666601
ENSMUSG00000017765.18_0	chr8	-	3750	24	FSM	ENSMUSG00000017765.18	ENSMUST00000116429.9	3755	24	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGCTCCGGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	106692671	106670221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692556
ENSMUSG00000017765.18_2	chr8	-	3799	24	FSM	ENSMUSG00000017765.18	ENSMUST00000034370.17	3811	24	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCTGCTCCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	106692717	106670224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106692550
ENSMUSG00000017765.18_9	chr8	-	3570	24	FSM	ENSMUSG00000017765.18	ENST00000541864.6	3585	24	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTTCAGAAAGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	106691134	106670395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106670806_106670906_106671041_106671153_106671339_106671766_106671875_106671971_106672104_106672192_106672363_106672476_106672673_106673322_106673492_106673688_106673794_106674124_106674245_106674484_106674584_106675769_106675889_106676285_106676461_106676828_106676887_106677136_106677236_106677327_106677493_106678053_106678269_106678411_106678654_106680439_106680571_106682058_106682114_106682212_106682360_106685989_106686122_106687307_106687403_106691025
ENSMUSG00000017774.20_0	chr11	+	4631	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102505.10	4652	32	12	9	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCCAACACAGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	75541341	75564727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75541591_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_20	chr11	+	4651	32	FSM	ENSMUSG00000017774.20	ENSMUST00000102504.10	4659	32	6	2	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75542907	75564734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75543170_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_28	chr11	+	4528	32	FSM	ENSMUSG00000017774.20	ENST00000575158.5	4539	32	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75546534	75564734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75546674_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_52	chr11	+	4703	32	FSM	ENSMUSG00000017774.20	ENSMUST00000108431.3	4718	32	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75546713	75564734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75547028_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017774.20_6	chr11	+	4537	32	FSM	ENSMUSG00000017774.20	ENSMUST00000069057.13	4547	32	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGTCTTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75542343	75564734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75542492_75548317_75548474_75548578_75548695_75549177_75549377_75549464_75549546_75550996_75551177_75551258_75551358_75551724_75551839_75551922_75551995_75552320_75552441_75552559_75552643_75552847_75552954_75553060_75553142_75553397_75553490_75556343_75556439_75556518_75556566_75556662_75556744_75559006_75559113_75559235_75559354_75559833_75559948_75560023_75560101_75560606_75560676_75560772_75560858_75560956_75561117_75561368_75561453_75562018_75562113_75562205_75562262_75562412_75562549_75562630_75562702_75562783_75562882_75562977_75563078_75563435
ENSMUSG00000017776.16_0	chr11	+	3619	3	FSM	ENSMUSG00000017776.16	ENSMUST00000017920.14	3642	3	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGTATGGCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	75570094	75596878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75570491_75583022_75583559_75594191
ENSMUSG00000017776.16_1	chr11	+	4274	3	FSM	ENSMUSG00000017776.16	ENSMUST00000108425.8	4290	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCTTTACTATGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	75570120	75597729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75570491_75583022_75583389_75594191
ENSMUSG00000017778.15_0	chr13	-	517	3	FSM	ENSMUSG00000017778.15	ENSMUST00000131011.2	540	3	10	13	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACATAAAGATTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	86195013	86192947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_86193028_86193845_86193989_86194719
ENSMUSG00000017781.18_0	chr11	+	3732	11	NIC	ENSMUSG00000017781.18	novel	3727	12	NA	NA	0	-10	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTCACTTACAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	75478933	75519620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494307_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUSG00000017781.18_3	chr11	+	1633	11	NIC	ENSMUSG00000017781.18	novel	1665	12	NA	NA	29	-4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTGCATCTCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	75478973	75517552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_75479179_75483014_75483046_75489005_75489155_75494214_75494316_75499930_75500006_75503045_75503130_75510065_75510144_75510281_75510393_75511079_75511203_75516290_75516357_75516942
ENSMUSG00000017801.16_1	chr11	+	1818	8	FSM	ENSMUSG00000017801.16	ENSMUST00000107302.8	1826	8	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100978109	100983032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100978194_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_10	chr11	+	1736	7	ISM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	452	1	452	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100978577	100983032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_2	chr11	+	1727	7	FSM	ENSMUSG00000017801.16	ENSMUST00000107303.10	1736	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100978110	100983032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100978194_100978579_100978617_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017801.16_7	chr11	+	1958	8	FSM	ENSMUSG00000017801.16	ENSMUST00000017945.15	1965	8	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGTTTTAAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100978131	100983032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100978356_100978579_100978617_100979061_100979152_100979423_100979531_100979758_100979859_100980044_100980145_100980493_100980696_100981934
ENSMUSG00000017802.15_0	chr11	-	3131	9	FSM	ENSMUSG00000017802.15	ENSMUST00000017946.6	3165	9	28	6	-22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGACTGCTGTTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	101010691	100987344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100989447_100989833_100989967_100990498_100990582_100991747_100991886_100992831_100992917_100993708_100993836_100994715_100994747_100997132_100997240_101010366
ENSMUSG00000017817.12_0	chr2	-	4179	6	FSM	ENSMUSG00000017817.12	ENSMUST00000017961.11	4211	6	25	7	25	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCACTGTGGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	163239844	163178168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163179845_163180524_163180620_163181152_163181893_163183381_163183501_163217523_163218296_163239067
ENSMUSG00000017817.12_1	chr2	-	4148	7	FSM	ENSMUSG00000017817.12	ENSMUST00000109425.3	4155	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCACTGTGGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	163239913	163178168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163179845_163180524_163180620_163181152_163181893_163183381_163183501_163217523_163218296_163239067_163239757_163239856
ENSMUSG00000017817.12_4	chr2	-	1465	2	FSM	ENSMUSG00000017817.12	ENST00000342272.3	1483	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAAGCCAGAGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	163239791	163228813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163229555_163239067
ENSMUSG00000017830.16_0	chr11	-	2386	13	FSM	ENSMUSG00000017830.16	ENSMUST00000017974.13	2412	13	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAGAATATGTAACGGT	NA	NA	NA	NA	NA	NA	NA	NA	100595082	100585720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100586169_100586940_100587038_100587801_100587993_100588981_100589144_100589234_100589385_100590031_100590286_100592049_100592242_100592375_100592503_100593027_100593145_100593904_100594096_100594319_100594522_100594726_100594896_100594996
ENSMUSG00000017831.9_0	chr17	+	2342	6	FSM	ENSMUSG00000017831.9	ENSMUST00000017975.7	2366	6	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAAAAGCAACACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	53786272	53814695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_53786637_53790848_53791104_53804554_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017831.9_2	chr17	+	885	5	FSM	ENSMUSG00000017831.9	ENST00000422242.1	897	5	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAAGTGCAGGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	53790865	53813661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_53791104_53804596_53804707_53805415_53805539_53807403_53807498_53813341
ENSMUSG00000017837.13_1	chr11	+	2075	4	FSM	ENSMUSG00000017837.13	ENSMUST00000017981.10	2097	4	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCAAAAAGTTTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	100513712	100518422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100513835_100515017_100515126_100515768_100516011_100516819
ENSMUSG00000017837.13_2	chr11	+	735	3	FSM	ENSMUSG00000017837.13	ENST00000316082.4	746	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGGGATGGGTGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	100515023	100517093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100515126_100515768_100516061_100516752
ENSMUSG00000017837.13_4	chr11	+	443	3	FSM	ENSMUSG00000017837.13	ENST00000449471.8	461	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCCGGGATGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	100515027	100517090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100515126_100515768_100515843_100516819
ENSMUSG00000017837.13_5	chr11	+	522	4	FSM	ENSMUSG00000017837.13	ENST00000479407.5	532	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGGGATGGGTGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	100515022	100517093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100515126_100515768_100515843_100515939_100516011_100516819
ENSMUSG00000017843.15_1	chr12	+	2344	12	FSM	ENSMUSG00000017843.15	ENSMUST00000221715.2	2367	12	11	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATGAAGATATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	110452182	110538110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129
ENSMUSG00000017843.15_8	chr12	+	4092	13	FSM	ENSMUSG00000017843.15	ENSMUST00000109832.3	4108	13	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATCGCTCTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	110452181	110549489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110452387_110488924_110489125_110510508_110510620_110512028_110512122_110512204_110512336_110517495_110517556_110519218_110519328_110521276_110521331_110527731_110527903_110534161_110534290_110535387_110535490_110537129_110537203_110546834
ENSMUSG00000017858.13_0	chr2	+	2225	13	FSM	ENSMUSG00000017858.13	ENSMUST00000018002.13	2248	13	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATAAAATGGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	162859285	162888050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162859454_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_19	chr2	+	1267	12	ISM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	4877	8	4877	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGAGGCCCACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	162864296	162887262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017858.13_8	chr2	+	1334	13	FSM	ENSMUSG00000017858.13	ENST00000373030.8	1343	13	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGAGGCCCACTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	162859420	162887262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162859486_162864294_162864420_162865269_162865358_162867250_162867381_162867807_162867884_162869950_162870023_162871654_162871782_162873100_162873191_162875154_162875224_162878478_162878634_162882546_162882635_162884610_162884720_162887122
ENSMUSG00000017861.12_0	chr2	+	2604	13	FSM	ENSMUSG00000017861.12	ENST00000396863.8	2616	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCGTCTCCTGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	162896510	162925538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162896769_162901420_162901515_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_11	chr2	+	3633	14	FSM	ENSMUSG00000017861.12	ENSMUST00000018005.10	3651	14	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTAGTGTCTGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	162896616	162926600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917696_162919706_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017861.12_8	chr2	+	2594	14	FSM	ENSMUSG00000017861.12	ENST00000217026.5	2604	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCGTCTCCTGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	162896592	162925538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162896769_162901420_162901515_162903443_162903516_162904376_162904470_162906199_162906421_162910075_162910236_162914543_162914835_162916301_162916725_162917555_162917700_162919711_162919810_162921513_162921628_162922637_162922743_162924469_162924620_162925085
ENSMUSG00000017897.19_0	chr2	+	1224	11	FSM	ENSMUSG00000017897.19	ENST00000611592.4	1241	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGTGCGGGACGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	165529539	165613030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_165529656_165555424_165555493_165557870_165558049_165566593_165566737_165573472_165573557_165603823_165603883_165605616_165605778_165608134_165608250_165608956_165609079_165611144_165611246_165612953
ENSMUSG00000017929.14_0	chr2	-	4197	9	FSM	ENSMUSG00000017929.14	ENSMUST00000109221.9	4210	9	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCAAACCTTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	167191100	167140373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167143404_167143929_167144032_167146915_167147039_167147579_167147768_167148510_167148628_167149463_167149589_167151142_167151257_167155006_167155142_167190837
ENSMUSG00000017943.16_0	chr2	+	2339	6	FSM	ENSMUSG00000017943.16	ENST00000537864.5	2365	6	16	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCAAGCTCACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	163280405	163296975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163280646_163287953_163288147_163289371_163289593_163292485_163292584_163293420_163293536_163295503
ENSMUSG00000017943.16_2	chr2	+	2084	4	FSM	ENSMUSG00000017943.16	ENST00000612599.4	2105	4	11	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCAAGCTCACCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	163280400	163296975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163280646_163287953_163288147_163289418_163289593_163295503
ENSMUSG00000017950.17_0	chr2	+	1183	9	FSM	ENSMUSG00000017950.17	ENST00000457232.5	1187	9	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGAGTGGCCCCGACC	NA	NA	NA	NA	NA	NA	NA	NA	163348857	163410925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163348908_163393496_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806
ENSMUSG00000017950.17_4	chr2	+	1125	8	ISM	ENSMUSG00000017950.17	ENSMUST00000018094.13	4356	10	4393	3904	4393	-8	internal_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGTGTGAGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	163393500	163410921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_163393672_163394479_163394575_163400104_163400212_163400874_163401031_163404438_163404527_163406073_163406230_163408040_163408278_163410806
ENSMUSG00000017969.14_1	chr2	-	2093	10	FSM	ENSMUSG00000017969.14	ENSMUST00000018113.8	2107	10	11	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATTCGCAGTAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	167082513	167044829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167045389_167048653_167048806_167049101_167049284_167050100_167050270_167056727_167056910_167063128_167063281_167065904_167066049_167067195_167067375_167069381_167069506_167082263
ENSMUSG00000017999.17_0	chr2	+	2703	21	FSM	ENSMUSG00000017999.17	ENSMUST00000018143.16	2714	21	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCCTGTTGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	166857121	166876865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303_166866478_166868039_166868191_166869588_166869689_166869788_166869931_166870197_166870352_166871199_166871282_166871404_166871583_166873254_166873362_166873470_166873574_166875482_166875578_166875653_166875775_166875955_166876044_166876392_166876465_166876558
ENSMUSG00000017999.17_11	chr2	+	2132	8	FSM	ENSMUSG00000017999.17	ENSMUST00000150571.2	2151	8	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATTAAAAAAAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	166857233	166867718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166857347_166859662_166859810_166861546_166861607_166861799_166861960_166862419_166862464_166862547_166862635_166863967_166864074_166866303
ENSMUSG00000018001.19_0	chr5	+	3716	13	FSM	ENSMUSG00000018001.19	ENSMUST00000116456.10	3738	13	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAAACTGCCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	143608213	143695995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688681_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUSG00000018001.19_4	chr5	+	1854	13	FSM	ENSMUSG00000018001.19	ENST00000396741.3	1871	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAAACAGTCTATATAT	NA	NA	NA	NA	NA	NA	NA	NA	143608264	143694180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143608429_143670150_143670234_143672227_143672293_143672732_143672800_143678302_143678422_143683470_143683552_143687073_143687187_143687351_143687501_143688568_143688685_143692838_143692916_143692993_143693066_143693149_143693305_143693587
ENSMUSG00000018012.12_0	chr11	+	1048	6	FSM	ENSMUSG00000018012.12	ENSMUST00000018156.12	1076	6	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCCTTTGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	120612315	120614787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120612468_120613056_120613129_120613334_120613453_120613631_120613695_120614006_120614167_120614304
ENSMUSG00000018040.10_0	chr15	-	4350	7	FSM	ENSMUSG00000018040.10	ENSMUST00000018184.10	4363	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TCCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83006992	82997636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83001173_83001749_83001949_83002277_83002376_83003385_83003504_83004092_83004219_83006032_83006176_83006862
ENSMUSG00000018042.19_0	chr15	-	2407	9	FSM	ENSMUSG00000018042.19	ENSMUST00000018186.16	2422	9	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCCTGCCAGCGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	83056782	83037698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83056312
ENSMUSG00000018042.19_2	chr15	-	1972	9	FSM	ENSMUSG00000018042.19	ENSMUST00000162834.3	1982	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCGACCCTGCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	83054378	83037704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83038924_83043026_83043127_83044304_83044391_83044538_83044623_83045021_83045152_83046050_83046158_83046432_83046506_83050275_83050408_83054337
ENSMUSG00000018068.14_0	chr11	-	5891	25	FSM	ENSMUSG00000018068.14	ENSMUST00000018212.13	5906	25	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGAACTGTAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86148370	86101515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848_86147156_86148029
ENSMUSG00000018068.14_3	chr11	-	4342	24	FSM	ENSMUSG00000018068.14	ENSMUST00000108039.8	4369	24	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	86147363	86102931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86103628_86103716_86103894_86105736_86105843_86105969_86106078_86106372_86106625_86108561_86108761_86112931_86113058_86115768_86115971_86117463_86117629_86120026_86120132_86122790_86122900_86123908_86124086_86125497_86125633_86127364_86127434_86129084_86129200_86129290_86129363_86133738_86133865_86135228_86135456_86139635_86139810_86140047_86140179_86141793_86141908_86143083_86143187_86146171_86146311_86146848
ENSMUSG00000018076.13_0	chr5	+	9270	31	FSM	ENSMUSG00000018076.13	ENSMUST00000100816.8	9296	31	15	11	-5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGAAACCTCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	118698798	118903492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889931_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ENSMUSG00000018076.13_1	chr5	+	7740	31	FSM	ENSMUSG00000018076.13	ENSMUST00000201010.2	7781	31	20	21	20	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118698823	118901960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118698923_118731397_118731636_118809077_118809163_118818952_118819037_118856547_118856694_118859439_118859635_118859829_118860004_118862052_118862219_118864325_118864431_118866212_118866945_118867834_118868061_118868976_118869083_118869392_118869518_118872023_118872124_118876379_118876601_118876859_118877066_118879890_118880841_118883073_118883254_118883706_118883931_118885383_118885577_118886628_118887047_118887673_118887894_118888910_118889100_118889595_118889820_118889904_118890075_118892327_118892487_118893603_118893781_118895141_118895300_118897166_118897329_118899350_118899464_118900765
ENSMUSG00000018102.6_0	chr13	+	1139	2	FSM	ENSMUSG00000018102.6	ENSMUST00000018246.6	1156	2	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGACTGGGAGCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	23868195	23876888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23868605_23876158
ENSMUSG00000018126.16_0	chr15	-	2077	14	FSM	ENSMUSG00000018126.16	ENSMUST00000165408.8	2100	14	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTGGGAGTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	79169720	79142400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79142853_79143003_79143048_79143387_79143596_79143851_79143975_79145273_79145488_79145601_79145741_79146012_79146166_79154705_79154853_79155401_79155519_79155724_79155797_79167625_79167688_79168206_79168294_79168774_79168851_79169537
ENSMUSG00000018143.11_0	chr5	+	2833	3	FSM	ENSMUSG00000018143.11	ENSMUST00000018287.10	2849	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCTGGTGTCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	139777279	139788404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139777468_139784893_139784974_139785839
ENSMUSG00000018160.16_0	chr11	-	2798	18	FSM	ENSMUSG00000018160.16	ENST00000394287.7	2815	18	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAGAAATGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98084106	98042990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98043952_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018160.16_2	chr11	-	8009	17	FSM	ENSMUSG00000018160.16	ENSMUST00000107545.9	8024	17	5	10	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAGAAATGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98084114	98042990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018160.16_4	chr11	-	2602	18	FSM	ENSMUSG00000018160.16	ENSMUST00000092735.12	2627	18	14	11	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAAGAAATGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98084072	98042990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98043790_98049154_98049296_98051762_98051869_98051969_98052066_98054625_98054828_98057081_98057201_98057524_98057650_98058344_98058457_98060188_98060279_98061773_98061848_98062521_98062597_98064046_98064119_98069937_98069967_98070842_98070976_98071079_98071135_98074667_98074747_98080007_98080115_98083884
ENSMUSG00000018167.11_0	chr11	+	2042	15	FSM	ENSMUSG00000018167.11	ENSMUST00000018311.5	2070	15	12	16	12	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACATGAAATAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98249205	98271909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98249335_98262895_98263169_98265905_98265984_98266301_98266380_98266500_98266555_98267315_98267434_98267577_98267677_98267890_98267947_98268275_98268369_98268981_98269045_98269160_98269257_98269563_98269644_98269719_98269825_98270798_98270893_98271283
ENSMUSG00000018168.9_0	chr11	-	1188	5	FSM	ENSMUSG00000018168.9	ENST00000377958.6	1197	5	4	5	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTCAATGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98407759	98357809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98379677_98379846_98407676
ENSMUSG00000018168.9_2	chr11	-	1583	7	FSM	ENSMUSG00000018168.9	ENST00000623724.3	1593	7	5	5	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTCAATGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98407758	98357809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98367967_98368106_98376399_98376517_98379677_98379846_98381157_98381416_98407676
ENSMUSG00000018168.9_20	chr11	-	1267	5	FSM	ENSMUSG00000018168.9	ENST00000467757.5	1280	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCATCTGTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98407756	98357817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98381157_98381416_98407676
ENSMUSG00000018168.9_21	chr11	-	1201	4	FSM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCATCTGTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98407756	98357817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98379677_98379846_98381157_98381416_98407676
ENSMUSG00000018168.9_22	chr11	-	1123	3	ISM	ENSMUSG00000018168.9	ENST00000346243.7	1214	4	26346	6	26346	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCATCTGTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98381417	98357817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_98358513_98379677_98379846_98381157
ENSMUSG00000018168.9_27	chr11	-	1318	5	FSM	ENSMUSG00000018168.9	ENST00000351680.7	1331	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCATCTGTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	98407756	98357817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98379677_98379846_98381157_98381416_98407676
ENSMUSG00000018168.9_3	chr11	-	1022	4	FSM	ENSMUSG00000018168.9	ENST00000377944.7	1029	4	2	5	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTCAATGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98357809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98376399_98376517_98407676
ENSMUSG00000018168.9_5	chr11	-	1046	3	FSM	ENSMUSG00000018168.9	ENST00000377945.7	1053	3	2	5	2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTCAATGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98407761	98357809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98381157_98381416_98407676
ENSMUSG00000018168.9_9	chr11	-	902	3	FSM	ENSMUSG00000018168.9	ENST00000394189.6	912	3	5	5	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTCCTCAATGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98407758	98357809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98358513_98367752_98367870_98407676
ENSMUSG00000018171.10_0	chr11	-	2766	12	FSM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAAAAGTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	86574655	86474704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602_86556705_86574565
ENSMUSG00000018171.10_2	chr11	-	2677	11	ISM	ENSMUSG00000018171.10	ENSMUST00000018315.10	2787	12	17957	14	17957	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAAAAGTCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	86556705	86474704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_86476278_86477321_86477425_86492833_86492896_86498001_86498119_86502167_86502249_86526000_86526133_86534323_86534492_86551948_86552060_86554308_86554400_86555479_86555616_86556602
ENSMUSG00000018189.13_0	chr1	+	1680	11	FSM	ENSMUSG00000018189.13	ENSMUST00000189936.7	1696	11	10	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTTTCTTGGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	143653019	143683037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675658_143675773_143677872_143677972_143682421
ENSMUSG00000018189.13_4	chr1	+	1837	11	FSM	ENSMUSG00000018189.13	ENSMUST00000018333.13	1845	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTTGTTACCTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	143653026	143683204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_143653215_143659703_143659768_143661867_143661974_143670014_143670141_143670220_143670283_143670417_143670549_143672499_143672564_143674128_143674232_143675661_143675773_143677872_143677972_143682421
ENSMUSG00000018196.19_0	chr1	+	3323	4	FSM	ENSMUSG00000018196.19	ENSMUST00000185362.7	3337	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTTAAAAAATCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	143615302	143625133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_143615497_143617385_143617450_143620784_143620962_143622245
ENSMUSG00000018196.19_1	chr1	+	569	4	FSM	ENSMUSG00000018196.19	ENSMUST00000111957.10	580	4	3	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCATCTCCCGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	143615355	143622506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_143615423_143617385_143617450_143620784_143620962_143622245
ENSMUSG00000018196.19_2	chr1	+	3491	4	FSM	ENSMUSG00000018196.19	ENSMUST00000129653.3	3515	4	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTGTGCTGAATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	143616136	143625414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_143616218_143617385_143617450_143620784_143620962_143622245
ENSMUSG00000018199.10_0	chr1	-	8716	9	FSM	ENSMUSG00000018199.10	ENSMUST00000159879.2	8738	9	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATCAAATAACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	143652794	143626537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_143633633_143635680_143635828_143636090_143636205_143637007_143637125_143641170_143641309_143641511_143641659_143642327_143642549_143646163_143646765_143652658
ENSMUSG00000018209.16_0	chr2	+	5218	11	FSM	ENSMUSG00000018209.16	ENSMUST00000018353.14	5232	11	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACAGTCTGTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	163916063	163997436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163993592
ENSMUSG00000018209.16_1	chr2	+	2001	12	FSM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTACAGTTTCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	163916090	163994160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163916168_163921432_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163984122_163984209_163993592
ENSMUSG00000018209.16_13	chr2	+	4090	3	FSM	ENSMUSG00000018209.16	ENSMUST00000088291.5	4098	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCACAGTCTGTCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	163952120	163997436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163952209_163959888_163960047_163993592
ENSMUSG00000018209.16_8	chr2	+	1927	11	ISM	ENSMUSG00000018209.16	ENST00000372801.5	2013	12	5344	7	5344	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTACAGTTTCAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	163921429	163994160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_163921514_163925549_163925679_163928414_163928530_163930760_163930926_163938658_163938827_163940358_163940497_163941616_163941746_163942329_163942517_163959888_163960047_163984122_163984209_163993592
ENSMUSG00000018217.13_0	chr11	+	1807	5	FSM	ENSMUSG00000018217.13	ENSMUST00000108702.8	1822	5	7	8	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTCACTTGTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63019814	63050364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63019977_63023953_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_10	chr11	+	1361	2	FSM	ENSMUSG00000018217.13	ENST00000676161.1	1380	2	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATCAAAATAAACATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	63025253	63050345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63025347_63049077
ENSMUSG00000018217.13_11	chr11	+	1605	3	FSM	ENSMUSG00000018217.13	ENST00000676329.1	1621	3	7	9	7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTCACTTGTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63025253	63050364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63025340_63041853_63042086_63049077
ENSMUSG00000018217.13_2	chr11	+	2057	5	FSM	ENSMUSG00000018217.13	ENST00000675808.1	2076	5	8	11	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCAGAGTAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	63022305	63050355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63022481_63023707_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_5	chr11	+	1782	5	FSM	ENSMUSG00000018217.13	ENSMUST00000018361.10	1800	5	9	9	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTCACTTGTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63022346	63050364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63022481_63023950_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018217.13_8	chr11	+	1731	5	FSM	ENSMUSG00000018217.13	ENST00000674651.1	1745	5	2	12	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACATCAGAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	63023509	63050350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_63023573_63023916_63024071_63025246_63025347_63041944_63042086_63049077
ENSMUSG00000018239.10_0	chr11	+	1253	4	FSM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATTGGAATGATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	53215510	53224119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53215569_53218095_53218255_53221513_53221559_53223128
ENSMUSG00000018239.10_1	chr11	+	474	3	FSM	ENSMUSG00000018239.10	ENST00000513848.5	492	3	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAGAAGAAAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	53215517	53223392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53215569_53218095_53218255_53223128
ENSMUSG00000018239.10_4	chr11	+	189	2	FSM	ENSMUSG00000018239.10	ENST00000512933.1	197	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATTGCTGCAAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	53215525	53218237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53215573_53218095
ENSMUSG00000018239.10_5	chr11	+	134	1	ISM	ENSMUSG00000018239.10	ENSMUST00000018383.10	1267	4	2596	5893	2576	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	343	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGATTATTGCTGCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	53218101	53218235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_53218100_53218200
ENSMUSG00000018239.10_6	chr11	+	415	2	ISM	ENSMUSG00000018239.10	ENST00000513848.5	492	3	2586	18	2578	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAGAAGAAAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	53218103	53223392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_53218255_53223128
ENSMUSG00000018286.7_0	chr11	+	786	6	FSM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGTTTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	70416220	70418472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70416322_70416710_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018286.7_4	chr11	+	686	5	ISM	ENSMUSG00000018286.7	ENSMUST00000018430.7	798	6	498	3	498	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGACGTTTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	70416709	70418472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70416779_70417119_70417252_70417369_70417500_70418004_70418150_70418262
ENSMUSG00000018287.13_0	chr11	-	1141	7	FSM	ENSMUSG00000018287.13	ENSMUST00000018431.13	1159	7	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGAAATGTGGATACTA	NA	NA	NA	NA	NA	NA	NA	NA	70560228	70554600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70555047_70555145_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018287.13_5	chr11	-	1084	6	FSM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTTCTGACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70560091	70554619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122_70556191_70560022
ENSMUSG00000018287.13_6	chr11	-	1013	5	ISM	ENSMUSG00000018287.13	ENST00000575142.5	1091	6	3905	5	3905	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTGTTCTGACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70556188	70554619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_70555303_70555403_70555494_70555608_70555694_70555813_70555903_70556122
ENSMUSG00000018293.5_3	chr11	-	845	3	FSM	ENSMUSG00000018293.5	ENSMUST00000018437.3	861	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	21405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAACAAGGACCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70545460	70542681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70543048_70543612_70543806_70545174
ENSMUSG00000018322.11_0	chr2	-	1905	7	FSM	ENSMUSG00000018322.11	ENSMUST00000109384.10	1923	7	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTGGCTCTGACGCA	NA	NA	NA	NA	NA	NA	NA	NA	163913074	163895462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912832
ENSMUSG00000018322.11_1	chr2	-	2283	7	FSM	ENSMUSG00000018322.11	ENSMUST00000018466.4	2302	7	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCTGGCTCTGACGCA	NA	NA	NA	NA	NA	NA	NA	NA	163913006	163895462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163896428_163896620_163896748_163900585_163900734_163902758_163902929_163906811_163906965_163908489_163908590_163912386
ENSMUSG00000018326.10_0	chr2	+	2996	6	FSM	ENSMUSG00000018326.10	ENSMUST00000018470.10	3013	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTAGTTGCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	163836888	163860500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163837286_163853521_163853825_163855925_163856050_163857150_163857315_163858022_163858119_163858588
ENSMUSG00000018339.13_0	chr11	+	1580	5	FSM	ENSMUSG00000018339.13	ENSMUST00000082430.11	1594	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTCAGCCTACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	54793607	54801199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54793879_54797952_54798107_54799366_54799485_54799865_54799966_54800262
ENSMUSG00000018340.14_0	chr11	-	2478	26	FSM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54924266	54869939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUSG00000018340.14_1	chr11	-	2459	25	FSM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54924265	54869939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362_54912407_54924184
ENSMUSG00000018340.14_2	chr11	-	2379	24	ISM	ENSMUSG00000018340.14	ENSMUST00000102727.3	2471	25	11864	6	11864	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54912407	54869939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362
ENSMUSG00000018340.14_3	chr11	-	2397	25	ISM	ENSMUSG00000018340.14	ENSMUST00000108883.10	2489	26	11864	6	11864	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGAGTGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54912407	54869939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_54870348_54872441_54872565_54874123_54874183_54875901_54875998_54876947_54877042_54877876_54877895_54882216_54882271_54883112_54883193_54885109_54885201_54885292_54885407_54885710_54885806_54887138_54887221_54889360_54889440_54890620_54890680_54892036_54892160_54894804_54894864_54895492_54895589_54895938_54896033_54896610_54896668_54898683_54898764_54899935_54900027_54901817_54901932_54902528_54902624_54904650_54904742_54912362
ENSMUSG00000018341.13_0	chr6	-	2077	10	FSM	ENSMUSG00000018341.13	ENST00000541374.6	2087	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTAATGAGGCTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	67337798	67269204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_67269721_67275891_67276030_67285941_67286143_67293174_67293392_67313670_67313751_67328222_67328374_67331708_67331852_67333565_67333760_67334659_67334775_67337476
ENSMUSG00000018347.17_0	chr11	+	2268	7	FSM	ENSMUSG00000018347.17	ENSMUST00000071465.9	2270	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCCTTGTAGCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	65698002	65720064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_65698088_65705190_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713650_65713765_65718867
ENSMUSG00000018347.17_11	chr11	+	1655	6	FSM	ENSMUSG00000018347.17	ENST00000580306.7	1675	6	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCACGTCCCCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	65705299	65719648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713653_65713765_65718867
ENSMUSG00000018347.17_8	chr11	+	1656	6	FSM	ENSMUSG00000018347.17	ENST00000454073.7	1672	6	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	3456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCCACGTCCCCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	65705295	65719648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_65705678_65706743_65706952_65707314_65707407_65712755_65712841_65713656_65713765_65718867
ENSMUSG00000018362.15_0	chr11	-	2058	11	FSM	ENSMUSG00000018362.15	ENST00000676857.1	2074	11	12	4	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTGTTTTCTTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	106890374	106879455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106879800_106880145_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUSG00000018362.15_3	chr11	-	2040	11	FSM	ENSMUSG00000018362.15	ENSMUST00000018506.13	2054	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGACTTGCTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106890360	106879461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106879806_106880149_106880300_106881014_106881198_106881464_106881699_106881894_106882159_106882238_106882334_106882683_106882953_106883428_106883518_106887334_106887473_106888063_106888162_106890184
ENSMUSG00000018363.17_0	chr11	-	5276	18	FSM	ENSMUSG00000018363.17	ENSMUST00000103067.10	5290	18	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATACTGAGTTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	106811527	106710891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106713591_106713845_106713922_106715434_106715637_106719329_106719451_106721745_106721884_106724570_106724750_106726895_106727011_106730013_106730118_106732425_106732622_106736808_106736968_106740573_106740659_106743272_106743476_106747006_106747091_106750537_106750623_106755537_106755604_106759360_106759495_106762327_106762437_106811006
ENSMUSG00000018363.17_2	chr11	-	381	4	FSM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGTAAGTGGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	106759924	106750543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106750623_106755537_106755604_106759360_106759495_106759822
ENSMUSG00000018363.17_3	chr11	-	281	3	ISM	ENSMUSG00000018363.17	ENST00000398849.6	391	4	435	3	435	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGGTAAGTGGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	106759496	106750543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_106750623_106755537_106755604_106759360
ENSMUSG00000018372.14_0	chr11	+	2589	19	FSM	ENSMUSG00000018372.14	ENSMUST00000103068.10	2597	19	1	7	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106680078	106709679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUSG00000018372.14_15	chr11	+	2495	19	FSM	ENSMUSG00000018372.14	ENST00000556440.7	2514	19	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGAATATGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	106681568	106709609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697067_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704693_106705443_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUSG00000018372.14_6	chr11	+	2693	20	FSM	ENSMUSG00000018372.14	ENSMUST00000018516.11	2696	20	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTACTGCTTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	106680103	106709679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106680204_106681556_106681686_106683302_106683411_106686948_106687060_106690869_106690970_106692288_106692405_106695818_106695948_106697061_106697256_106700017_106700128_106700453_106700584_106702021_106702176_106703221_106703362_106704586_106704689_106705429_106705563_106706293_106706464_106706559_106706635_106707478_106707632_106708659_106708807_106709021_106709094_106709359
ENSMUSG00000018377.11_0	chr11	+	4567	6	FSM	ENSMUSG00000018377.11	ENSMUST00000018521.11	4583	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTTATGATGGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87959112	87975547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87959260_87963882_87964578_87965487_87965552_87967016_87967201_87969228_87969382_87972223
ENSMUSG00000018378.14_0	chr11	+	3171	11	FSM	ENSMUSG00000018378.14	ENSMUST00000018522.13	3180	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGCCAGCGGCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	87989979	88084965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87990170_88060390_88061001_88068095_88068224_88073306_88073434_88074064_88074258_88075459_88075544_88077886_88077959_88078819_88078914_88079608_88079668_88080880_88080952_88083422
ENSMUSG00000018379.18_0	chr11	+	5345	4	FSM	ENSMUSG00000018379.18	ENSMUST00000139129.9	5362	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTATTGAGATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	87938209	87944575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87938859_87939315_87939501_87939868_87940042_87940237
ENSMUSG00000018379.18_2	chr11	+	2935	3	FSM	ENSMUSG00000018379.18	ENSMUST00000079866.11	2948	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGATGCATGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	87938550	87942310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87938859_87939315_87939501_87939868
ENSMUSG00000018381.16_3	chr11	-	3997	8	FSM	ENSMUSG00000018381.16	ENSMUST00000059026.10	4006	8	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACATCACCAAGGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	95733233	95720906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95723703_95724034_95724161_95724465_95724627_95724828_95724925_95725131_95725218_95726603_95726781_95727895_95728064_95732846
ENSMUSG00000018387.13_3	chr11	+	2381	7	FSM	ENSMUSG00000018387.13	ENST00000319854.7	2394	7	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6015	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGACCTGGGCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	53354091	53357856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53355021_53355101_53355158_53355946_53356136_53356322_53356872_53356950_53357084_53357204_53357478_53357604
ENSMUSG00000018395.20_0	chr11	+	2274	17	FSM	ENSMUSG00000018395.20	ENSMUST00000057330.15	2290	17	13	3	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	53458218	53491929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484200_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUSG00000018395.20_15	chr11	+	2226	17	NIC	ENSMUSG00000018395.20	novel	2257	18	NA	NA	22	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGAGAGAACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	53458245	53491929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_53458359_53461362_53461637_53469670_53469816_53469926_53470012_53470554_53470661_53474053_53474194_53474641_53474840_53475097_53475273_53477661_53477758_53484221_53484358_53484745_53484927_53485103_53485215_53485652_53485779_53488785_53488840_53489120_53489190_53489533_53489659_53491837
ENSMUSG00000018398.19_0	chr11	+	4415	10	FSM	ENSMUSG00000018398.19	ENSMUST00000108987.8	4436	10	14	7	-10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTTTTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	53410586	53434915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432036
ENSMUSG00000018398.19_10	chr11	+	4538	10	FSM	ENSMUSG00000018398.19	ENSMUST00000117061.8	4563	10	17	8	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGTTTTTCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	53410643	53434915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53431856
ENSMUSG00000018398.19_16	chr11	+	1791	10	FSM	ENSMUSG00000018398.19	ENSMUST00000120878.9	1806	10	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGCCTATTCTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	53410740	53432716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425781_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53432301
ENSMUSG00000018398.19_9	chr11	+	2779	10	FSM	ENSMUSG00000018398.19	ENSMUST00000121334.8	2801	10	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTGTAAAAAAAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	53410601	53440375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53410867_53422822_53422944_53425259_53425456_53425775_53425963_53426774_53426937_53427478_53427576_53427980_53428150_53428313_53428447_53428551_53428743_53439117
ENSMUSG00000018401.18_1	chr11	+	5525	18	FSM	ENSMUSG00000018401.18	ENST00000579925.5	5525	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTCTTTTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87483041	87507131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87483081_87484224_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUSG00000018401.18_14	chr11	+	5486	17	ISM	ENSMUSG00000018401.18	ENST00000579925.5	5525	18	1183	0	502	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTCTTTTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87484224	87507131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_87484260_87488021_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUSG00000018401.18_18	chr11	+	5447	16	ISM	ENSMUSG00000018401.18	ENST00000579925.5	5525	18	4984	0	4303	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTCTTTTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87488025	87507131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_87488112_87488440_87488558_87489688_87489772_87491329_87491491_87491599_87491697_87491884_87491999_87493233_87493431_87493605_87493735_87494213_87494326_87494812_87495009_87495243_87495430_87495821_87495977_87501758_87503143_87504247_87504359_87504597_87504687_87504901
ENSMUSG00000018405.8_0	chr11	-	2461	5	FSM	ENSMUSG00000018405.8	ENSMUST00000018549.8	2477	5	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCCTGGAGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	84710327	84703888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84705338_84705514_84705635_84705733_84705867_84709425_84709520_84709662
ENSMUSG00000018411.18_11	chr11	+	1102	9	FSM	ENSMUSG00000018411.18	ENST00000420682.6	1108	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGCTCCCAGGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	104177951	104219012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_2	chr11	+	1301	10	FSM	ENSMUSG00000018411.18	ENST00000535772.6	1314	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104122312	104219067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104122434_104173193_104173307_104177948_104178036_104185684_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018411.18_20	chr11	+	1018	8	ISM	ENSMUSG00000018411.18	ENST00000420682.6	1108	9	7738	1	7738	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGCTCCCAGGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	104185684	104219012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_104185751_104193186_104193237_104197451_104197585_104201094_104201361_104208982_104209076_104212176_104212259_104213253_104213367_104218797
ENSMUSG00000018412.17_0	chr11	-	5485	14	FSM	ENSMUSG00000018412.17	ENSMUST00000106977.8	5510	14	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATCAATGGAAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	104333092	104224054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ENSMUSG00000018412.17_1	chr11	-	5393	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106972.8	5427	15	17	17	17	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATACAGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	104333100	104224343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332550
ENSMUSG00000018412.17_2	chr11	-	5027	15	FSM	ENSMUSG00000018412.17	ENSMUST00000018556.11	5061	15	17	17	17	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGATACAGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	104359670	104224343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104358464_104358579_104359411
ENSMUSG00000018412.17_3	chr11	-	5195	15	FSM	ENSMUSG00000018412.17	ENSMUST00000106971.2	5222	15	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTGCTTAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	104332518	104224387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104226032_104226272_104226526_104227046_104227160_104227374_104227433_104228951_104229074_104233188_104233338_104233684_104233874_104234316_104234500_104241312_104241479_104247509_104247703_104248306_104248423_104259505_104259605_104269510_104269653_104314747_104316120_104332122
ENSMUSG00000018415.15_0	chr11	+	4272	6	FSM	ENSMUSG00000018415.15	ENSMUST00000070681.7	4283	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGTGTCCAATTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	60308092	60336097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60308671_60315599_60315660_60323158_60323267_60327173_60327276_60329268_60329400_60332804
ENSMUSG00000018417.15_0	chr1	-	5030	30	FSM	ENSMUSG00000018417.15	ENSMUST00000046390.14	5052	30	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGAAATTCTCCGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	51955217	51788932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUSG00000018417.15_2	chr1	-	4753	31	FSM	ENSMUSG00000018417.15	ENSMUST00000018561.14	4767	31	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCATTTGCTGGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	51955075	51789154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_51790456_51794801_51794930_51796263_51796417_51797034_51797168_51799453_51799561_51801650_51801786_51803048_51803124_51805980_51806068_51807808_51807896_51808162_51808250_51809944_51810014_51812391_51812542_51813470_51813565_51815362_51815564_51817479_51817707_51818719_51818921_51821128_51821192_51823595_51823701_51832798_51832865_51833470_51833558_51836157_51836277_51836546_51836695_51838690_51838795_51840342_51840442_51852161_51852226_51859299_51859347_51863255_51863361_51873607_51873703_51902477_51902594_51922241_51922386_51954919
ENSMUSG00000018425.19_0	chr11	-	3790	18	FSM	ENSMUSG00000018425.19	ENSMUST00000018569.14	3813	18	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTCTATAGACAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	86698558	86659680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86695082_86695229_86697285_86697454_86698263
ENSMUSG00000018425.19_10	chr11	-	903	9	FSM	ENSMUSG00000018425.19	ENST00000587125.1	914	9	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGACTGCTGTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	86691907	86666487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86680311_86680399_86683987_86684088_86689747_86689815_86690398_86690474_86691794
ENSMUSG00000018425.19_4	chr11	-	2228	17	FSM	ENSMUSG00000018425.19	ENST00000425628.7	2250	17	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTACTATCAGAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	86698422	86660875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86661088_86661855_86662085_86662719_86662790_86664629_86664725_86666485_86666595_86667440_86667556_86675704_86675863_86676582_86676664_86679992_86680176_86680311_86680399_86683987_86684088_86688448_86688581_86689747_86689815_86690245_86690474_86691794_86691915_86697370_86697454_86698263
ENSMUSG00000018427.9_0	chr11	-	4832	5	FSM	ENSMUSG00000018427.9	ENSMUST00000018571.5	4847	5	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTAACTCTTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	86884527	86827259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86884417
ENSMUSG00000018427.9_1	chr11	-	747	4	FSM	ENSMUSG00000018427.9	ENSMUST00000238921.2	459	4	-97	-191	-97	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86862947	86831233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634
ENSMUSG00000018427.9_2	chr11	-	823	5	FSM	ENSMUSG00000018427.9	ENST00000585166.1	828	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTATCTGTTTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86868228	86831233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86831515_86835398_86835508_86836758_86836803_86862634_86862949_86868153
ENSMUSG00000018428.16_1	chr11	-	3743	11	FSM	ENSMUSG00000018428.16	ENSMUST00000018572.11	3758	11	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTAACCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88755408	88721628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88755222
ENSMUSG00000018428.16_2	chr11	-	3706	11	FSM	ENSMUSG00000018428.16	ENSMUST00000107903.8	3721	11	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTCTAACCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88742325	88721628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88722656_88723133_88723197_88723967_88724042_88725487_88725556_88725905_88726057_88727837_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88735084_88736692_88742176
ENSMUSG00000018428.16_6	chr11	-	2171	6	FSM	ENSMUSG00000018428.16	ENST00000314126.4	2189	6	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGGACCAGCAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	88736651	88727907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88728016_88729755_88729884_88730450_88730578_88731994_88732129_88734415_88734523_88735084
ENSMUSG00000018433.15_0	chr11	-	3140	18	FSM	ENSMUSG00000018433.15	ENSMUST00000018577.8	3158	18	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTACCAAATAATGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	107080195	107057494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064288_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000018433.15_4	chr11	-	3066	18	FSM	ENSMUSG00000018433.15	ENSMUST00000106757.8	3098	18	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTACCAAATAATGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	107080181	107057494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_107058468_107059107_107059216_107061917_107062011_107062440_107062520_107064035_107064228_107064429_107064556_107066391_107066574_107067608_107067684_107069401_107069488_107069794_107069919_107070867_107070945_107071738_107071928_107072564_107072710_107074398_107074457_107075565_107075715_107077460_107077518_107077634_107077749_107079942
ENSMUSG00000018442.14_0	chr11	-	3648	7	FSM	ENSMUSG00000018442.14	ENSMUST00000143850.8	3666	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGCAAACTATTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	70910120	70898276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70909969
ENSMUSG00000018442.14_7	chr11	-	1443	7	FSM	ENSMUSG00000018442.14	ENSMUST00000171041.8	1466	7	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTATTTAAGCTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	70910644	70900758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70901253_70903935_70904027_70904268_70904465_70905375_70905470_70906552_70906627_70909137_70909204_70910216
ENSMUSG00000018446.9_0	chr11	-	1157	6	FSM	ENSMUSG00000018446.9	ENSMUST00000078528.7	1175	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	5467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGAGGTTCTTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	70873842	70868669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70869071_70869253_70869377_70869514_70869611_70870835_70870930_70872995_70873147_70873550
ENSMUSG00000018449.13_0	chr11	+	1080	7	FSM	ENSMUSG00000018449.13	ENSMUST00000018593.10	1100	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACCTCAACTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70861052	70868653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70864627_70864740_70864894_70864959_70865725_70865867_70868483
ENSMUSG00000018449.13_6	chr11	+	339	4	FSM	ENSMUSG00000018449.13	ENSMUST00000169965.8	343	4	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCCCGACCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	70861334	70868511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70861414_70862589_70862761_70863840_70863902_70868483
ENSMUSG00000018470.9_0	chr11	+	2513	14	FSM	ENSMUSG00000018470.9	ENSMUST00000018614.3	2538	14	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCACGACCACGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	69217101	69223861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69217750_69218945_69218990_69219076_69219115_69219334_69219415_69220675_69220721_69220808_69220854_69221008_69221053_69221222_69221310_69221565_69221652_69221876_69221998_69222087_69222183_69222285_69222407_69222561_69222651_69222891
ENSMUSG00000018474.19_0	chr11	-	7251	40	FSM	ENSMUSG00000018474.19	ENSMUST00000108661.8	7261	40	10	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGCTGTCATTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	69260222	69234098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239535_69239638_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ENSMUSG00000018474.19_15	chr11	-	6039	39	FSM	ENSMUSG00000018474.19	ENSMUST00000092971.13	6066	39	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACTGACTGGATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	69260199	69235185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69235305_69235961_69236089_69236296_69236461_69237443_69237640_69237891_69238025_69238578_69238688_69239218_69239348_69239746_69239883_69239996_69240119_69240615_69240779_69240932_69241078_69241617_69241752_69241909_69241996_69242925_69242992_69243372_69243551_69244013_69244181_69244489_69244722_69244887_69245013_69245190_69245309_69246164_69246297_69246456_69246599_69247032_69247207_69247361_69247484_69247763_69247902_69248190_69248392_69248530_69248723_69249068_69249169_69249952_69250085_69250652_69250865_69250997_69251202_69251370_69251602_69251874_69252069_69252210_69252362_69252496_69252628_69252861_69253149_69254445_69254571_69254798_69254970_69255517_69255631_69259961
ENSMUSG00000018476.8_0	chr11	-	6617	23	FSM	ENSMUSG00000018476.8	ENSMUST00000094077.5	6654	23	10	27	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGCAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69304491	69289360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084_69297436_69297522_69297727_69297809_69297972_69298061_69298155_69298250_69298471_69298566_69298666_69298851_69298994_69299083_69299228_69299489_69299608_69304358
ENSMUSG00000018476.8_1	chr11	-	6740	24	FSM	ENSMUSG00000018476.8	ENST00000448097.7	6774	24	12	22	12	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAGCAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69311161	69289360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69290676_69290765_69290937_69291021_69291149_69291532_69291675_69291818_69292007_69292088_69292204_69292340_69292490_69292584_69292657_69292742_69292808_69292901_69293108_69294403_69294510_69294615_69294743_69294831_69297000_69297084_69297436_69297522_69297727_69297809_69297972_69298061_69298155_69298250_69298471_69298566_69298666_69298851_69298994_69299083_69299228_69299489_69299608_69304358_69304500_69311046
ENSMUSG00000018479.13_0	chr11	+	667	5	FSM	ENSMUSG00000018479.13	ENST00000269127.5	679	5	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTGTCATGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85061905	85069227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_85062072_85063681_85063762_85064013_85064190_85064842_85064943_85069082
ENSMUSG00000018481.10_0	chr11	-	6443	13	FSM	ENSMUSG00000018481.10	ENSMUST00000018625.10	6463	13	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGCTTCCGATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	85125942	85078093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_85082726_85085400_85085567_85086891_85087083_85088891_85088978_85091119_85091245_85092241_85092348_85092428_85092497_85095059_85095150_85100765_85100935_85105061_85105186_85105935_85106088_85107261_85107351_85125497
ENSMUSG00000018500.3_0	chr11	+	1831	2	FSM	ENSMUSG00000018500.3	ENSMUST00000018644.3	1845	2	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCCAGCACGCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	62139816	62157272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62140263_62155887
ENSMUSG00000018501.18_29	chr11	-	8429	44	FSM	ENSMUSG00000018501.18	ENST00000395857.7	8441	44	12	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCAGATTTGTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62348152	62207523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62208857_62210191_62210369_62211821_62212044_62212217_62212272_62216312_62216456_62217931_62218076_62220266_62220479_62220801_62220966_62221621_62221751_62224488_62224983_62225321_62225488_62228370_62228521_62228924_62229075_62229684_62229892_62231233_62231456_62233822_62234178_62235457_62235715_62236060_62236145_62240178_62240320_62242203_62242373_62244059_62244161_62245196_62245299_62245396_62245515_62249680_62249842_62257789_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62329163_62329342_62347973
ENSMUSG00000018501.18_86	chr11	-	2790	19	FSM	ENSMUSG00000018501.18	ENST00000395848.5	2811	19	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCATCACTACAACACCC	NA	NA	NA	NA	NA	NA	NA	NA	62329325	62257778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62257986_62260119_62260250_62263901_62264449_62267460_62267588_62269340_62269481_62272233_62272297_62273986_62274202_62275543_62275669_62280516_62280619_62281804_62281860_62283330_62283510_62285963_62286055_62289090_62289264_62292026_62292094_62294624_62294678_62295235_62295293_62301645_62301760_62310423_62310607_62329163
ENSMUSG00000018501.18_96	chr11	-	275	2	FSM	ENSMUSG00000018501.18	ENST00000486162.1	291	2	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	9069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTGAAAAAGAAACAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	62329271	62310439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62310607_62329163
ENSMUSG00000018507.17_0	chr11	+	2870	16	FSM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	0	39	0	-39	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62465363	62491302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62465427_62466799_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ENSMUSG00000018507.17_3	chr11	+	2797	15	ISM	ENSMUSG00000018507.17	ENSMUST00000018651.14	2909	16	1446	39	-141	-39	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62466809	62491302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_62466952_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ENSMUSG00000018507.17_5	chr11	+	2643	15	FSM	ENSMUSG00000018507.17	ENSMUST00000102643.2	2650	15	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCAAGTCTTCTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	62466957	62491125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62467123_62469128_62469422_62471997_62472132_62473668_62473960_62475201_62475501_62480476_62480651_62480988_62481145_62481732_62481832_62483051_62483123_62483576_62483743_62484978_62485046_62485748_62486078_62487735_62487864_62489059_62489140_62490934
ENSMUSG00000018509.9_0	chr11	-	1011	5	FSM	ENSMUSG00000018509.9	ENSMUST00000018653.8	1032	5	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAATGCTATTACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	62430075	62415780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62416114_62418317_62418433_62424710_62424781_62427107_62427207_62429681
ENSMUSG00000018537.17_1	chr11	-	1383	10	FSM	ENSMUSG00000018537.17	ENST00000611883.4	1388	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGTGTGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	97588643	97580564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241_97584395_97588578
ENSMUSG00000018537.17_11	chr11	-	1154	9	FSM	ENSMUSG00000018537.17	ENST00000618506.1	1163	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCTCCCATTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	97590511	97580729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582848_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97590361
ENSMUSG00000018537.17_2	chr11	-	1313	9	ISM	ENSMUSG00000018537.17	ENST00000611883.4	1388	10	4259	0	-1156	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTATGTGTGTGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	97584389	97580564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_97581185_97581786_97581868_97582509_97582606_97582683_97582739_97582852_97582962_97583194_97583246_97583329_97583386_97583551_97583649_97584241
ENSMUSG00000018541.11_0	chr11	-	3087	10	FSM	ENSMUSG00000018541.11	ENSMUST00000018685.9	3105	10	18	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTAGAGCGATCTAC	NA	NA	NA	NA	NA	NA	NA	NA	97657364	97636440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97638296_97638786_97638949_97641697_97641788_97643395_97643590_97644041_97644106_97644730_97644859_97646976_97647047_97648398_97648636_97654034_97654208_97657250
ENSMUSG00000018547.9_0	chr11	-	5006	10	FSM	ENSMUSG00000018547.9	ENSMUST00000018691.9	5053	10	44	3	44	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGGTATGTGAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	97635486	97605985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97609766_97610555_97610660_97611048_97611308_97613187_97613302_97613765_97613805_97615204_97615352_97617530_97617684_97620379_97620477_97623483_97623582_97635271
ENSMUSG00000018548.16_0	chr11	+	5614	24	FSM	ENSMUSG00000018548.16	ENSMUST00000041282.13	5632	24	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAATTGTCCTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87017912	87111501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87018321_87020541_87020644_87028415_87028457_87031310_87031428_87033952_87034041_87036289_87036413_87037759_87037884_87040121_87040190_87050646_87050772_87054644_87054696_87057427_87057510_87058265_87058343_87068674_87068855_87073246_87073362_87075709_87075929_87077204_87077342_87080899_87080986_87087646_87087842_87092143_87092453_87096758_87096882_87097589_87097780_87100594_87100714_87107262_87107374_87109077
ENSMUSG00000018554.14_2	chr11	+	969	8	FSM	ENSMUSG00000018554.14	ENST00000557561.2	985	8	13	3	13	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	2852	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTCCAACTCAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	69826882	69831917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69827075_69827722_69827787_69829167_69829202_69830063_69830154_69830699_69830985_69831153_69831249_69831430_69831594_69831871
ENSMUSG00000018559.17_0	chr11	+	1609	8	FSM	ENSMUSG00000018559.17	ENSMUST00000108593.8	1627	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAAGCTGCCCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	69871991	69881419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69872412_69875079_69875147_69875241_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307_69880393_69880802
ENSMUSG00000018559.17_2	chr11	+	658	7	FSM	ENSMUSG00000018559.17	ENST00000506083.1	671	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGGGAAGTGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	69872318	69880390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69872412_69875079_69875147_69875246_69875361_69875559_69875632_69879438_69879556_69879653_69879766_69880307
ENSMUSG00000018565.18_0	chr11	-	1446	9	FSM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAACCTCTGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	69872078	69859057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039_69871389_69872032
ENSMUSG00000018565.18_1	chr11	-	1391	8	ISM	ENSMUSG00000018565.18	ENSMUST00000108594.8	1454	9	699	8	699	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAACCTCTGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	69871379	69859057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69859367_69859921_69860023_69860318_69860415_69861386_69861569_69865865_69866087_69870655_69870737_69870824_69870886_69871039
ENSMUSG00000018567.15_0	chr11	+	1334	4	FSM	ENSMUSG00000018567.15	ENSMUST00000018711.15	1351	4	10	7	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAATTTGCCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	69881978	69885770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69882629_69883190_69883270_69883407_69883527_69885284
ENSMUSG00000018567.15_4	chr11	+	829	3	FSM	ENSMUSG00000018567.15	ENST00000571253.1	838	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGTACCTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	69882624	69885349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69883270_69883407_69883527_69885284
ENSMUSG00000018570.18_1	chr11	-	1454	8	FSM	ENSMUSG00000018570.18	ENSMUST00000018714.13	1485	8	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATCAGGAATCTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	69791744	69788199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69788319_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUSG00000018570.18_2	chr11	-	1613	9	FSM	ENSMUSG00000018570.18	ENSMUST00000102580.10	1640	9	14	13	-5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATCAGGAATCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69791769	69788201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69788319_69788444_69788581_69788928_69788977_69789077_69789237_69789672_69789919_69790024_69790114_69790342_69790415_69790531_69790637_69791128
ENSMUSG00000018572.11_0	chr11	+	1993	5	FSM	ENSMUSG00000018572.11	ENSMUST00000018716.10	2006	5	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCCTTGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	69886612	69890832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUSG00000018572.11_2	chr11	+	1690	5	FSM	ENSMUSG00000018572.11	ENSMUST00000101526.9	1706	5	13	3	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCCTTGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	69886714	69890832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69886880_69888422_69888455_69888571_69888665_69889327_69889959_69890063
ENSMUSG00000018572.11_3	chr11	+	1783	5	FSM	ENSMUSG00000018572.11	ENSMUST00000153684.8	1797	5	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCCTTGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	69887828	69890832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69887886_69888422_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUSG00000018572.11_5	chr11	+	2200	4	FSM	ENSMUSG00000018572.11	ENSMUST00000135814.2	2214	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCCTCCTTGTCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	69887948	69890832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69888455_69888571_69888665_69889126_69889959_69890063
ENSMUSG00000018574.15_0	chr11	-	2152	20	FSM	ENSMUSG00000018574.15	ENSMUST00000102574.10	2168	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTGCCGTGAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	69906224	69901014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905618_69905685_69905942_69906022_69906088
ENSMUSG00000018574.15_22	chr11	-	2005	19	FSM	ENSMUSG00000018574.15	ENSMUST00000018718.8	2020	19	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAAAACCCTTTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	69906209	69901080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69901263_69901350_69901427_69901523_69901597_69901674_69901748_69901831_69901905_69901993_69902092_69902170_69902273_69902361_69902425_69902509_69902597_69903011_69903117_69903273_69903473_69903783_69903910_69903997_69904128_69904259_69904405_69905070_69905206_69905304_69905370_69905456_69905530_69905942_69906022_69906088
ENSMUSG00000018583.6_0	chr11	+	6691	12	FSM	ENSMUSG00000018583.6	ENSMUST00000018727.4	6703	12	10	2	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	6812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGAATTCTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55360520	55395662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_55360628_55376451_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018583.6_11	chr11	+	2475	10	FSM	ENSMUSG00000018583.6	ENST00000520177.6	2488	10	10	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGCCAATTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	55376458	55391670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_55376565_55378304_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55390284
ENSMUSG00000018583.6_13	chr11	+	1424	11	FSM	ENSMUSG00000018583.6	ENST00000677105.1	1442	11	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATTGCTTGGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55376462	55390489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_55376567_55378282_55378387_55379844_55380019_55382789_55382881_55384273_55384368_55386078_55386278_55386969_55387072_55388476_55388589_55388738_55388868_55389383_55389494_55390284
ENSMUSG00000018585.10_0	chr11	-	531	4	FSM	ENSMUSG00000018585.10	ENSMUST00000108857.2	541	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGTGTCTGGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	55352056	55337467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_55337611_55341282_55341452_55345706_55345783_55351913
ENSMUSG00000018589.9_0	chrX	-	3060	11	FSM	ENSMUSG00000018589.9	ENST00000443437.6	3072	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTTGTCCAGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	164110537	163912017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818_164065043_164072594_164072623_164107496_164107631_164108675_164108920_164109797_164109977_164110413
ENSMUSG00000018589.9_7	chrX	-	1716	9	FSM	ENSMUSG00000018589.9	ENST00000355020.8	1726	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAACAGAGAAGAACATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	164110143	163913200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_163913559_163966568_163966719_164035215_164035431_164037216_164037355_164040101_164040185_164064818_164065043_164072435_164072504_164107496_164107631_164109797
ENSMUSG00000018593.14_1	chr11	-	2097	10	FSM	ENSMUSG00000018593.14	ENSMUST00000108858.8	2115	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACGGCTGTCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55310715	55285334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298103_55300753_55300824_55310613
ENSMUSG00000018593.14_2	chr11	-	2281	10	FSM	ENSMUSG00000018593.14	ENSMUST00000018737.13	2300	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	19360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACGGCTGTCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55310896	55285334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613
ENSMUSG00000018593.14_32	chr11	-	1316	11	FSM	ENSMUSG00000018593.14	ENSMUST00000213866.2	1366	11	34	16	34	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	55311082	55286262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_55286440_55286626_55286776_55289373_55289523_55290017_55290152_55292776_55292898_55296005_55296128_55297335_55297424_55298045_55298106_55300753_55300824_55310613_55310682_55310904
ENSMUSG00000018595.7_1	chrX	-	1030	7	FSM	ENSMUSG00000018595.7	ENST00000674488.1	1041	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTATAAAGTACTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	135676700	135658490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135658736_135663467_135663618_135673471_135673613_135675074_135675158_135675297_135675522_135676234_135676303_135676581
ENSMUSG00000018599.6_0	chr11	+	2510	4	FSM	ENSMUSG00000018599.6	ENSMUST00000018743.5	2522	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTATATGTGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	60619229	60623771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60619394_60621108_60621262_60621455_60621619_60621741
ENSMUSG00000018604.19_0	chr5	+	4962	7	FSM	ENSMUSG00000018604.19	ENSMUST00000079719.11	4982	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAGGCAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	119808744	119822617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUSG00000018604.19_1	chr5	+	4762	8	FSM	ENSMUSG00000018604.19	ENSMUST00000121021.8	4777	8	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAATGAGTTTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	119808931	119822779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_119809123_119809297_119810470_119812090_119812359_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUSG00000018604.19_3	chr5	+	4824	8	FSM	ENSMUSG00000018604.19	ENSMUST00000018748.9	4856	8	22	10	22	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAATGAGTTTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	119809104	119822779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_119810470_119812090_119812359_119813307_119813368_119813622_119813770_119815565_119815643_119816745_119816898_119818459_119819131_119820695
ENSMUSG00000018634.11_0	chr11	+	1135	12	FSM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAACCTCAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	104023883	104065347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104023931_104044346_104044435_104054629_104054716_104059881_104059989_104060658_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420_104064557_104064714_104064757_104065213
ENSMUSG00000018634.11_4	chr11	+	1078	11	ISM	ENSMUSG00000018634.11	ENST00000352855.9	1142	12	20473	7	12	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAACCTCAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	104044356	104065347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_104044435_104054629_104054716_104059881_104059989_104060658_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420_104064557_104064714_104064757_104065213
ENSMUSG00000018634.11_5	chr11	+	1164	11	FSM	ENSMUSG00000018634.11	ENST00000577353.5	1175	11	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGAACCTCAGGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	104044348	104065347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104044435_104050077_104050198_104054629_104054716_104059881_104059989_104060658_104060780_104060947_104061102_104061305_104061367_104063736_104063810_104064131_104064218_104064420_104064557_104065213
ENSMUSG00000018648.16_0	chr11	-	1429	3	FSM	ENSMUSG00000018648.16	ENSMUST00000100705.11	1447	3	11	7	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGCCCTTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	83959172	83938873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83940137_83941657_83941747_83959095
ENSMUSG00000018648.16_1	chr11	-	1448	3	FSM	ENSMUSG00000018648.16	ENSMUST00000164891.8	1454	3	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGCCCTTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	83959402	83938873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83940137_83941657_83941747_83959306
ENSMUSG00000018648.16_2	chr11	-	1549	4	FSM	ENSMUSG00000018648.16	ENSMUST00000018792.12	1571	4	15	7	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGCCCTTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	83959612	83938873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83940137_83941657_83941747_83959306_83959407_83959515
ENSMUSG00000018648.16_3	chr11	-	1352	2	ISM	ENSMUSG00000018648.16	ENSMUST00000108101.8	1082	3	16160	-366	16160	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAGCCCTTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	83941746	83938873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_83940137_83941657
ENSMUSG00000018651.15_0	chr11	-	2144	16	FSM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATTTGTGGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	84020425	83969751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813_84017922_84020362
ENSMUSG00000018651.15_1	chr11	-	2078	15	ISM	ENSMUSG00000018651.15	ENSMUST00000018795.13	2151	16	2508	6	2508	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTAATTTGTGGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	84017918	83969751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_83970604_83972863_83972938_83975539_83975584_83976464_83976598_83977936_83978009_83981374_83981486_83982801_83982846_83984409_83984474_83993878_83993952_83995017_83995107_83997014_83997173_84000779_84000872_84009073_84009134_84011907_84012015_84017813
ENSMUSG00000018654.18_0	chr11	+	5154	8	FSM	ENSMUSG00000018654.18	ENSMUST00000076700.11	5163	8	9	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTTGTGTGTGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	11636221	11722926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_11636469_11650204_11650259_11657784_11657905_11698310_11698572_11704006_11704175_11708194_11708318_11711218_11711354_11718880
ENSMUSG00000018659.13_0	chr11	-	1967	7	FSM	ENSMUSG00000018659.13	ENSMUST00000018803.12	1994	7	22	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAATGTTTAACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	96834790	96828655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_1	chr11	-	736	6	FSM	ENSMUSG00000018659.13	ENST00000225573.5	755	6	11	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGGACCCAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	96834775	96829742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96829910_96830080_96830152_96830841_96830896_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018659.13_2	chr11	-	814	6	FSM	ENSMUSG00000018659.13	ENST00000434554.7	830	6	8	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGGACCCAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	96834778	96829742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96829910_96830080_96830152_96830473_96830603_96831681_96831782_96833235_96833361_96834556
ENSMUSG00000018661.18_0	chr11	+	3910	14	FSM	ENSMUSG00000018661.18	ENSMUST00000018805.15	3935	14	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAAGATCCCGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113540005	113553759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_113540702_113542670_113542913_113543050_113543233_113543367_113543539_113544729_113544887_113545793_113546005_113546685_113547475_113547828_113547976_113548200_113548363_113549304_113549433_113550094_113550204_113551768_113551879_113551965_113552045_113553032
ENSMUSG00000018666.14_0	chr11	+	1812	4	FSM	ENSMUSG00000018666.14	ENSMUST00000018810.10	1824	4	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATATAATAAATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	96679956	96694787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553
ENSMUSG00000018666.14_1	chr11	+	1238	6	FSM	ENSMUSG00000018666.14	ENSMUST00000093943.10	1251	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATCTGTCTTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	96679994	96699463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96697441_96697591_96699009
ENSMUSG00000018666.14_4	chr11	+	888	5	FSM	ENSMUSG00000018666.14	ENSMUST00000079702.4	912	5	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAAAACATGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	96680088	96699356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96680180_96691596_96691774_96692254_96692433_96693553_96693649_96699009
ENSMUSG00000018669.15_0	chr11	-	2234	14	FSM	ENSMUSG00000018669.15	ENSMUST00000103152.11	2250	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGAGTTGTCACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	96807313	96798258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96798949_96799055_96799228_96799539_96799746_96800766_96800856_96801482_96801565_96801905_96802008_96802377_96802523_96802698_96802836_96803042_96803222_96803831_96803881_96804207_96804309_96804490_96804623_96806976_96807023_96807209
ENSMUSG00000018672.16_0	chr11	+	917	9	FSM	ENSMUSG00000018672.16	ENSMUST00000018816.14	930	9	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCTCCTTTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	96740711	96752026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96740823_96741498_96741568_96744260_96744343_96744883_96744976_96745409_96745466_96746081_96746160_96747497_96747550_96748378_96748418_96751688
ENSMUSG00000018677.10_0	chr11	-	1668	12	FSM	ENSMUSG00000018677.10	ENSMUST00000018821.9	1685	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTCACAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102298359	102293816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296653_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUSG00000018677.10_1	chr11	-	1591	12	FSM	ENSMUSG00000018677.10	ENSMUST00000107098.8	1606	12	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTCACAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102298306	102293816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297031_102297077_102297187_102297248_102297380_102297481_102298215
ENSMUSG00000018677.10_20	chr11	-	1020	10	FSM	ENSMUSG00000018677.10	ENST00000537904.6	1032	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCGGGGAGCAACCGGC	NA	NA	NA	NA	NA	NA	NA	NA	102297475	102294246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102294362_102294458_102294540_102294616_102294699_102294856_102294967_102295277_102295452_102295620_102295746_102295837_102295906_102296518_102296629_102297187_102297248_102297380
ENSMUSG00000018678.14_0	chr11	-	3051	7	FSM	ENSMUSG00000018678.14	ENSMUST00000107624.8	3055	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCAAAGTCTGCGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	96868537	96844170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96845397_96846600_96846795_96846930_96847106_96848249_96848563_96851863_96852836_96854190_96854271_96868446
ENSMUSG00000018678.14_7	chr11	-	821	3	FSM	ENSMUSG00000018678.14	ENST00000613139.1	834	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGAGCCCCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	96868581	96852226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96852836_96854190_96854268_96868446
ENSMUSG00000018697.15_0	chr11	-	1813	13	FSM	ENSMUSG00000018697.15	ENSMUST00000018841.3	1822	13	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTCTTCACTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	84404339	84313680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84313846_84333391_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84400484_84400623_84401024_84401244_84402308_84402405_84402966_84403156_84404117
ENSMUSG00000018697.15_4	chr11	-	1676	11	FSM	ENSMUSG00000018697.15	ENST00000616434.2	1689	11	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGTGGCAGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84404401	84333393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84333464_84336452_84336534_84339945_84340014_84358286_84358371_84361389_84361555_84361913_84362113_84363877_84363993_84401024_84401244_84402202_84402405_84402966_84403156_84404117
ENSMUSG00000018707.14_0	chr12	+	14332	77	FSM	ENSMUSG00000018707.14	ENSMUST00000018851.14	14342	77	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTGCTGTGGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	110567895	110633379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632996
ENSMUSG00000018707.14_56	chr12	+	14061	77	FSM	ENSMUSG00000018707.14	ENST00000644881.2	14073	77	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGTTGGCGGGTGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	110568048	110633236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110568289_110578778_110578867_110580478_110580653_110580786_110581043_110581324_110581512_110582773_110583046_110583131_110583360_110584053_110585131_110585622_110585803_110586732_110586883_110587960_110588108_110590942_110591084_110591860_110592038_110592164_110592276_110592355_110592476_110593292_110593533_110594373_110594530_110594666_110594781_110595157_110595269_110595341_110595552_110595710_110595858_110596010_110596178_110596256_110596431_110596931_110597098_110597177_110597367_110598042_110598238_110599073_110599357_110599586_110599688_110600652_110600813_110601934_110602179_110602328_110602513_110602759_110602973_110603539_110603779_110603929_110604087_110605172_110605401_110606167_110606399_110606579_110606721_110606932_110607167_110607252_110607460_110607535_110607658_110608444_110608611_110609556_110609721_110612627_110612758_110614694_110614829_110615433_110615549_110615648_110615811_110615895_110616111_110616207_110616413_110617924_110618099_110618184_110618305_110618507_110618629_110620583_110620780_110621217_110621336_110621849_110622066_110622718_110622932_110623026_110623155_110623476_110623631_110624275_110624423_110624510_110624662_110624774_110625029_110625106_110625242_110625332_110625428_110625523_110625699_110625874_110625951_110627257_110627419_110627587_110627700_110627788_110627974_110628166_110628281_110628951_110629123_110629275_110629494_110629606_110629711_110630969_110631182_110631516_110631671_110632097_110632241_110632391_110632561_110632727_110632856_110632971
ENSMUSG00000018733.11_0	chr11	-	2706	4	FSM	ENSMUSG00000018733.11	ENSMUST00000018877.9	2729	4	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAAACAAATACCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	83189787	83185474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189665
ENSMUSG00000018733.11_1	chr11	-	2372	4	FSM	ENSMUSG00000018733.11	ENSMUST00000108146.8	2389	4	11	6	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACCATTGACTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	83189757	83185906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83187267_83188313_83188868_83189141_83189380_83189537
ENSMUSG00000018736.15_0	chr11	-	2351	9	FSM	ENSMUSG00000018736.15	ENSMUST00000018880.14	2382	9	12	19	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAGAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	68743949	68712278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68713492_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUSG00000018736.15_1	chr11	-	2153	8	FSM	ENSMUSG00000018736.15	ENST00000380025.8	2174	8	5	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTCACAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68743908	68712283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68713492_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUSG00000018736.15_8	chr11	-	1819	10	FSM	ENSMUSG00000018736.15	ENST00000402554.7	1832	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGGGGCAGCCGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	68743893	68712789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68713492_68716995_68717031_68720740_68720893_68724179_68724272_68726975_68727150_68730696_68730834_68732845_68732995_68734646_68734801_68736152_68736251_68743767
ENSMUSG00000018740.15_0	chr11	+	1817	5	FSM	ENSMUSG00000018740.15	ENSMUST00000102606.10	1828	5	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCAGAGGAAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	68858959	68863334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68859864_68861549_68861616_68862009_68862163_68862494_68862630_68862775
ENSMUSG00000018740.15_1	chr11	+	3640	5	FSM	ENSMUSG00000018740.15	ENSMUST00000018884.6	3648	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGATTTTTAGAGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	68858981	68865191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68859864_68861549_68861616_68862021_68862163_68862494_68862630_68862775
ENSMUSG00000018750.15_0	chr11	+	7799	4	FSM	ENSMUSG00000018750.15	ENSMUST00000108639.8	7811	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGTTAAAAATAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69656747	69674837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69656912_69666201_69666269_69666687_69667716_69668297
ENSMUSG00000018761.15_0	chr11	-	1298	7	FSM	ENSMUSG00000018761.15	ENSMUST00000018905.12	1321	7	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTACAAAATTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	69553457	69547534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69548155_69548245_69548357_69548550_69548670_69548761_69548848_69549391_69549525_69549636_69549703_69553294
ENSMUSG00000018765.6_0	chr11	+	2928	17	FSM	ENSMUSG00000018765.6	ENSMUST00000018909.4	2951	17	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCCTTGTGTTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	69523831	69544116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69524225_69530215_69530269_69531059_69531154_69532107_69532180_69532266_69532416_69532872_69532967_69534663_69534781_69539630_69539802_69539975_69540055_69540553_69540664_69541288_69541376_69541669_69541899_69542064_69542263_69542348_69542550_69542803_69542900_69543035_69543134_69543429
ENSMUSG00000018770.10_0	chr2	-	739	5	FSM	ENSMUSG00000018770.10	ENST00000409194.5	749	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAAAGATGATCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	73741641	73738754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741423_73741595
ENSMUSG00000018770.10_1	chr2	-	674	4	ISM	ENSMUSG00000018770.10	ENST00000409194.5	749	5	235	13	235	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATCATAAAGATGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	73741406	73738757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298
ENSMUSG00000018770.10_4	chr2	-	706	5	FSM	ENSMUSG00000018770.10	ENSMUST00000111996.8	723	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTAATTCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73741662	73738800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741585
ENSMUSG00000018770.10_5	chr2	-	701	5	FSM	ENSMUSG00000018770.10	ENSMUST00000018914.3	714	5	3	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTAATTCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73741667	73738800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73739052_73739527_73739722_73740207_73740286_73741298_73741405_73741595
ENSMUSG00000018774.14_0	chr11	-	1208	6	FSM	ENSMUSG00000018774.14	ENSMUST00000018918.12	1230	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTACTACTCCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69556965	69555046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69555331_69555576_69555748_69555860_69555940_69556072_69556193_69556328_69556763_69556845
ENSMUSG00000018796.14_0	chr8	+	3884	21	FSM	ENSMUSG00000018796.14	ENSMUST00000034046.13	3897	21	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAGAATGTCTTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	46924080	46989082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46924268_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_21	chr8	+	2366	19	FSM	ENSMUSG00000018796.14	ENST00000507295.5	2376	19	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTTATTCTTTCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	46945842	46987859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46946064_46958685_46958804_46961369_46961435_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974304_46974383_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018796.14_6	chr8	+	2446	21	FSM	ENSMUSG00000018796.14	ENST00000513317.5	2458	21	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTGCCTGCAGCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	46943956	46987589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46944199_46945836_46946064_46958685_46958804_46961369_46961435_46964396_46964499_46966327_46966428_46966609_46966789_46971304_46971338_46971485_46971538_46971997_46972072_46974446_46974525_46977979_46978115_46979280_46979416_46980226_46980323_46981616_46981690_46983423_46983513_46984006_46984124_46984824_46984969_46986402_46986505_46986601_46986674_46987376
ENSMUSG00000018800.15_0	chr11	-	8211	39	FSM	ENSMUSG00000018800.15	ENSMUST00000043961.12	8231	39	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTAAAAATCTATGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	110228497	110160207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_110163393_110164151_110164208_110165145_110165226_110166089_110166240_110167279_110167400_110168213_110168309_110168387_110168464_110168996_110169173_110169934_110170027_110170117_110170236_110170451_110170579_110176519_110176612_110177589_110177665_110178407_110178543_110178888_110179003_110180616_110180788_110182911_110183026_110184065_110184204_110184612_110184741_110187293_110187464_110188861_110189064_110190716_110190837_110192238_110192379_110192556_110192648_110193818_110193958_110194918_110195039_110195675_110195852_110197070_110197182_110200215_110200275_110200962_110201132_110202136_110202285_110204154_110204344_110205349_110205492_110208527_110208758_110210619_110210709_110217385_110217548_110218557_110218763_110219962_110220083_110228310
ENSMUSG00000018809.3_0	chr11	+	3504	11	FSM	ENSMUSG00000018809.3	ENSMUST00000044530.3	3517	11	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAACTCTGTATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	75239266	75296526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75239578_75240494_75240641_75273075_75273221_75278236_75278327_75280897_75282054_75290426_75290610_75291107_75291272_75292943_75293077_75293934_75294052_75294242_75294367_75295591
ENSMUSG00000018819.11_0	chr7	+	1694	11	FSM	ENSMUSG00000018819.11	ENSMUST00000105968.8	1727	11	24	9	-13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGGCACTTTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	142014569	142048595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047977
ENSMUSG00000018819.11_1	chr7	+	1657	11	FSM	ENSMUSG00000018819.11	ENSMUST00000018963.11	1695	11	29	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGGCACTTTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	142014611	142048595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_11	chr7	+	1500	11	FSM	ENSMUSG00000018819.11	ENSMUST00000105966.2	1503	11	2	1	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTGGATCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142025889	142048336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142026102_142038215_142038363_142040083_142040243_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_16	chr7	+	1890	11	FSM	ENSMUSG00000018819.11	ENSMUST00000149521.8	1910	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGGGCACTTTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	142030760	142048595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142031104_142038215_142038363_142040083_142040243_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_3	chr7	+	1376	11	FSM	ENSMUSG00000018819.11	ENSMUST00000105967.8	1395	11	15	4	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTGGATCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142014615	142048336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142014704_142038215_142038363_142040083_142040243_142042155_142042253_142042602_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018819.11_6	chr7	+	1818	11	FSM	ENSMUSG00000018819.11	ENSMUST00000038946.9	1828	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTGGATCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142025589	142048336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142026102_142038215_142038363_142040083_142040243_142042155_142042253_142042584_142042678_142042865_142042910_142043061_142043144_142043636_142043772_142044081_142044160_142044295_142044403_142047972
ENSMUSG00000018820.14_0	chr19	+	5581	13	FSM	ENSMUSG00000018820.14	ENSMUST00000169536.8	5611	13	17	13	-10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAGTGGAAACGGC	NA	NA	NA	NA	NA	NA	NA	NA	42159022	42183016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42159225_42159984_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178043_42178821
ENSMUSG00000018820.14_21	chr19	+	1011	9	FSM	ENSMUSG00000018820.14	ENST00000370610.7	1030	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTTGGAGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	42167739	42179896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_3	chr19	+	1265	11	FSM	ENSMUSG00000018820.14	ENST00000359980.5	1280	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTTGGAGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	42159994	42179896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_4	chr19	+	1285	12	FSM	ENSMUSG00000018820.14	ENST00000393677.8	1301	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTTGGAGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	42159995	42179896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172556_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_5	chr19	+	893	8	FSM	ENSMUSG00000018820.14	ENST00000370613.7	911	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTTGGAGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	42159997	42179896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42160183_42171097_42171211_42171866_42172004_42172556_42172629_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018820.14_6	chr19	+	1300	12	FSM	ENSMUSG00000018820.14	ENST00000423811.3	1318	12	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCTTGGAGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	42159997	42179896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42160183_42165827_42165899_42167727_42167930_42169940_42170037_42171097_42171211_42171866_42172004_42172539_42172629_42174058_42174080_42174243_42174389_42177635_42177683_42177960_42178015_42179756
ENSMUSG00000018821.4_0	chr19	-	1030	3	FSM	ENSMUSG00000018821.4	ENSMUST00000018965.4	1044	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGATTTGTCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	42117489	42111716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42112288_42113186_42113466_42117309
ENSMUSG00000018841.18_0	chr11	-	3408	10	FSM	ENSMUSG00000018841.18	ENSMUST00000018985.15	3426	10	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAAAGCGTGGCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	82781432	82767534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82769850_82770010_82770179_82772426_82772498_82772596_82772688_82773712_82773809_82774318_82774454_82774708_82774791_82780517_82780637_82780795_82780858_82781163
ENSMUSG00000018845.15_0	chr11	+	4120	20	FSM	ENSMUSG00000018845.15	ENSMUST00000108160.8	4152	20	28	4	28	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACAGAGAGGTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	82801403	82834225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82802080_82802505_82802674_82803220_82803258_82804029_82804206_82805875_82805966_82807857_82808026_82808554_82808724_82810549_82810721_82813573_82813746_82816712_82817014_82819480_82819576_82819757_82819906_82820246_82820388_82824657_82824786_82825570_82825638_82827199_82827314_82827649_82827766_82828561_82828680_82831014_82831171_82833316
ENSMUSG00000018846.9_0	chr11	+	7350	7	FSM	ENSMUSG00000018846.9	ENSMUST00000018990.8	7376	7	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACATGTGTCTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35660330	35682106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_35660775_35666912_35667266_35668393_35668648_35669402_35669580_35672410_35672535_35674274_35674401_35676234
ENSMUSG00000018848.5_0	chr11	-	2100	15	FSM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTATGCCAGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35725331	35699214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998_35724134_35725263
ENSMUSG00000018848.5_1	chr11	-	2033	14	ISM	ENSMUSG00000018848.5	ENSMUST00000018992.4	2109	15	1199	7	1199	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTATGCCAGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35724134	35699214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_35699419_35699921_35700170_35700454_35700628_35706465_35706572_35707463_35707574_35708176_35708356_35710700_35710806_35711922_35712053_35715222_35715344_35716813_35716936_35717303_35717405_35718184_35718294_35719451_35719641_35723998
ENSMUSG00000018849.7_0	chr11	-	4516	23	FSM	ENSMUSG00000018849.7	ENSMUST00000018993.7	4531	23	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCTTCTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	35871346	35729233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_35730072_35731136_35731259_35732580_35732815_35734981_35735075_35743020_35743186_35744186_35744305_35750922_35751015_35752635_35752777_35758061_35758255_35759923_35760011_35761300_35761382_35761742_35761852_35766440_35766980_35767355_35767446_35774074_35774318_35778889_35778964_35780086_35780234_35782275_35782406_35788202_35788283_35789445_35789523_35801002_35801207_35806002_35806113_35870797
ENSMUSG00000018858.16_0	chr11	+	2586	6	FSM	ENSMUSG00000018858.16	ENSMUST00000153983.8	2596	6	10	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGTTTCACTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	115294587	115303500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115294787_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_2	chr11	+	733	6	FSM	ENSMUSG00000018858.16	ENSMUST00000103036.5	749	6	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACAGGAGCCTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115294588	115301735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115294700_115297376_115297414_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018858.16_3	chr11	+	624	5	FSM	ENSMUSG00000018858.16	ENST00000301585.10	638	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCGGCCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115294603	115301543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115294835_115300305_115300366_115300885_115300969_115301057_115301228_115301463
ENSMUSG00000018861.9_0	chr11	-	1932	12	FSM	ENSMUSG00000018861.9	ENSMUST00000021078.3	1948	12	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCATGGCTGATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	115167864	115158853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167634
ENSMUSG00000018861.9_17	chr11	-	1410	11	ISM	ENSMUSG00000018861.9	ENST00000413947.6	1472	12	130	6	1	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTACCGTGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	115167001	115159138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904
ENSMUSG00000018861.9_6	chr11	-	1379	11	FSM	ENSMUSG00000018861.9	ENST00000582944.5	1393	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTACCGTGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	115166994	115159138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162802_115163012_115163109_115166904
ENSMUSG00000018861.9_7	chr11	-	1318	10	FSM	ENSMUSG00000018861.9	ENST00000583917.5	1332	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTACCGTGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	115166994	115159138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904
ENSMUSG00000018861.9_8	chr11	-	1466	12	FSM	ENSMUSG00000018861.9	ENST00000413947.6	1472	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCTACCGTGCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	115167131	115159138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115159281_115159403_115159575_115160270_115160443_115160522_115160723_115160840_115160926_115161148_115161257_115162087_115162190_115162482_115162597_115162702_115162826_115163012_115163109_115166904_115167009_115167082
ENSMUSG00000018882.13_0	chr11	+	2417	8	FSM	ENSMUSG00000018882.13	ENSMUST00000019026.10	2431	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCATACCCAGCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97206550	97220741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97206766_97207572_97207751_97212268_97212387_97214676_97214776_97216534_97216584_97217607_97217758_97218911_97219086_97219307
ENSMUSG00000018893.16_0	chr15	-	1046	4	FSM	ENSMUSG00000018893.16	ENSMUST00000166179.9	1058	4	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTGTCTCCGTCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	76934860	76899688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76900273_76901775_76901999_76906688_76906792_76934724
ENSMUSG00000018893.16_1	chr15	-	1084	3	FSM	ENSMUSG00000018893.16	ENSMUST00000169226.9	1104	3	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCAATTCTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76906972	76899695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76900273_76901775_76901999_76906688
ENSMUSG00000018899.18_0	chr11	+	2119	10	FSM	ENSMUSG00000018899.18	ENSMUST00000108920.10	2136	10	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	53660855	53668147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53661105_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018899.18_3	chr11	+	2039	10	FSM	ENSMUSG00000018899.18	ENSMUST00000019043.13	2069	10	28	2	28	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCGTGTGGCTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	53661348	53668147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53661518_53662109_53662202_53663664_53663765_53664481_53664659_53664751_53664802_53664887_53665021_53665171_53665295_53665879_53665930_53666743_53666880_53667138
ENSMUSG00000018900.8_0	chr11	-	3048	10	FSM	ENSMUSG00000018900.8	ENSMUST00000019044.8	3062	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATACCAATTGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	53782479	53755374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53756723_53757062_53757199_53758348_53758532_53760047_53760263_53762393_53762495_53764493_53764621_53765760_53765933_53766834_53766990_53774486_53774591_53781972
ENSMUSG00000018906.15_0	chr11	+	2252	16	FSM	ENSMUSG00000018906.15	ENSMUST00000093107.12	2263	16	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTTAAATAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	53991756	54022474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017063_54017124_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018906.15_11	chr11	+	2104	15	FSM	ENSMUSG00000018906.15	ENST00000379104.7	2104	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53991816	54022508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53991867_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018906.15_14	chr11	+	2149	15	ISM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	556	4	528	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTTAAATAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	53992344	54022474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018906.15_16	chr11	+	2048	14	ISM	ENSMUSG00000018906.15	ENST00000379104.7	2104	15	9224	0	9224	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGTTGTTATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	54001040	54022508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018906.15_6	chr11	+	2221	16	FSM	ENSMUSG00000018906.15	ENSMUST00000019050.12	2230	16	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCCTTAAATAGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	53991793	54022474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53991867_53992345_53992474_54001034_54001141_54001811_54001909_54002248_54002401_54004962_54005101_54008269_54008510_54009959_54010154_54010895_54011073_54015482_54015554_54015771_54015872_54016588_54016643_54017171_54017238_54019873_54019943_54020291_54020389_54022015
ENSMUSG00000018909.16_0	chr7	+	7117	16	FSM	ENSMUSG00000018909.16	ENSMUST00000098266.9	7132	16	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAGGACACTGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	99184678	99255969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_99185006_99231467_99231499_99232866_99232928_99236421_99236467_99237204_99237402_99238101_99238162_99238857_99238926_99240469_99240606_99241710_99241796_99242196_99242270_99243827_99243966_99245229_99245314_99246242_99246267_99247697_99247769_99249007_99249060_99250304
ENSMUSG00000018920.12_0	chr11	-	2682	5	FSM	ENSMUSG00000018920.12	ENSMUST00000019064.9	2699	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTAGTGACTTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70350797	70344812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70346271_70346480_70346889_70349570_70349654_70349854_70349994_70350203
ENSMUSG00000018923.14_0	chr11	+	884	3	FSM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCTAAGAGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	70342757	70344548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70342890_70343033_70343165_70343927
ENSMUSG00000018923.14_16	chr11	+	371	1	ISM	ENSMUSG00000018923.14	ENSMUST00000019067.8	902	3	1183	255	1123	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACCCTGCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70343927	70344298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70343900_70344300
ENSMUSG00000018923.14_3	chr11	+	458	3	FSM	ENSMUSG00000018923.14	ENST00000575284.5	468	3	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGAGTTCGGATGATC	NA	NA	NA	NA	NA	NA	NA	NA	70342808	70344057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70342890_70343033_70343165_70343811
ENSMUSG00000018923.14_6	chr11	+	452	2	FSM	ENSMUSG00000018923.14	ENST00000674339.1	457	2	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACCCTGCCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70342808	70344298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70342890_70343927
ENSMUSG00000018931.4_0	chr11	-	4163	3	FSM	ENSMUSG00000018931.4	ENSMUST00000019075.4	4179	3	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACACACACACAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60804631	60793080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60796948_60797707_60797827_60804454
ENSMUSG00000018932.10_0	chr11	+	2180	12	FSM	ENSMUSG00000018932.10	ENSMUST00000019076.10	2198	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTGTGGCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60822868	60843629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60823098_60832705_60832773_60833130_60833180_60833976_60834091_60834312_60834433_60835490_60835608_60836336_60836389_60837469_60837598_60837936_60838015_60840746_60840887_60841983_60842030_60842589
ENSMUSG00000018965.12_0	chr5	+	1749	2	FSM	ENSMUSG00000018965.12	ENSMUST00000019109.8	1764	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5957	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATCTGTGCCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	33176168	33185304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33176499_33183885
ENSMUSG00000018974.8_0	chr5	-	4433	19	FSM	ENSMUSG00000018974.8	ENSMUST00000019118.8	4447	19	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGCCTTGTGCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	113910561	113880510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113881365_113882604_113882796_113883107_113883261_113883640_113884093_113884684_113884854_113885983_113886061_113886822_113886936_113889263_113889374_113890274_113890334_113890451_113890530_113891658_113891767_113892293_113892433_113893430_113893587_113896199_113896325_113897281_113897334_113899155_113899341_113900889_113900995_113902133_113902261_113909381
ENSMUSG00000018983.10_0	chr4	+	4723	7	FSM	ENSMUSG00000018983.10	ENSMUST00000061721.6	4739	7	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTGTCTTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	135899717	135923365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135900350_135905746_135905853_135907668_135907889_135908596_135908756_135911733_135911849_135914109_135914303_135920067
ENSMUSG00000018995.13_0	chr7	+	3763	14	FSM	ENSMUSG00000018995.13	ENSMUST00000044466.12	3778	14	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGAATACTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	96600719	96713958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_96601152_96605150_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706753_96708992_96709020_96711775
ENSMUSG00000018995.13_4	chr7	+	1534	12	FSM	ENSMUSG00000018995.13	ENST00000528850.5	1548	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGGACTGGGCATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	96605149	96712161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_96605261_96607281_96607403_96608877_96609019_96622688_96622770_96652004_96652100_96672824_96672958_96680544_96680644_96680752_96680791_96684437_96684505_96689105_96689244_96706654_96706779_96711775
ENSMUSG00000018999.15_0	chr6	-	6243	10	FSM	ENSMUSG00000018999.15	ENSMUST00000019143.9	6253	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTGTCCAATCACCATT	NA	NA	NA	NA	NA	NA	NA	NA	34154037	34130315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34135562_34136367_34136444_34137407_34137484_34138610_34138721_34140263_34140325_34140523_34140606_34143308_34143359_34144559_34144663_34147395_34147510_34153712
ENSMUSG00000019039.15_0	chr9	+	1734	12	FSM	ENSMUSG00000019039.15	ENSMUST00000019183.14	1746	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATTGTGAGAGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	108447089	108449966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108447275_108447348_108447645_108447762_108448014_108448090_108448171_108448243_108448373_108448644_108448719_108448811_108448874_108448980_108449064_108449139_108449317_108449385_108449497_108449591_108449661_108449749
ENSMUSG00000019054.14_0	chr5	+	935	5	FSM	ENSMUSG00000019054.14	ENSMUST00000111094.8	948	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	136982141	136995086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136982445_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUSG00000019054.14_1	chr5	+	775	5	FSM	ENSMUSG00000019054.14	ENSMUST00000019198.7	786	5	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCTGTGTGTGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	136990939	136995086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136991083_136991852_136991986_136993946_136994024_136994418_136994525_136994770
ENSMUSG00000019055.16_0	chr4	-	3231	19	FSM	ENSMUSG00000019055.16	ENSMUST00000019199.14	3243	19	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACCGGTCTGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	148021216	147994213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147995332_147997676_147997803_148000253_148000401_148001761_148001867_148002590_148002657_148003236_148003351_148004625_148004768_148005463_148005590_148005854_148005960_148007580_148007703_148009973_148010106_148010603_148010706_148011479_148011578_148012914_148012979_148013996_148014110_148015578_148015743_148016083_148016221_148017187_148017280_148021058
ENSMUSG00000019066.14_0	chr9	-	3825	5	FSM	ENSMUSG00000019066.14	ENSMUST00000115351.10	3835	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATATTGCTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	21829478	21818786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827240_21829317
ENSMUSG00000019066.14_3	chr9	-	3857	5	FSM	ENSMUSG00000019066.14	ENSMUST00000122211.8	3886	5	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGTATAATAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	21829426	21818825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21821968_21825940_21826066_21826158_21826278_21827000_21827363_21829317
ENSMUSG00000019080.9_0	chr15	+	2232	5	FSM	ENSMUSG00000019080.9	ENSMUST00000019224.9	2246	5	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCTGAGTCTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76585675	76588436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76586551_76586843_76586992_76587078_76587204_76587273_76587384_76587462
ENSMUSG00000019082.19_0	chr7	-	2792	10	FSM	ENSMUSG00000019082.19	ENSMUST00000019226.14	2811	10	13	6	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGCTTTAAGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	141017792	141009662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141011172_141011262_141011339_141011414_141011570_141011651_141011827_141011933_141012053_141012575_141012667_141013493_141013550_141013812_141013939_141014068_141014243_141017481
ENSMUSG00000019087.14_0	chrX	+	2175	10	FSM	ENSMUSG00000019087.14	ENSMUST00000019231.12	2189	10	11	3	11	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAACAGTAGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73340713	73348324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73340928_73341228_73341356_73343855_73343931_73344183_73344378_73344929_73344971_73345541_73345628_73345967_73346207_73346827_73346876_73346963_73347193_73347402
ENSMUSG00000019088.15_0	chrX	-	1612	8	FSM	ENSMUSG00000019088.15	ENSMUST00000239458.2	1625	8	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGTATGCTTAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	73325330	73316823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325126
ENSMUSG00000019088.15_1	chrX	-	1504	8	FSM	ENSMUSG00000019088.15	ENSMUST00000075821.10	1511	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTTGCATGTATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	73325943	73316830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73317298_73317383_73317633_73317711_73317825_73317973_73318075_73320084_73320163_73320251_73320341_73320644_73320949_73325840
ENSMUSG00000019088.15_4	chrX	-	738	3	FSM	ENSMUSG00000019088.15	ENSMUST00000114189.10	755	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGGAAAAACCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	73325196	73316933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73317298_73320644_73320949_73325126
ENSMUSG00000019102.11_0	chr11	+	1698	11	FSM	ENSMUSG00000019102.11	ENSMUST00000108716.8	1721	11	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTCGTGCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	61099458	61109236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61099608_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ENSMUSG00000019102.11_7	chr11	+	1705	11	FSM	ENSMUSG00000019102.11	ENSMUST00000019246.4	1729	11	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAGTCGTGCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	61099583	61109236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61099740_61103052_61103220_61104276_61104509_61105010_61105097_61105375_61105585_61106315_61106434_61107104_61107247_61107906_61108074_61108488_61108589_61108816_61108948_61109039
ENSMUSG00000019122.9_0	chr11	-	3001	4	FSM	ENSMUSG00000019122.9	ENSMUST00000019266.6	3006	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGGTTGTCTTGGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83469457	83463744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83466322_83466668_83466778_83467200_83467273_83469214
ENSMUSG00000019124.11_0	chr6	-	4788	8	FSM	ENSMUSG00000019124.11	ENSMUST00000019268.11	4810	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAATACCTAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54543461	54482883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54486348_54489033_54489215_54497684_54497851_54499744_54499940_54502493_54502697_54511397_54511580_54525208_54525369_54543224
ENSMUSG00000019132.12_0	chr13	+	5831	5	FSM	ENSMUSG00000019132.12	ENSMUST00000019276.12	5849	5	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAACCTTACAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	24985653	25000176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_24987493_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ENSMUSG00000019132.12_2	chr13	+	736	5	FSM	ENSMUSG00000019132.12	ENST00000378102.3	754	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGCAGCTATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	24986005	24996782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_24986144_24988764_24988942_24989844_24989968_24993868_24994004_24996619
ENSMUSG00000019139.11_0	chr8	+	1832	11	FSM	ENSMUSG00000019139.11	ENSMUST00000019283.10	1836	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71047130	71049934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71047194_71047269_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUSG00000019139.11_2	chr8	+	1770	10	FSM	ENSMUSG00000019139.11	ENSMUST00000210005.2	1914	10	138	6	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71047268	71049934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71047399_71047472_71047635_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUSG00000019139.11_6	chr8	+	1463	9	FSM	ENSMUSG00000019139.11	ENST00000457269.8	1482	9	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGCACCCGCAGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	71047282	71049803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71047399_71047788_71047922_71048010_71048205_71048354_71048505_71048599_71048816_71048897_71049063_71049145_71049260_71049343_71049562_71049646
ENSMUSG00000019143.16_0	chr18	+	3301	13	FSM	ENSMUSG00000019143.16	ENSMUST00000152954.8	3336	13	13	22	13	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAACAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	36916073	36925593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_8	chr18	+	1839	10	FSM	ENSMUSG00000019143.16	ENST00000503873.6	1853	10	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAAAGTAATTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36916403	36924782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36916548_36918617_36918696_36918921_36919042_36920951_36921060_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019143.16_9	chr18	+	1509	12	FSM	ENSMUSG00000019143.16	ENST00000508522.5	1523	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGGTGGACTTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	36916431	36924237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36916548_36918921_36919042_36919163_36919260_36920554_36920681_36920951_36921060_36921218_36921318_36921629_36921724_36922209_36922338_36922419_36922663_36923186_36923304_36923521_36923669_36924122
ENSMUSG00000019146.3_0	chr15	-	5480	4	FSM	ENSMUSG00000019146.3	ENSMUST00000019290.3	5510	4	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCACTTCCATGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	78004198	77875947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77879885_77881050_77881192_77897512_77897597_78002880
ENSMUSG00000019158.10_0	chr7	+	806	3	FSM	ENSMUSG00000019158.10	ENSMUST00000019302.10	815	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAGACTCTGAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	16186711	16189414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16187096_16188045_16188139_16189085
ENSMUSG00000019173.12_0	chr11	-	1902	6	FSM	ENSMUSG00000019173.12	ENSMUST00000107364.8	1915	6	5	8	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTATTTGAAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	100629036	100605842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100606989_100607583_100607678_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019173.12_1	chr11	-	1932	6	FSM	ENSMUSG00000019173.12	ENSMUST00000019317.12	1967	6	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTATTTGAAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	100629012	100605842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100606989_100607583_100607732_100608667_100608791_100609256_100609409_100610740_100610995_100628903
ENSMUSG00000019179.11_1	chr5	+	1443	9	FSM	ENSMUSG00000019179.11	ENSMUST00000019323.11	1456	9	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCTGTAGATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	135807344	135819243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135807656_135812158_135812328_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019179.11_11	chr5	+	902	8	FSM	ENSMUSG00000019179.11	ENST00000443006.5	920	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGAGGTGTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	135807529	135819056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135807656_135813037_135813122_135814782_135814893_135815086_135815213_135816394_135816473_135818054_135818155_135818479_135818632_135818930
ENSMUSG00000019188.17_0	chr2	+	5194	12	FSM	ENSMUSG00000019188.17	ENSMUST00000125366.8	5204	12	10	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGTCTCTTCTTATTCGT	NA	NA	NA	NA	NA	NA	NA	NA	152511390	152550590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152546541
ENSMUSG00000019188.17_10	chr2	+	1670	13	FSM	ENSMUSG00000019188.17	ENST00000398174.9	1687	13	11	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCCGCTAGGCCACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	152511403	152546932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546062_152546541
ENSMUSG00000019188.17_17	chr2	+	1732	13	FSM	ENSMUSG00000019188.17	ENSMUST00000089059.9	1743	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGCTCTCAGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	152511418	152546956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152511685_152519461_152519561_152522970_152523054_152528017_152528107_152530582_152530669_152530756_152530883_152531763_152531822_152533712_152533797_152536406_152536444_152537401_152537505_152542102_152542189_152545914_152546115_152546541
ENSMUSG00000019189.14_0	chr11	+	3553	11	FSM	ENSMUSG00000019189.14	ENSMUST00000019333.10	3570	11	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGATAACCGTTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	44409798	44456338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44410102_44415754_44415971_44422102_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454746
ENSMUSG00000019189.14_5	chr11	+	1764	9	FSM	ENSMUSG00000019189.14	ENST00000616872.1	1771	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGCTGGAGAGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	44422108	44455049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44422212_44433455_44433548_44439590_44439827_44442470_44442647_44445964_44446106_44448082_44448266_44450798_44450947_44452291_44452649_44454721
ENSMUSG00000019194.16_2	chr7	-	669	5	FSM	ENSMUSG00000019194.16	ENST00000595652.5	685	5	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGGCGGTGAGGCGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	30824634	30816289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30816562_30816648_30816721_30817130_30817273_30822330_30822359_30824479
ENSMUSG00000019194.16_7	chr7	-	527	3	FSM	ENSMUSG00000019194.16	ENST00000640135.1	547	3	13	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCACATTCCGGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	30824636	30820748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30820814_30822266_30822572_30824479
ENSMUSG00000019210.11_0	chr6	-	1295	9	FSM	ENSMUSG00000019210.11	ENSMUST00000019354.11	1312	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGATTTAGTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120799744	120772211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120781003_120781094_120784546_120784614_120785322_120785433_120795294_120795361_120799548
ENSMUSG00000019210.11_6	chr6	-	989	7	FSM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATTAAAACAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120795361	120772232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120784546_120784614_120785322_120785433_120795294
ENSMUSG00000019210.11_7	chr6	-	919	6	ISM	ENSMUSG00000019210.11	ENST00000399796.6	1001	7	9933	11	9933	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATTAAAACAGAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120785429	120772232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_120772726_120774837_120774926_120778003_120778099_120780268_120780338_120784546_120784614_120785322
ENSMUSG00000019214.15_0	chr17	-	3193	22	FSM	ENSMUSG00000019214.15	ENSMUST00000170070.3	3208	22	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTGTGAGTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25946376	25937906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946098_25946220
ENSMUSG00000019214.15_3	chr17	-	3198	22	FSM	ENSMUSG00000019214.15	ENSMUST00000048054.14	3214	22	9	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTGTGAGTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	25946384	25937906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25938259_25938341_25938400_25938625_25938758_25938838_25938984_25939573_25939705_25939797_25939948_25940032_25940258_25941064_25941213_25941619_25941751_25941817_25941917_25942193_25942288_25942376_25942526_25942616_25942741_25942976_25943075_25943502_25943713_25944469_25944609_25944715_25944769_25944853_25944947_25945348_25945524_25945674_25945823_25945914_25946095_25946220
ENSMUSG00000019230.15_0	chr1	-	4914	5	FSM	ENSMUSG00000019230.15	ENSMUST00000019374.14	4937	5	13	10	13	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATAAGATACTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	138770182	138752933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138756449_138760439_138760643_138766080_138766437_138767610_138767814_138769545
ENSMUSG00000019230.15_1	chr1	-	3634	7	FSM	ENSMUSG00000019230.15	ENSMUST00000046870.13	3645	7	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAAGGAGTTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	138775453	138756890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138759363_138760439_138760643_138766080_138766437_138767610_138767814_138769545_138769665_138774913_138774986_138775244
ENSMUSG00000019230.15_2	chr1	-	310	2	FSM	ENSMUSG00000019230.15	ENST00000367388.4	323	2	7	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCGGTAAGGACCAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	138770192	138769550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138769665_138769996
ENSMUSG00000019254.17_0	chr7	-	2961	22	FSM	ENSMUSG00000019254.17	ENSMUST00000013886.9	2983	22	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGACTTTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4504662	4484523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485893_4485971_4486013_4486101_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019254.17_21	chr7	-	2101	20	FSM	ENSMUSG00000019254.17	ENST00000435544.6	2119	20	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCATAACCTCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	4500537	4484968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486185_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414
ENSMUSG00000019254.17_6	chr7	-	2949	21	FSM	ENSMUSG00000019254.17	ENST00000263433.8	2970	21	9	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCATAAATAAAGTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	4504679	4484546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4485158_4485235_4485287_4485377_4485429_4485582_4485688_4485789_4485912_4486088_4486188_4486339_4486401_4486472_4486557_4486641_4486733_4486939_4487072_4487448_4487517_4487617_4487771_4488009_4488084_4488187_4488316_4488387_4488462_4489356_4489432_4489509_4489655_4492731_4492892_4500215_4500335_4500414_4500546_4504264
ENSMUSG00000019256.18_0	chr12	-	5523	11	FSM	ENSMUSG00000019256.18	ENSMUST00000116436.9	5548	11	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATATAAATAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	35585024	35547984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_35550700_35553711_35554976_35556243_35556386_35557418_35557529_35558128_35558332_35559964_35560096_35561057_35561170_35562857_35562948_35565019_35565124_35576679_35576868_35584560
ENSMUSG00000019261.4_0	chr8	+	3304	7	FSM	ENSMUSG00000019261.4	ENSMUST00000019405.4	3314	7	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTGGTCTTACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	71358584	71370170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71358772_71363588_71363694_71364489_71364573_71365156_71365298_71365549_71367639_71368994_71369219_71369695
ENSMUSG00000019278.6_0	chr8	+	2229	11	FSM	ENSMUSG00000019278.6	ENSMUST00000019422.6	2236	11	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAATGGCCAATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	123912980	123928544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123913181_123920771_123920926_123925452_123925586_123925783_123925917_123926032_123926184_123926360_123926431_123926679_123926857_123926945_123927031_123927105_123927182_123927376_123927513_123927630
ENSMUSG00000019295.9_0	chr5	-	2815	4	FSM	ENSMUSG00000019295.9	ENSMUST00000019439.9	2828	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGTACTTCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33815753	33810565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33811959_33812056_33812217_33812666_33813142_33814966
ENSMUSG00000019295.9_1	chr5	-	1143	3	FSM	ENSMUSG00000019295.9	ENST00000303277.6	1155	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCATCACAGTATGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33815387	33811711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33811959_33812666_33813142_33814966
ENSMUSG00000019297.10_0	chr14	+	3680	10	FSM	ENSMUSG00000019297.10	ENSMUST00000019441.9	3694	10	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCAGTTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55983163	55992957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55983478_55983617_55984068_55986788_55986900_55987448_55987591_55988509_55988703_55989514_55989656_55989993_55990120_55990268_55990506_55990716_55990823_55991097
ENSMUSG00000019302.17_0	chr11	+	2713	21	FSM	ENSMUSG00000019302.17	ENSMUST00000103110.10	2716	21	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCCAGAGCAGCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	100900277	100953247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917485_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUSG00000019302.17_1	chr11	+	3981	22	FSM	ENSMUSG00000019302.17	ENSMUST00000044721.13	4008	22	15	12	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTCAGAAAAGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100900292	100954533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100900391_100902582_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100940284_100940303_100945851_100945970_100946259_100946432_100953137
ENSMUSG00000019302.17_11	chr11	+	2456	19	FSM	ENSMUSG00000019302.17	ENST00000537728.5	2470	19	11	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGGATGCCTGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	100902644	100953315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100902764_100909389_100909469_100911298_100911397_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUSG00000019302.17_17	chr11	+	3788	20	FSM	ENSMUSG00000019302.17	ENSMUST00000092663.4	3813	20	19	6	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGCTGCCTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	100902665	100954539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100902764_100909389_100909469_100911298_100911397_100911879_100912009_100917506_100917590_100918092_100918220_100920001_100920085_100921235_100921330_100924726_100924940_100927547_100927699_100928984_100929125_100929515_100929674_100930646_100930738_100933775_100933895_100934616_100934834_100935341_100935450_100939243_100939352_100945851_100945970_100946259_100946432_100953137
ENSMUSG00000019303.15_0	chr11	-	1272	8	FSM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAATGCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100986253	100982658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983_100986085_100986168
ENSMUSG00000019303.15_1	chr11	-	1189	7	ISM	ENSMUSG00000019303.15	ENSMUST00000019447.15	1291	8	176	10	176	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATGTAATGCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100986086	100982658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_100983283_100983357_100983418_100983549_100983604_100983688_100983835_100984506_100984619_100985761_100985852_100985983
ENSMUSG00000019312.11_0	chr11	+	2213	15	FSM	ENSMUSG00000019312.11	ENST00000309156.9	2224	15	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATCTGTGAGTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98337882	98346194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98338076_98341547_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345223_98345312_98345408_98345503_98345684
ENSMUSG00000019312.11_7	chr11	+	1509	13	FSM	ENSMUSG00000019312.11	ENST00000394204.1	1523	13	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCGCACAAGCTACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98341606	98345830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98341749_98341853_98342005_98342131_98342289_98342420_98342543_98342667_98342746_98342944_98343095_98344006_98344118_98344320_98344420_98344618_98344700_98344797_98344915_98345046_98345108_98345408_98345503_98345684
ENSMUSG00000019326.15_0	chr11	+	4363	4	FSM	ENSMUSG00000019326.15	ENSMUST00000103105.10	4397	4	25	9	25	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTAACTGTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	101221455	101230247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101223366_101226542_101226829_101227174_101227305_101228210
ENSMUSG00000019338.14_0	chr3	-	4626	9	FSM	ENSMUSG00000019338.14	ENSMUST00000019482.8	4632	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTGTGTTTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	94922543	94914012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94915278_94915382_94915525_94915690_94915804_94915895_94916229_94916386_94916550_94916653_94916831_94917354_94917534_94917655_94919788_94922421
ENSMUSG00000019359.15_0	chrX	+	1947	15	FSM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGCCAAGATAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99773741	99782168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99773802_99775677_99775792_99776001_99776106_99776399_99776494_99776677_99776738_99776979_99777079_99777251_99777346_99777504_99777654_99777775_99777859_99777969_99778121_99779856_99780079_99780294_99780444_99781070_99781219_99781356_99781444_99781835
ENSMUSG00000019359.15_6	chrX	+	1885	14	ISM	ENSMUSG00000019359.15	ENST00000374382.4	1955	15	1939	7	1888	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGCCAAGATAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	99775679	99782168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_99775792_99776001_99776106_99776399_99776494_99776677_99776738_99776979_99777079_99777251_99777346_99777504_99777654_99777775_99777859_99777969_99778121_99779856_99780079_99780294_99780444_99781070_99781219_99781356_99781444_99781835
ENSMUSG00000019362.9_0	chr8	-	604	3	FSM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGCTGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84976339	84972869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84973323_84976102_84976159_84976244
ENSMUSG00000019362.9_1	chr8	-	510	2	ISM	ENSMUSG00000019362.9	ENSMUST00000019506.9	616	3	189	3	189	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGCTGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84976159	84972869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84973323_84976102
ENSMUSG00000019370.11_0	chr7	-	2274	6	FSM	ENSMUSG00000019370.11	ENSMUST00000019514.10	2290	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCTGTCTGGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	16658029	16649309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16653559_16653591_16657765
ENSMUSG00000019370.11_3	chr7	-	545	5	FSM	ENSMUSG00000019370.11	ENST00000598871.5	554	5	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTTCTCGCGCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	16657861	16650839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651654_16657765
ENSMUSG00000019370.11_4	chr7	-	436	4	ISM	ENSMUSG00000019370.11	ENST00000594523.5	534	6	6187	0	6187	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16651647	16650846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509
ENSMUSG00000019370.11_5	chr7	-	530	6	FSM	ENSMUSG00000019370.11	ENST00000594523.5	534	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGATCTCTTCTCGCG	NA	NA	NA	NA	NA	NA	NA	NA	16657830	16650846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16650902_16650999_16651136_16651310_16651418_16651509_16651646_16653559_16653591_16657765
ENSMUSG00000019373.12_0	chr11	-	1636	12	FSM	ENSMUSG00000019373.12	ENSMUST00000019517.10	1646	12	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTAATGTGTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	59730656	59708622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59708935_59709244_59709326_59710830_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718671_59718852_59720972_59721066_59723709_59723760_59723857_59723971_59727716_59727847_59730495
ENSMUSG00000019373.12_6	chr11	-	1003	9	FSM	ENSMUSG00000019373.12	ENST00000505334.1	1021	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATCGACCAAGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59727836	59710847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59710945_59712125_59712213_59715100_59715275_59717115_59717257_59718687_59718852_59720972_59721066_59723709_59723760_59723893_59723971_59727716
ENSMUSG00000019428.17_0	chr8	+	1708	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119353.9	1720	9	4	8	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	70980377	70987970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984174_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_12	chr8	+	1783	9	FSM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	70980504	70987970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70980686_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_16	chr8	+	1597	8	ISM	ENSMUSG00000019428.17	ENSMUST00000119698.8	1799	9	1545	12	1545	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACACCCTACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70982040	70987965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_2	chr8	+	1686	9	FSM	ENSMUSG00000019428.17	ENSMUST00000075491.14	1698	9	6	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTACTGCTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	70980402	70987970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70980487_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019428.17_8	chr8	+	1522	9	FSM	ENSMUSG00000019428.17	ENST00000608443.6	1530	9	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTTTCTATCCCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	70980408	70987808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70980491_70982040_70982326_70983589_70983760_70983834_70983924_70984171_70984393_70985226_70985400_70986766_70986845_70987132_70987265_70987516
ENSMUSG00000019432.16_0	chr17	+	1728	11	FSM	ENSMUSG00000019432.16	ENSMUST00000068056.12	1739	11	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTCTGTTCATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	35460730	35472681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35460829_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019432.16_12	chr17	+	2792	10	FSM	ENSMUSG00000019432.16	ENSMUST00000173731.8	2848	10	49	7	49	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGAAACAACCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	35460894	35472649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019432.16_17	chr17	+	1743	11	FSM	ENSMUSG00000019432.16	ENSMUST00000172549.2	1770	11	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAACTAAGAATGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	35461657	35472640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35461812_35462088_35462427_35463111_35463240_35463431_35463525_35465912_35466097_35467926_35468046_35470222_35470355_35471722_35471833_35471939_35472085_35472182_35472331_35472448
ENSMUSG00000019433.10_0	chr8	+	1521	7	FSM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCATTCTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	84379306	84391323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84379367_84387587_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUSG00000019433.10_2	chr8	+	1458	6	ISM	ENSMUSG00000019433.10	ENSMUST00000019577.10	1522	7	8285	0	8285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACTCATTCTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	84387590	84391323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_84387910_84388583_84388770_84388863_84389045_84389677_84389791_84390548_84390631_84390746
ENSMUSG00000019437.18_0	chr11	+	722	4	FSM	ENSMUSG00000019437.18	ENST00000394933.7	733	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGAAAGTAGAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	78068885	78071151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78069063_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019437.18_1	chr11	+	2684	4	FSM	ENSMUSG00000019437.18	ENSMUST00000092880.14	2700	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGCTCAATTGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	78069485	78072728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78070048_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019437.18_2	chr11	+	1396	4	FSM	ENSMUSG00000019437.18	ENSMUST00000127587.8	1412	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAATCAAGTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	78069519	78071639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78069883_78070195_78070279_78070365_78070449_78070772
ENSMUSG00000019437.18_6	chr11	+	527	5	NNC	ENSMUSG00000019437.18	novel	2700	4	NA	NA	2173	1642	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATGGCCCAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	78071760	78074377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_78071824_78071979_78072052_78072244_78072419_78073627_78073813_78074344
ENSMUSG00000019461.13_0	chr11	+	1822	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108632.8	1835	8	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTAGAAGCCGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	69737214	69741862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69737349_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_2	chr11	+	2777	8	FSM	ENSMUSG00000019461.13	ENSMUST00000108633.9	2785	8	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCGGTGATTATGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	69737447	69742881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69737518_69737733_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019461.13_3	chr11	+	1850	7	FSM	ENSMUSG00000019461.13	ENSMUST00000019605.4	1927	7	74	3	74	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAAGCCGGATGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	69737575	69741866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69737902_69738160_69738400_69738482_69738526_69738628_69738850_69739039_69739202_69740837_69741000_69741169
ENSMUSG00000019464.7_0	chr8	+	4674	3	FSM	ENSMUSG00000019464.7	ENSMUST00000019608.7	4694	3	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGAGCTTTTGTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	84393323	84399379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84393546_84394507_84395476_84395895
ENSMUSG00000019467.16_0	chr10	-	2463	15	FSM	ENSMUSG00000019467.16	ENSMUST00000218654.2	2475	15	7	5	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACTGAGGTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	127024634	127018399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127024119
ENSMUSG00000019467.16_1	chr10	-	2201	16	FSM	ENSMUSG00000019467.16	ENSMUST00000019611.15	2218	16	15	2	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACTGAGGTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	127025873	127018399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025735
ENSMUSG00000019467.16_6	chr10	-	2173	16	FSM	ENSMUSG00000019467.16	ENSMUST00000167353.3	2189	16	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCACTGAGGTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	127025676	127018399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127018813_127019066_127019279_127019517_127019699_127019880_127020082_127020260_127020339_127020531_127020583_127020755_127020849_127020951_127021042_127021155_127021226_127021443_127021548_127021728_127021796_127021951_127022029_127022747_127022844_127022976_127023192_127025363_127025479_127025566
ENSMUSG00000019470.13_0	chr8	-	2669	19	FSM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	3671311	3660089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944_3669094_3671227
ENSMUSG00000019470.13_1	chr8	-	2585	18	ISM	ENSMUSG00000019470.13	ENSMUST00000019614.13	2677	19	2223	3	2223	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCCGGTCTTGACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	3669093	3660089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_3660220_3660310_3660421_3660544_3660675_3660846_3661019_3661113_3661237_3661393_3661585_3661671_3661835_3662962_3663077_3663158_3663291_3663367_3663500_3663589_3663710_3663798_3663951_3664244_3664390_3665993_3666159_3666249_3666385_3668054_3668253_3668542_3668667_3668944
ENSMUSG00000019471.11_0	chr9	-	7838	8	FSM	ENSMUSG00000019471.11	ENSMUST00000019615.11	7851	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTGGTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21061267	21044519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21051260_21052053_21052126_21052248_21052432_21053306_21053430_21053508_21053625_21053717_21053827_21054242_21054522_21061051
ENSMUSG00000019478.18_0	chr8	+	1406	8	FSM	ENSMUSG00000019478.18	ENSMUST00000118535.9	1419	8	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACAGTACACTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	124532733	124562023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124532906_124550552_124550634_124554062_124554178_124555734_124555798_124556971_124557127_124559541_124559638_124560753_124560887_124561432
ENSMUSG00000019487.12_0	chr17	+	1991	14	FSM	ENSMUSG00000019487.12	ENSMUST00000224947.2	2016	14	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTATATAAAGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57556466	57570414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569353_57569473_57569999
ENSMUSG00000019487.12_10	chr17	+	2120	15	FSM	ENSMUSG00000019487.12	ENSMUST00000224885.2	2136	15	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTATATAAAGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57556502	57570414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57563859_57564028_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ENSMUSG00000019487.12_14	chr17	+	2132	13	ISM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	1259	3	1193	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCCCGTGTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	57557740	57570662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ENSMUSG00000019487.12_16	chr17	+	2047	14	ISM	ENSMUSG00000019487.12	ENSMUST00000224885.2	2136	15	1244	15	1196	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTATATAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	57557743	57570412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57563859_57564028_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ENSMUSG00000019487.12_2	chr17	+	2216	14	FSM	ENSMUSG00000019487.12	ENSMUST00000019631.11	2224	14	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCCCGTGTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	57556486	57570662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57556572_57557741_57557858_57557954_57558012_57560261_57560410_57560496_57560560_57561056_57561162_57561259_57561389_57562017_57562165_57562272_57562468_57564234_57564345_57568289_57568423_57568639_57568789_57569356_57569473_57569999
ENSMUSG00000019494.15_0	chr5	+	1770	10	FSM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGAGAATGAGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	138159343	138162902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138159445_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_3	chr5	+	1086	10	FSM	ENSMUSG00000019494.15	ENSMUST00000110951.8	1098	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTAGCAGCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	138159367	138162234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138159453_138159636_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019494.15_5	chr5	+	1669	9	ISM	ENSMUSG00000019494.15	ENSMUST00000019638.15	1787	10	301	9	272	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGGGAGAATGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	138159633	138162899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_138159760_138159935_138160068_138160398_138160488_138160583_138160647_138160996_138161045_138161391_138161507_138161588_138161682_138161770_138161872_138161997
ENSMUSG00000019505.8_1	chr11	+	1482	2	FSM	ENSMUSG00000019505.8	ENSMUST00000019649.4	1499	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATATGGTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	62442006	62444032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62442422_62442965
ENSMUSG00000019518.12_0	chr5	+	3467	15	FSM	ENSMUSG00000019518.12	ENSMUST00000019662.11	3479	15	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTATGGTGGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	138170269	138178685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138170511_138170610_138170700_138171048_138171156_138171233_138171331_138173011_138173123_138173205_138173287_138174173_138174237_138174313_138174381_138174471_138174526_138174873_138174981_138175078_138175174_138175417_138175463_138176184_138176236_138176330_138176443_138176538
ENSMUSG00000019528.19_0	chr3	-	1865	7	FSM	ENSMUSG00000019528.19	ENSMUST00000118015.9	1922	7	48	9	48	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACATATCTTGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20209433	20176256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_20177029_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893_20207030_20209161
ENSMUSG00000019528.19_5	chr3	-	1230	7	FSM	ENSMUSG00000019528.19	ENST00000345003.9	1246	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTAGACTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20207022	20176663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_20177029_20177285_20177337_20179421_20179642_20192180_20192308_20204702_20204866_20205116_20205292_20206893
ENSMUSG00000019539.12_0	chr7	-	1451	7	FSM	ENSMUSG00000019539.12	ENSMUST00000019683.11	1462	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44741634	44732336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741519
ENSMUSG00000019539.12_1	chr7	-	1443	7	FSM	ENSMUSG00000019539.12	ENSMUST00000211352.2	1453	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTGTCTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44741635	44732336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44732788_44732989_44733190_44734327_44734389_44736088_44736262_44737921_44738125_44740864_44741113_44741528
ENSMUSG00000019558.15_0	chrX	+	3953	13	FSM	ENSMUSG00000019558.15	ENSMUST00000033752.14	3964	13	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCAAAATTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72716755	72726097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723678_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ENSMUSG00000019558.15_1	chrX	+	2507	14	FSM	ENSMUSG00000019558.15	ENSMUST00000114467.9	2509	14	0	2	0	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCCACCAATATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	72716847	72725244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72716873_72717358_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ENSMUSG00000019558.15_3	chrX	+	3302	13	FSM	ENSMUSG00000019558.15	ENSMUST00000114465.9	3314	13	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAATTGGCTCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	72717396	72726102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72717657_72719243_72719376_72720255_72720506_72720926_72721060_72722241_72722377_72722471_72722576_72722669_72722795_72723290_72723404_72723524_72723663_72723737_72723841_72723937_72724039_72724110_72724282_72724565
ENSMUSG00000019577.7_0	chr6	-	3467	11	FSM	ENSMUSG00000019577.7	ENSMUST00000019721.7	3484	11	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATAGTAATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	5496303	5483361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_5485593_5486677_5486792_5487063_5487175_5487378_5487478_5489134_5489212_5491069_5491148_5491590_5491678_5491829_5492015_5492705_5492778_5494889_5495032_5496032
ENSMUSG00000019578.12_3	chr17	-	2934	11	FSM	ENSMUSG00000019578.12	ENSMUST00000019722.12	2949	11	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACACCCGGCTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56382017	56374048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56375684_56375959_56376109_56376183_56376315_56376393_56376614_56376690_56376776_56377651_56377728_56377887_56377986_56379400_56379530_56379719_56379785_56380072_56380237_56381835
ENSMUSG00000019579.14_0	chr17	-	1684	6	FSM	ENSMUSG00000019579.14	ENSMUST00000019723.8	1710	6	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAAAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	56490911	56482760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56484004_56484698_56484772_56485263_56485346_56486363_56486426_56489664_56489716_56490738
ENSMUSG00000019590.17_0	chr11	-	2727	6	FSM	ENSMUSG00000019590.17	ENSMUST00000019734.11	2741	6	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGACCGCTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	105835233	105824536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_105826394_105826577_105826736_105827007_105827112_105827380_105827480_105828454_105828667_105834936
ENSMUSG00000019647.17_0	chr18	-	6838	19	FSM	ENSMUSG00000019647.17	ENSMUST00000019791.14	6856	19	12	6	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTATCTTTTGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47501885	47378326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_47382652_47403675_47403841_47409652_47409674_47412182_47412242_47414186_47414268_47414358_47414500_47414861_47415039_47416375_47416532_47420489_47420622_47423042_47423261_47424162_47424252_47424954_47425075_47427086_47427178_47431252_47431355_47432143_47432207_47433150_47433212_47437170_47437289_47439422_47439561_47501304
ENSMUSG00000019647.17_13	chr18	-	1452	2	FSM	ENSMUSG00000019647.17	ENST00000503865.1	1464	2	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGGGATACTCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	47383884	47381306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_47382652_47383777
ENSMUSG00000019659.9_0	chr9	+	825	7	FSM	ENSMUSG00000019659.9	ENSMUST00000019803.9	834	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTAGTTGCTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	110485579	110540674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110485727_110521383_110521452_110537513_110537594_110538961_110539024_110539194_110539230_110540153_110540231_110540318
ENSMUSG00000019689.5_0	chr6	+	463	2	FSM	ENSMUSG00000019689.5	ENSMUST00000019833.5	479	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTGGTGTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38511765	38516376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38511946_38516093
ENSMUSG00000019699.17_3	chr1	-	4612	12	ISM	ENSMUSG00000019699.17	ENSMUST00000111160.9	4735	13	117672	30	117672	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAATAAAGCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	176958661	176849710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536
ENSMUSG00000019699.17_4	chr1	-	4670	13	FSM	ENSMUSG00000019699.17	ENST00000672578.1	4682	13	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTTAAATAAAGCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	177085768	176849710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_176853016_176859215_176859319_176871340_176871429_176877603_176877819_176886899_176887029_176894776_176894900_176906339_176906409_176907766_176907833_176924532_176924665_176930527_176930673_176937192_176937305_176958536_176958663_177085711
ENSMUSG00000019710.14_0	chr3	+	1326	6	FSM	ENSMUSG00000019710.14	ENSMUST00000119968.8	1339	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAGAAACAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87826819	87830963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87827136_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_12	chr3	+	1200	5	FSM	ENSMUSG00000019710.14	ENSMUST00000121048.2	1234	5	22	12	22	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAACAGAAGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87828937	87830967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_3	chr3	+	1202	6	FSM	ENSMUSG00000019710.14	ENSMUST00000019854.13	1226	6	12	12	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAACAGAAGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87826824	87830967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87827013_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019710.14_8	chr3	+	1101	6	FSM	ENSMUSG00000019710.14	ENSMUST00000121920.8	1115	6	2	12	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGAAACAGAAGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	87826871	87830967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87826959_87829123_87829356_87829437_87829534_87829694_87829799_87830241_87830373_87830516
ENSMUSG00000019715.15_0	chr2	+	4009	16	FSM	ENSMUSG00000019715.15	ENSMUST00000019859.9	4030	16	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTGAGCGTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	29825449	29850374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29825611_29826021_29826250_29828506_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29842566_29842672_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019715.15_5	chr2	+	1757	13	FSM	ENSMUSG00000019715.15	ENST00000684314.1	1770	13	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATCTGTACCCCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	29828520	29848630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29828618_29829146_29829296_29829494_29829556_29830093_29830349_29832549_29832779_29833736_29833850_29834000_29834071_29838901_29839045_29839167_29839359_29840613_29840744_29845617_29845701_29847761_29847826_29848458
ENSMUSG00000019718.9_0	chr12	-	1811	5	FSM	ENSMUSG00000019718.9	ENSMUST00000019862.3	1831	5	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGATCAAAAGGAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	72132197	72120205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_72120811_72123917_72124056_72124137_72124261_72126260_72126431_72131422
ENSMUSG00000019731.14_0	chr8	-	4373	6	FSM	ENSMUSG00000019731.14	ENSMUST00000152080.8	4383	6	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGTTGGAGTTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	73246451	73234487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73237838_73238504_73238751_73241964_73242091_73243295_73243434_73245685_73245757_73246009
ENSMUSG00000019732.15_0	chr8	-	1356	7	FSM	ENSMUSG00000019732.15	ENSMUST00000109974.2	1371	7	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATGATAAAATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	73188995	73178036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73178600_73179610_73179704_73181005_73181138_73181913_73182010_73185216_73185406_73188633_73188729_73188807
ENSMUSG00000019738.16_0	chr7	+	803	6	FSM	ENSMUSG00000019738.16	ENSMUST00000019882.16	819	6	10	6	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTAGTGTTTCCCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29931382	29932809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29931830_29931906_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019738.16_1	chr7	+	493	5	FSM	ENSMUSG00000019738.16	ENSMUST00000108192.2	508	5	13	2	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTAGTGTTTCCCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29931769	29932809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29931962_29932174_29932249_29932331_29932407_29932491_29932544_29932709
ENSMUSG00000019761.11_0	chr11	-	2077	8	FSM	ENSMUSG00000019761.11	ENSMUST00000103131.5	2094	8	5	12	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATAAAAATCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	99280185	99276091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99276463_99276756_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019761.11_1	chr11	-	2083	8	FSM	ENSMUSG00000019761.11	ENST00000635956.2	2105	8	12	10	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCAAACTATAAAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	99280175	99276095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99276463_99276736_99277096_99277356_99277575_99277823_99277950_99278055_99278218_99278323_99278481_99278835_99278919_99279564
ENSMUSG00000019762.5_0	chr10	+	1059	5	FSM	ENSMUSG00000019762.5	ENST00000229447.9	1077	5	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCCAGCCAACCTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	3490174	3504208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3490462_3495509_3495702_3497004_3497165_3501873_3502031_3503945
ENSMUSG00000019763.12_0	chr10	-	3129	13	FSM	ENSMUSG00000019763.12	ENSMUST00000042251.11	3139	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4382378	4351914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_4353502_4353873_4353991_4357804_4357926_4360712_4360790_4361666_4361732_4363308_4363416_4364542_4364644_4367152_4367193_4368555_4368632_4372081_4372191_4377170_4377692_4379076_4379172_4382265
ENSMUSG00000019768.17_0	chr10	+	6297	10	FSM	ENSMUSG00000019768.17	ENSMUST00000105590.8	6339	10	19	23	-13	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAATAAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	4562007	4955591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4562156_4619222_4619333_4662312_4662848_4696616_4696808_4733856_4733974_4806857_4807194_4889211_4889351_4919158_4919293_4947829_4948014_4951188
ENSMUSG00000019773.8_0	chr10	-	1925	5	FSM	ENSMUSG00000019773.8	ENSMUST00000019907.8	1940	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTAATGATGTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5755591	5749165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5749823_5750255_5750436_5751151_5751243_5751868_5752533_5755258
ENSMUSG00000019774.9_1	chr10	-	2575	7	FSM	ENSMUSG00000019774.9	ENSMUST00000019908.9	2588	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCTACAAAATTAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	5773903	5761892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5763407_5764040_5764178_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUSG00000019774.9_2	chr10	-	875	6	FSM	ENSMUSG00000019774.9	ENST00000367231.9	898	6	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCAGAAGAGACTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	5773671	5763223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5763407_5765551_5765670_5767448_5767613_5768800_5768985_5770024_5770105_5773525
ENSMUSG00000019775.18_0	chr10	-	8082	5	FSM	ENSMUSG00000019775.18	ENSMUST00000131996.8	8107	5	22	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCTGGTGTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5872364	5775665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5783142_5791271_5791507_5792535_5792626_5812518_5812663_5872227
ENSMUSG00000019775.18_1	chr10	-	8176	6	FSM	ENSMUSG00000019775.18	ENSMUST00000064225.14	8191	6	12	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCTGGTGTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5872388	5775665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5783142_5791271_5791507_5792535_5792626_5812518_5812663_5868183_5868254_5872227
ENSMUSG00000019777.17_0	chr10	+	1989	14	FSM	ENSMUSG00000019777.17	ENSMUST00000019911.14	2005	14	9	7	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGATCGTTTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36850548	36877878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_36850800_36861122_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUSG00000019777.17_12	chr10	+	1880	14	FSM	ENSMUSG00000019777.17	ENST00000368632.6	1898	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGATCGTTTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36850674	36877878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_36850800_36861105_36861236_36862302_36862421_36864075_36864151_36865145_36865285_36867752_36867895_36869603_36869697_36869771_36869881_36872984_36873126_36873389_36873499_36873962_36874094_36874409_36874566_36876364_36876423_36877524
ENSMUSG00000019779.16_0	chr10	+	4685	9	FSM	ENSMUSG00000019779.16	ENSMUST00000019913.15	4696	9	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCACTGTGTTTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	34359400	34487269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_34359585_34359740_34360366_34423288_34423411_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481873_34483801_34483968_34484355
ENSMUSG00000019779.16_2	chr10	+	3386	8	FSM	ENSMUSG00000019779.16	ENSMUST00000170771.3	3406	8	0	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34359515	34485929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_34360366_34423288_34423411_34459893_34460058_34462161_34462331_34467807_34467967_34481690_34481873_34483801_34483968_34484355
ENSMUSG00000019782.11_0	chr10	-	1218	8	FSM	ENSMUSG00000019782.11	ENST00000487832.6	1236	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAATGTCTTACGAGA	NA	NA	NA	NA	NA	NA	NA	NA	33895479	33872379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33893190_33893289_33895361
ENSMUSG00000019782.11_10	chr10	-	1069	7	FSM	ENSMUSG00000019782.11	ENSMUST00000019917.6	1090	7	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAAATATAAAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33895610	33872561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33872845_33877132_33877196_33877653_33877787_33878419_33878564_33884988_33885120_33888067_33888134_33895361
ENSMUSG00000019787.10_0	chr10	+	4505	38	FSM	ENSMUSG00000019787.10	ENSMUST00000095762.5	4514	38	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTTTCGTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	32959480	33352698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_32959742_33015069_33015280_33033008_33033171_33034241_33034275_33051764_33051825_33059949_33060013_33062636_33062697_33071944_33072122_33076158_33076219_33109850_33109923_33133070_33133134_33134082_33134137_33181032_33181087_33197300_33197331_33208431_33208462_33209227_33209246_33210977_33211011_33211135_33211163_33213508_33213536_33219071_33219120_33239973_33240019_33274376_33274428_33275090_33275142_33309696_33309727_33313713_33313744_33314787_33314815_33315170_33315219_33318883_33318929_33320049_33320071_33320719_33320747_33321415_33321455_33322983_33323029_33326974_33326999_33340553_33340593_33342418_33342458_33344151_33344191_33347561_33347601_33350374
ENSMUSG00000019790.18_0	chr10	-	8791	28	FSM	ENSMUSG00000019790.18	ENSMUST00000038213.14	8825	28	30	4	30	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAAGAAGCCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	9776397	9631294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_9636699_9638488_9638710_9642901_9643014_9644573_9644740_9645084_9645455_9646193_9646434_9653764_9653816_9659931_9659980_9660084_9660145_9665106_9665173_9673865_9674018_9675686_9675813_9684163_9684343_9684772_9684994_9687411_9687453_9687708_9687777_9688003_9688152_9691994_9692068_9693049_9693205_9701113_9701193_9711577_9711702_9713820_9713905_9717614_9717679_9718970_9719106_9740756_9740858_9742356_9742439_9774900_9774999_9776274
ENSMUSG00000019791.13_0	chr10	-	852	5	FSM	ENSMUSG00000019791.13	ENSMUST00000161074.8	875	5	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACACTGTAGTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30494460	30484144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30484420_30486312_30486440_30487643_30487714_30490708_30490827_30494198
ENSMUSG00000019792.9_0	chr10	-	2345	13	FSM	ENSMUSG00000019792.9	ENSMUST00000019927.7	2359	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCGCCTATTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	30476735	30410224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30411241_30423652_30423774_30434914_30435047_30435159_30435233_30436813_30436979_30442421_30442503_30463434_30463592_30466020_30466156_30466838_30466932_30467016_30467099_30470110_30470185_30473735_30473802_30476585
ENSMUSG00000019794.14_0	chr10	+	1756	11	FSM	ENSMUSG00000019794.14	ENSMUST00000019929.13	1774	11	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTCTTTGTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	7601774	7638906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7601888_7614486_7614662_7617171_7617330_7619319_7619501_7624539_7624662_7627307_7627414_7628507_7628667_7635460_7635588_7636498_7636634_7637006_7637134_7638553
ENSMUSG00000019795.18_0	chr10	-	2740	8	FSM	ENSMUSG00000019795.18	ENSMUST00000162606.8	2757	8	9	8	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACCAGTCTGGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7539363	7505144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7506741_7513819_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019795.18_1	chr10	-	2473	8	FSM	ENSMUSG00000019795.18	ENSMUST00000159917.8	2491	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTACCCACCAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7539055	7505150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7506741_7513772_7513990_7515808_7515895_7516458_7516580_7520088_7520194_7523353_7523386_7524814_7524920_7538838
ENSMUSG00000019796.13_0	chr10	+	3365	7	FSM	ENSMUSG00000019796.13	ENSMUST00000019931.12	3386	7	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATTCTTTCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	7465593	7501239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7466378_7471867_7472029_7474470_7474613_7478592_7478719_7479937_7480148_7484307_7484404_7499393
ENSMUSG00000019797.12_0	chr10	-	855	4	FSM	ENSMUSG00000019797.12	ENSMUST00000147196.3	860	4	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGGGTCACCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	43416964	43401133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43401405_43406593_43406667_43408671_43409154_43416935
ENSMUSG00000019797.12_1	chr10	-	818	3	ISM	ENSMUSG00000019797.12	ENST00000405204.6	1086	4	7546	-5	7546	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGGGGTCACCGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	43409145	43401133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_43401405_43406593_43406667_43408671
ENSMUSG00000019797.12_2	chr10	-	1074	4	FSM	ENSMUSG00000019797.12	ENST00000405204.6	1086	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTCATTTATGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	43416683	43401142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43401405_43406593_43406667_43408671_43409143_43416415
ENSMUSG00000019802.14_0	chr10	+	6010	21	FSM	ENSMUSG00000019802.14	ENSMUST00000019937.5	6032	21	18	4	18	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTTTCCCTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	42637509	42708506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_42637885_42659437_42659538_42665295_42665411_42667174_42667288_42670770_42670833_42672201_42672261_42673678_42673730_42674742_42674852_42677628_42677724_42677817_42677951_42679885_42679979_42681071_42681227_42682519_42682668_42686838_42686922_42688431_42688492_42688660_42688835_42691050_42691210_42692363_42692466_42699876_42699976_42703872_42703978_42704886
ENSMUSG00000019804.13_0	chr10	+	1381	4	FSM	ENSMUSG00000019804.13	ENSMUST00000019939.12	1401	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCATTCCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	42378039	42411359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_42378489_42401949_42402046_42409144_42409270_42410648
ENSMUSG00000019806.14_0	chr10	-	1533	6	FSM	ENSMUSG00000019806.14	ENSMUST00000162610.8	1554	6	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATCCAAACCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	13744715	13522809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13523451_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUSG00000019806.14_2	chr10	-	1438	6	FSM	ENSMUSG00000019806.14	ENSMUST00000019942.6	1439	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTCTTCAGAGAATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	13744701	13528195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13528756_13529329_13529494_13566267_13566384_13677591_13677694_13704986_13705143_13744361
ENSMUSG00000019808.9_0	chr10	+	1453	6	FSM	ENSMUSG00000019808.9	ENSMUST00000019944.9	1466	6	5	8	5	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGGAGGAACCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13428642	13439112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13429106_13432595_13432701_13435857_13436009_13437447_13437555_13438380_13438454_13438558
ENSMUSG00000019809.17_0	chr10	-	1333	12	FSM	ENSMUSG00000019809.17	ENSMUST00000170376.8	1381	12	43	5	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATAGTTTATGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13428843	13399590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13399688_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUSG00000019809.17_1	chr10	-	2114	12	FSM	ENSMUSG00000019809.17	ENSMUST00000019945.15	2129	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGCTTTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	13428874	13399865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428569
ENSMUSG00000019809.17_2	chr10	-	1947	12	FSM	ENSMUSG00000019809.17	ENSMUST00000105539.2	1961	12	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACTATTTTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13428863	13399898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13400713_13403484_13403582_13407001_13407125_13408083_13408155_13410415_13410582_13411298_13411354_13411452_13411520_13411686_13411812_13413174_13413219_13418367_13418450_13422093_13422226_13428692
ENSMUSG00000019810.16_0	chr10	+	1980	8	FSM	ENSMUSG00000019810.16	ENSMUST00000060212.13	2007	8	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAAAGACTTCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	13376766	13391282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450_13390619_13390860
ENSMUSG00000019810.16_1	chr10	+	5720	7	FSM	ENSMUSG00000019810.16	ENSMUST00000121465.3	5741	7	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAACGCACTAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	13376757	13394771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13377118_13378814_13379003_13381482_13381823_13382449_13382661_13382978_13383170_13388361_13388471_13390450
ENSMUSG00000019813.17_17	chr10	-	1365	9	FSM	ENSMUSG00000019813.17	ENST00000359793.7	1380	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACCGCACGCCGTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	41621910	41595650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41595904_41597552_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_2	chr10	-	2052	9	FSM	ENSMUSG00000019813.17	ENSMUST00000105505.10	2071	9	14	5	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	41621913	41594840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_27	chr10	-	1115	8	ISM	ENSMUSG00000019813.17	ENST00000359793.7	1380	9	8	1906	8	-7	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGACACTCCCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	41621911	41597550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_28	chr10	-	1174	9	FSM	ENSMUSG00000019813.17	ENST00000368968.6	1181	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGACACTCCCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	41685621	41597550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41597698_41598879_41599119_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUSG00000019813.17_3	chr10	-	2224	11	FSM	ENSMUSG00000019813.17	ENSMUST00000189770.7	2232	11	4	4	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCTGTGGAAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	41685860	41594840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568_41685660_41685783
ENSMUSG00000019813.17_37	chr10	-	784	6	FSM	ENSMUSG00000019813.17	ENST00000521277.5	795	6	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGCAGCATCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41685711	41605328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41605405_41606994_41607112_41616835_41616910_41619037_41619218_41621766_41621961_41685568
ENSMUSG00000019813.17_5	chr10	-	2133	10	ISM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	63695	0	11	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	41621908	41594841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766
ENSMUSG00000019813.17_9	chr10	-	2177	11	FSM	ENSMUSG00000019813.17	ENSMUST00000019951.16	2177	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGCCTGTGGAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	41685603	41594841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41595904_41597552_41597698_41598879_41599002_41599856_41599935_41604623_41604711_41605326_41605405_41606994_41607112_41616835_41616958_41619037_41619218_41621766_41621918_41685568
ENSMUSG00000019814.6_0	chr10	-	2280	11	FSM	ENSMUSG00000019814.6	ENSMUST00000019950.6	2297	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGAGTTTCTAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13068904	13053892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13054741_13054866_13055068_13055398_13055452_13055738_13055879_13056633_13056762_13058022_13058273_13058604_13058741_13061167_13061256_13066318_13066490_13067851_13067984_13068771
ENSMUSG00000019818.16_0	chr10	+	2905	6	FSM	ENSMUSG00000019818.16	ENSMUST00000019962.15	2922	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTGTCATATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	41395419	41407037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41395697_41397913_41398004_41399168_41399241_41400102_41400142_41402822_41402880_41404667
ENSMUSG00000019820.12_0	chr10	-	12367	74	FSM	ENSMUSG00000019820.12	ENSMUST00000076817.5	12382	74	4	11	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAAATGACTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	12737475	12257942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311
ENSMUSG00000019820.12_3	chr10	-	11782	75	FSM	ENSMUSG00000019820.12	ENSMUST00000218635.2	11801	75	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGTCTCAAAAAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	12745097	12259130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_12259941_12261261_12261285_12277054_12277148_12278626_12278736_12281597_12281839_12282179_12282339_12289679_12289746_12290924_12290991_12291194_12291234_12297340_12297478_12312024_12312137_12315370_12315538_12317679_12317838_12323750_12323837_12331106_12331309_12339029_12339105_12340924_12340987_12351014_12351076_12354156_12354236_12356967_12357115_12362129_12362399_12377121_12377252_12401081_12401239_12413784_12413958_12496934_12497125_12509687_12509843_12512339_12512546_12516670_12516789_12519146_12519356_12524886_12524963_12528454_12528605_12530442_12530579_12534239_12534416_12536522_12536674_12539109_12539283_12540690_12540883_12542442_12542581_12543243_12543403_12545399_12545571_12545863_12545993_12547494_12547675_12554323_12554495_12556215_12556372_12558020_12558195_12558988_12559118_12560153_12560316_12562075_12562226_12564036_12564172_12566473_12566654_12569107_12569279_12573732_12573889_12574745_12574860_12585709_12585923_12587181_12587328_12588997_12589179_12589876_12590119_12595761_12595850_12596562_12596687_12601954_12602125_12603476_12603657_12604454_12604563_12609642_12609745_12610841_12610962_12612695_12612847_12613828_12614011_12615110_12615315_12619788_12619950_12620975_12621092_12623658_12623832_12625774_12625868_12626208_12626287_12627238_12627332_12641014_12641077_12737311_12737480_12744498
ENSMUSG00000019822.13_0	chr10	-	1581	10	FSM	ENSMUSG00000019822.13	ENSMUST00000019965.13	1602	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCTAGTGGCTCTACCT	NA	NA	NA	NA	NA	NA	NA	NA	41366323	41363175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41363579_41363667_41363822_41363988_41364094_41364172_41364306_41364428_41364512_41364729_41364820_41364926_41365021_41365270_41365348_41365459_41365557_41365978
ENSMUSG00000019823.18_0	chr10	+	3549	24	FSM	ENSMUSG00000019823.18	ENSMUST00000019967.16	3563	24	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGAACAGGGTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	41352315	41363018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41352537_41354005_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359799_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019823.18_19	chr10	+	2971	22	FSM	ENSMUSG00000019823.18	ENST00000358577.7	2984	22	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGATGGTTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	41354029	41362900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019823.18_33	chr10	+	3227	23	FSM	ENSMUSG00000019823.18	ENST00000358807.8	3242	23	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGATGGTTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	41354031	41362900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41354311_41354423_41354632_41354958_41355064_41355390_41355496_41355614_41355771_41356280_41356382_41357129_41357388_41357585_41357702_41357896_41358024_41358203_41358286_41358599_41358745_41359436_41359628_41359712_41359842_41360160_41360251_41360371_41360529_41360728_41360806_41360980_41361252_41361390_41361492_41361761_41361876_41362023_41362118_41362367_41362468_41362589_41362664_41362753
ENSMUSG00000019826.12_0	chr10	+	2838	7	FSM	ENSMUSG00000019826.12	ENSMUST00000080771.10	2844	7	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTGATACTTGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	41326381	41341567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41326527_41327084_41328065_41331023_41331192_41331668_41331753_41332527_41332612_41338274_41338357_41340272
ENSMUSG00000019826.12_4	chr10	+	2457	2	FSM	ENSMUSG00000019826.12	ENSMUST00000216656.2	2476	2	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAGGGAAACATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	41326438	41329453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41326527_41327084
ENSMUSG00000019828.14_0	chr10	-	3674	9	FSM	ENSMUSG00000019828.14	ENST00000507907.1	3690	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGGAGTATGCGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10956305	10564705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_10565612_10573791_10573877_10594966_10595898_10608902_10609030_10617179_10617349_10622288_10622536_10658302_10658539_10812072_10812323_10955582
ENSMUSG00000019831.15_0	chr10	+	3087	11	FSM	ENSMUSG00000019831.15	ENST00000392588.5	3106	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAAGGCTCTTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	40759524	40814553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_40760067_40760733_40760872_40796243_40796405_40802479_40802615_40806626_40806781_40807911_40808030_40809108_40809282_40810472_40810653_40812105_40812735_40813641_40813810_40813864
ENSMUSG00000019832.6_0	chr10	-	2134	3	FSM	ENSMUSG00000019832.6	ENSMUST00000019974.5	2149	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGATTTGTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	10434000	10420751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_10422196_10426422_10426701_10433588
ENSMUSG00000019837.9_0	chr10	-	2508	6	FSM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGAGATAATAGTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	40133655	40123704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133574
ENSMUSG00000019837.9_1	chr10	-	2429	5	ISM	ENSMUSG00000019837.9	ENSMUST00000217537.2	2526	6	378	4	378	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGATAATAGTTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	40133289	40123702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208
ENSMUSG00000019837.9_4	chr10	-	885	6	FSM	ENSMUSG00000019837.9	ENSMUST00000019982.9	887	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACCTGGATTCGATTT	NA	NA	NA	NA	NA	NA	NA	NA	40133670	40125345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40125828_40127151_40127266_40130259_40130305_40130396_40130461_40133208_40133290_40133571
ENSMUSG00000019838.12_0	chr10	-	5382	6	FSM	ENSMUSG00000019838.12	ENSMUST00000092566.8	5397	6	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTTGTGATTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40018237	39909529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_39913401_39916594_39916824_39932482_39932627_39952559_39953014_39956658_39956804_40017698
ENSMUSG00000019841.16_0	chr10	+	10684	32	FSM	ENSMUSG00000019841.16	ENSMUST00000019986.13	10713	32	14	15	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATGAAATACAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	39608127	39751192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ENSMUSG00000019841.16_2	chr10	+	10385	33	FSM	ENSMUSG00000019841.16	ENSMUST00000164763.8	10399	33	0	14	0	-14	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATATGAAATACAGT	NA	NA	NA	NA	NA	NA	NA	NA	39608359	39751188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39608397_39608459_39608610_39659138_39659329_39666764_39666840_39670859_39671021_39675876_39675974_39680947_39681043_39681595_39681701_39682657_39682743_39682830_39682980_39689966_39690087_39693137_39693376_39696443_39696587_39697101_39701255_39703705_39704602_39706894_39706978_39708513_39708640_39711155_39711349_39712621_39712734_39714437_39714554_39716880_39717000_39719406_39719526_39722137_39722280_39722664_39722910_39723970_39724080_39727862_39728070_39730694_39730805_39735102_39735218_39738689_39738828_39739733_39739925_39740589_39740837_39743288_39743499_39750079
ENSMUSG00000019842.7_1	chr10	+	1670	8	FSM	ENSMUSG00000019842.7	ENST00000359831.8	1682	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGGCCACTCCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	39501853	39530524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522847_39522962_39526901_39526977_39530378
ENSMUSG00000019842.7_3	chr10	+	1671	8	FSM	ENSMUSG00000019842.7	ENST00000392556.8	1685	8	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATGGCCACTCCAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	39501855	39530524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39502656_39510530_39510727_39515215_39515395_39517301_39517391_39521703_39521773_39522844_39522962_39526901_39526977_39530378
ENSMUSG00000019843.15_0	chr10	+	3534	14	FSM	ENSMUSG00000019843.15	ENSMUST00000063091.13	3562	14	12	16	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTTGAAAAAAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	39245771	39441361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405914_39406071_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUSG00000019843.15_1	chr10	+	3521	14	FSM	ENSMUSG00000019843.15	ENSMUST00000099967.10	3528	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTTGAAAAAAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	39245793	39441361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39246187_39271000_39271041_39331061_39331132_39387734_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39405432_39405598_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUSG00000019843.15_2	chr10	+	1865	10	FSM	ENSMUSG00000019843.15	ENSMUST00000136659.2	1910	10	31	14	31	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTTAACAAAAAATGATC	NA	NA	NA	NA	NA	NA	NA	NA	39387765	39440404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39387993_39391568_39391666_39398749_39398849_39401396_39401501_39402776_39402927_39408011_39408192_39409629_39409707_39409804_39409959_39427382_39427515_39439759
ENSMUSG00000019845.9_0	chr10	+	2921	12	FSM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCACTATCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	39010019	39027047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_39010104_39010201_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUSG00000019845.9_2	chr10	+	2838	11	ISM	ENSMUSG00000019845.9	ENSMUST00000019991.8	2929	12	182	7	182	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCACTATCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	39010200	39027047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_39010276_39010983_39011037_39013129_39013188_39016818_39016935_39018250_39018373_39020370_39020559_39020751_39020928_39021568_39021710_39023307_39023449_39023758_39023934_39025454
ENSMUSG00000019846.12_0	chr10	+	5863	39	FSM	ENSMUSG00000019846.12	ENST00000522006.5	5876	39	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGCTGCAAGGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	38841400	38986028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_38841729_38841865_38842146_38881407_38881510_38886993_38887119_38893316_38893398_38902530_38902746_38904617_38904693_38906428_38906581_38909006_38909118_38918576_38918689_38921648_38921817_38923929_38924124_38929736_38929854_38932772_38932922_38936122_38936265_38937349_38937447_38941599_38941717_38943850_38944031_38945950_38946091_38948710_38948891_38949560_38949707_38950120_38950284_38950659_38950794_38951351_38951524_38954715_38954848_38956477_38956621_38958723_38958863_38959264_38959403_38963248_38963383_38964282_38964448_38964754_38964903_38968125_38968314_38970890_38971081_38973078_38973235_38974322_38974483_38979483_38979615_38981132_38981227_38981957_38982078_38985883
ENSMUSG00000019848.15_0	chr10	+	1833	4	FSM	ENSMUSG00000019848.15	ENSMUST00000019994.14	1853	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCCAATTTGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	45165410	45194538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45165672_45190656_45191376_45192526_45192636_45193794
ENSMUSG00000019848.15_8	chr10	+	1355	4	FSM	ENSMUSG00000019848.15	ENSMUST00000161803.2	1369	4	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAATTTTCACGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	45165501	45194203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45165672_45190656_45191376_45192578_45192636_45193794
ENSMUSG00000019849.12_0	chr10	+	10914	15	FSM	ENSMUSG00000019849.12	ENSMUST00000099858.4	10933	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3960	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTGTTTTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44943310	45043287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_44943472_44948148_44948224_44967088_44967223_44968757_44968889_44971076_44971287_44973488_44973611_44983867_44983974_44991158_44991351_44996738_44996937_45002059_45002164_45024080_45024218_45026531_45026627_45029150_45029283_45031611_45031769_45034327
ENSMUSG00000019850.12_0	chr10	-	4404	9	FSM	ENSMUSG00000019850.12	ENSMUST00000019997.11	4422	9	5	13	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAGAACAAATTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	18891153	18876670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_18878764_18879323_18879506_18880204_18881080_18881298_18881480_18882610_18882782_18882929_18883078_18883892_18884084_18887228_18887539_18890900
ENSMUSG00000019851.9_0	chr10	+	1932	3	FSM	ENSMUSG00000019851.9	ENSMUST00000019998.9	1952	3	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCTGTGTCTGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18720784	18732818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_18721155_18729284_18729426_18731397
ENSMUSG00000019853.7_0	chr10	-	2528	4	FSM	ENSMUSG00000019853.7	ENSMUST00000020000.7	2535	4	7	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGTTCTTGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	18421817	18415245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_18417081_18420012_18420194_18420825_18420962_18421441
ENSMUSG00000019853.7_2	chr10	-	930	4	FSM	ENSMUSG00000019853.7	ENSMUST00000213153.2	968	4	28	10	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGATAACTTTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	18421607	18416515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_18417081_18420130_18420194_18420825_18420962_18421441
ENSMUSG00000019854.18_0	chr10	+	2589	20	FSM	ENSMUSG00000019854.18	ENSMUST00000126390.8	2595	20	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGACTTTCTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	17931687	18000874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17983415_17983497_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ENSMUSG00000019854.18_1	chr10	+	2517	19	FSM	ENSMUSG00000019854.18	ENSMUST00000164556.8	2537	19	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTATTTGTTGGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	17931700	18000896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_17931864_17965195_17965320_17968592_17968790_17968917_17969072_17969526_17969652_17970157_17970321_17970592_17970657_17971929_17972085_17979901_17980024_17990146_17990235_17991463_17991566_17993412_17993483_17994674_17994794_17995912_17995978_17996780_17996967_17998182_17998279_17998772_17998922_17999346_17999453_18000627
ENSMUSG00000019856.15_0	chr10	-	3221	16	FSM	ENSMUSG00000019856.15	ENST00000521531.5	3232	16	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGACTGAATTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	53627024	53509736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_53509812_53511327_53511531_53517040_53517159_53523667_53523853_53525197_53525326_53528395_53528550_53531062_53531276_53550661_53550813_53551231_53551354_53553826_53553989_53560331_53560455_53566046_53566245_53570790_53570973_53573219_53573356_53574584_53575440_53626808
ENSMUSG00000019857.8_0	chr10	+	2172	4	FSM	ENSMUSG00000019857.8	ENSMUST00000020004.8	2201	4	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACGATTTGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53473056	53485301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_53473395_53478443_53478560_53482204_53482382_53483760
ENSMUSG00000019861.16_0	chr10	-	4202	8	FSM	ENSMUSG00000019861.16	ENSMUST00000020008.10	4216	8	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACATTAAATATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	52258169	52213159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_52215950_52222144_52222326_52225167_52225333_52226696_52226793_52229422_52229589_52230667_52230844_52234868_52235034_52257706
ENSMUSG00000019863.8_0	chr10	-	1957	11	FSM	ENSMUSG00000019863.8	ENSMUST00000020012.7	1981	11	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCTAAGTACTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	43777727	43750193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764964_43765133_43770510_43770608_43771429_43771529_43772004_43772165_43777609
ENSMUSG00000019863.8_4	chr10	-	1456	10	FSM	ENSMUSG00000019863.8	ENST00000400977.3	1474	10	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATGGCTCGTTGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43772151	43750540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43750703_43752467_43752674_43757468_43757587_43758061_43758255_43760744_43760858_43760938_43761115_43764987_43765133_43770510_43770608_43771429_43771529_43772004
ENSMUSG00000019864.15_0	chr10	+	2967	9	FSM	ENSMUSG00000019864.15	ENSMUST00000054418.12	2981	9	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGTTTTTGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	43777816	43823858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43778533_43783754_43783907_43785902_43785972_43786788_43786914_43797382_43797432_43804318_43804456_43808358_43808543_43811994_43812088_43822416
ENSMUSG00000019866.16_0	chr10	-	7511	22	FSM	ENSMUSG00000019866.16	ENSMUST00000200401.2	7525	22	9	5	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACATGATGAAATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	44024840	43826636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43827954_43832644_43832808_43834243_43834403_43834809_43834934_43837424_43837565_43840573_43840704_43842296_43842410_43843460_43843494_43843684_43843812_43849653_43849800_43849889_43850017_43851022_43851181_43852793_43852830_43855476_43855604_43862246_43862387_43865089_43865250_43868450_43868570_43868653_43868702_43873047_43875344_43879423_43880887_43941720_43941854_44024588
ENSMUSG00000019866.16_1	chr10	-	6594	20	FSM	ENSMUSG00000019866.16	ENSMUST00000020017.14	6608	20	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACATGATGAAATCGTG	NA	NA	NA	NA	NA	NA	NA	NA	43880354	43826636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_43827954_43832644_43832808_43834243_43834403_43834809_43834934_43837424_43837565_43840573_43840704_43842296_43842410_43843460_43843494_43843684_43843812_43849653_43849800_43849889_43850017_43851022_43851181_43852793_43852830_43855476_43855604_43862246_43862387_43865089_43865250_43868450_43868570_43868653_43868702_43873047_43875344_43879423
ENSMUSG00000019868.17_0	chr10	-	1956	8	FSM	ENSMUSG00000019868.17	ENSMUST00000154132.8	1974	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCATCTGGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	14581293	14530505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_14531590_14536809_14536897_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357_14563453_14581093
ENSMUSG00000019868.17_3	chr10	-	1080	6	FSM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAATAGTCCGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	14563446	14531088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624_14560753_14563357
ENSMUSG00000019868.17_4	chr10	-	991	5	ISM	ENSMUSG00000019868.17	ENST00000620996.4	1095	6	2700	9	2700	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGAATAGTCCGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	14560752	14531088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_14531590_14543675_14543853_14551677_14551787_14559807_14559884_14560624
ENSMUSG00000019872.14_0	chr10	+	1948	8	FSM	ENSMUSG00000019872.14	ENSMUST00000020022.8	1961	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTTCTGTTTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	57670477	57687921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_57670881_57677006_57677221_57678515_57678661_57681662_57681760_57683450_57683621_57683972_57684154_57685141_57685267_57687308
ENSMUSG00000019873.9_0	chr10	-	5409	8	FSM	ENSMUSG00000019873.9	ENSMUST00000020023.9	5430	8	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCAGCTGAGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66932710	66844974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_66849566_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ENSMUSG00000019873.9_7	chr10	-	2920	9	FSM	ENSMUSG00000019873.9	ENSMUST00000217841.2	2925	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGATAAGGTGATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66932625	66847455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_66849566_66849866_66849944_66850680_66850827_66857527_66857673_66870377_66870492_66871663_66871785_66875279_66875357_66898777_66898851_66932568
ENSMUSG00000019877.11_0	chr10	-	2858	9	FSM	ENSMUSG00000019877.11	ENSMUST00000020027.11	2880	9	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2400	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAGAAAACGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57408616	57391881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_57393389_57395458_57395690_57395793_57395939_57399051_57399313_57400056_57400195_57400415_57400496_57401420_57401591_57403760_57403923_57408452
ENSMUSG00000019878.9_1	chr10	+	2573	12	FSM	ENSMUSG00000019878.9	ENSMUST00000079833.6	2604	12	15	16	-14	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAACCAAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57362506	57389215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_57362698_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57387539_57387625_57387998
ENSMUSG00000019878.9_3	chr10	+	2419	14	FSM	ENSMUSG00000019878.9	ENSMUST00000220042.2	2430	14	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGAGTACTATTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57362526	57388955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_57362698_57366953_57367026_57371993_57372103_57372250_57372379_57373592_57373718_57375511_57375588_57377465_57377528_57378718_57378807_57380677_57380827_57381241_57381479_57382292_57382399_57385156_57385211_57387539_57387625_57387998
ENSMUSG00000019883.12_1	chr10	+	3837	6	FSM	ENSMUSG00000019883.12	ENSMUST00000020034.6	3856	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTAACATTTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29189507	29223458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_29189730_29193502_29193719_29198270_29198414_29207814_29207868_29210186_29210268_29220336
ENSMUSG00000019883.12_7	chr10	+	648	4	FSM	ENSMUSG00000019883.12	ENST00000454591.6	672	4	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGGAAAGCATACTAA	NA	NA	NA	NA	NA	NA	NA	NA	29198282	29220721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_29198414_29207816_29207868_29210186_29210268_29220336
ENSMUSG00000019889.11_0	chr10	+	6161	32	FSM	ENSMUSG00000019889.11	ENSMUST00000166468.2	6177	32	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTCAATATGAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	27950824	28473386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28438102_28438139_28442490_28442676_28444322_28444411_28445892_28445970_28446169_28446188_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ENSMUSG00000019889.11_12	chr10	+	4532	29	FSM	ENSMUSG00000019889.11	ENST00000368215.7	4547	29	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACACATTGCATGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	28082136	28472170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427616_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ENSMUSG00000019889.11_4	chr10	+	4642	31	FSM	ENSMUSG00000019889.11	ENSMUST00000218359.2	4669	31	26	1	26	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCTTTTACATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	27950875	28471954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_27951174_28082129_28082253_28139496_28139769_28210471_28210554_28212417_28212534_28230600_28230776_28259426_28259721_28341753_28342057_28348943_28349054_28351080_28351283_28359183_28359290_28368909_28369184_28372904_28372942_28427613_28427753_28436000_28436162_28442490_28442676_28444322_28444411_28445892_28445970_28446169_28446188_28449363_28449401_28450814_28450913_28451585_28451703_28456388_28456544_28461555_28461692_28461918_28462069_28462903_28463078_28464923_28465056_28465254_28465381_28467880_28468045_28468765_28468902_28471797
ENSMUSG00000019891.16_0	chr10	+	3006	11	FSM	ENSMUSG00000019891.16	ENSMUST00000069004.14	3024	11	10	8	-8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAGAGCCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	52109724	52197464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_52109932_52137822_52138036_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ENSMUSG00000019891.16_2	chr10	+	2785	10	FSM	ENSMUSG00000019891.16	ENSMUST00000218582.2	2795	10	0	10	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAGAGCCCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	52109732	52197464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_52109932_52160198_52160334_52162443_52162496_52166946_52167020_52180682_52180817_52187495_52187537_52188909_52188998_52190450_52190501_52193127_52193248_52195571
ENSMUSG00000019894.15_0	chr10	+	1003	4	FSM	ENSMUSG00000019894.15	ENST00000680714.1	1020	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTTAGGGGTACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	103203801	103231068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_103204015_103224757_103225203_103229761_103229889_103230850
ENSMUSG00000019894.15_12	chr10	+	2763	8	FSM	ENSMUSG00000019894.15	ENST00000680892.1	2778	8	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACAAAGTCACAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	103203804	103255374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_103204015_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019894.15_3	chr10	+	3675	12	FSM	ENSMUSG00000019894.15	ENST00000266682.10	3690	12	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAACAAAGTCACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	103203803	103255373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_103204015_103224757_103225203_103229251_103229410_103229761_103229889_103230850_103231033_103236042_103236154_103240145_103240388_103240487_103240681_103244063_103244257_103245513_103245674_103252493_103252657_103253883
ENSMUSG00000019897.9_0	chr10	+	1793	4	FSM	ENSMUSG00000019897.9	ENSMUST00000020049.9	1813	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGAATGGAGTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	105676938	105683685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_105677517_105678402_105678710_105681210_105681311_105682877
ENSMUSG00000019899.18_0	chr10	-	9442	62	FSM	ENSMUSG00000019899.18	ENST00000421865.3	9459	62	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAATAAGTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27343363	26857288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_26857649_26860286_26860510_26862785_26862917_26865311_26865466_26866801_26866958_26868908_26869099_26869398_26869512_26876712_26876882_26877121_26877299_26882675_26882825_26891374_26891552_26894402_26894524_26899259_26899407_26906165_26906311_26907016_26907180_26911952_26912078_26917068_26917229_26919534_26919669_26920430_26920575_26926193_26926349_26930498_26930682_26932524_26932642_26946261_26946365_26977324_26977464_26980099_26980264_26981102_26981220_26994474_26994686_26995903_26996067_27000461_27000574_27009962_27010062_27014858_27015002_27031351_27031546_27034773_27034861_27040897_27041023_27052658_27052794_27060379_27060498_27063741_27063876_27063963_27064153_27064256_27064437_27065119_27065264_27066480_27066718_27073293_27073431_27080796_27080978_27084324_27084432_27088038_27088251_27099978_27100066_27107570_27107699_27111708_27111823_27119666_27119779_27140913_27141126_27142604_27142707_27200576_27200751_27204040_27204182_27220408_27220570_27222990_27223091_27226248_27226428_27239538_27239657_27242057_27242148_27244972_27245153_27298467_27298711_27335289_27335403_27343199
ENSMUSG00000019899.18_2	chr10	-	9589	64	NIC	ENSMUSG00000019899.18	novel	9614	65	NA	NA	11	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAATAAGTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27492828	26857288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_26857649_26860286_26860510_26862785_26862917_26865311_26865466_26866801_26866958_26868908_26869099_26869398_26869512_26876712_26876882_26877121_26877299_26882675_26882825_26891374_26891552_26894402_26894524_26897456_26897469_26899267_26899407_26906165_26906311_26907016_26907180_26911952_26912078_26917068_26917229_26919534_26919669_26920430_26920575_26926193_26926349_26930498_26930682_26932524_26932642_26946261_26946365_26977324_26977464_26980099_26980264_26981102_26981220_26994474_26994686_26995903_26996067_27000461_27000574_27009962_27010062_27014858_27015002_27031351_27031546_27034773_27034861_27040897_27041023_27052658_27052794_27060379_27060498_27063741_27063876_27063963_27064153_27064256_27064437_27065119_27065264_27066480_27066718_27073293_27073431_27080796_27080978_27084324_27084432_27088038_27088251_27099978_27100066_27107570_27107699_27111708_27111823_27119666_27119779_27140913_27141126_27142604_27142707_27200576_27200751_27204040_27204182_27220408_27220570_27222990_27223091_27226248_27226428_27239538_27239657_27242057_27242148_27244972_27245153_27298467_27298711_27335289_27335403_27343199_27343371_27492692
ENSMUSG00000019899.18_3	chr10	-	9534	63	NIC	ENSMUSG00000019899.18	novel	9614	65	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAATAAGTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	27492785	26857288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_26857649_26860286_26860510_26862785_26862917_26865311_26865466_26866801_26866958_26868908_26869099_26869398_26869512_26876712_26876882_26877121_26877299_26882675_26882825_26891374_26891552_26894402_26894524_26899267_26899407_26906165_26906311_26907016_26907180_26911952_26912078_26917068_26917229_26919534_26919669_26920430_26920575_26926193_26926349_26930498_26930682_26932524_26932642_26946261_26946365_26977324_26977464_26980099_26980264_26981102_26981220_26994474_26994686_26995903_26996067_27000461_27000574_27009962_27010062_27014858_27015002_27031351_27031546_27034773_27034861_27040897_27041023_27052658_27052794_27060379_27060498_27063741_27063876_27063963_27064153_27064256_27064437_27065119_27065264_27066480_27066718_27073293_27073431_27080796_27080978_27084324_27084432_27088038_27088251_27099978_27100066_27107570_27107699_27111708_27111823_27119666_27119779_27140913_27141126_27142604_27142707_27200576_27200751_27204040_27204182_27220408_27220570_27222990_27223091_27226248_27226428_27239538_27239657_27242057_27242148_27244972_27245153_27298467_27298711_27335289_27335403_27343199_27343371_27492692
ENSMUSG00000019907.11_2	chr10	+	3330	25	FSM	ENSMUSG00000019907.11	ENSMUST00000219263.2	3355	25	17	8	17	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTGGCAGTCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	107998070	108113204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109998_108110050_108113067
ENSMUSG00000019907.11_8	chr10	+	3366	26	FSM	ENSMUSG00000019907.11	ENSMUST00000070663.6	3403	26	31	6	31	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCCAGATATGCCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107998291	108113430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_107998498_108034693_108034825_108050248_108050368_108066297_108066458_108069859_108070005_108075965_108076041_108076639_108076729_108076981_108077140_108078866_108078992_108085295_108085512_108086774_108086870_108087700_108087806_108088617_108088786_108089185_108089357_108095616_108095708_108096696_108096898_108097105_108097278_108098170_108098293_108100563_108100630_108103264_108103282_108104432_108104569_108105114_108105220_108107582_108107631_108109255_108109287_108109998_108110050_108113067
ENSMUSG00000019916.15_0	chr10	+	4027	15	FSM	ENSMUSG00000019916.15	ENSMUST00000009789.15	4043	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTACTTTCTATGTACA	NA	NA	NA	NA	NA	NA	NA	NA	59159126	59209119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59190161_59190233_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_11	chr10	+	2910	15	FSM	ENSMUSG00000019916.15	ENSMUST00000105466.3	2918	15	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGGGCTCCGGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	59159197	59208073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59184002_59184243_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019916.15_9	chr10	+	2385	14	FSM	ENSMUSG00000019916.15	ENSMUST00000092512.11	2387	14	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTCTCTGTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	59159187	59207778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59159299_59172875_59172979_59175117_59175215_59178505_59178658_59179478_59179617_59186225_59186423_59187904_59188082_59191171_59191243_59197682_59197783_59201110_59201165_59203110_59203177_59205062_59205132_59205408_59205506_59206825
ENSMUSG00000019917.11_0	chr10	-	1808	10	FSM	ENSMUSG00000019917.11	ENSMUST00000220156.2	1821	10	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAATATTTTGCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	59057659	58977451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_58977563_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019917.11_6	chr10	-	2513	10	FSM	ENSMUSG00000019917.11	ENSMUST00000165971.3	2532	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGACCAATCTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	59057658	58999949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59000767_59002325_59002514_59006635_59006769_59012669_59012839_59014582_59014680_59016841_59017004_59019346_59019534_59027987_59028184_59028519_59028638_59057212
ENSMUSG00000019920.19_0	chr10	+	4312	10	FSM	ENSMUSG00000019920.19	ENSMUST00000020078.14	4327	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATAGTGTGTTACATAT	NA	NA	NA	NA	NA	NA	NA	NA	58159295	58260506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58159510_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUSG00000019920.19_4	chr10	+	4335	10	FSM	ENSMUSG00000019920.19	ENSMUST00000238939.2	4351	10	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTCATAGTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	58207280	58260502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58207522_58234842_58235003_58243891_58243959_58245381_58245503_58245874_58246025_58248224_58248376_58249794_58249888_58252455_58252505_58254220_58254297_58257275
ENSMUSG00000019923.15_0	chr10	+	1814	8	FSM	ENSMUSG00000019923.15	ENSMUST00000020081.11	1834	8	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTATCCAGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72490687	72510787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72509797
ENSMUSG00000019923.15_13	chr10	+	1056	7	ISM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	1087	0	1087	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTGATGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72491814	72504997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019923.15_3	chr10	+	2670	8	FSM	ENSMUSG00000019923.15	ENSMUST00000105431.8	2676	8	1	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAACTTACGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72490727	72505616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72503730
ENSMUSG00000019923.15_4	chr10	+	1127	8	FSM	ENSMUSG00000019923.15	ENSMUST00000160337.2	1138	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCTTTGTTGTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	72490731	72504990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_72490810_72491814_72491906_72492069_72492194_72492361_72492529_72492648_72492706_72492877_72493018_72493097_72493221_72504643
ENSMUSG00000019927.7_0	chr10	-	1410	7	FSM	ENSMUSG00000019927.7	ENSMUST00000020085.7	1431	7	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCGTCTTGACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	71121077	71090815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_71091705_71092444_71092539_71094030_71094137_71095571_71095650_71097913_71097946_71098028_71098093_71120930
ENSMUSG00000019929.17_0	chr10	+	1735	8	FSM	ENSMUSG00000019929.17	ENSMUST00000105287.11	1758	8	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAAAATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97315477	97353989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_97315652_97319200_97319421_97330863_97330977_97342354_97342569_97343564_97343679_97345826_97345921_97349460_97349600_97353322
ENSMUSG00000019929.17_1	chr10	+	368	2	FSM	ENSMUSG00000019929.17	ENST00000551354.1	398	2	8	22	8	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCGCAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97319199	97320295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_97319421_97320148
ENSMUSG00000019929.17_3	chr10	+	481	3	FSM	ENSMUSG00000019929.17	ENST00000441303.6	504	3	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACAAGTAACCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	97319234	97353504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_97319421_97330863_97330977_97353322
ENSMUSG00000019933.8_0	chr10	+	430	3	FSM	ENSMUSG00000019933.8	ENSMUST00000020090.8	443	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGACGTGTGGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	70040502	70055534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_70040590_70052781_70052897_70055306
ENSMUSG00000019933.8_1	chr10	+	343	2	ISM	ENSMUSG00000019933.8	ENSMUST00000020090.8	443	3	12285	7	12285	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGACGTGTGGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	70052781	70055534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_70052897_70055306
ENSMUSG00000019935.17_0	chr10	-	1662	11	FSM	ENSMUSG00000019935.17	ENST00000392989.3	1677	11	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTGGCTTCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	89456769	89412179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89412520_89413762_89413891_89419257_89419369_89425357_89425491_89427883_89428024_89428737_89428825_89433306_89433395_89434498_89434614_89436064_89436184_89442438_89442731_89456660
ENSMUSG00000019942.14_0	chr10	-	4354	8	FSM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	8	13	8	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	2603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAAACAGAAAACCGGACT	NA	NA	NA	NA	NA	NA	NA	NA	69188760	69170988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925_69185989_69188665
ENSMUSG00000019942.14_1	chr10	-	4260	7	ISM	ENSMUSG00000019942.14	ENSMUST00000020099.13	4375	8	2778	14	-18	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAACAGAAAACCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	69185990	69170989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925
ENSMUSG00000019942.14_10	chr10	-	1108	7	FSM	ENSMUSG00000019942.14	ENST00000614696.4	1115	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCAGATGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	69185972	69174142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_69174427_69176310_69176472_69176544_69176709_69178369_69178541_69180890_69181015_69181904_69182062_69185925
ENSMUSG00000019942.14_7	chr10	-	864	5	ISM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	3918	7	3918	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCAGATGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	69182054	69174142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_69174427_69176310_69176453_69176544_69176709_69180890_69181015_69181904
ENSMUSG00000019942.14_8	chr10	-	918	6	FSM	ENSMUSG00000019942.14	ENST00000316629.8	925	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCAGATGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	69185972	69174142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_69174427_69176310_69176453_69176544_69176709_69180890_69181015_69181904_69182062_69185925
ENSMUSG00000019943.11_0	chr10	+	7118	21	FSM	ENSMUSG00000019943.11	ENSMUST00000020107.8	7130	21	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98751023	98862003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_98751234_98804555_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98858669
ENSMUSG00000019943.11_11	chr10	+	7056	21	FSM	ENSMUSG00000019943.11	ENST00000359142.7	7068	21	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGACTGAACTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	98804561	98862003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_98804987_98815565_98815764_98822752_98823008_98823102_98823229_98826923_98827065_98829728_98829768_98830507_98830670_98832629_98832845_98835600_98835844_98837149_98837392_98839002_98839241_98845265_98845446_98846063_98846152_98846535_98846643_98850320_98850513_98850745_98850960_98851345_98851558_98852784_98852893_98854576_98854760_98855139_98855294_98858669
ENSMUSG00000019944.15_0	chr10	+	4315	11	FSM	ENSMUSG00000019944.15	ENSMUST00000020101.12	4352	11	22	15	-20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTATAAAAAAAAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	69048485	69127606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_69048565_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ENSMUSG00000019944.15_3	chr10	+	4373	11	FSM	ENSMUSG00000019944.15	ENSMUST00000067908.14	4422	11	45	4	45	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTATAAAAAAAAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	69049068	69127606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_69049206_69051131_69051183_69084600_69084803_69085454_69085559_69102016_69102203_69105732_69106704_69108568_69108688_69115174_69115326_69121516_69121606_69124779_69124886_69125349
ENSMUSG00000019947.11_0	chr10	-	7581	10	FSM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTGTCTGTCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	68114570	67928349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ENSMUSG00000019947.11_1	chr10	-	7516	9	ISM	ENSMUSG00000019947.11	ENSMUST00000219238.2	7581	10	570	0	566	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGTGTCTGTCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	68114000	67928349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_68021855_68022087_68078833_68079060_68113759
ENSMUSG00000019947.11_3	chr10	-	3003	7	FSM	ENSMUSG00000019947.11	ENSMUST00000218532.2	3025	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTCTTGGAGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67972442	67932291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67934500_67937724_67937924_67954080_67954179_67962528_67962582_67964618_67964824_67970823_67970937_67972315
ENSMUSG00000019947.11_4	chr10	-	1274	5	FSM	ENSMUSG00000019947.11	ENST00000644638.1	1279	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGTCCCTCGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	68114566	67993948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67994464_68021855_68022087_68078833_68079060_68113759_68114015_68114519
ENSMUSG00000019947.11_5	chr10	-	1222	4	ISM	ENSMUSG00000019947.11	ENST00000644638.1	1279	5	557	5	557	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACGTCCCTCGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	68114009	67993948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_67994464_68021855_68022087_68078833_68079060_68113759
ENSMUSG00000019948.5_0	chr10	-	1687	11	FSM	ENSMUSG00000019948.5	ENSMUST00000020109.5	1705	11	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATATTAAATATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	89568150	89547843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89568035
ENSMUSG00000019948.5_7	chr10	-	1622	11	FSM	ENSMUSG00000019948.5	ENST00000546902.5	1642	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACAAACTGAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	89568116	89548010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89548423_89550731_89550871_89552934_89553107_89560861_89560941_89561032_89561132_89561463_89561521_89561629_89561766_89562498_89562623_89564015_89564085_89564761_89564880_89567899
ENSMUSG00000019951.11_0	chr10	+	6429	21	FSM	ENSMUSG00000019951.11	ENSMUST00000020112.7	6448	21	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTCAATATACTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	89580862	89655724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_89581151_89608448_89608612_89609941_89609981_89611800_89611893_89615696_89615887_89616988_89617130_89618431_89618603_89622966_89623148_89625159_89625244_89626412_89626596_89627224_89627344_89630344_89630487_89638880_89639075_89640573_89642076_89642485_89642659_89644379_89644523_89645489_89645641_89647348_89647603_89647905_89648015_89651901_89652084_89653796
ENSMUSG00000019952.16_0	chr10	+	2844	12	FSM	ENSMUSG00000019952.16	ENSMUST00000020113.15	2862	12	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAGACGACATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98942905	99033840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_98943086_98943653_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUSG00000019952.16_4	chr10	+	3434	11	FSM	ENSMUSG00000019952.16	ENSMUST00000159990.2	3449	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATCAATGTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	98942972	99033929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_98943739_98960692_98960865_98965344_98965525_98980096_98980205_98980340_98980457_98988662_98988797_98990930_98991000_98992063_98992214_99000730_99000812_99028643_99028860_99032487
ENSMUSG00000019960.9_0	chr10	+	2783	3	FSM	ENSMUSG00000019960.9	ENSMUST00000020118.5	2796	3	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGAGCGTGTTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	99099101	99103346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_99099954_99100405_99100844_99101853
ENSMUSG00000019961.18_0	chr10	-	3513	9	FSM	ENSMUSG00000019961.18	ENSMUST00000072239.14	3533	9	12	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTAGTTTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	91007432	90983440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019961.18_4	chr10	-	1170	9	FSM	ENSMUSG00000019961.18	ENST00000575258.1	1183	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAAGAAATCATTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	91007018	90985343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90985621_90987570_90987660_90988489_90988601_90988946_90989043_90989139_90989260_90994609_90994708_90999904_91000064_91001804_91001932_91006925
ENSMUSG00000019961.18_7	chr10	-	2939	5	FSM	ENSMUSG00000019961.18	ENST00000266732.8	2957	5	12	6	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTTTGTGTGGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	91007350	90996280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90996967_90997707_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019961.18_8	chr10	-	3753	4	FSM	ENSMUSG00000019961.18	ENSMUST00000020123.7	3772	4	10	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGAACAGTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91007430	90996287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90999224_90999904_91000064_91001804_91001932_91006899
ENSMUSG00000019966.19_0	chr10	+	5631	10	FSM	ENSMUSG00000019966.19	ENSMUST00000105283.9	5648	10	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCATAAATCTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	99851497	99936267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_99851898_99887707_99887822_99899945_99900009_99912596_99912768_99915835_99915993_99916718_99916803_99923208_99923319_99924014_99924083_99925057_99925134_99931879
ENSMUSG00000019969.15_0	chr12	+	2677	12	FSM	ENSMUSG00000019969.15	ENSMUST00000041806.13	2690	12	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGCTCTCTGTCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	83734936	83781867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83735068_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019969.15_10	chr12	+	1218	9	FSM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTAGCCTTTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	83746342	83780837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83778447_83778567_83780689
ENSMUSG00000019969.15_13	chr12	+	1137	8	ISM	ENSMUSG00000019969.15	ENST00000557511.5	1230	9	12737	8	12737	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTAGCCTTTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	83759075	83780837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83778447_83778567_83780689
ENSMUSG00000019969.15_7	chr12	+	3015	12	FSM	ENSMUSG00000019969.15	ENSMUST00000101225.2	3023	12	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGTCAGTTCAGAACCA	NA	NA	NA	NA	NA	NA	NA	NA	83735343	83781972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83735708_83746128_83746196_83746285_83746426_83759077_83759329_83761537_83761680_83769764_83769833_83771269_83771491_83774999_83775099_83775471_83775559_83777312_83777487_83778447_83778567_83780689
ENSMUSG00000019970.16_0	chr10	+	2590	12	FSM	ENSMUSG00000019970.16	ENSMUST00000164659.8	2602	12	6	6	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCATAAATTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	21854576	21875791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21854882_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019970.16_1	chr10	+	2476	12	FSM	ENSMUSG00000019970.16	ENSMUST00000100036.10	2476	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	21868121	21875797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21868307_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019970.16_2	chr10	+	2558	12	FSM	ENSMUSG00000019970.16	ENSMUST00000092673.11	2576	12	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTTGAAAACTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	21869792	21875776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21870081_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019970.16_3	chr10	+	2444	12	FSM	ENSMUSG00000019970.16	ENSMUST00000020145.12	2456	12	7	5	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGTGTCATGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	21870571	21875797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21870725_21870864_21870941_21871372_21871449_21871692_21871798_21871924_21872009_21872121_21872254_21872457_21872571_21872877_21873002_21873240_21873337_21873796_21873953_21874058_21874149_21874558
ENSMUSG00000019971.11_18	chr10	+	7605	53	FSM	ENSMUSG00000019971.11	ENST00000675230.1	7617	53	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTAGTGCCCTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100323447	100408960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ENSMUSG00000019971.11_27	chr10	+	8478	56	FSM	ENSMUSG00000019971.11	ENST00000675476.1	8490	56	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTAGTGCCCTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100323447	100408960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331502_100331524_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100348445_100349205_100349422_100349516_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100397970_100398094_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ENSMUSG00000019971.11_8	chr10	+	7502	53	FSM	ENSMUSG00000019971.11	ENST00000673058.2	7515	53	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTAGTGCCCTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100323448	100408960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100323615_100324140_100324271_100324423_100324502_100325181_100325252_100326008_100326056_100328509_100328654_100330762_100330817_100331502_100331524_100331684_100331838_100332550_100332734_100333801_100333892_100334923_100335047_100336008_100336133_100336964_100337138_100344525_100344689_100346348_100346450_100346523_100346612_100348148_100348262_100349781_100349867_100350319_100350463_100350995_100351161_100352015_100352166_100353638_100353755_100354315_100354419_100354506_100354738_100359091_100359266_100364410_100364523_100365879_100366086_100366962_100367115_100372667_100372780_100373297_100373754_100374787_100374953_100375845_100375954_100376197_100376333_100377411_100377679_100378278_100378387_100379103_100379304_100380778_100380993_100382236_100382375_100384589_100384812_100385114_100385238_100387225_100387372_100387678_100387835_100390272_100390397_100393932_100394068_100395466_100395554_100397101_100397267_100399127_100399301_100402872_100403015_100403942_100404017_100404676_100404772_100407924_100408005_100408741
ENSMUSG00000019975.13_0	chr10	+	1319	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020150.10	1328	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATTTTGCTCCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	90918810	90938469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_90919159_90929000_90929119_90937616
ENSMUSG00000019975.13_1	chr10	+	3213	3	FSM	ENSMUSG00000019975.13	ENSMUST00000020149.6	3232	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAGCATATAGAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	90918930	90934512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_90919159_90929000_90929119_90931645
ENSMUSG00000019977.17_0	chr10	+	2773	18	FSM	ENSMUSG00000019977.17	ENSMUST00000020153.10	2793	18	10	10	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAAAAATGTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21171887	21244787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212874_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_12	chr10	+	2716	18	FSM	ENSMUSG00000019977.17	ENSMUST00000219915.2	2733	18	11	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGAATGTATTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21171942	21244776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_15	chr10	+	2603	5	FSM	ENSMUSG00000019977.17	ENSMUST00000092674.14	2625	5	17	5	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGTTTGCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	21171953	21187103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997
ENSMUSG00000019977.17_18	chr10	+	745	6	FSM	ENSMUSG00000019977.17	ENST00000314674.7	752	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCAAGCCCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	21172032	21212976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865
ENSMUSG00000019977.17_22	chr10	+	698	5	ISM	ENSMUSG00000019977.17	ENST00000314674.7	752	6	3048	7	3048	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGCAAGCCCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	21175080	21212976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_21175143_21180428_21180543_21183483_21183679_21184997_21185214_21212865
ENSMUSG00000019977.17_3	chr10	+	2619	17	FSM	ENSMUSG00000019977.17	ENST00000367826.6	2639	17	13	7	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGAATGTATTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21171925	21244776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21183483_21183679_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019977.17_5	chr10	+	2542	17	FSM	ENSMUSG00000019977.17	ENST00000415177.6	2558	17	9	7	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTGAATGTATTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21171921	21244776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21172076_21175076_21175143_21180428_21180543_21212865_21212975_21217612_21217879_21218297_21218464_21220975_21221094_21223160_21223308_21225210_21225286_21227825_21227944_21228440_21228510_21230537_21230643_21234211_21234303_21234630_21234740_21240573_21240675_21243540_21243686_21244187
ENSMUSG00000019978.17_0	chr10	+	4365	20	FSM	ENSMUSG00000019978.17	ENSMUST00000053748.16	4385	20	14	6	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATAAATGTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	25235709	25399407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_25235880_25317470_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25369464_25369528_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388980_25398194
ENSMUSG00000019978.17_12	chr10	+	2392	14	FSM	ENSMUSG00000019978.17	ENST00000525271.5	2405	14	10	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTTAGATAGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	25317482	25398608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_15	chr10	+	3727	17	FSM	ENSMUSG00000019978.17	ENST00000530481.5	3748	17	11	10	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATAAATGTGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	25317483	25399407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25377721_25378037_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019978.17_24	chr10	+	2044	14	FSM	ENSMUSG00000019978.17	ENST00000525193.5	2070	14	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAGAAGAATAAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	25317496	25388964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_25317956_25319639_25319853_25336689_25336795_25343993_25344037_25345093_25345170_25347316_25347536_25348973_25349062_25354906_25355060_25355565_25355664_25360105_25360279_25364848_25364992_25382072_25382172_25383674_25383756_25388870
ENSMUSG00000019978.17_33	chr10	+	1779	8	FSM	ENSMUSG00000019978.17	ENST00000524581.5	1796	8	11	6	11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGCAATTTTCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25368905	25398616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_25369136_25371342_25371490_25377721_25378286_25380034_25380158_25382072_25382172_25383674_25383756_25388870_25388984_25398194
ENSMUSG00000019979.13_21	chr10	-	1109	7	FSM	ENSMUSG00000019979.13	ENST00000552268.5	1121	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGAAATGGCTAAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	90915900	90827318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90827459_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748
ENSMUSG00000019979.13_6	chr10	-	3720	25	FSM	ENSMUSG00000019979.13	ENST00000547045.5	3737	25	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATTACAAAAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	90915877	90827203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90827459_90831509_90831657_90833073_90833200_90835513_90835640_90836871_90836992_90844985_90845112_90849921_90850039_90854827_90854948_90856517_90856644_90867410_90867573_90872771_90872898_90875646_90875779_90883947_90884074_90885219_90885347_90890241_90890427_90891776_90891891_90894172_90894305_90895434_90895603_90895909_90896149_90897559_90897692_90897965_90898079_90902942_90903127_90913395_90913594_90915308_90915499_90915748
ENSMUSG00000019982.16_0	chr10	-	3293	15	FSM	ENSMUSG00000019982.16	ENST00000316528.12	3310	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACATACTTCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	21036820	21000843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_21002189_21015191_21015251_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21022084_21022340_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238_21032357_21036594
ENSMUSG00000019982.16_2	chr10	-	2856	13	FSM	ENSMUSG00000019982.16	ENST00000525369.5	2871	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACATACTTCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	21032351	21000843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_21002189_21015191_21015300_21016465_21016577_21017657_21017784_21017870_21017986_21018860_21018992_21024230_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21030582_21030655_21032238
ENSMUSG00000019982.16_24	chr10	-	849	6	FSM	ENSMUSG00000019982.16	ENST00000420123.6	866	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGTTACCTTGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	21032350	21024228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_21024336_21024676_21024758_21026204_21026440_21028334_21028556_21028790_21028884_21032238
ENSMUSG00000019984.17_0	chr10	+	5086	30	FSM	ENSMUSG00000019984.17	ENSMUST00000092646.13	5098	30	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATCTCCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	24745887	24789571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24746045_24746351_24746384_24746561_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019984.17_10	chr10	+	4078	28	FSM	ENSMUSG00000019984.17	ENST00000368060.7	4086	28	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTGCCAGCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24745987	24788689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019984.17_11	chr10	+	2651	20	FSM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTTACCATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24745987	24778387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_16	chr10	+	4095	29	FSM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTGCCAGCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24745988	24788689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24746045_24746537_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019984.17_64	chr10	+	2589	19	ISM	ENSMUSG00000019984.17	ENST00000368053.8	2655	20	555	4	555	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTTTTACCATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24746542	24778387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190
ENSMUSG00000019984.17_65	chr10	+	4035	28	ISM	ENSMUSG00000019984.17	ENST00000354577.8	4102	29	554	6	554	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTGCCAGCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24746541	24788689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24759101_24759120_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019984.17_71	chr10	+	4016	27	ISM	ENSMUSG00000019984.17	ENST00000368060.7	4086	28	555	8	555	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGTGCCAGCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24746542	24788689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_24746650_24749370_24749496_24750467_24750580_24751493_24751593_24752837_24752940_24754286_24754357_24755570_24755684_24758451_24758548_24764297_24764499_24767016_24767161_24768411_24768558_24769512_24769759_24771603_24771747_24773082_24773258_24774307_24774472_24776593_24776719_24777900_24778107_24778190_24778372_24779558_24779730_24780158_24780376_24781719_24781957_24783079_24783246_24783832_24783906_24784530_24784746_24785695_24785817_24786631_24786764_24788560
ENSMUSG00000019986.18_0	chr10	+	4844	24	FSM	ENSMUSG00000019986.18	ENSMUST00000105525.12	4851	24	6	1	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCTGGTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20828451	20956327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20828652_20835510_20835980_20838963_20839134_20839571_20839792_20841415_20841609_20841824_20841921_20844886_20845073_20846747_20846901_20847922_20848056_20852895_20853020_20855278_20855509_20857222_20857330_20860203_20860323_20862868_20863000_20864442_20864584_20876404_20876605_20883650_20883678_20893811_20893933_20917084_20917141_20930879_20931043_20934051_20934150_20948441_20948501_20950273_20950377_20954982
ENSMUSG00000019987.10_0	chr10	-	962	4	FSM	ENSMUSG00000019987.10	ENST00000673427.1	980	4	7	11	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAAAATTCTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24796690	24791127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_24791678_24791925_24792063_24792252_24792358_24796520
ENSMUSG00000019988.8_0	chr10	-	3520	15	FSM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAGACAGTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	92558275	92520614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347_92555492_92558184
ENSMUSG00000019988.8_4	chr10	-	3431	14	ISM	ENSMUSG00000019988.8	ENSMUST00000020163.7	3534	15	2789	7	2789	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTAGACAGTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	92555493	92520614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_92522158_92522581_92522649_92525496_92525654_92526489_92526647_92527695_92527899_92528749_92528798_92530841_92530971_92534031_92534228_92534587_92534790_92536581_92536812_92547032_92547174_92549935_92550053_92552027_92552123_92555347
ENSMUSG00000019989.9_0	chr10	-	4236	25	FSM	ENSMUSG00000019989.9	ENSMUST00000020169.9	4253	25	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTCAGAAGGCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24712114	24648311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_24649971_24650680_24650838_24652658_24652792_24653791_24653870_24654590_24654724_24660687_24660843_24662356_24662412_24663616_24663796_24667886_24667975_24669482_24669550_24671583_24671712_24673656_24673689_24674049_24674179_24675055_24675165_24680296_24680370_24681766_24681833_24683343_24683454_24683975_24684096_24685751_24685832_24693764_24693863_24696469_24696531_24700700_24700827_24702073_24702197_24707628_24707705_24711913
ENSMUSG00000019990.16_0	chr10	-	4099	13	FSM	ENSMUSG00000019990.16	ENSMUST00000020165.14	4137	13	28	10	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGTTAAAACACAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	20600796	20273759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_20276379_20282873_20282955_20286088_20286186_20288741_20288887_20294477_20294570_20310210_20310343_20311941_20312043_20314470_20314567_20316510_20316575_20318963_20319116_20355420_20355505_20494875_20494937_20600421
ENSMUSG00000019992.9_0	chr10	+	1973	7	FSM	ENSMUSG00000019992.9	ENSMUST00000169712.3	1991	7	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGGTTGAGTATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	20223531	20237048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20223670_20224080_20224182_20228569_20228675_20229112_20229226_20229775_20230012_20233000_20233513_20236280
ENSMUSG00000019996.18_11	chr10	+	3919	19	FSM	ENSMUSG00000019996.18	ENST00000617204.4	3928	19	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTAGGGTTCCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046740	20157330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137580_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741_20156373_20156544
ENSMUSG00000019996.18_26	chr10	+	2916	18	FSM	ENSMUSG00000019996.18	ENST00000454590.5	2929	18	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTCTGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20046938	20156377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20047068_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019996.18_47	chr10	+	2582	18	FSM	ENSMUSG00000019996.18	ENST00000544465.5	2593	18	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCACACAGATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20081121	20156072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20081222_20106529_20106629_20109114_20109193_20121015_20121180_20122343_20122462_20126115_20126227_20132929_20133044_20137604_20137730_20142481_20142598_20142868_20143159_20145105_20145335_20149025_20149201_20149524_20149627_20149991_20150043_20150347_20150406_20151921_20152022_20153870_20154092_20155741
ENSMUSG00000019997.12_0	chr10	+	2387	5	FSM	ENSMUSG00000019997.12	ENSMUST00000020171.12	2398	5	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAAAGGCTTGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24471347	24474573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24471687_24471773_24471997_24472244_24472497_24472629_24472842_24473212
ENSMUSG00000019998.7_0	chr10	+	2488	10	FSM	ENSMUSG00000019998.7	ENSMUST00000020174.7	2502	10	12	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTGAGTCCCAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	24025226	24064857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24025625_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_2	chr10	+	3428	10	FSM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTTTTAGAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24025228	24066117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_24025307_24031132_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000019998.7_9	chr10	+	3350	9	ISM	ENSMUSG00000019998.7	ENSMUST00000220041.2	3435	10	5908	3	5908	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAGTTTTAGAATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24031132	24066117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_24031283_24053063_24053134_24055014_24055109_24055823_24055962_24056760_24056814_24057415_24057513_24058666_24058740_24060884_24060968_24063525
ENSMUSG00000020003.17_0	chr10	-	8078	10	FSM	ENSMUSG00000020003.17	ENSMUST00000020182.16	8099	10	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGAACCATACTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	19783427	19729658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_19736741_19745039_19745140_19760523_19760580_19762805_19762920_19764401_19764509_19769995_19770105_19770470_19770549_19780308_19780460_19781590_19781649_19783204
ENSMUSG00000020009.14_0	chr10	+	2094	7	FSM	ENSMUSG00000020009.14	ENSMUST00000020188.13	2112	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAAAACTCACTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	19467705	19485968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_19467946_19473163_19473279_19477067_19477232_19479501_19479681_19481981_19482169_19483004_19483130_19484884
ENSMUSG00000020010.8_0	chr10	+	1527	7	FSM	ENSMUSG00000020010.8	ENST00000367927.9	1538	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGGGACCCCACCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	23727466	23745561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23727695_23727801_23727936_23732095_23732289_23740235_23740528_23741525_23741897_23742991_23743166_23745426
ENSMUSG00000020010.8_1	chr10	+	1520	7	FSM	ENSMUSG00000020010.8	ENSMUST00000020190.8	1811	7	104	187	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTCATTGGGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	23727463	23745554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23727695_23727804_23727936_23732095_23732289_23740235_23740528_23741525_23741897_23742991_23743166_23745426
ENSMUSG00000020010.8_5	chr10	+	1188	6	FSM	ENSMUSG00000020010.8	ENST00000427187.6	1203	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCCCTTCATTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	23727502	23745550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23727695_23727801_23727936_23732095_23732289_23741525_23741897_23742991_23743166_23745426
ENSMUSG00000020015.11_0	chr10	+	3601	17	FSM	ENSMUSG00000020015.11	ENSMUST00000069965.9	3615	17	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAATGTGATTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	92996757	93077182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_92997063_93044033_93044181_93047772_93047938_93052204_93052339_93053825_93053952_93057448_93057506_93060797_93060913_93061885_93061981_93062574_93062638_93064506_93064631_93068241_93068363_93071299_93071398_93071888_93071995_93072782_93072826_93073655_93073747_93074827_93074906_93075449
ENSMUSG00000020018.7_0	chr10	-	843	4	FSM	ENSMUSG00000020018.7	ENSMUST00000020203.7	861	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTATGATTTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	93425558	93418898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93419393_93419891_93419957_93423859_93423986_93425400
ENSMUSG00000020019.5_1	chr10	+	1801	9	FSM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGACTGCGTGTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	93477315	93581698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_93477371_93480332_93480863_93518279_93518559_93543139_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93576912_93577084_93581578
ENSMUSG00000020019.5_3	chr10	+	1738	8	ISM	ENSMUSG00000020019.5	ENST00000553059.1	1812	9	3026	10	3026	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACTGCGTGTAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	93480341	93581699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_93480863_93518279_93518559_93543139_93543267_93546339_93546529_93569468_93569683_93570034_93570151_93576912_93577084_93581578
ENSMUSG00000020022.18_0	chr10	+	1043	4	FSM	ENSMUSG00000020022.18	ENSMUST00000020209.16	1110	4	49	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	4342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGTCCACTAAAACCACC	NA	NA	NA	NA	NA	NA	NA	NA	94034865	94057287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_94034993_94035811_94035895_94039149_94039238_94056542
ENSMUSG00000020023.19_0	chr10	+	5512	4	FSM	ENSMUSG00000020023.19	ENSMUST00000065060.12	5530	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACATTTGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	94350727	94426809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_94350967_94414284_94415202_94418135_94418272_94422589
ENSMUSG00000020023.19_2	chr10	+	3295	4	FSM	ENSMUSG00000020023.19	ENSMUST00000117929.2	3317	4	2	20	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGTCCAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	94412126	94424643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_94412315_94414284_94415202_94418135_94418272_94422589
ENSMUSG00000020024.8_0	chr10	+	3617	16	FSM	ENSMUSG00000020024.8	ENSMUST00000020212.6	3639	16	7	15	7	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACTAGAAAAGACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	94524522	94626700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_94524909_94554713_94554982_94555453_94555605_94561508_94561602_94564452_94564585_94573634_94573887_94575918_94576051_94584802_94584918_94586120_94586266_94586371_94586522_94602303_94602380_94604680_94604839_94606806_94606937_94622605_94622710_94624508_94624699_94625565
ENSMUSG00000020027.19_0	chr10	-	2140	3	FSM	ENSMUSG00000020027.19	ENSMUST00000172070.8	2153	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTACTTTGAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95251339	95247357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95248973_95250692_95251054_95251175
ENSMUSG00000020027.19_1	chr10	-	2180	3	FSM	ENSMUSG00000020027.19	ENSMUST00000170690.8	2195	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTACTTTGAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95252065	95247357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95248973_95250692_95251054_95251861
ENSMUSG00000020027.19_2	chr10	-	2206	3	FSM	ENSMUSG00000020027.19	ENSMUST00000020215.16	2222	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTACTTTGAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	95252709	95247357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95248973_95250692_95251054_95252479
ENSMUSG00000020029.7_0	chr10	-	3187	5	FSM	ENSMUSG00000020029.7	ENSMUST00000020217.7	3210	5	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACCTCTGTATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95399995	95382878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95385353_95385637_95385723_95387310_95387356_95388347_95388459_95399523
ENSMUSG00000020029.7_1	chr10	-	880	4	FSM	ENSMUSG00000020029.7	ENST00000547014.5	893	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAAAGAGAGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	95388452	95384710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347
ENSMUSG00000020029.7_7	chr10	-	526	5	FSM	ENSMUSG00000020029.7	ENST00000578341.2	544	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATAGAGGGTTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	95399611	95385158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95385353_95385637_95385726_95387310_95387356_95388347_95388459_95399523
ENSMUSG00000020034.8_0	chr10	+	2705	10	FSM	ENSMUSG00000020034.8	ENSMUST00000020223.8	2725	10	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAAGACATGGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	84412497	84450211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84412877_84420611_84420920_84422967_84423104_84425747_84425869_84426951_84427173_84430511_84430649_84440370_84440553_84440749_84440932_84444328_84444502_84449345
ENSMUSG00000020038.11_0	chr10	-	3011	13	FSM	ENSMUSG00000020038.11	ENSMUST00000020227.11	3026	13	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAATCTCGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85020923	84967573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_84968172_84968914_84969023_84969105_84969178_84978879_84979033_84979502_84979706_84980017_84980170_84982207_84982520_84982599_84982741_84983770_84983860_84984477_84984663_84987076_84987220_84992949_84993059_85020177
ENSMUSG00000020042.16_1	chr10	+	3401	15	FSM	ENSMUSG00000020042.16	ENST00000420571.6	3414	15	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGACGCCCCACGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	85222760	85494209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85224343_85382305_85382456_85397368_85397574_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_11	chr10	+	3940	15	FSM	ENSMUSG00000020042.16	ENSMUST00000105306.3	3945	15	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCATCCTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85434266	85496153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85434442_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020042.16_3	chr10	+	3548	15	FSM	ENSMUSG00000020042.16	ENST00000357167.8	3568	15	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTAGAGTCTACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	85434228	85495718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_85434447_85434588_85434742_85460766_85460933_85463060_85463151_85465075_85465178_85466951_85467046_85467156_85467293_85467952_85468174_85469547_85469727_85476366_85476473_85481351_85481455_85483575_85483658_85487470_85487540_85490341_85490456_85494003
ENSMUSG00000020044.14_0	chr10	+	4705	5	FSM	ENSMUSG00000020044.14	ENSMUST00000020234.14	4722	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATACCTGCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	86136246	86185364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_86136839_86174236_86174320_86179796_86179909_86180417_86180540_86181568
ENSMUSG00000020048.14_0	chr10	-	2801	18	FSM	ENSMUSG00000020048.14	ENSMUST00000020238.14	2825	18	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	5472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATCCCAAATACTCA	NA	NA	NA	NA	NA	NA	NA	NA	86541365	86526719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_86526993_86527492_86527613_86528003_86528160_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020048.14_28	chr10	-	2588	17	FSM	ENSMUSG00000020048.14	ENST00000614327.2	2608	17	12	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTACTATTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	86541366	86526777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_86526993_86527492_86527613_86528249_86528329_86529240_86529378_86529777_86530024_86530213_86530484_86531340_86531407_86531523_86531602_86531689_86531828_86532582_86532700_86534182_86534303_86534447_86534560_86537560_86537893_86538772_86538890_86539323_86539466_86540157_86540261_86541170
ENSMUSG00000020053.19_0	chr10	+	7043	4	FSM	ENSMUSG00000020053.19	ENSMUST00000095360.11	7052	4	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTGGTTCCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	87694933	87772899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87695275_87700592_87700750_87749480_87749663_87766536
ENSMUSG00000020053.19_1	chr10	+	757	6	FSM	ENSMUSG00000020053.19	ENST00000392904.5	765	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGTTTGTTTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87694955	87766769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87695007_87695192_87695275_87700592_87700750_87749480_87749663_87751159_87751212_87766536
ENSMUSG00000020053.19_2	chr10	+	699	5	FSM	ENSMUSG00000020053.19	ENSMUST00000105300.9	1673	5	80	894	80	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGTTTGTTTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	87695199	87766769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87695275_87700592_87700750_87749480_87749663_87751159_87751212_87766536
ENSMUSG00000020053.19_3	chr10	+	1331	4	FSM	ENSMUSG00000020053.19	ENSMUST00000121161.8	1344	4	0	13	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCCAACATCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87696467	87766748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87697248_87700592_87700750_87749480_87749663_87766536
ENSMUSG00000020056.17_1	chr10	+	1033	7	FSM	ENSMUSG00000020056.17	ENSMUST00000020248.16	1052	7	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAAAATAAGAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	88036963	88082010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055111_88055223_88070255_88070321_88081617
ENSMUSG00000020056.17_4	chr10	+	826	7	FSM	ENSMUSG00000020056.17	ENSMUST00000182183.8	838	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATATGGTTTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88037022	88081865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_88037155_88037673_88037773_88049508_88049575_88051828_88051937_88055114_88055223_88070255_88070321_88081617
ENSMUSG00000020057.3_0	chr10	-	2793	7	FSM	ENSMUSG00000020057.3	ENSMUST00000020249.2	2807	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTAATTTGTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	88192930	88158672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88160648_88161195_88161289_88164944_88165004_88172672_88172851_88176381_88176525_88180505_88180574_88192653
ENSMUSG00000020057.3_1	chr10	-	919	4	FSM	ENSMUSG00000020057.3	ENST00000544152.5	936	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCAGTGCATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	88192777	88160063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88160648_88176381_88176525_88180505_88180574_88192653
ENSMUSG00000020061.19_0	chr10	-	3849	30	FSM	ENSMUSG00000020061.19	ENST00000452455.6	3869	30	12	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTCTCTTGTGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	88440877	88354146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88354432_88357138_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88373327_88373382_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88402369_88402427_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521_88421558_88440762
ENSMUSG00000020061.19_16	chr10	-	3819	28	FSM	ENSMUSG00000020061.19	ENST00000547405.5	3832	28	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTTGAAGAAAGTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88441002	88354212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88354432_88355762_88355806_88357138_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88402369_88402427_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88440762
ENSMUSG00000020061.19_18	chr10	-	1709	9	FSM	ENSMUSG00000020061.19	ENST00000549608.1	1722	9	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAGTAAAAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	88373736	88354208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88354432_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88373327
ENSMUSG00000020061.19_28	chr10	-	3331	26	ISM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	19302	8	19302	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACAGGTTCAATAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88421558	88357146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521
ENSMUSG00000020061.19_29	chr10	-	3421	27	FSM	ENSMUSG00000020061.19	ENST00000536007.5	3436	27	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACAGGTTCAATAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	88440853	88357146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88357198_88358828_88359016_88360830_88360968_88362143_88362304_88365286_88365427_88367530_88367727_88369346_88369436_88372176_88372345_88376810_88376946_88378189_88378379_88379579_88379685_88381833_88381994_88384629_88384764_88385118_88385226_88387255_88387419_88389117_88389285_88390525_88390632_88391477_88391603_88394432_88394566_88396085_88396253_88404459_88404512_88406400_88406519_88407381_88407531_88409277_88409392_88417868_88417911_88421521_88421558_88440762
ENSMUSG00000020063.17_0	chr10	-	3119	7	FSM	ENSMUSG00000020063.17	ENST00000406900.5	3126	7	2	5	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCATTGTTCATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	63167592	63154785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438_63162564_63167523
ENSMUSG00000020063.17_1	chr10	-	3074	6	FSM	ENSMUSG00000020063.17	ENST00000403579.1	3124	6	50	0	50	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTTAACTTCCATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	63162592	63154790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63162438
ENSMUSG00000020063.17_3	chr10	-	3164	7	FSM	ENSMUSG00000020063.17	ENST00000432464.5	3173	7	4	5	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCCATTGTTCATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	63172844	63154785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_63156744_63157527_63158080_63159745_63159933_63160904_63160985_63161817_63161966_63167523_63167677_63172758
ENSMUSG00000020064.10_1	chr10	+	3882	25	FSM	ENSMUSG00000020064.10	ENSMUST00000020258.10	3898	25	10	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCAGATACCAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	63079699	63153647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_63079943_63081196_63081228_63081600_63081905_63099804_63099965_63105406_63105484_63109229_63109452_63110775_63110868_63114113_63114245_63118959_63119121_63121430_63121508_63121795_63121921_63123297_63123358_63123676_63123789_63124830_63125021_63126282_63126456_63134898_63135019_63142126_63142226_63143520_63143689_63144085_63144230_63147245_63147413_63147626_63147694_63150265_63150349_63151438_63151623_63152478_63152582_63153058
ENSMUSG00000020069.17_0	chr10	-	2200	10	FSM	ENSMUSG00000020069.17	ENSMUST00000020263.14	2213	10	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGGAATGTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	62859670	62850452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853819_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020069.17_4	chr10	-	2150	10	FSM	ENSMUSG00000020069.17	ENSMUST00000118898.8	2168	10	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGGAATGTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	62859665	62850452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62851494_62851580_62851674_62851858_62851955_62852185_62852322_62853000_62853117_62853302_62853390_62853864_62854005_62854538_62854678_62855171_62855307_62859498
ENSMUSG00000020070.19_0	chr10	+	2807	13	FSM	ENSMUSG00000020070.19	ENSMUST00000131718.8	2816	13	9	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGCACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62816026	62840245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62838724
ENSMUSG00000020070.19_1	chr10	+	4117	18	FSM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATCGAAGATCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62816023	62849724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62816112_62818449_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ENSMUSG00000020070.19_6	chr10	+	4025	17	ISM	ENSMUSG00000020070.19	ENSMUST00000119567.8	4130	18	2433	10	2413	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATCGAAGATCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62818453	62849724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_62818624_62824901_62825020_62826758_62826861_62828895_62829020_62829758_62829821_62830483_62830550_62831088_62831159_62833659_62833762_62833857_62833975_62836011_62836180_62837961_62838060_62840435_62840556_62842403_62842534_62843452_62843548_62845134_62845184_62847196_62847275_62847368
ENSMUSG00000020074.8_1	chr10	-	3776	24	ISM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	1248	11	1193	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTAATTACTAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62626817	62580251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699
ENSMUSG00000020074.8_10	chr10	-	3770	24	FSM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTAATATTTTCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	62628056	62580112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUSG00000020074.8_103	chr10	-	3377	22	ISM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	1232	7	1191	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGAGATGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	62626819	62581047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62621209_62621374_62626699
ENSMUSG00000020074.8_104	chr10	-	3442	23	FSM	ENSMUSG00000020074.8	ENST00000543719.5	3449	23	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGAGATGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	62628051	62581047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62621209_62621374_62626699_62626822_62627988
ENSMUSG00000020074.8_11	chr10	-	3705	23	ISM	ENSMUSG00000020074.8	ENST00000630771.2	3771	24	1239	0	1193	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTAATATTTTCAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	62626817	62580111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699
ENSMUSG00000020074.8_52	chr10	-	3847	25	FSM	ENSMUSG00000020074.8	ENSMUST00000219527.2	3862	25	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTAATTACTAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62628061	62580251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62580602_62581041_62581248_62582679_62582866_62583122_62583244_62586325_62586473_62586715_62586796_62587521_62587634_62588952_62589193_62592261_62592454_62595872_62596059_62599218_62599303_62600102_62600314_62601045_62601213_62601720_62601835_62602335_62602562_62606633_62606796_62607714_62607845_62612346_62612540_62612627_62612743_62616219_62616414_62619012_62619046_62619661_62619707_62621209_62621374_62626699_62626822_62627994
ENSMUSG00000020075.9_0	chr10	-	4711	15	FSM	ENSMUSG00000020075.9	ENSMUST00000045866.9	4722	15	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTAGTTCTTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	62438052	62416032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62418387_62418832_62418878_62420409_62420545_62421303_62421464_62423242_62423317_62423782_62423903_62424435_62424598_62425556_62425707_62426399_62426546_62427595_62427782_62428788_62428907_62429740_62429920_62430814_62430891_62434010_62434671_62437906
ENSMUSG00000020076.8_0	chr10	-	2526	15	FSM	ENSMUSG00000020076.8	ENSMUST00000020270.6	2535	15	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTGTTAAGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	62486989	62451794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62452296_62455363_62455409_62457167_62457303_62460546_62460707_62460923_62460998_62461941_62462062_62463299_62463462_62469755_62469906_62475639_62475786_62476225_62476412_62476523_62476642_62478554_62478734_62479075_62479152_62482692_62482981_62486803
ENSMUSG00000020078.17_1	chr10	-	2576	9	FSM	ENSMUSG00000020078.17	ENSMUST00000105447.11	2597	9	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTGAAACAGAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	62322573	62291065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62292638_62294702_62294846_62299469_62299539_62300410_62300518_62304068_62304234_62305679_62305837_62306838_62306915_62316336_62316487_62322436
ENSMUSG00000020079.16_0	chr10	-	2586	15	FSM	ENSMUSG00000020079.16	ENSMUST00000020273.16	2604	15	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTTACTCATTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	62285507	62264995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62265614_62266249_62266399_62268067_62268245_62268830_62268912_62270173_62270394_62271237_62271332_62271424_62271606_62273212_62273305_62274752_62274831_62276913_62277026_62279173_62279343_62280817_62280933_62282802_62282911_62283474_62283553_62285193
ENSMUSG00000020083.14_0	chr10	-	1754	4	FSM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACCCTGCAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	61946821	61943440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61944903_61945662_61945792_61946014_61946094_61946737
ENSMUSG00000020083.14_1	chr10	-	1671	3	ISM	ENSMUSG00000020083.14	ENSMUST00000125704.8	1769	4	735	7	630	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACCCTGCAGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	61946094	61943440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_61944903_61945662_61945792_61946014
ENSMUSG00000020083.14_2	chr10	-	1096	3	FSM	ENSMUSG00000020083.14	ENSMUST00000142796.8	1135	3	37	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	61946792	61943990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61944903_61945662_61945792_61946737
ENSMUSG00000020083.14_3	chr10	-	1040	2	ISM	ENSMUSG00000020083.14	ENSMUST00000142821.8	1283	3	934	2	934	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGCCGGTGAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	61945790	61943990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_61944903_61945662
ENSMUSG00000020085.16_0	chr10	+	1484	10	FSM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	15	13	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATAAGAAAGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61551056	61574419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ENSMUSG00000020085.16_1	chr10	+	1437	10	FSM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCACGCCGATCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	61551089	61575034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ENSMUSG00000020085.16_2	chr10	+	3079	9	FSM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATAAGAAAGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61551101	61574419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61551132_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020085.16_5	chr10	+	1320	9	FSM	ENSMUSG00000020085.16	ENSMUST00000080099.6	1329	9	0	9	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAAAGACGCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	61556427	61574423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61556511_61561634_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61574177
ENSMUSG00000020085.16_6	chr10	+	1407	9	ISM	ENSMUSG00000020085.16	ENSMUST00000105455.9	1512	10	10595	13	5209	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATAAGAAAGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61561636	61574419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574177
ENSMUSG00000020085.16_7	chr10	+	1386	9	ISM	ENSMUSG00000020085.16	ENSMUST00000067857.11	1442	10	10554	5	5216	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCACGCCGATCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	61561643	61575034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361_61572538_61574806
ENSMUSG00000020085.16_8	chr10	+	3034	8	ISM	ENSMUSG00000020085.16	ENSMUST00000099706.9	3086	9	10548	7	5222	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATAAGAAAGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61561649	61574419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_61561834_61562143_61562260_61563425_61563546_61563907_61564001_61568101_61568211_61570055_61570209_61571236_61571438_61572361
ENSMUSG00000020086.7_0	chr10	-	1606	6	FSM	ENSMUSG00000020086.7	ENST00000677881.1	1626	6	9	11	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCCAGCGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61593723	61574447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61575242_61576913_61577089_61585054_61585166_61587455_61587654_61589240_61589348_61593502
ENSMUSG00000020086.7_1	chr10	-	2074	10	FSM	ENSMUSG00000020086.7	ENST00000679349.1	2083	10	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCTTTCTTATAACATA	NA	NA	NA	NA	NA	NA	NA	NA	61619706	61574438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61617670_61617785_61619561
ENSMUSG00000020086.7_2	chr10	-	2137	9	FSM	ENSMUSG00000020086.7	ENSMUST00000020283.5	2175	9	8	30	8	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAATGAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	61619918	61574473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61575242_61576913_61577089_61582411_61582502_61583450_61583551_61585054_61585166_61587455_61587654_61589240_61589348_61593502_61593734_61619561
ENSMUSG00000020087.6_0	chr10	+	2270	4	FSM	ENSMUSG00000020087.6	ENSMUST00000020284.5	2286	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTCTGTCTGTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61531303	61538547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61532522_61534076_61534208_61535221_61535408_61537812
ENSMUSG00000020087.6_1	chr10	+	1600	2	FSM	ENSMUSG00000020087.6	ENST00000335494.5	1610	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTAGTCCTTTGGCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	61531383	61538274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61532522_61537812
ENSMUSG00000020088.11_0	chr10	+	2590	7	FSM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	5232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCTAAAATGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	61516095	61529060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61516193_61520658_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020088.11_2	chr10	+	2493	6	ISM	ENSMUSG00000020088.11	ENSMUST00000020285.10	2613	7	4570	16	4570	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGCTAAAATGAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	61520658	61529060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_61520733_61520844_61520965_61521332_61521399_61522153_61522258_61525552_61525685_61527063
ENSMUSG00000020089.9_0	chr10	+	1346	11	FSM	ENSMUSG00000020089.9	ENSMUST00000020286.7	1364	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2042	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAACTTGGCTTAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	61484341	61509940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61484571_61487338_61487398_61495227_61495282_61496690_61496811_61499468_61499556_61501118_61501246_61502689_61502818_61503363_61503450_61506196_61506267_61508169_61508213_61509597
ENSMUSG00000020091.16_0	chr10	-	5762	3	FSM	ENSMUSG00000020091.16	ENSMUST00000020288.15	5784	3	14	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTGACTTGGTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	61288426	61264277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61269608_61270696_61270883_61288180
ENSMUSG00000020092.10_0	chr10	-	4258	20	FSM	ENSMUSG00000020092.10	ENSMUST00000020289.10	4282	20	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACATACTGCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61219295	61155444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61157022_61159002_61159159_61174977_61175119_61176709_61176782_61176990_61177132_61178097_61178281_61178572_61178729_61178819_61178937_61179406_61179536_61179882_61179979_61182539_61182645_61182816_61182917_61183201_61183354_61184086_61184163_61184312_61184474_61185919_61186085_61186674_61186855_61188711_61188815_61191592_61191816_61219070
ENSMUSG00000020097.15_0	chr10	-	4086	15	FSM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAATCATTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	60983416	60934429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983301
ENSMUSG00000020097.15_1	chr10	-	4056	15	FSM	ENSMUSG00000020097.15	ENSMUST00000092498.12	4070	15	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAATCATTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	60983448	60934429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036_60982111_60983363
ENSMUSG00000020097.15_3	chr10	-	3973	14	ISM	ENSMUSG00000020097.15	ENSMUST00000122259.8	4102	15	1311	9	1311	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAATCATTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	60982112	60934429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_60936788_60937459_60937581_60938346_60938494_60938899_60939139_60940241_60940392_60941200_60941300_60942043_60942150_60943355_60943445_60947940_60948070_60949216_60949294_60949788_60949937_60953473_60953542_60959087_60959254_60982036
ENSMUSG00000020099.9_1	chr10	-	5835	17	FSM	ENSMUSG00000020099.9	ENSMUST00000077925.7	5869	17	13	21	13	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAAAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	60667347	60598392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60601153_60602758_60602941_60604102_60604268_60604886_60605037_60607956_60608191_60608267_60608437_60609522_60609611_60610131_60610522_60610744_60610940_60612963_60612997_60613168_60613334_60613946_60614115_60614562_60614744_60615446_60615551_60615873_60616018_60618836_60619062_60666865
ENSMUSG00000020100.16_0	chr10	-	5233	6	FSM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCTTGGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60588561	60547857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164_60586464_60588512
ENSMUSG00000020100.16_1	chr10	-	5177	5	ISM	ENSMUSG00000020100.16	ENSMUST00000117513.8	5240	6	2105	7	2105	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGAGCTTGGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60586456	60547857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_60552270_60556639_60556803_60559542_60559770_60566348_60566432_60586164
ENSMUSG00000020100.16_2	chr10	-	3065	4	ISM	ENSMUSG00000020100.16	ENSMUST00000119595.8	3123	5	2104	3	2104	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCATCACACCAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	60586457	60549807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_60552270_60559542_60559770_60566348_60566432_60586164
ENSMUSG00000020100.16_3	chr10	-	3120	5	FSM	ENSMUSG00000020100.16	ENSMUST00000119595.8	3123	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCATCACACCAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	60588561	60549807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_60552270_60559542_60559770_60566348_60566432_60586164_60586464_60588512
ENSMUSG00000020101.15_0	chr10	+	4827	7	FSM	ENSMUSG00000020101.15	ENSMUST00000020301.14	4846	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCACCATTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	60182642	60208457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_60182883_60193620_60194047_60194722_60194774_60199979_60200088_60203544_60203573_60204307_60204505_60204680
ENSMUSG00000020101.15_1	chr10	+	4820	7	FSM	ENSMUSG00000020101.15	ENSMUST00000105460.8	4843	7	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCACCATTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	60182646	60208457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_60182883_60193620_60194047_60194722_60194774_60199979_60200088_60203544_60203573_60204310_60204505_60204680
ENSMUSG00000020102.16_0	chr10	-	2517	9	FSM	ENSMUSG00000020102.16	ENSMUST00000210780.2	2562	9	36	9	36	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATTATCATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	125225298	125063362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_125064159_125066460_125067274_125069310_125069455_125130463_125130714_125134490_125134572_125137825_125137951_125175007_125175103_125177649_125177720_125225155
ENSMUSG00000020105.10_0	chr10	+	4000	19	FSM	ENSMUSG00000020105.10	ENSMUST00000074807.8	4016	19	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATAATAGTCTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	125802132	125851223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_125802581_125807989_125808062_125808261_125808337_125830286_125830419_125831302_125831447_125832483_125832628_125832930_125833075_125833472_125833617_125834818_125834900_125835957_125836030_125838269_125838342_125838810_125838975_125842556_125842878_125844338_125844621_125845655_125846109_125846769_125846929_125848878_125849023_125849120_125849391_125850544
ENSMUSG00000020107.11_1	chr10	-	1840	4	FSM	ENSMUSG00000020107.11	ENSMUST00000182898.8	1852	4	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTCAGGAGTTGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	59838947	59823232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838777
ENSMUSG00000020107.11_2	chr10	-	1360	5	FSM	ENSMUSG00000020107.11	ENSMUST00000020307.11	1379	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCAGATCGCTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	59838921	59823736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59824661_59826654_59826730_59832269_59832437_59838239_59838290_59838777
ENSMUSG00000020107.11_4	chr10	-	543	3	FSM	ENSMUSG00000020107.11	ENSMUST00000182912.2	566	3	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAGAGTTCCAGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	59838894	59824309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59824661_59826654_59826730_59838777
ENSMUSG00000020108.5_0	chr10	-	1737	3	FSM	ENSMUSG00000020108.5	ENSMUST00000020308.5	1755	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACACTTGAGTCTCATCG	NA	NA	NA	NA	NA	NA	NA	NA	59787644	59785496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_59786852_59787138_59787395_59787518
ENSMUSG00000020109.14_0	chr10	+	3025	9	FSM	ENSMUSG00000020109.14	ENSMUST00000147914.8	3041	9	9	7	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCAGTGGTGGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59715386	59735117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732270_59733312
ENSMUSG00000020109.14_2	chr10	+	3052	9	FSM	ENSMUSG00000020109.14	ENSMUST00000146590.8	3070	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATTGGCAGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	59715408	59735112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732324_59733312
ENSMUSG00000020109.14_4	chr10	+	1481	8	FSM	ENSMUSG00000020109.14	ENSMUST00000142819.8	1495	8	7	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTTCCCAAGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59715446	59732590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171
ENSMUSG00000020109.14_5	chr10	+	2229	9	FSM	ENSMUSG00000020109.14	ENSMUST00000020309.7	2238	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCGCACCAAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	59715456	59734343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59715633_59725849_59726031_59726661_59726808_59728493_59728680_59728759_59728840_59730052_59730163_59731409_59731583_59732171_59732318_59733312
ENSMUSG00000020111.16_0	chr10	+	2423	12	FSM	ENSMUSG00000020111.16	ENSMUST00000165563.8	2442	12	11	8	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGCAAGAGCTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59538309	59699946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUSG00000020111.16_8	chr10	+	2288	13	FSM	ENSMUSG00000020111.16	ENSMUST00000092508.12	2294	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATACCCGCAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	59538449	59699939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59538510_59563778_59563941_59568804_59568980_59576481_59576645_59586325_59586370_59592527_59592540_59603959_59604075_59623762_59623846_59624700_59624899_59663010_59663149_59675496_59675606_59697384_59697475_59699000
ENSMUSG00000020114.13_0	chr10	-	7748	15	FSM	ENSMUSG00000020114.13	ENSMUST00000020315.13	7766	15	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCTAGAAATAAAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	119075952	119035169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_119039111_119042620_119042729_119043931_119044097_119044177_119044348_119045878_119045975_119046559_119048054_119048344_119048487_119049451_119049745_119051106_119051253_119052047_119052154_119052355_119052613_119053845_119053970_119055494_119055650_119063307_119063452_119075545
ENSMUSG00000020115.4_0	chr10	-	3011	21	FSM	ENSMUSG00000020115.4	ENSMUST00000020316.4	3024	21	4	9	4	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAAAAGGCTTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	121422688	121382368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484_121414626_121420100_121420247_121422599
ENSMUSG00000020115.4_11	chr10	-	2684	18	FSM	ENSMUSG00000020115.4	ENST00000652657.1	2700	18	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCAATTTTAATGTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	121414615	121382378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121383094_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_13	chr10	-	2413	16	FSM	ENSMUSG00000020115.4	ENST00000676930.1	2424	16	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCAATTTTAATGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121414621	121382379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121393106_121393209_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_47	chr10	-	2702	19	FSM	ENSMUSG00000020115.4	ENST00000677632.1	2717	19	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTACTTTAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121414618	121382420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389915_121391891_121391971_121393106_121393209_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020115.4_62	chr10	-	2216	18	FSM	ENSMUSG00000020115.4	ENST00000650762.1	2231	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCAGCCAGTGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	121414618	121382819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121383094_121387155_121387228_121387391_121387499_121388104_121388202_121388312_121388415_121388933_121388974_121389649_121389727_121389807_121389930_121391891_121391971_121395751_121395844_121396145_121396205_121397481_121397679_121399830_121400011_121403933_121404045_121406535_121406697_121407747_121407930_121412178_121412309_121414484
ENSMUSG00000020116.8_0	chr11	-	1517	7	FSM	ENSMUSG00000020116.8	ENSMUST00000020317.8	1544	7	12	15	12	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAATAACTAAAAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	17161556	17153212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_17154002_17154500_17154572_17158788_17158907_17159076_17159138_17159310_17159395_17160987_17161138_17161312
ENSMUSG00000020120.16_0	chr11	-	4081	10	FSM	ENSMUSG00000020120.16	ENSMUST00000102881.10	4101	10	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATAACTTCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	16958686	16921209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16924154_16931800_16931934_16933195_16933266_16935528_16935613_16937455_16937561_16940050_16940236_16942887_16942980_16944648_16944831_16945199_16945356_16958556
ENSMUSG00000020122.17_15	chr11	+	3386	26	FSM	ENSMUSG00000020122.17	ENST00000454757.6	3405	26	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGACAAGAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	16808904	16861848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_16809048_16810067_16810252_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860260_16860793_16860897_16861493
ENSMUSG00000020122.17_5	chr11	+	3522	27	FSM	ENSMUSG00000020122.17	ENST00000275493.7	3540	27	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGACAAGAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	16808903	16861848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_16809048_16810067_16810252_16812945_16813081_16817230_16817300_16818107_16818227_16819218_16819361_16820975_16821093_16821582_16821710_16821801_16821876_16822845_16822937_16824959_16825160_16828126_16828260_16831463_16831555_16833455_16833614_16837140_16837174_16839912_16840055_16841177_16841301_16843007_16843107_16846893_16847080_16854304_16854461_16855347_16855424_16856735_16856883_16858876_16858975_16859731_16859900_16860207_16860260_16860793_16860897_16861493
ENSMUSG00000020123.7_0	chr10	+	2639	2	FSM	ENSMUSG00000020123.7	ENSMUST00000020323.7	2670	2	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTGCTACCCATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	122284425	122289348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_122285695_122287978
ENSMUSG00000020124.11_0	chr10	-	11509	22	FSM	ENSMUSG00000020124.11	ENSMUST00000220377.2	11525	22	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGAATCGCTATATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123032891	122940917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122988945_122989033_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020124.11_8	chr10	-	4650	21	FSM	ENSMUSG00000020124.11	ENSMUST00000020334.9	4666	21	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGTCTTTTATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	123032842	122947640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_122949593_122955013_122955103_122957476_122957581_122959840_122959991_122960418_122960535_122960868_122960940_122961317_122961591_122961716_122961833_122963582_122963775_122963868_122963964_122964053_122964138_122966845_122967071_122967156_122967316_122968860_122969035_122982698_122982844_122999497_122999560_123004131_123004278_123007004_123007132_123011747_123011879_123017577_123017706_123032731
ENSMUSG00000020128.16_0	chr11	+	4246	23	FSM	ENSMUSG00000020128.16	ENSMUST00000109578.8	4273	23	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGTACAAAAACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	21189290	21271105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_21189372_21213198_21213355_21214665_21214872_21218784_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21242023_21242132_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020128.16_10	chr11	+	2891	18	ISM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	2920	1	2920	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21221702	21270379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020128.16_4	chr11	+	2967	19	FSM	ENSMUSG00000020128.16	ENST00000354504.7	2972	19	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGGAATTCAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21218786	21270379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_21218864_21221703_21221739_21224997_21225130_21227674_21228061_21241032_21241160_21245340_21245397_21248753_21248851_21249977_21250319_21255650_21255781_21256365_21256548_21256908_21257022_21258738_21258803_21261076_21261183_21262239_21262328_21262850_21262973_21263083_21263165_21264918_21265027_21266791_21266887_21269752
ENSMUSG00000020130.10_0	chr10	-	3737	17	FSM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAATACGCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115087365	115033784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ENSMUSG00000020130.10_1	chr10	-	3660	16	ISM	ENSMUSG00000020130.10	ENSMUST00000020339.10	3752	17	10518	8	10518	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAATACGCATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115076854	115033784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753
ENSMUSG00000020130.10_11	chr10	-	3232	18	FSM	ENSMUSG00000020130.10	ENST00000550746.5	3259	18	18	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGAAACGGCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115087363	115034338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115035670_115038408_115038496_115039022_115039140_115044801_115044900_115045461_115045562_115046100_115046202_115048595_115048713_115053466_115053562_115054455_115054560_115055056_115055186_115056115_115056314_115056592_115056644_115057487_115057591_115065029_115065241_115069024_115069164_115075176_115075252_115076753_115076853_115087286
ENSMUSG00000020131.15_0	chr10	-	2520	15	FSM	ENSMUSG00000020131.15	ENSMUST00000020340.15	2539	15	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTTAAACAGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	80165328	80157131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80157786_80157914_80158044_80158557_80158683_80158823_80159010_80159316_80159435_80159506_80159611_80159687_80159789_80160765_80160979_80161066_80161240_80161416_80161506_80161606_80161684_80161783_80161913_80161993_80162087_80164779_80164885_80165104
ENSMUSG00000020132.11_0	chr10	-	4562	7	FSM	ENSMUSG00000020132.11	ENSMUST00000020343.9	4602	7	18	22	18	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAAAAAAGCAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	115151478	115123010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115126817_115130775_115130865_115131333_115131389_115134732_115134797_115137427_115137536_115138636_115138697_115151098
ENSMUSG00000020133.9_0	chr10	-	1631	2	FSM	ENSMUSG00000020133.9	ENSMUST00000020341.9	1649	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCGATGGAGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	80156362	80154096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80155382_80156016
ENSMUSG00000020134.14_0	chr11	+	3495	7	FSM	ENSMUSG00000020134.14	ENSMUST00000093290.12	3514	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCTATGCGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	21041303	21100317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_21041679_21086045_21086186_21090563_21090694_21092555_21092658_21096914_21097113_21097257_21097447_21097956
ENSMUSG00000020135.14_3	chr10	+	6916	14	FSM	ENSMUSG00000020135.14	ENST00000233607.6	6928	14	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAATGCTCTGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	80137668	80151929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80137813_80137970_80138062_80138147_80138329_80140529_80140639_80140737_80140855_80141018_80141097_80141362_80141462_80141967_80142356_80142962_80143059_80143270_80143411_80143765_80143844_80144047_80144165_80144794_80145010_80146866
ENSMUSG00000020137.6_0	chr10	-	4959	3	FSM	ENSMUSG00000020137.6	ENSMUST00000218842.2	4970	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAATTTTTGTCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	115220329	115204308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115208852_115212256_115212453_115220109
ENSMUSG00000020137.6_2	chr10	-	3662	2	FSM	ENSMUSG00000020137.6	ENSMUST00000020346.6	3681	2	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAGCAAAACGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	115220309	115205389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115208852_115220109
ENSMUSG00000020137.6_3	chr10	-	209	2	FSM	ENSMUSG00000020137.6	ENST00000547843.1	228	2	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTCACACATGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	115220196	115219669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115219792_115220109
ENSMUSG00000020142.13_0	chr11	-	3908	8	FSM	ENSMUSG00000020142.13	ENSMUST00000109594.8	3926	8	18	0	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCCTGTCTTTGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	20282695	20252179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20258403_20258638_20263915_20264083_20268659_20268723_20270191_20270235_20281945
ENSMUSG00000020142.13_1	chr11	-	940	5	ISM	ENSMUSG00000020142.13	ENST00000531327.5	989	6	1516	2	1516	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCCTCCTGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	20268719	20254117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20254501_20256465_20256601_20257891_20258087_20263915_20264083_20268659
ENSMUSG00000020142.13_2	chr11	-	987	6	FSM	ENSMUSG00000020142.13	ENST00000531327.5	989	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCCTCCTGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	20270235	20254117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20254501_20256465_20256601_20257891_20258087_20263915_20264083_20268659_20268723_20270191
ENSMUSG00000020142.13_3	chr11	-	878	4	ISM	ENSMUSG00000020142.13	ENST00000531327.5	989	6	6151	6	6151	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGAATGCCTCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	20264084	20254121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20254501_20256465_20256601_20257891_20258087_20263915
ENSMUSG00000020149.18_0	chr11	+	2810	6	FSM	ENSMUSG00000020149.18	ENSMUST00000020358.12	2827	6	11	6	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAGATGCGCTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	20151442	20176850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_20151653_20165629_20165703_20168812_20168909_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020149.18_3	chr11	+	1312	5	FSM	ENSMUSG00000020149.18	ENST00000409751.1	1335	5	10	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATATCAAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	20151445	20175451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_20151653_20165629_20165703_20173083_20173180_20174366_20174499_20174647
ENSMUSG00000020150.14_0	chr10	-	965	6	FSM	ENSMUSG00000020150.14	ENSMUST00000105363.8	988	6	10	13	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGAAGACTAGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80096836	80093997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80094292_80094773_80094885_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUSG00000020150.14_4	chr10	-	970	6	FSM	ENSMUSG00000020150.14	ENSMUST00000020359.7	979	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGCTAACAAGAAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	80096800	80094004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80094292_80094773_80094933_80095010_80095079_80095434_80095499_80095601_80095748_80096554
ENSMUSG00000020152.8_0	chr11	-	3615	9	FSM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATTTGAATTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20062904	20012310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822_20050934_20062804
ENSMUSG00000020152.8_2	chr11	-	3516	8	ISM	ENSMUSG00000020152.8	ENSMUST00000000137.8	3631	9	11979	7	11938	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATTTGAATTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20050934	20012310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20050822
ENSMUSG00000020152.8_6	chr11	-	1937	10	FSM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	1	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAGCAAGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20062871	20013970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20048736_20048752_20050822_20050934_20062804
ENSMUSG00000020152.8_7	chr11	-	1867	9	ISM	ENSMUSG00000020152.8	ENST00000377982.8	1952	10	11942	14	11942	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAAAGCAAGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20050930	20013970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20014860_20022455_20022589_20027187_20027334_20030022_20030173_20030661_20030799_20041294_20041368_20044229_20044446_20048736_20048752_20050822
ENSMUSG00000020153.15_0	chr10	+	974	9	FSM	ENSMUSG00000020153.15	ENSMUST00000105364.8	983	9	4	5	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTTGTGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80084958	80092622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80085039_80085145_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_13	chr10	+	715	7	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	2944	4	2944	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTTGTGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80088229	80092622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_16	chr10	+	676	6	ISM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	3623	4	3623	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTTGTGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80088908	80092622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020153.15_7	chr10	+	754	8	FSM	ENSMUSG00000020153.15	ENSMUST00000020361.7	758	8	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCAGTTGTGTGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80085285	80092622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80085326_80088230_80088268_80088907_80088992_80089493_80089618_80090673_80090854_80090923_80090971_80091757_80091847_80092469
ENSMUSG00000020154.11_0	chr10	+	11877	32	FSM	ENSMUSG00000020154.11	ENSMUST00000092167.7	11911	32	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAAGAGTGTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	116137303	116225433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116137585_116138012_116138287_116149718_116149998_116150946_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116177284_116177555_116179697_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198333_116198428_116198447_116198548_116198631_116199183_116199275_116199879_116199957_116203385_116203521_116204597_116204721_116205200_116205365_116208745_116208882_116216736_116216858_116219757
ENSMUSG00000020154.11_1	chr10	+	5618	28	FSM	ENSMUSG00000020154.11	ENST00000538708.5	5639	28	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAGAGGTAAGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	116138021	116216848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116138287_116149718_116149998_116150946_116151205_116153270_116153535_116155237_116155508_116158329_116158591_116163854_116164122_116167113_116167378_116174520_116174785_116175322_116175587_116176795_116177060_116179697_116179962_116182703_116182968_116183831_116184114_116185870_116186150_116186670_116186821_116189695_116189940_116193096_116193204_116197112_116197213_116198248_116198337_116198548_116198631_116199183_116199275_116199879_116199957_116203385_116203521_116204597_116204721_116205200_116205365_116208745_116208882_116216736
ENSMUSG00000020155.3_0	chr11	+	4171	4	FSM	ENSMUSG00000020155.3	ENSMUST00000020362.3	4191	4	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAATGAAACGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	33913019	33923628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_33913327_33914676_33914835_33916189_33916362_33920094
ENSMUSG00000020156.17_0	chr10	+	2618	14	FSM	ENSMUSG00000020156.17	ENSMUST00000020365.15	2640	14	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATATGTGTCATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	80062281	80079729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80062539_80064155_80064273_80064828_80064915_80065890_80065962_80068071_80068882_80070056_80070162_80071944_80072016_80074148_80074226_80074693_80074755_80075753_80075830_80076225_80076277_80076597_80077035_80077630_80077720_80079419
ENSMUSG00000020156.17_14	chr10	+	998	8	FSM	ENSMUSG00000020156.17	ENST00000591337.7	1017	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTACATTCGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	80062532	80077685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80062641_80064155_80064230_80071944_80072016_80074148_80074275_80075753_80075830_80076225_80076277_80076597_80077035_80077630
ENSMUSG00000020159.9_0	chr11	-	1075	7	FSM	ENSMUSG00000020159.9	ENST00000519385.5	1085	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGCCATTGAACTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	33522485	33502540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_33502843_33504967_33505121_33506929_33507068_33513865_33513949_33517212_33517431_33518066_33518135_33522372
ENSMUSG00000020160.19_0	chr11	-	4546	14	FSM	ENSMUSG00000020160.19	ENST00000272369.14	4564	14	11	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTAACCGTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	18968955	18829162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_18829345_18829490_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18966132_18966360_18968220
ENSMUSG00000020160.19_11	chr11	-	2741	12	FSM	ENSMUSG00000020160.19	ENST00000495021.6	2750	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATCTTAGCATTTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	18964872	18830466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_18831923_18833987_18834083_18834386_18834477_18835592_18835652_18855688_18855766_18891658_18891805_18938267_18938380_18961241_18961389_18962809_18962861_18963631_18963683_18964249_18964392_18964557
ENSMUSG00000020163.13_0	chr10	-	432	3	FSM	ENSMUSG00000020163.13	ENSMUST00000020372.6	445	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCTGGCTCCTTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	80242652	80238831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80238990_80239969_80240121_80242529
ENSMUSG00000020166.16_0	chr10	-	2613	14	FSM	ENSMUSG00000020166.16	ENSMUST00000164088.8	2618	14	4	1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	116385064	116321070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937
ENSMUSG00000020166.16_1	chr10	-	2686	15	FSM	ENSMUSG00000020166.16	ENSMUST00000168036.8	2693	15	2	5	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	116417414	116321070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116384937_116385081_116417357
ENSMUSG00000020166.16_15	chr10	-	2119	16	FSM	ENSMUSG00000020166.16	ENSMUST00000169921.8	2120	16	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATGTGAAGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	116417416	116321692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385011_116417357
ENSMUSG00000020166.16_4	chr10	-	2800	16	FSM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	116417405	116321070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937_116385081_116417357
ENSMUSG00000020166.16_5	chr10	-	2745	15	ISM	ENSMUSG00000020166.16	ENSMUST00000105267.8	2800	16	32332	0	-5	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGTGTTGGCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	116385073	116321070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_116322192_116328196_116328342_116329597_116329699_116330727_116330778_116330864_116330927_116333990_116334148_116334242_116334364_116335246_116335372_116337096_116337223_116339939_116340020_116342133_116342317_116342945_116343094_116353221_116353289_116363731_116363855_116384937
ENSMUSG00000020167.15_0	chr10	-	2936	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105345.10	2950	19	8	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTACCCTGAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80269473	80245353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUSG00000020167.15_1	chr10	-	2927	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105344.8	2946	19	13	6	-3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTACCCTGAGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	80269458	80245353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUSG00000020167.15_10	chr10	-	2906	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105343.8	2920	19	7	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCAAAAGACCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80269474	80245387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251355_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUSG00000020167.15_11	chr10	-	2911	19	FSM	ENSMUSG00000020167.15	ENSMUST00000105342.8	2928	19	10	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCAAAAGACCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80269467	80245387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80246109_80248660_80248897_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254653_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266903_80269153
ENSMUSG00000020167.15_22	chr10	-	2596	20	FSM	ENSMUSG00000020167.15	ENST00000588136.7	2611	20	9	6	-2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTTTCTGTTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	80269465	80245448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80245758_80245965_80246109_80246231_80246459_80249038_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80256921_80257001_80257165_80257240_80263504_80263578_80266770_80266871_80269153
ENSMUSG00000020167.15_53	chr10	-	2127	15	FSM	ENSMUSG00000020167.15	ENST00000395423.7	2140	15	11	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCAGTGGGCGGCCCGCG	NA	NA	NA	NA	NA	NA	NA	NA	80269452	80248662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80249172_80250995_80251123_80251198_80251358_80251686_80251761_80252393_80252473_80252564_80252624_80252923_80253060_80253146_80253305_80253371_80253475_80254599_80254650_80255300_80255434_80255854_80255923_80263504_80263578_80266770_80266871_80269153
ENSMUSG00000020169.5_0	chr10	+	1164	3	FSM	ENSMUSG00000020169.5	ENST00000266661.8	1177	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAGGGTTGCTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	116822481	116837790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116822718_116828968_116829203_116837096
ENSMUSG00000020169.5_4	chr10	+	1876	6	FSM	ENSMUSG00000020169.5	ENST00000488961.5	1887	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACAAAGTGTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	116832316	116861055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116832513_116838424_116838580_116839789_116839868_116843492_116843574_116844794_116844947_116859841
ENSMUSG00000020170.5_0	chr10	-	6399	10	FSM	ENSMUSG00000020170.5	ENSMUST00000020381.5	6420	10	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTACGTAAAGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	116984399	116905336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116910785_116912715_116912880_116913416_116913576_116914664_116914852_116916926_116917019_116920936_116921029_116935847_116935873_116936530_116936574_116938017_116938104_116984296
ENSMUSG00000020171.9_0	chr10	-	1313	7	FSM	ENSMUSG00000020171.9	ENSMUST00000020382.8	1327	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCCTGTGTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	117060403	117051131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117056237_117056333_117056436_117056504_117058078_117058199_117060163
ENSMUSG00000020171.9_10	chr10	-	568	5	FSM	ENSMUSG00000020171.9	ENST00000548020.5	587	5	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGAAAGACATTTGAGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	117060275	117051586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117051742_117053116_117053205_117053333_117053427_117058078_117058199_117060163
ENSMUSG00000020173.18_0	chr11	-	5603	15	FSM	ENSMUSG00000020173.18	ENSMUST00000046755.14	5615	15	10	2	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	12414947	12186677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12315104_12315180_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020173.18_1	chr11	-	5239	13	FSM	ENSMUSG00000020173.18	ENSMUST00000109650.8	5271	13	22	10	-15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTAACTGTCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12414837	12186685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020173.18_3	chr11	-	5539	14	FSM	ENSMUSG00000020173.18	ENSMUST00000109651.9	5541	14	2	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTCGTGTGGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	12414958	12186677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_12188060_12199649_12199914_12201022_12201143_12203088_12204972_12206144_12206243_12216855_12217145_12256957_12257129_12259613_12259753_12293743_12293918_12319593_12319692_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020173.18_8	chr11	-	907	6	FSM	ENSMUSG00000020173.18	ENST00000632460.1	929	6	12	10	-6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTAAGGTAAGTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	12414810	12319602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_12319692_12323328_12323374_12325809_12326039_12328148_12328360_12336562_12336767_12414681
ENSMUSG00000020175.16_0	chr10	+	3282	11	FSM	ENSMUSG00000020175.16	ENSMUST00000234625.2	2620	11	-15	-647	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGTGTGATGAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	74872905	74890579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_74873154_74874271_74874353_74877671_74877764_74880302_74880369_74881863_74881966_74884280_74884346_74885727_74885784_74886473_74886552_74886821_74886913_74887749_74887876_74888302
ENSMUSG00000020175.16_2	chr10	+	2942	10	ISM	ENSMUSG00000020175.16	ENSMUST00000234625.2	2620	11	757	39	10	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGATTCAATGTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	74873677	74889893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_74874353_74877671_74877764_74880302_74880369_74881863_74881966_74884280_74884346_74885727_74885784_74886473_74886552_74886821_74886913_74887749_74887876_74888302
ENSMUSG00000020180.11_0	chr10	+	3018	4	FSM	ENSMUSG00000020180.11	ENSMUST00000020397.11	3036	4	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAAGTTTGTTTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	75353392	75373205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75353960_75355147_75355295_75368010_75368204_75371094
ENSMUSG00000020181.19_0	chr10	-	10225	41	FSM	ENSMUSG00000020181.19	ENST00000397909.7	10242	41	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACAACAAGGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	109836760	109517444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_109520101_109524646_109524851_109527904_109528024_109528900_109529098_109529878_109529951_109532048_109532204_109539165_109539402_109540630_109540800_109541432_109541529_109543720_109543819_109550093_109550269_109552380_109552535_109553697_109553764_109554054_109554228_109554926_109554948_109555817_109555940_109563691_109563804_109572779_109572864_109578461_109578540_109583054_109583079_109587292_109587346_109590810_109591000_109594749_109594911_109596347_109596390_109600378_109600868_109602789_109603499_109605022_109605300_109606052_109606186_109652114_109652235_109659096_109659481_109660433_109660538_109677559_109677680_109688365_109689396_109699612_109699753_109702791_109702861_109716395_109716580_109719474_109719548_109738922_109738976_109739606_109739725_109835837_109836206_109836362
ENSMUSG00000020181.19_35	chr10	-	7329	39	FSM	ENSMUSG00000020181.19	ENST00000536525.6	7346	39	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTGGTGTCCACGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	109836195	109519866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_109520101_109524646_109524851_109527904_109528024_109528900_109529098_109529878_109529951_109532048_109532204_109539165_109539402_109540630_109540800_109541432_109541529_109543720_109543819_109550093_109550269_109552380_109552535_109554054_109554228_109554926_109554948_109555817_109555940_109563691_109563804_109572779_109572864_109578461_109578540_109583054_109583079_109587292_109587346_109590810_109591000_109594749_109594911_109596347_109596390_109600378_109600868_109602789_109603499_109605022_109605300_109606052_109606186_109652114_109652235_109659096_109659481_109660433_109660538_109677559_109677680_109688365_109689396_109699612_109699753_109702791_109702861_109716395_109716580_109719474_109719548_109738922_109738976_109739606_109739725_109835837
ENSMUSG00000020182.17_3	chr11	-	968	9	FSM	ENSMUSG00000020182.17	ENST00000431062.5	989	9	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACCAGAAACCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	11823243	11764409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11823133
ENSMUSG00000020182.17_4	chr11	-	1107	10	FSM	ENSMUSG00000020182.17	ENST00000617822.4	1124	10	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACCAGAAACCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	11823247	11764409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11814893_11815029_11823133
ENSMUSG00000020182.17_5	chr11	-	1250	11	FSM	ENSMUSG00000020182.17	ENST00000357936.9	1268	11	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACCAGAAACCTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	11823246	11764409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11764518_11765210_11765429_11769290_11769393_11772194_11772294_11779077_11779179_11785741_11785810_11789397_11789493_11796635_11796703_11813650_11813795_11814893_11815029_11823133
ENSMUSG00000020184.16_0	chr10	-	3081	12	FSM	ENSMUSG00000020184.16	ENSMUST00000020408.16	3099	12	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTTTTGTCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	117546650	117524784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117530809_117530974_117531857_117531955_117532285_117532345_117537469_117537520_117538106_117538241_117541059_117541135_117545604_117545690_117545850_117545934_117546456
ENSMUSG00000020184.16_16	chr10	-	723	3	FSM	ENSMUSG00000020184.16	ENST00000393410.5	726	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTGACCTGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	117545682	117526120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117526691_117541059_117541135_117545604
ENSMUSG00000020184.16_24	chr10	-	644	2	ISM	ENSMUSG00000020184.16	ENST00000393410.5	726	3	4552	0	4552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGCTGACCTGCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	117541133	117526120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_117526691_117541059
ENSMUSG00000020184.16_29	chr10	-	373	3	FSM	ENSMUSG00000020184.16	ENST00000517852.5	384	3	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTAGCTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117545679	117526125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117526349_117541059_117541135_117545604
ENSMUSG00000020184.16_31	chr10	-	949	5	FSM	ENSMUSG00000020184.16	ENST00000299252.8	960	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTAGCTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117545679	117526125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117526691_117527049_117527128_117528486_117528643_117541059_117541135_117545604
ENSMUSG00000020184.16_35	chr10	-	642	2	FSM	ENSMUSG00000020184.16	ENST00000393413.7	651	2	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAACTAGCTGACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117545681	117526125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117526691_117545604
ENSMUSG00000020185.17_0	chr10	+	2851	3	FSM	ENSMUSG00000020185.17	ENSMUST00000174857.8	2865	3	14	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCGTTTTCTTTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110581339	110592498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110581541_110582192_110582286_110589941
ENSMUSG00000020185.17_1	chr10	+	5449	13	FSM	ENSMUSG00000020185.17	ENSMUST00000073781.12	5473	13	18	6	18	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTATATTACTTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110581346	110623239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110581541_110582192_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ENSMUSG00000020185.17_2	chr10	+	3559	13	FSM	ENSMUSG00000020185.17	ENSMUST00000173471.8	3567	13	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCTGGAGTTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	110581374	110621364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110581541_110582179_110582286_110589941_110590221_110595678_110595848_110599787_110600079_110601476_110601636_110602977_110603113_110610502_110610689_110611179_110611250_110614679_110615164_110616627_110616884_110618058_110618481_110620528
ENSMUSG00000020186.8_0	chr10	+	1376	6	FSM	ENSMUSG00000020186.8	ENSMUST00000020403.7	1384	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACAATCAATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	110755657	110775483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497_110774592_110775071
ENSMUSG00000020186.8_5	chr10	+	768	5	FSM	ENSMUSG00000020186.8	ENSMUST00000220409.2	780	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCAGCACGGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	110756055	110774793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110756116_110767815_110767929_110771008_110771178_110773597_110773728_110774497
ENSMUSG00000020189.16_0	chr10	+	7171	24	FSM	ENSMUSG00000020189.16	ENSMUST00000105275.9	7204	24	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGCAATCTGTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	111000635	111133100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111001058_111040595_111040702_111060532_111060570_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ENSMUSG00000020189.16_4	chr10	+	3609	23	FSM	ENSMUSG00000020189.16	ENSMUST00000095310.3	3622	23	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATACACCAAGAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	111000666	111129606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111001058_111040595_111040702_111069413_111069552_111091548_111091620_111099040_111099119_111101395_111101498_111103465_111103670_111105218_111105304_111106351_111106524_111107934_111108173_111108886_111109072_111110851_111110934_111112320_111112420_111113107_111113205_111116150_111116250_111117987_111118086_111120190_111120281_111121976_111122114_111123687_111123874_111124553_111124642_111125649_111125756_111127351_111127455_111128952
ENSMUSG00000020190.14_0	chr10	-	3006	11	ISM	ENSMUSG00000020190.14	ENSMUST00000003433.11	3065	12	145	4	145	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAATTTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80507665	80501169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569
ENSMUSG00000020190.14_1	chr10	-	3412	14	FSM	ENSMUSG00000020190.14	ENSMUST00000200082.5	3439	14	18	9	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAATTTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80512109	80501169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761_80507850_80511657_80511775_80511914
ENSMUSG00000020190.14_2	chr10	-	3061	12	FSM	ENSMUSG00000020190.14	ENSMUST00000003433.11	3065	12	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAATTTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	80507810	80501169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80503167_80503446_80503491_80503799_80503965_80504355_80504551_80504778_80504875_80504988_80505045_80505131_80505237_80505463_80505538_80505729_80505810_80507392_80507491_80507569_80507672_80507761
ENSMUSG00000020196.11_0	chr10	-	7402	37	FSM	ENSMUSG00000020196.11	ENSMUST00000001712.8	7417	37	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATAGTCTCTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75600142	75481952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75482522_75482708_75482936_75483890_75484056_75488708_75488977_75491199_75491275_75492608_75493287_75493629_75493727_75494467_75494632_75520125_75520240_75530548_75530881_75535746_75535930_75549286_75549466_75551432_75551585_75553271_75553533_75557111_75557374_75561092_75561239_75561382_75561590_75562691_75562854_75568233_75568350_75569453_75569611_75570799_75571043_75573154_75573350_75574044_75574198_75575159_75575348_75575853_75575933_75578078_75578297_75579035_75579173_75581062_75581232_75582321_75582609_75583659_75583810_75585877_75586008_75587269_75587451_75589210_75589346_75590084_75590199_75590645_75590739_75591202_75591335_75599858
ENSMUSG00000020198.9_0	chr10	-	4779	31	FSM	ENSMUSG00000020198.9	ENSMUST00000020420.9	4805	31	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGTCAAAAAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	80578088	80542805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80543818_80544291_80544372_80544580_80544703_80545034_80545121_80545233_80545323_80545600_80545791_80546253_80546302_80546522_80546667_80547945_80548042_80548429_80548502_80548598_80548765_80549390_80549465_80549806_80549995_80550080_80550157_80550941_80551014_80551704_80551847_80552307_80552454_80553532_80553765_80554842_80555223_80555500_80555647_80556953_80557003_80557424_80557475_80558746_80558797_80559366_80559441_80559524_80559665_80562887_80563018_80563715_80563824_80565811_80565893_80566707_80566789_80568684_80568781_80577729
ENSMUSG00000020205.9_0	chr10	+	1937	2	FSM	ENSMUSG00000020205.9	ENSMUST00000164773.2	1949	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTTTCTAAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	111342151	111344499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111343510_111343920
ENSMUSG00000020211.16_0	chr10	+	2206	9	FSM	ENSMUSG00000020211.16	ENSMUST00000148665.8	2213	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTGCTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	80634038	80640758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80634640_80637029_80637193_80637289_80637362_80638231_80638279_80638625_80638736_80639293_80639344_80639416_80639558_80639653_80639723_80639805
ENSMUSG00000020212.15_0	chr10	+	3052	14	FSM	ENSMUSG00000020212.15	ENSMUST00000020437.13	3074	14	7	15	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAAACACCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	117977743	118004887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000020212.15_11	chr10	+	1254	2	ISM	ENSMUSG00000020212.15	ENSMUST00000219087.2	1318	3	946	5	915	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTATTTTTTTGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	117978764	117983648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_117978870_117982499
ENSMUSG00000020212.15_12	chr10	+	2863	12	ISM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	930	16	909	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTTAAACACCAACT	NA	NA	NA	NA	NA	NA	NA	NA	117978758	118004886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ENSMUSG00000020212.15_13	chr10	+	1978	13	ISM	ENSMUSG00000020212.15	ENSMUST00000169817.3	2022	14	922	9	922	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCATAAACCTCTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	117978771	118004059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_117978870_117982499_117982877_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000020212.15_6	chr10	+	2457	15	FSM	ENSMUSG00000020212.15	ENSMUST00000163238.9	2461	15	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTCACACACTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	117977766	118004285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117992738_117992769_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118002529_118002590_118003955
ENSMUSG00000020212.15_8	chr10	+	1307	3	FSM	ENSMUSG00000020212.15	ENSMUST00000219087.2	1318	3	6	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTATTTTTTTGAGATGC	NA	NA	NA	NA	NA	NA	NA	NA	117977824	117983648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_117977868_117978754_117978870_117982499
ENSMUSG00000020212.15_9	chr10	+	2915	13	FSM	ENSMUSG00000020212.15	ENSMUST00000164077.9	2922	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCAACTTGATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	117977828	118004895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_117977868_117978754_117978870_117982499_117982877_117983885_117984021_117986693_117986862_117987906_117988002_117988079_117988180_117993099_117993276_117994206_117994510_117995351_117995462_117995564_117995675_118000105_118000353_118003955
ENSMUSG00000020216.14_0	chr10	-	1060	6	ISM	ENSMUSG00000020216.14	ENSMUST00000181039.8	1108	7	1088	5	-519	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAGATCATCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80648238	80644336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647900_80647939_80648128
ENSMUSG00000020216.14_1	chr10	-	1103	7	FSM	ENSMUSG00000020216.14	ENSMUST00000181039.8	1108	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAGATCATCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80649326	80644336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647900_80647939_80648128_80648252_80649296
ENSMUSG00000020216.14_2	chr10	-	901	4	ISM	ENSMUSG00000020216.14	ENSMUST00000020435.11	955	5	1330	7	1330	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAGATCATCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80646389	80644336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297
ENSMUSG00000020216.14_3	chr10	-	948	5	FSM	ENSMUSG00000020216.14	ENSMUST00000020435.11	955	5	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAGATCATCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80647719	80644336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80644874_80644979_80645063_80646009_80646199_80646297_80646401_80647683
ENSMUSG00000020219.8_0	chr10	-	1208	3	FSM	ENSMUSG00000020219.8	ENSMUST00000020440.7	1225	3	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTAGTTCCCATCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	80736791	80735288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80736094_80736315_80736385_80736457
ENSMUSG00000020219.8_1	chr10	-	516	3	FSM	ENSMUSG00000020219.8	ENSMUST00000219896.2	542	3	18	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGCGTGTCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	80736601	80735745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80736094_80736315_80736385_80736502
ENSMUSG00000020220.17_0	chr4	-	15841	70	FSM	ENSMUSG00000020220.17	ENSMUST00000036579.14	15849	70	5	3	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTGGTTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	144921570	144699194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144830183_144830259_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065_144917237_144921488
ENSMUSG00000020220.17_10	chr4	-	13571	68	FSM	ENSMUSG00000020220.17	ENST00000613099.4	13586	68	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGCACGCCTCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	144917220	144701291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065
ENSMUSG00000020220.17_3	chr4	-	15759	69	ISM	ENSMUSG00000020220.17	ENSMUST00000036579.14	15849	70	4339	3	0	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTGGTTTCTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	144917236	144699194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144830183_144830259_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904666_144904758_144904950_144907685_144907764_144917065
ENSMUSG00000020220.17_5	chr4	-	15616	68	FSM	ENSMUSG00000020220.17	ENSMUST00000020441.13	15665	68	43	6	36	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTACAGGTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	144917193	144699201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_144701839_144703097_144703339_144709887_144710020_144743304_144743501_144746706_144746840_144771530_144771699_144772840_144772976_144780686_144780836_144783039_144783137_144783982_144784133_144789074_144789225_144790133_144790251_144792355_144792536_144795647_144795757_144796514_144796679_144798955_144799065_144801405_144801642_144802279_144802404_144807870_144808047_144808250_144808382_144811861_144812005_144813273_144813401_144813694_144813887_144814760_144815009_144818431_144818643_144818774_144818926_144821393_144821442_144822755_144822892_144824580_144824734_144826534_144826641_144832368_144832492_144833499_144833641_144835074_144835165_144837401_144837612_144841276_144841352_144842002_144842214_144844118_144844275_144847821_144847956_144849013_144849277_144852979_144853193_144854506_144854620_144854814_144854987_144858169_144858381_144861007_144861231_144865133_144865317_144867812_144867994_144869741_144869869_144871360_144871452_144874886_144875919_144879216_144879369_144881138_144883353_144887154_144887288_144888567_144888699_144889745_144889917_144890325_144890402_144891125_144891257_144893960_144894141_144894685_144894888_144895045_144895148_144896805_144896975_144898214_144898316_144898647_144898819_144899623_144899729_144901378_144901496_144904581_144904648_144904758_144904950_144907685_144907764_144917065
ENSMUSG00000020224.16_0	chr10	+	1661	3	FSM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCATTCTCAGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	120062974	120068484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_120063029_120063878_120064109_120067107
ENSMUSG00000020224.16_1	chr10	+	1438	3	FSM	ENSMUSG00000020224.16	ENSMUST00000130198.3	1463	3	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTTGGAGTTTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	120063114	120067975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_120063455_120063878_120064109_120067107
ENSMUSG00000020224.16_2	chr10	+	1597	2	ISM	ENSMUSG00000020224.16	ENSMUST00000020444.16	1664	3	914	3	798	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGCATTCTCAGAATCG	NA	NA	NA	NA	NA	NA	NA	NA	120063888	120068484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_120064109_120067107
ENSMUSG00000020225.11_0	chr10	+	888	7	FSM	ENSMUSG00000020225.11	ENSMUST00000020446.11	904	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCATTCTGTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	120044663	120060815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_120044848_120051445_120051555_120053408_120053515_120056655_120056690_120057910_120058029_120059741_120059788_120060524
ENSMUSG00000020227.11_0	chr10	-	3060	12	FSM	ENSMUSG00000020227.11	ENSMUST00000020448.11	3097	12	31	6	31	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGTTGTTTTGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	120037533	119977558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_119979097_119981550_119981716_119981802_119981866_119982335_119982535_120000997_120001117_120002309_120002425_120006222_120006288_120012135_120012288_120013972_120014028_120014600_120014705_120018430_120018614_120037231
ENSMUSG00000020228.12_0	chr10	-	4525	13	FSM	ENSMUSG00000020228.12	ENSMUST00000020449.12	4554	13	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATCGCCCAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119948870	119919519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_119920879_119925312_119925781_119927513_119927658_119928388_119928594_119930131_119930192_119931005_119931097_119934086_119934242_119937302_119937445_119938674_119938850_119941063_119941943_119944790_119944961_119946737_119947134_119948589
ENSMUSG00000020230.16_0	chr10	-	2025	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099571.10	2052	11	15	12	-13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAACAAATTCATTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	76073684	76043067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072659_76073583
ENSMUSG00000020230.16_3	chr10	-	2002	11	FSM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	5	9	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAACAAATTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76073666	76043069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
ENSMUSG00000020230.16_4	chr10	-	1921	10	ISM	ENSMUSG00000020230.16	ENSMUST00000020452.12	2016	11	1014	9	1013	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAACAAATTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76072657	76043069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_76043628_76044245_76044418_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545
ENSMUSG00000020230.16_6	chr10	-	2088	11	FSM	ENSMUSG00000020230.16	ENSMUST00000099572.10	2100	11	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAACAAATTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76073662	76043069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76043628_76044245_76044508_76045171_76045309_76046231_76046362_76053147_76053324_76056831_76056997_76058282_76058445_76061121_76061305_76062023_76062150_76072545_76072656_76073583
ENSMUSG00000020231.16_0	chr10	-	6547	37	FSM	ENSMUSG00000020231.16	ENSMUST00000160048.8	6551	37	3	1	3	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACATTCTTTACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	76181122	76098570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140849_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76163535_76163608_76180940
ENSMUSG00000020231.16_1	chr10	-	6554	37	NNC	ENSMUSG00000020231.16	novel	6551	37	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACATTCTTTACATGTC	NA	NA	NA	NA	NA	NA	NA	NA	76181125	76098570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140845_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76163535_76163608_76180940
ENSMUSG00000020231.16_7	chr10	-	6308	38	FSM	ENSMUSG00000020231.16	ENSMUST00000036033.14	6322	38	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCTGCATTTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	76181081	76098885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76100708_76101331_76101456_76102150_76102326_76104325_76104401_76105937_76105996_76106229_76106292_76108366_76108538_76108868_76109038_76109982_76110114_76110822_76110933_76112162_76112275_76112417_76112540_76114321_76114446_76115539_76115621_76115690_76115801_76116509_76116712_76118346_76118462_76121359_76121488_76122195_76122277_76123146_76123284_76126841_76126982_76128145_76128261_76130327_76130448_76131900_76131995_76132186_76132252_76133588_76133692_76134086_76134197_76134503_76134628_76135736_76135848_76138037_76138130_76140849_76141048_76142906_76143027_76149009_76149139_76153700_76153929_76155300_76155421_76157323_76157441_76163535_76163608_76180940
ENSMUSG00000020232.18_0	chr10	-	1459	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105323.8	1463	10	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81186314	81181885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186240
ENSMUSG00000020232.18_1	chr10	-	1612	9	FSM	ENSMUSG00000020232.18	ENSMUST00000020454.11	1621	9	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81186250	81181885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967
ENSMUSG00000020232.18_2	chr10	-	1525	10	FSM	ENSMUSG00000020232.18	ENSMUST00000105324.9	1540	10	14	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81186246	81181885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185323_81185967_81186024_81186106
ENSMUSG00000020232.18_5	chr10	-	1500	9	FSM	ENSMUSG00000020232.18	ENSMUST00000122993.8	1502	9	1	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTTAATATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81186024	81181885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81182312_81182393_81182527_81182674_81182891_81183269_81183343_81183819_81183867_81184329_81184451_81184719_81184924_81185213_81185437_81185967
ENSMUSG00000020235.17_0	chr10	-	3041	14	FSM	ENSMUSG00000020235.17	ENSMUST00000140901.8	3057	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATGAGATTGGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	81214341	81202062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81203385_81203474_81203568_81203964_81204070_81204356_81204591_81204907_81205093_81205171_81205275_81205804_81205871_81206031_81206216_81206298_81206382_81206530_81206659_81206788_81206853_81206928_81207055_81207178_81207289_81214103
ENSMUSG00000020238.15_0	chr10	-	3102	14	FSM	ENSMUSG00000020238.15	ENSMUST00000020463.14	3118	14	12	4	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTAGACCAGAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81332214	81322086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324193_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020238.15_9	chr10	-	2820	14	FSM	ENSMUSG00000020238.15	ENSMUST00000118498.8	2841	14	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCGAGCCTCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	81332146	81322297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81323440_81323513_81323593_81323680_81323735_81324028_81324190_81324261_81324301_81324382_81324471_81325635_81325955_81326060_81326150_81327003_81327108_81327810_81327892_81328661_81328757_81328896_81329042_81329182_81329374_81331913
ENSMUSG00000020241.14_0	chr10	-	3933	28	FSM	ENSMUSG00000020241.14	ENSMUST00000001181.13	3949	28	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCCTGTTGCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76459454	76431601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76432646_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76446996_76447024_76447249_76447277_76447625_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170_76450770_76450879_76451053_76459084
ENSMUSG00000020241.14_12	chr10	-	4647	28	FSM	ENSMUSG00000020241.14	ENSMUST00000105413.8	4653	28	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGCACTGCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76459155	76433670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76435728_76439162_76439202_76439295_76439749_76439889_76440043_76440178_76440225_76440682_76440719_76440893_76440957_76441607_76441671_76442005_76442042_76442408_76442460_76442928_76442992_76443560_76443624_76443940_76444004_76444541_76444605_76445090_76445181_76445353_76445417_76445993_76446057_76446483_76446538_76446862_76446908_76446996_76447024_76447249_76447277_76447625_76447671_76447781_76447836_76449088_76449155_76449942_76449964_76450170_76450770_76450879_76451053_76459084
ENSMUSG00000020246.14_0	chr10	+	3400	15	FSM	ENSMUSG00000020246.14	ENSMUST00000020478.14	3422	15	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAGTTACAGGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	82534853	82578253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82535141_82536752_82536902_82538276_82538438_82544842_82545052_82545797_82545883_82547668_82547776_82547883_82548073_82559452_82559621_82560177_82560231_82564086_82564262_82568436_82568511_82570183_82570316_82574112_82574299_82574813_82575100_82577114
ENSMUSG00000020248.19_0	chr10	-	2538	8	FSM	ENSMUSG00000020248.19	ENSMUST00000130911.8	2554	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTGCGCCTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	82599968	82584540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82586282_82586571_82586652_82587217_82587300_82588240_82588439_82590798_82590930_82592535_82592630_82597666_82597748_82599837
ENSMUSG00000020250.12_0	chr10	+	3610	15	FSM	ENSMUSG00000020250.12	ENSMUST00000219368.3	3622	15	5	7	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACACGCGTGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82669789	82733539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82669866_82708771_82709110_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_14	chr10	+	3515	14	FSM	ENSMUSG00000020250.12	ENSMUST00000219442.3	3531	14	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACACGCGTGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82696145	82733539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82696465_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020250.12_7	chr10	+	3304	14	FSM	ENSMUSG00000020250.12	ENSMUST00000020484.9	3325	14	14	7	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACACGCGTGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	82695026	82733539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82695135_82710446_82710570_82711457_82711531_82713099_82713220_82715039_82715183_82715583_82715700_82717556_82717783_82719747_82719841_82720318_82720396_82720775_82720933_82721019_82721128_82723006_82723103_82726217_82726353_82731810
ENSMUSG00000020251.14_0	chr10	-	2138	10	FSM	ENSMUSG00000020251.14	ENSMUST00000020485.10	2153	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTGTGATTTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	82526474	82486271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82487353_82488701_82488815_82490515_82490683_82495346_82495460_82496563_82496649_82497999_82498118_82500458_82500631_82506111_82506205_82507890_82507935_82526322
ENSMUSG00000020253.16_0	chr9	-	1837	10	FSM	ENSMUSG00000020253.16	ENSMUST00000140761.9	1846	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106076465	106072149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106076168
ENSMUSG00000020253.16_1	chr9	-	1805	10	FSM	ENSMUSG00000020253.16	ENSMUST00000076258.13	1811	10	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTTCTCTCTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	106076135	106072149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106072670_106072985_106073138_106073248_106073357_106073566_106073631_106073791_106073911_106074002_106074088_106074425_106074539_106074940_106075196_106075299_106075424_106075870
ENSMUSG00000020255.9_0	chr10	+	123168	4	FSM	ENSMUSG00000020255.9	ENSMUST00000020488.9	123179	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGTGTCAGTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	83196094	83324368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83196238_83197910_83197998_83200242_83200380_83201567
ENSMUSG00000020256.15_0	chr10	-	5985	23	FSM	ENSMUSG00000020256.15	ENSMUST00000020497.14	6027	23	22	20	22	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAATATTCTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83369982	83323333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_83326499_83328338_83328539_83329292_83329399_83331732_83331899_83333335_83333435_83335702_83335803_83337757_83337852_83338305_83338394_83339805_83339912_83339989_83340061_83342461_83342613_83343878_83344007_83344476_83344597_83348153_83348302_83349446_83349539_83350318_83350445_83351911_83352047_83354207_83354298_83354496_83354599_83356133_83356300_83358565_83358801_83363168_83363314_83369830
ENSMUSG00000020257.14_0	chr9	+	3728	9	FSM	ENSMUSG00000020257.14	ENSMUST00000020490.13	3747	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTCTTCCATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	106048139	106068332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106048579_106053811_106053910_106057764_106057832_106060814_106060915_106061378_106061496_106061881_106062038_106062447_106062518_106063568_106063712_106065794
ENSMUSG00000020258.17_1	chr9	-	1305	3	FSM	ENSMUSG00000020258.17	ENST00000305690.12	1315	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGCCAATAACGACTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	106035094	106032560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106033307_106034343_106034496_106034687
ENSMUSG00000020260.10_0	chr10	+	2273	9	FSM	ENSMUSG00000020260.10	ENSMUST00000020493.9	2290	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAGCTGCAGTCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	77095062	77105403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77095288_77096407_77096659_77098270_77098416_77099098_77099210_77100789_77100857_77101669_77101796_77102746_77102928_77103017_77103142_77104360
ENSMUSG00000020261.16_0	chr11	+	5250	11	FSM	ENSMUSG00000020261.16	ENSMUST00000108872.9	5264	11	12	2	12	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTTGCAAACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55095187	55127154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_55095315_55104755_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012_55119183_55123192
ENSMUSG00000020261.16_1	chr11	+	1285	10	FSM	ENSMUSG00000020261.16	ENST00000521925.5	1301	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATTTCTGCATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55095267	55119193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_55095361_55104735_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012
ENSMUSG00000020261.16_4	chr11	+	1189	9	ISM	ENSMUSG00000020261.16	ENSMUST00000108867.2	1611	10	115	4317	115	-11	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATTATTTCTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	55104735	55119190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_55104901_55109833_55109925_55110405_55110495_55111201_55111298_55112822_55112908_55114424_55114644_55115780_55115880_55116791_55116959_55119012
ENSMUSG00000020262.16_0	chr10	-	6521	11	FSM	ENSMUSG00000020262.16	ENSMUST00000020496.14	6549	11	20	8	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGACCTGCATGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	77254079	77126567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77130796_77131531_77131711_77139006_77139189_77146939_77147109_77148211_77148361_77149238_77149408_77153069_77153185_77157482_77158418_77161699_77161775_77195400_77195570_77253928
ENSMUSG00000020263.15_0	chr10	-	3004	21	FSM	ENSMUSG00000020263.15	ENSMUST00000020500.14	3020	21	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAACTGCTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83484594	83435904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_83436906_83437746_83437795_83438621_83438763_83438989_83439027_83441623_83441799_83444563_83444617_83444800_83444960_83446841_83446931_83447006_83447064_83447313_83447357_83448575_83448765_83450007_83450167_83453210_83453294_83456561_83456709_83457392_83457452_83457575_83457618_83460482_83460571_83464092_83464165_83464637_83464698_83476869_83476969_83484391
ENSMUSG00000020265.17_0	chr10	+	2611	4	FSM	ENSMUSG00000020265.17	ENSMUST00000020501.15	2630	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATACAACAGCACAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	77441943	77454159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77442176_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020265.17_4	chr10	+	1859	4	FSM	ENSMUSG00000020265.17	ENSMUST00000099538.6	1874	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTCTCTTGGCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	77442413	77453250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77442803_77445645_77445775_77449813_77449886_77451981
ENSMUSG00000020267.7_0	chr11	+	620	3	FSM	ENSMUSG00000020267.7	ENSMUST00000020504.6	636	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4903	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGGATTTGTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	54757220	54761323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54757427_54760673_54760779_54761014
ENSMUSG00000020268.15_0	chr11	-	3390	5	FSM	ENSMUSG00000020268.15	ENSMUST00000144164.9	3431	5	19	22	19	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATAAAAACAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	54751719	54729206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54732029_54739404_54739487_54741170_54741242_54744052_54744126_54751377
ENSMUSG00000020271.18_0	chr11	+	3807	13	FSM	ENSMUSG00000020271.18	ENSMUST00000109366.8	3821	13	11	3	-11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTATTGAAACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	32592734	32696566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32592936_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_15	chr11	+	3930	13	FSM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCCTCTGTTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	32592866	32696782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32592936_32630200_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_20	chr11	+	4010	14	FSM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCAGTTTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	32592877	32696810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32592936_32630200_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_28	chr11	+	3869	12	ISM	ENSMUSG00000020271.18	ENSMUST00000093205.13	3938	13	37334	0	37325	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGTCACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32630199	32696789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_32630303_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_31	chr11	+	3946	13	ISM	ENSMUSG00000020271.18	ENSMUST00000076383.8	4019	14	37332	6	37332	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCAGTTTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	32630206	32696810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_32630303_32658187_32658251_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020271.18_6	chr11	+	1909	12	FSM	ENSMUSG00000020271.18	ENST00000393802.6	1920	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGACCCCAGCGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32592750	32694747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32592936_32661771_32661998_32670471_32670659_32672054_32672146_32681335_32681474_32683499_32683619_32685137_32685388_32688361_32688481_32689155_32689267_32690186_32690266_32692458_32692645_32694529
ENSMUSG00000020272.9_0	chr11	+	5012	19	FSM	ENSMUSG00000020272.9	ENSMUST00000102821.4	5026	19	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGATTTGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	32483309	32574578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32483560_32505123_32505289_32524498_32524548_32527623_32527774_32537312_32537386_32538755_32538951_32539409_32539492_32546614_32546750_32548438_32548985_32550740_32550872_32553666_32553791_32554120_32554301_32560632_32560726_32562670_32562801_32563461_32563587_32564524_32564714_32565780_32565907_32567848_32567963_32572423
ENSMUSG00000020273.14_0	chr11	-	3723	22	FSM	ENSMUSG00000020273.14	ENSMUST00000020513.10	3747	22	14	10	-3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTTACTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23845239	23812655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23814057_23816410_23816468_23816629_23816696_23817197_23817419_23817501_23817591_23817956_23818127_23818358_23818481_23820192_23820303_23820742_23820863_23822426_23822481_23823227_23823313_23823789_23823911_23824474_23824548_23826319_23826459_23829873_23829964_23832182_23832295_23834060_23834115_23835163_23835274_23835490_23835573_23840228_23840296_23841742_23841905_23845021
ENSMUSG00000020275.10_0	chr11	-	7450	10	FSM	ENSMUSG00000020275.10	ENSMUST00000102864.5	7466	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTTGTTACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23720959	23686851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23693041_23694238_23694308_23694436_23694506_23695428_23695642_23695745_23695851_23698750_23698892_23703216_23703309_23706898_23707048_23711012_23711156_23720679
ENSMUSG00000020277.11_0	chr10	-	3712	22	FSM	ENSMUSG00000020277.11	ENSMUST00000020522.9	3730	22	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGTAAAAGTGGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	77845634	77822791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77824192_77824508_77824615_77824698_77824799_77825399_77825512_77825723_77825786_77825975_77826141_77826505_77826659_77827187_77827276_77827849_77827921_77828225_77828373_77829215_77829280_77829969_77830035_77831077_77831204_77832153_77832247_77833357_77833454_77835659_77835769_77835968_77836014_77836509_77836676_77837144_77837335_77837843_77837922_77841274_77841349_77845432
ENSMUSG00000020279.11_0	chr11	-	685	5	FSM	ENSMUSG00000020279.11	ENST00000369423.7	698	5	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGTAGGTAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32144713	32142652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_32142753_32143173_32143382_32143733_32143851_32144358_32144531_32144625
ENSMUSG00000020279.11_1	chr11	-	599	4	ISM	ENSMUSG00000020279.11	ENST00000369423.7	698	5	188	6	188	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGTAGGTAGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32144532	32142652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_32142753_32143173_32143382_32143733_32143851_32144358
ENSMUSG00000020280.13_1	chr11	+	3541	18	FSM	ENSMUSG00000020280.13	ENSMUST00000058163.11	3559	18	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTGAGCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	23616017	23682869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23616454_23617277_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658823_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020280.13_2	chr11	+	1726	17	FSM	ENSMUSG00000020280.13	ENST00000407787.5	1747	17	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATTTGTACGCATATTT	NA	NA	NA	NA	NA	NA	NA	NA	23617302	23681511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23617415_23622507_23622757_23623237_23623325_23649929_23649965_23652889_23653002_23656884_23656947_23657522_23657569_23658757_23658827_23661195_23661282_23662199_23662326_23667561_23667619_23668575_23668653_23668748_23668805_23670103_23670222_23675431_23675575_23678974_23679075_23681320
ENSMUSG00000020282.19_0	chr11	-	2932	18	FSM	ENSMUSG00000020282.19	ENSMUST00000020524.15	2946	18	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGATGAGGATTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	32172293	32159591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_32160224_32160397_32160552_32160657_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392_32164603_32164909_32165124_32165933_32166065_32166141_32166283_32172168
ENSMUSG00000020282.19_7	chr11	-	1935	14	FSM	ENSMUSG00000020282.19	ENST00000427504.1	1943	14	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCACTGAACCAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	32164435	32159814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_32160224_32160397_32160552_32160653_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181_32164305_32164392
ENSMUSG00000020282.19_8	chr11	-	1882	13	ISM	ENSMUSG00000020282.19	ENST00000427504.1	1943	14	141	8	141	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCACTGAACCAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	32164294	32159814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_32160224_32160397_32160552_32160653_32160759_32160826_32160903_32161110_32161206_32161581_32161646_32161919_32162021_32162622_32162785_32162867_32162943_32163051_32163164_32163259_32163518_32163951_32164110_32164181
ENSMUSG00000020283.6_0	chr11	-	4127	4	FSM	ENSMUSG00000020283.6	ENSMUST00000020523.4	4146	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAAAACAAAGTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	23615949	23596487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23599591_23600929_23601056_23605435_23606131_23615746
ENSMUSG00000020284.17_0	chr10	+	1804	7	FSM	ENSMUSG00000020284.17	ENSMUST00000105397.10	1818	7	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTCTGTGTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	77814368	77821265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_77814616_77815586_77815606_77816334_77816382_77817417_77817648_77818703_77818876_77819349_77819426_77820252
ENSMUSG00000020286.14_0	chr11	-	1018	5	FSM	ENSMUSG00000020286.14	ENSMUST00000020527.13	1030	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTGTCTAGCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	23469218	23466209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23466611_23467211_23467381_23468040_23468143_23468780_23468977_23469068
ENSMUSG00000020286.14_1	chr11	-	1308	5	FSM	ENSMUSG00000020286.14	ENSMUST00000169264.8	1320	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTGTCTAGCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	23469937	23466209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23466611_23467211_23467381_23468040_23468143_23468780_23468977_23469497
ENSMUSG00000020287.16_0	chr11	+	1720	4	FSM	ENSMUSG00000020287.16	ENSMUST00000020528.14	1737	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGACATTGATGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32176519	32182692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32176718_32177751_32177950_32179848_32180054_32181573
ENSMUSG00000020288.14_0	chr11	-	3564	9	FSM	ENSMUSG00000020288.14	ENSMUST00000109539.8	3583	9	15	4	15	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAAATGTGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	23447915	23437885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446877_23447774
ENSMUSG00000020288.14_3	chr11	-	3008	9	FSM	ENSMUSG00000020288.14	ENSMUST00000020529.13	3023	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAGAGGGCACTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	23448022	23438553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442217_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000020288.14_6	chr11	-	1000	9	FSM	ENSMUSG00000020288.14	ENST00000489653.6	1006	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAGTTAGGTTTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	23447849	23440398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23440571_23440668_23440721_23441012_23441115_23441474_23441583_23442207_23442307_23443278_23443394_23444978_23445065_23446690_23446882_23447774
ENSMUSG00000020289.16_0	chr11	-	2847	13	FSM	ENSMUSG00000020289.16	ENSMUST00000020530.12	2865	13	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGGCTGTTTGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	32217695	32181968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_32183117_32183903_32184097_32184731_32184922_32186787_32186918_32187299_32187407_32189796_32189954_32191797_32191936_32198144_32198227_32200124_32200279_32203874_32203950_32205438_32205569_32213024_32213095_32217422
ENSMUSG00000020290.15_0	chr11	+	4387	25	FSM	ENSMUSG00000020290.15	ENST00000676553.1	4408	25	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23205568	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23205798_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_17	chr11	+	4336	25	FSM	ENSMUSG00000020290.15	ENST00000677928.1	4352	25	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23206064	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23206155_23211746_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_34	chr11	+	4185	24	FSM	ENSMUSG00000020290.15	ENST00000676789.1	4204	24	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCTTTAAGAACACTACT	NA	NA	NA	NA	NA	NA	NA	NA	23206512	23246962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23245960
ENSMUSG00000020290.15_41	chr11	+	3123	17	FSM	ENSMUSG00000020290.15	ENST00000677850.1	3152	17	12	17	12	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCAAAATAAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23206510	23246983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23245960
ENSMUSG00000020290.15_45	chr11	+	4234	24	FSM	ENSMUSG00000020290.15	ENST00000678081.1	4251	24	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23206506	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23206718_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_59	chr11	+	4255	25	FSM	ENSMUSG00000020290.15	ENST00000677417.1	4270	25	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23207112	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23207210_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_67	chr11	+	4095	24	FSM	ENSMUSG00000020290.15	ENST00000676999.1	4107	24	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23207465	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23207538_23211834_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23227035_23227081_23228142_23228325_23228675_23228725_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020290.15_78	chr11	+	3876	21	FSM	ENSMUSG00000020290.15	ENST00000678877.1	3894	21	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATGAAGGTGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23211840	23247043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23211967_23217661_23217764_23221132_23221206_23226426_23226489_23228805_23228926_23230373_23230503_23231305_23231465_23232528_23232727_23234241_23234381_23234547_23234730_23234811_23234969_23235055_23235220_23235800_23235936_23236744_23236929_23237344_23237452_23239757_23239953_23241462_23241632_23243771_23243907_23243988_23244149_23244595_23244693_23245960
ENSMUSG00000020300.15_0	chr11	+	2589	8	FSM	ENSMUSG00000020300.15	ENST00000520867.5	2599	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGCAGTGTGTAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31821911	31881630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_31823413_31839857_31839940_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020300.15_3	chr11	+	1387	8	FSM	ENSMUSG00000020300.15	ENST00000522336.5	1405	8	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACATATAAGAAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	31839864	31881885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_31839940_31858824_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020300.15_7	chr11	+	1312	7	ISM	ENSMUSG00000020300.15	ENST00000522336.5	1405	8	18964	14	18964	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACATATAAGAAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	31858824	31881885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_31858876_31870408_31870583_31874625_31874716_31875348_31875468_31877640_31877756_31880037_31880220_31881304
ENSMUSG00000020303.3_0	chr11	-	3905	4	FSM	ENSMUSG00000020303.3	ENSMUST00000020546.3	3940	4	30	5	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATGACCTGCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	31320044	31307311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_31310529_31315331_31315544_31317725_31317869_31319711
ENSMUSG00000020305.14_0	chr11	+	1853	2	FSM	ENSMUSG00000043999.7	ENST00000394705.3	1864	2	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCCAGCGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30835422	30842717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_30835547_30840988
ENSMUSG00000020305.14_1	chr11	+	3221	10	FSM	ENSMUSG00000020305.14	ENSMUST00000020551.13	3228	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTATTATTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30904401	31052704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_30904570_30948312_30948522_30978907_30979067_31005457_31005571_31006101_31006238_31008821_31009000_31011388_31011587_31031361_31031623_31035000_31035132_31051036
ENSMUSG00000020307.16_0	chr10	+	1061	5	FSM	ENSMUSG00000020307.16	ENSMUST00000020550.13	1266	5	201	4	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	79518229	79524228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUSG00000020307.16_1	chr10	+	1083	6	NNC	ENSMUSG00000020307.16	novel	1078	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCTGAGAGAATCACCT	NA	NA	NA	NA	NA	NA	NA	NA	79518137	79524228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_+_79518149_79518218_79518425_79520651_79520739_79520838_79520937_79521066_79521202_79523682
ENSMUSG00000020308.8_0	chr10	+	1087	2	FSM	ENSMUSG00000020308.8	ENSMUST00000239401.2	1101	2	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTAAAACGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	79505243	79511946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79505618_79511233
ENSMUSG00000020309.7_0	chr11	-	1294	3	FSM	ENSMUSG00000020309.7	ENSMUST00000101394.5	1315	3	11	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATTATAATTTCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	30936339	30926716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30927747_30929564_30929601_30936111
ENSMUSG00000020309.7_1	chr11	-	991	2	FSM	ENSMUSG00000020309.7	ENSMUST00000020553.5	1018	2	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAGACCAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30936319	30926963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30927747_30936111
ENSMUSG00000020311.18_0	chr11	-	2508	14	FSM	ENSMUSG00000020311.18	ENSMUST00000073192.14	2532	14	20	4	17	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGGGGTTCATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30904132	30880777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30893698_30893861_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUSG00000020311.18_9	chr11	-	2175	13	FSM	ENSMUSG00000020311.18	ENST00000378239.5	2196	13	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCAGATTATTCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	30904135	30880951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30881849_30884671_30884748_30884981_30885060_30889496_30889622_30893038_30893099_30898078_30898209_30898299_30898524_30899942_30899978_30900559_30900624_30900740_30900819_30901306_30901388_30902571_30902677_30903913
ENSMUSG00000020312.13_0	chr10	-	3202	13	FSM	ENSMUSG00000020312.13	ENSMUST00000020564.7	3243	13	23	18	23	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAGAAACATACTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79473729	79454503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79455934_79456887_79457022_79458088_79458400_79459660_79459826_79461926_79461991_79462088_79462255_79462633_79462761_79462853_79462906_79463028_79463083_79465656_79465777_79465901_79465963_79467098_79467170_79473282
ENSMUSG00000020315.19_0	chr11	-	8503	36	FSM	ENSMUSG00000020315.19	ENST00000615901.4	8516	36	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTGAGTGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30218144	30049335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068286_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073794_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
ENSMUSG00000020315.19_10	chr11	-	8215	35	FSM	ENSMUSG00000020315.19	ENSMUST00000011877.13	8238	35	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAGCCTATGACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	30169755	30049401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578
ENSMUSG00000020315.19_23	chr11	-	9104	31	FSM	ENSMUSG00000020315.19	ENSMUST00000102838.10	9107	31	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTGGTGTGGGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30148255	30056785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30147723
ENSMUSG00000020315.19_8	chr11	-	8444	36	FSM	ENSMUSG00000020315.19	ENSMUST00000006629.14	8461	36	10	7	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAGCCTATGACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	30218159	30049401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30050715_30051612_30051656_30053247_30053422_30054435_30054675_30059088_30059153_30059870_30059981_30060725_30060923_30062826_30062912_30063855_30063995_30064675_30064921_30067635_30068011_30068290_30068496_30069376_30069508_30070529_30070812_30070975_30071066_30071475_30071701_30073798_30074063_30074865_30075013_30079569_30079661_30085939_30086143_30086873_30087631_30088363_30088502_30088591_30089463_30090470_30090625_30092119_30092423_30093018_30093178_30094105_30094224_30095828_30096017_30096738_30096852_30099499_30099616_30099929_30100011_30101555_30101648_30104228_30104403_30109293_30109446_30169578_30169773_30217947
ENSMUSG00000020319.10_0	chr11	+	2772	18	FSM	ENSMUSG00000020319.10	ENSMUST00000020568.10	2792	18	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCTTACAAATTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21522246	21848981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_21522371_21602225_21602311_21609994_21610043_21610888_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512_21674637_21698877_21698942_21763359_21763463_21807446_21807610_21834983_21835088_21836259_21836289_21848475
ENSMUSG00000020319.10_11	chr11	+	1587	10	ISM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	7772	4	7772	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTGACGCCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21609993	21674634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_21610043_21610894_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512
ENSMUSG00000020319.10_5	chr11	+	1670	11	FSM	ENSMUSG00000020319.10	ENST00000409562.7	1679	11	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTGACGCCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21602226	21674634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_21602311_21609994_21610043_21610894_21610940_21613996_21614068_21614325_21614386_21639567_21639683_21641769_21641904_21645113_21645306_21661461_21662072_21671102_21671292_21674512
ENSMUSG00000020321.17_0	chr11	-	2078	9	FSM	ENSMUSG00000020321.17	ENSMUST00000102874.11	2122	9	44	0	44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGCTGTAATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21522149	21506786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21512864_21512988_21514040_21514217_21515823_21515921_21516619_21516719_21521729
ENSMUSG00000020321.17_2	chr11	-	684	5	FSM	ENSMUSG00000020321.17	ENST00000409908.5	699	5	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAATTGTGAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21521815	21507351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698_21509876_21521729
ENSMUSG00000020321.17_3	chr11	-	599	4	ISM	ENSMUSG00000020321.17	ENST00000409908.5	699	5	11945	9	11945	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAATTGTGAACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	21509876	21507351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_21507569_21508461_21508552_21509191_21509306_21509698
ENSMUSG00000020323.15_4	chr10	-	2678	5	FSM	ENSMUSG00000020323.15	ENSMUST00000020573.13	2693	5	10	5	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACACGAAGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79624809	79617312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79619295_79620179_79620444_79621588_79621734_79623191_79623346_79624676
ENSMUSG00000020323.15_5	chr10	-	2838	6	FSM	ENSMUSG00000020323.15	ENSMUST00000169684.2	2841	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCACACGAAGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79626795	79617312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79619295_79620179_79620444_79621588_79621734_79623191_79623346_79624676_79624877_79626702
ENSMUSG00000020325.11_0	chr10	+	1934	5	FSM	ENSMUSG00000020325.11	ENSMUST00000020575.5	1955	5	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAACCACCGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	79613114	79618452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79613232_79614396_79614583_79615798_79616015_79616957_79617186_79617265
ENSMUSG00000020326.8_0	chr11	-	3494	6	FSM	ENSMUSG00000020326.8	ENSMUST00000020576.8	3512	6	10	8	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCAACCTTCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	40646128	40639386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634_40644896_40645827
ENSMUSG00000020326.8_21	chr11	-	735	5	FSM	ENSMUSG00000020326.8	ENST00000512163.5	749	5	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATTTGTTAGTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	40645952	40641708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40645827
ENSMUSG00000020326.8_7	chr11	-	2092	6	FSM	ENSMUSG00000020326.8	ENST00000393929.5	2112	6	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTGAAATGCAACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	40644888	40639393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40640613_40641699_40641887_40642087_40642187_40642266_40642346_40642930_40643185_40644634
ENSMUSG00000020328.11_0	chr11	+	1559	4	FSM	ENSMUSG00000020328.11	ENSMUST00000020578.11	1577	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAATATTTTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40624504	40630866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_40624982_40626844_40626894_40627319_40627472_40629985
ENSMUSG00000020329.13_0	chr10	-	3734	21	FSM	ENSMUSG00000020329.13	ENSMUST00000020580.13	3755	21	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAGTAATGAGACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79582399	79571970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79572118_79572200_79572278_79572356_79572449_79572567_79572641_79573097_79573197_79573290_79573344_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011_79579563_79581507_79581607_79582298
ENSMUSG00000020329.13_6	chr10	-	2731	14	FSM	ENSMUSG00000020329.13	ENST00000578759.1	2746	14	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGGGTCCCAGGACGA	NA	NA	NA	NA	NA	NA	NA	NA	79579157	79573101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79573245_79573433_79573548_79573633_79573721_79573864_79574045_79574161_79574285_79574515_79574639_79574976_79575766_79575977_79576200_79576412_79576584_79576666_79576832_79576960_79577111_79577541_79577729_79577821_79577953_79579011
ENSMUSG00000020330.17_0	chr11	-	3869	18	FSM	ENSMUSG00000020330.17	ENSMUST00000020579.9	3892	18	9	14	9	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAAACTCATACACC	NA	NA	NA	NA	NA	NA	NA	NA	40624240	40592235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598277_40598391_40598545_40598841_40598989_40600734_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ENSMUSG00000020330.17_20	chr11	-	2273	18	FSM	ENSMUSG00000020330.17	ENST00000393915.9	2281	18	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAACGGTAATTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	40624193	40593528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948_40620048_40624140
ENSMUSG00000020330.17_23	chr11	-	2213	17	ISM	ENSMUSG00000020330.17	ENST00000393915.9	2281	18	4152	9	4152	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGAAACGGTAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40620041	40593529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40615699_40615748_40619253_40619334_40619948
ENSMUSG00000020330.17_60	chr11	-	1964	15	FSM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTCTTCATTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40624193	40593610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224_40614414_40624140
ENSMUSG00000020330.17_61	chr11	-	1907	14	ISM	ENSMUSG00000020330.17	ENST00000432118.6	1971	15	9784	7	9784	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTTCTTCATTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	40614409	40593610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_40593686_40594608_40594763_40596718_40596896_40598176_40598272_40598391_40598545_40598841_40598989_40600985_40601104_40604804_40605020_40605537_40605687_40606067_40606244_40606695_40606771_40612465_40612567_40612656_40612744_40614224
ENSMUSG00000020333.18_0	chr11	+	2576	21	FSM	ENSMUSG00000020333.18	ENST00000651427.1	2589	21	11	2	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAATTCCATTAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	54205776	54252327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54206034_54210977_54211094_54214066_54214182_54214815_54214881_54215891_54215994_54216386_54216487_54217940_54218120_54219227_54219261_54220745_54220798_54225877_54225952_54227896_54227975_54229237_54229373_54229825_54229961_54231322_54231419_54232584_54232658_54236001_54236091_54236703_54236821_54241383_54241528_54242847_54242950_54243816_54243889_54251885
ENSMUSG00000020334.7_0	chr11	-	2236	10	FSM	ENSMUSG00000020334.7	ENSMUST00000020586.7	2263	10	17	10	17	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTATTAGATGGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	53918899	53873958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882912_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020334.7_2	chr11	-	1962	11	FSM	ENSMUSG00000020334.7	ENST00000200652.4	1986	11	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCCAAATAAAATTATCACA	NA	NA	NA	NA	NA	NA	NA	NA	53918796	53873975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53874250_53874397_53874512_53877303_53877440_53879607_53879791_53881449_53881665_53882810_53882906_53886789_53886917_53888202_53888375_53896219_53896375_53898593_53898698_53918409
ENSMUSG00000020335.14_0	chr11	-	2423	5	FSM	ENSMUSG00000020335.14	ENSMUST00000109124.10	2455	5	25	7	25	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTGTCAAACTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	50822435	50812656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50814668_50819390_50819487_50820203_50820331_50821727_50821813_50822331
ENSMUSG00000020340.17_0	chr11	-	4181	32	FSM	ENSMUSG00000020340.17	ENST00000616178.4	4213	32	10	22	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAAAAAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	46203169	46086921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_46087295_46089817_46089966_46091472_46091712_46098213_46098309_46099114_46099188_46112162_46112294_46113436_46113528_46114888_46115033_46130830_46130919_46133113_46133314_46138385_46138506_46140556_46140666_46143430_46143508_46144773_46144871_46145336_46145494_46148375_46148530_46149502_46149578_46151626_46151775_46152263_46152431_46156730_46156857_46157536_46157657_46161378_46161497_46163435_46163528_46165464_46165570_46167605_46167735_46168885_46168983_46170778_46170961_46174983_46175086_46176893_46176972_46180458_46180549_46182339_46182480_46203053
ENSMUSG00000020346.17_0	chr11	+	3141	4	FSM	ENSMUSG00000020346.17	ENSMUST00000167400.8	3151	4	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	49135027	49153849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49135167_49136019_49136445_49142376_49142502_49151397
ENSMUSG00000020346.17_1	chr11	+	2962	3	FSM	ENSMUSG00000020346.17	ENSMUST00000081794.7	2976	3	3	11	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCTGAAAAATAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	49135075	49153843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49135167_49136019_49136445_49151397
ENSMUSG00000020346.17_3	chr11	+	2713	3	FSM	ENSMUSG00000020346.17	ENSMUST00000101293.11	2729	3	8	8	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAAGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	49141346	49153849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49141483_49142376_49142502_49151397
ENSMUSG00000020349.5_0	chr11	+	7087	7	FSM	ENSMUSG00000020349.5	ENSMUST00000020608.3	7102	7	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCACCTCCTGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	51989514	52018597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51989978_52003946_52004157_52008813_52008988_52009495_52009586_52009969_52010132_52011759_52011879_52012728
ENSMUSG00000020354.16_0	chr11	-	3164	9	FSM	ENSMUSG00000020354.16	ENST00000435422.7	3173	9	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCAGTTGCTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	47270529	46868150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_46869533_46869626_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011_47246201_47270080
ENSMUSG00000020354.16_2	chr11	-	1609	8	FSM	ENSMUSG00000020354.16	ENSMUST00000077221.6	1617	8	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACTGGTCAAAAAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	47270348	46869618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_46870264_46871637_46871762_46973605_46973679_47016361_47016482_47023424_47023513_47085857_47085960_47246011_47246201_47270080
ENSMUSG00000020357.4_0	chr11	+	3728	27	FSM	ENSMUSG00000020357.4	ENST00000502649.5	3742	27	12	2	12	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	4877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGGGCCTCCGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	49516058	49538857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535113_49535260_49536717_49536839_49538773
ENSMUSG00000020357.4_2	chr11	+	3735	27	ISM	ENSMUSG00000020357.4	ENSMUST00000020617.3	6255	30	15965	4709	8	-2	internal_fragment	TRUE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGGGCCTCCGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	49516054	49538857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_49516299_49516524_49516638_49516727_49516891_49517082_49517223_49517495_49517665_49517946_49518065_49521095_49521251_49521339_49521503_49522805_49522933_49523969_49524079_49524812_49525176_49525475_49525623_49525719_49525852_49526000_49526108_49526428_49526565_49527052_49527158_49527485_49527600_49527809_49527899_49528028_49528180_49528612_49528708_49529088_49529212_49531008_49531121_49533047_49533148_49534261_49534368_49535110_49535260_49536717_49536839_49538773
ENSMUSG00000020358.18_0	chr11	-	2354	7	FSM	ENSMUSG00000020358.18	ENSMUST00000074669.10	2370	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGGCTGTTCTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	51497664	51490932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51492306_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUSG00000020358.18_4	chr11	-	1987	7	FSM	ENSMUSG00000020358.18	ENSMUST00000101249.9	2013	7	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCCCAAGCCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	51497659	51491706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUSG00000020358.18_7	chr11	-	1415	8	FSM	ENSMUSG00000020358.18	ENSMUST00000109103.4	1437	8	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGGTTACCCTGTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	51497658	51492006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51492306_51492576_51492718_51493419_51493523_51495226_51495359_51495485_51495645_51496287_51496457_51497166_51497414_51497493
ENSMUSG00000020359.14_0	chr11	+	3106	13	FSM	ENSMUSG00000020359.14	ENSMUST00000167797.8	3116	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCAACTTGGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	51475593	51495316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51493621
ENSMUSG00000020359.14_3	chr11	+	1582	13	FSM	ENSMUSG00000020359.14	ENSMUST00000020625.7	1609	13	23	4	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAATTTGGTACATAA	NA	NA	NA	NA	NA	NA	NA	NA	51475638	51492151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51475707_51476340_51476460_51477387_51477548_51482225_51482301_51482832_51482921_51482995_51483113_51484430_51484514_51484742_51484969_51489102_51489258_51489477_51489568_51490292_51490424_51491395_51491450_51491935
ENSMUSG00000020361.14_0	chr11	-	4599	19	FSM	ENSMUSG00000020361.14	ENSMUST00000020630.8	4618	19	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAATGGTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	53191273	53150648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53152643_53153090_53153253_53153706_53153827_53155860_53155969_53156750_53156877_53157792_53157946_53159316_53159413_53160514_53160697_53161772_53161907_53162840_53162948_53163553_53163706_53165969_53166047_53171294_53171540_53174355_53174490_53174926_53175027_53177679_53177803_53179850_53179992_53183083_53183142_53190886
ENSMUSG00000020362.14_0	chr11	-	5733	12	FSM	ENSMUSG00000020362.14	ENSMUST00000145353.8	5736	12	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAAGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	49603550	49562332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_49566233_49568126_49568330_49570747_49570979_49571967_49572123_49572865_49573021_49573951_49574110_49575913_49575983_49576074_49576180_49577673_49577760_49579991_49580179_49593367_49593482_49603180
ENSMUSG00000020363.7_0	chr11	+	2939	19	FSM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTTTCCGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	49685013	49729432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49685071_49695778_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ENSMUSG00000020363.7_1	chr11	+	2851	18	ISM	ENSMUSG00000020363.7	ENSMUST00000020629.5	2947	19	10796	8	10796	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTTTTTTCCGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	49695809	49729432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_49695887_49698521_49698621_49699860_49699987_49701790_49701850_49702496_49702632_49706106_49706169_49709406_49709487_49709963_49710082_49714038_49714203_49714560_49714657_49714767_49714866_49715158_49715280_49717570_49717729_49717957_49718073_49720566_49720695_49723687_49723856_49726438_49726601_49728547
ENSMUSG00000020364.15_0	chr11	+	4152	5	FSM	ENSMUSG00000020364.15	ENSMUST00000109122.8	4165	5	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAGATGACCCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	50950122	50963615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50950230_50950612_50950869_50951686_50951814_50952229_50952326_50960049
ENSMUSG00000020366.19_0	chr11	+	4665	12	FSM	ENSMUSG00000020366.19	ENSMUST00000109179.9	4682	12	11	6	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTGTGTACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49737588	49777242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ENSMUSG00000020366.19_1	chr11	+	4670	12	FSM	ENSMUSG00000020366.19	ENSMUST00000178543.8	4677	12	0	7	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTGCCTGTGTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	49737577	49777241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764662_49764735_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUSG00000020366.19_13	chr11	+	1446	10	FSM	ENSMUSG00000020366.19	ENST00000347470.8	1464	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGTACAAACCACA	NA	NA	NA	NA	NA	NA	NA	NA	49737608	49774303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUSG00000020366.19_23	chr11	+	1347	7	FSM	ENSMUSG00000020366.19	ENST00000539014.5	1365	7	9	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTCACATCAGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	49745085	49765753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49764870_49764937_49765090
ENSMUSG00000020366.19_4	chr11	+	4674	12	FSM	ENSMUSG00000020366.19	ENSMUST00000164643.8	4682	12	7	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTACTTGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	49737584	49777247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773968
ENSMUSG00000020366.19_8	chr11	+	4656	12	FSM	ENSMUSG00000020366.19	ENSMUST00000020634.14	4675	12	13	6	-6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTGCCTGTGTACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49737592	49777242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49737803_49745039_49745210_49754370_49754501_49757809_49757869_49759998_49760138_49763560_49763727_49765090_49765163_49769057_49769241_49770528_49770654_49772045_49772110_49772957_49773027_49773973
ENSMUSG00000020368.16_0	chr11	-	4261	15	FSM	ENSMUSG00000020368.16	ENSMUST00000179865.8	4281	15	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAACACTGAATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	50216483	50184790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216319
ENSMUSG00000020368.16_107	chr11	-	3757	15	FSM	ENSMUSG00000020368.16	ENSMUST00000020637.9	3779	15	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAGAAATGAATACATGT	NA	NA	NA	NA	NA	NA	NA	NA	50216491	50185306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50216319
ENSMUSG00000020368.16_11	chr11	-	3748	15	FSM	ENSMUSG00000020368.16	ENST00000680618.1	3762	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCGGTTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50216439	50185241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50216337
ENSMUSG00000020368.16_12	chr11	-	3538	14	FSM	ENSMUSG00000020368.16	ENST00000680006.1	3548	14	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCGGTTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50216388	50185241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50216319
ENSMUSG00000020368.16_21	chr11	-	4212	15	FSM	ENSMUSG00000020368.16	ENST00000681712.1	4225	15	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCGGTTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50250380	50185241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202612_50249818
ENSMUSG00000020368.16_26	chr11	-	4174	15	FSM	ENSMUSG00000020368.16	ENST00000681903.1	4191	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATCGGTTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50250376	50185241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50187163_50187884_50187965_50188100_50188222_50188943_50189064_50189955_50190172_50191724_50191882_50192584_50192699_50195152_50195343_50198296_50198490_50199136_50199219_50199614_50199757_50201198_50201258_50201620_50201695_50202430_50202608_50249848
ENSMUSG00000020372.16_1	chr11	+	1433	8	FSM	ENSMUSG00000020372.16	ENSMUST00000020640.8	1447	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	8746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAACCCACCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	48691197	48697258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020372.16_10	chr11	+	343	3	FSM	ENSMUSG00000020372.16	ENST00000504726.1	362	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAACTGGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48691228	48696892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48691400_48696396_48696483_48696806
ENSMUSG00000020372.16_11	chr11	+	785	6	FSM	ENSMUSG00000020372.16	ENST00000511566.5	803	6	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAACTGGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48691227	48696892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48691400_48692489_48692662_48693099_48693248_48694230_48694327_48694684_48694796_48696806
ENSMUSG00000020372.16_14	chr11	+	892	7	FSM	ENSMUSG00000020372.16	ENST00000511900.5	911	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAACTGGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48691228	48696892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48691400_48692489_48692666_48694230_48694327_48694684_48694796_48694982_48695124_48696371_48696483_48696806
ENSMUSG00000020375.10_0	chr11	-	2664	18	FSM	ENSMUSG00000020375.10	ENSMUST00000020643.4	2688	18	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGACAAAGTGCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	50321937	50280121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50280786_50281120_50281199_50282845_50282895_50285747_50285843_50288470_50288601_50289197_50289318_50292264_50292363_50295280_50295449_50297193_50297311_50298649_50298752_50301392_50301463_50305343_50305410_50307066_50307129_50308010_50308135_50310447_50310550_50311203_50311322_50312456_50312631_50321610
ENSMUSG00000020377.16_0	chr11	-	616	5	FSM	ENSMUSG00000020377.16	ENSMUST00000102772.4	649	5	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACGGTTCCGTCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	50129333	50127305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50127540_50127843_50127926_50128020_50128092_50128167_50128268_50129204
ENSMUSG00000020380.17_1	chr11	-	5143	25	FSM	ENSMUSG00000020380.17	ENSMUST00000020649.14	5153	25	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGCATGGATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	53598137	53540346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53541483_53543060_53543195_53545703_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020380.17_2	chr11	-	5132	25	NNC	ENSMUSG00000020380.17	novel	5153	25	NA	NA	24	-1	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGGGCATGGATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	53598122	53540346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_53541483_53543060_53543195_53545699_53545847_53546359_53546446_53558848_53559074_53560456_53560585_53565524_53565639_53565729_53565823_53566728_53566840_53569691_53569886_53570216_53570344_53570859_53571050_53574028_53574267_53574952_53575129_53576976_53577135_53578921_53579105_53582939_53583147_53583534_53583729_53585727_53585894_53586109_53586239_53588940_53589146_53589648_53589835_53592783_53592936_53596811_53596896_53597753
ENSMUSG00000020381.11_0	chr11	+	1131	7	FSM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGTCCTCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	50065680	50090936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50065779_50067653_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ENSMUSG00000020381.11_5	chr11	+	1035	6	ISM	ENSMUSG00000020381.11	ENSMUST00000020647.10	1142	7	1976	6	1976	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGAGTCCTCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	50067651	50090936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_50067714_50073318_50073408_50085034_50085111_50087770_50087920_50088445_50088531_50090362
ENSMUSG00000020385.17_0	chr11	+	1931	13	FSM	ENSMUSG00000020385.17	ENSMUST00000093132.13	1949	13	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGACCACTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	51153949	51172582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51154097_51157997_51158159_51162626_51162850_51163904_51163996_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_11	chr11	+	1542	10	ISM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	8612	3	-1653	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	51162624	51172590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_13	chr11	+	1378	9	FSM	ENSMUSG00000020385.17	ENSMUST00000109111.2	1427	9	48	1	48	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	51164325	51172590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020385.17_6	chr11	+	1614	11	FSM	ENSMUSG00000020385.17	ENSMUST00000109113.8	1627	11	10	3	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	51154022	51172590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51154097_51162626_51162850_51164386_51164454_51166037_51166155_51166238_51166406_51166596_51166692_51166944_51167075_51168679_51168763_51171184_51171265_51171935_51172027_51172103
ENSMUSG00000020386.6_0	chr11	+	1185	7	FSM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGACTCAGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	51654521	51682744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51654619_51668313_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUSG00000020386.6_2	chr11	+	1091	6	ISM	ENSMUSG00000020386.6	ENSMUST00000020653.6	1201	7	13797	8	13797	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATTTGACTCAGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	51668310	51682744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_51668389_51670515_51670636_51673598_51673665_51678976_51679081_51680023_51680156_51682153
ENSMUSG00000020387.16_16	chr11	-	2550	12	FSM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACCCAGGCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	51747920	51707723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51747858
ENSMUSG00000020387.16_17	chr11	-	2485	11	ISM	ENSMUSG00000020387.16	ENST00000612830.2	2552	12	8045	2	7634	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACCCAGGCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	51739875	51707723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_51708528_51709323_51709456_51711905_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820
ENSMUSG00000020387.16_25	chr11	-	1675	10	FSM	ENSMUSG00000020387.16	ENST00000681498.1	1688	10	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCACGGCGCCCCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	51747500	51711903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51712024_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51747379
ENSMUSG00000020387.16_4	chr11	-	2746	11	FSM	ENSMUSG00000020387.16	ENST00000402835.5	2761	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCACCCCGTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	51748399	51707594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51708528_51709323_51709456_51715769_51716235_51717385_51717503_51719092_51719261_51721242_51721455_51722079_51722241_51726399_51726558_51737432_51737528_51739820_51739879_51748152
ENSMUSG00000020388.13_0	chr11	-	1170	7	FSM	ENSMUSG00000020388.13	ENSMUST00000018755.10	1182	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGCTAGTGTCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	53959830	53945755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53946066_53946182_53946301_53946615_53946780_53946968_53947151_53950763_53950843_53954460_53954613_53959665
ENSMUSG00000020389.20_0	chr11	+	2723	14	FSM	ENSMUSG00000020389.20	ENSMUST00000109080.9	2749	14	19	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTTAACATAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	51895066	51928985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51895245_51895736_51895920_51901957_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51926773_51926848_51928257
ENSMUSG00000020389.20_10	chr11	+	1720	12	FSM	ENSMUSG00000020389.20	ENST00000523054.5	1732	12	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAATCTTAAAAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	51901966	51928333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51902153_51909103_51909283_51910556_51910670_51913564_51913705_51916665_51916755_51917585_51917746_51917839_51918169_51920668_51920763_51923188_51923352_51924340_51924439_51926989_51927083_51928257
ENSMUSG00000020390.13_0	chr11	-	1780	6	FSM	ENSMUSG00000020390.13	ENSMUST00000020657.13	1792	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACACCAGCCTCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	51891301	51876325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51877638_51879438_51879528_51882220_51882311_51886200_51886227_51888644_51888726_51891119
ENSMUSG00000020392.9_0	chr11	+	1813	3	FSM	ENSMUSG00000020392.9	ENSMUST00000102763.5	1832	3	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGAAGTTAGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	51858498	51868153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_51858785_51860970_51861071_51866726
ENSMUSG00000020393.17_0	chr11	-	4840	9	FSM	ENSMUSG00000020393.17	ENSMUST00000020662.15	4856	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCGTGGTGAGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5211547	5141556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5145122_5148309_5148395_5149501_5149712_5151696_5152030_5159938_5160093_5165406_5165532_5188410_5188503_5193774_5193938_5211434
ENSMUSG00000020397.16_0	chr11	+	1186	3	FSM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATAACGAATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	46327778	46332347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_46327837_46330632_46330803_46331389
ENSMUSG00000020397.16_2	chr11	+	2373	2	FSM	ENSMUSG00000020397.16	ENSMUST00000170928.8	2390	2	9	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATTATCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46327796	46333540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_46328019_46331389
ENSMUSG00000020397.16_5	chr11	+	2525	3	FSM	ENSMUSG00000020397.16	ENSMUST00000109232.4	2547	3	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAATTATCCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46327814	46333540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_46328019_46330632_46330803_46331389
ENSMUSG00000020397.16_9	chr11	+	1108	2	ISM	ENSMUSG00000020397.16	ENSMUST00000020665.13	1193	3	2865	16	2843	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTTGAAGTAATAACG	NA	NA	NA	NA	NA	NA	NA	NA	46330643	46332338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_46330803_46331389
ENSMUSG00000020399.15_0	chr11	+	2694	7	FSM	ENSMUSG00000020399.15	ENSMUST00000020668.15	2721	7	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTAAACCAGATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	46345779	46372073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_46345886_46347082_46347422_46349876_46349961_46357698_46357740_46360296_46360424_46366710_46366748_46370113
ENSMUSG00000020400.18_32	chr11	-	1824	14	FSM	ENSMUSG00000020400.18	ENST00000522226.5	1839	14	10	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTGAGTCGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	54831702	54807626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_41	chr11	-	1586	13	FSM	ENSMUSG00000020400.18	ENST00000523200.5	1607	13	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAGCAAAGGTGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	54831663	54808093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020400.18_9	chr11	-	2689	16	FSM	ENSMUSG00000020400.18	ENST00000521591.6	2705	16	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAAGATCAACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	54831700	54801626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54802398_54806322_54806414_54807621_54807814_54808081_54808148_54808625_54808752_54809431_54809564_54811586_54811716_54814923_54815056_54815201_54815268_54817529_54817620_54819920_54820045_54821590_54821686_54824814_54825007_54827286_54827368_54830323_54830562_54831536
ENSMUSG00000020401.7_0	chr11	+	1826	3	FSM	ENSMUSG00000020401.7	ENST00000302938.4	1844	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGGAAGCAGCCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	46295578	46298704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_46296254_46297321_46297454_46297685
ENSMUSG00000020402.12_0	chr11	+	2004	9	FSM	ENSMUSG00000020402.12	ENSMUST00000102758.8	2022	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTCATCCTCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	52251696	52280216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_52251980_52265125_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274905_52276409_52276561_52278242_52278301_52279258
ENSMUSG00000020402.12_7	chr11	+	833	8	FSM	ENSMUSG00000020402.12	ENST00000603132.1	844	8	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTCAAGCATAAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	52265131	52279336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_52265196_52265744_52265795_52267217_52267371_52267474_52267528_52274676_52274903_52276409_52276561_52278242_52278301_52279258
ENSMUSG00000020407.14_0	chr11	+	1149	9	FSM	ENSMUSG00000020407.14	ENSMUST00000101525.9	1157	9	0	8	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACATTGTGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	9068106	9086162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_9068163_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020407.14_1	chr11	+	1245	9	FSM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	2	5	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACATTGTGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	9068508	9086162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_9068661_9069373_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020407.14_2	chr11	+	1087	8	ISM	ENSMUSG00000020407.14	ENSMUST00000164791.8	1252	9	873	5	873	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACATTGTGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	9069379	9086162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_9069450_9075632_9075699_9079487_9079606_9081629_9081789_9083233_9083349_9084721_9084932_9085163_9085311_9085960
ENSMUSG00000020409.11_0	chr11	+	3616	16	FSM	ENSMUSG00000020409.11	ENSMUST00000020681.10	3625	16	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATTTAGCCATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	43324585	43338799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43324647_43328171_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUSG00000020409.11_5	chr11	+	3550	15	FSM	ENSMUSG00000020409.11	ENSMUST00000178622.3	3566	15	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATTTAGCCATGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	43328176	43338799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43328358_43328949_43329104_43329630_43329712_43329979_43330145_43331437_43331507_43332047_43332096_43332272_43332405_43332649_43332748_43332857_43332926_43333366_43333507_43334100_43334263_43335552_43335658_43336010_43336083_43336185_43336300_43336838
ENSMUSG00000020412.17_0	chr11	+	2643	20	FSM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4587751	4633383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUSG00000020412.17_1	chr11	+	4837	19	FSM	ENSMUSG00000020412.17	ENSMUST00000109930.3	4844	19	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGCCAGAGTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4587748	4635694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4587823_4590382_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUSG00000020412.17_5	chr11	+	2569	19	ISM	ENSMUSG00000020412.17	ENSMUST00000070257.14	2650	20	2639	2	2639	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTCTGTGACATGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4590385	4633383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_4590481_4596561_4596721_4597062_4597234_4599739_4599870_4606268_4606337_4608214_4608326_4609271_4609385_4614228_4614304_4618314_4618423_4618579_4618649_4618861_4618937_4620275_4620463_4622282_4622498_4623327_4623448_4629251_4629346_4629430_4629553_4630082_4630183_4631438_4631519_4632906
ENSMUSG00000020413.12_0	chr11	-	4630	8	FSM	ENSMUSG00000020413.12	ENSMUST00000020683.10	4640	8	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATTACTTGGAATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8961189	8943144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_8946933_8948636_8948757_8950076_8950177_8955988_8956064_8957493_8957605_8960240_8960418_8960496_8960625_8961058
ENSMUSG00000020415.17_0	chr11	-	734	6	FSM	ENSMUSG00000020415.17	ENSMUST00000020687.15	741	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTAACCAACCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	43317078	43311083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409_43316509_43317027
ENSMUSG00000020415.17_1	chr11	-	676	5	FSM	ENSMUSG00000020415.17	ENSMUST00000121638.8	948	5	289	-17	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTTAACCAACCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	43316501	43311083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316409
ENSMUSG00000020415.17_10	chr11	-	652	5	FSM	ENSMUSG00000020415.17	ENST00000352433.10	664	5	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGCATTTGTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	43316505	43311115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43311236_43311933_43312093_43313719_43313814_43315545_43315725_43316405
ENSMUSG00000020420.9_0	chr7	+	3498	5	FSM	ENSMUSG00000020420.9	ENSMUST00000205534.2	3511	5	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATCTTTAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	27560010	27580238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27560182_27561961_27562015_27562813_27562941_27564994_27565094_27577190
ENSMUSG00000020422.15_0	chr11	-	7475	31	FSM	ENSMUSG00000020422.15	ENSMUST00000020695.13	7483	31	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8614535	8381659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8614478
ENSMUSG00000020422.15_1	chr11	-	7877	31	FSM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8574875	8381659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739_8565852_8574416
ENSMUSG00000020422.15_2	chr11	-	7410	30	ISM	ENSMUSG00000020422.15	ENSMUST00000239091.2	7897	31	9044	8	9044	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTAATGAAGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8565843	8381659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_8384639_8385715_8385743_8385845_8385915_8387103_8387273_8393934_8394013_8394945_8395024_8395645_8395742_8398689_8398822_8400069_8400157_8400854_8401496_8403078_8403251_8428224_8428306_8428392_8428511_8429504_8429666_8442092_8443338_8468198_8468304_8469122_8469189_8469440_8469571_8480871_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8499671_8499722_8529082_8529122_8550554_8550593_8565739
ENSMUSG00000020422.15_6	chr11	-	851	10	FSM	ENSMUSG00000020422.15	ENST00000458317.6	856	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGAGTACCCACAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8550594	8480874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8529052_8529122_8550554
ENSMUSG00000020422.15_7	chr11	-	795	9	ISM	ENSMUSG00000020422.15	ENST00000458317.6	856	10	21486	8	21486	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGTGAGTACCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	8529108	8480877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_8480948_8481703_8481765_8482396_8482510_8488002_8488087_8491166_8491232_8495228_8495352_8497270_8497322_8498931_8499104_8529052
ENSMUSG00000020423.7_0	chr1	-	2729	2	FSM	ENSMUSG00000020423.7	ENSMUST00000020692.7	2743	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCATCCCCTCTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	134006850	134002913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134005442_134006649
ENSMUSG00000020424.4_0	chr11	+	1553	9	FSM	ENSMUSG00000020424.4	ENSMUST00000020699.4	1574	9	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGAGTGACAGCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	4168245	4172409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4168427_4168947_4169019_4170107_4170293_4170374_4170508_4170682_4170807_4171145_4171260_4171423_4171507_4171600_4171696_4171842
ENSMUSG00000020427.12_0	chr11	-	2389	5	FSM	ENSMUSG00000020427.12	ENSMUST00000020702.11	2421	5	16	16	16	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATTTAAAAAAAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	7163881	7156101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_7157507_7158368_7158509_7159458_7159579_7160018_7160246_7163384
ENSMUSG00000020430.13_0	chr11	+	2899	15	FSM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCCTCATTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3913979	3929997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_1	chr11	+	2916	15	FSM	ENSMUSG00000020430.13	ENSMUST00000109985.8	2923	15	0	7	0	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCCTCATTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3913974	3929997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3914061_3918262_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923436_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020430.13_8	chr11	+	2820	14	ISM	ENSMUSG00000020430.13	ENSMUST00000020705.5	2911	15	4286	7	4286	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTCCTCATTGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	3918260	3929997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_3918343_3919432_3919587_3920624_3920735_3923196_3923369_3923448_3923539_3925528_3925646_3925739_3925815_3926034_3926122_3926287_3926419_3926771_3926898_3927015_3927201_3927625_3927784_3927870_3928033_3928826
ENSMUSG00000020432.13_0	chr11	-	1908	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109990.8	1914	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATGGACGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	3881960	3867197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881926
ENSMUSG00000020432.13_1	chr11	-	1942	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109989.10	1949	10	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATGGACGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	3882043	3867197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3881975
ENSMUSG00000020432.13_2	chr11	-	1868	9	ISM	ENSMUSG00000020432.13	ENSMUST00000109992.8	1945	10	208	6	208	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATGGACGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	3881581	3867197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392
ENSMUSG00000020432.13_3	chr11	-	1937	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109991.8	1943	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATGGACGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	3882078	3867197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881585_3882012
ENSMUSG00000020432.13_4	chr11	-	2007	10	FSM	ENSMUSG00000020432.13	ENSMUST00000109993.9	2027	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGACATGGACGTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	3882145	3867197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3867710_3869289_3869406_3872010_3872177_3873395_3873583_3873701_3873875_3874940_3875103_3875999_3876170_3877389_3877583_3881392_3881588_3882012
ENSMUSG00000020435.18_0	chr11	-	3418	13	FSM	ENSMUSG00000020435.18	ENST00000403222.7	3431	13	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2692	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCCTGTTGCAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3770038	3653733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3655208_3655388_3655616_3661693_3661870_3661957_3662054_3662125_3662230_3662458_3662580_3664470_3664717_3665087_3665235_3665496_3665552_3667096_3667215_3667791_3667987_3676318_3676576_3769836
ENSMUSG00000020436.18_0	chr11	-	3567	9	FSM	ENSMUSG00000020436.18	ENST00000641017.1	3581	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTTACAATAAAAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	41891149	41801062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_41803513_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537_41862759_41865653_41865722_41867361_41867514_41891053
ENSMUSG00000020436.18_2	chr11	-	5131	9	FSM	ENSMUSG00000020436.18	ENST00000639384.1	5142	9	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACACAAAAAAATGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	41891432	41801089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_41804821_41807110_41807317_41811224_41811378_41858360_41858499_41859622_41859706_41862537_41862759_41865653_41865722_41867361_41867514_41891053
ENSMUSG00000020439.18_0	chr11	-	3031	20	FSM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3487385	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322
ENSMUSG00000020439.18_1	chr11	-	3319	21	FSM	ENSMUSG00000020439.18	ENSMUST00000020721.15	3335	21	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3489280	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3489111
ENSMUSG00000020439.18_2	chr11	-	2939	19	FSM	ENSMUSG00000020439.18	ENST00000347557.6	2945	19	1	5	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3487386	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322
ENSMUSG00000020439.18_4	chr11	-	3007	20	FSM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3487385	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3467828_3470847_3470917_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322
ENSMUSG00000020439.18_5	chr11	-	2943	19	ISM	ENSMUSG00000020439.18	ENST00000358743.5	3013	20	3865	4	3865	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3483522	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_3467828_3470847_3470917_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374
ENSMUSG00000020439.18_6	chr11	-	2964	19	ISM	ENSMUSG00000020439.18	ENST00000619644.4	3037	20	3868	4	3868	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3483519	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_3467828_3471816_3471969_3472460_3472579_3472770_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3477427_3477521_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374
ENSMUSG00000020439.18_9	chr11	-	3369	22	FSM	ENSMUSG00000020439.18	ENSMUST00000170588.8	3386	22	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGATCCTGACTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3489279	3467526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3467828_3470751_3470917_3471816_3471969_3472460_3472579_3472774_3472949_3474632_3474727_3474882_3474946_3475041_3475207_3476164_3476241_3476327_3476481_3479439_3479613_3479766_3480283_3480369_3480442_3481044_3481118_3481201_3481523_3482410_3482509_3482597_3482677_3482760_3482855_3483374_3483524_3487322_3487437_3487554_3487606_3489111
ENSMUSG00000020440.14_0	chr6	+	1105	6	FSM	ENSMUSG00000020440.14	ENSMUST00000020717.12	1116	6	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGGTGTTGTCTGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	28423568	28426600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_28423755_28424288_28424370_28424720_28424831_28425171_28425244_28425737_28425864_28426070
ENSMUSG00000020441.7_0	chr11	+	1270	7	FSM	ENSMUSG00000020441.7	ENSMUST00000020719.7	1285	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTAGAGTGTATATTAT	NA	NA	NA	NA	NA	NA	NA	NA	59099155	59101558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59099500_59099645_59099692_59099794_59099878_59099953_59100027_59100133_59100220_59100798_59100931_59101052
ENSMUSG00000020444.20_0	chr11	-	1059	8	FSM	ENSMUSG00000020444.20	ENSMUST00000170202.9	1078	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACTGAATTATAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59082769	59074710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59075014_59075261_59075348_59075854_59075940_59076019_59076159_59076767_59076865_59077225_59077268_59077599_59077714_59082576
ENSMUSG00000020447.6_0	chr11	-	3788	17	FSM	ENSMUSG00000020447.6	ENST00000289547.8	3803	17	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTATCTGGGTGAGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	6179348	6164020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6164174_6164259_6164374_6164525_6164758_6165020_6165231_6167477_6167534_6167706_6167834_6168233_6168362_6168551_6168743_6171824_6171915_6172141_6172280_6173028_6173157_6173320_6173436_6174137_6174321_6174771_6174901_6175119_6175293_6175628_6175730_6177828
ENSMUSG00000020448.17_0	chr11	-	2768	7	FSM	ENSMUSG00000020448.17	ENSMUST00000077078.12	2787	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACTGTGAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3402350	3365987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3402208
ENSMUSG00000020448.17_1	chr11	-	2883	8	FSM	ENSMUSG00000020448.17	ENSMUST00000064364.3	2906	8	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTACTGTGAGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3402346	3365987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3368088_3369861_3369980_3375281_3375337_3376565_3376679_3378883_3378903_3382399_3382621_3388204_3388324_3402208
ENSMUSG00000020448.17_4	chr11	-	784	4	FSM	ENSMUSG00000020448.17	ENST00000266252.8	800	4	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCCTCCACTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	3382563	3367604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3368088_3369861_3369980_3378883_3378903_3382399
ENSMUSG00000020451.18_0	chr11	-	3677	15	FSM	ENSMUSG00000020451.18	ENSMUST00000101642.10	3693	15	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAGAGATGACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	3321368	3294263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3320968
ENSMUSG00000020451.18_1	chr11	-	3499	16	FSM	ENSMUSG00000020451.18	ENSMUST00000101638.4	3514	16	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATAGAGATGACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	3359167	3294263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297749_3298593_3298660_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109_3308299_3308994_3309105_3310450_3310587_3342916_3343017_3359045
ENSMUSG00000020451.18_7	chr11	-	1374	11	FSM	ENSMUSG00000020451.18	ENST00000422830.1	1390	11	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGGGACTCGCCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	3308283	3295761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3295885_3296234_3296393_3297051_3297108_3297573_3297671_3300391_3300449_3300641_3300774_3302290_3302378_3303276_3303464_3305272_3305470_3305810_3305917_3308109
ENSMUSG00000020453.18_0	chr11	+	1895	6	FSM	ENSMUSG00000020453.18	ENSMUST00000134089.8	1904	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGATATCTCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	3239280	3259074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3239348_3243279_3243344_3244455_3244548_3249033_3249206_3256287_3256361_3257647
ENSMUSG00000020453.18_1	chr11	+	2910	3	FSM	ENSMUSG00000020453.18	ENSMUST00000094471.10	2930	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAACATTTGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	3240003	3245420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3241885_3243279_3243344_3244455
ENSMUSG00000020453.18_2	chr11	+	3684	5	FSM	ENSMUSG00000020453.18	ENSMUST00000110043.8	3702	5	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGATATCTCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	3240001	3259074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256222_3256361_3257647
ENSMUSG00000020453.18_5	chr11	+	3087	4	FSM	ENSMUSG00000020453.18	ENSMUST00000057089.13	3118	4	22	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATGATATCTCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	3240460	3259074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3257647
ENSMUSG00000020453.18_6	chr11	+	3167	5	FSM	ENSMUSG00000020453.18	ENSMUST00000093402.12	3173	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATATCTCTGCCTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	3240456	3259077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3241885_3243279_3243344_3249033_3249206_3256287_3256361_3257647
ENSMUSG00000020454.18_0	chr11	+	3558	18	FSM	ENSMUSG00000020454.18	ENSMUST00000020734.11	3565	18	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3152398	3194581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3152557_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUSG00000020454.18_3	chr11	+	3589	19	FSM	ENSMUSG00000020454.18	ENSMUST00000110049.8	3614	19	18	7	18	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3152680	3194581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3152798_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUSG00000020454.18_5	chr11	+	3697	18	FSM	ENSMUSG00000020454.18	ENSMUST00000110048.8	3712	18	9	6	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3153029	3194581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3153327_3153629_3153751_3163259_3163334_3165591_3165720_3170243_3170531_3171092_3171295_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180102_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUSG00000020454.18_8	chr11	+	2940	16	FSM	ENSMUSG00000020454.18	ENSMUST00000120721.9	2952	16	7	5	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGATATGGCTGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3153636	3194581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3153751_3163259_3163334_3165591_3165720_3174631_3174808_3177394_3177531_3177705_3177886_3179868_3180066_3183987_3184060_3184461_3184646_3185580_3185661_3186213_3186354_3189400_3189486_3190894_3191028_3192376_3192719_3193182_3193351_3193850
ENSMUSG00000020455.17_0	chr11	+	3514	5	FSM	ENSMUSG00000020455.17	ENSMUST00000108809.8	3522	5	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTCATGTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58868918	58882273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879661
ENSMUSG00000020455.17_4	chr11	+	2241	6	FSM	ENSMUSG00000020455.17	ENSMUST00000093061.7	2251	6	5	5	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCATGTTCTCTGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	58868946	58882278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879550_58879574_58879654_58879756_58881012
ENSMUSG00000020455.17_8	chr11	+	1396	5	FSM	ENSMUSG00000020455.17	ENST00000284551.11	1410	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACCCAAACCTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	58869071	58881555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58869471_58872066_58872163_58872818_58873050_58879628_58879756_58881012
ENSMUSG00000020456.18_1	chr11	+	4120	23	FSM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGCCTGCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6241632	6306635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6241694_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_5	chr11	+	4065	23	FSM	ENSMUSG00000020456.18	ENSMUST00000101554.9	4106	23	24	17	22	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	6241689	6306561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6241770_6246951_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_6	chr11	+	4066	23	FSM	ENSMUSG00000020456.18	ENSMUST00000081894.5	4114	23	17	31	17	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	6242621	6306561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6242715_6246951_6247200_6263787_6263980_6266764_6266856_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020456.18_9	chr11	+	4056	22	ISM	ENSMUSG00000020456.18	ENSMUST00000003461.15	4127	23	5322	7	4350	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCAGCCTGCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6246954	6306635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_6247200_6263787_6263980_6266977_6267081_6284532_6284649_6288557_6288713_6289108_6289256_6289837_6289929_6290442_6290623_6292494_6292624_6296514_6296695_6297097_6297251_6297828_6297932_6298234_6298364_6298657_6298809_6299099_6299228_6299314_6299494_6299841_6299914_6300605_6300735_6302125_6302199_6304928_6305093_6305290_6305446_6305553
ENSMUSG00000020457.14_0	chr11	-	1535	9	FSM	ENSMUSG00000020457.14	ENSMUST00000020741.12	1546	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTGAGGTTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3216383	3199907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3200366_3202159_3202283_3202643_3202812_3204511_3204643_3206542_3206713_3209305_3209376_3212488_3212665_3214766_3214891_3216268
ENSMUSG00000020458.17_0	chr11	+	4602	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102843.10	4618	9	7	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTTACCTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29642953	29692907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29643694_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020458.17_14	chr11	+	4044	9	FSM	ENSMUSG00000020458.17	ENSMUST00000102841.8	4060	9	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTTACCTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29643780	29692907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29643963_29655534_29655592_29656409_29658771_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020458.17_19	chr11	+	1754	7	FSM	ENSMUSG00000020458.17	ENSMUST00000060992.6	1773	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTTACCTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29668572	29692907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29668883_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020458.17_3	chr11	+	2244	8	FSM	ENSMUSG00000020458.17	ENSMUST00000102842.10	2257	8	4	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTTACCTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29642950	29692907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29643694_29655534_29655592_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020458.17_7	chr11	+	3593	7	FSM	ENSMUSG00000020458.17	ENSMUST00000078830.11	3615	7	14	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTATCTGTGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	29642960	29694323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29643694_29683632_29683841_29686359_29686499_29690980_29691051_29691499_29691547_29691694_29691754_29691986
ENSMUSG00000020459.15_1	chr11	+	2394	14	FSM	ENSMUSG00000020459.15	ENSMUST00000020749.13	2425	14	0	31	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29476447	29495248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29476488_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_19	chr11	+	2350	13	ISM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	3476	0	3476	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29479932	29495248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020459.15_4	chr11	+	2725	14	FSM	ENSMUSG00000020459.15	ENSMUST00000093239.11	2741	14	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAAAAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29476472	29495248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29476844_29479928_29480155_29480580_29480693_29483225_29483398_29483831_29483993_29485089_29485267_29486832_29486973_29488668_29488794_29490067_29490273_29490608_29490862_29491340_29491482_29492344_29492510_29494269_29494411_29494912
ENSMUSG00000020460.16_0	chr11	-	773	6	FSM	ENSMUSG00000020460.16	ENSMUST00000102845.11	791	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGTACTTAGTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29498099	29495853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680_29497746_29497840
ENSMUSG00000020460.16_1	chr11	-	615	5	FSM	ENSMUSG00000020460.16	ENSMUST00000102844.4	637	5	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCGTACTTAGTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29497846	29495853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29496030_29496290_29496423_29496702_29496789_29497205_29497261_29497680
ENSMUSG00000020462.15_1	chr11	-	1633	10	FSM	ENSMUSG00000020462.15	ENSMUST00000020754.10	1664	10	10	21	10	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTAAAAATAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	29197399	29171552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29171986_29172433_29172584_29172743_29172884_29175856_29175960_29179907_29179960_29180585_29180674_29184357_29184473_29194058_29194161_29195085_29195151_29197014
ENSMUSG00000020463.16_0	chr11	+	2385	12	FSM	ENSMUSG00000020463.16	ENSMUST00000102856.9	2410	12	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAAAATCACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	29122900	29159627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316
ENSMUSG00000020463.16_2	chr11	+	5110	16	FSM	ENSMUSG00000020463.16	ENSMUST00000020755.12	5125	16	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGATTCACGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29122897	29170790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29123448_29124672_29124729_29132446_29132546_29137950_29138575_29144572_29144651_29146173_29146291_29147092_29147210_29148792_29148925_29150700_29150804_29152866_29152909_29155545_29155705_29159316_29159487_29161115_29161256_29161606_29161792_29163593_29163797_29168455
ENSMUSG00000020464.16_0	chr11	+	2690	28	FSM	ENSMUSG00000020464.16	ENSMUST00000020756.9	2707	28	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAACAACTGTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	29080756	29111820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29080919_29082844_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087160_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020464.16_24	chr11	+	2174	27	FSM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATCTAACTCTAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	29082842	29111460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29082906_29083851_29083927_29084599_29084706_29085513_29085564_29087095_29087164_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020464.16_48	chr11	+	2112	26	ISM	ENSMUSG00000020464.16	ENST00000450418.1	2184	27	1015	3	1015	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAACTCTAACCCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	29083854	29111464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_29083927_29084599_29084706_29085513_29085564_29087095_29087164_29087252_29087301_29088155_29088270_29088417_29088605_29089223_29089276_29089947_29090006_29091223_29091321_29091663_29091767_29095428_29095500_29096795_29096833_29097297_29097365_29097443_29097534_29098277_29098332_29103231_29103339_29104143_29104216_29104301_29104366_29104815_29104900_29105714_29105799_29106836_29106944_29107024_29107081_29109324_29109404_29110157_29110206_29111327
ENSMUSG00000020467.16_0	chr11	+	2013	11	FSM	ENSMUSG00000020467.16	ENSMUST00000020759.12	2037	11	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGAGAATCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	28803215	28876731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_28803325_28804464_28804555_28817465_28817515_28817652_28818040_28860609_28860733_28864587_28864708_28865660_28865781_28866849_28866970_28871402_28871527_28871610_28871807_28876156
ENSMUSG00000020471.12_0	chr11	-	1637	11	FSM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTGTTCACTTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	5828286	5822182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712_5826990_5828191
ENSMUSG00000020471.12_1	chr11	-	1538	10	ISM	ENSMUSG00000020471.12	ENSMUST00000102922.10	1646	11	1302	8	1302	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGAACCTTGTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	5826990	5822187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5822419_5822669_5822772_5823026_5823155_5823408_5823567_5823688_5823770_5824023_5824223_5824314_5824430_5824760_5824885_5825053_5825176_5826712
ENSMUSG00000020472.15_1	chr11	-	4055	10	FSM	ENSMUSG00000020472.15	ENSMUST00000013262.15	4064	10	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATAGTTTTCTTCTATCCT	NA	NA	NA	NA	NA	NA	NA	NA	59397464	59376348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59378644_59382940_59383055_59383996_59384108_59384540_59384674_59390369_59390447_59393745_59393927_59394209_59394637_59394973_59395081_59396653_59396789_59396989
ENSMUSG00000020472.15_3	chr11	-	1784	7	FSM	ENSMUSG00000020472.15	ENST00000294753.8	1804	7	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	3187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCAGGGTGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	59394625	59377896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59378644_59382940_59383055_59383996_59384087_59384514_59384674_59390369_59390447_59393745_59393927_59394209
ENSMUSG00000020473.14_0	chr11	+	3813	21	FSM	ENSMUSG00000020473.14	ENSMUST00000102923.10	3831	21	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACCACCTTCCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5811955	5822079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5812399_5813938_5814278_5814823_5814896_5815016_5815089_5815199_5815311_5815384_5815454_5816432_5816511_5816919_5817001_5817097_5817152_5817639_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ENSMUSG00000020473.14_18	chr11	+	2522	12	FSM	ENSMUSG00000020473.14	ENSMUST00000109829.2	2541	12	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACACCACCTTCCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5817611	5822079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5817750_5817819_5817960_5818296_5818382_5818474_5818620_5818730_5818817_5819064_5819189_5819413_5819611_5819706_5819887_5820075_5820428_5820513_5820654_5820752_5820853_5821244
ENSMUSG00000020474.12_0	chr11	-	2895	11	FSM	ENSMUSG00000020474.12	ENSMUST00000020767.4	2924	11	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTTTTACAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5787987	5777860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5779116_5779310_5779395_5779476_5779726_5779825_5779929_5780067_5780201_5781659_5781781_5784741_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
ENSMUSG00000020474.12_1	chr11	-	1283	9	FSM	ENSMUSG00000020474.12	ENST00000395831.7	1301	9	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGAGAAATGCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	5787740	5779030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5779141_5779290_5779395_5779476_5779726_5780067_5780201_5784757_5784814_5785415_5785587_5785700_5785800_5786193_5786375_5787560
ENSMUSG00000020475.4_0	chr11	-	833	3	FSM	ENSMUSG00000020475.4	ENSMUST00000020768.4	840	3	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCGCCACGTTTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	5753729	5751642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5751840_5752998_5753180_5753274
ENSMUSG00000020476.15_0	chr11	+	1986	13	FSM	ENSMUSG00000020476.15	ENSMUST00000109845.8	2001	13	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCCTGGCTCAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	5738499	5750626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747286_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020476.15_15	chr11	+	2283	13	FSM	ENSMUSG00000020476.15	ENSMUST00000102928.5	2295	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGATATAACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	5738538	5750959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5738643_5741791_5741848_5743649_5743763_5744236_5744312_5745447_5745595_5746745_5746824_5747023_5747176_5747283_5747336_5747626_5747721_5748015_5748112_5748215_5748326_5749233_5749340_5749859
ENSMUSG00000020477.11_0	chr11	-	984	4	FSM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAACAGGAAATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	5657685	5653991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5654733_5657297_5657410_5657486_5657556_5657623
ENSMUSG00000020477.11_1	chr11	-	915	3	ISM	ENSMUSG00000020477.11	ENSMUST00000154330.2	995	4	139	9	139	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAACAGGAAATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	5657548	5653991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5654733_5657297_5657410_5657486
ENSMUSG00000020482.5_0	chr11	-	3356	5	FSM	ENSMUSG00000020482.5	ENSMUST00000020776.5	3372	5	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTTAAAGTATCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	5492181	5478896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5481534_5484242_5484381_5484764_5484990_5491372_5491424_5491876
ENSMUSG00000020483.15_0	chr11	-	2468	3	FSM	ENSMUSG00000020483.15	ENSMUST00000020775.9	2476	3	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGGGTTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87878352	87870351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_87872397_87874697_87874837_87878068
ENSMUSG00000020483.15_1	chr11	-	2159	2	FSM	ENSMUSG00000020483.15	ENSMUST00000178105.3	2187	2	27	1	27	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGGGTTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87874811	87870351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_87872397_87874697
ENSMUSG00000020483.15_2	chr11	-	2442	3	FSM	ENSMUSG00000020483.15	ENSMUST00000107923.10	2443	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTTGGGGTTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87877411	87870351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_87872397_87874697_87874837_87877153
ENSMUSG00000020484.20_0	chr11	+	2105	5	FSM	ENSMUSG00000020484.20	ENSMUST00000063084.16	2129	5	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	3393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAACACAGCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5470667	5475878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5471201_5471922_5472020_5473332_5473468_5474238_5474385_5474684
ENSMUSG00000020485.15_0	chr11	+	689	5	FSM	ENSMUSG00000020485.15	ENSMUST00000093955.12	706	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATACTTAAAGGGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	87628388	87634437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87628495_87628992_87629100_87633621_87633678_87633883_87633938_87634071
ENSMUSG00000020486.20_0	chr11	+	1567	12	FSM	ENSMUSG00000020486.20	ENST00000412945.7	1583	12	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTATTCCCTGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	87460989	87481248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87461133_87474143_87474441_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480781_87480882_87481141
ENSMUSG00000020486.20_4	chr11	+	1308	11	FSM	ENSMUSG00000020486.20	ENST00000579371.5	1327	11	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAAATAAACTAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	87471906	87481337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87472052_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479679_87479793_87479912_87480000_87480103_87480293_87480391_87480481_87480645_87480834_87480882_87481141
ENSMUSG00000020486.20_7	chr11	+	1752	9	FSM	ENSMUSG00000020486.20	ENST00000426861.5	1778	9	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGGAAATAAACTAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	87474156	87481337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87474441_87474746_87474841_87475224_87475312_87475943_87476068_87479543_87479912_87480000_87480103_87480293_87480391_87480481_87480882_87481141
ENSMUSG00000020491.16_0	chr11	+	3854	5	FSM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTAAGTGTTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	58758049	58774110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58758136_58759640_58759833_58767519_58767647_58769601_58769695_58770754
ENSMUSG00000020491.16_3	chr11	+	3764	4	ISM	ENSMUSG00000020491.16	ENSMUST00000073924.10	3866	5	1598	9	1598	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACTTTCTAAGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	58759639	58774105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_58759833_58767519_58767647_58769601_58769695_58770754
ENSMUSG00000020492.12_0	chr11	+	3029	4	FSM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATCTAGCCTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	87000061	87015455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87000131_87006929_87007017_87008493_87008671_87012759
ENSMUSG00000020492.12_1	chr11	+	2960	3	ISM	ENSMUSG00000020492.12	ENSMUST00000020794.6	3037	4	6870	6	6870	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATCTAGCCTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	87006929	87015455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_87007017_87008493_87008671_87012759
ENSMUSG00000020493.9_0	chr11	-	3818	10	FSM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATGCTTCCAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	86999534	86979984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834_86996968_86999466
ENSMUSG00000020493.9_2	chr11	-	3739	9	ISM	ENSMUSG00000020493.9	ENSMUST00000051395.9	3824	10	2578	6	2578	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATGCTTCCAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	86996956	86979984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_86982692_86987788_86987886_86987960_86988021_86989488_86989605_86990200_86990300_86992207_86992472_86994012_86994136_86994365_86994517_86996834
ENSMUSG00000020495.14_0	chr11	-	3200	4	FSM	ENSMUSG00000020495.14	ENSMUST00000020801.14	3218	4	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAATGTATACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	86977594	86968569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86968977_86970991_86971865_86974425_86974572_86975820
ENSMUSG00000020496.11_0	chr11	-	1936	4	FSM	ENSMUSG00000020496.11	ENSMUST00000094151.6	1949	4	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	5976	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTCTGTTTCCATACC	NA	NA	NA	NA	NA	NA	NA	NA	58829733	58823117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58824223_58824832_58825058_58827965_58828059_58829220
ENSMUSG00000020513.16_2	chr11	+	1031	6	FSM	ENSMUSG00000020513.16	ENST00000539018.5	1046	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGGTAGTCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	86435832	86457947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86436057_86445898_86446131_86448550_86448716_86452061_86452203_86456510_86456695_86457862
ENSMUSG00000020513.16_6	chr11	+	929	5	FSM	ENSMUSG00000020513.16	ENST00000376094.8	945	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGAGCTGTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	86440157	86458018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86440298_86443613_86443831_86445898_86446131_86456510_86456695_86457862
ENSMUSG00000020514.9_0	chr11	+	716	7	FSM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCTGTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58062486	58070385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58062540_58062619_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020514.9_12	chr11	+	615	5	ISM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	1371	6	1371	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCTGTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58063857	58070385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020514.9_7	chr11	+	660	6	ISM	ENSMUSG00000020514.9	ENSMUST00000020820.2	722	7	136	6	136	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATCTGTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	58062622	58070385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_58062669_58063858_58063977_58066102_58066169_58066957_58067036_58068042_58068113_58070103
ENSMUSG00000020515.14_0	chr11	+	2079	7	FSM	ENSMUSG00000020515.14	ENSMUST00000108843.8	2099	7	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTGGCATGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57995067	58009413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57995175_58000381_58000593_58002085_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264
ENSMUSG00000020515.14_5	chr11	+	1014	6	FSM	ENSMUSG00000020515.14	ENST00000517876.5	1034	6	13	7	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATGAAGTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58002097	58009417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58002280_58003877_58004040_58004775_58004921_58006090_58006202_58008264_58008541_58009279
ENSMUSG00000020516.16_0	chr11	-	5515	15	FSM	ENSMUSG00000020516.16	ENSMUST00000154617.8	5531	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAGATAACAGTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	86435621	86389702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_14	chr11	-	5296	17	FSM	ENSMUSG00000020516.16	ENST00000393021.7	5314	17	11	7	-10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAACATAAAATAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86435641	86389847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86391610_86391818_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86434756_86434872_86435391
ENSMUSG00000020516.16_81	chr11	-	1935	15	FSM	ENSMUSG00000020516.16	ENST00000406116.7	1950	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTTCCTGCCTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	86435562	86392158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86392724_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86423597_86423667_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020516.16_93	chr11	-	1911	14	FSM	ENSMUSG00000020516.16	ENST00000443572.6	1932	14	12	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTGATGATGTCAAATA	NA	NA	NA	NA	NA	NA	NA	NA	86435574	86393190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86393789_86395091_86395205_86397616_86397725_86402414_86402493_86402650_86402714_86403631_86403740_86404125_86404217_86404372_86404464_86406916_86407018_86408408_86408467_86410717_86410866_86424851_86424973_86426236_86426287_86435391
ENSMUSG00000020519.6_1	chr11	+	646	3	FSM	ENSMUSG00000020519.6	ENST00000426761.2	670	3	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTTTAAGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	57692874	57701088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57693116_57698864_57698949_57700767
ENSMUSG00000020519.6_2	chr11	+	661	3	FSM	ENSMUSG00000020519.6	ENST00000440364.6	685	3	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGACTTTAAGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	57692874	57701088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57693116_57698849_57698949_57700767
ENSMUSG00000020520.15_0	chr11	+	4701	12	FSM	ENSMUSG00000020520.15	ENSMUST00000066987.14	4715	12	13	1	-10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTTGTCACCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	57536280	57678339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57656385_57656572_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ENSMUSG00000020520.15_5	chr11	+	1718	3	FSM	ENSMUSG00000020520.15	ENSMUST00000108846.2	1745	3	22	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAGAAACGGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	57536312	57617732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57536544_57612120_57612224_57616348
ENSMUSG00000020520.15_8	chr11	+	1688	11	FSM	ENSMUSG00000020520.15	ENST00000377661.2	1703	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTTAGACCTTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	57536321	57675553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57536544_57612120_57612224_57616348_57616488_57627803_57627971_57660317_57660502_57662293_57662412_57668456_57668565_57671875_57672098_57673031_57673149_57674515_57674666_57675395
ENSMUSG00000020521.8_0	chr11	+	4433	9	FSM	ENSMUSG00000020521.8	ENSMUST00000020827.7	4452	9	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAATTTGCATTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	86375494	86389844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86375626_86376886_86377332_86377481_86377559_86379892_86379994_86381183_86381338_86382504_86382664_86383986_86384053_86386053_86386156_86386646
ENSMUSG00000020522.14_0	chr11	+	4814	3	FSM	ENSMUSG00000020522.14	ENSMUST00000108849.8	4827	3	0	13	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAATTCAGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57409489	57424628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57409539_57418684_57419116_57420294
ENSMUSG00000020522.14_1	chr11	+	4827	3	FSM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAATTCAGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57409512	57424628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57409575_57418684_57419116_57420294
ENSMUSG00000020522.14_2	chr11	+	4767	2	ISM	ENSMUSG00000020522.14	ENSMUST00000020830.14	4839	3	9174	8	9174	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAGAGTTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	57418686	57424632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_57419116_57420294
ENSMUSG00000020523.15_0	chr11	-	2551	14	FSM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	57409443	57373824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920_57405115_57409398
ENSMUSG00000020523.15_2	chr11	-	2499	13	ISM	ENSMUSG00000020523.15	ENSMUST00000020831.13	2557	14	4336	6	-94	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAAGCGTGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	57405107	57373824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920
ENSMUSG00000020523.15_29	chr11	-	1253	12	FSM	ENSMUSG00000020523.15	ENST00000351797.9	1267	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTAGTGGCTCCGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	57405005	57373903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_57373956_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404920
ENSMUSG00000020523.15_40	chr11	-	1741	14	FSM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	0	24	0	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATTATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57409429	57374641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899_57405115_57409398
ENSMUSG00000020523.15_42	chr11	-	1704	13	ISM	ENSMUSG00000020523.15	ENSMUST00000108850.2	1765	14	4324	21	-92	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTATTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57405105	57374638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_57374967_57378392_57378447_57380935_57381009_57382745_57382886_57383829_57383953_57390551_57390632_57396059_57396184_57397662_57397822_57398318_57398454_57400203_57400293_57404067_57404161_57404461_57404562_57404899
ENSMUSG00000020524.17_0	chr11	+	5513	16	FSM	ENSMUSG00000020524.17	ENSMUST00000036315.16	5546	16	25	8	25	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTACCTACCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56902660	57221062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_56902942_56905979_56906118_57076618_57076859_57080478_57080664_57091951_57092006_57108597_57108760_57111843_57112012_57119746_57119852_57127719_57127831_57128772_57128980_57133574_57133946_57174335_57174535_57180073_57180322_57201433_57201549_57208491_57208627_57218268
ENSMUSG00000020524.17_17	chr11	+	5025	15	ISM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	1634	1	1634	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCCTTTTATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	56905986	57220862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_56906118_57076618_57076859_57080478_57080664_57091951_57092006_57108597_57108760_57111843_57112012_57119746_57119852_57127719_57127831_57128772_57128980_57133574_57133946_57174335_57174535_57180073_57180322_57200594_57200710_57208491_57208627_57218268
ENSMUSG00000020524.17_3	chr11	+	5356	16	FSM	ENSMUSG00000020524.17	ENSMUST00000151045.3	5361	16	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATTACCTACCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56903872	57221062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_56903997_56905979_56906118_57076618_57076859_57080478_57080664_57091951_57092006_57108597_57108760_57111843_57112012_57119746_57119852_57127719_57127831_57128772_57128980_57133574_57133946_57174335_57174535_57180073_57180322_57201433_57201549_57208491_57208627_57218268
ENSMUSG00000020524.17_7	chr11	+	5084	16	FSM	ENSMUSG00000020524.17	ENST00000518783.1	5085	16	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGGCCTTTTATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	56904352	57220862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_56904405_56905979_56906118_57076618_57076859_57080478_57080664_57091951_57092006_57108597_57108760_57111843_57112012_57119746_57119852_57127719_57127831_57128772_57128980_57133574_57133946_57174335_57174535_57180073_57180322_57200594_57200710_57208491_57208627_57218268
ENSMUSG00000020525.18_0	chr11	+	2880	6	FSM	ENSMUSG00000020525.18	ENSMUST00000020835.16	2899	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTATGTTGCTGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	85202082	85237886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_85202750_85217689_85217919_85223076_85223202_85227890_85228082_85230379_85230623_85236461
ENSMUSG00000020526.13_0	chr11	-	983	5	FSM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATATTATTGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84807185	84801783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924_84806957_84807081
ENSMUSG00000020526.13_1	chr11	-	879	4	ISM	ENSMUSG00000020526.13	ENSMUST00000103195.5	998	5	236	8	236	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATATTATTGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	84806956	84801783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_84802475_84804047_84804129_84805036_84805112_84806924
ENSMUSG00000020527.15_0	chr11	+	4064	25	FSM	ENSMUSG00000020527.15	ENSMUST00000093969.11	4091	25	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAATTACAGTTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	84771000	84802052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_84771338_84773411_84773554_84776027_84776167_84776496_84776646_84778879_84778994_84782901_84783035_84784150_84784221_84785375_84785479_84786093_84786191_84786303_84786381_84787946_84788038_84788374_84788547_84790202_84790277_84791021_84791144_84791299_84791414_84791667_84791845_84792176_84792330_84792925_84793034_84793982_84794054_84796365_84796470_84798061_84798229_84798331_84798462_84799045_84799132_84800079_84800380_84801218
ENSMUSG00000020528.15_0	chr11	-	1757	11	FSM	ENSMUSG00000020528.15	ENSMUST00000168115.8	1771	11	7	7	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	61652907	61620482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61652779
ENSMUSG00000020528.15_1	chr11	-	1824	12	FSM	ENSMUSG00000020528.15	ENSMUST00000004955.14	1837	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTCTGTATGTGGATAG	NA	NA	NA	NA	NA	NA	NA	NA	61652878	61620482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61621129_61622250_61622398_61625833_61625905_61627741_61627891_61631771_61631828_61635770_61635887_61639737_61639911_61643692_61643760_61646235_61646289_61647020_61647172_61647407_61647504_61652779
ENSMUSG00000020530.15_0	chr11	-	2935	14	FSM	ENSMUSG00000020530.15	ENSMUST00000172405.8	2950	14	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTAGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84761557	84723194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761463
ENSMUSG00000020530.15_1	chr11	-	3015	14	FSM	ENSMUSG00000020530.15	ENSMUST00000108081.9	3034	14	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTAGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84761604	84723194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732240_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUSG00000020530.15_2	chr11	-	3037	14	FSM	ENSMUSG00000020530.15	ENSMUST00000168434.8	3056	14	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGGCTAGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84761632	84723194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84749265_84749365_84751370_84751625_84753063_84753145_84760702_84760899_84761430
ENSMUSG00000020530.15_22	chr11	-	2464	14	ISM	ENSMUSG00000020530.15	ENSMUST00000018547.9	2478	15	575	4	575	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACCTCATTCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	84760897	84723690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_84724040_84725160_84725410_84727190_84727340_84727424_84727551_84728666_84728815_84730806_84731002_84731086_84731262_84732246_84732451_84744879_84744994_84745080_84745207_84749265_84749365_84751370_84751625_84753063_84753145_84760702
ENSMUSG00000020532.19_1	chr11	+	9483	56	FSM	ENSMUSG00000020532.19	ENSMUST00000103201.8	9513	56	24	6	24	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGCCACCGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	84063971	84292471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_84064382_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020532.19_77	chr11	+	7441	55	ISM	ENSMUSG00000020532.19	ENST00000614428.4	7547	56	13258	0	-2361	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGGGTCGTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	84083902	84290837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020532.19_9	chr11	+	7539	56	FSM	ENSMUSG00000020532.19	ENST00000614428.4	7547	56	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATAGGGTCGTGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	84070652	84290837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_84070753_84083904_84083952_84086263_84086514_84104983_84105117_84106659_84106799_84113967_84114078_84115269_84115352_84116959_84117059_84119745_84119853_84122476_84122588_84129651_84129862_84134103_84134275_84136032_84136195_84136519_84136684_84140239_84140391_84142057_84142162_84147509_84147592_84148001_84148148_84150148_84150300_84151449_84151585_84152335_84152483_84153221_84153411_84154097_84154199_84154864_84154954_84161142_84161268_84167359_84167474_84168621_84168736_84169691_84169782_84171217_84171337_84181113_84181138_84183716_84183861_84184722_84184820_84185763_84185872_84190893_84190951_84191246_84191292_84197942_84197985_84202092_84202309_84203552_84203709_84206599_84206804_84211351_84211508_84213308_84213456_84229139_84229410_84232752_84232851_84236791_84236913_84237530_84237642_84254489_84254634_84255152_84255274_84259496_84259594_84262326_84262424_84263404_84263541_84271327_84271506_84273257_84273371_84282335_84282491_84283041_84283213_84288884_84289022_84290385
ENSMUSG00000020534.15_0	chr11	-	2836	12	FSM	ENSMUSG00000020534.15	ENSMUST00000018744.15	2858	12	14	8	14	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTACACTCCTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	60702077	60678937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60685661_60685779_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088_60695235_60697771_60697869_60701729
ENSMUSG00000020534.15_7	chr11	-	1225	9	FSM	ENSMUSG00000020534.15	ENST00000354098.7	1242	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTGACAGGAACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60695225	60679977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60680143_60680421_60680533_60680971_60681089_60683774_60683898_60688350_60688564_60689419_60689502_60692253_60692415_60692741_60692858_60695088
ENSMUSG00000020536.13_0	chr11	+	4289	22	FSM	ENSMUSG00000020536.13	ENSMUST00000052346.10	4303	22	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	NA	NA	NA	NA	NA	NA	NA	60590556	60605006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746_60603868_60603954
ENSMUSG00000020536.13_4	chr11	+	4256	21	FSM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	NA	NA	NA	NA	NA	NA	NA	60590676	60605006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60590768_60593609_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUSG00000020536.13_6	chr11	+	4166	20	ISM	ENSMUSG00000020536.13	ENSMUST00000108719.4	4268	21	2938	6	2938	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACATCTGCACACATG	NA	NA	NA	NA	NA	NA	NA	NA	60593608	60605006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_60593708_60595494_60595577_60595676_60595808_60596792_60596949_60597018_60597182_60597263_60597400_60597577_60597633_60597784_60597940_60598014_60598239_60598406_60598475_60599369_60599524_60599614_60599720_60600260_60600554_60600806_60600955_60601112_60601267_60602161_60602458_60602825_60603091_60603204_60603320_60603447_60603555_60603746
ENSMUSG00000020537.10_0	chr11	+	1768	13	FSM	ENSMUSG00000020537.10	ENSMUST00000018568.4	1788	13	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGACTTAGGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	60345428	60359572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358565_60358889
ENSMUSG00000020537.10_11	chr11	+	1076	13	FSM	ENSMUSG00000020537.10	ENST00000395726.8	1087	13	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTAGTCACGACACCT	NA	NA	NA	NA	NA	NA	NA	NA	60345499	60358967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60345570_60347376_60347538_60350267_60350358_60350853_60350915_60351612_60351704_60352147_60352221_60352339_60352431_60352999_60353098_60353383_60353461_60354959_60355049_60355658_60355718_60358510_60358549_60358889
ENSMUSG00000020538.16_0	chr11	-	4276	19	FSM	ENSMUSG00000020538.16	ENSMUST00000020846.8	4299	19	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCGATACACACAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	60111413	60089920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60090978_60091251_60091364_60091460_60091662_60092071_60092238_60092405_60092539_60092621_60092732_60092984_60093088_60093587_60093757_60093924_60094092_60094171_60094434_60094624_60094804_60094896_60095093_60095212_60095428_60095947_60096060_60096681_60096904_60096998_60097137_60097220_60097400_60097663_60098084_60111278
ENSMUSG00000020541.13_10	chr11	-	1420	15	FSM	ENSMUSG00000020541.13	ENST00000572158.5	1430	15	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGGTAAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	90578419	90537669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90537726_90540173_90540241_90540601_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565625_90574060_90574140_90575887_90575973_90578338
ENSMUSG00000020541.13_11	chr11	-	1477	15	FSM	ENSMUSG00000020541.13	ENST00000445275.6	1491	15	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGGTAAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	90578482	90537669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90537726_90540173_90540241_90540601_90540688_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUSG00000020541.13_26	chr11	-	1377	14	FSM	ENSMUSG00000020541.13	ENST00000348161.8	1390	14	9	4	-7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGGTAAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	90578440	90537669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90537726_90540173_90540241_90540601_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90578338
ENSMUSG00000020541.13_74	chr11	-	739	7	FSM	ENSMUSG00000020541.13	ENST00000572405.5	745	7	6	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCCAGGGACAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	90578421	90561907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575968_90578338
ENSMUSG00000020541.13_8	chr11	-	1263	13	FSM	ENSMUSG00000020541.13	ENST00000536554.5	1271	13	4	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGGTAAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	90578405	90537669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90537726_90540173_90540241_90540601_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90578338
ENSMUSG00000020541.13_9	chr11	-	1429	15	FSM	ENSMUSG00000020541.13	ENST00000575882.6	1435	15	2	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTAAGGTAAGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	90578407	90537669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90537726_90540173_90540241_90540601_90540715_90542736_90542789_90547176_90547277_90548539_90548658_90548973_90549035_90552581_90552716_90561909_90562027_90563658_90563764_90564489_90564613_90565495_90565646_90574060_90574140_90575887_90575973_90578338
ENSMUSG00000020544.15_0	chr11	+	1219	4	FSM	ENSMUSG00000020544.15	ENSMUST00000020851.15	1224	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGGCCTGACAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	90529003	90535757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_90529379_90531202_90531359_90534478_90534605_90535195
ENSMUSG00000020546.15_0	chr11	-	5905	17	ISM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	15839	12	15820	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATACTAAACAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90513071	90367329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017
ENSMUSG00000020546.15_1	chr11	-	5973	18	FSM	ENSMUSG00000020546.15	ENSMUST00000143203.8	5985	18	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATACTAAACAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	90528910	90367329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_90371541_90385427_90385486_90426305_90426440_90428736_90428787_90430991_90431109_90439636_90439814_90462547_90462614_90466075_90466166_90483157_90483250_90485570_90485668_90491011_90491107_90496778_90496858_90497793_90498011_90498170_90498278_90510008_90510142_90512480_90512609_90513017_90513088_90528858
ENSMUSG00000020547.6_0	chr12	-	1853	12	FSM	ENSMUSG00000020547.6	ENSMUST00000020856.6	1871	12	12	6	-9	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTGTATATGGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	36206812	36141839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206666
ENSMUSG00000020547.6_1	chr12	-	1845	12	FSM	ENSMUSG00000020547.6	ENST00000433922.6	1854	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTATATGG	NA	NA	NA	NA	NA	NA	NA	NA	36206794	36141844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_36142309_36142965_36143089_36154260_36154400_36157494_36157642_36159703_36159875_36163966_36164077_36168985_36169122_36170717_36170784_36173933_36174038_36179990_36180168_36184889_36184955_36206651
ENSMUSG00000020549.15_14	chr11	+	2452	24	FSM	ENSMUSG00000020549.15	ENST00000338034.9	2468	24	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTCTAAGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	64869938	64892049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874546_64876398_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUSG00000020549.15_5	chr11	+	2873	24	FSM	ENSMUSG00000020549.15	ENSMUST00000101049.9	2884	24	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCCTGCTTCAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	64869906	64892422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_64870158_64870543_64870595_64870732_64870804_64871433_64871499_64872442_64872501_64873581_64873651_64874419_64874552_64876388_64876448_64878096_64878156_64878233_64878307_64878857_64878971_64880178_64880275_64883046_64883186_64883264_64883351_64885061_64885181_64886131_64886229_64888693_64888833_64889166_64889206_64889333_64889444_64889962_64890063_64890143_64890265_64890511_64890591_64891121_64891267_64891820
ENSMUSG00000020553.9_0	chr11	-	2700	6	FSM	ENSMUSG00000020553.9	ENSMUST00000020864.9	2723	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAATAAGTGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	89893706	89873499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_89875583_89876918_89876987_89878021_89878194_89879520_89879601_89881896_89882015_89893527
ENSMUSG00000020561.9_0	chr12	+	4315	4	FSM	ENSMUSG00000020561.9	ENSMUST00000020877.9	4325	4	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTCTTGTACAGCGAC	NA	NA	NA	NA	NA	NA	NA	NA	33479641	33491389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33479908_33483503_33483646_33486934_33487144_33487691
ENSMUSG00000020564.18_0	chr12	+	1606	3	FSM	ENSMUSG00000020564.18	ENSMUST00000077456.13	1624	3	12	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTCTAAATGCCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	33197703	33301139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33197915_33267710_33267816_33299849
ENSMUSG00000020564.18_1	chr12	+	1662	4	FSM	ENSMUSG00000020564.18	ENSMUST00000110824.9	1675	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTCTAAATGCCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	33197716	33301139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33197915_33198431_33198501_33267710_33267816_33299849
ENSMUSG00000020564.18_13	chr12	+	2222	9	ISM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	11628	5	10514	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAAGCCAGTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	33375909	33422920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_33376133_33391919_33392195_33394888_33394972_33395836_33396088_33408654_33408848_33412971_33413094_33416970_33417914_33420981_33421057_33422863
ENSMUSG00000020564.18_7	chr12	+	2322	10	FSM	ENSMUSG00000020564.18	ENST00000477775.5	2336	10	9	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAAGCCAGTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	33364290	33422920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33364391_33375909_33376133_33391919_33392195_33394888_33394972_33395836_33396088_33408654_33408848_33412971_33413094_33416970_33417914_33420981_33421057_33422863
ENSMUSG00000020566.20_0	chr12	-	1389	13	FSM	ENSMUSG00000020566.20	ENSMUST00000221129.2	1425	13	31	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGAGTCTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	17374700	17334730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_17334950_17335113_17335247_17338083_17338182_17341429_17341524_17341628_17341722_17344145_17344215_17344676_17344776_17347729_17347822_17351121_17351217_17358272_17358359_17371598_17371667_17373338_17373512_17374630
ENSMUSG00000020570.16_0	chr12	+	4987	6	FSM	ENSMUSG00000020570.16	ENSMUST00000076698.13	4999	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTTTTTTAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	33003901	33029859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33004018_33004286_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUSG00000020570.16_1	chr12	+	1997	5	FSM	ENSMUSG00000020570.16	ENSMUST00000020885.13	2019	5	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGAAGTGAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33004192	33026891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_33004359_33015371_33015500_33017534_33017743_33024126_33024319_33025588
ENSMUSG00000020571.14_0	chr12	+	2150	13	FSM	ENSMUSG00000020571.14	ENSMUST00000057288.7	2175	13	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAACTAACGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	17316562	17334763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17316653_17320396_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020571.14_22	chr12	+	2061	12	ISM	ENSMUSG00000020571.14	ENSMUST00000239402.2	2125	13	3800	8	3800	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTAACTAACGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	17320395	17334763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_17320539_17323945_17324004_17324384_17324512_17327198_17327306_17328514_17328646_17328836_17328952_17329579_17329721_17330378_17330464_17330567_17330641_17330911_17331071_17333200_17333298_17333938
ENSMUSG00000020572.9_0	chr12	+	4508	11	FSM	ENSMUSG00000020572.9	ENSMUST00000020886.9	4527	11	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTTTAGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32870340	32903336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32896704_32896846_32898615_32898751_32900421
ENSMUSG00000020572.9_2	chr12	+	2479	10	FSM	ENSMUSG00000020572.9	ENST00000679951.1	2497	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTATGGACATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	32870491	32901599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_32870626_32880165_32880323_32883030_32883135_32884900_32885030_32888297_32888457_32889149_32889287_32890923_32891150_32892683_32892804_32898615_32898751_32900421
ENSMUSG00000020572.9_5	chr12	+	959	5	FSM	ENSMUSG00000020572.9	ENST00000491027.6	975	5	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAATTGAGGACTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	32870509	32891341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_32870626_32884900_32885030_32888297_32888457_32889149_32889287_32890923
ENSMUSG00000020573.18_0	chr12	-	3577	11	FSM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCAGTGCGAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32258666	32226388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_32226856_32242078_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990_32255998_32258598
ENSMUSG00000020573.18_1	chr12	-	3506	10	ISM	ENSMUSG00000020573.18	ENST00000440650.6	3582	11	2675	2	-9	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTCAGTGCGAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32255994	32226388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_32226856_32242078_32242237_32243597_32243710_32244692_32244824_32245617_32245709_32247183_32247331_32249086_32249191_32250498_32250725_32250833_32250900_32253990
ENSMUSG00000020576.11_0	chr12	+	7211	52	FSM	ENSMUSG00000020576.11	ENSMUST00000042953.10	7234	52	16	7	16	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGGATGCCCTTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	13319149	13633805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_13319266_13321164_13321220_13322657_13322695_13323788_13323867_13324175_13324224_13329388_13329433_13335183_13335318_13338671_13338806_13339882_13339982_13350093_13350233_13356904_13356974_13360176_13360306_13367698_13367763_13371645_13371840_13372856_13373115_13374269_13374396_13378336_13378489_13380617_13380759_13381024_13381104_13385831_13385937_13386274_13386412_13402783_13402868_13406824_13406979_13410931_13411118_13412442_13412617_13424696_13424831_13427434_13427498_13429647_13429771_13440925_13441029_13443303_13443534_13455374_13455488_13458194_13458309_13463528_13463643_13464784_13464943_13465645_13465733_13482897_13483063_13491467_13491582_13491862_13491948_13503053_13503131_13503485_13503624_13519841_13520072_13524127_13524239_13532386_13532638_13533710_13534046_13563370_13563590_13568945_13569149_13570695_13570786_13584380_13584577_13608612_13608753_13610837_13610977_13616129_13616259_13633391
ENSMUSG00000020580.11_0	chr12	+	7632	33	FSM	ENSMUSG00000020580.11	ENSMUST00000020904.8	7644	33	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTTTTCCTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	16944900	17037817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17005670_17005683_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020580.11_1	chr12	+	7621	32	NIC	ENSMUSG00000020580.11	novel	7644	33	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGCATCTTTTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	16944895	17037813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_+_16945332_16976939_16977022_16978934_16979036_16990403_16990542_16992694_16992956_16998458_16998604_17000572_17000712_17002496_17002589_17003261_17003422_17004907_17004969_17007226_17007307_17007461_17007511_17008119_17008256_17008340_17008433_17008628_17008876_17009402_17009510_17011616_17011777_17015011_17015173_17015468_17015654_17016624_17016695_17018211_17018316_17018580_17018768_17021049_17021144_17021225_17021321_17022661_17022842_17022981_17023151_17024842_17024914_17025470_17025560_17026034_17026114_17027542_17027805_17027889_17028104_17034638
ENSMUSG00000020585.5_0	chr12	+	1760	7	FSM	ENSMUSG00000020585.5	ENSMUST00000020909.4	1773	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGCCTCATGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	8971673	8988739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8972295_8981627_8981749_8984695_8984773_8984865_8984989_8985986_8986083_8986696_8986796_8988116
ENSMUSG00000020590.17_0	chr12	+	3659	23	FSM	ENSMUSG00000020590.17	ENSMUST00000163677.3	3681	23	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATAATTGAGCAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35097201	35184677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35183513
ENSMUSG00000020590.17_2	chr12	+	6211	26	FSM	ENSMUSG00000020590.17	ENSMUST00000048519.17	6231	26	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACAGTTCTGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35097194	35197468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_35097411_35128898_35129012_35132867_35132971_35135937_35136028_35136861_35136984_35141361_35141484_35141567_35141670_35142823_35142913_35148228_35148313_35150537_35150677_35151019_35151109_35153039_35153140_35155105_35155300_35156711_35156817_35157422_35157556_35160622_35160661_35162433_35162504_35169764_35169905_35172916_35173025_35174428_35174540_35182019_35182182_35183307_35183380_35188024_35188171_35188398_35188468_35190166_35190280_35194087
ENSMUSG00000020591.12_0	chr12	+	1298	4	FSM	ENSMUSG00000020591.12	ENSMUST00000111064.3	1524	4	-32	258	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAACAAACAATGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	16703452	16709970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_16704125_16706597_16706872_16708365_16708457_16709709
ENSMUSG00000020592.15_0	chr12	+	3137	5	FSM	ENSMUSG00000020592.15	ENSMUST00000020911.14	3157	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1907	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGACACTTTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	8821333	8843706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8821702_8839406_8839489_8840384_8840867_8841290_8841427_8841637
ENSMUSG00000020593.17_0	chr12	-	5508	20	ISM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	8878	8	8874	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCCAGTAGAATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	16630893	16585677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704
ENSMUSG00000020593.17_1	chr12	-	5564	21	FSM	ENSMUSG00000020593.17	ENSMUST00000067124.6	5581	21	7	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGCCCAGTAGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	16639764	16585679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_16588574_16590914_16591019_16591714_16591830_16594644_16594798_16596721_16596809_16597486_16597636_16598877_16599005_16603949_16604030_16608409_16608503_16610982_16611053_16612363_16612458_16613622_16613814_16614526_16614621_16615391_16615699_16618390_16618521_16621164_16621264_16623660_16623787_16626948_16627257_16629882_16629979_16630704_16630906_16639718
ENSMUSG00000020594.15_0	chr12	+	4977	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111123.9	4984	21	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTTTGCCTATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	8724133	8801447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_1	chr12	+	5874	20	FSM	ENSMUSG00000020594.15	ENSMUST00000178015.8	5874	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	8724133	8802581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8724171_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_10	chr12	+	5826	19	ISM	ENSMUSG00000020594.15	ENSMUST00000178015.8	5874	20	23957	11	2	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTGTCAAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8748090	8802570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_17	chr12	+	5991	19	ISM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	7846	5	7846	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTGTCAAGAGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	8755934	8802572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_5	chr12	+	6270	21	FSM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	33	8	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAATATCCCTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	8724256	8802553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8724481_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_7	chr12	+	6208	21	FSM	ENSMUSG00000020594.15	ENSMUST00000168361.8	6226	21	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTGCCTGATTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	8724698	8802581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8724827_8748090_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794750_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_8	chr12	+	6060	20	FSM	ENSMUSG00000020594.15	ENST00000338086.9	6069	20	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTGTCAAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8748090	8802570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778858_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020594.15_9	chr12	+	6064	20	ISM	ENSMUSG00000020594.15	ENSMUST00000111122.9	6311	21	23866	-9	1	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCTGTCAAGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8748089	8802570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8748160_8755932_8756042_8759321_8759510_8760158_8760326_8763359_8763631_8763843_8763938_8768987_8769114_8771664_8771808_8774046_8774180_8778633_8778778_8778855_8779150_8783272_8783510_8793760_8794029_8794336_8794467_8794614_8794744_8797156_8797295_8798110_8798237_8798397_8798520_8798760_8798954_8799588
ENSMUSG00000020598.17_1	chr12	+	5761	25	FSM	ENSMUSG00000020598.17	ENST00000351718.8	5774	25	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	4607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCCCCCCCCCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	44579256	44647499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_44579443_44584033_44584140_44586223_44586421_44587734_44587858_44591507_44591679_44592161_44592219_44594014_44594127_44596656_44596842_44598087_44598220_44606444_44606589_44609209_44609322_44610746_44610914_44611009_44611158_44613070_44613196_44615326_44615429_44616992_44617191_44617288_44617360_44618297_44618524_44618984_44619101_44620602_44620808_44622658_44622782_44623386_44623564_44636890_44637023_44637763_44637843_44645132
ENSMUSG00000020599.14_0	chr11	-	2378	19	FSM	ENSMUSG00000020599.14	ENST00000262406.10	2402	19	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATAAAAGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	109188921	109116211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109116603_109117951_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139867_109140852_109140883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109188763
ENSMUSG00000020599.14_8	chr11	-	1981	17	FSM	ENSMUSG00000020599.14	ENST00000443584.7	1996	17	12	3	-7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGACAGAGGGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	109188899	109117921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109118431_109126725_109126844_109128919_109129006_109130279_109130419_109131675_109131764_109137278_109137395_109138889_109139004_109139804_109139883_109150652_109150725_109159748_109159831_109164101_109164179_109166086_109166146_109166404_109166457_109166645_109166753_109167395_109167447_109172274_109172372_109188763
ENSMUSG00000020601.9_0	chr12	-	4175	3	FSM	ENSMUSG00000020601.9	ENSMUST00000020922.8	4198	3	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACTAAAAGTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	15866773	15841737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_15844078_15859696_15859990_15865231
ENSMUSG00000020604.14_0	chr11	+	3213	12	FSM	ENSMUSG00000020604.14	ENSMUST00000106697.8	3232	12	5	14	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAACTCACAAATGCATT	NA	NA	NA	NA	NA	NA	NA	NA	109376436	109464142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109376584_109380593_109381477_109408067_109408256_109412482_109412531_109416208_109416321_109418571_109418710_109424734_109424932_109426082_109426164_109438839_109438949_109448776_109448898_109454007_109454099_109463044
ENSMUSG00000020605.10_0	chr12	+	2946	7	FSM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCCAGAATTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	8363432	8393812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8363498_8367784_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020605.10_2	chr12	+	2882	6	ISM	ENSMUSG00000020605.10	ENSMUST00000020927.10	2959	7	4352	12	4352	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCCAGAATTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	8367783	8393812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8367951_8371518_8371727_8373869_8374102_8386237_8386396_8387632_8387769_8391831
ENSMUSG00000020607.8_0	chr12	-	4143	2	FSM	ENSMUSG00000020607.8	ENSMUST00000020926.8	4164	2	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCAGTCCTTTCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	14202040	14196836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_14200762_14201822
ENSMUSG00000020608.8_0	chr12	+	5580	27	FSM	ENSMUSG00000020608.8	ENSMUST00000020931.6	5603	27	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAATTAATTAAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	11315898	11369775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311_11335411_11339128_11339276_11339637_11339727_11339892_11340058_11340713_11340893_11341526_11341732_11344485_11344601_11344923_11345085_11347150_11347287_11348262_11348344_11349259_11349431_11350571_11350710_11351522_11351669_11356078_11356205_11359199_11359306_11364607_11364761_11366619_11366718_11367770
ENSMUSG00000020608.8_24	chr12	+	3357	10	FSM	ENSMUSG00000020608.8	ENSMUST00000218866.2	3373	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACTTTGTATGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	11316139	11337649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_11316290_11321729_11321873_11323994_11324113_11326260_11326367_11329605_11329743_11330341_11330404_11332360_11332442_11333071_11333174_11335098_11335219_11335311
ENSMUSG00000020610.18_0	chr11	+	2804	9	FSM	ENSMUSG00000020610.18	ENSMUST00000092500.11	2816	9	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGAAGCTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109316774	109328965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109316857_109317311_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUSG00000020610.18_17	chr11	+	734	4	FSM	ENSMUSG00000020610.18	ENST00000359783.8	753	4	10	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACAGAGTGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	109319635	109325571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109319911_109320749_109320879_109324715_109324880_109325405
ENSMUSG00000020610.18_19	chr11	+	911	5	FSM	ENSMUSG00000020610.18	ENST00000577866.5	929	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATACAGAGTGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	109319636	109325571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109319911_109320489_109320668_109320749_109320879_109324715_109324880_109325405
ENSMUSG00000020610.18_8	chr11	+	2970	8	FSM	ENSMUSG00000020610.18	ENSMUST00000238825.2	2997	8	18	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGAAGCTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109317063	109328965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109317402_109317795_109317924_109319627_109319911_109320489_109320664_109320749_109320879_109324715_109324880_109325405_109325583_109327388
ENSMUSG00000020611.15_0	chr11	+	898	3	FSM	ENSMUSG00000020611.15	ENSMUST00000106702.4	914	3	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTACTTGTATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	109253664	109271293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109254083_109256361_109256589_109271040
ENSMUSG00000020611.15_1	chr11	+	6144	4	FSM	ENSMUSG00000020611.15	ENSMUST00000020930.14	6160	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGACCTGGTAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	109253664	109292187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109254083_109256361_109256589_109283171_109283223_109286739
ENSMUSG00000020612.17_0	chr11	+	3494	12	FSM	ENSMUSG00000020612.17	ENSMUST00000106677.8	3513	12	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAACGAATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	109540241	109560474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109540354_109541266_109541451_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020612.17_10	chr11	+	3342	11	FSM	ENSMUSG00000020612.17	ENSMUST00000049527.7	3359	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAACGAATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	109541755	109560474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_109541900_109544604_109544788_109550824_109550996_109551860_109551953_109552113_109552176_109553101_109553149_109553774_109553934_109555584_109555646_109556690_109556813_109557469_109557552_109558255
ENSMUSG00000020614.14_0	chr11	-	2526	11	FSM	ENSMUSG00000020614.14	ENSMUST00000020938.8	2541	11	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGGATAACTGGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109613074	109563758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109564391_109565448_109565509_109565931_109566014_109566668_109566779_109567979_109568161_109568596_109568713_109569181_109569275_109573662_109573742_109575463_109575515_109576168_109576354_109612137
ENSMUSG00000020621.7_0	chr12	+	1449	2	FSM	ENSMUSG00000020621.7	ENSMUST00000020947.7	1480	2	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTTTCAGTGTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	10440796	10445556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_10441227_10444537
ENSMUSG00000020621.7_6	chr12	+	1211	3	FSM	ENSMUSG00000020621.7	ENST00000381249.4	1231	3	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTACAATGATGAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	10440848	10494970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_10441227_10444537_10445340_10494939
ENSMUSG00000020623.12_0	chr11	+	2060	12	FSM	ENSMUSG00000020623.12	ENSMUST00000020949.12	2068	12	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGGCATAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	110289952	110404464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_110290252_110373364_110373432_110380970_110381020_110381587_110381702_110383338_110383459_110383721_110383839_110385120_110385173_110387164_110387293_110388722_110388801_110390208_110390349_110397531_110397578_110403614
ENSMUSG00000020628.17_0	chr12	-	3216	12	FSM	ENSMUSG00000020628.17	ENSMUST00000168129.10	3230	12	13	1	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGGAGACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	28800458	28740627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800327
ENSMUSG00000020628.17_1	chr12	-	3370	12	FSM	ENSMUSG00000020628.17	ENSMUST00000020954.15	3377	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGAGGAGACATGAG	NA	NA	NA	NA	NA	NA	NA	NA	28800445	28740627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_28741557_28741757_28741846_28742492_28742594_28747142_28747242_28751534_28751609_28753524_28753598_28761870_28761984_28771050_28771190_28772361_28772476_28787731_28787849_28796297_28797536_28800160
ENSMUSG00000020629.13_0	chr12	+	1636	4	FSM	ENSMUSG00000020629.13	ENSMUST00000020957.13	1652	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTTGGTCTCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	28725239	28732168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_28725372_28727776_28727897_28729388_28729569_28730964
ENSMUSG00000020630.10_0	chr12	+	1439	8	FSM	ENSMUSG00000020630.10	ENSMUST00000020959.9	1455	8	6	10	6	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACACAGAACACATCTA	NA	NA	NA	NA	NA	NA	NA	NA	28699606	28709578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_28699816_28702023_28702140_28703061_28703224_28705583_28705684_28707270_28707326_28707631_28707717_28708169_28708295_28708991
ENSMUSG00000020634.13_1	chr12	-	2682	7	FSM	ENSMUSG00000020634.13	ENSMUST00000020962.12	2696	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCTGGGTGTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4957696	4929036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4930772_4933822_4933982_4935720_4935859_4941314_4941422_4944537_4944680_4952219_4952273_4957348
ENSMUSG00000020635.9_0	chr12	-	975	4	FSM	ENSMUSG00000020635.9	ENSMUST00000020964.7	976	4	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGTTGTGGGAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4891591	4883174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4883796_4884738_4884852_4888168_4888217_4891398
ENSMUSG00000020635.9_1	chr12	-	919	5	FSM	ENSMUSG00000020635.9	ENST00000452109.1	927	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCGTCTTCCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	4891494	4883193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4883796_4884738_4884852_4887439_4887496_4888164_4888217_4891398
ENSMUSG00000020640.11_0	chr12	+	5963	39	FSM	ENSMUSG00000020640.11	ENSMUST00000062580.8	5987	39	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTAATCCTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	4643023	4763942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ENSMUSG00000020640.11_19	chr12	+	4976	38	FSM	ENSMUSG00000020640.11	ENSMUST00000219007.2	4977	38	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCTGGGGAAGCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4663274	4763196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ENSMUSG00000020640.11_21	chr12	+	4943	37	ISM	ENSMUSG00000020640.11	ENSMUST00000219007.2	4977	38	11618	1	11618	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCCTGGGGAAGCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4674892	4763196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ENSMUSG00000020640.11_7	chr12	+	6065	40	FSM	ENSMUSG00000020640.11	ENSMUST00000220311.2	6080	40	3	12	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTTTCAAAGCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4643010	4763950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4643233_4663242_4663306_4674890_4674984_4676529_4676594_4677832_4677997_4679544_4679752_4679867_4679965_4680636_4680777_4682373_4682438_4682935_4683074_4683476_4683563_4684534_4684798_4685580_4685731_4686546_4686688_4687738_4687827_4689654_4689795_4690912_4690994_4699982_4700120_4702350_4702488_4703445_4703544_4708014_4708191_4708441_4708572_4711858_4712065_4714536_4714623_4716159_4716327_4721272_4721319_4721401_4721524_4722736_4722834_4723415_4723608_4747141_4747264_4750319_4750427_4751181_4751366_4756259_4756359_4756964_4757133_4757529_4757746_4758112_4758235_4758944_4759028_4761952_4762037_4762466_4762641_4763039
ENSMUSG00000020644.10_0	chr12	-	1257	3	FSM	ENSMUSG00000020644.10	ENSMUST00000020974.7	1270	3	8	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAATGCCGGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25146083	25143804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_25144576_25145309_25145374_25145661
ENSMUSG00000020644.10_1	chr12	-	1954	4	FSM	ENSMUSG00000020644.10	ENSMUST00000221761.2	1969	4	8	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAATGCCGGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25147131	25143804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_25144576_25145309_25145374_25145661_25146253_25146603
ENSMUSG00000020644.10_3	chr12	-	947	1	FSM	ENSMUSG00000020644.10	ENSMUST00000222667.2	958	1	9	2	9	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAACAGAAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	25146077	25145130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_25145100_25146100
ENSMUSG00000020646.18_0	chr12	+	2321	13	FSM	ENSMUSG00000020646.18	ENSMUST00000110942.11	2351	13	4	26	4	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAACAAAAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	24881625	25009847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24881774_24928189_24928336_24932715_24932794_24974197_24974294_24984565_24984622_24989292_24989348_24996504_24996686_24998186_24998380_25001384_25001489_25004184_25004250_25005275_25005409_25007571_25007724_25008933
ENSMUSG00000020647.11_0	chr12	-	6722	20	FSM	ENSMUSG00000020647.11	ENST00000395856.3	6735	20	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATGCGCTATGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4404492	4297347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4299748_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360
ENSMUSG00000020647.11_9	chr12	-	7315	23	FSM	ENSMUSG00000020647.11	ENSMUST00000085814.5	7329	23	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAACCTCATGGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	4527178	4297371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4299751_4299835_4299891_4303656_4303747_4309211_4309396_4313433_4313609_4317606_4318010_4320746_4320849_4324693_4325009_4325172_4325342_4328101_4328220_4340813_4340995_4344909_4346249_4347475_4347624_4356423_4356565_4363025_4363122_4365685_4365866_4372867_4373046_4385780_4385879_4389017_4389185_4394396_4394503_4404360_4404510_4466670_4466806_4526771
ENSMUSG00000020648.4_0	chr12	-	1751	7	FSM	ENSMUSG00000020648.4	ENSMUST00000020977.4	1773	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCAAGACGGTATGACT	NA	NA	NA	NA	NA	NA	NA	NA	31704811	31690056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31690944_31691500_31691728_31692762_31692886_31696619_31696738_31698764_31698887_31702289_31702441_31704688
ENSMUSG00000020649.12_0	chr12	+	2177	10	FSM	ENSMUSG00000020649.12	ENSMUST00000020980.12	2193	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGTCCTTTGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	24758248	24764138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24758445_24758558_24758634_24758937_24759085_24759323_24759441_24760355_24760490_24761445_24761541_24761667_24761802_24762659_24762765_24762859_24762974_24763078
ENSMUSG00000020650.16_0	chr12	-	6149	8	FSM	ENSMUSG00000020650.16	ENSMUST00000177962.9	6155	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTATTTTGACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	31684634	31640971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261_31684380_31684603
ENSMUSG00000020650.16_1	chr12	-	6114	7	FSM	ENSMUSG00000020650.16	ENSMUST00000020979.9	1949	7	221	-4386	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCTATTTTGACCAC	NA	NA	NA	NA	NA	NA	NA	NA	31684377	31640973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31646377_31650642_31650744_31667073_31667180_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020650.16_12	chr12	-	826	6	FSM	ENSMUSG00000020650.16	ENST00000465919.5	836	6	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCATTGATATATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	31680886	31646131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791
ENSMUSG00000020650.16_6	chr12	-	1920	7	FSM	ENSMUSG00000020650.16	ENST00000005259.9	1939	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCACCAGAGGTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	31684370	31645152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31646377_31650642_31650744_31667073_31667172_31674113_31674250_31676724_31676876_31680791_31680893_31684261
ENSMUSG00000020652.18_0	chr12	-	4329	7	FSM	ENSMUSG00000020652.18	ENSMUST00000140975.8	4348	7	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAATCTGCCTTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4284280	4261671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4281515_4281683_4283530_4283658_4283751
ENSMUSG00000020652.18_1	chr12	-	2011	6	FSM	ENSMUSG00000020652.18	ENSMUST00000020981.12	2037	6	23	3	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACACCTGCAGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4283942	4263484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4264631_4265258_4265431_4266518_4266779_4267207_4267323_4283530_4283658_4283751
ENSMUSG00000020653.13_0	chr12	+	4064	4	FSM	ENSMUSG00000020653.13	ENSMUST00000020982.7	4086	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGAGTGATGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	24701285	24712779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24701566_24703557_24703810_24704841_24705776_24710181
ENSMUSG00000020654.16_3	chr12	+	4535	22	FSM	ENSMUSG00000020654.16	ENST00000679454.1	4553	22	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGATGAGACTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4183529	4263518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4183720_4184146_4185001_4223454_4223605_4244316_4244448_4244865_4244978_4245131_4245260_4246763_4246923_4248294_4248470_4249304_4249434_4250901_4251045_4251181_4251344_4253513_4253602_4254721_4254839_4256364_4256625_4256912_4256979_4258579_4258662_4259304_4259464_4260193_4260341_4260771_4260892_4261481_4261606_4262078_4262204_4262604
ENSMUSG00000020656.17_0	chr12	+	1370	12	FSM	ENSMUSG00000020656.17	ENST00000405379.6	1386	12	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAAGGGGCAGGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24631452	24665925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24631718_24634303_24634461_24634832_24634945_24636054_24636150_24652906_24653066_24658027_24658080_24658431_24658572_24659702_24659741_24661821_24661914_24662153_24662240_24664393_24664459_24665816
ENSMUSG00000020657.17_0	chr12	+	4666	7	FSM	ENSMUSG00000020657.17	ENSMUST00000020986.15	4698	7	17	15	17	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATAGCAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	4132599	4160591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4132874_4135953_4136037_4139133_4139204_4146212_4146378_4147223_4147347_4153053_4153215_4156801
ENSMUSG00000020659.17_0	chr12	-	3931	6	FSM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCAAAAAGTTGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	31549554	31534833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589_31544749_31549521
ENSMUSG00000020659.17_1	chr12	-	3939	6	FSM	ENSMUSG00000020659.17	ENSMUST00000185739.8	3945	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCAAAAAGTTGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	31549556	31534833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542176_31544580_31544749_31549521
ENSMUSG00000020659.17_2	chr12	-	3878	5	ISM	ENSMUSG00000020659.17	ENSMUST00000064240.14	3937	6	4822	10	4822	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATAAGCAAAAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	31544732	31534837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544589
ENSMUSG00000020659.17_3	chr12	-	3898	5	ISM	ENSMUSG00000020659.17	ENSMUST00000185739.8	3945	6	4814	6	4812	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGCAAAAAGTTGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	31544742	31534833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542176_31544580
ENSMUSG00000020659.17_4	chr12	-	3887	6	FSM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATACTATTTTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	31549612	31534944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580_31544749_31549521
ENSMUSG00000020659.17_5	chr12	-	3793	5	ISM	ENSMUSG00000020659.17	ENSMUST00000101499.10	3900	6	4866	14	4805	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAATACTATTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31544749	31534948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_31538314_31540466_31540541_31541510_31541595_31542077_31542179_31544580
ENSMUSG00000020661.16_0	chr12	+	6162	23	FSM	ENSMUSG00000020661.16	ENST00000264709.7	6171	23	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCCTGGGGTTAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	3856434	3960843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3856603_3885026_3885261_3899634_3899740_3915984_3916253_3922834_3922879_3923281_3923429_3945542_3945759_3945989_3946149_3946577_3946686_3946885_3947043_3947297_3947448_3947564_3947610_3949192_3949273_3949586_3949700_3949863_3950048_3950276_3950362_3951548_3951695_3952380_3952472_3952665_3952815_3954139_3954226_3955592_3955663_3956764_3956884_3957605
ENSMUSG00000020664.11_0	chr12	-	2530	14	FSM	ENSMUSG00000020664.11	ENSMUST00000110857.5	2544	14	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGTGCTACAATTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	31401443	31381280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31393373_31393443_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020664.11_16	chr12	-	1856	13	FSM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGAGTCAATGACTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31401338	31381780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31394821_31394902_31399595_31399675_31401299
ENSMUSG00000020664.11_18	chr12	-	1809	12	ISM	ENSMUSG00000020664.11	ENST00000440410.5	1866	13	1672	10	1672	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACGAGTCAATGACTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	31399666	31381780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_31382242_31382337_31382428_31383423_31383562_31383865_31384056_31384611_31384783_31385464_31385656_31390278_31390381_31390862_31391007_31391376_31391478_31392742_31392813_31394821_31394902_31399595
ENSMUSG00000020668.11_0	chr12	+	4122	9	FSM	ENSMUSG00000020668.11	ENSMUST00000220210.2	4144	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTTAATTTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	3415145	3454056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3415497_3415771_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUSG00000020668.11_2	chr12	+	6778	8	FSM	ENSMUSG00000020668.11	ENSMUST00000020999.7	6791	8	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGCTTGCCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3415199	3456491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3417532_3437551_3437654_3438134_3438258_3439622_3439742_3440437_3440555_3451682_3451792_3452433_3452607_3452788
ENSMUSG00000020669.16_0	chr12	+	1731	10	FSM	ENSMUSG00000020669.16	ENSMUST00000020997.15	1750	10	13	6	-11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAAGTACTTTGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	30961679	31010155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_30962227_30972233_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992129_30992788_30992868_31008846_31008904_31009802
ENSMUSG00000020669.16_2	chr12	+	1021	8	FSM	ENSMUSG00000020669.16	ENST00000403712.6	1037	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACTGTTTACTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	30972242	31010049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_30972345_30974762_30974877_30976808_30976874_30989572_30989686_30990289_30990419_30991965_30992134_30992788_30992872_31009802
ENSMUSG00000020671.10_0	chr12	-	3494	6	FSM	ENSMUSG00000020671.10	ENSMUST00000021001.10	3513	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCAACTGTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3359958	3297435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_3299871_3302611_3302714_3303268_3303359_3306866_3307006_3314688_3314750_3359291
ENSMUSG00000020673.15_0	chr12	-	1486	8	FSM	ENSMUSG00000020673.15	ENST00000382198.5	1501	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGTAACTCCAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	30169546	30142548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_30142753_30144777_30145016_30148167_30148339_30150317_30150577_30153902_30154110_30155905_30156036_30166811_30166945_30169402
ENSMUSG00000020674.18_0	chr12	+	6371	23	FSM	ENSMUSG00000020674.18	ENSMUST00000220271.2	6377	23	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGTTAAGTGGAGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	29987606	30067644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29987666_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ENSMUSG00000020674.18_3	chr12	+	6603	23	FSM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	4	7	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGAGAATCTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29988038	30067650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29988324_30023991_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ENSMUSG00000020674.18_4	chr12	+	6310	22	ISM	ENSMUSG00000020674.18	ENSMUST00000122328.8	6614	23	35957	15	35943	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCGTTAAGTGGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	30023991	30067642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_30024064_30025489_30025562_30029238_30029311_30032292_30032365_30032696_30032769_30034427_30034598_30034865_30034984_30037062_30037233_30040734_30041008_30043372_30043490_30044422_30044582_30045270_30045384_30046431_30046589_30049163_30049273_30049890_30050049_30051919_30053424_30055714_30055850_30056524_30056734_30061832_30061954_30062214_30062345_30064464_30064579_30065449
ENSMUSG00000020676.3_0	chr11	+	1046	3	FSM	ENSMUSG00000020676.3	ENSMUST00000000342.3	1082	3	27	9	27	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAACATTTTCTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	81948675	81953772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_81948869_81952504_81952617_81953031
ENSMUSG00000020677.8_0	chr11	+	3167	15	FSM	ENSMUSG00000020677.8	ENSMUST00000049257.8	3194	15	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAATAAAAACTAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83832896	83853896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83833091_83834068_83834268_83835361_83835496_83836930_83837117_83839270_83839415_83840408_83840521_83842115_83842189_83842937_83843142_83844052_83844144_83845906_83846030_83846114_83846266_83846797_83846874_83848291_83848364_83850272_83850360_83852575
ENSMUSG00000020679.12_0	chr11	+	2463	9	FSM	ENSMUSG00000020679.12	ENST00000617811.5	2474	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTCCCCCACCCGAAA	NA	NA	NA	NA	NA	NA	NA	NA	83741710	83796382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83742219_83746729_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779877_83780011_83784207_83784403_83787047_83787167_83795736
ENSMUSG00000020679.12_3	chr11	+	1370	6	FSM	ENSMUSG00000020679.12	ENST00000613727.4	1390	6	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCACAGAGTAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	83741755	83780000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83742219_83746729_83746930_83752619_83752807_83754768_83755005_83773478_83773640_83779877
ENSMUSG00000020679.12_6	chr11	+	1649	7	FSM	ENSMUSG00000020679.12	ENST00000614313.4	1665	7	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAGGACACGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83741756	83784399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83742219_83746729_83746930_83752541_83752807_83754768_83755005_83773478_83773640_83779877_83780011_83784207
ENSMUSG00000020680.16_0	chr11	+	1882	18	FSM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	6	1	6	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83364438	83397568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83364526_83371935_83372008_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020680.16_3	chr11	+	1797	17	ISM	ENSMUSG00000020680.16	ENST00000603777.5	1889	18	7501	1	7501	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGAGTGCATTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	83371933	83397568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_83372008_83372759_83372800_83375476_83375529_83375635_83375721_83375802_83375906_83378048_83378240_83379750_83379872_83388087_83388123_83388719_83388753_83389898_83390009_83391940_83392071_83393585_83393679_83395071_83395154_83395253_83395343_83395467_83395558_83395786_83395931_83397243
ENSMUSG00000020682.18_0	chr11	-	2426	8	FSM	ENSMUSG00000020682.18	ENSMUST00000108137.9	2451	8	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAGAGACAGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	83353878	83332707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83333772_83334584_83334753_83335036_83335187_83335646_83335893_83338345_83338571_83342211_83342400_83342485_83342566_83353573
ENSMUSG00000020682.18_1	chr11	-	1512	8	FSM	ENSMUSG00000020682.18	ENSMUST00000119346.2	1517	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACTGTCTAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	83353813	83333886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83334102_83334584_83334753_83335036_83335187_83335646_83335893_83338345_83338571_83342211_83342400_83342485_83342566_83353573
ENSMUSG00000020687.14_0	chr11	-	5469	20	FSM	ENSMUSG00000020687.14	ENST00000066544.8	5492	20	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTATGACAAAAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	104441328	104393365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104394025_104394204_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_23	chr11	-	5407	19	FSM	ENSMUSG00000020687.14	ENSMUST00000093923.9	5425	19	12	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGTTTATAATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	104441297	104393576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411663_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_26	chr11	-	2559	19	FSM	ENSMUSG00000020687.14	ENST00000527547.5	2568	19	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCCCTGTCCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	104441264	104396388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420_104427497_104441188
ENSMUSG00000020687.14_29	chr11	-	2483	18	ISM	ENSMUSG00000020687.14	ENST00000527547.5	2568	19	13771	6	13722	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTCCCTGTCCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	104427496	104396388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_104396507_104397963_104398121_104399172_104399248_104400996_104401126_104403726_104403845_104406197_104406407_104408201_104408355_104411489_104411660_104412206_104412415_104413548_104413649_104416876_104416993_104417688_104417804_104419088_104419301_104419403_104419559_104420166_104420265_104422555_104422682_104425563_104425712_104427420
ENSMUSG00000020689.5_0	chr11	+	5768	15	FSM	ENSMUSG00000020689.5	ENSMUST00000021028.5	5784	15	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAACTGGCCTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	104498834	104561295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104498991_104514236_104514323_104522999_104523196_104524223_104524477_104527877_104528041_104528648_104528811_104531117_104531214_104531826_104531917_104533009_104533145_104534401_104534832_104549548_104549772_104550861_104550963_104553154_104553275_104556291_104556459_104557905
ENSMUSG00000020691.14_0	chr11	+	1853	9	FSM	ENSMUSG00000020691.14	ENSMUST00000021030.8	1867	9	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACAGACAAAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105017256	105031212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105017433_105017601_105017694_105019566_105019902_105021272_105021323_105022398_105022460_105023266_105023407_105026163_105026271_105028544_105028611_105030386
ENSMUSG00000020692.15_0	chr11	-	1776	13	FSM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	82799231	82791594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUSG00000020692.15_1	chr11	-	1710	12	ISM	ENSMUSG00000020692.15	ENSMUST00000103213.10	1783	13	175	1	144	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGCAGCTTCTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	82799062	82791594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_82791877_82792382_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82796332_82796410_82797250_82797331_82798378_82798597_82798917
ENSMUSG00000020692.15_10	chr11	-	1338	11	FSM	ENSMUSG00000020692.15	ENST00000360831.9	1343	11	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTGGGGGTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	82799203	82792384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82797299_82797331_82798378_82798597_82798917_82799062_82799164
ENSMUSG00000020692.15_9	chr11	-	1288	10	ISM	ENSMUSG00000020692.15	ENST00000360831.9	1343	11	156	2	156	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTGGGGGTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	82799050	82792384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_82792454_82792534_82792695_82793820_82794024_82794915_82794963_82795065_82795202_82795617_82795811_82796103_82796202_82797299_82797331_82798378_82798597_82798917
ENSMUSG00000020694.18_0	chr11	+	3691	22	FSM	ENSMUSG00000020694.18	ENSMUST00000106941.9	3699	22	3	5	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCTCCTGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	105072355	105172998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUSG00000020694.18_1	chr11	+	2736	20	FSM	ENSMUSG00000020694.18	ENSMUST00000092537.10	2743	20	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAAAAACATACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	105072625	105167285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105101370_105101467_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662
ENSMUSG00000020694.18_2	chr11	+	3205	21	FSM	ENSMUSG00000020694.18	ENSMUST00000015107.13	3212	21	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTCCTCCTGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	105072745	105172998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105072878_105075037_105075121_105098205_105098278_105099677_105099748_105100619_105100664_105112011_105112180_105131186_105131283_105132394_105132488_105137599_105137711_105138284_105138422_105140310_105140464_105144116_105144184_105145791_105145890_105147695_105147778_105151086_105151179_105157978_105158069_105160451_105160622_105161924_105162064_105166662_105166775_105169943_105170052_105171910
ENSMUSG00000020695.15_0	chr11	+	5777	30	FSM	ENSMUSG00000020695.15	ENSMUST00000100335.10	5795	30	12	6	-10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGAAGTCAGCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	105183483	105241959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105183728_105216327_105216730_105218797_105218972_105219102_105219268_105219488_105219603_105220050_105220195_105222709_105222899_105223061_105223217_105224449_105224558_105226962_105227079_105227450_105227600_105228453_105228672_105229617_105229761_105231043_105231147_105231363_105231503_105231623_105231660_105231919_105232081_105232176_105232245_105233918_105234020_105234281_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238060_105238300_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239604_105240393_105240421_105240524
ENSMUSG00000020695.15_10	chr11	+	2522	10	FSM	ENSMUSG00000020695.15	ENST00000446119.2	2543	10	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAAGATGGTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	105233931	105241640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105234073_105234179_105234425_105237035_105237151_105237255_105237420_105237545_105237655_105238424_105238594_105238685_105238833_105239132_105239253_105239423_105239620_105240524
ENSMUSG00000020696.19_1	chr11	-	3477	7	FSM	ENSMUSG00000020696.19	ENSMUST00000108173.10	3489	7	5	7	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACAGATGCCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	82762031	82694654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82697016_82699338_82699363_82700833_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020696.19_2	chr11	-	1707	5	FSM	ENSMUSG00000020696.19	ENST00000584655.5	1728	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAGAAAAAAATTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	82761991	82696276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82697016_82700833_82701045_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020696.19_3	chr11	-	1764	6	FSM	ENSMUSG00000020696.19	ENST00000394597.7	1783	6	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAGAAAAAAATTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	82736693	82696276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82736577
ENSMUSG00000020696.19_4	chr11	-	1828	6	FSM	ENSMUSG00000020696.19	ENST00000315249.11	1853	6	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATATAGAAAAAAATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	82762015	82696278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82697016_82700818_82701045_82701853_82701938_82703225_82703637_82709241_82709430_82761833
ENSMUSG00000020697.17_0	chr11	+	4542	20	FSM	ENSMUSG00000020697.17	ENSMUST00000092849.12	4560	20	18	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTGTCTGGCTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	82671951	82693688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020697.17_12	chr11	+	1767	7	FSM	ENSMUSG00000020697.17	ENSMUST00000131537.9	1782	7	6	9	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTCATAACTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	82672029	82681122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642
ENSMUSG00000020697.17_14	chr11	+	5766	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	3	28	3	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82672031	82694996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020697.17_21	chr11	+	5697	19	ISM	ENSMUSG00000020697.17	ENSMUST00000173722.8	5797	20	2145	28	2145	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82674173	82694996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020697.17_23	chr11	+	3540	19	ISM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	2158	6	2148	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCTTGTATGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	82674176	82692845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020697.17_5	chr11	+	3052	20	FSM	ENSMUSG00000020697.17	ENSMUST00000080461.12	3056	20	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGTTTGTGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	82672010	82691475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678453_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82691324
ENSMUSG00000020697.17_7	chr11	+	3625	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173347.8	3631	20	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCTTGTATGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	82672018	82692845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672099_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020697.17_8	chr11	+	3623	20	FSM	ENSMUSG00000020697.17	ENSMUST00000173727.8	3636	20	6	7	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTCTTGTATGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	82672024	82692845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82672103_82674171_82674726_82676140_82676285_82678456_82678655_82679589_82679742_82680372_82680540_82680642_82680721_82681298_82681468_82682862_82683019_82684699_82684832_82685329_82685410_82686190_82686279_82686534_82686613_82686853_82686978_82688131_82688275_82688599_82688675_82689081_82689229_82690247_82690447_82691001_82691124_82692106
ENSMUSG00000020698.12_0	chr11	-	1425	13	FSM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGATTTTATACGTG	NA	NA	NA	NA	NA	NA	NA	NA	82654992	82610162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787_82645962_82653013_82653078_82654916
ENSMUSG00000020698.12_1	chr11	-	1449	13	FSM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGATTTTATACGT	NA	NA	NA	NA	NA	NA	NA	NA	82654993	82610163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787_82645962_82651175_82651311_82653013_82653078_82654916
ENSMUSG00000020698.12_2	chr11	-	1372	12	ISM	ENSMUSG00000020698.12	ENST00000421975.7	1457	13	1920	4	1920	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGATTTTATACGTG	NA	NA	NA	NA	NA	NA	NA	NA	82653076	82610162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82644459_82644564_82645787_82645962_82651175_82651311_82653013
ENSMUSG00000020698.12_3	chr11	-	1348	12	ISM	ENSMUSG00000020698.12	ENST00000436961.7	1433	13	1920	4	1920	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGATTTTATACGTG	NA	NA	NA	NA	NA	NA	NA	NA	82653076	82610162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_82610261_82610760_82610834_82613206_82613310_82614639_82614774_82627139_82627288_82627916_82628014_82630448_82630532_82632101_82632262_82632835_82632947_82644459_82644564_82645787_82645962_82653013
ENSMUSG00000020700.12_0	chr11	+	2459	17	FSM	ENSMUSG00000020700.12	ENST00000584573.5	2477	17	13	5	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATAGCTCTGGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	105975433	106045186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105975760_105987816_105987939_105989671_105989774_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020700.12_13	chr11	+	2012	16	FSM	ENSMUSG00000020700.12	ENST00000577395.5	2021	16	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTATGACCAGTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	105975702	106045110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105975760_105987816_105987939_106001569_106001611_106005009_106005110_106008315_106008430_106014611_106014733_106033250_106033385_106036511_106036574_106039390_106039459_106039639_106039733_106040307_106040500_106041095_106041245_106041834_106041967_106042443_106042574_106043042_106043221_106044791
ENSMUSG00000020704.14_0	chr11	-	3753	10	FSM	ENSMUSG00000020704.14	ENST00000225823.7	3761	10	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCCACACCATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	81044473	80771007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80771985_80772438_80772508_80774247_80774328_80777421_80777514_80780558_80780713_80782565_80782627_80784799_80784951_80843305_80843434_80862289_80862441_81042583
ENSMUSG00000020704.14_1	chr11	-	1852	9	FSM	ENSMUSG00000020704.14	ENST00000359872.6	1865	9	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCCACACCATCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80862429	80771007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80771985_80772438_80772508_80774247_80774328_80777421_80777514_80780558_80780713_80782565_80782627_80784799_80784951_80843305_80843434_80862289
ENSMUSG00000020705.7_1	chr11	+	3990	18	FSM	ENSMUSG00000020705.7	ENSMUST00000021046.6	4011	18	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGTTATCTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	106107763	106139956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106107983_106114906_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_18	chr11	+	2676	17	FSM	ENSMUSG00000020705.7	ENST00000359353.9	2694	17	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAGAGGGTATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	106107813	106138984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106107929_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020705.7_8	chr11	+	3781	18	FSM	ENSMUSG00000020705.7	ENST00000583590.5	3798	18	10	7	-5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGACCTGAGGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106107798	106139836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106107935_106114912_106115145_106115609_106115761_106119588_106119651_106121155_106121193_106121957_106122108_106123631_106123737_106125677_106125798_106126432_106126610_106127820_106127950_106129333_106129434_106129961_106130010_106130827_106130926_106132376_106132654_106133700_106133928_106136152_106136264_106137601_106137704_106138317
ENSMUSG00000020706.14_0	chr11	-	3112	21	FSM	ENSMUSG00000020706.14	ENSMUST00000021048.7	3144	21	14	18	14	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGATAAAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	106146891	106139985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106140443_106140529_106140625_106140698_106140883_106140980_106141081_106141173_106141260_106141387_106141663_106141731_106141850_106141979_106142162_106143028_106143165_106143253_106143404_106143491_106143573_106143725_106143827_106143906_106144012_106144114_106144231_106144307_106144503_106144587_106144688_106145432_106145513_106145611_106145659_106146145_106146252_106146410_106146504_106146586
ENSMUSG00000020707.7_0	chr11	+	1965	5	FSM	ENSMUSG00000020707.7	ENSMUST00000017839.3	1984	5	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAACTGTGTTGAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	80074690	80090578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80075082_80080049_80080194_80084711_80084875_80087698_80087774_80089386
ENSMUSG00000020708.13_0	chr11	+	1307	11	FSM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAACACTACAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	106146980	106153938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106147041_106147673_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_18	chr11	+	1053	8	ISM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	4009	7	4009	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGTGAGGCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106151679	106153878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_7	chr11	+	1242	10	ISM	ENSMUSG00000020708.13	ENSMUST00000021049.9	1316	11	699	8	8	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAACACTACAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	106147678	106153938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153135_106153229_106153329_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020708.13_8	chr11	+	1126	9	FSM	ENSMUSG00000020708.13	ENST00000589763.1	1136	9	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGTGAGGCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106147673	106153878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106147746_106151678_106151749_106152010_106152109_106152248_106152537_106152731_106152859_106152943_106153173_106153406_106153518_106153622_106153710_106153834
ENSMUSG00000020709.16_0	chr11	+	1770	11	FSM	ENSMUSG00000020709.16	ENSMUST00000021050.14	1785	11	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAGCAAGCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	80044930	80069769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80045136_80045815_80045947_80047770_80047863_80050988_80051069_80052973_80053087_80056498_80056646_80061503_80061588_80064913_80064977_80066881_80066960_80067871_80068101_80069221
ENSMUSG00000020715.10_0	chr11	-	6933	22	FSM	ENSMUSG00000020715.10	ENSMUST00000001059.9	6946	22	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGAGTTGCCTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	106378612	106285478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106289581_106290597_106290666_106291020_106291145_106294273_106294402_106296547_106296696_106297866_106298067_106298321_106298422_106298885_106299076_106299715_106299807_106300720_106300989_106302448_106302641_106305176_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ENSMUSG00000020715.10_2	chr11	-	1951	11	FSM	ENSMUSG00000020715.10	ENSMUST00000106801.8	1957	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCCAGAGATAGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	106378662	106304597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106305296_106309649_106309816_106310844_106310924_106312531_106312794_106314212_106314315_106317638_106317762_106319839_106319913_106325740_106325814_106327915_106327950_106349733_106349855_106378442
ENSMUSG00000020716.17_0	chr11	+	11890	58	FSM	ENSMUSG00000020716.17	ENSMUST00000071325.9	11917	58	24	3	24	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGAGGAGTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	79230674	79472435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79230886_79275000_79275145_79277480_79277565_79281034_79281226_79286680_79286788_79299239_79299308_79299527_79299604_79300219_79300378_79302321_79302496_79302880_79303004_79303509_79303585_79309377_79309510_79316338_79316474_79319403_79319518_79325670_79325751_79327515_79327640_79329512_79329675_79331673_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79349596_79349733_79354058_79354122_79359542_79359702_79360598_79360697_79362260_79362408_79364154_79364302_79366598_79366710_79426428_79426862_79427618_79427960_79431155_79431359_79436179_79436374_79437097_79437239_79437796_79438077_79438493_79438709_79439299_79439362_79439499_79439615_79440233_79440336_79441819_79441961_79444696_79444824_79446306_79446439_79447524_79447661_79450230_79450389_79455649_79455773_79456246_79456378_79456745_79456847_79459475_79459619_79459949_79459997_79461056_79461274_79469079
ENSMUSG00000020716.17_10	chr11	+	432	4	FSM	ENSMUSG00000020716.17	ENST00000457709.1	446	4	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGGTATATGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79302334	79325743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79302496_79302880_79303004_79303509_79303585_79325670
ENSMUSG00000020716.17_11	chr11	+	2462	16	FSM	ENSMUSG00000020716.17	ENST00000556855.2	2484	16	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATGACCAGGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79331722	79364288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_79331924_79332454_79332529_79332716_79332801_79334594_79335036_79335425_79335566_79335849_79335973_79336541_79336626_79337631_79337749_79338309_79338492_79338950_79339163_79344628_79344791_79344924_79345029_79359542_79359702_79360598_79360697_79362260_79362408_79364154
ENSMUSG00000020717.20_0	chr11	-	3281	15	FSM	ENSMUSG00000020717.20	ENSMUST00000080853.11	3283	15	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATCTGCATTCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106606083	106545043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106545989_106562567_106562625_106570374_106570438_106571857_106571912_106573705_106573780_106574418_106574447_106575053_106575162_106575786_106576075_106579601_106579878_106581761_106582011_106586579_106586856_106587877_106588181_106590417_106590712_106605727_106605755_106605844
ENSMUSG00000020718.13_0	chr11	-	1479	8	FSM	ENSMUSG00000020718.13	ENSMUST00000021060.6	1506	8	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATACAGTTTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	106670321	106659085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668075_106668260_106668388_106669784
ENSMUSG00000020718.13_4	chr11	-	1268	8	FSM	ENSMUSG00000020718.13	ENST00000539111.7	1287	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTCTCTGTTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	106670140	106659113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106659298_106663477_106663579_106664210_106664292_106664420_106664562_106666252_106666427_106667968_106668073_106668260_106668388_106669784
ENSMUSG00000020719.15_1	chr11	-	3547	13	FSM	ENSMUSG00000020719.15	ENSMUST00000021062.12	3559	13	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTTCATTTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	106679347	106671181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106673083_106673294_106673520_106674784_106674845_106674926_106674989_106675239_106675351_106675705_106675879_106675961_106676123_106676220_106676363_106676892_106676959_106677051_106677186_106677273_106677371_106677734_106677901_106679098
ENSMUSG00000020720.14_0	chr11	+	1886	11	FSM	ENSMUSG00000020720.14	ENSMUST00000021063.13	1904	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAAGGATCTTGTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	107370318	107388990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_107370511_107376375_107376436_107376533_107376663_107377239_107377348_107379793_107379899_107382606_107382757_107382842_107382978_107384228_107384342_107385455_107385631_107386513_107386592_107388349
ENSMUSG00000020721.17_0	chr11	+	6211	32	FSM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTGTATTGTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	107438785	107577762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_107438808_107440171_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020721.17_1	chr11	+	13142	33	FSM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTGGAGAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	107438793	107584647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_107438808_107440171_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020721.17_10	chr11	+	6135	30	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	26976	7	26968	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTGTATTGTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	107465761	107577762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020721.17_3	chr11	+	6188	31	ISM	ENSMUSG00000020721.17	ENSMUST00000075012.8	6218	32	1394	0	1386	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTACATATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	107440179	107577769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_107440228_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518175_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020721.17_6	chr11	+	13123	32	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	1383	5	1383	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTTGGAGAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	107440176	107584647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_107440228_107446344_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020721.17_8	chr11	+	13057	31	ISM	ENSMUSG00000020721.17	ENSMUST00000106746.8	13147	33	7565	6	7565	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAATTTGGAGAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107446358	107584646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_107446402_107465763_107465992_107468688_107468726_107483531_107483657_107485964_107486022_107489975_107490028_107491101_107491178_107493135_107493335_107493761_107493870_107494891_107495190_107504676_107504945_107509808_107510143_107510909_107511041_107517360_107517541_107518178_107518281_107522997_107523177_107525805_107525925_107526991_107527138_107528605_107528754_107536875_107537060_107539937_107540167_107546869_107547075_107551920_107551973_107552667_107552859_107554433_107554642_107556824_107556905_107560860_107561498_107561872_107562108_107563354_107563872_107576116_107576370_107577210
ENSMUSG00000020722.6_0	chr11	-	1233	4	FSM	ENSMUSG00000020722.6	ENSMUST00000021065.6	1249	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTCCTTTTTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	107607339	107594050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_107594717_107595130_107595269_107596602_107596678_107606985
ENSMUSG00000020728.18_0	chr11	+	3436	27	FSM	ENSMUSG00000020728.18	ENSMUST00000150863.9	3453	27	11	6	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTATTCTGTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108316028	108751435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_108316178_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ENSMUSG00000020728.18_4	chr11	+	3389	27	FSM	ENSMUSG00000020728.18	ENSMUST00000130515.9	3395	27	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTATTCTGTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108316329	108751435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_108316432_108324951_108325066_108328031_108328223_108331249_108331423_108361117_108361209_108362842_108362921_108377418_108377467_108377738_108377817_108389069_108389157_108393891_108393992_108397364_108397484_108399047_108399192_108409504_108409660_108409955_108410086_108410721_108410815_108414144_108414205_108422211_108422292_108461113_108461250_108481829_108481938_108497038_108497222_108555321_108555553_108643403_108643467_108648495_108648646_108699475_108699566_108746608_108746711_108750168_108750234_108751017
ENSMUSG00000020733.4_0	chr11	+	1918	6	FSM	ENSMUSG00000020733.4	ENSMUST00000021077.4	1925	6	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTCTGTGTCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115054172	115072006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115054778_115067176_115067339_115068049_115068204_115069875_115069917_115070832_115070923_115071140
ENSMUSG00000020736.13_0	chr11	-	838	5	FSM	ENSMUSG00000020736.13	ENSMUST00000021082.7	858	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACGCGAGGCTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	115382678	115381255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115381571_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUSG00000020736.13_1	chr11	-	818	5	FSM	ENSMUSG00000020736.13	ENSMUST00000106530.8	836	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACGCGAGGCTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	115382633	115381255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115381596_115381678_115381794_115381963_115382025_115382096_115382198_115382432
ENSMUSG00000020737.13_0	chr11	-	1364	5	FSM	ENSMUSG00000020737.13	ENSMUST00000021083.7	1375	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACCGTGTTTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	115405204	115388180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115389126_115391491_115391511_115392830_115392929_115393857_115394001_115405045
ENSMUSG00000020737.13_11	chr11	-	760	4	FSM	ENSMUSG00000020737.13	ENST00000356033.8	765	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGATGTCCTTGGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	115405122	115388683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115389126_115392830_115392929_115393857_115394001_115405045
ENSMUSG00000020738.17_0	chr11	-	1035	4	FSM	ENSMUSG00000020738.17	ENSMUST00000153892.2	1051	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAGCTGTTCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115427093	115413934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115414596_115421171_115421244_115425377_115425510_115426923
ENSMUSG00000020739.12_0	chr11	+	2221	19	FSM	ENSMUSG00000020739.12	ENSMUST00000021085.11	2230	19	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1720	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGATGGATGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	115455267	115474810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115455389_115455979_115456074_115457426_115457590_115459188_115459260_115459504_115459549_115460527_115460598_115460824_115460947_115468755_115468891_115468989_115469113_115469314_115469447_115469615_115469723_115471329_115471414_115471555_115471622_115471746_115471899_115472567_115472686_115472764_115472866_115473702_115473855_115474151_115474254_115474546
ENSMUSG00000020740.14_0	chr11	-	3807	17	FSM	ENSMUSG00000020740.14	ENSMUST00000019135.14	3816	17	3	6	3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTTGGCATCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	115494874	115475086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUSG00000020740.14_1	chr11	-	3546	16	FSM	ENSMUSG00000020740.14	ENSMUST00000106508.10	3582	16	30	6	30	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGCTTGGCATCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	115494847	115475086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115476667_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115483257_115483357_115485531_115485608_115485734_115485820_115494653
ENSMUSG00000020740.14_3	chr11	-	2136	15	FSM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGACTTTTATGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	115485813	115475650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115475886_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115485531_115485608_115485734
ENSMUSG00000020740.14_4	chr11	-	2058	14	ISM	ENSMUSG00000020740.14	ENST00000578348.5	2150	15	212	7	212	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGACTTTTATGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	115485608	115475650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_115475886_115476911_115477023_115477141_115477312_115477821_115478028_115478231_115478543_115478761_115478830_115479137_115479372_115479681_115479799_115479880_115479963_115481221_115481360_115481712_115481794_115482088_115482193_115482455_115482580_115485531
ENSMUSG00000020741.18_1	chr11	+	5363	26	FSM	ENSMUSG00000020741.18	ENSMUST00000092915.12	5379	26	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74540348	74561665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554609_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_12	chr11	+	5168	25	FSM	ENSMUSG00000020741.18	ENST00000570628.6	5185	25	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74547268	74561665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_14	chr11	+	5178	25	NNC	ENSMUSG00000020741.18	novel	5185	25	NA	NA	3	-8	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74547262	74561665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554719_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020741.18_5	chr11	+	5259	26	FSM	ENSMUSG00000020741.18	ENST00000435359.5	5268	26	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTGCTGCCCCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	74540449	74561665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74540521_74547248_74547452_74547993_74548166_74550011_74550156_74550308_74550434_74550519_74550675_74550774_74550901_74551177_74551326_74551489_74551583_74552222_74552918_74554205_74554433_74554612_74554715_74554856_74554958_74555599_74555753_74555832_74555896_74556007_74556253_74556518_74556604_74556748_74556903_74556980_74557121_74557767_74557849_74557925_74558052_74558142_74558265_74558492_74558587_74558672_74558808_74558892_74558967_74560240
ENSMUSG00000020743.16_0	chr11	-	1353	6	FSM	ENSMUSG00000020743.16	ENSMUST00000021087.14	1372	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAAACTGCGTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	115503784	115498751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115499440_115499886_115499980_115500105_115500262_115500364_115500475_115502728_115502861_115503610
ENSMUSG00000020743.16_4	chr11	-	708	3	FSM	ENSMUSG00000020743.16	ENST00000580571.5	727	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATGGGCAATTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	115500467	115498927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115499440_115499886_115499980_115500364
ENSMUSG00000020743.16_8	chr11	-	580	4	FSM	ENSMUSG00000020743.16	ENST00000649805.1	596	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGCCCAGGTCTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	115500468	115499216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115499440_115499882_115499980_115500105_115500262_115500364
ENSMUSG00000020744.14_0	chr11	-	2294	7	FSM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	4	9	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAGGAGAAGCTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	115518967	115505012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518890
ENSMUSG00000020744.14_1	chr11	-	2219	6	ISM	ENSMUSG00000020744.14	ENSMUST00000021089.11	2307	7	3775	9	3775	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGAGGAGAAGCTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	115515196	115505012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024
ENSMUSG00000020744.14_3	chr11	-	2570	8	FSM	ENSMUSG00000020744.14	ENSMUST00000178003.8	2614	8	37	7	37	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACCAGAGGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	115519084	115505016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115506418_115507346_115507478_115508343_115508528_115511702_115511874_115514697_115514854_115515024_115515195_115518462_115518626_115518890
ENSMUSG00000020745.16_0	chr11	-	5789	11	FSM	ENSMUSG00000020745.16	ENSMUST00000021091.15	5803	11	5	9	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	74615491	74564783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614824
ENSMUSG00000020745.16_2	chr11	-	5771	11	FSM	ENSMUSG00000020745.16	ENSMUST00000102520.9	5789	11	10	8	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTAGATCTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	74614674	74564783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74581035_74581111_74581351_74581437_74590136_74590347_74614025
ENSMUSG00000020745.16_5	chr11	-	5010	9	FSM	ENSMUSG00000020745.16	ENST00000674717.1	5019	9	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCCTATAAAACTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74614880	74564791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74590136_74590347_74614824
ENSMUSG00000020745.16_6	chr11	-	4948	8	ISM	ENSMUSG00000020745.16	ENST00000674717.1	5019	9	24541	8	24344	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCCTATAAAACTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74590340	74564791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_74568569_74570283_74570441_74573060_74573163_74574284_74574514_74575231_74575335_74576721_74576891_74579802_74580010_74590136
ENSMUSG00000020747.19_0	chr11	+	5310	32	FSM	ENSMUSG00000020747.19	ENSMUST00000093912.11	5329	32	8	11	3	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATATATGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	115656266	115690181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681161_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020747.19_1	chr11	+	5295	32	FSM	ENSMUSG00000020747.19	ENST00000314256.12	5313	32	6	12	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATATATGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	115656269	115690181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115656380_115668073_115668204_115676265_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020747.19_10	chr11	+	4393	31	FSM	ENSMUSG00000020747.19	ENST00000375248.9	4401	31	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGCCTCATGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	115671534	115689264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115671794_115676269_115676386_115676640_115676769_115677001_115677139_115678187_115678391_115679064_115679217_115679488_115679592_115679770_115679858_115680069_115680187_115680444_115680502_115680750_115680856_115680995_115681149_115681792_115682003_115682572_115682889_115683142_115683317_115683686_115683790_115683882_115684101_115684833_115685016_115685091_115685231_115685488_115685605_115685806_115685907_115686142_115686252_115686450_115686641_115686891_115686970_115687215_115687302_115687561_115687644_115687955_115688105_115688192_115688288_115688388_115688483_115688633_115688805_115689100
ENSMUSG00000020752.12_0	chr11	-	3947	19	FSM	ENSMUSG00000020752.12	ENSMUST00000021097.10	3971	19	16	8	16	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACAATCTTTTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	115824287	115783428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115783985_115784085_115784156_115784320_115784546_115784772_115784864_115785032_115785545_115785821_115785957_115786240_115786335_115786593_115786668_115786749_115786809_115786924_115786962_115787601_115787702_115787866_115788086_115807804_115807885_115813991_115814155_115816232_115816345_115818154_115818261_115818793_115819313_115821502_115821625_115823614
ENSMUSG00000020755.10_0	chr11	+	3639	11	FSM	ENSMUSG00000020755.10	ENSMUST00000140991.2	3654	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTTTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115824117	115857546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115824608_115826191_115826302_115828835_115828884_115842792_115842836_115848186_115848276_115851325_115851418_115852181_115852243_115852564_115852617_115853319_115853379_115854768_115854854_115855036
ENSMUSG00000020758.16_0	chr11	+	5772	39	FSM	ENSMUSG00000020758.16	ENSMUST00000106458.2	5779	39	6	1	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTCTGTCCGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	115868617	115899237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115868704_115869901_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115895729_115895925_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ENSMUSG00000020758.16_1	chr11	+	5680	38	ISM	ENSMUSG00000020758.16	ENSMUST00000106458.2	5779	39	1289	8	1289	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTAGCCACTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	115869900	115899230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_115869985_115870186_115870289_115870439_115870645_115871500_115871598_115871766_115871939_115873526_115873791_115874084_115874175_115874468_115874592_115874862_115875028_115875847_115875925_115877442_115877646_115879285_115879390_115879482_115879582_115879715_115879846_115880544_115880668_115880763_115880871_115881500_115881535_115881709_115881902_115882134_115882239_115882483_115882543_115882711_115882736_115883880_115884030_115884102_115884283_115885087_115885237_115888775_115888981_115890623_115890782_115891064_115891246_115891368_115891507_115894167_115894351_115894428_115894561_115895729_115895925_115896356_115896594_115897286_115897437_115897811_115898001_115898084_115898241_115898326_115898492_115898580_115898692_115898786
ENSMUSG00000020766.5_0	chr11	-	1390	8	FSM	ENSMUSG00000020766.5	ENSMUST00000021114.5	1406	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGAGTCAGTGTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	115903535	115899288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115899541_115899628_115899792_115899873_115900025_115900746_115900929_115901066_115901203_115901388_115901509_115901852_115902043_115903339
ENSMUSG00000020770.14_0	chr11	+	3725	16	FSM	ENSMUSG00000020770.14	ENSMUST00000021116.12	3735	16	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCGTGGCTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115921150	115952033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943985_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUSG00000020770.14_1	chr11	+	3687	16	FSM	ENSMUSG00000020770.14	ENSMUST00000106452.2	3696	16	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCCGTGGCTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115921149	115952033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115921318_115938502_115938713_115939810_115939988_115940139_115940271_115940862_115940999_115941512_115941631_115942283_115942369_115943841_115943946_115944315_115944517_115945222_115945289_115945662_115945838_115946806_115946909_115947016_115947206_115949068_115949251_115949814_115950073_115950648
ENSMUSG00000020773.12_0	chr11	-	2177	6	FSM	ENSMUSG00000020773.12	ENSMUST00000106441.8	2192	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGATTCCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116001055	115996584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115997468_115997757_115997830_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUSG00000020773.12_1	chr11	-	2189	6	FSM	ENSMUSG00000020773.12	ENSMUST00000021120.6	2204	6	8	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGATTCCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116001064	115996584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115997468_115997757_115997833_115998249_115998449_115998603_115998835_115999091_115999188_116000359
ENSMUSG00000020774.10_0	chr11	-	1510	6	FSM	ENSMUSG00000020774.10	ENSMUST00000021119.9	1530	6	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCATAAACTCTAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	73215450	73195827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73196460_73199534_73199645_73204335_73204444_73210620_73210715_73212911_73213108_73215080
ENSMUSG00000020775.14_0	chr11	-	1395	9	FSM	ENSMUSG00000020775.14	ENSMUST00000106439.2	1411	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATATGTCTTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	116029683	116022647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116022957_116023245_116023383_116023568_116023728_116025081_116025128_116025258_116025332_116025733_116025943_116026016_116026152_116029267_116029448_116029536
ENSMUSG00000020776.19_0	chr11	-	5238	30	FSM	ENSMUSG00000020776.19	ENSMUST00000103031.8	5252	30	13	1	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116058966	116033111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ENSMUSG00000020776.19_4	chr11	-	4649	29	FSM	ENSMUSG00000020776.19	ENSMUST00000106435.9	4651	29	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116056738	116033111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657
ENSMUSG00000020776.19_5	chr11	-	4569	28	ISM	ENSMUSG00000020776.19	ENSMUST00000106435.9	4651	29	1223	0	1223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116055517	116033111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043774_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488
ENSMUSG00000020776.19_9	chr11	-	5248	30	NNC	ENSMUSG00000020776.19	novel	5252	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTTTTGGATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	116058979	116033111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_116034293_116035258_116035369_116036250_116036369_116036448_116036587_116036660_116036838_116037261_116037448_116037529_116037653_116038533_116038653_116038729_116038870_116038946_116039055_116039638_116039846_116039944_116040046_116040192_116040349_116041614_116041674_116041844_116041940_116042247_116042344_116043302_116043771_116044778_116044879_116045532_116045691_116045816_116045953_116046209_116046327_116046783_116046862_116048514_116048654_116049714_116049766_116050887_116050937_116052250_116052336_116054143_116054186_116055488_116055517_116056657_116056739_116058377
ENSMUSG00000020777.17_0	chr11	-	3720	14	FSM	ENSMUSG00000020777.17	ENSMUST00000072948.11	3743	14	17	6	17	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGATCTTGGCTGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	116089610	116062719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116080240_116080402_116089047_116089208_116089421
ENSMUSG00000020777.17_3	chr11	-	3976	14	FSM	ENSMUSG00000020777.17	ENSMUST00000066587.12	3987	14	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGGATCTTGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	116089869	116062722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116064425_116065118_116065326_116065456_116065601_116065813_116065920_116066030_116066211_116068945_116069137_116069507_116069671_116070433_116070604_116071116_116071233_116071768_116071889_116072738_116072847_116074289_116074451_116089047_116089208_116089421
ENSMUSG00000020778.13_0	chr11	+	882	4	FSM	ENSMUSG00000020778.13	ENSMUST00000021130.7	902	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCGTATAGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116089691	116106135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116089810_116095670_116095806_116096436_116096595_116105664
ENSMUSG00000020780.16_0	chr11	-	2506	16	FSM	ENSMUSG00000020780.16	ENSMUST00000021133.16	2526	16	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGAGACTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116165031	116135999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116159099_116159214_116162738_116162806_116164751
ENSMUSG00000020780.16_1	chr11	-	2305	15	FSM	ENSMUSG00000020780.16	ENSMUST00000106425.4	2330	15	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGGAGACTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	116164944	116135999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116136757_116137045_116137099_116137470_116137547_116138641_116138772_116139556_116139652_116141561_116141719_116143554_116143620_116145127_116145227_116151619_116151761_116152570_116152654_116153685_116153796_116154040_116154124_116156182_116156379_116162738_116162806_116164751
ENSMUSG00000020781.15_0	chr11	+	1973	11	FSM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCAATACTTACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115705555	115713920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_14	chr11	+	1746	10	ISM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	160	4	160	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCCGTGCCAGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115705741	115713606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711951_115712420_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_15	chr11	+	1886	10	ISM	ENSMUSG00000020781.15	ENSMUST00000021134.10	1979	11	188	0	156	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTCAATACTTACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	115705737	115713920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711834_115712481_115712543_115712824_115712942_115713408
ENSMUSG00000020781.15_6	chr11	+	1809	11	FSM	ENSMUSG00000020781.15	ENST00000680999.1	1815	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCCGTGCCAGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115705583	115713606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115705646_115705740_115705906_115706000_115706065_115706152_115706237_115706523_115706623_115707878_115707932_115710950_115711050_115711204_115711951_115712420_115712543_115712824_115712942_115713408
ENSMUSG00000020782.19_0	chr11	+	2843	20	FSM	ENSMUSG00000020782.19	ENST00000577200.5	2863	20	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGCACAACCGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115725630	115745113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115725729_115734142_115734241_115735319_115735402_115735660_115735777_115736199_115736359_115737746_115737910_115737996_115738130_115738414_115738470_115739011_115739167_115740341_115740560_115740636_115740705_115740821_115740976_115741063_115741169_115741452_115741746_115741833_115741985_115742948_115743100_115743856_115743974_115744093_115744261_115744542_115744808_115745018
ENSMUSG00000020783.15_0	chr11	+	12088	13	FSM	ENSMUSG00000020783.15	ENSMUST00000021135.5	12106	13	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGTCATTAAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	72938621	72980138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72938909_72940684_72940751_72944248_72944355_72955813_72955940_72956396_72956526_72957508_72957586_72958528_72958638_72960539_72960640_72961623_72961728_72964051_72964347_72966440_72966596_72968680_72968843_72969766
ENSMUSG00000020785.18_0	chr11	+	3405	16	FSM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTAAAAAAAAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72909872	72932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72909954_72916362_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ENSMUSG00000020785.18_4	chr11	+	3324	15	ISM	ENSMUSG00000020785.18	ENSMUST00000092937.13	3424	16	6494	15	6494	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTAAAAAAAAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72916362	72932884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_72916764_72917410_72917459_72917840_72917895_72918255_72918308_72918517_72918652_72919054_72919092_72919967_72919990_72921628_72921718_72924584_72924785_72927299_72927354_72928020_72928095_72928363_72928452_72928674_72928804_72929237_72929342_72931046
ENSMUSG00000020790.15_1	chr11	+	8025	25	FSM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATACTTACTTGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	72580831	72662967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72580861_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020790.15_17	chr11	+	7989	24	ISM	ENSMUSG00000020790.15	ENSMUST00000155998.2	8030	25	22159	4	22018	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACTTACTTGGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	72602990	72662968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020790.15_3	chr11	+	4607	25	FSM	ENSMUSG00000020790.15	ENST00000570535.5	4627	25	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGGAAAACTGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	72580979	72659347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72581211_72602982_72603176_72605190_72605310_72613453_72613590_72619586_72619711_72621297_72621448_72623073_72623240_72629077_72629283_72630814_72630884_72631227_72631428_72637681_72637780_72640125_72640355_72640905_72641005_72641226_72641381_72642890_72643060_72644425_72644545_72645162_72645320_72646515_72646717_72648118_72648296_72649278_72649427_72650741_72650833_72651065_72651191_72652188_72652336_72655602_72655694_72658338
ENSMUSG00000020792.16_0	chr11	-	3193	18	FSM	ENSMUSG00000020792.16	ENSMUST00000106411.10	3205	18	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTCCTCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	116197548	116178826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUSG00000020792.16_1	chr11	-	3291	19	FSM	ENSMUSG00000020792.16	ENSMUST00000106413.10	3298	19	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGCTTCCTCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	116197553	116178826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUSG00000020792.16_17	chr11	-	2138	19	FSM	ENSMUSG00000020792.16	ENST00000405575.8	2148	19	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTGGTAACTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	116197498	116179951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116180112_116180350_116180485_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213_116197280_116197439
ENSMUSG00000020792.16_18	chr11	-	2077	18	ISM	ENSMUSG00000020792.16	ENST00000405575.8	2148	19	222	9	5	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTGGTAACTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	116197277	116179951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_116180112_116180350_116180485_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213
ENSMUSG00000020792.16_32	chr11	-	1994	18	ISM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	1412	1	1411	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCAGTGTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116195871	116180009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_33	chr11	-	1972	18	FSM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	2	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCAGTGTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116197281	116180009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213
ENSMUSG00000020792.16_34	chr11	-	1902	17	ISM	ENSMUSG00000020792.16	ENST00000411744.6	1975	18	1411	1	1410	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCAGTGTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116195872	116180009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116191091_116191260_116191929_116192153_116195402_116195509_116195689
ENSMUSG00000020792.16_35	chr11	-	2065	19	FSM	ENSMUSG00000020792.16	ENST00000634349.1	2068	19	2	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGCCAGTGTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116197281	116180009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116180112_116180350_116180485_116180775_116180818_116181032_116181097_116181964_116182061_116182279_116182401_116183344_116183411_116184797_116184865_116185232_116185296_116185567_116185667_116185999_116186153_116186369_116186516_116187555_116187625_116188396_116188490_116191091_116191260_116191929_116192153_116195402_116195509_116195689_116195875_116197213
ENSMUSG00000020793.6_0	chr11	+	1914	2	FSM	ENSMUSG00000020793.6	ENSMUST00000055872.3	1940	2	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTTCATACCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	116171782	116174756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116172677_116173736
ENSMUSG00000020794.14_0	chr11	+	3805	6	FSM	ENSMUSG00000020794.14	ENSMUST00000021148.13	3815	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72498117	72577306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72498462_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020794.14_1	chr11	+	3927	7	FSM	ENSMUSG00000020794.14	ENSMUST00000138247.8	3931	7	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGAGCTATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72498111	72577306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72498462_72536362_72536479_72553896_72554000_72563785_72563884_72568530_72568710_72570194_72570319_72574349
ENSMUSG00000020801.9_0	chr11	-	430	2	FSM	ENSMUSG00000020801.9	ENST00000575197.1	443	2	6	7	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCTCCACTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	72105037	72102547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_72102904_72104963
ENSMUSG00000020801.9_1	chr11	-	354	1	ISM	ENSMUSG00000020801.9	ENST00000575197.1	443	2	2142	7	2142	2	mono-exon	FALSE	NA	NA	NA	NA	NA	418	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTGCTCCACTTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	72102901	72102547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_72102500_72102900
ENSMUSG00000020801.9_2	chr11	-	1140	4	FSM	ENSMUSG00000020801.9	ENSMUST00000021157.9	1161	4	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACCAGGATTGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	72106403	72102555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_72102904_72104602_72104700_72104963_72105042_72105786
ENSMUSG00000020802.9_0	chr11	-	5192	18	FSM	ENSMUSG00000020802.9	ENSMUST00000082152.5	5205	18	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCATTTTTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	116472268	116428573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116430538_116430624_116430683_116430757_116430962_116431912_116432050_116432164_116432865_116433616_116433707_116434233_116434363_116434445_116434559_116434691_116434847_116435173_116435647_116435871_116436023_116436150_116436261_116436659_116436804_116437286_116437351_116437696_116437795_116439595_116439707_116439859_116439920_116471837
ENSMUSG00000020803.4_0	chr11	+	962	4	FSM	ENSMUSG00000020803.4	ENSMUST00000021158.4	981	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATATGCTTAACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	72098383	72100833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72098595_72099078_72099161_72099555_72099632_72100240
ENSMUSG00000020806.16_4	chr11	-	2468	17	FSM	ENSMUSG00000020806.16	ENST00000591885.5	2482	17	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAACTGCAGAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	116498196	116489851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116490265_116490886_116491041_116491223_116491325_116491435_116491512_116491720_116491816_116491911_116491976_116492110_116492218_116492419_116492582_116492714_116492790_116493014_116493127_116494478_116494668_116494753_116494877_116495203_116495333_116495786_116495991_116496068_116496265_116496933_116497059_116498053
ENSMUSG00000020807.16_0	chr11	-	4361	19	FSM	ENSMUSG00000020807.16	ENSMUST00000238653.2	4390	19	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGAACATGTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	72098238	72044932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_72046265_72049617_72049843_72050225_72050347_72056342_72056425_72057463_72057650_72059541_72059629_72060606_72060686_72066028_72066119_72066312_72066403_72067486_72067607_72069230_72069398_72071228_72071453_72080373_72080585_72082244_72082461_72085385_72085449_72086608_72086716_72089188_72089790_72093237_72093381_72098021
ENSMUSG00000020808.4_0	chr11	+	1503	6	FSM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	5	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCATGTTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	71933285	71938191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_71933361_71933842_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUSG00000020808.4_11	chr11	+	1417	4	FSM	ENSMUSG00000020808.4	ENST00000572595.6	1433	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAGCTCGCTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	71933877	71938173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_71934260_71935806_71936085_71936504_71936601_71937512
ENSMUSG00000020808.4_5	chr11	+	1428	5	ISM	ENSMUSG00000020808.4	ENSMUST00000021164.4	1513	6	562	5	-25	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTGGCATGTTTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	71933842	71938191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_71934164_71935806_71936085_71936504_71936601_71937165_71937220_71937512
ENSMUSG00000020808.4_8	chr11	+	1315	4	FSM	ENSMUSG00000020808.4	ENST00000250056.12	1337	4	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAGCTCGCTTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	71933883	71938173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_71934164_71935806_71936085_71936504_71936601_71937512
ENSMUSG00000020810.6_1	chr11	-	739	3	FSM	ENSMUSG00000020810.6	ENST00000589342.1	754	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACAAGCCCGTGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	116544775	116537484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116537819_116540609_116540842_116544602
ENSMUSG00000020811.17_0	chr11	+	2394	9	FSM	ENSMUSG00000020811.17	ENST00000539421.1	2415	9	12	9	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAAACACTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	71650573	71680465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_71651093_71657614_71657730_71659454_71659640_71662678_71662801_71674083_71674244_71675094_71675260_71678543_71678745_71679494_71679969_71680012
ENSMUSG00000020812.19_1	chr11	+	1131	5	FSM	ENSMUSG00000020812.19	ENSMUST00000153405.3	1151	5	7	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTATAAAATTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	116562509	116566606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116562583_116562989_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUSG00000020812.19_3	chr11	+	1049	4	ISM	ENSMUSG00000020812.19	ENSMUST00000153405.3	1151	5	490	19	118	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAACTTTATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116562992	116566600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_116563565_116564763_116564898_116565125_116565202_116566333
ENSMUSG00000020814.14_0	chr11	-	2048	4	FSM	ENSMUSG00000020814.14	ENSMUST00000021170.9	2063	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGAAGCCGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	116718863	116693893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116695481_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_3	chr11	-	738	5	FSM	ENSMUSG00000020814.14	ENSMUST00000047715.12	757	5	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCATGTTTGCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	116718825	116698559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116698795_116701613_116701694_116702748_116702843_116707010_116707069_116718554
ENSMUSG00000020814.14_4	chr11	-	346	4	FSM	ENSMUSG00000020814.14	ENST00000589082.1	360	4	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTGTGGTAAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	116707805	116701624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116701694_116702748_116702843_116707010_116707062_116707673
ENSMUSG00000020817.17_0	chr11	+	5393	18	FSM	ENSMUSG00000020817.17	ENSMUST00000076270.13	5408	18	7	8	-7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTATTTGAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	70735610	70833923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70810002_70810108_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705_70830823_70831207
ENSMUSG00000020817.17_5	chr11	+	1250	5	FSM	ENSMUSG00000020817.17	ENSMUST00000179114.8	1264	5	7	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCACTGCCTGGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70735624	70784940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394
ENSMUSG00000020817.17_6	chr11	+	3842	16	FSM	ENSMUSG00000020817.17	ENSMUST00000100928.11	3860	16	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATCTAGTACACATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70735640	70832122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70735835_70765571_70765701_70775590_70775795_70777836_70777998_70784394_70784515_70791297_70791434_70795430_70795610_70799211_70799344_70808140_70808609_70811677_70811795_70813968_70814068_70816597_70816739_70825230_70825421_70825952_70826009_70828349_70828449_70830705
ENSMUSG00000020818.17_0	chr11	+	1737	14	FSM	ENSMUSG00000020818.17	ENST00000621483.4	1754	14	10	7	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	4086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGATGAGAAAACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	116743371	116764765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116743687_116744825_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020818.17_13	chr11	+	3285	13	FSM	ENSMUSG00000020818.17	ENSMUST00000021173.14	3298	13	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116744650	116766453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116745000_116745468_116745525_116749299_116749408_116750124_116750205_116750322_116750420_116751884_116751944_116752348_116752494_116754731_116754773_116756716_116756783_116759359_116759486_116762119_116762295_116764069_116764206_116764606
ENSMUSG00000020821.18_0	chr11	+	6678	23	FSM	ENSMUSG00000020821.18	ENSMUST00000102554.8	6684	23	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTCCTGGATGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70591375	70622786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70591536_70593271_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
ENSMUSG00000020821.18_3	chr11	+	6592	23	FSM	ENSMUSG00000020821.18	ENSMUST00000137119.3	6596	23	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTCCTGGATGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70591475	70622786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70591536_70593257_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
ENSMUSG00000020821.18_5	chr11	+	6533	22	ISM	ENSMUSG00000020821.18	ENSMUST00000137119.3	6596	23	1781	4	1781	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTCCTGGATGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70593256	70622786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70593378_70593597_70593732_70594093_70594171_70594524_70594705_70595283_70595350_70595724_70595904_70595995_70596108_70596506_70596585_70596725_70596792_70596878_70596955_70597506_70597586_70597766_70597913_70599267_70599438_70599604_70599685_70599776_70599853_70608244_70608325_70609824_70609920_70614873_70614958_70615647_70615835_70615929_70616003_70616713_70617329_70619027
ENSMUSG00000020823.17_0	chr11	+	2854	17	FSM	ENSMUSG00000020823.17	ENSMUST00000021177.15	2866	17	10	2	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117006007	117050089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626_117047729_117049579
ENSMUSG00000020823.17_7	chr11	+	4641	16	FSM	ENSMUSG00000020823.17	ENSMUST00000090433.6	4654	16	8	5	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGAGTGTCCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117006071	117050089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117006178_117007985_117008079_117032243_117032394_117032487_117032620_117034112_117034242_117034606_117034842_117035674_117035785_117037933_117038124_117039360_117039450_117039971_117040043_117040984_117041157_117041429_117041565_117043969_117044105_117046045_117046298_117047186_117047366_117047626
ENSMUSG00000020827.19_0	chr11	+	4835	32	FSM	ENSMUSG00000020827.19	ENSMUST00000102559.11	4865	32	28	2	28	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCATTTTGAGATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	70453751	70505302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70453953_70487993_70488060_70489667_70489725_70489805_70489932_70492439_70492551_70492792_70492884_70493508_70493640_70494090_70494146_70494295_70494375_70494593_70494770_70495009_70495080_70495820_70496032_70496873_70496991_70497745_70497971_70498167_70498342_70498582_70498847_70499166_70499253_70499665_70499785_70499991_70500081_70500233_70500258_70500379_70500544_70500903_70501010_70501091_70501230_70501426_70501536_70502135_70502304_70502411_70502556_70503062_70503198_70503306_70503408_70503491_70503642_70503732_70503893_70503980_70504121_70504454
ENSMUSG00000020828.14_0	chr11	+	3638	25	FSM	ENSMUSG00000020828.14	ENSMUST00000018429.12	3659	25	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACGGCCCATGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70431144	70448928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446157_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ENSMUSG00000020828.14_8	chr11	+	3647	25	FSM	ENSMUSG00000020828.14	ENSMUST00000108557.10	3655	25	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACGGCCCATGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70431168	70448928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70431441_70431670_70431781_70431888_70432020_70432122_70432266_70432640_70432747_70432826_70432893_70433409_70433469_70433586_70433680_70433768_70433922_70434953_70435104_70442005_70442090_70442211_70442291_70443279_70443391_70443523_70443695_70444160_70444288_70444869_70444989_70445102_70445217_70445404_70445510_70445687_70445777_70445876_70445991_70446124_70446208_70446421_70446557_70446733_70446888_70447833_70447949_70448164
ENSMUSG00000020829.10_0	chr11	+	1963	5	FSM	ENSMUSG00000020829.10	ENSMUST00000001126.4	1978	5	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTTACTGGGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	78356528	78362762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78356832_78357176_78358030_78359450_78359535_78361520_78361678_78362196
ENSMUSG00000020829.10_1	chr11	+	1244	4	FSM	ENSMUSG00000020829.10	ENST00000618626.1	1254	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAAGCCATGAGGAGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	78356661	78362260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78356832_78357176_78358030_78361520_78361678_78362196
ENSMUSG00000020831.19_10	chr11	-	768	5	FSM	ENSMUSG00000020831.19	ENSMUST00000102569.10	778	5	8	2	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70128732	70126033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70128356_70128452_70128609
ENSMUSG00000020831.19_12	chr11	-	659	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108577.8	659	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70128728	70126033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126291_70126849_70127038_70128356_70128452_70128609
ENSMUSG00000020831.19_2	chr11	-	659	4	FSM	ENSMUSG00000020831.19	ENSMUST00000108579.8	667	4	6	2	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70128724	70126033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126295_70126849_70127038_70128356_70128452_70128609
ENSMUSG00000020831.19_5	chr11	-	763	5	FSM	ENSMUSG00000020831.19	ENSMUST00000021181.13	779	5	14	2	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70128726	70126033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126295_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUSG00000020831.19_9	chr11	-	872	6	FSM	ENSMUSG00000020831.19	ENSMUST00000108578.9	880	6	6	2	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGTGCTGCCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70128734	70126033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126291_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609
ENSMUSG00000020832.15_0	chr11	-	2005	10	FSM	ENSMUSG00000020832.15	ENSMUST00000021183.4	2014	10	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATCTTTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77971201	77964202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77965001_77965105_77965187_77965303_77965454_77966216_77966466_77966547_77966661_77966815_77966878_77967058_77967106_77968642_77968721_77969087_77969216_77970902
ENSMUSG00000020834.18_0	chr11	+	1774	5	FSM	ENSMUSG00000020834.18	ENSMUST00000021187.12	1779	5	4	1	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCTGGCTCCCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	77923109	77928691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77923325_77923410_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUSG00000020834.18_1	chr11	+	1772	4	FSM	ENSMUSG00000020834.18	ENSMUST00000122342.2	1791	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGATGCTCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	77923190	77928684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77923530_77924838_77924963_77925100_77925413_77927687
ENSMUSG00000020836.16_1	chr11	+	2783	11	FSM	ENSMUSG00000020836.16	ENSMUST00000102493.8	2804	11	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCATCTGGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	77353248	77361301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77353581_77354677_77354937_77356491_77356615_77357020_77357151_77357243_77357426_77358575_77358696_77359091_77359197_77359286_77359433_77359735_77359794_77359882_77360114_77360204
ENSMUSG00000020840.11_0	chr11	+	2480	12	FSM	ENSMUSG00000020840.11	ENSMUST00000021197.10	2497	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGAGCAAGCCGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	76836338	76878197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_76836720_76837067_76837266_76840785_76840896_76841869_76842012_76843326_76843416_76845335_76845429_76856640_76856797_76857557_76857717_76857819_76857888_76859428_76859547_76862734_76862805_76877301
ENSMUSG00000020841.6_0	chr11	-	7924	21	FSM	ENSMUSG00000020841.6	ENSMUST00000021201.6	7946	21	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGTCTTTCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76737827	76669254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76673237_76675212_76675313_76675844_76676031_76677096_76677229_76681652_76681718_76681820_76681917_76682689_76682822_76683561_76683698_76686266_76686463_76688406_76688731_76690614_76690785_76692465_76692609_76693057_76693161_76696801_76696912_76699535_76699704_76702520_76702713_76703207_76703558_76704308_76704479_76705596_76705740_76731213_76731462_76737049
ENSMUSG00000020843.16_1	chr11	+	2800	4	FSM	ENSMUSG00000020843.16	ENSMUST00000021203.7	2817	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCTTCAGCTGATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	76297979	76307112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_76298269_76300467_76300665_76301952_76302026_76304871
ENSMUSG00000020844.7_0	chr11	-	2746	8	FSM	ENSMUSG00000020844.7	ENSMUST00000021204.4	2755	8	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGAGTCCTTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	76289958	76148024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76149574_76152367_76152493_76153833_76154014_76163201_76163309_76164796_76164898_76165340_76165475_76169299_76169418_76289526
ENSMUSG00000020846.7_0	chr11	-	3491	3	FSM	ENSMUSG00000020846.7	ENSMUST00000021207.7	3512	3	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAAACATAAAGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	75918600	75910032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75913067_75915773_75915884_75918253
ENSMUSG00000020849.14_0	chr11	+	2080	6	FSM	ENSMUSG00000020849.14	ENSMUST00000067664.10	2100	6	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACACAGGTGTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	75623704	75656661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75623918_75642706_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_5	chr11	+	1789	6	FSM	ENSMUSG00000020849.14	ENST00000571732.5	1808	6	8	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCCAAATATATCAT	NA	NA	NA	NA	NA	NA	NA	NA	75623751	75656392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75623918_75642681_75642907_75646399_75646507_75647642_75647850_75650117_75650255_75655445
ENSMUSG00000020849.14_9	chr11	+	778	2	FSM	ENSMUSG00000020849.14	ENST00000573026.1	799	2	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAACAATCCGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75623793	75656099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75623918_75655445
ENSMUSG00000020850.15_0	chr11	+	7250	43	FSM	ENSMUSG00000020850.15	ENST00000304992.11	7266	43	8	8	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATAGTGCTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75377636	75400263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75377720_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUSG00000020850.15_11	chr11	+	7236	43	FSM	ENSMUSG00000020850.15	ENSMUST00000102510.8	7249	43	3	10	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTGCTTTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75377648	75400265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75377716_75377906_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUSG00000020850.15_8	chr11	+	7387	42	FSM	ENSMUSG00000020850.15	ENSMUST00000018449.11	7442	42	45	10	41	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATAGTGCTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75377686	75400263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75378018_75378450_75378620_75380567_75380733_75380823_75381043_75381154_75381368_75381466_75381593_75381672_75381779_75382268_75382460_75382584_75382705_75382787_75382978_75383088_75383209_75383322_75383458_75383804_75383935_75384176_75384374_75384639_75384847_75384963_75385128_75385253_75385381_75385499_75385693_75386059_75386248_75386407_75386647_75386855_75387003_75387166_75387378_75387788_75387906_75390624_75390873_75390974_75391155_75391337_75391474_75391591_75391762_75391894_75392025_75392143_75392291_75392596_75392758_75393323_75393516_75394096_75394335_75394442_75394572_75395303_75395418_75395493_75395668_75395920_75396115_75397155_75397396_75397489_75397632_75399099_75399241_75399346_75399487_75399592_75399796_75399960
ENSMUSG00000020857.12_0	chr11	-	995	5	FSM	ENSMUSG00000020857.12	ENSMUST00000021217.11	1012	5	10	7	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGTGTGCAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	93847075	93840646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93846651
ENSMUSG00000020857.12_4	chr11	-	721	4	FSM	ENSMUSG00000020857.12	ENSMUST00000072566.5	734	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGTGTGCAGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	93846600	93840646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320
ENSMUSG00000020859.17_0	chr11	+	7323	29	FSM	ENSMUSG00000020859.17	ENSMUST00000041956.14	7340	29	7	10	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAACATGTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93886935	94016901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93887400_93904448_93904570_93927425_93927497_93934397_93934493_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUSG00000020859.17_18	chr11	+	6878	27	FSM	ENSMUSG00000020859.17	ENSMUST00000075695.13	6910	27	27	5	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAACATGTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93935057	94016901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93970024_93970037_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUSG00000020859.17_19	chr11	+	6826	26	FSM	ENSMUSG00000020859.17	ENSMUST00000103168.10	6840	26	4	10	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAACATGTGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93935097	94016901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUSG00000020859.17_27	chr11	+	6725	26	NIC	ENSMUSG00000020859.17	novel	6756	27	NA	NA	7	-9	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTATATGAAACATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93935197	94016897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983637_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004998_94005176_94007555_94007706_94013547
ENSMUSG00000020859.17_3	chr11	+	4651	27	FSM	ENSMUSG00000020859.17	ENST00000510283.5	4667	27	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTATCACGGAGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	93934985	94014575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93935352_93939233_93939385_93958718_93958927_93959761_93959862_93962390_93962513_93972165_93972224_93973585_93973739_93974773_93974826_93977072_93977204_93980424_93980482_93981383_93981558_93982589_93982720_93983163_93983254_93983640_93983809_93984312_93984485_93988043_93988263_93988506_93988703_93989852_93989979_93990932_93991014_93992916_93992985_93997459_93997609_93999280_93999453_94002858_94002973_94004088_94004128_94004998_94005176_94007555_94007706_94013547
ENSMUSG00000020863.16_0	chr11	-	5214	12	FSM	ENSMUSG00000020863.16	ENSMUST00000166312.8	5244	12	19	11	19	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGGAAAAGGACTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	94212765	94178726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94182405_94183752_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020863.16_10	chr11	-	3470	10	FSM	ENSMUSG00000020863.16	ENSMUST00000107820.2	3478	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGATTGTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	94212807	94181965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020863.16_2	chr11	-	2040	11	FSM	ENSMUSG00000020863.16	ENSMUST00000107821.9	2050	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATATGAGGCATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	94212804	94181886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94182405_94183910_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020863.16_8	chr11	-	3363	11	FSM	ENSMUSG00000020863.16	ENSMUST00000021226.14	3373	11	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGATTGTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	94212805	94181965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94183859_94183963_94184105_94186745_94186907_94187709_94187994_94188584_94188747_94190781_94190887_94192330_94192406_94194667_94194813_94197011_94197052_94200450_94200518_94212515
ENSMUSG00000020864.14_0	chr11	+	3466	5	FSM	ENSMUSG00000020864.14	ENSMUST00000107818.9	3487	5	14	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACCCAGCCCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	94218840	94232660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94219214_94224726_94224876_94225253_94225734_94229165_94229348_94230378
ENSMUSG00000020865.17_0	chr11	-	1791	12	FSM	ENSMUSG00000020865.17	ENST00000427699.5	1797	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCGAGAAGGCCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94283746	94255690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366_94266544_94283696
ENSMUSG00000020865.17_2	chr11	-	1732	11	ISM	ENSMUSG00000020865.17	ENST00000427699.5	1797	12	17212	6	17212	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCGAGAAGGCCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94266534	94255690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_94256056_94258415_94258509_94259006_94259169_94259266_94259445_94262444_94262627_94263698_94263831_94264452_94264515_94264734_94264861_94265547_94265686_94265892_94266019_94266366
ENSMUSG00000020868.16_0	chr11	-	3432	11	FSM	ENSMUSG00000020868.16	ENSMUST00000116349.9	3442	11	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCAATGTCCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94568333	94554678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94555736_94557023_94557358_94557924_94558121_94558409_94558673_94558886_94559064_94559150_94559368_94559552_94559634_94560266_94560470_94560732_94560909_94561133_94561627_94568098
ENSMUSG00000020869.9_0	chr11	+	2827	7	FSM	ENSMUSG00000020869.9	ENSMUST00000021239.7	2837	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTTTCTCCTTTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	94520602	94536042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94520936_94522906_94522967_94525370_94525530_94525737_94525843_94529356_94529430_94532045_94532220_94534119
ENSMUSG00000020871.9_0	chr11	-	2254	3	FSM	ENSMUSG00000020871.9	ENSMUST00000021241.8	2282	3	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAAAAAGAATCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95037073	95031284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95032296_95032614_95032806_95036021
ENSMUSG00000020873.16_0	chr11	+	1504	9	FSM	ENSMUSG00000020873.16	ENSMUST00000021243.16	1523	9	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAAGTGCGAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	95275527	95282593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95275940_95276626_95276731_95277311_95277443_95278036_95278068_95278595_95278754_95279905_95280033_95281103_95281211_95281350_95281505_95282313
ENSMUSG00000020876.15_0	chr11	-	2539	9	FSM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGCAGATGCAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96668352	96658387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793_96667888_96668280
ENSMUSG00000020876.15_1	chr11	-	2468	8	ISM	ENSMUSG00000020876.15	ENSMUST00000021246.9	2551	9	469	7	469	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGCAGATGCAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	96667888	96658387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96666199_96666260_96667793
ENSMUSG00000020876.15_2	chr11	-	2182	8	FSM	ENSMUSG00000020876.15	ENSMUST00000107661.10	2197	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATTTAAGACTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	96668378	96658710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96663961_96664049_96665266_96665322_96667793_96667888_96668280
ENSMUSG00000020876.15_4	chr11	-	1362	5	FSM	ENSMUSG00000020876.15	ENST00000452859.6	1382	5	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAATGGCCACGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	96668441	96659357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96660149_96661464_96661678_96661854_96661951_96663607_96663709_96668280
ENSMUSG00000020877.12_0	chr11	+	1518	8	FSM	ENSMUSG00000020877.12	ENSMUST00000021249.11	1530	8	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAACTGGATCTCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	96920771	96924780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96920882_96921241_96921416_96921705_96921888_96922914_96923115_96923580_96923797_96923889_96924056_96924144_96924326_96924491
ENSMUSG00000020878.7_0	chr11	-	1329	8	FSM	ENSMUSG00000020878.7	ENSMUST00000021251.7	1336	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAATGCTTTTCATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	96932226	96925427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96925851_96926284_96926431_96926697_96926768_96926921_96927032_96927295_96927343_96929597_96929707_96931692_96931799_96931908
ENSMUSG00000020882.18_0	chr11	-	3312	13	FSM	ENSMUSG00000020882.18	ENST00000622445.4	3332	13	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACACTTTGTCAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97913376	97892313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97894189_97895954_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_3	chr11	-	1771	12	FSM	ENSMUSG00000020882.18	ENSMUST00000107561.9	1778	12	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTACACACTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97909195	97895576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97909098
ENSMUSG00000020882.18_4	chr11	-	1859	13	FSM	ENSMUSG00000020882.18	ENSMUST00000092736.11	1880	13	14	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCAGCGTCTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97913446	97895757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97902168_97902324_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020882.18_6	chr11	-	1731	13	FSM	ENSMUSG00000020882.18	ENSMUST00000107562.2	1745	13	7	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCAGCGTCTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97913453	97895757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97896141_97896513_97896610_97900106_97900259_97900394_97900505_97900683_97900743_97901121_97901203_97901452_97901473_97902691_97902769_97903010_97903148_97903637_97903761_97907548_97907669_97910505_97910593_97913167
ENSMUSG00000020883.19_1	chr11	-	8594	15	FSM	ENSMUSG00000020883.19	ENSMUST00000103143.10	8601	15	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTTTCATTTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98040431	97973381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUSG00000020883.19_14	chr11	-	1490	15	FSM	ENSMUSG00000020883.19	ENST00000577399.5	1502	15	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGCGGGGTGGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	98041166	97980420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_97992526_97992623_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040941
ENSMUSG00000020883.19_4	chr11	-	2315	14	FSM	ENSMUSG00000020883.19	ENST00000394294.7	2333	14	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTACCATCAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	98040397	97979530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97980525_97981483_97981697_97982970_97983028_97983938_97983984_97985958_97986020_97987754_97987886_97989245_97989321_97990808_97990936_98000319_98000389_98001760_98001856_98004046_98004122_98006218_98006274_98019140_98019203_98040141
ENSMUSG00000020884.16_0	chr11	+	969	8	FSM	ENSMUSG00000020884.16	ENST00000619926.4	988	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCTAATTAGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	69945122	69948455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69945319_69945676_69945793_69947062_69947159_69947239_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020884.16_2	chr11	+	990	9	FSM	ENSMUSG00000020884.16	ENST00000269299.8	1007	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCTAATTAGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	69945218	69948455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69945319_69945676_69945793_69946822_69946940_69947062_69947159_69947239_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020884.16_4	chr11	+	890	8	FSM	ENSMUSG00000020884.16	ENSMUST00000092959.11	1308	8	153	265	153	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGCTAATTAGGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	69945676	69948455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69945793_69946822_69946940_69947062_69947159_69947239_69947312_69947683_69947771_69947857_69948010_69948089_69948197_69948312
ENSMUSG00000020886.18_0	chr11	+	6318	8	FSM	ENSMUSG00000020886.18	ENSMUST00000231221.2	6326	8	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTTGAACCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	69909710	69928120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69909776_69917748_69917815_69921224_69921279_69921429_69921481_69921692_69921818_69921914_69922085_69922180_69922318_69922470
ENSMUSG00000020886.18_1	chr11	+	6255	7	ISM	ENSMUSG00000020886.18	ENSMUST00000231221.2	6326	8	8042	2	-867	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCCTTGAACCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	69917746	69928120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_69917815_69921224_69921279_69921429_69921481_69921692_69921818_69921914_69922085_69922180_69922318_69922470
ENSMUSG00000020888.17_0	chr11	+	2943	15	FSM	ENSMUSG00000020888.17	ENSMUST00000019362.15	2968	15	18	7	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAACTCCCCAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	69891438	69900930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969
ENSMUSG00000020888.17_1	chr11	+	5026	16	FSM	ENSMUSG00000020888.17	ENSMUST00000190940.2	5037	16	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGGGCGCATGTTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	69891446	69903120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69891853_69895630_69895701_69895980_69896127_69896262_69896373_69896487_69896624_69896763_69896855_69896961_69897032_69897116_69897257_69897339_69897417_69898278_69898347_69898640_69898770_69898845_69898978_69899106_69899287_69899602_69899822_69899969_69901604_69901702
ENSMUSG00000020889.12_0	chr11	-	2701	8	FSM	ENSMUSG00000020889.12	ENSMUST00000064941.7	2721	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGAGCTGGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98666147	98658765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98659246_98659874_98660086_98660528_98660715_98661013_98661658_98662025_98662171_98662262_98662352_98662618_98662961_98665543
ENSMUSG00000020891.12_0	chr11	-	3214	14	FSM	ENSMUSG00000020891.12	ENSMUST00000021262.10	3226	14	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAAGTTGCCTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	69088664	69074764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69076096_69076543_69076715_69076796_69076898_69076996_69077119_69077288_69077459_69077574_69077662_69078488_69078693_69078799_69078947_69079434_69079608_69080660_69080765_69082349_69082473_69087850_69087933_69088178_69088402_69088488
ENSMUSG00000020894.17_0	chr11	+	2179	5	FSM	ENSMUSG00000020894.17	ENSMUST00000021273.13	2205	5	18	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACCATATGGTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	68979333	68983202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68979454_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020894.17_2	chr11	+	833	5	FSM	ENSMUSG00000020894.17	ENST00000488857.5	843	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCCACCCCCAGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	68979409	68981527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68979859_68979931_68980053_68980556_68980716_68980801_68980854_68981475
ENSMUSG00000020895.15_0	chr11	+	763	5	FSM	ENSMUSG00000020895.15	ENSMUST00000075980.12	779	5	7	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAAGAGCAAGGCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	68961638	68963847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248_68963346_68963571
ENSMUSG00000020895.15_2	chr11	+	1248	4	FSM	ENSMUSG00000020895.15	ENSMUST00000094081.5	1263	4	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTCAAACGACTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	68961638	68964106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68961860_68962049_68962118_68962199_68962301_68963248
ENSMUSG00000020897.13_0	chr11	+	1821	9	FSM	ENSMUSG00000020897.13	ENSMUST00000108666.8	1831	9	8	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	68936480	68942488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68936637_68936760_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020897.13_4	chr11	+	1937	8	FSM	ENSMUSG00000020897.13	ENSMUST00000021277.6	1950	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTGTGGTGGTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	68936488	68942488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68936835_68938610_68938714_68938797_68938868_68938999_68939192_68939331_68939471_68939556_68939706_68941127_68941303_68941725
ENSMUSG00000020898.19_0	chr11	+	4148	23	FSM	ENSMUSG00000020898.19	ENSMUST00000021278.14	4164	23	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTTCATCTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68906751	68927298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUSG00000020898.19_3	chr11	+	3980	23	FSM	ENSMUSG00000020898.19	ENSMUST00000161455.8	3989	23	3	6	3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGACCTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	68906782	68927290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68906941_68911855_68911942_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922239_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUSG00000020898.19_6	chr11	+	3967	23	FSM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTGACCTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	68906927	68927290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68906992_68911855_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUSG00000020898.19_8	chr11	+	3905	22	ISM	ENSMUSG00000020898.19	ENSMUST00000116359.3	3978	23	4937	0	4937	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTCATCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	68911859	68927296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_68912020_68913202_68913441_68913534_68913747_68914987_68915133_68916899_68917179_68917276_68917406_68918079_68918313_68918429_68918608_68918689_68918891_68920511_68920639_68921309_68921425_68921516_68921833_68921925_68922016_68922236_68922431_68924008_68924098_68924192_68924368_68924784_68924863_68925460_68925606_68925709_68925775_68926330_68926497_68926592_68926720_68926853
ENSMUSG00000020899.17_0	chr11	-	6358	28	FSM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCATAATGTAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	68899286	68876537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521_68894699_68899228
ENSMUSG00000020899.17_1	chr11	-	6295	27	ISM	ENSMUSG00000020899.17	ENSMUST00000021282.12	6373	28	4595	13	4595	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAATGTAAATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	68894691	68876535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_68879100_68879192_68879517_68880796_68880912_68880995_68881088_68881193_68881402_68881498_68881645_68881865_68881986_68882163_68882320_68882510_68882595_68882681_68882863_68883005_68883237_68883480_68883613_68883741_68883865_68884122_68884285_68884391_68884454_68884633_68884791_68885083_68885158_68888489_68888619_68888738_68888871_68890834_68890964_68891070_68891196_68891274_68891416_68891699_68891806_68891932_68892123_68892558_68892665_68893305_68893442_68894521
ENSMUSG00000020900.16_0	chr11	+	7769	41	FSM	ENSMUSG00000020900.16	ENSMUST00000102611.10	7791	41	14	8	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGACTCTGCTTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	68582754	68707450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ENSMUSG00000020900.16_5	chr11	+	7652	43	FSM	ENSMUSG00000020900.16	ENSMUST00000018887.15	7667	43	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAACAAGAATAATCATG	NA	NA	NA	NA	NA	NA	NA	NA	68582942	68707428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68583009_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68636760_68636791_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68666190_68666254_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ENSMUSG00000020900.16_8	chr11	+	7743	41	FSM	ENSMUSG00000020900.16	ENSMUST00000092984.6	7759	41	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCATGGACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	68583152	68707445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68583386_68590035_68590412_68612145_68612303_68625213_68625242_68636142_68636246_68642767_68642861_68650571_68650636_68651478_68651578_68653336_68653481_68653663_68653760_68655061_68655181_68655866_68656020_68659024_68659199_68661709_68661884_68662697_68662813_68673931_68674126_68674208_68674331_68675752_68675823_68676021_68676183_68676443_68676553_68676650_68676783_68678163_68678371_68680930_68681069_68681442_68681567_68682688_68682861_68683881_68684095_68688157_68688303_68689075_68689283_68691640_68691746_68692402_68692556_68692933_68693183_68693665_68693879_68695452_68695666_68697950_68698113_68699618_68699748_68700985_68701075_68702426_68702551_68702622_68702832_68703794_68703904_68705207_68705381_68705752
ENSMUSG00000020901.14_0	chr11	+	2471	18	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	8	5307	8	-118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGAAGAGCAGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	68322974	68386958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_68323089_68364620_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384980_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68386934
ENSMUSG00000020901.14_10	chr11	+	2506	18	ISM	ENSMUSG00000020901.14	ENST00000616147.4	2541	19	11	5307	11	-118	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGAGAAGAGCAGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	68322977	68386958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_68323089_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68381614_68381769_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384980_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68386934
ENSMUSG00000020901.14_2	chr11	+	2456	17	ISM	ENSMUSG00000020901.14	ENST00000611902.4	2503	19	2	5416	2	-227	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATGGGGGCCTGGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68322968	68386849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_68323089_68364620_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384980_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733
ENSMUSG00000020901.14_29	chr11	+	2616	18	FSM	ENSMUSG00000020901.14	ENST00000584803.1	2623	18	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCAGCTAGGTACGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	68364628	68387074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68364737_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68381614_68381769_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384983_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68386934
ENSMUSG00000020901.14_9	chr11	+	2523	19	FSM	ENSMUSG00000020901.14	ENST00000616147.4	2541	19	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGACGCTAGAGAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	68322977	68392258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68323089_68366228_68366330_68367130_68367200_68368269_68368409_68377376_68377447_68381297_68381473_68381614_68381769_68382772_68382857_68383077_68383778_68383901_68384065_68384367_68384494_68384980_68385110_68385287_68385382_68385607_68385685_68386000_68386095_68386173_68386257_68386733_68386847_68386934_68386959_68392241
ENSMUSG00000020902.13_0	chr11	-	5728	7	FSM	ENSMUSG00000020902.13	ENSMUST00000021284.4	5738	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGCCTTTCTTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	68277642	68100189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68277435
ENSMUSG00000020902.13_2	chr11	-	5855	8	FSM	ENSMUSG00000020902.13	ENSMUST00000108674.9	5874	8	19	0	19	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGCCTTTCTTGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	68291630	68100189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68104161_68117361_68117437_68148280_68148335_68151322_68151473_68168248_68168438_68275928_68277011_68291210_68291469_68291554
ENSMUSG00000020903.14_0	chr11	+	4378	8	FSM	ENSMUSG00000020903.14	ENSMUST00000021285.14	4394	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGATACAACTGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	67857027	68097967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67857344_67860597_67860698_67864058_67864154_67875388_67875500_67902140_67902266_67911731_67911825_68000102_68000205_68094531
ENSMUSG00000020903.14_3	chr11	+	1488	3	FSM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAGTAAACAATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	67857305	67865408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67857344_67860597_67860698_67864058
ENSMUSG00000020903.14_5	chr11	+	1434	2	ISM	ENSMUSG00000020903.14	ENSMUST00000108675.2	1497	3	3308	9	3308	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAGTAAACAATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	67860613	67865408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_67860698_67864058
ENSMUSG00000020904.12_0	chr11	-	448	3	ISM	ENSMUSG00000020904.12	ENST00000576499.1	496	4	11393	5	11393	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTCTGCACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	67844985	67840395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_67840523_67844306_67844440_67844797
ENSMUSG00000020904.12_1	chr11	-	491	4	FSM	ENSMUSG00000020904.12	ENST00000576499.1	496	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTCTGCACAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	67856378	67840395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_67840523_67844306_67844440_67844797_67844998_67856347
ENSMUSG00000020905.12_0	chr11	-	4446	15	FSM	ENSMUSG00000020905.12	ENSMUST00000021288.10	4462	15	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATCCTTTCCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67812966	67745351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_67747371_67766088_67766254_67767198_67767358_67770621_67770971_67771090_67771218_67772031_67772110_67774031_67774136_67778575_67778688_67782175_67782312_67783838_67783975_67788046_67788183_67789709_67789803_67795146_67795251_67804579_67804712_67812370
ENSMUSG00000020908.15_0	chr11	+	6029	41	FSM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	0	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66969125	66993110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66969151_66969920_66969976_66970816_66971029_66973107_66973252_66973676_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ENSMUSG00000020908.15_15	chr11	+	6003	40	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	796	2	796	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66969921	66993110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_66969976_66970816_66971029_66973107_66973252_66973676_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ENSMUSG00000020908.15_20	chr11	+	5946	39	ISM	ENSMUSG00000020908.15	ENSMUST00000108689.8	6031	41	1694	2	1694	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66970819	66993110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_66971029_66973107_66973252_66973676_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ENSMUSG00000020908.15_4	chr11	+	5992	40	FSM	ENSMUSG00000020908.15	ENSMUST00000007301.14	5992	40	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTCTTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	66969125	66993117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66969159_66970813_66971029_66973107_66973252_66973676_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ENSMUSG00000020908.15_9	chr11	+	5987	40	FSM	ENSMUSG00000020908.15	ENSMUST00000165221.2	5994	40	0	7	0	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGGTTTGTTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	66969125	66993110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66969151_66970803_66971029_66973107_66973252_66973676_66973834_66974224_66974253_66974575_66974685_66974900_66974994_66975620_66975685_66975768_66975868_66977170_66977275_66977353_66977493_66978070_66978190_66978274_66978425_66979383_66979555_66979643_66979951_66980066_66980138_66981014_66981103_66981185_66981304_66981577_66981702_66981794_66981932_66982708_66982965_66983156_66983400_66983962_66984140_66984266_66984413_66984492_66984584_66985299_66985690_66985780_66985908_66986834_66986954_66987126_66987324_66987700_66987885_66988704_66988871_66989403_66989529_66990003_66990313_66990425_66990630_66990701_66990828_66991623_66991795_66991913_66992019_66992163_66992260_66992353_66992492_66992965
ENSMUSG00000020910.17_0	chr11	-	1226	4	ISM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	805	8	805	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGTATTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	66942591	66928874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506
ENSMUSG00000020910.17_1	chr11	-	1275	5	FSM	ENSMUSG00000020910.17	ENSMUST00000116363.2	1283	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGTATTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	66943396	66928874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_66929272_66931044_66931162_66932306_66932934_66942506_66942605_66943360
ENSMUSG00000020911.15_0	chr11	-	1561	6	FSM	ENSMUSG00000020911.15	ENSMUST00000007317.8	1576	6	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGAAAAAGGATACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100036941	100031645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100031994_100032105_100032232_100032348_100032511_100032877_100033035_100033251_100033335_100036256
ENSMUSG00000020914.18_2	chr11	-	5200	36	FSM	ENSMUSG00000020914.18	ENSMUST00000068031.8	5221	36	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCCATCCATTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	98915002	98883776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886205_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUSG00000020914.18_3	chr11	-	5201	36	NNC	ENSMUSG00000020914.18	novel	5221	36	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATCCATTCCTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98915004	98883774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_98884240_98884589_98884762_98885032_98885233_98886069_98886202_98886506_98886551_98886675_98886800_98887554_98887702_98888654_98888746_98889987_98890174_98891593_98891678_98891799_98891959_98892175_98892268_98893699_98893896_98894332_98894534_98894651_98894787_98894937_98895170_98896828_98896978_98897785_98897908_98898006_98898122_98900055_98900149_98900415_98900526_98900618_98900725_98900853_98900965_98901299_98901426_98901731_98901890_98902846_98902986_98905240_98905379_98905513_98905616_98905711_98905886_98906853_98907067_98907255_98907354_98909621_98909768_98912536_98912601_98913165_98913257_98913665_98913819_98914871
ENSMUSG00000020917.18_0	chr11	-	4407	29	FSM	ENSMUSG00000020917.18	ENSMUST00000107389.8	4426	29	11	8	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATGGCGTGATGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	100418815	100367186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100393985_100394016_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUSG00000020917.18_3	chr11	-	4367	28	FSM	ENSMUSG00000020917.18	ENSMUST00000007131.16	4393	28	14	12	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGTAACAATGGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	100418812	100367193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265_100414448_100418620
ENSMUSG00000020917.18_4	chr11	-	4137	27	FSM	ENSMUSG00000020917.18	ENSMUST00000165111.8	4162	27	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGTAACAATGGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	100414409	100367193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100368165_100368840_100368918_100369153_100369237_100370009_100370124_100372202_100372347_100372522_100372674_100372970_100373126_100374534_100374629_100375425_100375554_100383330_100383442_100384362_100384445_100384709_100384907_100386685_100386791_100389010_100389180_100389446_100389589_100395028_100395120_100395680_100395836_100403701_100403820_100405101_100405164_100405787_100405925_100406727_100406847_100407601_100407733_100409914_100409995_100410440_100410632_100411116_100411180_100412807_100412931_100414265
ENSMUSG00000020918.15_0	chr11	-	3032	18	FSM	ENSMUSG00000020918.15	ENSMUST00000006973.12	3043	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	100603280	100595571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599809_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUSG00000020918.15_1	chr11	-	3025	18	FSM	ENSMUSG00000020918.15	ENSMUST00000103118.4	3046	18	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTGTTTTTTGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	100603270	100595571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100596258_100596401_100596487_100596586_100596651_100596784_100596822_100596908_100597024_100597175_100597320_100597683_100597795_100599034_100599162_100599372_100599582_100599671_100599812_100599901_100600004_100600208_100600316_100601270_100601463_100601547_100601730_100601965_100602056_100602158_100602305_100602638_100602763_100602906
ENSMUSG00000020919.12_0	chr11	-	5193	19	FSM	ENSMUSG00000020919.12	ENSMUST00000107358.9	5213	19	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAATATTGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100713342	100671564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100712877
ENSMUSG00000020919.12_1	chr11	-	5048	19	FSM	ENSMUSG00000020919.12	ENSMUST00000004143.3	5062	19	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAATATTGAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100741544	100671564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100674049_100674497_100674603_100675078_100675131_100678034_100678206_100679194_100679326_100679492_100679588_100681572_100681780_100685369_100685463_100687244_100687368_100687443_100687532_100687889_100688070_100688471_100688628_100689059_100689212_100689416_100689548_100692232_100692408_100693264_100693355_100695695_100695853_100699221_100699360_100741224
ENSMUSG00000020921.7_0	chr11	-	1556	4	FSM	ENSMUSG00000020921.7	ENSMUST00000021296.7	1574	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGACATTGTGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	102047221	102043380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102044421_102045382_102045530_102046549_102046731_102047033
ENSMUSG00000020922.12_0	chr11	-	2237	5	FSM	ENSMUSG00000020922.12	ENSMUST00000021297.6	2256	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCACTGATGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102076111	102053330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102073683_102073818_102075908
ENSMUSG00000020922.12_1	chr11	-	1986	4	FSM	ENSMUSG00000020922.12	ENSMUST00000107156.9	2015	4	21	8	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATCACTGATGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102076034	102053330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102054994_102056185_102056313_102057912_102058023_102075948
ENSMUSG00000020923.18_1	chr11	-	4679	21	FSM	ENSMUSG00000020923.18	ENSMUST00000174302.8	4692	21	4	9	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTGACTTTCGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	102209918	102195394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ENSMUSG00000020923.18_14	chr11	-	3182	19	FSM	ENSMUSG00000020923.18	ENSMUST00000107115.8	3199	19	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102207519	102196755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUSG00000020923.18_15	chr11	-	3275	20	FSM	ENSMUSG00000020923.18	ENSMUST00000079589.11	3286	20	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102207501	102196755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174
ENSMUSG00000020923.18_18	chr11	-	3238	20	FSM	ENSMUSG00000020923.18	ENSMUST00000107117.9	3258	20	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102208683	102196755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102208407
ENSMUSG00000020923.18_2	chr11	-	4560	20	FSM	ENSMUSG00000020923.18	ENSMUST00000178839.8	4580	20	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGACTTTCGTCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	102209908	102195392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197826_102197904_102197977_102198069_102198118_102198774_102198965_102199054_102199144_102199524_102199636_102199719_102199876_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689_102205866_102207174_102207300_102209673
ENSMUSG00000020923.18_31	chr11	-	2146	19	FSM	ENSMUSG00000020923.18	ENST00000428234.1	2163	19	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGGCTCAGCCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	102205856	102197472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102197593_102197681_102197802_102197904_102197977_102198069_102198118_102198774_102198952_102199054_102199144_102199524_102199636_102199719_102199837_102200222_102200379_102200479_102200594_102200693_102200736_102201016_102201159_102201268_102201403_102201751_102201863_102202205_102202327_102202579_102202645_102204723_102204880_102204964_102205049_102205689
ENSMUSG00000020925.17_0	chr11	-	2351	5	FSM	ENSMUSG00000020925.17	ENSMUST00000092569.13	2366	5	8	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGTGTCTTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102588600	102575518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102577323_102579626_102579686_102581026_102581163_102582936_102583025_102588336
ENSMUSG00000020925.17_7	chr11	-	2305	5	FSM	ENSMUSG00000020925.17	ENSMUST00000164506.3	2316	5	6	5	6	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCAGTGTCTTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102588554	102575518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102577323_102579626_102579688_102581028_102581163_102582936_102583025_102588336
ENSMUSG00000020929.15_0	chr11	-	3322	28	FSM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	-3	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	102771796	102729303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435_102768545_102771720
ENSMUSG00000020929.15_2	chr11	-	3247	27	ISM	ENSMUSG00000020929.15	ENSMUST00000021306.14	3324	28	3248	5	-5	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGCCTTGGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	102768545	102729303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_102729723_102729975_102730084_102730245_102730400_102730849_102730945_102731089_102731209_102731995_102732084_102732226_102732354_102732507_102732595_102734175_102734259_102734965_102735068_102736921_102737063_102737410_102737523_102738783_102738978_102740009_102740138_102742582_102742719_102745604_102745696_102746049_102746114_102750827_102750953_102753436_102753604_102755533_102755617_102756395_102756487_102758671_102758708_102759412_102759479_102759920_102759997_102760993_102761073_102761845_102762012_102768435
ENSMUSG00000020930.10_0	chr11	+	1841	5	FSM	ENSMUSG00000020930.10	ENSMUST00000021307.10	1841	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCGCCTCTGCAGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	102772029	102776042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102772142_102773177_102773258_102773370_102773523_102773899_102774033_102774678
ENSMUSG00000020935.9_0	chr11	-	1726	5	FSM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTCCACTGAATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102907984	102884880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891183_102907875
ENSMUSG00000020935.9_1	chr11	-	817	4	ISM	ENSMUSG00000020935.9	ENSMUST00000021313.9	1744	5	16830	790	16830	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGAGTTAGGTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	102891164	102885662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975
ENSMUSG00000020935.9_3	chr11	-	871	5	FSM	ENSMUSG00000020935.9	ENST00000342350.9	875	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCTGAGTTAGGTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	102919016	102885662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102885999_102888178_102888267_102890469_102890674_102890975_102891173_102918970
ENSMUSG00000020936.9_0	chr11	+	4844	12	FSM	ENSMUSG00000020936.9	ENSMUST00000021314.8	4861	12	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGGTCTGCTCTCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	102919181	102959731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102919529_102933993_102934103_102937204_102937350_102943031_102943151_102946023_102946116_102947208_102947326_102948190_102948362_102949030_102949140_102950903_102951075_102954633_102954802_102955555_102955694_102956573
ENSMUSG00000020937.15_0	chr11	-	3000	15	FSM	ENSMUSG00000020937.15	ENSMUST00000103077.2	3023	15	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	102992478	102961146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102961756_102961835_102961986_102962080_102962217_102962466_102962634_102964553_102964671_102965384_102965536_102965682_102965830_102967539_102967693_102968307_102968453_102968586_102968789_102969064_102969294_102970365_102970496_102971012_102971242_102971329_102971492_102992205
ENSMUSG00000020941.8_0	chr11	-	4235	16	FSM	ENSMUSG00000020941.8	ENSMUST00000021324.3	4246	16	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACGATGGGTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	103158295	103110595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103158163
ENSMUSG00000020941.8_3	chr11	-	2977	16	FSM	ENSMUSG00000020941.8	ENST00000617331.3	2996	16	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTAGTCCTGTCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	103153553	103111857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103112016_103112324_103112426_103115071_103115217_103115859_103115967_103116115_103116449_103117812_103117964_103118357_103118522_103121157_103121263_103121857_103121990_103122182_103122313_103128323_103128462_103129757_103130379_103130457_103130669_103131862_103131933_103132940_103133216_103153417
ENSMUSG00000020946.14_0	chr11	-	3243	6	FSM	ENSMUSG00000020946.14	ENSMUST00000021329.14	3266	6	9	14	9	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTTAAAGAAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	103588715	103567688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020946.14_10	chr11	-	1177	3	ISM	ENSMUSG00000020946.14	ENST00000640138.1	1246	4	2601	8	2601	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCATGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103577534	103569314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_103570224_103574617_103574759_103577407
ENSMUSG00000020946.14_4	chr11	-	1428	6	FSM	ENSMUSG00000020946.14	ENST00000576910.7	1440	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCATGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103588532	103569314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103578350_103578454_103580080_103580146_103588455
ENSMUSG00000020946.14_6	chr11	-	1238	4	FSM	ENSMUSG00000020946.14	ENST00000640138.1	1246	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCATGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103580135	103569314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103570224_103574617_103574759_103577407_103577541_103580080
ENSMUSG00000020946.14_7	chr11	-	1301	5	FSM	ENSMUSG00000020946.14	ENST00000638634.1	1315	5	6	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCATGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103588543	103569314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103570224_103577407_103577541_103578350_103578457_103580080_103580146_103588455
ENSMUSG00000020946.14_8	chr11	-	1497	6	FSM	ENSMUSG00000020946.14	ENST00000623037.2	1510	6	5	8	-3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAGCCATGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103588539	103569314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103570224_103574561_103574759_103577407_103577541_103578350_103578460_103580080_103580146_103588455
ENSMUSG00000020948.10_0	chr12	-	6436	5	FSM	ENSMUSG00000020948.10	ENSMUST00000222508.2	6459	5	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAATTTGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	65012296	64985617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_64990388_64996787_64996997_64998149_64998594_65003612_65004512_65012182
ENSMUSG00000020949.10_0	chr12	-	1005	7	FSM	ENSMUSG00000020949.10	ENSMUST00000021332.10	1022	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTATTGTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	65120769	65109202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_65109515_65110451_65110550_65112510_65112579_65113415_65113552_65115775_65115884_65116724_65116827_65120588
ENSMUSG00000020952.11_0	chr12	+	2088	25	FSM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51424363	51496877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51424420_51430887_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_11	chr12	+	1899	24	FSM	ENSMUSG00000020952.11	ENST00000677340.1	1914	24	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTAAAAAGAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	51430888	51496748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472823_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_16	chr12	+	1750	21	FSM	ENSMUSG00000020952.11	ENST00000679165.1	1766	21	3	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTAAAAAGAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	51430887	51496748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51494354_51494424_51496689
ENSMUSG00000020952.11_19	chr12	+	1941	23	FSM	ENSMUSG00000020952.11	ENST00000676812.1	1953	23	4	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51430888	51496877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_21	chr12	+	1881	23	FSM	ENSMUSG00000020952.11	ENST00000678669.1	1893	23	4	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51430888	51496877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51430959_51433832_51433922_51437147_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_61	chr12	+	1362	18	FSM	ENSMUSG00000020952.11	ENST00000676954.1	1380	18	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTAAAAAGAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	51433835	51496748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51469689_51469787_51472820_51472892_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_62	chr12	+	1656	20	FSM	ENSMUSG00000020952.11	ENST00000676674.1	1669	20	5	8	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51433835	51496877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51433922_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_67	chr12	+	1865	22	FSM	ENSMUSG00000020952.11	ENST00000676520.1	1880	22	5	10	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAATAACAGCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	51433835	51496875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51433922_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_68	chr12	+	1332	15	FSM	ENSMUSG00000020952.11	ENST00000553693.6	1352	15	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGTAAAAAGAGCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	51433837	51496748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51496689
ENSMUSG00000020952.11_9	chr12	+	2022	24	ISM	ENSMUSG00000020952.11	ENSMUST00000021335.7	2096	25	6530	12	6	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAGAAATAACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	51430892	51496872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_51430959_51433832_51433922_51436064_51436156_51437088_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020952.11_98	chr12	+	1781	21	ISM	ENSMUSG00000020952.11	ENST00000676520.1	1880	22	3258	8	3258	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAACAGCTTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51437088	51496877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_51437212_51438965_51439054_51440603_51440694_51443462_51443519_51444475_51444562_51446781_51446882_51459286_51459427_51460877_51460969_51461632_51461707_51462297_51462380_51469689_51469787_51472820_51472892_51474647_51474728_51478270_51478334_51480013_51480090_51486065_51486120_51489313_51489367_51491766_51491801_51492453_51492520_51494354_51494424_51496689
ENSMUSG00000020953.18_0	chr12	+	2450	12	FSM	ENSMUSG00000020953.18	ENSMUST00000085412.7	2456	12	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGTGCCTATTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	51640139	51652538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51640189_51640387_51640441_51640520_51640575_51642117_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51651639
ENSMUSG00000020953.18_2	chr12	+	1519	9	FSM	ENSMUSG00000020953.18	ENST00000475087.5	1538	9	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAACAAAAAGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	51642124	51656562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51642275_51643226_51643361_51643797_51643861_51644810_51644856_51644934_51645083_51648596_51648701_51649429_51649657_51649978_51650496_51656431
ENSMUSG00000020954.17_1	chr12	-	3017	18	FSM	ENSMUSG00000020954.17	ENSMUST00000013130.15	3046	18	16	13	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51738654	51656427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51680361_51680503_51689886_51689998_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ENSMUSG00000020954.17_4	chr12	-	2782	16	FSM	ENSMUSG00000020954.17	ENSMUST00000169503.4	2791	16	9	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51738671	51656427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_51657056_51657142_51657230_51666596_51666705_51668562_51668704_51669958_51670127_51673892_51674015_51674295_51674344_51674487_51674664_51676156_51676291_51694776_51694919_51696886_51697014_51699454_51699629_51702184_51702267_51707933_51708008_51708392_51708497_51738204
ENSMUSG00000020955.10_0	chr12	+	998	5	NIC	ENSMUSG00000020955.10	novel	1035	6	NA	NA	13	-12	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGACTTGACCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	51737832	51785703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51785335
ENSMUSG00000020955.10_1	chr12	+	1023	6	FSM	ENSMUSG00000020955.10	ENSMUST00000021338.10	1035	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACCATGTGACGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51737825	51785709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51738098_51763724_51763934_51767418_51767506_51769762_51769832_51777670_51777683_51785335
ENSMUSG00000020956.15_0	chr12	-	995	4	FSM	ENSMUSG00000020956.15	ENSMUST00000085404.10	1012	4	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCCATGTTTTCATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52053267	52035094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_52035639_52046385_52046657_52051661_52051732_52053157
ENSMUSG00000020956.15_5	chr12	-	2545	3	FSM	ENSMUSG00000020956.15	ENSMUST00000021339.8	2564	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATATCAAATACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	52053274	52044298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_52046657_52051661_52051732_52053157
ENSMUSG00000020961.16_0	chr12	-	9862	7	FSM	ENSMUSG00000020961.16	ENSMUST00000052969.15	9896	7	23	11	23	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAGTGACATTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	91753187	91599793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91606580_91608494_91608698_91614005_91615845_91680700_91680899_91707244_91707521_91710379_91710653_91752900
ENSMUSG00000020962.15_0	chr12	-	6052	9	FSM	ENSMUSG00000020962.15	ENSMUST00000021345.14	6064	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTTGTATTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	91556775	91522039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91556308
ENSMUSG00000020962.15_4	chr12	-	2234	9	FSM	ENSMUSG00000020962.15	ENSMUST00000063314.7	2265	9	19	12	19	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATTTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91557242	91525473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91526626_91529682_91529773_91534313_91534635_91534910_91535045_91536536_91536613_91539339_91539408_91542357_91542566_91553473_91553576_91557159
ENSMUSG00000020964.15_0	chr12	-	6283	21	FSM	ENSMUSG00000020964.15	ENSMUST00000021347.12	6300	21	16	1	-12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91815915	91772817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799828_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUSG00000020964.15_5	chr12	-	6103	20	NIC	ENSMUSG00000020964.15	novel	5544	21	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91815903	91772817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91808411_91808629_91809999_91810038_91815732
ENSMUSG00000020964.15_6	chr12	-	6135	21	FSM	ENSMUSG00000020964.15	ENSMUST00000178462.8	6150	21	14	1	14	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTGGGCGTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91815917	91772817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91798540_91798559_91808411_91808629_91809999_91810038_91815732
ENSMUSG00000020964.15_8	chr12	-	5527	21	FSM	ENSMUSG00000020964.15	ENSMUST00000167466.2	5544	21	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATGCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91815889	91773397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91776828_91778650_91778780_91780605_91780779_91781392_91781468_91781747_91781914_91782539_91782689_91782994_91783083_91784055_91784119_91784992_91785071_91786815_91786885_91790307_91790365_91791593_91791749_91792070_91792153_91793278_91793339_91793425_91793480_91797460_91797624_91798342_91798449_91799978_91799997_91808411_91808629_91809999_91810038_91815732
ENSMUSG00000020973.8_0	chr12	-	3371	3	FSM	ENSMUSG00000020973.8	ENSMUST00000021356.6	3390	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAACGTTTGTTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	69245191	69235867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69237169_69239581_69239726_69243265
ENSMUSG00000020974.7_0	chr12	-	1686	19	FSM	ENSMUSG00000020974.7	ENSMUST00000021359.7	1706	19	7	13	7	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCTTAAAATGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69274962	69248559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69248657_69249680_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269172_69269251_69269877_69269954_69273111_69273213_69274870
ENSMUSG00000020974.7_15	chr12	-	1500	17	FSM	ENSMUSG00000020974.7	ENST00000539565.6	1524	17	10	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTAGAAGACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	69274968	69249697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269877_69269954_69273111_69273213_69274870
ENSMUSG00000020974.7_18	chr12	-	1402	16	ISM	ENSMUSG00000020974.7	ENST00000539565.6	1524	17	1764	16	1739	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACAGTAGAAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	69273214	69249699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_69249749_69250864_69251042_69253183_69253293_69254632_69254711_69254794_69254855_69255690_69255746_69256085_69256176_69256595_69256769_69258146_69258220_69258996_69259046_69259760_69259818_69260602_69260687_69262084_69262160_69268750_69268845_69269877_69269954_69273111
ENSMUSG00000020978.11_0	chr12	+	1892	13	FSM	ENSMUSG00000020978.11	ENSMUST00000021362.5	1905	13	13	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGACTTTTTATCCCACG	NA	NA	NA	NA	NA	NA	NA	NA	69343508	69357461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356760_69356814_69356926
ENSMUSG00000020978.11_11	chr12	+	1332	12	FSM	ENSMUSG00000020978.11	ENST00000554589.5	1343	12	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTTACAATAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	69343764	69357210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69354391_69354465_69355731_69355820_69356926
ENSMUSG00000020978.11_14	chr12	+	1267	11	FSM	ENSMUSG00000020978.11	ENST00000557247.1	1281	11	7	7	7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAATAAATGTATTTAACA	NA	NA	NA	NA	NA	NA	NA	NA	69343762	69357216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69343922_69346989_69347070_69349097_69349216_69350307_69350424_69350654_69350737_69351317_69351402_69352401_69352483_69352556_69352616_69353963_69354074_69355731_69355820_69356926
ENSMUSG00000020982.10_1	chr12	-	4716	33	FSM	ENSMUSG00000020982.10	ENSMUST00000021368.10	4732	33	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCGTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69403931	69357303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69358855_69359028_69359109_69359198_69359243_69359339_69359441_69361189_69361223_69363017_69363213_69363516_69363595_69364800_69364955_69367146_69367197_69367300_69367344_69368874_69369125_69371005_69371127_69371206_69371266_69371692_69371751_69374407_69374521_69377861_69377925_69378645_69378750_69384592_69384682_69386492_69386557_69387664_69387851_69388046_69388256_69388346_69388425_69390902_69390966_69391453_69391530_69391682_69391754_69393089_69393164_69395624_69395712_69399080_69399149_69400567_69400717_69401420_69401547_69402803_69402907_69403052_69403122_69403824
ENSMUSG00000020986.14_0	chr12	-	4086	20	FSM	ENSMUSG00000020986.14	ENSMUST00000021375.12	4109	20	14	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCCATCAGTCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	59058789	59005177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058631
ENSMUSG00000020986.14_12	chr12	-	451	2	FSM	ENSMUSG00000020986.14	ENST00000553970.1	463	2	9	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGTAATTAAATACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	59058789	59053778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59054022_59058581
ENSMUSG00000020986.14_5	chr12	-	3732	20	FSM	ENSMUSG00000020986.14	ENST00000307712.11	3743	20	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTTATTTTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	59058782	59005574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59006873_59013765_59013832_59015598_59015755_59018025_59018113_59019666_59019829_59021367_59021446_59025247_59025402_59029353_59029461_59031917_59032008_59032876_59032958_59036135_59036260_59037758_59037875_59038910_59039070_59043921_59044067_59045044_59045125_59048604_59048842_59051275_59051363_59052044_59052103_59053775_59054022_59058581
ENSMUSG00000020988.10_2	chr12	-	641	4	FSM	ENSMUSG00000020988.10	ENST00000555610.1	657	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3029	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTATCTCCATCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	69768961	69753895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69754124_69759376_69759528_69768085_69768238_69768851
ENSMUSG00000020993.10_2	chr12	-	1022	5	FSM	ENSMUSG00000020993.10	ENST00000347691.9	1037	5	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTAGGGGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59108020	59089799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59090463_59091038_59091133_59097053_59097172_59098426_59098495_59107941
ENSMUSG00000020993.10_3	chr12	-	1249	6	FSM	ENSMUSG00000020993.10	ENSMUST00000021380.10	1255	6	5	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTCCATTAATTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	59108242	59089878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59090463_59091038_59091133_59094908_59094993_59097053_59097172_59098426_59098495_59107941
ENSMUSG00000020994.6_0	chr12	+	3469	9	FSM	ENSMUSG00000020994.6	ENSMUST00000021381.6	3485	9	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAATGAACAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	59113676	59120775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115687_59115783_59115901_59115978_59116927_59117084_59117164_59117304_59118211
ENSMUSG00000020994.6_2	chr12	+	647	6	FSM	ENSMUSG00000020994.6	ENST00000553331.5	660	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGAGCAGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	59113695	59117078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59113902_59114564_59114637_59115070_59115140_59115511_59115585_59115901_59115978_59116927
ENSMUSG00000021000.18_1	chr12	+	2769	23	FSM	ENSMUSG00000021000.18	ENSMUST00000176892.8	2784	23	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTTAAAGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59176537	59236950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59176683_59182849_59182982_59184366_59184389_59184483_59184573_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021000.18_11	chr12	+	4425	24	FSM	ENSMUSG00000021000.18	ENSMUST00000176464.8	4434	24	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCCGAAGGCCAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	59178078	59238367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021000.18_17	chr12	+	2626	25	FSM	ENSMUSG00000021000.18	ENSMUST00000176322.8	2649	25	14	9	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAATCTTATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59178266	59236729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59178391_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021000.18_27	chr12	+	2324	21	FSM	ENSMUSG00000021000.18	ENST00000556148.5	2344	21	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAATCTTATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59184497	59236729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59184573_59191484_59191574_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021000.18_4	chr12	+	2848	25	FSM	ENSMUSG00000021000.18	ENSMUST00000069430.15	2869	25	9	12	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGATTTAAAGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59176557	59236950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59176683_59182849_59182982_59184366_59184389_59184483_59184573_59191484_59191557_59193121_59193149_59193632_59193744_59194637_59194710_59196249_59196355_59201141_59201265_59205038_59205154_59206376_59206424_59206961_59207053_59209666_59209806_59215719_59215822_59217043_59217105_59217742_59217779_59219310_59219379_59220891_59220975_59223116_59223246_59226635_59226795_59230972_59231090_59232514_59232574_59235096_59235332_59236421
ENSMUSG00000021003.11_0	chr12	-	3807	17	FSM	ENSMUSG00000021003.11	ENSMUST00000021390.9	3832	17	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAACATACAAATCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	98225706	98168565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98170347_98173652_98173730_98174969_98175134_98179240_98179419_98180591_98180743_98182509_98182597_98188858_98188949_98193426_98193555_98197674_98197800_98200500_98200657_98208900_98209032_98212512_98212552_98218268_98218409_98220423_98220538_98222885_98222950_98223130_98223200_98225393
ENSMUSG00000021007.15_0	chr12	+	2045	12	FSM	ENSMUSG00000021007.15	ENSMUST00000048402.12	2052	12	4	3	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	98594419	98636071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUSG00000021007.15_5	chr12	+	1533	10	FSM	ENSMUSG00000021007.15	ENSMUST00000101144.10	1541	10	5	3	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	98594430	98636071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98594594_98598221_98598297_98600482_98600579_98603824_98603873_98614607_98614742_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUSG00000021007.15_6	chr12	+	1910	11	FSM	ENSMUSG00000021007.15	ENSMUST00000101146.4	1913	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCACATATTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	98594458	98636071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98594594_98598221_98598297_98603824_98603873_98614607_98614742_98624471_98624906_98625808_98625876_98628230_98628347_98629423_98629478_98630486_98630565_98635090_98635149_98635360
ENSMUSG00000021009.16_0	chr12	-	5551	19	FSM	ENSMUSG00000021009.16	ENSMUST00000170188.8	5562	19	0	11	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGGCATGTTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98703664	98643010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98703623
ENSMUSG00000021009.16_1	chr12	-	5512	18	ISM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	812	7	812	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCATGTTCGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	98700092	98643007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732
ENSMUSG00000021009.16_2	chr12	-	5691	19	FSM	ENSMUSG00000021009.16	ENSMUST00000085116.4	5696	19	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCATGTTCGTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	98700904	98643005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98644938_98645534_98645696_98646215_98646451_98646619_98646749_98648777_98649000_98649736_98649875_98654448_98655888_98659130_98659216_98659815_98659877_98665089_98665170_98666217_98666306_98670400_98670490_98671351_98671440_98675063_98675135_98675794_98675863_98677058_98677157_98681282_98681453_98699732_98700094_98700728
ENSMUSG00000021010.10_0	chr12	+	2755	12	FSM	ENSMUSG00000021010.10	ENST00000356141.8	2763	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGAGCGGGCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	53299828	54115849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_53299879_53401127_53401218_53547816_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_2	chr12	+	2702	11	ISM	ENSMUSG00000021010.10	ENST00000356141.8	2763	12	101302	8	101302	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGAGCGGGCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	53401130	54115849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_53401218_53547816_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021010.10_5	chr12	+	2757	10	FSM	ENSMUSG00000021010.10	ENST00000548645.5	2764	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAAGACATGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	53547822	54115997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_53548062_53687236_53687320_53878478_53878569_53993945_53994121_54050235_54050355_54091314_54091509_54095548_54095656_54108765_54108914_54112573_54112699_54114520
ENSMUSG00000021012.17_0	chr12	+	3124	15	FSM	ENSMUSG00000021012.17	ENSMUST00000110104.10	3146	15	10	12	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAAAGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98713232	98754000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_12	chr12	+	3488	17	FSM	ENSMUSG00000021012.17	ENSMUST00000110105.10	3514	17	14	12	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAAAGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98713261	98754000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746540_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_26	chr12	+	2486	17	FSM	ENSMUSG00000021012.17	ENST00000555755.5	2507	17	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGCCAAATTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	98713311	98753063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98740503_98740579_98745366_98745527_98746306_98746525_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_40	chr12	+	1920	13	FSM	ENSMUSG00000021012.17	ENST00000557607.5	1935	13	8	7	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTATTAAAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	98713308	98753074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98713418_98713738_98713782_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751588_98751666_98751893_98752001_98752833
ENSMUSG00000021012.17_7	chr12	+	3035	14	FSM	ENSMUSG00000021012.17	ENSMUST00000057000.17	3046	14	5	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAAAGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	98713246	98754000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98713418_98713738_98713782_98719036_98719152_98722443_98722485_98723267_98723464_98724770_98725201_98725977_98726139_98726568_98726670_98730081_98730238_98749840_98749962_98751174_98751312_98751576_98751666_98751893_98752001_98752833
ENSMUSG00000021013.17_0	chr12	+	2257	14	FSM	ENSMUSG00000021013.17	ENSMUST00000085109.10	2272	14	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGTAAAACACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	98886840	98949484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910174_98912827_98912873_98923539_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685_98942809_98946060_98946145_98948716
ENSMUSG00000021013.17_9	chr12	+	1362	11	FSM	ENSMUSG00000021013.17	ENST00000338104.10	1378	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGGTCAGAGAACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	98886936	98942803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_98887043_98908476_98908598_98909561_98909626_98909720_98909881_98910083_98910244_98923506_98923626_98927660_98927749_98930755_98930867_98940900_98941041_98942235_98942411_98942685
ENSMUSG00000021018.9_0	chr16	+	1078	4	FSM	ENSMUSG00000021018.9	ENST00000430783.5	1094	4	11	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCTCCATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	20536199	20541014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20540659
ENSMUSG00000021018.9_1	chr16	+	936	5	FSM	ENSMUSG00000021018.9	ENSMUST00000021405.8	950	5	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTTCTCCATTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	20536425	20541014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20536745_20537573_20537658_20537740_20537835_20539268_20539353_20540659
ENSMUSG00000021022.10_0	chr12	-	4203	14	FSM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACAGCCCTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55349776	55325781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378_55349581_55349699
ENSMUSG00000021022.10_1	chr12	-	4126	13	ISM	ENSMUSG00000021022.10	ENSMUST00000021410.10	4216	14	203	6	203	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCACAGCCCTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	55349580	55325781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_55328591_55329698_55329759_55331561_55331700_55334705_55334843_55335223_55335300_55335375_55335432_55336444_55336578_55339288_55339360_55340566_55340665_55344562_55344676_55345195_55345301_55345678_55345807_55349378
ENSMUSG00000021023.15_0	chr12	+	3104	7	FSM	ENSMUSG00000021023.15	ENSMUST00000021411.15	3122	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTTTCAGTTTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55349431	55429273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55351670_55353123_55353172_55355521_55355655_55384944_55385053_55423898_55424048_55426066_55426263_55429041
ENSMUSG00000021024.15_0	chr12	+	1029	7	FSM	ENSMUSG00000021024.15	ENSMUST00000021412.9	1042	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGCGGTGCATCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	55445569	55465236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55445777_55454253_55454349_55454786_55454869_55456911_55457068_55458971_55459151_55461188_55461284_55465021
ENSMUSG00000021025.9_0	chr12	-	1563	6	FSM	ENSMUSG00000021025.9	ENSMUST00000021413.9	1578	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACAGCATTGTCCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	55539424	55536201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55536755_55537190_55537452_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021025.9_2	chr12	-	1284	6	FSM	ENSMUSG00000021025.9	ENST00000557140.5	1302	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGTATATTTATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	55539302	55536229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55536755_55537190_55537323_55537555_55537645_55537904_55538116_55538454_55538564_55539084
ENSMUSG00000021027.18_26	chr12	-	6191	40	FSM	ENSMUSG00000021027.18	ENST00000443361.1	6205	40	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTCCCTGCTGACGCA	NA	NA	NA	NA	NA	NA	NA	NA	55867545	55659439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55769558_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55866535_55866655_55867446
ENSMUSG00000021027.18_3	chr12	-	8250	41	FSM	ENSMUSG00000021027.18	ENST00000637992.1	8263	41	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATTTTTTTGGCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55867780	55650530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55651054_55658857_55658889_55659418_55659544_55687368_55687497_55689109_55689269_55705832_55705989_55712337_55712462_55720237_55720310_55723188_55724051_55730691_55730876_55731271_55731407_55736543_55736613_55740139_55740251_55741931_55742041_55744623_55744683_55745546_55745673_55749219_55749349_55754737_55754894_55755778_55755878_55756298_55756493_55759418_55759572_55763746_55763924_55764877_55765095_55766368_55766494_55768190_55769727_55784995_55785158_55786116_55786355_55788218_55788349_55793900_55794050_55804710_55804846_55809324_55809523_55817403_55817644_55822803_55823013_55824076_55824216_55829566_55829683_55832954_55833133_55834207_55834252_55837096_55837155_55841779_55841830_55842450_55842562_55867446
ENSMUSG00000021028.9_0	chr12	-	1490	9	FSM	ENSMUSG00000021028.9	ENSMUST00000021416.9	1512	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTTTCATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56392665	56375095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_56375585_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020_56389141_56392456
ENSMUSG00000021028.9_2	chr12	-	1158	7	FSM	ENSMUSG00000021028.9	ENST00000621657.4	1172	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGACAAAAAATAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	56389134	56375135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_56375547_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021028.9_3	chr12	-	1229	8	FSM	ENSMUSG00000021028.9	ENST00000318473.11	1246	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGACAAAAAATAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	56389131	56375135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_56375582_56377013_56377053_56382582_56382681_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021028.9_4	chr12	-	1133	7	FSM	ENSMUSG00000021028.9	ENST00000359527.11	1151	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGACAAAAAATAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	56389130	56375135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_56375585_56377013_56377053_56384087_56384241_56384548_56384615_56386985_56387083_56387169_56387389_56389020
ENSMUSG00000021033.12_0	chr12	+	1644	9	FSM	ENSMUSG00000021033.12	ENSMUST00000063117.10	1656	9	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGTCATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	87194501	87211495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87194619_87204666_87204719_87205851_87205920_87206413_87206495_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_13	chr12	+	519	6	ISM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	1193	6	1193	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGAAGGGAGTAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87205857	87210626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_87205920_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_14	chr12	+	474	6	ISM	ENSMUSG00000021033.12	ENST00000349555.7	540	7	1193	6	1193	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGAAGGGAGTAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87205857	87210626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_87205920_87206413_87206495_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_6	chr12	+	534	7	FSM	ENSMUSG00000021033.12	ENST00000349555.7	540	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGAAGGGAGTAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87204664	87210626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87204719_87205851_87205920_87206413_87206495_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021033.12_7	chr12	+	579	7	FSM	ENSMUSG00000021033.12	ENST00000556627.5	585	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGGAAGGGAGTAGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87204664	87210626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87204719_87205851_87205920_87206823_87206950_87208248_87208328_87208813_87208867_87209761_87209812_87210477
ENSMUSG00000021036.11_0	chr12	-	6690	12	FSM	ENSMUSG00000021036.11	ENSMUST00000021424.5	6710	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAGACACCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87435118	87351840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87356795_87359471_87359602_87360824_87360961_87382805_87382933_87388310_87388531_87389417_87389524_87393481_87393576_87397034_87397160_87402299_87402449_87403321_87403477_87415704_87415900_87434819
ENSMUSG00000021037.8_0	chr12	+	1361	9	FSM	ENSMUSG00000021037.8	ENSMUST00000021425.8	1377	9	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	2014	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCATGCATTTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	87313481	87320747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87313696_87314928_87315120_87316648_87316732_87317110_87317229_87318112_87318202_87319345_87319475_87319896_87319999_87320220_87320273_87320364
ENSMUSG00000021038.18_0	chr12	-	2514	20	FSM	ENSMUSG00000021038.18	ENSMUST00000072744.15	2524	20	10	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTCCCCATCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	87313020	87285646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312925
ENSMUSG00000021038.18_5	chr12	-	1404	18	FSM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTCACAGCATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	87310765	87286514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87307405_87307509_87310678
ENSMUSG00000021038.18_6	chr12	-	1762	20	FSM	ENSMUSG00000021038.18	ENST00000556412.4	1782	20	13	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTCACAGCATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	87312977	87286514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87305854_87305996_87307405_87307509_87310678_87310772_87312766
ENSMUSG00000021038.18_7	chr12	-	1321	17	ISM	ENSMUSG00000021038.18	ENST00000327028.8	1417	18	3259	7	3259	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGTCACAGCATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	87307512	87286514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_87286611_87288010_87288116_87288710_87288801_87289259_87289347_87291228_87291319_87291613_87291656_87292902_87293038_87293592_87293669_87296161_87296236_87297250_87297279_87298489_87298593_87299408_87299443_87299939_87300033_87301003_87301061_87303258_87303324_87304188_87304228_87307405
ENSMUSG00000021039.10_13	chr12	-	2184	13	ISM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	3522	10	3522	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	87515522	87496689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379
ENSMUSG00000021039.10_14	chr12	-	2222	14	FSM	ENSMUSG00000021039.10	ENSMUST00000021428.9	2232	14	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCAATTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	87519044	87496689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87497487_87497575_87497740_87499351_87499470_87500627_87500725_87502359_87502502_87503621_87503739_87505662_87505729_87506190_87506261_87507176_87507282_87508434_87508542_87508631_87508728_87511319_87511482_87515379_87515534_87519017
ENSMUSG00000021040.16_0	chr12	+	2680	4	FSM	ENSMUSG00000021040.16	ENSMUST00000161023.8	2701	4	10	11	-6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCATACAAATGAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	87490675	87498965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87490797_87494333_87494393_87496062_87496171_87496573
ENSMUSG00000021044.16_0	chr12	+	2151	11	FSM	ENSMUSG00000021044.16	ENSMUST00000101165.9	2158	11	0	7	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGGACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88327323	88428482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_88327366_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_2	chr12	+	2238	11	FSM	ENSMUSG00000021044.16	ENSMUST00000222695.2	2253	11	8	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGCAGGGACTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	88327425	88428483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_88327554_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_4	chr12	+	2189	11	FSM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGGACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88327662	88428482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_88327743_88335104_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_5	chr12	+	2098	10	ISM	ENSMUSG00000021044.16	ENSMUST00000166940.3	2199	11	7457	6	9	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGGACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	88335115	88428482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_88335251_88338464_88338549_88368742_88368947_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506_88423705_88425779_88425974_88427784
ENSMUSG00000021044.16_6	chr12	+	994	7	FSM	ENSMUSG00000021044.16	ENST00000341211.5	1012	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGTAGGTAACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88335117	88423698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_88335251_88338464_88338549_88397790_88397950_88407852_88408012_88413410_88413528_88422248_88422399_88423506
ENSMUSG00000021048.8_0	chr12	+	3229	28	FSM	ENSMUSG00000021048.8	ENSMUST00000021443.7	3241	28	11	1	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	76302082	76366576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76302319_76317191_76317277_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021048.8_14	chr12	+	3031	27	FSM	ENSMUSG00000021048.8	ENSMUST00000220046.2	3040	27	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTGGTGTTGAAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	76302195	76366576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76302319_76326177_76326238_76326930_76326985_76327153_76327291_76327402_76327504_76329661_76329799_76330705_76330818_76335654_76335783_76336204_76336303_76336458_76336633_76337754_76337892_76340164_76340212_76340913_76341022_76341128_76341204_76344255_76344359_76347161_76347239_76348031_76348173_76349732_76349802_76350407_76350520_76350615_76350756_76353995_76354038_76357682_76357784_76358579_76358758_76361174_76361283_76361722_76361876_76364380_76364475_76366354
ENSMUSG00000021051.11_0	chr12	-	4789	14	FSM	ENSMUSG00000021051.11	ENSMUST00000021447.9	4810	14	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTGGATGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75642955	75497656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_75500588_75506461_75506564_75509075_75509204_75511647_75511768_75513401_75513453_75513565_75513620_75515285_75515395_75516315_75516376_75516505_75516637_75531905_75531999_75540187_75540290_75562375_75562573_75639942_75640107_75642408
ENSMUSG00000021054.7_0	chr12	-	3310	3	FSM	ENSMUSG00000021054.7	ENSMUST00000021450.6	3323	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTGTTCACATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75782490	75761022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_75763439_75769425_75769516_75781686
ENSMUSG00000021057.16_0	chr12	+	6677	2	FSM	ENSMUSG00000021057.16	ENSMUST00000154078.3	6685	2	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTAACTGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	76371665	76380918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76371764_76374339
ENSMUSG00000021062.16_0	chr12	-	3131	7	FSM	ENSMUSG00000021062.16	ENSMUST00000021459.14	3158	7	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATAGGTGTGTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76869308	76844741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76847176_76847339_76847406_76848665_76848756_76849841_76849920_76850341_76850403_76851216_76851278_76868967
ENSMUSG00000021065.17_1	chr12	+	3476	11	FSM	ENSMUSG00000021065.17	ENST00000673929.1	3496	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAACTAGTGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	77285584	77523069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUSG00000021065.17_18	chr12	+	3340	12	FSM	ENSMUSG00000021065.17	ENSMUST00000062804.8	3358	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGAGCAGGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77285847	77523103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_77286028_77324134_77324230_77370618_77370712_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510833_77510985_77521772
ENSMUSG00000021065.17_9	chr12	+	2763	11	FSM	ENSMUSG00000021065.17	ENST00000674118.1	2782	11	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAATAAAATAAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	77285812	77522631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_77286028_77324134_77324230_77378669_77379104_77411742_77411859_77411970_77412134_77440496_77440612_77459485_77459724_77495246_77495494_77496873_77497051_77510880_77510985_77521772
ENSMUSG00000021066.10_0	chr12	+	5144	15	FSM	ENSMUSG00000021066.10	ENSMUST00000021466.10	5150	15	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATATTTTTATTATACA	NA	NA	NA	NA	NA	NA	NA	NA	69939883	70013190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69940119_69954578_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006247_70007321_70007337_70010001
ENSMUSG00000021066.10_9	chr12	+	2473	13	FSM	ENSMUSG00000021066.10	ENST00000358385.12	2492	13	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAACCAAATGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	69954619	70010794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69954767_69972715_69972964_69978311_69978447_69978990_69979096_69981643_69981695_69983848_69983906_69992986_69993080_69994220_69994360_70000213_70000342_70001229_70001287_70002089_70002162_70005814_70006263_70010001
ENSMUSG00000021068.18_0	chr12	-	9667	29	FSM	ENSMUSG00000021068.18	ENSMUST00000085314.11	9675	29	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCCTCTGGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70149627	70058215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70061731_70064346_70064461_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424
ENSMUSG00000021068.18_1	chr12	-	9893	30	FSM	ENSMUSG00000021068.18	ENSMUST00000222237.2	9919	30	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATGCCTCTGGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70160472	70058215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70061731_70064346_70064461_70067607_70067806_70072180_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70160247
ENSMUSG00000021068.18_14	chr12	-	6332	30	FSM	ENSMUSG00000021068.18	ENST00000382041.7	6346	30	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGCCTCTGTCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	70158734	70064348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70088905_70091027_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424_70149629_70158209_70158257_70158627
ENSMUSG00000021068.18_5	chr12	-	4051	27	FSM	ENSMUSG00000021068.18	ENST00000382043.8	4069	27	11	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCCTCTGTCACTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70149619	70064345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70064461_70067607_70067806_70072153_70072256_70073527_70073678_70074785_70074966_70076759_70076907_70077656_70077771_70078430_70078554_70081930_70082045_70085312_70085526_70087360_70087431_70087528_70087655_70091920_70092412_70093926_70094049_70095797_70095937_70097438_70097529_70097913_70098025_70101161_70101337_70101604_70101746_70102080_70102218_70102645_70102814_70103425_70103573_70107924_70108116_70109462_70109503_70124885_70125056_70137309_70137392_70149424
ENSMUSG00000021069.18_1	chr12	-	2798	20	FSM	ENSMUSG00000021069.18	ENSMUST00000071250.13	2825	20	19	8	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATAGCCTGCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	70274438	70237592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70269598_70269701_70274114
ENSMUSG00000021069.18_2	chr12	-	2610	19	NIC	ENSMUSG00000021069.18	novel	2825	20	NA	NA	7	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCCAGTTGTCAATCAA	NA	NA	NA	NA	NA	NA	NA	NA	70274366	70237606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_-_70237931_70240512_70240580_70241006_70241142_70242277_70242486_70243744_70243887_70243991_70244051_70244171_70244320_70244433_70244536_70245203_70245319_70246415_70246580_70246905_70247053_70248042_70248136_70248618_70248763_70253135_70253219_70254444_70254557_70257800_70257933_70263336_70263441_70266362_70266442_70274114
ENSMUSG00000021071.18_0	chr12	-	4338	13	FSM	ENSMUSG00000021071.18	ENST00000684578.1	4359	13	14	7	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGAGGAAAAAAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70394050	70291320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70293226_70295038_70295202_70297730_70298035_70298793_70298818_70299216_70299259_70301811_70302001_70314835_70314975_70319083_70319242_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021071.18_5	chr12	-	2620	12	FSM	ENSMUSG00000021071.18	ENST00000338969.9	2638	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGCTTGTGGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	70394251	70295040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70295202_70297730_70298035_70298793_70298818_70299216_70299259_70301811_70302001_70314835_70314975_70319083_70319230_70327329_70327484_70328606_70328718_70337044_70337168_70339039_70339136_70393120
ENSMUSG00000021072.13_0	chr12	+	2781	8	FSM	ENSMUSG00000021072.13	ENSMUST00000021471.13	2795	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAAGGTGTTGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	70499876	70514808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70500095_70502785_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511241_70512751
ENSMUSG00000021072.13_6	chr12	+	585	7	FSM	ENSMUSG00000021072.13	ENST00000438427.1	606	7	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAGCAAGCAAAGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	70502797	70512850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70502902_70503354_70503401_70505552_70505682_70507118_70507165_70507252_70507355_70511173_70511233_70512751
ENSMUSG00000021076.7_0	chr12	+	3996	13	FSM	ENSMUSG00000021076.7	ENSMUST00000021479.6	4022	13	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAACGAAATCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	70984643	71011479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70984806_70987571_70987645_70989032_70989116_70990182_70990292_70994225_70994334_70996477_70996546_70999723_70999804_71001392_71001429_71003046_71003127_71003373_71003448_71004805_71004888_71006614_71006817_71008640
ENSMUSG00000021079.17_10	chr12	-	389	4	FSM	ENSMUSG00000021079.17	ENST00000556367.6	400	4	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACCAGAGAAAAACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71170184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_71170374_71172235_71172332_71173106_71173172_71178774
ENSMUSG00000021079.17_4	chr12	-	571	3	ISM	ENSMUSG00000021079.17	ENST00000556007.6	629	4	5649	12	5649	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAAAAGTAAATAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	71173164	71169974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_71170392_71172235_71172332_71173106
ENSMUSG00000021079.17_6	chr12	-	617	4	FSM	ENSMUSG00000021079.17	ENST00000556007.6	629	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAAAAGTAAATAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	71178813	71169974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_71170392_71172235_71172332_71173106_71173172_71178774
ENSMUSG00000021079.17_9	chr12	-	341	3	ISM	ENSMUSG00000021079.17	ENST00000556367.6	400	4	5649	13	5649	12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCACCAGAGAAAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	71173164	71170186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_71170374_71172235_71172332_71173106
ENSMUSG00000021090.17_0	chr12	+	4285	30	FSM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTACAAAGAGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	72496101	72557253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72496175_72496421_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550300_72553059_72553201_72557109
ENSMUSG00000021090.17_20	chr12	+	4210	29	ISM	ENSMUSG00000021090.17	ENST00000445360.5	4297	30	328	6	328	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTACAAAGAGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	72496423	72557253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_72496641_72497450_72497592_72497998_72498063_72498736_72498808_72500818_72501002_72502756_72502913_72506606_72506789_72507564_72507697_72510098_72510276_72510606_72510725_72513631_72513765_72515942_72516066_72516984_72517101_72520570_72520784_72522816_72522937_72523976_72524169_72525429_72525556_72528201_72528337_72529667_72529846_72532944_72533166_72533768_72533892_72542338_72542470_72543822_72543932_72544560_72544701_72546352_72546490_72547499_72547718_72550230_72550300_72553059_72553201_72557109
ENSMUSG00000021091.9_0	chr12	+	2051	5	FSM	ENSMUSG00000021091.9	ENSMUST00000021506.6	2064	5	0	13	0	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATAACTGCATTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	104372987	104380575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_104373055_104374912_104375567_104377385_104377660_104378592_104378744_104379670
ENSMUSG00000021091.9_1	chr12	+	1969	4	ISM	ENSMUSG00000021091.9	ENSMUST00000021506.6	2064	5	1946	7	1946	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCATTGAATGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	104374933	104380581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_104375567_104377385_104377660_104378592_104378744_104379670
ENSMUSG00000021094.11_0	chr12	-	1364	7	FSM	ENSMUSG00000021094.11	ENSMUST00000021512.11	1385	7	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACATATTTAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	72711672	72697136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_72697392_72699008_72699225_72699874_72699998_72703073_72703314_72704101_72704209_72706117_72706271_72711402
ENSMUSG00000021096.12_0	chr12	+	7643	6	FSM	ENSMUSG00000021096.12	ENSMUST00000021514.10	7668	6	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCATCATGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	72808002	72846586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72808406_72830456_72831311_72833445_72833564_72837406_72837516_72839551_72839610_72840485
ENSMUSG00000021097.16_0	chr12	-	11856	13	FSM	ENSMUSG00000021097.16	ENSMUST00000109936.3	11866	13	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCACCTCTTTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	104831330	104729380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_104738223_104740031_104740103_104740747_104740809_104743203_104743401_104746980_104748661_104750165_104750249_104751651_104751846_104756240_104756432_104758097_104758191_104763300_104763385_104766735_104766832_104770867_104770930_104831128
ENSMUSG00000021102.5_0	chr12	+	2909	2	FSM	ENSMUSG00000021102.5	ENSMUST00000021522.5	2925	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAAGCCACACCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	104998958	105009159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_104999242_105006533
ENSMUSG00000021103.13_0	chr12	+	3673	7	FSM	ENSMUSG00000021103.13	ENSMUST00000187549.7	3688	7	7	8	7	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTACAGATGCTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	73170497	73280314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73277442
ENSMUSG00000021103.13_1	chr12	+	2497	8	FSM	ENSMUSG00000021103.13	ENSMUST00000021523.7	2505	8	8	0	8	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGACTTAGAAATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73170498	73320762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73170701_73214773_73214927_73217367_73217442_73225978_73226083_73228557_73228699_73234913_73235040_73265794_73265917_73319187
ENSMUSG00000021109.14_0	chr12	+	4379	15	FSM	ENSMUSG00000021109.14	ENSMUST00000110461.8	4385	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATATGCATATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73948148	73994298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73948273_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988503_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021109.14_2	chr12	+	1749	6	FSM	ENSMUSG00000021109.14	ENSMUST00000110464.8	1759	6	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTACTCTACTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	73954677	73979840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047
ENSMUSG00000021109.14_3	chr12	+	4704	15	FSM	ENSMUSG00000021109.14	ENSMUST00000021530.8	4724	15	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTATATGCATATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73954691	73994298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73955099_73973330_73973522_73974759_73974906_73974987_73975073_73977430_73977544_73979047_73979251_73982963_73983071_73984426_73984575_73986302_73986524_73987121_73987406_73988461_73988627_73988734_73989160_73990852_73990962_73991684_73991812_73992325
ENSMUSG00000021111.16_0	chr12	+	4368	22	FSM	ENSMUSG00000021111.16	ENSMUST00000109901.9	4380	22	11	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGTAAGTAGTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105750963	105805065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968_105801044_105803023
ENSMUSG00000021111.16_10	chr12	+	2424	21	FSM	ENSMUSG00000021111.16	ENSMUST00000168186.8	2436	21	12	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAGTTAAAGTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	105750974	105801152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782_105775922_105777295_105777369_105778532_105778654_105779456_105779542_105784614_105784669_105785038_105785159_105786599_105786710_105789814_105789937_105793202_105793346_105794539_105794641_105795315_105795537_105799358_105799422_105800968
ENSMUSG00000021111.16_21	chr12	+	1016	9	FSM	ENSMUSG00000021111.16	ENSMUST00000166735.8	1033	9	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTGAAGTTTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105751022	105775958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105751174_105765909_105766084_105766942_105767010_105771185_105771268_105772745_105772856_105773423_105773478_105774813_105774926_105775601_105775692_105775782
ENSMUSG00000021112.10_0	chr12	+	5446	15	FSM	ENSMUSG00000021112.10	ENSMUST00000082024.7	5470	15	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTAAATGTGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78795779	78887478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78795881_78841018_78841108_78843639_78844165_78856525_78856735_78864014_78864093_78864398_78864546_78865977_78866140_78867581_78867660_78871462_78871647_78872630_78872703_78873034_78873107_78876426_78876595_78877626_78877830_78879138_78879250_78884231
ENSMUSG00000021113.6_0	chr12	+	6252	10	FSM	ENSMUSG00000021113.6	ENSMUST00000021532.6	6275	10	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTAAAATTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74011312	74035730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_74011521_74014681_74014842_74015012_74015154_74016300_74016406_74016954_74017114_74018658_74018728_74019310_74019374_74021784_74021936_74029251_74029354_74030636
ENSMUSG00000021114.10_0	chr12	-	3650	9	FSM	ENSMUSG00000021114.10	ENSMUST00000021536.9	3667	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGGACACCCCACATT	NA	NA	NA	NA	NA	NA	NA	NA	78908403	78887506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78895169_78895274_78896513_78896559_78897245_78897314_78899038_78899119_78904000_78904119_78908192
ENSMUSG00000021114.10_4	chr12	-	1012	5	FSM	ENSMUSG00000021114.10	ENST00000555474.5	1029	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAAACATGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	78908323	78889767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_78890385_78891999_78892079_78894540_78894608_78904000_78904119_78908192
ENSMUSG00000021115.16_37	chr12	+	1087	10	FSM	ENSMUSG00000021115.16	ENST00000557352.2	1096	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTGAAGACAAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	105976566	106029039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105976618_106002798_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888
ENSMUSG00000021115.16_48	chr12	+	1410	12	FSM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	0	11	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGAATCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	105976566	106041475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105976618_106002798_106002964_106017146_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_7	chr12	+	1457	12	FSM	ENSMUSG00000021115.16	ENST00000681195.1	1475	12	7	11	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGAATCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	105976522	106041475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105976618_106002798_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036786_106036875_106041265
ENSMUSG00000021115.16_78	chr12	+	1425	12	FSM	ENSMUSG00000021115.16	ENST00000679918.1	1450	12	12	13	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTCTGAATCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	106002808	106041473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106037828_106037901_106041265
ENSMUSG00000021115.16_89	chr12	+	1028	9	ISM	ENSMUSG00000021115.16	ENST00000680007.1	1369	12	11	12365	8	-9	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGTGAAGACAAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	106002806	106029039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888
ENSMUSG00000021115.16_90	chr12	+	1351	11	ISM	ENSMUSG00000021115.16	ENST00000679727.1	1421	12	26240	11	8	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGAATCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	106002806	106041475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022066_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021115.16_91	chr12	+	1357	11	FSM	ENSMUSG00000021115.16	ENST00000680849.1	1377	11	9	11	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTGAATCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	106002806	106041475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_106002964_106017146_106017264_106018018_106018107_106022060_106022170_106022279_106022373_106024101_106024235_106024834_106024956_106025876_106025936_106028888_106029068_106036783_106036875_106041265
ENSMUSG00000021116.11_0	chr12	+	3394	8	FSM	ENSMUSG00000021116.11	ENSMUST00000071230.8	3405	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTTAAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	78908603	78933784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78908955_78913299_78913542_78921337_78921418_78923865_78924018_78926724_78926832_78927905_78928004_78930031_78930176_78931564
ENSMUSG00000021118.8_0	chr12	-	1503	8	ISM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	6749	2	6749	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78946989	78935466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828
ENSMUSG00000021118.8_1	chr12	-	1574	9	FSM	ENSMUSG00000021118.8	ENSMUST00000021544.8	1583	9	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTATGGTTCTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	78953731	78935466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_78936082_78936685_78936765_78938902_78938987_78940850_78940953_78941161_78941350_78941646_78941739_78942905_78943088_78946828_78946994_78953664
ENSMUSG00000021120.12_0	chr12	-	2317	4	FSM	ENSMUSG00000021120.12	ENSMUST00000072154.9	2339	4	13	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCAAAGTATGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	79136412	79127446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_79129271_79130389_79130474_79132420_79132631_79136213
ENSMUSG00000021123.13_0	chr12	+	1668	7	FSM	ENSMUSG00000021123.13	ENSMUST00000021548.12	1678	7	8	2	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTGGTGTCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	79255695	79269437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_79255883_79257614_79257734_79258161_79258318_79259426_79259532_79260317_79260528_79265449_79265640_79268736
ENSMUSG00000021124.14_0	chr12	-	1477	6	FSM	ENSMUSG00000021124.14	ENSMUST00000055262.13	1490	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTCTTCATTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	79219433	79202795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_79203346_79204621_79204684_79207182_79207357_79211721_79211914_79213124_79213184_79218993
ENSMUSG00000021127.8_0	chr12	-	2975	2	FSM	ENSMUSG00000021127.8	ENSMUST00000021552.3	2990	2	9	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATGATTTGTCTATAG	NA	NA	NA	NA	NA	NA	NA	NA	80159778	80154533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80157323_80159592
ENSMUSG00000021127.8_1	chr12	-	1925	3	FSM	ENSMUSG00000021127.8	ENSMUST00000165114.2	1934	3	0	9	0	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGCTAAAAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	80159772	80155480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80156206_80156302_80157323_80159592
ENSMUSG00000021131.15_0	chr12	-	1280	4	FSM	ENSMUSG00000021131.15	ENSMUST00000021559.14	1293	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTGGTTTTCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80691106	80680799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80681302_80684263_80684385_80687730_80687819_80690537
ENSMUSG00000021133.10_0	chr12	+	2125	7	FSM	ENSMUSG00000021133.10	ENSMUST00000220238.2	2127	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCACTGGCTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	80837285	80924647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80837590_80874799_80875018_80897987_80898051_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ENSMUSG00000021133.10_1	chr12	+	4956	6	FSM	ENSMUSG00000021133.10	ENSMUST00000068519.7	4977	6	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGATGTGAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	80837345	80927601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80837590_80874799_80875018_80915200_80915399_80916848_80916985_80920922_80921351_80923869
ENSMUSG00000021134.18_0	chr12	+	1595	8	FSM	ENSMUSG00000021134.18	ENST00000394366.6	1613	8	9	9	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAGACATTAAAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	80992272	80997215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021134.18_29	chr12	+	1332	8	FSM	ENSMUSG00000021134.18	ENST00000553635.5	1340	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCTGTAGATAGACATT	NA	NA	NA	NA	NA	NA	NA	NA	80992387	80997206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992443_80993349_80993495_80994093_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021134.18_4	chr12	+	1546	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110356.3	1568	8	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTATAAAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	80992367	80997264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992573_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUSG00000021134.18_5	chr12	+	1508	8	FSM	ENSMUSG00000021134.18	ENSMUST00000094693.11	1527	8	9	10	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAACTGCTTTTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	80992286	80997271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUSG00000021134.18_6	chr12	+	1476	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110351.8	1498	8	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTATAAAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	80992314	80997264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992447_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996490
ENSMUSG00000021134.18_7	chr12	+	1469	8	FSM	ENSMUSG00000021134.18	ENSMUST00000110352.10	1491	8	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATTATAAAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	80992314	80997264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80992443_80993349_80993495_80994084_80994156_80994269_80994369_80994569_80994640_80995868_80995943_80996267_80996379_80996493
ENSMUSG00000021136.14_0	chr12	+	3479	13	FSM	ENSMUSG00000021136.14	ENSMUST00000110347.9	3496	13	16	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGCCTCTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81073597	81233187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_81073933_81151380_81151547_81152672_81152786_81182549_81182650_81184738_81184787_81197392_81197483_81199446_81199528_81214280_81214474_81215002_81215086_81216959_81217066_81226252_81226498_81230761_81230816_81231322
ENSMUSG00000021139.18_0	chr12	-	1023	6	FSM	ENSMUSG00000021139.18	ENSMUST00000164386.8	1043	6	14	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGATATGGAAATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	81579665	81405639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021139.18_1	chr12	-	2270	6	FSM	ENSMUSG00000021139.18	ENSMUST00000166664.2	2284	6	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAAATCCATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	81579655	81517389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000021140.10_1	chr12	+	8290	36	FSM	ENSMUSG00000021140.10	ENSMUST00000221721.2	8318	36	21	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTTCAAACAGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	81906817	82043881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975018_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ENSMUSG00000021140.10_12	chr12	+	6920	34	FSM	ENSMUSG00000021140.10	ENST00000439984.7	6934	34	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCATCCCCAAATAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	81907089	82043098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81993704_81993796_81995131_81995190_81996889_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ENSMUSG00000021140.10_4	chr12	+	12120	36	FSM	ENSMUSG00000021140.10	ENSMUST00000021567.6	12139	36	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTTTTTTTTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	81906822	82047698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_81907299_81941756_81941966_81953222_81953329_81959438_81959485_81960159_81960250_81964438_81966155_81975015_81975149_81980304_81980490_81993704_81993796_81995131_81995190_81996874_81997093_81999561_81999716_82003004_82003038_82005456_82005629_82006767_82006879_82009411_82009504_82010811_82010922_82011199_82011306_82013829_82013923_82018019_82018171_82019987_82020130_82021163_82021342_82022017_82022127_82022570_82022701_82025842_82025902_82027582_82027799_82028665_82028920_82030241_82030473_82033432_82033534_82034666_82034818_82037323_82037555_82038547_82038823_82039800_82040007_82041661_82042105_82042494_82042636_82042795
ENSMUSG00000021143.11_0	chr12	+	5469	24	FSM	ENSMUSG00000021143.11	ENSMUST00000084891.5	5480	24	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGGGGCCATGCGG	NA	NA	NA	NA	NA	NA	NA	NA	112978138	113038021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112978303_113007845_113007934_113009097_113009188_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUSG00000021143.11_9	chr12	+	3077	23	FSM	ENSMUSG00000021143.11	ENSMUST00000220541.2	3101	23	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAGCAGATCTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	112978172	113035753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112978303_113007845_113007934_113010648_113010775_113013426_113013590_113014136_113014211_113014500_113014582_113015850_113015911_113020429_113020588_113023342_113023434_113023702_113023781_113024248_113024392_113024692_113024826_113025259_113025365_113025468_113025576_113026066_113026222_113026951_113027063_113027449_113027559_113031696_113031740_113032599_113032643_113032901_113033044_113033676_113033904_113034287_113034402_113035157
ENSMUSG00000021144.15_0	chr12	+	2860	21	FSM	ENSMUSG00000021144.15	ENST00000331320.12	2886	21	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGGAAAACCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	113061845	113100808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_6	chr12	+	2765	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109727.9	2789	20	16	8	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCCACCAAGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113061913	113100817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113083830_113083882_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021144.15_8	chr12	+	2759	20	FSM	ENSMUSG00000021144.15	ENSMUST00000109726.8	2775	20	5	11	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACCCCACCAAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	113061902	113100815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113062066_113075765_113075834_113080607_113080702_113084446_113084574_113084642_113084707_113086736_113086855_113090394_113090498_113091234_113091335_113091651_113091841_113093739_113093815_113094153_113094213_113094504_113094621_113094935_113095088_113095192_113095383_113095507_113095598_113096804_113096958_113097160_113097197_113099416_113099449_113099900_113100053_113100137
ENSMUSG00000021147.18_0	chr13	-	3756	5	FSM	ENSMUSG00000021147.18	ENSMUST00000176922.8	3780	5	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCTCCTCATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	8921043	8900523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_8903771_8904035_8904132_8906867_8906965_8911123_8911302_8920905
ENSMUSG00000021149.9_0	chr13	-	8770	17	FSM	ENSMUSG00000021149.9	ENSMUST00000222098.2	8783	17	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGCTGTTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	9046110	9016370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9023311_9024199_9024344_9024980_9025047_9027271_9027470_9028563_9028665_9029464_9029517_9029937_9030016_9035244_9035356_9035673_9035764_9037284_9037351_9037791_9037984_9039088_9039182_9040733_9040835_9041750_9041888_9041967_9042072_9042680_9042852_9045984
ENSMUSG00000021156.18_0	chr13	-	4089	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110636.9	4117	15	14	14	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	9815336	9734882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815090
ENSMUSG00000021156.18_1	chr13	-	3741	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110637.8	3770	14	18	11	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	9814441	9734882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUSG00000021156.18_13	chr13	-	3486	13	FSM	ENSMUSG00000021156.18	ENST00000602682.6	3491	13	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTTTAGGACTCATTAA	NA	NA	NA	NA	NA	NA	NA	NA	9814471	9735074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUSG00000021156.18_15	chr13	-	3794	15	FSM	ENSMUSG00000021156.18	ENSMUST00000110634.8	3824	15	7	23	7	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	9814985	9735153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814763
ENSMUSG00000021156.18_18	chr13	-	1836	15	FSM	ENSMUSG00000021156.18	ENST00000397962.8	1845	15	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGAGCCTGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	9815213	9736906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9815196
ENSMUSG00000021156.18_2	chr13	-	3969	14	FSM	ENSMUSG00000021156.18	ENSMUST00000110638.8	4003	14	23	11	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCAACAACTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	9814501	9734882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740313_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9770808_9770969_9785367_9785503_9814381
ENSMUSG00000021156.18_3	chr13	-	3942	15	FSM	ENSMUSG00000021156.18	ENST00000381604.9	3958	15	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAACCCAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	9814484	9734886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367_9785503_9814381
ENSMUSG00000021156.18_5	chr13	-	1812	14	ISM	ENSMUSG00000021156.18	ENST00000397962.8	1845	15	29718	9	-14531	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATGAGCCTGCCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	9785495	9736906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_9737021_9739098_9739285_9739487_9739761_9740481_9740551_9740938_9741147_9743465_9743585_9744304_9744383_9745164_9745221_9745774_9745863_9747679_9747773_9748663_9748742_9760181_9760344_9770808_9770969_9785367
ENSMUSG00000021171.9_0	chr12	+	5545	22	FSM	ENSMUSG00000021171.9	ENSMUST00000100986.4	5560	22	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTACTCGTAATATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116244824	116336705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_116245293_116281449_116281492_116282423_116282559_116284746_116284824_116287459_116287533_116287740_116287831_116297820_116297877_116303166_116303288_116305695_116305873_116307057_116307141_116310123_116310173_116311345_116311436_116311838_116311935_116320731_116320807_116321467_116321555_116327014_116327165_116329174_116329549_116330549_116330649_116331327_116331460_116332355_116332462_116333631_116333682_116333790
ENSMUSG00000021175.16_0	chr12	+	2939	10	FSM	ENSMUSG00000021175.16	ENSMUST00000021592.16	2957	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGACCATGTTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	117807260	117842434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_117807693_117828764_117828900_117833740_117833873_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640_117840778_117841201
ENSMUSG00000021175.16_4	chr12	+	1138	7	FSM	ENSMUSG00000021175.16	ENST00000373934.4	1145	7	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGAGTGTAACATAGT	NA	NA	NA	NA	NA	NA	NA	NA	117828764	117840773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_117828900_117835818_117836173_117837455_117837528_117837630_117837802_117838418_117838542_117839309_117839460_117840640
ENSMUSG00000021176.7_0	chr12	-	2060	6	FSM	ENSMUSG00000021176.7	ENSMUST00000046485.5	2068	6	5	3	5	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCATATTTATGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	99849696	99683793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540
ENSMUSG00000021176.7_7	chr12	-	1112	7	FSM	ENSMUSG00000021176.7	ENSMUST00000223114.2	1122	7	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTCATTGCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	99850662	99684935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_99685363_99820868_99820960_99821796_99821899_99844615_99844662_99849020_99849117_99849540_99849778_99850549
ENSMUSG00000021177.17_0	chr12	+	2009	15	FSM	ENSMUSG00000021177.17	ENSMUST00000021594.5	2019	15	3	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTAAAAATGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	99857434	99921466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99911498_99911608_99921221
ENSMUSG00000021177.17_7	chr12	+	1721	14	FSM	ENSMUSG00000021177.17	ENST00000555880.5	1733	14	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACGACTGAACATTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	99857441	99921294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_99858005_99859876_99859921_99860968_99861025_99864522_99864620_99868606_99868642_99872294_99872388_99875937_99876106_99876541_99876621_99877853_99878040_99878533_99878583_99880309_99880377_99881708_99881817_99901263_99901367_99921221
ENSMUSG00000021178.10_0	chr12	+	1588	11	FSM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGAGGGAAGAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	100076412	100089661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100076471_100078589_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_17	chr12	+	1527	10	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	2180	3	-719	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGAGGGAAGAGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	100078592	100089661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_100078644_100079314_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_28	chr12	+	1258	9	FSM	ENSMUSG00000021178.10	ENST00000495689.1	1266	9	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCCACAGTCGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	100079317	100089449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100079412_100081096_100081222_100081681_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_29	chr12	+	1267	9	ISM	ENSMUSG00000021178.10	ENSMUST00000021595.10	1591	11	2899	215	0	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCCACAGTCGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	100079311	100089449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_100079412_100081096_100081222_100081678_100081865_100082045_100082175_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021178.10_30	chr12	+	1225	9	FSM	ENSMUSG00000021178.10	ENST00000536820.1	1249	9	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAACAAGAAGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	100079319	100089410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100079412_100081096_100081222_100081678_100081865_100082045_100082180_100082957_100083055_100085331_100085522_100086245_100086398_100087251_100087407_100089316
ENSMUSG00000021179.9_0	chr12	-	3703	14	FSM	ENSMUSG00000021179.9	ENSMUST00000021596.9	3718	14	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGTGCAGCTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100125893	100091711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100615_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117469_100117594_100125798
ENSMUSG00000021179.9_9	chr12	-	3442	13	FSM	ENSMUSG00000021179.9	ENST00000354366.8	3454	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCTGGGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	100117586	100091859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100091991_100092459_100092532_100095553_100095693_100096616_100097543_100098409_100098797_100100611_100100792_100103916_100104038_100106263_100106398_100108151_100108558_100109997_100110449_100112128_100112288_100116075_100116310_100117484
ENSMUSG00000021182.17_0	chr12	-	7505	30	FSM	ENSMUSG00000021182.17	ENSMUST00000068411.5	7542	30	30	7	30	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGACTGAGCCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	100995285	100877788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100880065_100882836_100883130_100884587_100884657_100887785_100887855_100889438_100889628_100895085_100895325_100896773_100896864_100898026_100898173_100899417_100899605_100901884_100902029_100904088_100904367_100905255_100905418_100906343_100906530_100907367_100907495_100908255_100908384_100911105_100912168_100913358_100913497_100914705_100914891_100919545_100919691_100920422_100920570_100932197_100932357_100932638_100932721_100934066_100934252_100934512_100934654_100936650_100936735_100937479_100937539_100950158_100950229_100988552_100988662_100994494_100994596_100995030
ENSMUSG00000021185.17_0	chr12	+	3277	13	FSM	ENSMUSG00000021185.17	ENSMUST00000069782.11	3295	13	12	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAATTAAAAAAAAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	100745327	100838863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100745570_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_6	chr12	+	3163	15	FSM	ENSMUSG00000021185.17	ENSMUST00000110073.8	3184	15	5	16	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGTAAAGAGAAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	100745341	100838597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100745570_100752396_100752506_100753874_100753932_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021185.17_8	chr12	+	3040	14	FSM	ENSMUSG00000021185.17	ENSMUST00000110069.8	3058	14	8	10	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAAATCTTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	100745361	100838603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_100745570_100753874_100753932_100795857_100795985_100801443_100801595_100804758_100804958_100807629_100807781_100808901_100809025_100810988_100811190_100816371_100816633_100819472_100819573_100823179_100823329_100825791_100825912_100833362_100833515_100837562
ENSMUSG00000021186.10_0	chr12	-	5804	11	FSM	ENSMUSG00000021186.10	ENSMUST00000021603.9	5829	11	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGAAAACCAAAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	101785300	101712834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784992
ENSMUSG00000021186.10_3	chr12	-	2356	11	FSM	ENSMUSG00000021186.10	ENSMUST00000222587.2	2371	11	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTGAAGAAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101784727	101716210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101717163_101723514_101723711_101726959_101727087_101728060_101728184_101731414_101731535_101734651_101734769_101737503_101737627_101775974_101776230_101778412_101778465_101780800_101780856_101784491
ENSMUSG00000021188.15_0	chr12	-	9860	21	FSM	ENSMUSG00000021188.15	ENSMUST00000021605.14	9873	21	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGCTGTGTCTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	101879521	101800309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101804026_101811038_101811184_101811316_101811434_101811990_101812106_101812854_101812937_101828851_101828952_101838082_101838187_101839581_101839746_101844213_101844408_101845047_101845189_101849514_101852536_101853066_101853280_101855963_101856051_101856836_101856878_101859689_101860053_101860520_101860687_101861909_101861976_101865083_101865363_101868490_101868602_101872013_101872076_101878948
ENSMUSG00000021189.12_1	chr12	-	1075	7	ISM	ENSMUSG00000021189.12	ENST00000502250.5	1132	8	12724	0	2979	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATTGGGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101911719	101889037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_101889461_101892742_101892841_101899218_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658
ENSMUSG00000021189.12_2	chr12	-	1132	8	FSM	ENSMUSG00000021189.12	ENST00000502250.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCATTGGGGGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	101924443	101889037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101889461_101892742_101892841_101899218_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101924392
ENSMUSG00000021189.12_36	chr12	-	1256	10	FSM	ENSMUSG00000021189.12	ENST00000503767.5	1271	10	3	12	3	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATGAAAGAAACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	101924461	101889182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101889461_101892742_101892841_101899218_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914533_101914699_101924392
ENSMUSG00000021189.12_37	chr12	-	1147	10	FSM	ENSMUSG00000021189.12	ENST00000340660.10	1164	10	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATGAAAGAAACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	101924472	101889182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101889461_101892742_101892841_101899218_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912179_101914262_101914308_101924392
ENSMUSG00000021189.12_73	chr12	-	1064	9	FSM	ENSMUSG00000021189.12	ENST00000523800.1	1092	9	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAGAAAGAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	101914687	101889386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101889461_101892742_101892864_101899214_101899324_101900506_101900674_101903595_101903729_101908375_101908464_101911658_101911726_101912092_101912244_101914533
ENSMUSG00000021190.15_0	chr12	-	1825	13	FSM	ENSMUSG00000021190.15	ENSMUST00000110020.8	1835	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGGCTTTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	102390018	102360342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843
ENSMUSG00000021190.15_3	chr12	-	1974	14	FSM	ENSMUSG00000021190.15	ENSMUST00000021607.9	1990	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGACATTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102406062	102360362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102360872_102361100_102361169_102361902_102362074_102364441_102364643_102366163_102366254_102366396_102366516_102368143_102368211_102368928_102368992_102369685_102369762_102370518_102370605_102372054_102372137_102379723_102379822_102389843_102390015_102405889
ENSMUSG00000021192.17_0	chr12	+	2814	13	FSM	ENSMUSG00000021192.17	ENSMUST00000179218.9	2827	13	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102435403	102464161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102435623_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ENSMUSG00000021192.17_2	chr12	+	3375	13	FSM	ENSMUSG00000021192.17	ENSMUST00000021609.10	3390	13	10	5	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTAGAGTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	102435460	102464161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102436241_102438256_102438825_102440804_102441033_102442428_102442649_102443055_102443180_102445856_102446061_102450662_102450834_102453378_102453508_102455677_102455777_102458271_102458498_102460012_102460119_102461958_102462023_102463705
ENSMUSG00000021193.11_0	chr13	+	3312	26	FSM	ENSMUSG00000021193.11	ENSMUST00000021611.10	3318	26	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTCTGAGTTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	6598184	6630072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_6598266_6599618_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_25	chr13	+	3826	26	ISM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	1430	0	1430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6599616	6630551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_29	chr13	+	2924	24	FSM	ENSMUSG00000021193.11	ENST00000380989.6	2940	24	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCATAAAATAATGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	6602676	6629766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618825_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_42	chr13	+	2720	22	FSM	ENSMUSG00000021193.11	ENST00000678436.1	2738	22	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCATAAAATAATGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	6602678	6629766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_46	chr13	+	2803	23	FSM	ENSMUSG00000021193.11	ENST00000678441.1	2814	23	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATAAAATAATGAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	6602672	6629767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618825_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623258_6625052_6625166_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021193.11_7	chr13	+	3903	27	FSM	ENSMUSG00000021193.11	ENSMUST00000222485.2	3906	27	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGGTTGTTACCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	6598189	6630551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_6598266_6599615_6599719_6602669_6602777_6603217_6603370_6605389_6605505_6605587_6605685_6606577_6606739_6607797_6607925_6608191_6608281_6609390_6609520_6610065_6610180_6610637_6610735_6611988_6612124_6613411_6613551_6615026_6615144_6617385_6617519_6618699_6618821_6618934_6619012_6619235_6619402_6620637_6620739_6623076_6623198_6624395_6624468_6625052_6625166_6627425_6627552_6628476_6628623_6629453_6629557_6629685
ENSMUSG00000021196.15_0	chr13	-	4128	22	FSM	ENSMUSG00000021196.15	ENSMUST00000138703.8	4145	22	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATACTCAAAGATATGT	NA	NA	NA	NA	NA	NA	NA	NA	6698800	6629807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6647894_6648048_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021196.15_11	chr13	-	2665	22	FSM	ENSMUSG00000021196.15	ENSMUST00000021614.14	2679	22	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCCCATGGTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	6698747	6631217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_6631629_6632438_6632542_6634636_6634737_6636515_6636628_6637087_6637150_6638524_6638690_6643136_6643290_6648774_6648863_6650631_6650703_6652748_6652896_6653114_6653185_6653434_6653500_6654991_6655118_6655671_6655765_6664739_6664836_6669210_6669320_6669555_6669601_6670921_6671088_6671942_6672133_6675171_6675250_6685960_6686035_6698606
ENSMUSG00000021198.17_0	chr12	+	9090	51	FSM	ENSMUSG00000021198.17	ENST00000553484.5	9116	51	21	5	21	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTACTATCTTTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	102915679	103150855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102915835_102957608_102957730_102964696_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103062809_103062876_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021198.17_21	chr12	+	7873	49	ISM	ENSMUSG00000021198.17	ENST00000393151.6	7908	50	41805	4	9	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGACTCCTCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102957617	103149868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_102957730_102964696_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021198.17_31	chr12	+	8103	49	FSM	ENSMUSG00000021198.17	ENST00000256339.8	8115	49	9	3	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTTGTAGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102957617	103150257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102957730_102964855_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021198.17_7	chr12	+	7904	50	FSM	ENSMUSG00000021198.17	ENST00000393151.6	7908	50	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGGACTCCTCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	102915812	103149868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102915835_102957608_102957730_102964696_102965002_102968064_102968236_102977458_102977552_102987265_102987322_102988005_102988136_103008373_103008439_103013214_103013304_103013916_103013958_103016153_103016183_103025577_103025808_103027603_103027776_103029363_103029595_103036276_103036468_103037000_103037125_103038918_103039060_103041020_103041243_103045099_103045328_103049756_103049899_103054707_103054788_103054881_103055031_103058272_103058431_103058888_103059071_103060450_103060653_103061216_103061397_103070867_103071155_103074374_103074558_103074874_103075038_103078280_103079502_103088594_103088703_103091867_103091985_103094487_103094572_103097814_103097918_103100663_103100805_103101928_103101968_103108030_103108144_103108237_103108324_103108845_103109020_103112560_103112630_103115229_103115341_103122714_103122820_103128071_103128150_103131888_103131979_103134533_103134710_103135825_103136013_103137830_103138029_103139711_103139790_103148421_103148464_103149671
ENSMUSG00000021200.15_0	chr12	-	2671	10	FSM	ENSMUSG00000021200.15	ENSMUST00000021617.14	2690	10	11	8	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGAATTTCTGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	103322249	103287408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103287934_103290021_103290176_103291311_103291874_103296603_103296776_103299550_103299797_103301107_103301264_103302068_103302236_103304335_103304441_103311914_103312192_103321942
ENSMUSG00000021203.16_0	chr12	+	2771	6	FSM	ENSMUSG00000021203.16	ENSMUST00000021620.13	2791	6	12	8	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACAACTGTCAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	103354968	103372596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_103355133_103366454_103366551_103367207_103367327_103369075_103369161_103369492_103369688_103370484
ENSMUSG00000021208.10_0	chr12	-	1081	7	FSM	ENSMUSG00000021208.10	ENSMUST00000044687.7	1093	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTTGAGGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	103423470	103417156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103417612_103418064_103418227_103418729_103418760_103421980_103422164_103422616_103422779_103423273_103423304_103423411
ENSMUSG00000021208.10_2	chr12	-	1022	6	ISM	ENSMUSG00000021208.10	ENSMUST00000044687.7	1093	7	179	0	179	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGCTTGAGGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	103423303	103417156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_103417612_103418064_103418227_103418729_103418760_103421980_103422164_103422616_103422779_103423273
ENSMUSG00000021209.13_0	chr12	+	641	5	FSM	ENSMUSG00000021209.13	ENST00000328839.3	658	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGCATTTCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103498759	103539680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_103499002_103500329_103500404_103524626_103524730_103539343_103539420_103539534
ENSMUSG00000021210.17_0	chr13	+	752	6	ISM	ENSMUSG00000021210.17	ENSMUST00000021630.15	1396	9	1982	8054	10	-5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	3293	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGATGAGTTGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4486286	4499475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_4486447_4488488_4488606_4496350_4496429_4497006_4497130_4498983_4499094_4499311
ENSMUSG00000021210.17_2	chr13	+	671	5	NIC	ENSMUSG00000021210.17	novel	1396	9	NA	NA	13	-5	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGATGAGTTGCTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4486289	4499475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_4486447_4488488_4488606_4497006_4497130_4498983_4499094_4499311
ENSMUSG00000021213.13_0	chr13	+	1253	9	FSM	ENSMUSG00000021213.13	ENSMUST00000021634.4	1262	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATATTTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4241157	4255595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_4241310_4244032_4244201_4244675_4244793_4246431_4246510_4246987_4247111_4247799_4247910_4248476_4248643_4253365_4253449_4255339
ENSMUSG00000021215.16_0	chr13	-	3861	10	FSM	ENSMUSG00000021215.16	ENSMUST00000099946.6	3871	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCAGCATTTCTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	3943568	3932017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3943292
ENSMUSG00000021215.16_7	chr13	-	2662	12	FSM	ENSMUSG00000021215.16	ENSMUST00000091853.12	2680	12	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTTCCTCCTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	3968202	3933332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_3934474_3934802_3934990_3936047_3936219_3936537_3936796_3937370_3937448_3937570_3937668_3937977_3938041_3938354_3938523_3938870_3938979_3957796_3957857_3962867_3962935_3967937
ENSMUSG00000021216.8_0	chr13	+	1377	3	FSM	ENSMUSG00000021216.8	ENST00000380419.8	1392	3	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATATATCTAATGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	3978102	3983615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_3978333_3980536_3980690_3982621
ENSMUSG00000021217.8_0	chr7	+	5083	2	FSM	ENSMUSG00000021217.8	ENSMUST00000021641.8	5098	2	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTGACTCGGTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36397556	36472977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_36397715_36468052
ENSMUSG00000021218.11_0	chr13	+	4289	11	FSM	ENSMUSG00000021218.11	ENSMUST00000223396.2	4303	11	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGCCTGTGCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	3588073	3617868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3604411_3604547_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021218.11_17	chr13	+	1269	10	FSM	ENSMUSG00000021218.11	ENST00000380181.7	1276	10	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATGTATATTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	3588278	3615188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_3588344_3598862_3598971_3600988_3601089_3606313_3606513_3606925_3607058_3609991_3610092_3611865_3612038_3614539_3614685_3614858_3614914_3614995
ENSMUSG00000021219.17_0	chr12	+	1415	16	FSM	ENSMUSG00000021219.17	ENST00000404301.6	1423	16	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCAAGGCCCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	83032074	83184447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83032169_83094332_83094384_83098052_83098160_83099265_83099318_83106519_83106585_83110195_83110273_83112727_83112810_83114186_83114262_83116268_83116368_83117371_83117434_83138521_83138633_83153531_83153658_83162886_83163074_83180428_83180519_83184159_83184214_83184364
ENSMUSG00000021219.17_15	chr12	+	1324	15	ISM	ENSMUSG00000021219.17	ENST00000404301.6	1423	16	62261	2	62261	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCAAGGCCCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	83094329	83184447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_83094384_83098052_83098160_83099265_83099318_83106519_83106585_83110195_83110273_83112727_83112810_83114186_83114262_83116268_83116368_83117371_83117434_83138521_83138633_83153531_83153658_83162886_83163074_83180428_83180519_83184159_83184214_83184364
ENSMUSG00000021222.10_1	chr12	+	2001	14	FSM	ENSMUSG00000021222.10	ENSMUST00000021645.9	2008	14	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTCTAATTTTGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	83567246	83588689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83567392_83572917_83573015_83575941_83576043_83576750_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_11	chr12	+	774	5	ISM	ENSMUSG00000021222.10	ENST00000353777.7	801	6	12	16495	12	1	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576760	83588331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_83576909_83580640_83580785_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_7	chr12	+	1270	11	ISM	ENSMUSG00000021222.10	ENST00000555042.5	1296	12	11	16495	11	1	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTCCAGACAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	83576759	83588331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_83576909_83577597_83577681_83579052_83579156_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584795_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021222.10_8	chr12	+	1096	9	FSM	ENSMUSG00000021222.10	ENST00000509153.5	1115	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCGTCTTGTCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	83576761	83588324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83576909_83580640_83580785_83581633_83581684_83582673_83582754_83584486_83584589_83584717_83584816_83586081_83586256_83586562_83586678_83588138
ENSMUSG00000021224.16_0	chr12	-	3530	11	FSM	ENSMUSG00000021224.16	ENSMUST00000117217.8	3549	11	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTTTATAGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83968694	83840812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83842929_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213_83902299_83923441_83923587_83968591
ENSMUSG00000021224.16_10	chr12	-	1374	7	ISM	ENSMUSG00000021224.16	ENST00000559312.5	1413	8	13115	5	-5	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTCTCTGTGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83889122	83842214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_83842929_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991
ENSMUSG00000021224.16_12	chr12	-	1408	8	FSM	ENSMUSG00000021224.16	ENST00000559312.5	1413	8	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTCTCTGTGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83902237	83842214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83842929_83850553_83850759_83854874_83855016_83858059_83858135_83872032_83872066_83878695_83878771_83888991_83889133_83902213
ENSMUSG00000021224.16_2	chr12	-	3387	10	FSM	ENSMUSG00000021224.16	ENST00000557597.5	3397	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTTTTGCCCATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	83902291	83840847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83842929_83843970_83844118_83846281_83846432_83847786_83848081_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213
ENSMUSG00000021224.16_8	chr12	-	1493	7	ISM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	13113	5	-7	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTCTCTGTGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83889124	83842214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_83842929_83846281_83846432_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991
ENSMUSG00000021224.16_9	chr12	-	1525	8	FSM	ENSMUSG00000021224.16	ENST00000555738.6	1530	8	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGTCTCTGTGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	83902237	83842214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83842929_83846281_83846432_83850553_83850759_83854874_83855016_83858059_83858135_83878695_83878771_83888991_83889133_83902213
ENSMUSG00000021226.8_0	chr12	+	2174	3	FSM	ENSMUSG00000021226.8	ENSMUST00000021649.8	2196	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAGACAAAACTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	84034647	84040638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84035256_84037267_84037471_84039275
ENSMUSG00000021234.10_0	chr12	-	523	4	FSM	ENSMUSG00000021234.10	ENST00000555916.1	532	4	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTATGGAGAAATTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84395505	84385910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84386067_84393568_84393710_84395050_84395151_84395379
ENSMUSG00000021235.14_0	chr12	+	1751	13	FSM	ENSMUSG00000021235.14	ENSMUST00000110276.8	1776	13	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAGAACTTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84408446	84420557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84408594_84408726_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUSG00000021235.14_4	chr12	+	1584	12	FSM	ENSMUSG00000021235.14	ENSMUST00000021661.13	1602	12	10	8	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTTGTGTCTCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84408751	84420562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84409012_84413658_84413794_84414916_84414976_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUSG00000021235.14_6	chr12	+	1214	10	FSM	ENSMUSG00000021235.14	ENST00000629426.2	1230	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGGGCCTTCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	84413668	84420521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84413794_84415359_84415484_84417029_84417161_84417697_84417806_84417881_84417945_84418224_84418333_84418912_84419116_84419192_84419309_84419424_84419592_84420452
ENSMUSG00000021236.17_0	chr12	-	4901	15	FSM	ENSMUSG00000021236.17	ENSMUST00000021662.12	4931	15	5	25	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATAGTTTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84452245	84420655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179
ENSMUSG00000021236.17_10	chr12	-	4877	15	FSM	ENSMUSG00000021236.17	ENSMUST00000120942.8	4881	15	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATAGTTTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84455788	84420655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179_84452250_84455743
ENSMUSG00000021236.17_2	chr12	-	4823	14	FSM	ENSMUSG00000021236.17	ENSMUST00000072061.12	4858	14	10	25	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATAGTTTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84452240	84420655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84452179
ENSMUSG00000021236.17_3	chr12	-	4788	13	ISM	ENSMUSG00000021236.17	ENSMUST00000122194.8	2145	15	3975	-2820	3926	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTAGCTGTCACTATTT	NA	NA	NA	NA	NA	NA	NA	NA	84443733	84420630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452
ENSMUSG00000021236.17_6	chr12	-	4965	16	FSM	ENSMUSG00000021236.17	ENSMUST00000110272.9	4972	16	0	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATAGTTTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84455803	84420655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84424155_84425953_84426070_84427094_84427152_84429005_84429147_84430992_84431095_84431921_84431984_84432570_84432651_84432911_84433001_84433511_84433548_84433753_84433830_84439179_84439324_84441397_84441478_84443452_84443733_84446113_84446187_84452179_84452250_84455743
ENSMUSG00000021238.12_0	chr12	-	3376	12	FSM	ENSMUSG00000021238.12	ENSMUST00000085192.7	3399	12	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGAAAAAAGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84497767	84477503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84479323_84480205_84480305_84480629_84480810_84483101_84483284_84483502_84483693_84484748_84484871_84486186_84486490_84487008_84487088_84488536_84488699_84488844_84488920_84490502_84490563_84497662
ENSMUSG00000021240.7_14	chr12	-	635	6	FSM	ENSMUSG00000021240.7	ENST00000557588.5	653	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCACAGAGCTTAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84662209	84655781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84655871_84658494_84658546_84659553_84659671_84660678_84660819_84661850_84661979_84662099
ENSMUSG00000021240.7_4	chr12	-	2376	18	FSM	ENSMUSG00000021240.7	ENSMUST00000223107.2	2410	18	5	29	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84664182	84649442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84649934_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84663895
ENSMUSG00000021240.7_5	chr12	-	2285	19	FSM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84664136	84649442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099_84662219_84664056
ENSMUSG00000021240.7_7	chr12	-	2205	18	ISM	ENSMUSG00000021240.7	ENSMUST00000021666.6	2309	19	1926	16	3	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	84662218	84649442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_84649934_84650067_84650184_84650722_84650800_84651106_84651160_84651754_84651805_84652121_84652159_84652645_84652738_84652873_84653083_84655343_84655434_84655579_84655672_84655748_84655871_84656152_84656248_84658494_84658546_84659098_84659225_84659553_84659671_84660678_84660819_84661850_84661979_84662099
ENSMUSG00000021241.8_0	chr12	+	865	4	FSM	ENSMUSG00000021241.8	ENSMUST00000021667.7	883	4	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTATAAACTAAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84820031	84821848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84820146_84820348_84820452_84820566_84820683_84821316
ENSMUSG00000021242.10_0	chr12	-	3281	4	FSM	ENSMUSG00000021242.10	ENSMUST00000021668.10	3299	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTTCAGATCCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	84819915	84801342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84803987_84807493_84807667_84812050_84812159_84819559
ENSMUSG00000021243.15_0	chr12	+	740	8	FSM	ENSMUSG00000021243.15	ENSMUST00000021669.15	749	8	2	7	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85017672	85030070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85017740_85017988_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000021243.15_7	chr12	+	671	7	ISM	ENSMUSG00000021243.15	ENSMUST00000171040.2	731	8	236	-5	236	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCTATGTTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85017990	85030070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_85018057_85019763_85019836_85020864_85021014_85026168_85026242_85027288_85027377_85029009_85029105_85029942
ENSMUSG00000021244.16_0	chr12	+	4881	20	FSM	ENSMUSG00000021244.16	ENSMUST00000168977.8	4893	20	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGCCAATGAGATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	85043096	85117256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ENSMUSG00000021244.16_1	chr12	+	4590	21	FSM	ENSMUSG00000021244.16	ENSMUST00000101202.10	4605	21	10	5	10	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTATGGGCCCTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85043273	85117283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85043834_85043974_85044131_85059662_85059900_85060677_85060897_85061423_85062368_85080690_85080809_85087346_85087768_85088596_85088690_85088895_85089086_85089715_85089835_85091143_85091299_85095582_85095646_85095906_85096027_85096465_85096643_85096717_85096802_85097062_85097147_85103995_85104077_85107036_85107089_85111744_85111876_85116392_85116574_85116878
ENSMUSG00000021245.16_0	chr12	-	5440	12	FSM	ENSMUSG00000021245.16	ENSMUST00000019378.8	5463	12	6	17	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACTAAAAAATAATGG	NA	NA	NA	NA	NA	NA	NA	NA	85317367	85281310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317312
ENSMUSG00000021245.16_1	chr12	-	5362	11	ISM	ENSMUSG00000021245.16	ENSMUST00000166821.8	5420	12	1135	13	1135	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAATAAAACACTAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85316230	85281315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925
ENSMUSG00000021245.16_2	chr12	-	5408	12	FSM	ENSMUSG00000021245.16	ENSMUST00000166821.8	5420	12	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAACACTAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	85317364	85281313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85282504_85284288_85284441_85287571_85287651_85287733_85287758_85292536_85292697_85294385_85294498_85297075_85297148_85305966_85306040_85307573_85307679_85308434_85308527_85312925_85316249_85317338
ENSMUSG00000021248.10_0	chr12	-	1465	5	FSM	ENSMUSG00000021248.10	ENSMUST00000040766.9	1482	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTGAAGTCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	85421611	85389568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85390324_85390998_85391126_85397576_85397651_85401568_85401681_85421214
ENSMUSG00000021250.14_0	chr12	+	2097	4	FSM	ENSMUSG00000021250.14	ENSMUST00000021674.7	2108	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCGACCACCTTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85520668	85524041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85520955_85521708_85521961_85522365_85522474_85522590
ENSMUSG00000021252.12_0	chr12	-	1163	5	FSM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCCGTCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85871296	85862227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861_85869023_85871244
ENSMUSG00000021252.12_1	chr12	-	1099	4	ISM	ENSMUSG00000021252.12	ENSMUST00000021676.12	1169	5	2286	6	2286	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGATCCGTCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85869010	85862227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_85862968_85863089_85863209_85866252_85866344_85868861
ENSMUSG00000021253.8_0	chr12	-	3364	7	FSM	ENSMUSG00000021253.8	ENSMUST00000003687.8	3383	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTATGTTTGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	86125802	86103524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_86104713_86105673_86105828_86108801_86108974_86110594_86110703_86116120_86116251_86116520_86116685_86124354
ENSMUSG00000021254.10_0	chr12	+	4342	10	FSM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGGTGCTTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	86288638	86338552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ENSMUSG00000021254.10_1	chr12	+	3826	9	FSM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTGTCTTGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	86288648	86338141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_86288719_86290808_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ENSMUSG00000021254.10_2	chr12	+	4256	9	ISM	ENSMUSG00000021254.10	ENSMUST00000221368.2	4355	10	2183	6	2166	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCATGGTGCTTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	86290814	86338552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86328222_86328318_86335573
ENSMUSG00000021254.10_3	chr12	+	3752	8	ISM	ENSMUSG00000021254.10	ENSMUST00000071106.6	3829	9	2159	8	2159	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACATCTGTGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	86290807	86338136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_86291481_86303641_86303707_86307350_86307528_86308389_86308470_86311955_86312024_86313917_86313958_86315749_86315836_86335573
ENSMUSG00000021257.15_0	chr12	-	3848	10	FSM	ENSMUSG00000021257.15	ENSMUST00000021682.9	3850	10	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTGTTAGCCTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	86773233	86747276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_86749216_86749930_86750095_86752040_86752111_86763689_86763801_86764488_86764616_86767003_86767438_86768084_86768155_86768614_86768842_86769618_86770195_86773103
ENSMUSG00000021258.11_0	chr12	+	2152	12	FSM	ENSMUSG00000021258.11	ENST00000389879.9	2169	12	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108146070	108170221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108146140_108152634_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334_108168848_108169824
ENSMUSG00000021258.11_6	chr12	+	2084	11	ISM	ENSMUSG00000021258.11	ENST00000389879.9	2169	12	6565	15	6565	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108152633	108170221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_108152882_108153437_108153520_108155323_108155456_108159930_108160037_108160600_108160659_108161325_108161496_108161841_108162111_108162597_108162632_108165567_108165643_108168334_108168848_108169824
ENSMUSG00000021259.6_0	chr12	+	2109	15	FSM	ENSMUSG00000021259.6	ENSMUST00000021684.6	2118	15	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATGAATGTACGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	108300642	108328487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108300824_108308581_108308663_108309272_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ENSMUSG00000021259.6_2	chr12	+	1569	15	FSM	ENSMUSG00000021259.6	ENST00000380228.6	1582	15	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGTCCCCTCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108301000	108328057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108301072_108308581_108308663_108309272_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ENSMUSG00000021259.6_4	chr12	+	1496	14	ISM	ENSMUSG00000021259.6	ENST00000380228.6	1582	15	7590	6	7590	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGTCCCCTCGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	108308583	108328057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_108308663_108309272_108309355_108311832_108311907_108312347_108312435_108317440_108317580_108318172_108318284_108319032_108319184_108319348_108319412_108321682_108321756_108323745_108323831_108324289_108324401_108326739_108326829_108327454_108327522_108327772
ENSMUSG00000021260.9_0	chr12	+	5162	9	FSM	ENSMUSG00000021260.9	ENSMUST00000021685.8	5174	9	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	108272538	108297126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108272943_108277946_108278594_108282709_108282854_108284712_108285042_108285584_108285712_108286214_108286361_108288061_108288144_108293384_108293468_108293926
ENSMUSG00000021262.16_0	chr12	+	2098	13	FSM	ENSMUSG00000021262.16	ENSMUST00000077735.13	2121	13	17	6	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAACTCAGGCTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108520995	108654769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108652308_108652376_108652666_108652725_108654287
ENSMUSG00000021262.16_1	chr12	+	2163	14	FSM	ENSMUSG00000021262.16	ENSMUST00000021689.14	2180	14	14	3	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCAGGCTCTGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	108520996	108654772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108521473_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ENSMUSG00000021262.16_3	chr12	+	1943	15	FSM	ENSMUSG00000021262.16	ENSMUST00000172409.2	1955	15	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCCAAACTCAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108602016	108654765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108602144_108602507_108602644_108614573_108614743_108619180_108619359_108639547_108639612_108640665_108640725_108641655_108641886_108642360_108642483_108646087_108646149_108647749_108647814_108649453_108649521_108649606_108649670_108652308_108652376_108652666_108652725_108654287
ENSMUSG00000021264.13_0	chr12	+	6169	5	FSM	ENSMUSG00000021264.13	ENSMUST00000021692.9	6178	5	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGCCTGTGTTCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108758905	108786072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108760018_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUSG00000021264.13_5	chr12	+	642	5	FSM	ENSMUSG00000021264.13	ENST00000427625.1	659	5	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACCAGTGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	108759930	108781566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108760022_108772404_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUSG00000021264.13_9	chr12	+	551	4	ISM	ENSMUSG00000021264.13	ENST00000427625.1	659	5	12478	13	12478	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAACCAGTGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	108772404	108781566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_108772568_108778844_108778906_108780531_108780691_108781398
ENSMUSG00000021265.4_0	chr12	-	1961	4	FSM	ENSMUSG00000021265.4	ENSMUST00000021693.4	1976	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTGAAGCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108801799	108791803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108793415_108793599_108793684_108797122_108797167_108801577
ENSMUSG00000021266.17_0	chr12	-	2723	9	ISM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	4652	0	4651	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108854472	108825955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301
ENSMUSG00000021266.17_1	chr12	-	2764	10	FSM	ENSMUSG00000021266.17	ENSMUST00000161410.8	2764	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108859124	108825955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859085
ENSMUSG00000021266.17_14	chr12	-	1915	10	FSM	ENSMUSG00000021266.17	ENST00000355338.6	1931	10	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATGTCTCTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108860436	108827195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833700_108841034_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108860007
ENSMUSG00000021266.17_16	chr12	-	1299	8	FSM	ENSMUSG00000021266.17	ENST00000344102.9	1318	8	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAATGTCTCTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108848820	108827195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833700_108841034_108841223_108841591_108841712_108846968_108847078_108848620
ENSMUSG00000021266.17_2	chr12	-	2822	10	FSM	ENSMUSG00000021266.17	ENSMUST00000109848.10	2831	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCACTGTCTGACCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108860091	108825955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108827353_108828728_108828870_108831938_108832226_108833602_108833704_108841039_108841223_108841591_108841712_108846968_108847078_108848620_108848835_108854301_108854475_108859994
ENSMUSG00000021268.18_0	chr12	+	1254	5	FSM	ENSMUSG00000021268.18	ENST00000398518.6	1270	5	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCCGCAATGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	109510057	109538083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_109510626_109512312_109512426_109513375_109513539_109524603_109524755_109537824
ENSMUSG00000021268.18_4	chr12	+	226	2	FSM	ENSMUSG00000021268.18	ENST00000648950.1	239	2	7	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTGGCTGAGGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	109512332	109513508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_109512426_109513375
ENSMUSG00000021270.14_0	chr12	-	3260	11	FSM	ENSMUSG00000021270.14	ENSMUST00000094361.11	3281	11	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAACCAAACCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110662820	110657050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662115_110662685
ENSMUSG00000021270.14_15	chr12	-	2837	11	FSM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGATAAAAAGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110662723	110657476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952_110662215_110662685
ENSMUSG00000021270.14_16	chr12	-	2793	10	ISM	ENSMUSG00000021270.14	ENSMUST00000021698.13	2852	11	515	15	515	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGATAAAAAGAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110662208	110657476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110658084_110658547_110658882_110659037_110659307_110659453_110659602_110659745_110659937_110660144_110660311_110660456_110660778_110661004_110661139_110661485_110661853_110661952
ENSMUSG00000021271.6_0	chr12	+	3694	8	FSM	ENSMUSG00000021271.6	ENSMUST00000170060.4	3723	8	24	5	24	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTCTTGCTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	110816736	110836425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110816998_110821433_110822307_110827229_110827458_110830397_110830491_110831289_110831440_110832673_110832803_110833141_110833260_110834583
ENSMUSG00000021273.12_0	chr14	-	3637	9	ISM	ENSMUSG00000021273.12	ENSMUST00000224625.2	3698	10	607	3	607	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGAAGGTTTTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	63416420	63382601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131_63415941_63416341
ENSMUSG00000021273.12_1	chr14	-	3695	10	FSM	ENSMUSG00000021273.12	ENSMUST00000224625.2	3698	10	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGAAGGTTTTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	63417027	63382601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980_63402079_63415131_63415941_63416341_63416427_63416975
ENSMUSG00000021273.12_3	chr14	-	3035	7	FSM	ENSMUSG00000021273.12	ENSMUST00000238526.2	3048	7	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCGAAGGTTTTAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	63402364	63382601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_63384418_63388598_63388752_63389775_63389953_63394007_63394200_63396466_63396596_63400750_63400935_63401980
ENSMUSG00000021275.17_0	chr12	+	7766	20	FSM	ENSMUSG00000021275.17	ENSMUST00000165978.3	7778	20	0	12	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAAACTCAATTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	110855697	110938816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110855761_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ENSMUSG00000021275.17_3	chr12	+	7759	20	ISM	ENSMUSG00000021275.17	ENSMUST00000169597.9	7780	21	6161	8	6161	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTCAATTCTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	110861906	110938818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_110861961_110862520_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ENSMUSG00000021275.17_5	chr12	+	7704	19	ISM	ENSMUSG00000021275.17	ENSMUST00000169597.9	7780	21	6773	11	6773	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAAACTCAATTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110862518	110938815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_110862809_110881083_110881213_110881780_110881913_110885302_110885461_110892597_110892911_110895465_110895599_110897833_110898167_110899050_110900067_110902709_110902894_110904624_110904799_110906190_110906372_110907886_110908029_110911078_110911320_110912755_110912846_110914135_110914370_110921107_110921257_110934169_110934312_110934725_110934876_110935302
ENSMUSG00000021276.11_0	chr12	-	2025	5	FSM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTTTTTCCTGTCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	110855576	110839044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_1	chr12	-	1951	4	ISM	ENSMUSG00000021276.11	ENSMUST00000043716.9	2029	5	5085	0	5037	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCCTGTCTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	110850494	110839043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110840564_110843274_110843405_110846118_110846249_110850323
ENSMUSG00000021276.11_4	chr12	-	708	5	FSM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATAAAATGCAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110855550	110841482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323_110850493_110855499
ENSMUSG00000021276.11_5	chr12	-	661	4	ISM	ENSMUSG00000021276.11	ENSMUST00000222457.2	723	5	5056	13	5037	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAATGCAAGAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	110850494	110841480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110841711_110843274_110843405_110846118_110846249_110850323
ENSMUSG00000021277.17_0	chr12	+	6964	10	FSM	ENSMUSG00000021277.17	ENSMUST00000117269.8	6972	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTCTGGCTGTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	111132811	111233587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111133037_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ENSMUSG00000021277.17_1	chr12	+	3745	11	ISM	ENSMUSG00000021277.17	ENST00000560371.5	3777	12	6	39515	6	-3246	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCATCTGTCCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	111132850	111230332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_111133037_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ENSMUSG00000021277.17_18	chr12	+	7052	12	FSM	ENSMUSG00000021277.17	ENSMUST00000021706.11	7060	12	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAGAGTCCGGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	111132896	111233574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111133037_111186244_111186356_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922
ENSMUSG00000021277.17_2	chr12	+	3764	12	FSM	ENSMUSG00000021277.17	ENST00000560371.5	3777	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGGAATGTCCCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	111132852	111269842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111133037_111203995_111204255_111205462_111205515_111208876_111208982_111209804_111209973_111214999_111215081_111217563_111217639_111219097_111219191_111221656_111221798_111227070_111227246_111227922_111230333_111269821
ENSMUSG00000021279.6_0	chr12	-	6697	37	FSM	ENSMUSG00000021279.6	ENSMUST00000041965.5	6714	37	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTCTCAGGGGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	111344141	111259415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111260667_111261327_111261399_111261489_111261596_111262172_111262291_111262381_111262500_111262642_111262728_111262813_111262912_111265516_111266117_111268243_111268307_111268447_111268665_111270263_111270346_111271405_111271546_111272099_111272237_111272875_111272982_111274212_111274291_111274541_111274632_111277920_111278001_111279760_111279856_111280857_111281007_111283892_111283999_111284341_111284467_111284869_111284976_111285062_111285308_111286411_111286523_111287397_111287641_111287904_111288039_111289236_111289357_111289440_111289608_111291417_111291498_111292393_111292643_111293849_111294051_111295572_111295667_111302459_111302609_111306254_111306351_111308459_111308544_111311965_111312058_111343530
ENSMUSG00000021280.10_0	chr12	+	3408	13	FSM	ENSMUSG00000021280.10	ENSMUST00000223050.2	3418	13	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCACTGTGTGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	111383867	111398106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111384189_111387932_111388018_111388496_111388913_111389826_111390482_111391596_111391709_111391927_111392051_111392332_111392434_111392565_111392647_111394353_111394469_111394891_111395012_111395090_111395244_111395848_111395971_111397102
ENSMUSG00000021280.10_2	chr12	+	2759	14	FSM	ENSMUSG00000021280.10	ENSMUST00000072646.8	2778	14	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGTACAAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	111383887	111397606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111383955_111385193_111385299_111387932_111388018_111388496_111388913_111389826_111390482_111391596_111391709_111391927_111392051_111392332_111392434_111392565_111392647_111394353_111394469_111394891_111395012_111395090_111395244_111395848_111395971_111397102
ENSMUSG00000021280.10_3	chr12	+	2690	13	ISM	ENSMUSG00000021280.10	ENSMUST00000072646.8	2778	14	1313	14	1313	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAATAGTGTACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	111385191	111397602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_111385299_111387932_111388018_111388496_111388913_111389826_111390482_111391596_111391709_111391927_111392051_111392332_111392434_111392565_111392647_111394353_111394469_111394891_111395012_111395090_111395244_111395848_111395971_111397102
ENSMUSG00000021280.10_4	chr12	+	2651	12	FSM	ENSMUSG00000021280.10	ENSMUST00000222897.2	2665	12	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAATAGTGTACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	111387994	111397602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111388018_111388366_111388913_111389826_111390482_111391596_111391709_111391927_111392051_111392332_111392434_111392565_111392647_111394353_111394469_111394891_111395012_111395090_111395244_111395848_111395971_111397102
ENSMUSG00000021280.10_5	chr12	+	2621	11	ISM	ENSMUSG00000021280.10	ENSMUST00000222897.2	2665	12	383	10	383	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTGTACAAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	111388377	111397606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_111388913_111389826_111390482_111391596_111391709_111391927_111392051_111392332_111392434_111392565_111392647_111394353_111394469_111394891_111395012_111395090_111395244_111395848_111395971_111397102
ENSMUSG00000021281.16_0	chr12	+	3747	12	FSM	ENSMUSG00000021281.16	ENSMUST00000102745.10	3762	12	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGACTGTGGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	111408909	111421444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111409118_111411362_111411718_111411940_111412572_111414416_111414532_111414680_111414804_111414972_111415074_111415664_111415764_111416199_111416324_111417116_111417240_111417476_111417633_111417784_111417907_111419854
ENSMUSG00000021282.18_0	chr12	+	4034	12	FSM	ENSMUSG00000021282.18	ENSMUST00000166123.9	4050	12	12	4	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATCACTTGGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111504461	111513182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111504674_111504788_111504983_111505841_111506122_111506234_111506317_111506563_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_11	chr12	+	1244	10	FSM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAGAATGGATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	111506051	111511046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111506122_111506234_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021282.18_15	chr12	+	1171	9	ISM	ENSMUSG00000021282.18	ENST00000400019.2	1249	10	188	3	188	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAGAATGGATGCAA	NA	NA	NA	NA	NA	NA	NA	NA	111506237	111511046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_111506317_111506601_111506737_111506894_111507007_111508139_111508280_111508585_111508745_111509113_111509276_111509533_111509699_111509960_111510096_111510962
ENSMUSG00000021285.16_0	chr12	-	4378	17	FSM	ENSMUSG00000021285.16	ENSMUST00000054815.15	4389	17	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGTCCTTTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	111874533	111794890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111795818_111796688_111796889_111797893_111798061_111798736_111798871_111798942_111799081_111799561_111800329_111801235_111801738_111802046_111802211_111805034_111805216_111807390_111807532_111809978_111810176_111811255_111811431_111812761_111812864_111824643_111824721_111832848_111832969_111838719_111838868_111874295
ENSMUSG00000021286.9_1	chr12	+	1291	7	FSM	ENSMUSG00000021286.9	ENSMUST00000021714.9	1308	7	11	6	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACACAGCAGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	111780614	111794814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111793976_111794120_111794251
ENSMUSG00000021286.9_7	chr12	+	1287	8	FSM	ENSMUSG00000021286.9	ENST00000216602.10	1307	8	12	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAGTACACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	111780666	111794808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111780812_111789675_111789727_111790188_111790358_111791286_111791363_111791450_111791543_111792012_111792067_111793976_111794120_111794251
ENSMUSG00000021287.13_0	chr12	-	2414	8	FSM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTATCAACACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111780275	111769634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494_111778654_111780258
ENSMUSG00000021287.13_1	chr12	-	2389	7	ISM	ENSMUSG00000021287.13	ENSMUST00000021715.6	2422	8	1630	8	1630	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGTATCAACACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	111778645	111769634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_111771107_111771177_111771225_111771348_111771562_111774266_111774422_111776185_111776399_111777291_111777430_111778494
ENSMUSG00000021287.13_2	chr12	-	820	4	FSM	ENSMUSG00000021287.13	ENST00000553264.5	835	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCATTAGGGGGATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	111776390	111770915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111771159_111771344_111771562_111774266_111774422_111776185
ENSMUSG00000021288.20_2	chr12	+	2486	16	FSM	ENSMUSG00000021288.20	ENSMUST00000084941.12	2504	16	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCAAGTGAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	111725293	111773202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111761981_111762113_111772441_111772509_111772748
ENSMUSG00000021288.20_21	chr12	+	2252	14	FSM	ENSMUSG00000021288.20	ENSMUST00000118471.8	2272	14	14	6	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGACCTGTGTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	111725403	111761325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111725477_111738752_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755894_111760770
ENSMUSG00000021288.20_29	chr12	+	2244	14	FSM	ENSMUSG00000021288.20	ENSMUST00000120544.9	2261	14	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAACTGACCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	111738760	111761320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111739015_111740786_111741018_111742357_111742437_111743245_111743472_111744453_111744542_111745032_111745135_111748085_111748260_111748377_111748478_111751705_111751756_111751868_111751937_111753921_111754031_111755758_111755921_111760082_111760134_111760770
ENSMUSG00000021290.7_0	chr12	-	358	4	FSM	ENSMUSG00000021290.7	ENSMUST00000021719.7	366	4	1	7	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCACTCTCTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	111933410	111927815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933357
ENSMUSG00000021290.7_1	chr12	-	301	3	ISM	ENSMUSG00000021290.7	ENSMUST00000222874.2	612	4	3545	6	3545	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCACTCTCTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	111929783	111927815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_111927973_111928866_111928891_111929663
ENSMUSG00000021290.7_3	chr12	-	603	4	FSM	ENSMUSG00000021290.7	ENSMUST00000222874.2	612	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACCACTCTCTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	111933325	111927815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111927973_111928866_111928891_111929663_111929788_111933027
ENSMUSG00000021301.10_0	chr13	-	6603	30	FSM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATATTAAAATAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	14697484	14403780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14486273_14486376_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018_14609077_14696015_14696244_14697408
ENSMUSG00000021301.10_1	chr13	-	6529	29	ISM	ENSMUSG00000021301.10	ENST00000395891.7	6620	30	1244	12	1244	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACATATTAAAATAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	14696245	14403780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14486273_14486376_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018_14609077_14696015
ENSMUSG00000021301.10_33	chr13	-	4841	27	FSM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCAAAGCAAATTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	14609077	14405137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242_14552568_14609018
ENSMUSG00000021301.10_34	chr13	-	4778	26	ISM	ENSMUSG00000021301.10	ENST00000453890.5	4850	27	56515	8	56515	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTCAAAGCAAATTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	14552563	14405137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_14405346_14408883_14409083_14411475_14411591_14420313_14420461_14422143_14422274_14422928_14423028_14438649_14438803_14439697_14439812_14440542_14440664_14445543_14445654_14446591_14446676_14452862_14452960_14455000_14455107_14460132_14460268_14471854_14472041_14474910_14475033_14480560_14480704_14481367_14481519_14490601_14491946_14493458_14493560_14497062_14497206_14515329_14515500_14520604_14520681_14531717_14531813_14546539_14546648_14552242
ENSMUSG00000021302.11_0	chr13	-	4221	4	FSM	ENSMUSG00000021302.11	ENSMUST00000170957.3	4244	4	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATATAAATTTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	14238061	14225254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14229041_14229734_14229806_14232380_14232474_14237790
ENSMUSG00000021302.11_1	chr13	-	645	4	FSM	ENSMUSG00000021302.11	ENSMUST00000221713.2	667	4	20	2	20	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCATCAGGGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	14237983	14228820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14229041_14232380_14232474_14233903_14234043_14237790
ENSMUSG00000021303.15_0	chr13	+	3170	4	FSM	ENSMUSG00000021303.15	ENSMUST00000021734.9	3179	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCAACTGTGGATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13958913	14002472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_13959229_13978183_13978288_13980645_13980756_13999831
ENSMUSG00000021306.12_0	chr13	-	2956	7	FSM	ENSMUSG00000021306.12	ENSMUST00000021738.10	2971	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTGTCAACTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	13568187	13532207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_13534009_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021306.12_5	chr13	-	3626	7	FSM	ENSMUSG00000021306.12	ENSMUST00000220628.2	3634	7	8	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	13568201	13533200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_13535658_13535882_13536008_13538028_13538158_13539630_13539781_13542173_13542397_13548943_13548994_13567709
ENSMUSG00000021311.10_16	chr13	-	3221	28	FSM	ENSMUSG00000021311.10	ENST00000681177.1	3238	28	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGTAAGTATGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	12268848	12202931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649
ENSMUSG00000021311.10_19	chr13	-	3478	30	FSM	ENSMUSG00000021311.10	ENST00000681102.1	3496	30	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGGTAAGTATGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	12268848	12202932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12203040_12204232_12204426_12205089_12205291_12208499_12208697_12210123_12210280_12212798_12212875_12213931_12214031_12215082_12215165_12219628_12219750_12220175_12220244_12227273_12227375_12227556_12227665_12230298_12230452_12231695_12231786_12236307_12236449_12237040_12237158_12242569_12242756_12245830_12245972_12247787_12247901_12250342_12250423_12252866_12252935_12254534_12254597_12256450_12256552_12258820_12258916_12259440_12259504_12262204_12262312_12262778_12262872_12264730_12264801_12265487_12265578_12268649
ENSMUSG00000021318.16_0	chr13	+	8140	15	FSM	ENSMUSG00000021318.16	ENSMUST00000110510.4	8170	15	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATATTCTACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	15638587	15904604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_15638697_15652584_15652750_15722984_15723228_15788363_15788470_15815653_15815860_15818878_15819026_15823105_15823308_15834546_15834761_15835465_15835580_15836974_15837116_15888083_15888234_15889534_15889700_15894639_15894931_15898024_15898353_15899045
ENSMUSG00000021318.16_2	chr13	+	381	2	FSM	ENSMUSG00000021318.16	ENST00000642432.1	397	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTAAGTACTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	15721389	15723221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_15721534_15722984
ENSMUSG00000021319.8_0	chr13	+	1744	6	FSM	ENSMUSG00000021319.8	ENSMUST00000002883.7	1764	6	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAAGATCTTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	19807352	19816987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_19808048_19809197_19809279_19809363_19809430_19811275_19811475_19814235_19814300_19816348
ENSMUSG00000021322.9_0	chr13	+	1619	20	FSM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCGCGGAAGGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21024265	21207506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21024333_21035248_21035349_21084639_21084700_21089830_21089902_21094234_21094296_21095286_21095358_21096099_21096149_21099121_21099171_21101229_21101325_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21205182_21205298_21207378
ENSMUSG00000021322.9_8	chr13	+	1551	19	ISM	ENSMUSG00000021322.9	ENST00000617267.4	1626	20	10985	6	10985	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCGCGGAAGGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21035249	21207506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_21035349_21084639_21084700_21089830_21089902_21094234_21094296_21095286_21095358_21096099_21096149_21099121_21099171_21101229_21101325_21125983_21126076_21163633_21163717_21178800_21178838_21179589_21179665_21184067_21184241_21186824_21186884_21187066_21187127_21189200_21189298_21197281_21197359_21205182_21205298_21207378
ENSMUSG00000021326.14_0	chr13	+	4304	9	FSM	ENSMUSG00000021326.14	ENSMUST00000222544.2	4312	9	7	1	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTGTTATTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21363621	21378893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21363727_21364105_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_10	chr13	+	2032	8	FSM	ENSMUSG00000021326.14	ENSMUST00000223065.2	2046	8	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACGTTTTGTTTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	21364407	21377033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374266_21374295_21375389_21375417_21376199
ENSMUSG00000021326.14_5	chr13	+	4192	8	FSM	ENSMUSG00000021326.14	ENSMUST00000021761.13	4204	8	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTGTTATTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	21364112	21378893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21365085_21366153_21366250_21367901_21368133_21372210_21372234_21374024_21374141_21374261_21374295_21375389_21375417_21376199
ENSMUSG00000021327.20_2	chr13	-	2591	6	FSM	ENSMUSG00000021327.20	ENSMUST00000116434.11	2600	6	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCCTGTTGGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	21586922	21571178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21572877_21578131_21578256_21578686_21578752_21578928_21579077_21580269_21580745_21586841
ENSMUSG00000021327.20_7	chr13	-	2059	5	FSM	ENSMUSG00000021327.20	ENST00000377255.3	2081	5	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTAAAAACCCATTATC	NA	NA	NA	NA	NA	NA	NA	NA	21580677	21571574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21572872_21578118_21578256_21578686_21578752_21578924_21579077_21580269
ENSMUSG00000021338.18_1	chr13	-	4970	38	FSM	ENSMUSG00000021338.18	ENSMUST00000072889.12	4988	38	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTCTGCTTATTAG	NA	NA	NA	NA	NA	NA	NA	NA	24464762	24196643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_24197444_24206478_24206620_24208305_24208519_24209836_24209919_24220167_24220592_24225655_24225769_24228156_24228354_24228998_24229066_24248559_24248710_24251114_24251203_24253613_24253790_24257922_24258055_24259594_24259724_24265911_24266011_24272960_24273055_24276488_24276558_24278380_24278554_24282788_24282844_24282943_24283044_24283564_24283647_24286054_24286067_24290291_24290362_24292472_24292578_24295792_24295870_24295996_24296075_24299457_24299562_24305821_24305909_24321119_24321215_24323271_24323361_24325638_24325715_24338660_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24464543
ENSMUSG00000021338.18_4	chr13	-	720	8	FSM	ENSMUSG00000021338.18	ENST00000461945.1	739	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGGTAAGCCCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	24465265	24338667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_24338735_24338966_24339038_24339372_24339471_24348783_24348906_24357598_24357659_24362189_24362241_24460439_24460538_24465112
ENSMUSG00000021339.5_0	chr13	-	7016	11	FSM	ENSMUSG00000021339.5	ENSMUST00000021772.4	7035	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAGCAGTCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	25204351	25171473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25188925_25189039_25190421_25190459_25202502_25202577_25204064
ENSMUSG00000021339.5_4	chr13	-	1208	8	FSM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGCTTTTTAAAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	25202575	25176843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609_25185784_25202502
ENSMUSG00000021339.5_5	chr13	-	1135	7	ISM	ENSMUSG00000021339.5	ENST00000274747.11	1214	8	16796	2	16796	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGCTTTTTAAAGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	25185783	25176843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_25177172_25177652_25177767_25178707_25178826_25179327_25179481_25181010_25181128_25182907_25183039_25185609
ENSMUSG00000021357.15_0	chr13	-	4256	28	FSM	ENSMUSG00000021357.15	ENSMUST00000021785.8	4256	28	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31158037	30997901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31157978
ENSMUSG00000021357.15_1	chr13	-	4364	29	FSM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31134270	30997901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592_31124754_31130347_31130407_31134162
ENSMUSG00000021357.15_4	chr13	-	4188	27	ISM	ENSMUSG00000021357.15	ENSMUST00000102946.8	4375	29	9537	0	9537	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGTGTTTGTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31124744	30997901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_30999375_31001980_31002041_31004560_31004623_31006614_31006738_31010021_31010078_31040636_31040779_31048813_31048931_31051954_31052022_31055101_31055164_31055824_31055885_31056271_31056353_31059241_31059304_31060713_31060836_31061225_31061384_31061530_31061597_31066231_31066357_31070171_31070298_31084767_31084887_31089635_31089739_31090485_31090568_31090714_31090861_31095152_31095234_31109705_31109831_31111290_31111405_31119477_31119605_31122098_31122276_31124592
ENSMUSG00000021360.17_0	chr13	+	4340	3	FSM	ENSMUSG00000021360.17	ENSMUST00000110191.10	4352	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCAGGAATAGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	41013239	41114361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41014750_41107051_41107148_41111627
ENSMUSG00000021360.17_1	chr13	+	3887	3	FSM	ENSMUSG00000021360.17	ENSMUST00000069958.15	3929	3	36	6	36	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCAGGAATAGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	41040704	41114361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41041762_41107051_41107148_41111627
ENSMUSG00000021360.17_2	chr13	+	4012	3	FSM	ENSMUSG00000021360.17	ENSMUST00000067778.8	4038	3	19	7	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCAGGAATAGTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	41071095	41114361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41072278_41107051_41107148_41111627
ENSMUSG00000021361.8_0	chr13	+	897	6	FSM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTCTCTGGTGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	41169776	41176054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41169875_41170590_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUSG00000021361.8_6	chr13	+	800	5	ISM	ENSMUSG00000021361.8	ENSMUST00000021790.7	914	6	822	8	822	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTCTCTGGTGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	41170589	41176054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_41170650_41171181_41171259_41171831_41171934_41174594_41174683_41175581
ENSMUSG00000021363.15_0	chr13	-	2161	13	FSM	ENSMUSG00000021363.15	ENST00000313243.6	2182	13	16	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCACAAGACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	41223926	41179798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41180039_41183492_41183613_41188229_41188362_41193104_41193254_41195494_41195662_41199497_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_1	chr13	-	2049	12	FSM	ENSMUSG00000021363.15	ENST00000536370.6	2064	12	10	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCACAAGACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	41223934	41179798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41180039_41188229_41188362_41193104_41193254_41195494_41195662_41199497_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_10	chr13	-	2239	14	ISM	ENSMUSG00000021363.15	ENST00000354489.7	2293	15	9185	5	6	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCACAAGACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	41223929	41179798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_41180039_41183492_41183613_41186000_41186076_41188229_41188362_41193104_41193254_41195494_41195662_41199497_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612
ENSMUSG00000021363.15_4	chr13	-	2205	14	FSM	ENSMUSG00000021363.15	ENST00000474039.5	2210	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCACAAGACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	41233106	41179798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41180039_41183492_41183613_41188229_41188362_41193104_41193254_41195494_41195662_41199497_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41233077
ENSMUSG00000021363.15_9	chr13	-	2288	15	FSM	ENSMUSG00000021363.15	ENST00000354489.7	2293	15	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCCACAAGACGCACACA	NA	NA	NA	NA	NA	NA	NA	NA	41233114	41179798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41180039_41183492_41183613_41186000_41186076_41188229_41188362_41193104_41193254_41195494_41195662_41199497_41199807_41201528_41201697_41202783_41202956_41204845_41204979_41206770_41206851_41209169_41209292_41210078_41210134_41223612_41223942_41233077
ENSMUSG00000021365.16_0	chr13	-	4850	8	FSM	ENSMUSG00000021365.16	ENSMUST00000021794.14	4871	8	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACAGTTTCTATTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	41640752	41463060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41465647_41467841_41467932_41469249_41470492_41471337_41471440_41471919_41472022_41492052_41492497_41579336_41579501_41640632
ENSMUSG00000021365.16_3	chr13	-	4611	7	FSM	ENSMUSG00000021365.16	ENSMUST00000163623.3	4626	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTATAAAAAGTGAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	41512711	41463398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41465647_41467841_41467932_41469249_41470492_41471337_41471440_41471919_41472022_41492052_41492497_41512328
ENSMUSG00000021366.9_0	chr13	+	8536	7	FSM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGCTTACGTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	42276633	42338505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_42276690_42307855_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021366.9_7	chr13	+	8475	6	ISM	ENSMUSG00000021366.9	ENST00000541134.5	8536	7	31227	0	31227	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGCTTACGTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	42307860	42338505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_42313795_42316826_42316965_42317699_42317869_42321037_42321140_42334907_42335402_42336867
ENSMUSG00000021367.9_0	chr13	+	2120	5	FSM	ENSMUSG00000021367.9	ENSMUST00000021796.9	2139	5	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTACTGACTTGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	42454964	42461460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_42455435_42457032_42457202_42458421_42458581_42458730_42458845_42460252
ENSMUSG00000021368.16_0	chr13	-	1222	8	FSM	ENSMUSG00000021368.16	ENSMUST00000179852.9	1246	8	10	14	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAATCAAAATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43324950	43305229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324784
ENSMUSG00000021368.16_1	chr13	-	1223	8	FSM	ENSMUSG00000021368.16	ENSMUST00000021797.9	1239	8	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAATCAAAATGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43324970	43305228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43305457_43306545_43306676_43308164_43308311_43312738_43312877_43318754_43318943_43322249_43322331_43323277_43323424_43324804
ENSMUSG00000021371.6_0	chr13	-	4326	9	FSM	ENSMUSG00000021371.6	ENSMUST00000021800.6	4339	9	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTGTGTACAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43713626	43691870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43695206_43697931_43698047_43699163_43699218_43702126_43702199_43703007_43703050_43704472_43704575_43705072_43705177_43708371_43708492_43713244
ENSMUSG00000021373.17_0	chr13	+	3678	13	FSM	ENSMUSG00000021373.17	ENSMUST00000021802.16	3713	13	15	20	15	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAATAAAACTAGA	NA	NA	NA	NA	NA	NA	NA	NA	46655338	46803737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_46655688_46678890_46679013_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ENSMUSG00000021373.17_1	chr13	+	1611	12	FSM	ENSMUSG00000021373.17	ENSMUST00000225824.2	1634	12	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATATTTAACATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	46655664	46802002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_46655804_46684452_46684554_46713979_46714058_46763071_46763216_46763539_46763626_46768725_46768832_46789096_46789287_46791324_46791498_46793298_46793423_46793515_46793599_46800001_46800143_46801756
ENSMUSG00000021374.11_0	chr13	-	6095	22	FSM	ENSMUSG00000021374.11	ENSMUST00000021803.10	6109	22	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACGTACAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46881410	46833388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_46834719_46834999_46835169_46836472_46836746_46837358_46837713_46840098_46840975_46842534_46842727_46846987_46847594_46850121_46850245_46853124_46853210_46854464_46854564_46855079_46855215_46858115_46858243_46858644_46858692_46861222_46861370_46863104_46863159_46863241_46863287_46863387_46863505_46866108_46866238_46866316_46866457_46867096_46867346_46870576_46870800_46880835
ENSMUSG00000021375.12_0	chr13	-	6850	38	FSM	ENSMUSG00000021375.12	ENSMUST00000056978.8	6866	38	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCAAAGTGTTGATCG	NA	NA	NA	NA	NA	NA	NA	NA	47083188	46902572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_46904103_46905556_46906349_46914748_46914901_46916823_46916930_46918075_46918124_46922629_46922708_46924692_46924846_46924981_46925075_46926246_46926424_46927059_46927185_46928878_46928935_46930562_46930690_46932369_46932470_46938721_46938869_46939988_46940122_46941533_46941686_46944809_46944984_46947366_46947529_46951817_46951968_46952668_46952810_46954756_46954920_46955991_46956206_46962366_46962534_46962633_46962721_46964166_46964298_46966204_46966340_46967635_46967747_46968685_46968899_46969762_46969875_46977424_46977538_46978681_46978817_46980168_46980257_46984269_46984451_46986199_46986293_47001801_47001863_47018294_47018308_47082691_47082783_47083042
ENSMUSG00000021375.12_2	chr13	-	321	3	FSM	ENSMUSG00000021375.12	ENST00000502704.2	336	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGGATTGCTGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	47083240	47068684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_47068717_47082691_47082783_47083042
ENSMUSG00000021375.12_5	chr13	-	291	2	ISM	ENSMUSG00000021375.12	ENST00000502704.2	336	3	5	14015	5	-14015	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAATCCCATCCCGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	47083242	47082691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_47082783_47083042
ENSMUSG00000021376.12_0	chr13	-	2691	9	FSM	ENSMUSG00000021376.12	ENSMUST00000021806.11	2708	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATTTTTCCTGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47196677	47177026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_47178954_47180727_47180773_47182357_47182444_47185893_47185969_47188496_47188550_47189370_47189504_47193579_47193673_47194874_47195056_47196579
ENSMUSG00000021377.16_0	chr13	-	2543	11	FSM	ENSMUSG00000021377.16	ENSMUST00000021807.13	2556	11	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCTTGTATTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	47259656	47238260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_47239556_47239900_47239970_47241500_47241650_47241952_47242092_47251630_47251820_47252818_47252940_47253649_47253745_47255098_47255209_47255448_47255551_47259047_47259214_47259548
ENSMUSG00000021384.15_0	chr13	-	443	4	FSM	ENSMUSG00000021384.15	ENST00000375469.5	456	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACGTAGGTTACCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	49394119	49390904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49390935_49390984_49391089_49392264_49392413_49393958
ENSMUSG00000021384.15_3	chr13	-	414	3	ISM	ENSMUSG00000021384.15	ENST00000375469.5	456	4	7	85	7	-85	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCAATGGTGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	49394120	49390984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_49391089_49392264_49392413_49393958
ENSMUSG00000021385.11_0	chr13	+	4403	13	FSM	ENSMUSG00000021385.11	ENSMUST00000220447.2	4421	13	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTGCACTTTATGACA	NA	NA	NA	NA	NA	NA	NA	NA	49574733	49618040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49574943_49584344_49584393_49585845_49585942_49587304_49587372_49588945_49589068_49590186_49590277_49595428_49595488_49596897_49596971_49599778_49600053_49602712_49602864_49603456_49603560_49612088_49612169_49615009
ENSMUSG00000021388.15_0	chr13	+	2322	8	FSM	ENSMUSG00000021388.15	ENSMUST00000177948.2	2329	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAATGTGTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	49697925	49721033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49698194_49705133_49705393_49707395_49707509_49710722_49710937_49712266_49712378_49716916_49717011_49717231_49717371_49719909
ENSMUSG00000021388.15_1	chr13	+	2294	8	FSM	ENSMUSG00000021388.15	ENSMUST00000021820.14	2310	8	8	8	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAAATGTGTGCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	49697970	49721033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49698194_49705116_49705393_49707395_49707509_49710722_49710937_49712266_49712378_49716916_49717011_49717231_49717371_49719909
ENSMUSG00000021390.7_0	chr13	+	2554	7	FSM	ENSMUSG00000021390.7	ENSMUST00000021822.7	2566	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGACAATGTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	49761525	49777969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49761603_49762589_49762834_49764775_49764870_49769030_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_12	chr13	+	2478	6	ISM	ENSMUSG00000021390.7	ENSMUST00000021822.7	2566	7	1067	8	1047	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGGACAATGTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	49762588	49777969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_49762834_49764775_49764870_49769030_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021390.7_7	chr13	+	1683	7	FSM	ENSMUSG00000021390.7	ENST00000262551.8	1698	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAAGTGCTCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	49761551	49776850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49761679_49762391_49762834_49764775_49764870_49769030_49769190_49771568_49771772_49774488_49774585_49776288
ENSMUSG00000021391.11_0	chr13	-	1123	8	FSM	ENSMUSG00000021391.11	ENSMUST00000021818.9	1144	8	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTAATAGTATAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	49806249	49617507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49617814_49618170_49618263_49619154_49619235_49780730_49780828_49794701_49794791_49801041_49801131_49803596_49803776_49806058
ENSMUSG00000021392.9_0	chr13	+	4353	17	FSM	ENSMUSG00000021392.9	ENSMUST00000222197.2	4368	17	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCCCACCTCAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	49806560	49832206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ENSMUSG00000021392.9_10	chr13	+	4236	18	FSM	ENSMUSG00000021392.9	ENSMUST00000021824.8	4242	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCATTTTGTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	49806825	49832485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49806874_49807004_49807159_49807822_49807979_49808648_49808712_49810150_49810230_49812171_49812308_49813425_49813495_49814433_49816252_49817529_49817644_49818203_49818327_49818854_49818946_49820830_49820967_49823184_49823263_49826027_49826300_49828861_49828989_49829797_49829866_49830230_49830311_49831861
ENSMUSG00000021395.12_0	chr13	+	4419	6	FSM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAACTTGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	51254924	51306576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_51255027_51277123_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021395.12_1	chr13	+	4321	5	ISM	ENSMUSG00000021395.12	ENSMUST00000095797.6	4434	6	22204	6	22204	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCAACTTGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	51277119	51306576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_51277325_51281960_51282010_51293392_51293647_51298337_51298572_51302997
ENSMUSG00000021400.9_0	chr13	+	2612	7	FSM	ENSMUSG00000021400.9	ENSMUST00000021832.7	2633	7	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACTCTTCAGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32986035	33006586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_32987028_32989320_32989513_32990741_32990984_33000235_33000466_33004201_33004358_33005021_33005102_33005866
ENSMUSG00000021403.4_0	chr13	+	3238	7	FSM	ENSMUSG00000021403.4	ENSMUST00000006392.3	3253	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTATAGAAGCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	33211407	33225861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33211584_33213434_33213613_33216898_33217037_33217509_33217628_33219498_33219642_33221954_33222111_33223532
ENSMUSG00000021408.16_0	chr13	+	3237	11	FSM	ENSMUSG00000021408.16	ENSMUST00000021844.15	3266	11	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTCCAGTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34186369	34217655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34186690_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ENSMUSG00000021408.16_1	chr13	+	6466	11	FSM	ENSMUSG00000021408.16	ENSMUST00000167374.9	6472	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACCTAAAGGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34186858	34221126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34186937_34193583_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ENSMUSG00000021408.16_2	chr13	+	6386	10	ISM	ENSMUSG00000021408.16	ENSMUST00000167374.9	6472	11	6729	4	6729	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACCTAAAGGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34193585	34221126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_34193804_34194527_34194685_34197232_34197371_34199108_34199341_34200979_34201130_34205363_34205441_34210724_34210816_34211700_34212235_34214022_34214164_34216478
ENSMUSG00000021411.17_0	chr13	-	2666	5	FSM	ENSMUSG00000021411.17	ENSMUST00000053459.15	2684	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGAGAGGATGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34837458	34811823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34812872_34814333_34814446_34822147_34822266_34822989_34823082_34836162
ENSMUSG00000021413.10_0	chr13	+	7827	15	FSM	ENSMUSG00000021413.10	ENSMUST00000077853.5	7844	15	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATACCGTCTACTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	35059297	35090043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_35059678_35067213_35068411_35070652_35070827_35072106_35072263_35073494_35073577_35074477_35074689_35076072_35076147_35077743_35077835_35078417_35078566_35079301_35079440_35079949_35080104_35083091_35083207_35083813_35083966_35084346_35084434_35085375
ENSMUSG00000021417.16_0	chr13	-	1725	10	FSM	ENSMUSG00000021417.16	ENSMUST00000021854.14	1746	10	13	8	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAGCCTTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35178251	35161739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177812
ENSMUSG00000021417.16_1	chr13	-	1406	10	FSM	ENSMUSG00000021417.16	ENSMUST00000171229.8	1426	10	11	9	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAGCCTTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35178116	35161739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177214_35177996
ENSMUSG00000021417.16_2	chr13	-	1392	10	FSM	ENSMUSG00000021417.16	ENSMUST00000110251.9	1395	10	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAAGCCTTAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	35178112	35161739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_35162050_35162632_35162777_35164244_35164335_35170049_35170171_35171451_35171552_35172265_35172336_35174163_35174353_35174700_35174800_35177050_35177204_35177996
ENSMUSG00000021418.16_0	chr13	-	4361	8	FSM	ENSMUSG00000021418.16	ENSMUST00000171686.9	4380	8	8	11	-7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACAAAACTGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36090334	36077465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085288_36085415_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000021418.16_8	chr13	-	948	7	FSM	ENSMUSG00000021418.16	ENST00000618533.4	969	7	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCATAAAAGATGCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	36090298	36080716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_36080909_36082547_36082683_36082797_36082997_36085995_36086092_36087670_36087740_36088401_36088547_36090186
ENSMUSG00000021420.14_0	chr13	+	2108	7	FSM	ENSMUSG00000021420.14	ENSMUST00000021857.13	2125	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCATTGACATAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	36301404	36721560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_36301989_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUSG00000021420.14_1	chr13	+	949	6	FSM	ENSMUSG00000021420.14	ENSMUST00000099582.4	962	6	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	36301843	36721473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_36301989_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUSG00000021420.14_2	chr13	+	1728	8	FSM	ENSMUSG00000021420.14	ENSMUST00000224611.2	1750	8	13	9	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTGACATAGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	36301870	36721562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_36301989_36332343_36332428_36388491_36389125_36416104_36416265_36430345_36430478_36525919_36526081_36594061_36594214_36721274
ENSMUSG00000021427.11_3	chr13	-	9317	8	FSM	ENSMUSG00000021427.11	ENSMUST00000021864.8	9333	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATCTGGGCCTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	38178183	38155382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38163783_38167368_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_7	chr13	-	1093	8	NNC	ENSMUSG00000021427.11	novel	1114	8	NA	NA	8	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACAAATTTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	38178112	38163539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr13_-_38163783_38167364_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021427.11_8	chr13	-	1095	8	FSM	ENSMUSG00000021427.11	ENST00000479365.5	1114	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	6329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACAAATTTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	38178111	38163539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38163783_38167361_38167463_38169239_38169319_38169950_38170028_38171492_38171756_38173479_38173568_38175972_38176086_38177980
ENSMUSG00000021428.10_0	chr13	+	2731	17	FSM	ENSMUSG00000021428.10	ENSMUST00000021866.10	2738	17	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTGCATTCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38220977	38245409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_38221508_38224048_38224251_38227026_38227118_38227884_38227955_38229248_38229292_38231220_38231314_38232855_38232969_38233051_38233133_38234199_38234287_38234783_38234922_38236244_38236349_38236853_38236961_38240137_38240204_38241112_38241233_38242663_38242718_38243915_38244069_38244730
ENSMUSG00000021431.16_0	chr13	+	1771	9	FSM	ENSMUSG00000021431.16	ENSMUST00000091641.13	1785	9	12	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTGAAGTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38388932	38411639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_38389105_38393852_38393967_38394182_38394244_38395042_38395118_38400300_38400490_38401349_38401472_38404663_38404753_38405210_38405370_38410849
ENSMUSG00000021432.16_0	chr13	-	2069	10	FSM	ENSMUSG00000021432.16	ENSMUST00000021870.12	2090	10	10	11	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGAAAATCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	39144841	39116122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144588
ENSMUSG00000021432.16_1	chr13	-	2202	10	FSM	ENSMUSG00000021432.16	ENSMUST00000225432.2	2216	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGAAAATCAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	39144793	39116122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144407
ENSMUSG00000021432.16_3	chr13	-	1755	10	FSM	ENSMUSG00000021432.16	ENSMUST00000167513.3	1778	10	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGTTTTAATAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	39144485	39116283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_39116893_39118713_39118784_39121217_39121330_39121722_39121816_39123850_39123949_39127034_39127143_39128475_39128631_39138084_39138207_39139624_39139913_39144385
ENSMUSG00000021453.3_0	chr13	+	1057	4	FSM	ENSMUSG00000021453.3	ENSMUST00000021903.3	1071	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAAACAAACTTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	52000722	52002499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_52000869_52001387_52001490_52001591_52001806_52001904
ENSMUSG00000021453.3_4	chr13	+	909	4	FSM	ENSMUSG00000021453.3	ENST00000375769.1	914	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAAGGGGGTCTGGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	52000766	52002155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_52000904_52001182_52001490_52001591_52001806_52001904
ENSMUSG00000021457.15_0	chr13	+	5358	14	FSM	ENSMUSG00000021457.15	ENSMUST00000120135.8	5363	14	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCTTTACGGATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	52737212	52802827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_52737642_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52778743_52778813_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075_52797189_52799758
ENSMUSG00000021457.15_1	chr13	+	2504	13	FSM	ENSMUSG00000021457.15	ENSMUST00000118756.8	2519	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGAACAATCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	52737480	52797643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_52737642_52750993_52751091_52764831_52765289_52766330_52766492_52774836_52774976_52776715_52776798_52777280_52777313_52785692_52785781_52786923_52787102_52792073_52792284_52794640_52794831_52795900_52796042_52797075
ENSMUSG00000021458.18_0	chr13	+	3493	15	FSM	ENSMUSG00000021458.18	ENSMUST00000091560.11	3509	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCACTTTTATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	63162756	63447463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_63163778_63180836_63181004_63208848_63209009_63215853_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525
ENSMUSG00000021458.18_6	chr13	+	2966	16	FSM	ENSMUSG00000021458.18	ENSMUST00000021911.15	2979	16	9	4	9	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTCCAGTTTGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	63162989	63450094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_63163778_63180836_63181004_63208854_63209025_63215866_63216100_63304359_63304550_63318754_63318862_63338292_63338396_63338879_63338988_63347320_63347365_63357919_63357981_63387900_63387970_63388070_63388146_63429955_63430073_63444671_63444759_63446525_63446671_63449592
ENSMUSG00000021460.18_0	chr13	-	1135	9	FSM	ENSMUSG00000021460.18	ENST00000303617.5	1149	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATTATGTACATGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	53083571	52989126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_1	chr13	-	1056	8	ISM	ENSMUSG00000021460.18	ENST00000303617.5	1149	9	10273	8	10273	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATTATGTACATGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	53073304	52989126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53073036_53073125_53073234
ENSMUSG00000021460.18_2	chr13	-	1294	10	FSM	ENSMUSG00000021460.18	ENSMUST00000021913.16	1320	10	16	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCCAAAAATGTGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	53083681	52989164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_52989588_52992121_52992170_52993593_52993645_52994912_52995101_53041276_53041334_53043138_53043232_53052685_53052773_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_6	chr13	-	2614	4	FSM	ENSMUSG00000021460.18	ENSMUST00000119311.8	2627	4	13	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGGCTGCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53083677	53061080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_53063352_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021460.18_7	chr13	-	3218	4	FSM	ENSMUSG00000021460.18	ENSMUST00000110031.4	3235	4	14	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATCTCTTGGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	53083703	53064248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_53067098_53073036_53073125_53073234_53073303_53083490
ENSMUSG00000021461.18_0	chr13	-	1998	14	NNC	ENSMUSG00000021461.18	novel	2006	14	NA	NA	7	-4	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGTACAAGAAAAGCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	63579531	63432860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr13_-_63433335_63469791_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUSG00000021461.18_1	chr13	-	3083	15	FSM	ENSMUSG00000021461.18	ENSMUST00000161977.8	3111	15	23	5	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAGACAAAGTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	63579515	63459357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_63460618_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUSG00000021461.18_2	chr13	-	2976	16	FSM	ENSMUSG00000021461.18	ENSMUST00000163091.8	2995	16	10	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATTTTATATTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	63579529	63459577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_63460618_63464997_63465097_63465166_63465371_63469680_63469859_63471221_63471304_63473364_63473441_63478334_63478435_63479654_63479708_63488132_63488290_63495233_63495399_63508009_63508075_63509392_63509507_63545896_63545992_63548047_63548133_63550655_63550853_63579263
ENSMUSG00000021466.13_0	chr13	-	1233	5	FSM	ENSMUSG00000021466.13	ENST00000468211.6	1251	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCCATGCGCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63721489	63692745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_63692942_63693050_63693121_63695809_63696000_63711436_63711630_63720905
ENSMUSG00000021468.9_0	chr13	-	2595	15	FSM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	53531426	53486787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997_53528106_53531328
ENSMUSG00000021468.9_1	chr13	-	2499	14	ISM	ENSMUSG00000021468.9	ENSMUST00000021920.8	2606	15	3326	4	3326	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAGTCTGTTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	53528107	53486787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_53488014_53489376_53489451_53491643_53491762_53496207_53496263_53497163_53497261_53497814_53497911_53498836_53498945_53505636_53505727_53508186_53508317_53512796_53512930_53521347_53521421_53521901_53521996_53527364_53527460_53527997
ENSMUSG00000021469.10_0	chr13	-	2437	2	FSM	ENSMUSG00000021469.10	ENSMUST00000021922.10	2453	2	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAGTAAAGTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	53627099	53620924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_53622630_53626367
ENSMUSG00000021470.20_0	chr13	+	2730	14	FSM	ENSMUSG00000021470.20	ENSMUST00000067821.13	2743	14	4	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAATATTTCAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	63963120	64017460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839
ENSMUSG00000021470.20_11	chr13	+	4551	18	ISM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	4165	11	4165	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGAGTAGGACATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	63967453	64047306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ENSMUSG00000021470.20_3	chr13	+	4605	19	FSM	ENSMUSG00000021470.20	ENSMUST00000238465.2	4614	19	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGTAGGACATGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	63963288	64047308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_63963332_63967444_63967870_63972622_63972743_63982409_63982604_63989237_63989400_63989775_63989984_63992359_63992501_63995154_63995269_63996554_63996675_64000764_64000837_64001441_64001588_64006044_64006141_64013771_64013872_64016839_64016993_64018502_64018584_64019609_64020742_64025192_64025348_64042451_64042634_64046347
ENSMUSG00000021474.10_0	chr13	+	2766	11	FSM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGCAGAATGAAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	54225889	54262346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54225952_54239467_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021474.10_2	chr13	+	2703	10	ISM	ENSMUSG00000021474.10	ENSMUST00000021930.10	2783	11	13586	10	13586	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGAAAACAAACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54239473	54262351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_54239643_54242907_54243079_54245241_54245341_54246391_54246468_54247019_54247106_54247872_54248001_54250749_54250800_54258820_54258871_54259766_54259815_54260525
ENSMUSG00000021476.10_0	chr13	+	2541	8	FSM	ENSMUSG00000021476.10	ENSMUST00000021929.10	2564	8	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTATGACTGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	64309696	64334342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64310149_64317827_64317991_64321876_64322036_64322603_64322673_64323818_64323903_64329920_64330093_64332386_64332573_64333086
ENSMUSG00000021476.10_2	chr13	+	1240	6	FSM	ENSMUSG00000021476.10	ENST00000375251.7	1257	6	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATCCTCAGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64309737	64333726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64310149_64317827_64317991_64329920_64330093_64332386_64332573_64333086_64333337_64333668
ENSMUSG00000021477.10_0	chr13	-	6160	9	FSM	ENSMUSG00000021477.10	ENSMUST00000222517.2	6168	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTGTGTGTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	64518696	64507150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049_64518335_64518598
ENSMUSG00000021477.10_1	chr13	-	1963	8	FSM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCAGTCTCAAGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	64518118	64511033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841_64516979_64518049
ENSMUSG00000021477.10_29	chr13	-	1890	7	ISM	ENSMUSG00000021477.10	ENSMUST00000021933.8	1971	8	1146	6	1146	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCAGTCTCAAGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	64516974	64511033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_64512015_64513018_64513137_64514292_64514456_64514681_64514907_64515673_64515821_64515929_64516053_64516841
ENSMUSG00000021481.12_0	chr13	+	3317	7	FSM	ENSMUSG00000021481.12	ENSMUST00000021937.12	3333	7	8	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGTGTCATCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	55253147	55282630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55253332_55260848_55260953_55261490_55261584_55263292_55263438_55270142_55270329_55278346_55278441_55280119
ENSMUSG00000021481.12_2	chr13	+	500	3	FSM	ENSMUSG00000021481.12	ENST00000506693.5	516	3	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGTGAGTAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	55253151	55278432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55253332_55270094_55270329_55278346
ENSMUSG00000021481.12_3	chr13	+	261	2	FSM	ENSMUSG00000021481.12	ENST00000512315.5	282	2	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAACCAGTGAGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55253154	55278430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55253332_55278346
ENSMUSG00000021482.11_0	chr13	-	3000	6	FSM	ENSMUSG00000021482.11	ENSMUST00000222570.2	3011	6	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTTTGTTCTGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	64460513	64437610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64440043_64445068_64445201_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021482.11_5	chr13	-	2842	5	FSM	ENSMUSG00000021482.11	ENSMUST00000220895.2	2858	5	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATTTAAAATTAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	64460519	64437642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64440043_64456635_64456742_64456906_64456961_64460080_64460150_64460306
ENSMUSG00000021483.9_0	chr13	+	4102	8	FSM	ENSMUSG00000021483.9	ENSMUST00000021939.8	4118	8	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATATTTCTTTGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	64580136	64589580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64584579_64584643_64585202_64585327_64585690_64585847_64586594
ENSMUSG00000021483.9_17	chr13	+	777	5	ISM	ENSMUSG00000021483.9	ENST00000375871.8	856	6	382	3	382	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGGTCCAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	64580791	64586791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_64580905_64583931_64584121_64584306_64584429_64585690_64585847_64586594
ENSMUSG00000021483.9_18	chr13	+	902	6	ISM	ENSMUSG00000021483.9	ENST00000375883.7	980	7	381	3	381	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGGTCCAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	64580790	64586791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_64580905_64583931_64584121_64584306_64584429_64585202_64585327_64585690_64585847_64586594
ENSMUSG00000021483.9_5	chr13	+	850	6	FSM	ENSMUSG00000021483.9	ENST00000375871.8	856	6	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGGTCCAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	64580412	64586791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64585690_64585847_64586594
ENSMUSG00000021483.9_8	chr13	+	973	7	FSM	ENSMUSG00000021483.9	ENST00000375883.7	980	7	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGGTCCAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	64580413	64586791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64580485_64580790_64580905_64583931_64584121_64584306_64584429_64585202_64585327_64585690_64585847_64586594
ENSMUSG00000021484.9_0	chr13	-	4298	8	FSM	ENSMUSG00000021484.9	ENSMUST00000021940.8	4315	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTAGTGTGAGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55510585	55491651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55494851_55496127_55496248_55498968_55499084_55499192_55499355_55499523_55499604_55500758_55500877_55509933_55510053_55510200
ENSMUSG00000021485.15_1	chr13	-	1316	6	FSM	ENSMUSG00000021485.15	ENSMUST00000021941.8	1327	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGTACAGTCTATCACC	NA	NA	NA	NA	NA	NA	NA	NA	55477560	55472980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55473712_55473825_55474010_55476182_55476298_55476426_55476457_55477081_55477188_55477410
ENSMUSG00000021486.8_15	chr13	+	739	5	FSM	ENSMUSG00000021486.8	ENST00000503216.5	752	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTATAACTCGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	55469873	55472774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472675
ENSMUSG00000021486.8_9	chr13	+	2627	5	FSM	ENSMUSG00000021486.8	ENSMUST00000021942.8	2644	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	8049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGTTCTGGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55468322	55473078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55470095_55470665_55470892_55472143_55472258_55472339_55472419_55472642
ENSMUSG00000021488.9_0	chr13	+	9894	21	FSM	ENSMUSG00000021488.9	ENSMUST00000224973.2	9905	21	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTATTTATCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	55357598	55463561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55357689_55361016_55361964_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ENSMUSG00000021488.9_1	chr13	+	12772	23	FSM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTATGGCCCTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55357599	55466131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55357689_55361016_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ENSMUSG00000021488.9_12	chr13	+	1132	6	FSM	ENSMUSG00000021488.9	ENSMUST00000224156.2	1149	6	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAACTTGTCATTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55358554	55388649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55358879_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
ENSMUSG00000021488.9_13	chr13	+	972	6	FSM	ENSMUSG00000021488.9	ENSMUST00000224918.2	1001	6	21	8	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTCATTTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55359652	55388652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55359814_55361016_55361131_55361873_55361964_55381707_55381844_55386502_55386676_55388354
ENSMUSG00000021488.9_15	chr13	+	12685	22	ISM	ENSMUSG00000021488.9	ENSMUST00000099490.3	12784	23	3420	7	1127	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTATGGCCCTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	55361014	55466131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_55361964_55381707_55381844_55386502_55386676_55393330_55395891_55408156_55408282_55409356_55409628_55411145_55411256_55416260_55416337_55424335_55424455_55425344_55425489_55430471_55430596_55437867_55438069_55438943_55439124_55441370_55441528_55443799_55444006_55446376_55446490_55447503_55447774_55449539_55449657_55450651_55450794_55454748_55454856_55458149_55458355_55459931
ENSMUSG00000021493.16_0	chr13	-	1687	13	FSM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	5	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGCTCTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	55661254	55646233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUSG00000021493.16_10	chr13	-	1004	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55661249	55654585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUSG00000021493.16_11	chr13	-	932	7	ISM	ENSMUSG00000021493.16	ENSMUST00000069968.13	1006	8	1022	0	1018	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGCCTCTGTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55660229	55654585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55654937_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124
ENSMUSG00000021493.16_13	chr13	-	896	8	FSM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55661244	55654586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656592_55656624_55656704_55656857_55660124_55660232_55661179
ENSMUSG00000021493.16_14	chr13	-	824	7	ISM	ENSMUSG00000021493.16	ENSMUST00000069929.13	899	8	1023	0	1023	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTTGCCTCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	55660224	55654586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55654937_55655142_55655180_55655300_55655438_55655676_55655694_55656592_55656624_55656704_55656857_55660124
ENSMUSG00000021493.16_2	chr13	-	1611	12	ISM	ENSMUSG00000021493.16	ENSMUST00000046246.13	1697	13	1029	5	1017	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGCTCTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	55660230	55646233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55646548_55646706_55646823_55646913_55647035_55652470_55652652_55653746_55653982_55654118_55654181_55655142_55655180_55655300_55655438_55656020_55656140_55656592_55656624_55656704_55656857_55660124
ENSMUSG00000021494.10_0	chr13	-	2187	17	FSM	ENSMUSG00000021494.10	ENSMUST00000224765.2	2199	17	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTCTTCCTCTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	55684460	55678229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55678545_55678993_55679105_55679190_55679263_55679347_55679498_55679644_55679742_55679850_55679923_55680160_55680293_55680811_55680975_55681764_55681902_55681975_55682130_55682228_55682302_55683101_55683239_55683371_55683433_55683542_55683618_55683698_55683859_55684108_55684220_55684293
ENSMUSG00000021495.11_0	chr13	-	2934	9	FSM	ENSMUSG00000021495.11	ENST00000514747.6	2949	9	8	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGAGTTAGTATGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55718907	55687135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55687526_55689436_55689535_55690394_55690471_55690596_55691603_55698036_55698218_55700774_55701163_55702029_55702262_55703795_55704039_55718587
ENSMUSG00000021496.13_0	chr13	+	533	4	FSM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAAGCCTGAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55875186	55924636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55875288_55880748_55880881_55923179_55923261_55924417
ENSMUSG00000021496.13_1	chr13	+	431	3	ISM	ENSMUSG00000021496.13	ENSMUST00000021958.6	544	4	5567	7	5567	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGCCAAGCCTGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55880747	55924634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_55880881_55923179_55923261_55924417
ENSMUSG00000021497.11_0	chr13	+	1506	5	FSM	ENSMUSG00000021497.11	ENSMUST00000021959.11	1527	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAACAATTCAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55862473	55874030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55862658_55865604_55866081_55869391_55869556_55872320_55872452_55873479
ENSMUSG00000021500.18_0	chr13	+	5660	23	FSM	ENSMUSG00000021500.18	ENSMUST00000172272.8	5676	23	10	6	10	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGCATTGTCTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	55782849	55829063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_26	chr13	+	5606	24	FSM	ENSMUSG00000021500.18	ENSMUST00000223736.2	5612	24	0	6	0	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGCATTGTCTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	55782863	55829063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55782932_55782971_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_38	chr13	+	3293	22	FSM	ENSMUSG00000021500.18	ENST00000354283.8	3313	22	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGGAAGACATTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55785849	55826869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806912_55808529_55808613_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821928_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021500.18_5	chr13	+	5644	22	FSM	ENSMUSG00000021500.18	ENSMUST00000099479.4	5664	22	14	6	-10	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGCATTGTCTCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	55782853	55829063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55783009_55785838_55786028_55787603_55787748_55793183_55793281_55795439_55795606_55798227_55798380_55799856_55799971_55800725_55800892_55801414_55801536_55801816_55801993_55802821_55802944_55806832_55806983_55811031_55811197_55811591_55811755_55813999_55814194_55817524_55817663_55818016_55818167_55821753_55821931_55823708_55823928_55824582_55824728_55825333_55825408_55826596
ENSMUSG00000021501.5_0	chr13	+	1362	4	FSM	ENSMUSG00000021501.5	ENSMUST00000021963.5	1382	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGACTAATAGAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55770830	55780217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55771070_55772523_55772985_55776389_55776456_55779621
ENSMUSG00000021501.5_1	chr13	+	675	2	FSM	ENSMUSG00000021501.5	ENST00000676829.1	693	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCGAATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55770969	55780196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55771070_55779621
ENSMUSG00000021501.5_2	chr13	+	743	3	FSM	ENSMUSG00000021501.5	ENST00000514518.1	759	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAAAGCGAATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	55770967	55780196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55771070_55776389_55776456_55779621
ENSMUSG00000021501.5_3	chr13	+	1195	4	FSM	ENSMUSG00000021501.5	ENST00000678771.1	1217	4	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAATAAAAGCGAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	55770971	55780194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55771070_55772526_55772985_55776389_55776456_55779621
ENSMUSG00000021504.15_0	chr13	+	2187	5	FSM	ENSMUSG00000021504.15	ENSMUST00000100764.10	2195	5	3	5	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATACACTGGCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55747711	55758251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55757031
ENSMUSG00000021504.15_1	chr13	+	2119	6	FSM	ENSMUSG00000021504.15	ENSMUST00000064701.8	2130	6	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATACACTGGCAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	55747884	55758251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55748006_55751832_55752196_55755009_55755236_55756154_55756239_55756510_55756616_55757031
ENSMUSG00000021510.12_0	chr13	-	9429	4	FSM	ENSMUSG00000021510.12	ENSMUST00000012314.10	9455	4	25	1	25	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATGGTCTCTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67785885	67760882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67769969_67771586_67771683_67772153_67772281_67785765
ENSMUSG00000021514.19_0	chr13	+	2894	8	FSM	ENSMUSG00000021514.19	ENSMUST00000126879.8	2909	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCCCTATACCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	65426636	65445603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65443876
ENSMUSG00000021514.19_1	chr13	+	1563	8	FSM	ENSMUSG00000021514.19	ENSMUST00000130799.8	1580	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTTTTTTTCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	65426637	65452028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_65426802_65427074_65427155_65428075_65428203_65432734_65432831_65439636_65440120_65442209_65442299_65443413_65443541_65451631
ENSMUSG00000021518.5_0	chr13	+	3414	13	FSM	ENSMUSG00000021518.5	ENSMUST00000021990.4	3424	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCTTTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67080903	67146465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67081751_67093340_67093433_67101583_67101629_67104445_67104571_67111376_67111536_67114453_67114606_67120557_67120700_67122508_67122622_67124809_67124876_67135817_67135918_67142016_67142086_67143410_67143481_67145031
ENSMUSG00000021519.12_0	chr13	-	1460	8	FSM	ENSMUSG00000021519.12	ENSMUST00000021991.11	1479	8	11	8	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAATGTTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67081141	67060189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67060443_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948_67078288_67080998
ENSMUSG00000021519.12_1	chr13	-	1329	7	FSM	ENSMUSG00000021519.12	ENST00000523821.5	1349	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAAATAAATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	67078259	67060195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67060489_67062690_67062853_67064676_67064749_67065089_67065238_67070819_67071010_67076233_67076387_67077948
ENSMUSG00000021520.5_0	chr13	-	441	3	ISM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	2576	9	2576	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCATGGTTGGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	67050866	67048689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67048891_67049465_67049633_67050793
ENSMUSG00000021520.5_1	chr13	-	521	4	FSM	ENSMUSG00000021520.5	ENSMUST00000021993.5	535	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCATGGTTGGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	67053437	67048689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67048891_67049465_67049633_67050793_67050866_67053356
ENSMUSG00000021532.12_0	chr13	+	2415	7	FSM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTACTCTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	68730371	68740456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_68730470_68731657_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ENSMUSG00000021532.12_2	chr13	+	2309	6	ISM	ENSMUSG00000021532.12	ENSMUST00000051784.10	2421	7	1290	10	1290	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTTAGAGGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	68731656	68740447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_68733122_68733296_68733383_68735778_68735954_68737438_68737509_68738224_68738340_68740049
ENSMUSG00000021537.10_0	chr13	+	1200	5	FSM	ENSMUSG00000021537.10	ENSMUST00000022009.10	1226	5	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATCAGAAAAACCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	81931203	81945256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_81931477_81932759_81932896_81934961_81935077_81940074_81940267_81944772
ENSMUSG00000021540.17_0	chr13	+	6577	7	FSM	ENSMUSG00000021540.17	ENSMUST00000069557.14	6584	7	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTCTTTGTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	56850828	56890189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_56850945_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ENSMUSG00000021540.17_3	chr13	+	4539	7	FSM	ENSMUSG00000021540.17	ENSMUST00000109876.8	4570	7	21	10	21	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATAAAGATTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	56850885	56887763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_56851390_56871241_56871810_56875216_56875469_56876322_56876443_56880662_56880885_56883612_56883870_56885147
ENSMUSG00000021541.15_0	chr13	-	2515	10	FSM	ENSMUSG00000021541.15	ENST00000352189.8	2531	10	8	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAGGGCCTGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	57043589	56921584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_56921747_56923929_56924006_56930323_56930405_56931435_56931658_56937414_56937611_56952325_56952591_56958196_56958431_56970237_56970455_57035151_57035930_57043305
ENSMUSG00000021546.19_1	chr13	-	2958	18	FSM	ENSMUSG00000021546.19	ENSMUST00000116403.9	2970	18	4	8	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATTATGGGGTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58551153	58538963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877_58549932_58550206_58550327_58551084
ENSMUSG00000021546.19_106	chr13	-	1849	14	FSM	ENSMUSG00000021546.19	ENST00000360384.9	1860	14	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTATTTTTGGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	58548231	58539769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541873_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146
ENSMUSG00000021546.19_26	chr13	-	2741	16	FSM	ENSMUSG00000021546.19	ENSMUST00000224182.2	2754	16	9	4	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATGACGTGTGCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	58550321	58539052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021546.19_35	chr13	-	2694	16	FSM	ENSMUSG00000021546.19	ENSMUST00000225674.2	2704	16	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGTTATGACGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58549950	58539057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58540291_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58549877
ENSMUSG00000021546.19_36	chr13	-	2662	16	FSM	ENSMUSG00000021546.19	ENSMUST00000043269.14	2676	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTAGTTATGACGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58550307	58539057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58540231_58541009_58541180_58541505_58541589_58541666_58541683_58541889_58541974_58542123_58542179_58542291_58542600_58542978_58543108_58543387_58543502_58544001_58544074_58544640_58544714_58545566_58545611_58546969_58547027_58547706_58547805_58548146_58548232_58550206
ENSMUSG00000021548.11_0	chr13	+	2025	9	FSM	ENSMUSG00000021548.11	ENSMUST00000022030.11	2045	9	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTAGACCAGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85337539	85361835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350451_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021548.11_6	chr13	+	1047	9	FSM	ENSMUSG00000021548.11	ENSMUST00000163600.8	1055	9	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTTTCTTTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	85337598	85361024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_85337772_85338872_85338996_85344370_85344445_85345469_85345681_85350559_85350616_85354246_85354318_85356896_85357009_85359972_85360034_85360858
ENSMUSG00000021549.15_0	chr13	-	4553	25	FSM	ENSMUSG00000021549.15	ENSMUST00000109552.3	4563	25	8	2	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCTAGATCCATAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	85437140	85362900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_85364307_85364995_85365131_85366300_85366379_85367524_85367614_85369589_85369658_85371576_85371664_85372321_85372438_85373600_85373744_85374652_85374813_85375070_85375244_85376349_85376427_85376726_85376885_85377723_85377802_85378506_85378595_85381707_85381865_85382478_85382600_85386257_85386337_85392306_85392458_85394709_85394763_85398550_85398583_85400544_85400663_85403502_85403574_85404457_85404594_85406436_85406590_85436514
ENSMUSG00000021550.7_0	chr13	-	3035	4	FSM	ENSMUSG00000021550.7	ENSMUST00000022032.7	3051	4	16	0	16	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTAGATTTTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	58533023	58527630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58529824_58530221_58530418_58531963_58532224_58532637
ENSMUSG00000021552.8_0	chr13	-	1506	12	FSM	ENSMUSG00000021552.8	ENSMUST00000091579.6	1523	12	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCTGTGTGATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58421990	58381164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58381473_58384330_58384409_58384800_58384872_58386462_58386527_58389467_58389570_58391615_58391769_58398944_58398968_58403560_58403685_58407247_58407326_58411011_58411156_58411755_58412014_58421887
ENSMUSG00000021555.16_0	chr13	+	3784	23	FSM	ENSMUSG00000021555.16	ENSMUST00000022038.15	3793	23	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAGGAGCAGAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	59733117	59783736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_59733274_59733966_59734096_59743162_59743197_59745853_59745969_59747542_59747618_59748717_59748886_59755059_59755127_59755201_59755246_59755958_59756010_59756574_59756659_59757292_59757408_59760450_59760630_59764557_59764618_59765733_59765841_59770679_59770747_59772318_59772418_59773232_59773412_59775691_59775829_59776731_59776800_59777813_59777955_59778394_59778518_59780761_59780843_59782231
ENSMUSG00000021556.13_0	chr13	-	3944	10	FSM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCAGTTCTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	59823623	59782447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59823540
ENSMUSG00000021556.13_1	chr13	-	3863	9	ISM	ENSMUSG00000021556.13	ENSMUST00000022039.7	3954	10	10133	8	10102	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGCAGTTCTCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	59813492	59782447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340
ENSMUSG00000021556.13_3	chr13	-	3680	11	FSM	ENSMUSG00000021556.13	ENSMUST00000095739.10	3689	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCAAGTTTTAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	59823594	59782818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59785216_59786118_59786227_59787933_59788156_59790056_59790202_59792906_59793037_59797376_59797480_59798509_59798565_59812011_59812192_59813340_59813491_59822774_59822911_59823540
ENSMUSG00000021557.16_0	chr13	-	8158	26	FSM	ENSMUSG00000021557.16	ENSMUST00000022040.14	8174	26	6	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAAACTGCCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	59705119	59593565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59692200_59692266_59705036
ENSMUSG00000021557.16_14	chr13	-	4250	25	FSM	ENSMUSG00000021557.16	ENST00000337006.8	4269	25	8	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAGATAACTGTACATG	NA	NA	NA	NA	NA	NA	NA	NA	59705120	59597534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59598129_59608282_59608444_59609810_59609988_59613798_59613931_59621501_59621632_59622345_59622527_59623473_59623628_59624807_59624953_59630330_59630419_59643146_59643296_59643376_59643464_59644789_59644874_59647827_59648517_59652007_59652125_59655772_59655871_59660137_59660316_59661900_59662110_59665466_59665505_59672959_59673054_59676200_59676333_59678870_59679018_59679826_59679891_59680985_59681054_59684062_59684188_59704911
ENSMUSG00000021559.15_0	chr13	+	4174	24	FSM	ENSMUSG00000021559.15	ENST00000491893.5	4179	24	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGTCTTTATGGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	60750286	60909698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_60750411_60844044_60844267_60864491_60864631_60865827_60865958_60866115_60866165_60866250_60866278_60867423_60867577_60867924_60867971_60869587_60869678_60870833_60870927_60873110_60873231_60873629_60873729_60874375_60874475_60876241_60876341_60877190_60877389_60878638_60878837_60884057_60884157_60887868_60887947_60895914_60896138_60897006_60897196_60900027_60900167_60901922_60902044_60905162_60905352_60908448
ENSMUSG00000021567.16_2	chr13	-	1293	8	FSM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCCAAACAAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	73995134	73969080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995_73975057_73995060
ENSMUSG00000021567.16_3	chr13	-	1218	7	ISM	ENSMUSG00000021567.16	ENST00000296849.10	1299	8	20082	3	20082	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCCAAACAAGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	73975055	73969080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_73969657_73970808_73970937_73971390_73971476_73972367_73972513_73973184_73973281_73973802_73973931_73974995
ENSMUSG00000021569.11_0	chr13	-	3387	13	FSM	ENSMUSG00000021569.11	ENSMUST00000022053.11	3399	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74085891	74059465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74061459_74062606_74062677_74063576_74063690_74066529_74066684_74068113_74068221_74068466_74068554_74069291_74069356_74076029_74076103_74077777_74077869_74078278_74078335_74080976_74081107_74084225_74084392_74085608
ENSMUSG00000021572.10_0	chr13	-	3628	12	FSM	ENSMUSG00000021572.10	ENSMUST00000036456.8	3641	12	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATCACTCGTGGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74210412	74184625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74186448_74188169_74188282_74191624_74191752_74195154_74195352_74197014_74197154_74198178_74198484_74199533_74199741_74200999_74201179_74203001_74203111_74206420_74206614_74207560_74207689_74210302
ENSMUSG00000021576.7_0	chr13	-	1121	6	FSM	ENSMUSG00000021576.7	ENSMUST00000022060.7	1131	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGGCTGGTTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	74465431	74451628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUSG00000021576.7_4	chr13	-	1356	6	FSM	ENSMUSG00000021576.7	ENSMUST00000222759.2	1376	6	12	8	12	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTGGTTGCCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	74465687	74451643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74452168_74453659_74453770_74457808_74457962_74459786_74459832_74464448_74464511_74465225
ENSMUSG00000021576.7_7	chr13	-	925	5	FSM	ENSMUSG00000021576.7	ENST00000628729.2	950	5	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGCAATAAAGTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	74465332	74451663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74452168_74453659_74453770_74457802_74457962_74459786_74459832_74465225
ENSMUSG00000021577.15_0	chr13	-	2884	15	FSM	ENSMUSG00000021577.15	ENSMUST00000022062.8	2900	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGCTTTTGGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	74498389	74470378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74471293_74471959_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417_74479590_74480217_74480414_74481140_74481310_74482416_74482542_74485509_74485659_74487165_74487331_74487690_74487835_74491455_74491618_74492969_74493057_74498264
ENSMUSG00000021577.15_39	chr13	-	712	6	FSM	ENSMUSG00000021577.15	ENST00000515467.2	725	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATGAAACCTGACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	74479580	74471210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74471276_74471951_74472074_74475045_74475177_74475365_74475478_74476415_74476535_74479417
ENSMUSG00000021578.18_0	chr13	+	9545	3	FSM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	6	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCATGTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74498433	74513894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74498528_74500974_74501106_74504574
ENSMUSG00000021578.18_4	chr13	+	2673	4	FSM	ENSMUSG00000021578.18	ENSMUST00000160021.8	2682	4	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGAACTGCATTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	74498441	74510817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74498528_74500974_74501106_74504574_74504937_74508723
ENSMUSG00000021578.18_9	chr13	+	9452	2	ISM	ENSMUSG00000021578.18	ENSMUST00000022063.14	9559	3	2546	8	2511	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCATGTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74500973	74513894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_74501106_74504574
ENSMUSG00000021583.8_0	chr13	+	5628	19	FSM	ENSMUSG00000021583.8	ENSMUST00000169114.3	5644	19	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74787697	74841315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74788013_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ENSMUSG00000021583.8_14	chr13	+	2821	18	ISM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	6340	12	6340	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGCCAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	74794288	74838822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ENSMUSG00000021583.8_3	chr13	+	2922	19	FSM	ENSMUSG00000021583.8	ENST00000296754.7	2940	19	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGCCAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	74787954	74838822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74788057_74794289_74794834_74805751_74805891_74808388_74808524_74810427_74810549_74811527_74811683_74812227_74812342_74814217_74814350_74814562_74814695_74814836_74814909_74816076_74816232_74817518_74817599_74819426_74819611_74820862_74821020_74821713_74821899_74822740_74822903_74823381_74823523_74823943_74824026_74838692
ENSMUSG00000021585.11_0	chr13	-	4754	29	FSM	ENSMUSG00000021585.11	ENSMUST00000222588.2	4765	29	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGTTCTTGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	74918849	74840491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74918664
ENSMUSG00000021585.11_3	chr13	-	5125	32	FSM	ENSMUSG00000021585.11	ENSMUST00000223206.2	5141	32	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGTTCTTGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	74956918	74840491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74928621_74928694_74946774_74946838_74956554
ENSMUSG00000021585.11_38	chr13	-	2854	30	FSM	ENSMUSG00000021585.11	ENSMUST00000223033.2	2857	30	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTACTTTCTTAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	74918765	74842361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852322_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74896923_74896981_74902429_74902490_74918664
ENSMUSG00000021585.11_41	chr13	-	2887	31	FSM	ENSMUSG00000021585.11	ENSMUST00000065629.6	2910	31	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAATGATAGATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	74956049	74842420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74842953_74844009_74844072_74847223_74847293_74848742_74848836_74849334_74849371_74850676_74850770_74852219_74852325_74861764_74861864_74869050_74869123_74869295_74869347_74872896_74872981_74873482_74873585_74875393_74875490_74876458_74876549_74879197_74879246_74880212_74880297_74883348_74883451_74884863_74884954_74885054_74885142_74885708_74885748_74886336_74886418_74887955_74888055_74889467_74889537_74892748_74892839_74894109_74894224_74894701_74894756_74896323_74896363_74902429_74902490_74928621_74928694_74946774_74946838_74955937
ENSMUSG00000021587.6_0	chr13	+	5004	14	FSM	ENSMUSG00000021587.6	ENSMUST00000022075.6	5040	14	21	15	21	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGAACCAAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	75237965	75282965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_75238361_75241201_75241307_75244408_75244520_75246019_75246167_75247395_75247473_75254069_75254159_75258936_75259110_75260660_75260874_75263355_75263457_75273968_75274203_75274842_75275001_75275928_75276063_75278160_75278323_75280060
ENSMUSG00000021589.14_0	chr13	-	4956	12	FSM	ENSMUSG00000021589.14	ENSMUST00000022078.12	4980	12	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAAGTTCAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	76091972	76017665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76020581_76024289_76024387_76025491_76025659_76026915_76027090_76041024_76041146_76050296_76050410_76058748_76059115_76061461_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUSG00000021589.14_2	chr13	-	1645	5	FSM	ENSMUSG00000021589.14	ENSMUST00000109606.3	1676	5	21	10	21	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGAACATTTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76092023	76060870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76061574_76065811_76065967_76087570_76087758_76091325_76091552_76091649
ENSMUSG00000021591.9_0	chr13	+	1323	3	FSM	ENSMUSG00000021591.9	ENSMUST00000022082.8	1345	3	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAACTAATGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75987996	75998258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_75988295_75995288_75995418_75997362
ENSMUSG00000021592.19_0	chr13	-	3641	8	FSM	ENSMUSG00000021592.19	ENSMUST00000239063.2	3657	8	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAATTATCAAAATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	76246771	76208548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76210722_76213398_76213624_76214753_76214979_76220218_76220391_76222893_76223171_76239776_76239937_76242006_76242137_76246492
ENSMUSG00000021594.12_0	chr13	-	2624	5	FSM	ENSMUSG00000021594.12	ENSMUST00000091514.6	2644	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTCCAGTTCTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69759550	69721576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_69723316_69734703_69734855_69743034_69743137_69748349_69748517_69759085
ENSMUSG00000021595.19_0	chr13	+	2817	19	FSM	ENSMUSG00000021595.19	ENSMUST00000109699.11	2834	19	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTATCTTGGCATGAG	NA	NA	NA	NA	NA	NA	NA	NA	69760144	69782446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_69760308_69760419_69760578_69761056_69761162_69763530_69763637_69765524_69765597_69766224_69766310_69767564_69767758_69769723_69769799_69771281_69771413_69774596_69774671_69775154_69775286_69775678_69775776_69777653_69777836_69778120_69778214_69778746_69778883_69779353_69779435_69779650_69779790_69781346_69781387_69781690
ENSMUSG00000021596.17_0	chr13	+	2871	19	FSM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAACAAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	76789836	77178928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_76789946_76836606_76836750_76860198_76860279_76871786_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021596.17_16	chr13	+	2764	18	ISM	ENSMUSG00000021596.17	ENST00000429576.6	2886	19	46776	7	46776	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAACAAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	76836604	77178928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_76836750_76860198_76860279_76871786_76871899_76879889_76879929_76905104_76905276_76907808_76907940_76949477_76949665_76954287_76954382_76971091_76971195_76972890_76972994_76973324_76973427_76973841_76973917_76975800_76975921_77073590_77073645_77168870_77168981_77172901_77173012_77176740_77176839_77177998
ENSMUSG00000021597.17_0	chr13	-	3736	21	FSM	ENSMUSG00000021597.17	ENSMUST00000151524.9	3747	21	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATGTTTCATAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	77283587	77191212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_77192150_77194640_77194824_77195228_77195322_77197205_77197337_77197996_77198161_77199267_77199414_77214718_77214867_77231559_77231726_77232450_77232580_77238423_77238588_77239303_77239463_77240476_77240531_77249040_77249176_77251599_77251744_77252652_77252797_77254094_77254224_77260690_77260854_77273348_77273590_77274483_77274560_77274719_77274834_77283471
ENSMUSG00000021598.10_0	chr13	+	898	4	FSM	ENSMUSG00000021598.10	ENSMUST00000022089.10	913	4	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCATGTAATTCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69957973	69964222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_69958172_69959725_69959810_69961822_69961926_69963709
ENSMUSG00000021606.9_0	chr13	-	550	4	FSM	ENSMUSG00000021606.9	ENSMUST00000022097.6	568	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGGATAGTGAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	73476651	73468000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_73468180_73468412_73468536_73475534_73475589_73476457
ENSMUSG00000021607.10_0	chr13	+	695	3	FSM	ENSMUSG00000021607.10	ENSMUST00000221730.2	717	3	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAGAGAAAAATAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	73476641	73479843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73476740_73478978_73479211_73479478
ENSMUSG00000021607.10_3	chr13	+	913	2	FSM	ENSMUSG00000021607.10	ENSMUST00000022098.10	923	2	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73479113	73480294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73479211_73479478
ENSMUSG00000021607.10_5	chr13	+	821	1	NIC	ENSMUSG00000021607.10	novel	923	2	NA	NA	329	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTGGAGTAGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73479473	73480294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_73479500_73480300
ENSMUSG00000021608.16_0	chr13	+	3660	14	FSM	ENSMUSG00000021608.16	ENSMUST00000022099.15	3675	14	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTTACAGGCTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	73615321	73664532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73615637_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021608.16_8	chr13	+	2129	14	FSM	ENSMUSG00000021608.16	ENSMUST00000223060.2	2141	14	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73619869	73663232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73619954_73632379_73632523_73637005_73637221_73642920_73643034_73644298_73644360_73647417_73647477_73649474_73649510_73651159_73651215_73653620_73653704_73658114_73658241_73658966_73659121_73659418_73659518_73661938_73662081_73662472
ENSMUSG00000021610.9_0	chr13	+	2327	17	FSM	ENSMUSG00000021610.9	ENSMUST00000022102.9	2340	17	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTTTCTTAACCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	73752135	73768722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73761776_73761881_73762725_73762792_73763291_73763343_73764081_73764165_73764933_73764969_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_10	chr13	+	1541	12	FSM	ENSMUSG00000021610.9	ENST00000507807.3	1556	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCTAATAATATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	73755851	73768734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021610.9_5	chr13	+	2005	15	FSM	ENSMUSG00000021610.9	ENST00000630539.1	2019	15	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAATAAATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73752320	73768696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73752519_73753048_73753150_73754340_73754531_73755838_73755988_73757022_73757102_73759262_73759381_73759740_73759836_73760512_73760598_73762725_73762792_73763291_73763343_73764081_73764193_73765696_73765753_73765837_73765883_73766520_73766637_73768151
ENSMUSG00000021611.10_0	chr13	+	4298	16	FSM	ENSMUSG00000021611.10	ENSMUST00000022104.9	4313	16	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGGAATTGTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	73775040	73797953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73775368_73775469_73776794_73782270_73782467_73783538_73783720_73784475_73784656_73785324_73785484_73787274_73787377_73788104_73788191_73790094_73790209_73790483_73790556_73792367_73792557_73794299_73794427_73794895_73794958_73796065_73796191_73796406_73796536_73797028
ENSMUSG00000021614.17_0	chr13	-	12418	15	FSM	ENSMUSG00000021614.17	ENSMUST00000109546.9	12427	15	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGTGACTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	89890623	89803434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89851036_89853917_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUSG00000021614.17_1	chr13	-	8321	14	FSM	ENSMUSG00000021614.17	ENSMUST00000159910.8	8332	14	11	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	89890430	89804458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89836403_89841621_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUSG00000021614.17_2	chr13	-	5672	14	FSM	ENSMUSG00000021614.17	ENSMUST00000109544.9	5702	14	27	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACACTGATGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89890426	89804766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89851036_89853917_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUSG00000021614.17_3	chr13	-	2309	13	FSM	ENSMUSG00000021614.17	ENSMUST00000109543.9	2321	13	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTGAAAAAGCGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	89890359	89805182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_89805478_89805621_89805805_89810035_89810181_89826193_89826277_89827918_89828078_89832518_89832633_89833197_89833312_89860323_89860618_89869685_89869814_89869890_89870066_89873407_89873783_89879577_89879654_89890191
ENSMUSG00000021615.14_0	chr13	-	1530	8	FSM	ENSMUSG00000021615.14	ENSMUST00000022115.14	1540	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATGTTATTTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	90237717	89997039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_89997583_90089080_90089229_90139191_90139284_90140572_90140726_90149036_90149204_90210127_90210304_90219659_90219809_90237615
ENSMUSG00000021619.7_0	chr13	-	1543	7	ISM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	15545	0	15545	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	91356542	91083474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436
ENSMUSG00000021619.7_1	chr13	-	1583	8	FSM	ENSMUSG00000021619.7	ENSMUST00000022119.6	1583	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACTACTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	91372087	91083474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_91084365_91084705_91084822_91085411_91085510_91170688_91170787_91188968_91189108_91302335_91302432_91356436_91356553_91372057
ENSMUSG00000021621.16_0	chr13	-	1441	5	ISM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	1544	5	1544	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGTCTTTGTTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	91954280	91944656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869
ENSMUSG00000021621.16_1	chr13	-	1532	6	FSM	ENSMUSG00000021621.16	ENSMUST00000022121.13	1541	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTGTTGAACTGATC	NA	NA	NA	NA	NA	NA	NA	NA	91955816	91944652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_91945374_91946941_91947011_91948729_91948823_91948984_91949136_91953869_91954280_91955728
ENSMUSG00000021629.11_0	chr13	-	3163	16	FSM	ENSMUSG00000021629.11	ENSMUST00000067246.6	3179	16	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATTTGCAAATGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	100969920	100939156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100939970_100940369_100940499_100943041_100943269_100945591_100945788_100947813_100947944_100949155_100949314_100949805_100950015_100950190_100950480_100951103_100951275_100953516_100953594_100954633_100954722_100957626_100957715_100961423_100961510_100962959_100963027_100965407_100965531_100969608
ENSMUSG00000021635.15_0	chr13	-	2818	17	FSM	ENSMUSG00000021635.15	ENSMUST00000022136.14	2839	17	15	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCATCTTGTTCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	100787544	100753677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787329
ENSMUSG00000021635.15_4	chr13	-	2386	17	FSM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTCAGTGCTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	100787552	100753989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185_100786290_100787457
ENSMUSG00000021635.15_5	chr13	-	2291	16	ISM	ENSMUSG00000021635.15	ENSMUST00000177848.3	2392	17	1266	3	1266	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTCAGTGCTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	100786289	100753989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_100754441_100755601_100755660_100759305_100759427_100760927_100761075_100764017_100764165_100764267_100764354_100765907_100766091_100767563_100767676_100769389_100769460_100769703_100769830_100769958_100770012_100770370_100770508_100773449_100773607_100780027_100780112_100781498_100781754_100786185
ENSMUSG00000021636.16_0	chr13	-	1668	5	FSM	ENSMUSG00000021636.16	ENST00000647531.1	1685	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTTATCCCTAGACACTG	NA	NA	NA	NA	NA	NA	NA	NA	100749127	100733810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100733920_100734309_100734361_100736968_100737141_100737396_100737546_100747940
ENSMUSG00000021638.13_0	chr13	-	4034	9	FSM	ENSMUSG00000021638.13	ENSMUST00000069756.11	4052	9	13	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAAATACTAGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	100688993	100633019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100688894
ENSMUSG00000021638.13_3	chr13	-	2109	9	FSM	ENSMUSG00000021638.13	ENSMUST00000022140.12	2839	9	-9	739	-9	-388	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGAGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100689235	100635009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100675768_100676442_100677575_100677693_100689071
ENSMUSG00000021638.13_4	chr13	-	1252	7	ISM	ENSMUSG00000021638.13	ENST00000538151.2	1278	8	14	16314	14	-388	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGTGTTGAGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	100677672	100635009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_100635424_100639443_100639486_100642658_100642831_100647919_100648136_100651534_100651684_100671470_100671633_100677575
ENSMUSG00000021639.18_0	chr13	-	1635	16	FSM	ENSMUSG00000021639.18	ENSMUST00000066984.14	1656	16	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATAATCTCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100629057	100605096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625643_100625681_100625990_100626069_100626583_100626673_100628964
ENSMUSG00000021639.18_11	chr13	-	1299	14	FSM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGAAAATAGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	100626639	100605269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625990_100626069_100626583
ENSMUSG00000021639.18_12	chr13	-	1234	13	ISM	ENSMUSG00000021639.18	ENST00000513202.5	1310	14	580	11	580	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGAAAATAGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	100626059	100605269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_100605535_100607386_100607427_100612977_100613081_100613611_100613719_100615698_100615763_100617047_100617156_100617511_100617600_100617719_100617811_100619445_100619552_100622578_100622634_100622981_100623033_100625356_100625444_100625990
ENSMUSG00000021643.16_0	chr13	+	584	3	FSM	ENSMUSG00000021643.16	ENSMUST00000022145.15	601	3	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATTGGTGAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	100244529	100250739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100244738_100245530_100245640_100250472
ENSMUSG00000021643.16_1	chr13	+	457	3	FSM	ENSMUSG00000021643.16	ENSMUST00000152286.2	465	3	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACATTATTGGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	100244907	100250735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100244993_100245530_100245640_100250472
ENSMUSG00000021645.17_0	chr13	+	1215	9	FSM	ENSMUSG00000021645.17	ENSMUST00000022147.15	1222	9	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTGACTTTATAGATA	NA	NA	NA	NA	NA	NA	NA	NA	100261366	100274198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100261474_100263094_100263167_100263377_100263498_100264312_100264514_100264722_100264870_100267587_100267684_100268863_100268975_100272196_100272248_100273888
ENSMUSG00000021646.10_0	chr13	-	2103	17	FSM	ENSMUSG00000021646.10	ENSMUST00000022148.7	2123	17	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTACATTCTAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	100152134	100085047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100085465_100088663_100088750_100090643_100090759_100091122_100091280_100095312_100095380_100097407_100097485_100100315_100100389_100104148_100104245_100104341_100104442_100108286_100108352_100112916_100113031_100125043_100125157_100126755_100126884_100127719_100127822_100130074_100130160_100136757_100136825_100151893
ENSMUSG00000021650.8_0	chr13	-	1689	10	FSM	ENSMUSG00000021650.8	ENSMUST00000022153.8	1704	10	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCGGGTTGTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	99481201	99456157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99469395_99469475_99473170_99473289_99476408_99476539_99479820_99479914_99481071
ENSMUSG00000021650.8_3	chr13	-	952	8	FSM	ENSMUSG00000021650.8	ENST00000543322.5	964	8	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTGCTTTCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	99479909	99456681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99473170_99473289_99476408_99476539_99479820
ENSMUSG00000021650.8_4	chr13	-	705	6	FSM	ENSMUSG00000021650.8	ENST00000503868.5	716	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTGCTTTCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	99479910	99456681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99479820
ENSMUSG00000021650.8_6	chr13	-	833	7	FSM	ENSMUSG00000021650.8	ENST00000536805.5	846	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTGCTTTCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	99479908	99456681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99476408_99476539_99479820
ENSMUSG00000021650.8_7	chr13	-	746	6	ISM	ENSMUSG00000021650.8	ENST00000536805.5	846	7	3375	7	3375	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCTTTCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	99476540	99456682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_99456902_99458068_99458183_99463145_99463221_99466459_99466574_99468943_99469036_99476408
ENSMUSG00000021660.15_1	chr13	-	874	6	FSM	ENSMUSG00000021660.15	ENSMUST00000152704.8	888	6	10	4	-8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGTTTATCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	98453504	98446408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98452737_98452807_98453373
ENSMUSG00000021660.15_6	chr13	-	727	5	FSM	ENSMUSG00000021660.15	ENST00000678135.1	741	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGCTGAAGAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98453486	98446468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98446710_98447488_98447546_98449599_98449802_98450146_98450261_98453373
ENSMUSG00000021661.17_0	chr13	+	2193	9	FSM	ENSMUSG00000021661.17	ENSMUST00000150352.3	2217	9	17	7	17	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTTCAGACTCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	98399598	98411255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98410427
ENSMUSG00000021661.17_1	chr13	+	2306	8	FSM	ENSMUSG00000021661.17	ENSMUST00000123924.8	2328	8	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	NA	NA	NA	NA	NA	NA	NA	98399717	98410420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279
ENSMUSG00000021661.17_3	chr13	+	1741	9	FSM	ENSMUSG00000021661.17	ENSMUST00000022164.16	1755	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAGCTCTGATTATATG	NA	NA	NA	NA	NA	NA	NA	NA	98399757	98410420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_98399985_98402658_98403041_98403823_98403983_98404937_98405004_98407562_98407661_98408161_98408288_98408733_98408801_98409279_98409361_98409885
ENSMUSG00000021662.12_0	chr13	-	5368	36	FSM	ENSMUSG00000021662.12	ENSMUST00000109426.3	5387	36	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTATTAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98342664	98035984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98036325_98065918_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082249_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098056_98101915_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319_98133442_98165884_98165946_98166383_98166440_98180307_98180375_98187453_98187635_98190298_98190483_98211506_98211801_98213680_98213829_98282059_98282104_98342580
ENSMUSG00000021662.12_1	chr13	-	4227	27	FSM	ENSMUSG00000021662.12	ENST00000296799.8	4257	27	14	16	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAATTATTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98133429	98035988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98036319_98065918_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082249_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098056_98101915_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319
ENSMUSG00000021662.12_2	chr13	-	5292	35	ISM	ENSMUSG00000021662.12	ENSMUST00000109426.3	5387	36	60569	3	60569	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	98282106	98035979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_98036325_98065918_98066214_98067285_98067772_98073182_98073231_98073330_98073370_98075967_98076069_98078960_98079093_98081023_98081207_98082156_98082249_98083310_98083490_98088076_98088154_98090216_98090472_98093033_98093152_98094214_98094338_98097807_98098056_98101915_98102057_98103594_98103717_98103795_98103941_98105788_98105838_98106822_98106879_98114538_98114672_98114937_98115062_98117879_98117923_98121818_98121931_98124648_98124854_98130409_98130691_98133319_98133442_98165884_98165946_98166383_98166440_98180307_98180375_98187453_98187635_98190298_98190483_98211506_98211801_98213680_98213829_98282059
ENSMUSG00000021665.10_0	chr13	-	1889	14	FSM	ENSMUSG00000021665.10	ENSMUST00000022169.10	1905	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAGAGGGCTGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	97334855	97312844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_97313098_97313304_97313410_97313563_97313655_97314387_97314563_97315851_97315925_97317589_97317677_97318340_97318522_97320184_97320315_97322075_97322178_97325469_97325581_97325813_97325861_97327720_97327787_97330629_97330776_97334533
ENSMUSG00000021666.17_0	chr13	+	3063	20	FSM	ENSMUSG00000021666.17	ENSMUST00000042084.13	3074	20	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97274451	97312945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97274535_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUSG00000021666.17_1	chr13	+	3138	21	FSM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	5	14	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97274490	97312945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUSG00000021666.17_4	chr13	+	1818	16	FSM	ENSMUSG00000021666.17	ENSMUST00000161913.8	1829	16	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTACATCTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	97274498	97304994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97274568_97278434_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773
ENSMUSG00000021666.17_6	chr13	+	3062	20	ISM	ENSMUSG00000021666.17	ENSMUST00000161639.8	3157	21	3948	14	3886	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAAAAAAACAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97278433	97312945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_97278519_97279515_97279601_97282154_97282213_97282727_97282826_97285816_97285943_97286832_97286922_97289735_97289825_97291697_97291759_97291928_97292109_97296594_97296676_97297526_97297676_97299359_97299501_97299582_97299683_97301518_97301706_97304773_97304851_97307993_97308133_97309019_97309200_97309447_97309564_97311369_97311553_97312107
ENSMUSG00000021668.16_0	chr13	-	4201	15	FSM	ENSMUSG00000021668.16	ENSMUST00000022172.12	4225	15	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTACACTTATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	96678976	96617204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_96618763_96618965_96619000_96619998_96620914_96623315_96623488_96625689_96625787_96627444_96627478_96630336_96630504_96631915_96632041_96633110_96633351_96638026_96638181_96641018_96641151_96644719_96644873_96653146_96653267_96655536_96655696_96678834
ENSMUSG00000021669.16_0	chr13	+	5259	17	FSM	ENSMUSG00000021669.16	ENSMUST00000109444.3	5285	17	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGCTCACTTGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	96679258	96776665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752964_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257_96772395_96773625
ENSMUSG00000021669.16_6	chr13	+	1878	16	FSM	ENSMUSG00000021669.16	ENST00000642809.1	1894	16	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACAGGTATGGAGGATC	NA	NA	NA	NA	NA	NA	NA	NA	96679585	96772386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_96679768_96685704_96685840_96708418_96708536_96734712_96734821_96735897_96736037_96739580_96739665_96746281_96746440_96748768_96748862_96751281_96751369_96752970_96753058_96761202_96761299_96765520_96765654_96767268_96767340_96770580_96770710_96771361_96771492_96772257
ENSMUSG00000021670.15_0	chr13	-	4407	20	FSM	ENSMUSG00000021670.15	ENSMUST00000022176.15	4425	20	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTGAAAAGTGTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	96807432	96785480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028_96803217_96807318
ENSMUSG00000021670.15_11	chr13	-	4223	19	FSM	ENSMUSG00000021670.15	ENST00000680160.1	4243	19	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATGAAAGGAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	96803209	96785498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_96787142_96787517_96787673_96788408_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96792361_96792521_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028
ENSMUSG00000021670.15_19	chr13	-	3441	18	FSM	ENSMUSG00000021670.15	ENST00000343975.9	3462	18	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATAAAATACTCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	96803209	96786166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_96787142_96787517_96787673_96788363_96788523_96788603_96788745_96789165_96789337_96791323_96791430_96792057_96792216_96793070_96793266_96795090_96795267_96795378_96795627_96795724_96795886_96796401_96796519_96796625_96796733_96799536_96799643_96801269_96801355_96802317_96802406_96802620_96802733_96803028
ENSMUSG00000021671.10_0	chr13	+	5167	13	FSM	ENSMUSG00000021671.10	ENSMUST00000099295.6	5183	13	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCATTGTCTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	96524812	96554240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_96525040_96526730_96526871_96528095_96528184_96529734_96529853_96530999_96531078_96533147_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96547097_96547275_96550986
ENSMUSG00000021671.10_3	chr13	+	1202	7	FSM	ENSMUSG00000021671.10	ENST00000510798.5	1217	7	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGAGGGGCTGTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	96533166	96551122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_96533339_96535201_96535379_96537257_96537363_96538083_96538264_96539387_96539542_96540913_96541192_96550986
ENSMUSG00000021676.11_0	chr13	-	3283	23	FSM	ENSMUSG00000021676.11	ENST00000396234.7	3298	23	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACGGCTTATAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95844543	95764425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_95764629_95765454_95765564_95766496_95766635_95768531_95768693_95771971_95772185_95774225_95774314_95783269_95783412_95784685_95784789_95794310_95794444_95796625_95796859_95797506_95797592_95798094_95798236_95800570_95800796_95802100_95802265_95804875_95805026_95807736_95807946_95809492_95809563_95810192_95810265_95811821_95811906_95819417_95819561_95821361_95821530_95826208_95826300_95844385
ENSMUSG00000021681.9_0	chr13	-	3220	14	FSM	ENSMUSG00000021681.9	ENSMUST00000022189.9	3249	14	15	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATATAAACATATTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	95511845	95487204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_95488211_95489254_95489355_95490457_95490586_95492900_95492984_95493704_95493871_95495217_95495320_95498976_95499029_95499344_95499457_95501188_95501511_95504887_95505077_95505904_95506067_95507264_95507468_95508048_95508152_95511353
ENSMUSG00000021686.7_0	chr13	+	4005	27	FSM	ENSMUSG00000021686.7	ENSMUST00000022196.5	4021	27	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCATTTGCCTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	94495475	94702817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94495740_94527299_94527376_94531226_94531302_94539845_94539942_94540454_94540616_94545284_94545352_94554468_94554652_94576762_94576922_94580426_94580525_94582429_94582485_94582573_94582646_94584960_94585024_94587460_94587594_94591903_94592014_94598903_94599081_94608183_94608371_94609306_94609438_94613473_94613637_94616234_94616383_94619720_94619869_94630176_94630250_94638425_94638533_94664672_94664905_94668489_94668575_94679286_94679385_94684262_94684402_94702112
ENSMUSG00000021687.15_0	chr13	-	4241	9	FSM	ENSMUSG00000021687.15	ENSMUST00000022197.15	4259	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGCTAAATATAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	94422325	94337823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94421727
ENSMUSG00000021687.15_5	chr13	-	1866	9	FSM	ENSMUSG00000021687.15	ENSMUST00000152555.8	1877	9	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAATTAGTATTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	94422363	94339890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_94340672_94344643_94344762_94347084_94347187_94361402_94361563_94366221_94366351_94368579_94368689_94369589_94369689_94389500_94389579_94422073
ENSMUSG00000021690.11_0	chr13	-	8763	11	FSM	ENSMUSG00000021690.11	ENSMUST00000065537.9	8776	11	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAATTAACTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	93636310	93566615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_93571928_93575946_93576258_93577522_93578130_93579093_93579190_93589314_93589402_93589895_93590084_93590435_93590602_93596127_93596298_93601074_93601226_93609128_93609303_93634809
ENSMUSG00000021692.10_0	chr13	+	2027	12	FSM	ENSMUSG00000021692.10	ENSMUST00000022203.10	2051	12	9	15	9	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTAATATAAATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	107083675	107096253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_107083792_107084093_107084168_107085208_107085296_107086062_107086125_107086199_107086294_107086376_107086427_107088325_107088450_107088823_107088917_107089941_107090007_107091183_107091248_107093601_107093709_107095162
ENSMUSG00000021693.21_4	chr13	-	3752	18	FSM	ENSMUSG00000021693.21	ENST00000674916.1	3763	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTATAGTGGTGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	107158845	107096926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUSG00000021693.21_5	chr13	-	4157	20	FSM	ENSMUSG00000021693.21	ENST00000676413.1	4165	20	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTATAGTGGTGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	107158848	107096926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124460_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158465
ENSMUSG00000021693.21_6	chr13	-	3787	20	FSM	ENSMUSG00000021693.21	ENST00000676271.1	3796	20	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGGGTATAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	107158594	107096931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_107098733_107100848_107100985_107101525_107101628_107105145_107105297_107111002_107111071_107111878_107111990_107113163_107113369_107113493_107113637_107114531_107114624_107115479_107115544_107115984_107116076_107119031_107119195_107119699_107119755_107121571_107121668_107123776_107123878_107124517_107124584_107126545_107126601_107129670_107129788_107130355_107130451_107158519
ENSMUSG00000021694.19_0	chr13	+	2100	12	FSM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	5	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAATTGTTCTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108295276	108331513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105_108315231_108320258_108320457_108323730_108323815_108330589
ENSMUSG00000021694.19_1	chr13	+	799	9	ISM	ENSMUSG00000021694.19	ENSMUST00000054835.15	2111	12	20	16369	10	4018	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACGGCCTTCACCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108295291	108315150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_108295405_108297168_108297265_108302923_108303026_108305901_108306026_108309235_108309318_108310525_108310595_108312087_108312155_108314150_108314252_108315105
ENSMUSG00000021697.13_0	chr13	+	2546	11	FSM	ENSMUSG00000021697.13	ENSMUST00000051594.12	2563	11	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATACTATGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108452872	108526109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108453004_108460439_108460706_108493927_108494064_108498768_108498897_108500066_108500198_108505346_108505395_108510246_108510388_108519289_108519457_108521259_108521437_108523368_108523555_108525074
ENSMUSG00000021699.18_0	chr13	+	2292	15	FSM	ENSMUSG00000021699.18	ENST00000405755.6	2306	15	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCAGGACGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	109769244	110087998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_109769445_109876920_109877113_109894110_109894148_109906067_109906142_109909164_109909215_110040110_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUSG00000021699.18_11	chr13	+	4193	10	FSM	ENSMUSG00000021699.18	ENSMUST00000120664.8	4207	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTCTGGAAAAAAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	110039646	110089988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_110040224_110070401_110070496_110071839_110072013_110073210_110073310_110074500_110074666_110075795_110075896_110084773_110084929_110085947_110086071_110086742_110086926_110087464
ENSMUSG00000021701.9_0	chr13	+	2779	14	FSM	ENSMUSG00000021701.9	ENSMUST00000022212.9	2800	14	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACATAGAAACAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	110531588	110537366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_110531972_110532548_110532657_110532809_110532927_110533124_110533255_110533440_110533529_110534004_110534101_110534221_110534421_110534507_110534656_110534906_110535005_110535212_110535343_110535554_110535796_110535913_110536044_110536296_110536408_110536566
ENSMUSG00000021703.10_0	chr13	+	5350	12	FSM	ENSMUSG00000021703.10	ENSMUST00000049488.9	5366	12	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGAAATCATGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	92747604	92848445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_92747796_92797525_92797694_92819262_92819445_92819863_92819947_92821652_92821747_92825126_92825339_92827451_92827548_92829979_92830107_92838184_92838252_92842018_92842059_92842647_92842793_92844500
ENSMUSG00000021704.9_0	chr13	+	6273	9	FSM	ENSMUSG00000021704.9	ENSMUST00000076169.4	6275	9	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGGTGTATATCATT	NA	NA	NA	NA	NA	NA	NA	NA	92981294	92994736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_92981376_92981713_92981784_92982128_92982206_92983368_92983462_92984045_92984229_92984324_92984402_92985425_92985584_92986797_92986887_92989291
ENSMUSG00000021704.9_1	chr13	+	6193	8	ISM	ENSMUSG00000021704.9	ENSMUST00000076169.4	6275	9	418	2	418	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGGTGTATATCATT	NA	NA	NA	NA	NA	NA	NA	NA	92981712	92994736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_92981784_92982128_92982206_92983368_92983462_92984045_92984229_92984324_92984402_92985425_92985584_92986797_92986887_92989291
ENSMUSG00000021706.15_0	chr13	-	6125	18	FSM	ENSMUSG00000021706.15	ENSMUST00000022217.9	6150	18	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATCAGGCTCATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	92667358	92623622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_92625132_92629010_92629179_92630365_92630472_92631442_92631606_92636720_92636802_92640446_92640595_92640983_92641089_92642167_92642251_92644629_92644855_92645398_92645555_92646508_92646632_92647985_92648365_92650294_92650438_92653038_92653201_92655974_92656072_92657623_92659840_92660737_92660847_92667206
ENSMUSG00000021707.6_0	chr13	+	5330	6	FSM	ENSMUSG00000021707.6	ENSMUST00000022218.6	5347	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATGCCTTCAAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	92491242	92525553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_92491853_92492157_92492208_92494434_92494541_92502172_92502300_92504692_92504809_92521232
ENSMUSG00000021708.19_0	chr13	-	5470	27	FSM	ENSMUSG00000021708.19	ENST00000265080.9	5485	27	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGTTCACAGGCCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	92268005	92030776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_92032644_92033731_92033801_92034470_92034589_92035750_92035831_92038637_92038836_92041824_92041910_92044127_92044232_92044482_92044544_92050637_92050751_92067946_92068051_92117065_92117156_92120299_92120408_92130592_92130976_92131571_92131821_92136075_92136159_92152237_92152375_92152876_92152944_92154148_92154310_92159298_92159418_92160102_92160213_92165003_92165198_92165531_92165612_92167184_92167439_92172401_92172492_92174684_92174833_92190056_92190164_92267714
ENSMUSG00000021709.15_1	chr13	-	6357	26	FSM	ENSMUSG00000021709.15	ENSMUST00000022222.12	6369	26	6	6	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCGAGTCTTGGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	104057016	103955300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961357_103964414_103964532_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ENSMUSG00000021709.15_12	chr13	-	4646	24	FSM	ENSMUSG00000021709.15	ENST00000380938.6	4669	24	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAACTGGTATTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104056921	103956802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103957315_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981321_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745_104025794_104056753
ENSMUSG00000021709.15_22	chr13	-	4143	24	FSM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTATAGACAAAAACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	104025795	103957204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648_104022847_104025745
ENSMUSG00000021709.15_23	chr13	-	4084	23	ISM	ENSMUSG00000021709.15	ENST00000511297.5	4157	24	2958	14	2958	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTATAGACAAAAACAATGG	NA	NA	NA	NA	NA	NA	NA	NA	104022837	103957204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_103957315_103959318_103959394_103959821_103959915_103961227_103961435_103970005_103971537_103975814_103975999_103977661_103977777_103979964_103980142_103981331_103981496_103982011_103982134_103987252_103987353_103991326_103991397_103993502_103993619_103993918_103994049_103994358_103994432_103995883_103996029_103996578_103996654_103998787_103998852_104003156_104003214_104004550_104004641_104005327_104005407_104020650_104020769_104022648
ENSMUSG00000021710.12_0	chr13	-	4156	13	FSM	ENSMUSG00000021710.12	ENSMUST00000109315.5	4162	13	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGCTCACAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	104246116	104159564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104161589_104172094_104172232_104173361_104173491_104173805_104173993_104182696_104182899_104187002_104187370_104189011_104189148_104195248_104195410_104195974_104196078_104198252_104198361_104205702_104205852_104209270_104209531_104245923
ENSMUSG00000021711.18_0	chr13	-	3518	12	FSM	ENSMUSG00000021711.18	ENSMUST00000144060.8	3538	12	10	10	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATAAAGGATCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	104314967	104278666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_4	chr13	-	3491	13	FSM	ENSMUSG00000021711.18	ENSMUST00000141557.8	3502	13	8	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATAAAGGATCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	104314925	104278666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104280754_104280911_104281060_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021711.18_6	chr13	-	2330	13	FSM	ENSMUSG00000021711.18	ENSMUST00000022224.16	2342	13	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCACATCTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104314925	104279830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104280754_104280911_104281063_104283751_104283853_104284591_104284791_104286557_104286692_104288672_104288691_104290803_104290849_104291344_104291418_104297474_104297603_104303366_104303452_104304970_104305071_104306327_104306397_104314621
ENSMUSG00000021712.16_0	chr13	+	3398	11	FSM	ENSMUSG00000021712.16	ENSMUST00000022225.12	3416	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCTTAAATCTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	104315314	104339517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738
ENSMUSG00000021712.16_3	chr13	+	1795	12	FSM	ENSMUSG00000021712.16	ENST00000274327.11	1807	12	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTTGAATTGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	104315375	104339364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104315470_104317581_104317745_104321233_104321356_104323908_104324188_104324568_104324752_104326170_104326387_104328524_104328660_104334497_104334628_104335101_104335213_104336576_104336702_104337738_104337816_104339204
ENSMUSG00000021713.10_0	chr13	-	2335	11	FSM	ENSMUSG00000021713.10	ENSMUST00000022226.6	2342	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACGTGTCAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	104365323	104341631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104361857_104361961_104365113
ENSMUSG00000021713.10_3	chr13	-	1998	10	FSM	ENSMUSG00000021713.10	ENST00000538977.5	2009	10	11	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	104365327	104341869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104342156_104343606_104343790_104344504_104344587_104346121_104346304_104350033_104350224_104353596_104353788_104356544_104356993_104359345_104359467_104359599_104359701_104365113
ENSMUSG00000021714.16_0	chr13	+	1297	10	FSM	ENSMUSG00000021714.16	ENSMUST00000070761.10	1306	10	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGACACTTTATGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	104365465	104383635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104365511_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104383074
ENSMUSG00000021714.16_1	chr13	+	1198	10	FSM	ENSMUSG00000021714.16	ENSMUST00000022227.8	1217	10	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAGGGCATAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	104365907	104386118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104366165_104367236_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104385868
ENSMUSG00000021714.16_13	chr13	+	1252	9	ISM	ENSMUSG00000021714.16	ENSMUST00000070761.10	1306	10	1774	6	1341	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTGACACTTTATGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	104367236	104383635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_104367388_104369165_104369223_104370654_104370728_104372686_104372734_104378696_104378780_104378862_104378962_104379253_104379381_104381785_104381840_104383074
ENSMUSG00000021715.13_0	chr13	-	2047	14	FSM	ENSMUSG00000021715.13	ENSMUST00000022228.13	2071	14	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGCATATAGGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	104953446	104767656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104768247_104794536_104794641_104797814_104797925_104856929_104857028_104929006_104929159_104932917_104932952_104933771_104933852_104938639_104938710_104940758_104940863_104941425_104941525_104943144_104943289_104944227_104944341_104947724_104947822_104953194
ENSMUSG00000021716.15_0	chr13	+	2346	5	FSM	ENSMUSG00000021716.15	ENSMUST00000022230.15	2365	5	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAATAAAAATAAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	104953697	104975776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104953875_104963562_104963611_104969361_104969506_104970755_104970829_104973872
ENSMUSG00000021725.10_22	chr13	-	2353	23	FSM	ENSMUSG00000021725.10	ENST00000514342.6	2376	23	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCGTAACTTGAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	117161946	116999646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_116999681_117000721_117000796_117003571_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279_117075318_117160710_117160766_117161711
ENSMUSG00000021725.10_7	chr13	-	2805	25	FSM	ENSMUSG00000021725.10	ENST00000514067.6	2827	25	6	16	6	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGATTGAAAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	117161913	116991464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_116991829_116998745_116998831_116999610_116999681_117000721_117000796_117003571_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279_117075318_117160710_117160766_117161711
ENSMUSG00000021725.10_8	chr13	-	2938	26	FSM	ENSMUSG00000021725.10	ENSMUST00000223949.2	2965	26	11	16	-1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGATTGAAAAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	117161920	116991464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_116991829_116998745_116998831_116999610_116999681_117000721_117000796_117003571_117003642_117004661_117004735_117004975_117005089_117005958_117006008_117008178_117008247_117013066_117013133_117014026_117014153_117015530_117015624_117029535_117029632_117029732_117029784_117031171_117031731_117032191_117032318_117039325_117039393_117047400_117047492_117047919_117047981_117059105_117059201_117061501_117061580_117063052_117063124_117063837_117063928_117075279_117075318_117160710_117160766_117161711
ENSMUSG00000021728.9_0	chr13	+	2907	9	FSM	ENSMUSG00000021728.9	ENSMUST00000022242.9	2923	9	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTAGCTCCTTACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	117356819	117410947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_117357494_117369262_117369353_117385807_117386001_117386236_117386323_117400930_117401059_117403855_117404136_117405465_117405500_117408580_117408636_117409580
ENSMUSG00000021730.9_0	chr13	+	5830	9	FSM	ENSMUSG00000021730.9	ENST00000303230.6	5842	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGGATGGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	117738973	118115706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_117739632_117793141_117793566_117946442_117946605_118010401_118010621_118039282_118039430_118062079_118062321_118108102_118108268_118111787_118112228_118112332
ENSMUSG00000021730.9_1	chr13	+	5823	9	NNC	ENSMUSG00000021730.9	novel	5842	9	NA	NA	13	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGATATGGGGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117738978	118115701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr13_+_117739632_117793141_117793566_117946442_117946605_118010401_118010621_118039282_118039430_118062079_118062321_118108102_118108268_118111787_118112228_118112329
ENSMUSG00000021731.11_0	chr13	-	3301	5	FSM	ENSMUSG00000021731.11	ENSMUST00000022245.10	3319	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACCATAACTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	118523777	118514923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_118517206_118519411_118519589_118521102_118521209_118521769_118521916_118523187
ENSMUSG00000021732.15_0	chr13	+	4094	3	FSM	ENSMUSG00000021732.15	ENSMUST00000022246.9	4114	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAATAAAAGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	118851245	118928642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_118852248_118918041_118918146_118925654
ENSMUSG00000021733.12_0	chr14	-	8113	25	FSM	ENSMUSG00000021733.12	ENSMUST00000057015.8	8132	25	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCACGGCCTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	7767473	7669830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUSG00000021733.12_15	chr14	-	3564	24	FSM	ENSMUSG00000021733.12	ENSMUST00000226079.3	3594	24	21	9	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATAGAGACTACATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	7766663	7673461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUSG00000021733.12_16	chr14	-	4055	26	FSM	ENSMUSG00000021733.12	ENSMUST00000223761.3	4070	26	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCATAGAGACTACATTA	NA	NA	NA	NA	NA	NA	NA	NA	7766679	7673463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726980_7727350_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUSG00000021733.12_17	chr14	-	3958	25	FSM	ENSMUSG00000021733.12	ENSMUST00000223981.3	3968	25	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCATAGAGACTACATTA	NA	NA	NA	NA	NA	NA	NA	NA	7766684	7673463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726974_7727350_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7766482
ENSMUSG00000021733.12_5	chr14	-	3774	25	FSM	ENSMUSG00000021733.12	ENSMUST00000224049.3	3792	25	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAATGACATGTCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	7750920	7673187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7675705_7675814_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7729888_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7750872
ENSMUSG00000021733.12_9	chr14	-	4094	25	FSM	ENSMUSG00000021733.12	ENSMUST00000224333.3	4097	25	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAAATGACATGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7750935	7673188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7673687_7678598_7678697_7683339_7683472_7687540_7687715_7690868_7690938_7694334_7694587_7694710_7694873_7696412_7696527_7697065_7697228_7698448_7698555_7702777_7703024_7704052_7704187_7707240_7707416_7709421_7709529_7712331_7712479_7719240_7719329_7721139_7721298_7723679_7723796_7726974_7727350_7729849_7730039_7731418_7731580_7732255_7732395_7735894_7736042_7740479_7740562_7750872
ENSMUSG00000021737.5_0	chr14	+	1375	8	FSM	ENSMUSG00000021737.5	ENSMUST00000022256.5	1387	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTTTCTTAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	8348788	8357587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_8349025_8349570_8349777_8352792_8352939_8353159_8353380_8353506_8353616_8355471_8355641_8357159_8357238_8357376
ENSMUSG00000021738.6_0	chr14	-	6823	12	FSM	ENSMUSG00000021738.6	ENSMUST00000022257.4	6853	12	24	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATACGGCTGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	8457248	8362466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8416739_8416845_8456107_8456177_8456393_8456691_8457012
ENSMUSG00000021738.6_1	chr14	-	2666	9	FSM	ENSMUSG00000021738.6	ENST00000484332.1	2682	9	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATCATGGAGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	8402054	8366131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8366457_8368861_8369829_8373447_8373570_8373864_8374064_8374161_8374407_8379653_8379737_8380307_8380568_8382230_8382481_8401839
ENSMUSG00000021747.13_0	chr14	+	2644	16	FSM	ENSMUSG00000021747.13	ENSMUST00000102996.4	2681	16	30	7	30	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAAGAGAGTGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	13803562	14038574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_13803796_13807424_13807515_13810290_13810385_13825303_13825377_13891310_13891426_13911582_13911740_13933117_13933256_13951006_13951144_13951780_13951935_13953205_13953323_13954397_13954521_13958579_13958912_13987152_13987357_13996360_13996423_14026822_14026918_14038054
ENSMUSG00000021748.10_0	chr14	+	1497	10	FSM	ENSMUSG00000021748.10	ENSMUST00000022268.10	1513	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATGAAGTCTTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	14296758	14303772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_14296883_14296955_14297010_14298242_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303061_14303291
ENSMUSG00000021748.10_6	chr14	+	1271	8	FSM	ENSMUSG00000021748.10	ENST00000474765.1	1284	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTTAAGTTAAATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	14298250	14303632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_14298351_14298443_14298507_14298597_14298634_14299326_14299613_14299953_14300065_14300336_14300429_14302918_14303161_14303291
ENSMUSG00000021750.17_0	chr14	+	3114	4	FSM	ENSMUSG00000021750.17	ENSMUST00000036070.15	3151	4	34	3	32	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCATTGTAAGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14160027	14173496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_14160289_14168539_14168715_14170106_14170264_14170975
ENSMUSG00000021751.14_0	chr14	+	2031	14	FSM	ENSMUSG00000021751.14	ENST00000459701.6	2051	14	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCATGGCCTTCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	14212909	14244032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_14213072_14213615_14213779_14213966_14214119_14214471_14214580_14216210_14216331_14216774_14216849_14218096_14218270_14219706_14219870_14221647_14221839_14223329_14223510_14225944_14226051_14228294_14228513_14239481_14239615_14243944
ENSMUSG00000021752.15_0	chr14	-	1626	3	FSM	ENSMUSG00000021752.15	ENSMUST00000022272.14	1650	3	10	14	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAATATGAATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	14255623	14246223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14247587_14249552_14249623_14255430
ENSMUSG00000021752.15_1	chr14	-	3040	3	FSM	ENSMUSG00000021752.15	ENSMUST00000170111.3	3052	3	0	12	0	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAATATGAATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	14255878	14246223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14247587_14249552_14249623_14254271
ENSMUSG00000021754.18_0	chr13	-	6963	20	FSM	ENSMUSG00000021754.18	ENSMUST00000109267.9	6978	20	3	12	3	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAAGTTAACTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	111945524	111882973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_111885584_111886976_111887109_111887752_111887896_111888898_111889031_111890272_111890436_111891176_111891330_111891644_111892897_111893146_111893337_111893627_111893720_111894599_111894722_111896485_111896765_111899587_111899772_111900032_111900115_111900615_111900738_111904496_111904646_111905010_111905128_111905820_111906022_111909129_111909331_111912401_111912553_111945036
ENSMUSG00000021756.13_0	chr13	+	8664	17	FSM	ENSMUSG00000021756.13	ENSMUST00000183663.8	8678	17	9	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGCATACGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112600612	112646615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112600785_112609120_112609208_112611564_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_1	chr13	+	5202	15	FSM	ENSMUSG00000021756.13	ENSMUST00000070731.11	5207	15	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATGTAGTGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	112611546	112643394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631324_112631723_112631907_112633818_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_2	chr13	+	2550	14	FSM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGACTGGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	112611596	112640974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112611644_112616518_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021756.13_6	chr13	+	2494	13	ISM	ENSMUSG00000021756.13	ENST00000381294.7	2555	14	4931	5	4931	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGGACTGGCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	112616527	112640974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_112616825_112617957_112618079_112624242_112624404_112625037_112625193_112627016_112627177_112630122_112630206_112631112_112631339_112633832_112633921_112634255_112634403_112635282_112635424_112637646_112637744_112639324_112639407_112640238
ENSMUSG00000021758.15_0	chr13	-	2758	21	FSM	ENSMUSG00000021758.15	ENST00000353507.9	2763	21	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTTTTCCAACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	112788869	112734871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_112735557_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865_112787953_112788809
ENSMUSG00000021758.15_1	chr13	-	2690	20	ISM	ENSMUSG00000021758.15	ENST00000353507.9	2763	21	930	0	891	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAGTTTTCCAACAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	112787944	112734871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_112735557_112736151_112736269_112736385_112736657_112737945_112738046_112741020_112741167_112748508_112748676_112750230_112750361_112757149_112757305_112757741_112757895_112758698_112758842_112759191_112759240_112759332_112759381_112761314_112761357_112761878_112761960_112765371_112765432_112770418_112770470_112772501_112772580_112777683_112777762_112781042_112781101_112787865
ENSMUSG00000021759.15_0	chr13	+	1582	6	FSM	ENSMUSG00000021759.15	ENSMUST00000016144.12	1598	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAAGCGTTTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	112937333	113004420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112937801_112971392_112971548_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000021759.15_2	chr13	+	1260	6	FSM	ENSMUSG00000021759.15	ENSMUST00000070951.8	1272	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTACAGACCATTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	112937408	113004176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112937801_112987936_112988089_112993279_112993561_112996177_112996236_113003329_113003507_113003976
ENSMUSG00000021760.6_0	chr13	-	752	2	FSM	ENSMUSG00000021760.6	ENSMUST00000231962.2	769	2	7	10	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAGTGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113182920	113179296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113179834_113182705
ENSMUSG00000021760.6_1	chr13	-	1030	3	FSM	ENSMUSG00000021760.6	ENSMUST00000022282.6	1042	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAGTGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113182936	113179296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113179834_113181965_113182228_113182705
ENSMUSG00000021764.9_0	chr13	-	1682	5	FSM	ENSMUSG00000021764.9	ENSMUST00000022286.8	1698	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTAGTGTTGCTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	114524785	114424337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_114425403_114444352_114444427_114453392_114453566_114487983_114488063_114524494
ENSMUSG00000021765.10_0	chr13	-	2814	6	FSM	ENSMUSG00000021765.10	ENSMUST00000223640.3	2833	6	12	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAGTGAAAAAATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114595475	114588832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_114590342_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUSG00000021765.10_1	chr13	-	1841	6	FSM	ENSMUSG00000021765.10	ENSMUST00000022287.8	1851	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTAAACCATTTAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	114595475	114589505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_114590042_114590815_114591047_114591656_114591882_114592219_114592439_114592898_114593091_114595037
ENSMUSG00000021767.20_6	chr14	+	5886	17	FSM	ENSMUSG00000021767.20	ENST00000372714.6	5910	17	8	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	3572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTAAAAAAAAAAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	21550926	21721066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21551147_21566693_21567567_21659821_21659931_21668958_21669075_21669285_21669368_21672022_21672156_21674900_21674957_21676786_21676909_21678880_21678997_21681389_21681532_21684543_21684706_21687614_21687709_21710810_21711043_21711495_21711656_21712225_21712535_21714524_21714817_21718398
ENSMUSG00000021768.16_0	chr14	-	1718	8	FSM	ENSMUSG00000021768.16	ENSMUST00000075040.9	1745	8	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATAATAAAGCTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21798674	21783473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_21783920_21784963_21785185_21790171_21790346_21793502_21793598_21794815_21795011_21796377_21796586_21797488_21797707_21798513
ENSMUSG00000021770.12_0	chr14	+	1557	6	FSM	ENSMUSG00000021770.12	ENSMUST00000022292.10	1574	6	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21800603	21843358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21800849_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUSG00000021770.12_1	chr14	+	6791	6	FSM	ENSMUSG00000021770.12	ENSMUST00000119430.3	6801	6	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGTATGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21801619	21848784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21801673_21825030_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUSG00000021770.12_2	chr14	+	6747	5	ISM	ENSMUSG00000021770.12	ENSMUST00000119430.3	6801	6	23411	1	23411	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGCTTGTTATAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	21825030	21848793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_21825624_21830153_21830250_21833746_21833865_21842471_21842623_21843004
ENSMUSG00000021771.15_0	chr14	+	1936	10	FSM	ENSMUSG00000021771.15	ENSMUST00000022293.14	1954	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTAATACTCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	21881345	21895938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21881736_21881918_21881978_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021771.15_9	chr14	+	1237	9	FSM	ENSMUSG00000021771.15	ENST00000313132.8	1256	9	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCGTGCCATGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21882380	21895578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21882491_21882951_21883021_21883868_21883919_21887811_21887965_21888058_21888112_21888458_21888687_21890486_21890638_21893949_21894008_21895213
ENSMUSG00000021772.16_0	chr14	-	4574	4	FSM	ENSMUSG00000021772.16	ENSMUST00000132374.9	4598	4	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAATTAGTCCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	4198541	4185697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_4189750_4191150_4191393_4192889_4193001_4198372
ENSMUSG00000021773.12_0	chr14	-	2296	7	FSM	ENSMUSG00000021773.12	ENSMUST00000124549.9	2314	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTGTAATCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21899033	21895928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_21897496_21897681_21897816_21897940_21897996_21898069_21898189_21898277_21898384_21898608_21898737_21898846
ENSMUSG00000021774.14_0	chr14	+	1387	6	FSM	ENSMUSG00000021774.14	ENSMUST00000022296.7	1408	6	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTACTGACCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4137847	4186964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4138010_4138561_4138747_4143265_4143317_4184427_4184561_4185274_4185423_4186256
ENSMUSG00000021775.12_0	chr14	+	4648	8	FSM	ENSMUSG00000021775.12	ENSMUST00000090543.6	4663	8	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGAGTTTATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4230574	4265633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_4230886_4247442_4247710_4249639_4249729_4252901_4253047_4254202_4254823_4257731_4257918_4261566_4261778_4262814
ENSMUSG00000021782.15_0	chr14	-	7774	31	FSM	ENSMUSG00000021782.15	ENSMUST00000073687.13	7784	31	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	24295980	24184022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24295214
ENSMUSG00000021782.15_5	chr14	-	7824	32	FSM	ENSMUSG00000021782.15	ENSMUST00000090398.11	7851	32	27	0	27	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGTGTGTAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	24295961	24184022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_24185742_24186636_24186747_24187197_24187308_24188304_24188433_24188675_24188820_24194369_24194564_24196219_24196391_24197140_24197290_24198275_24198460_24199430_24199581_24200206_24200341_24200579_24200743_24204298_24204450_24204667_24204758_24205208_24205322_24206539_24206685_24207013_24207138_24207802_24208823_24210312_24210406_24214098_24214203_24214465_24214642_24215312_24215441_24216228_24216362_24220497_24220624_24222087_24222273_24226463_24226777_24227795_24228056_24240385_24240570_24241215_24241360_24242859_24243023_24252365_24252435_24295214
ENSMUSG00000021785.9_0	chr14	-	2921	12	FSM	ENSMUSG00000021785.9	ENSMUST00000022310.7	2935	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTTATAGAGTGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	6220474	6157841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6178827_6178993_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUSG00000021785.9_11	chr14	-	2329	11	FSM	ENSMUSG00000021785.9	ENSMUST00000224656.2	2329	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGCCTTTTCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6220436	6158230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_6158905_6159271_6159450_6175089_6175276_6186289_6186401_6187877_6188024_6188948_6189071_6191741_6191965_6199122_6199289_6208962_6209200_6215006_6215122_6220265
ENSMUSG00000021786.14_0	chr14	+	3419	3	FSM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAATATAAATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	6226431	6231061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_6226474_6226964_6227973_6228692
ENSMUSG00000021786.14_1	chr14	+	3378	2	ISM	ENSMUSG00000021786.14	ENSMUST00000112625.9	3434	3	534	13	534	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATATAAATGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	6226965	6231063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_6227973_6228692
ENSMUSG00000021792.16_0	chr14	-	1529	6	FSM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACCAGGAATCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	40735732	40715704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726161_40735654
ENSMUSG00000021792.16_1	chr14	-	1444	5	ISM	ENSMUSG00000021792.16	ENSMUST00000022317.15	1537	6	9571	16	9571	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATATTCACCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	40726161	40715712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997
ENSMUSG00000021792.16_2	chr14	-	1561	6	FSM	ENSMUSG00000021792.16	ENSMUST00000118466.8	1567	6	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGAATCACCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	40735742	40715699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40716595_40719669_40719835_40720800_40720942_40724392_40724485_40725997_40726178_40735654
ENSMUSG00000021794.17_0	chr14	+	3376	13	FSM	ENSMUSG00000021794.17	ENSMUST00000022322.17	3390	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTAGAAGTTCTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	34032693	34067218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064139_34065560
ENSMUSG00000021794.17_2	chr14	+	2881	13	FSM	ENSMUSG00000021794.17	ENST00000684338.1	2896	13	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTAACTTGGTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	34032866	34066813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_34033300_34041838_34041920_34043724_34043781_34047469_34047534_34051245_34051341_34056068_34056249_34057258_34057397_34058049_34058188_34058452_34058534_34060716_34060841_34061883_34061976_34064075_34064222_34065560
ENSMUSG00000021796.16_0	chr14	-	5941	13	FSM	ENSMUSG00000021796.16	ENSMUST00000049005.15	5956	13	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACCACTATTGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	34224632	34132693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_34136627_34136716_34136848_34137663_34137840_34144516_34144815_34146902_34147096_34151612_34151758_34156335_34156436_34156594_34156692_34163055_34163159_34165775_34165939_34169728_34169936_34182455_34182570_34224351
ENSMUSG00000021798.15_0	chr14	-	4946	15	FSM	ENSMUSG00000021798.15	ENSMUST00000090040.12	4981	15	23	12	-3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAATTCAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34310594	34248693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_34251507_34258521_34258638_34263824_34263946_34264383_34264565_34265929_34266375_34274133_34274280_34277299_34277486_34288813_34288851_34289354_34289525_34291669_34291685_34293674_34293879_34294946_34294970_34300551_34300628_34301132_34301285_34310333
ENSMUSG00000021798.15_10	chr14	-	1360	8	FSM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTCCTACCTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	34310420	34283563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_34283839_34288813_34288851_34289354_34289525_34293674_34293879_34298942_34299302_34300551_34300628_34301132_34301285_34310333
ENSMUSG00000021798.15_11	chr14	-	1274	7	ISM	ENSMUSG00000021798.15	ENST00000372056.8	1368	8	9141	2	9141	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTCCTACCTCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	34301285	34283563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_34283839_34288813_34288851_34289354_34289525_34293674_34293879_34298942_34299302_34300551_34300628_34301132
ENSMUSG00000021798.15_7	chr14	-	1480	10	FSM	ENSMUSG00000021798.15	ENSMUST00000227819.2	1499	10	4	15	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAACAAACCAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34310635	34283232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_34283839_34288813_34288851_34289354_34289525_34291669_34291685_34293674_34293879_34294946_34294970_34300551_34300628_34301132_34301285_34310333_34310453_34310557
ENSMUSG00000021798.15_8	chr14	-	1572	8	FSM	ENSMUSG00000021798.15	ENSMUST00000022330.9	1586	8	10	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAACAAACCAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34310610	34283232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_34283839_34288813_34288851_34289354_34289525_34298942_34299302_34300551_34300628_34301132_34301285_34310333_34310453_34310557
ENSMUSG00000021803.11_0	chr14	-	4306	17	FSM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	16	10	16	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAAGGATAAACTGACC	NA	NA	NA	NA	NA	NA	NA	NA	36820288	36799823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36801899_36802418_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ENSMUSG00000021803.11_1	chr14	-	2117	16	ISM	ENSMUSG00000021803.11	ENSMUST00000022337.11	4332	17	128	2607	12	-7	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGAGTACTATGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	36820176	36802420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_36802677_36803289_36803519_36804100_36804169_36804720_36804886_36806880_36807034_36807468_36807673_36809333_36809435_36810894_36810974_36811323_36811468_36812539_36812657_36813899_36813987_36815958_36816049_36817011_36817063_36818153_36818300_36819218_36819315_36820045
ENSMUSG00000021806.5_0	chr14	+	4857	21	FSM	ENSMUSG00000021806.5	ENSMUST00000022340.5	4876	21	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTTCTTGTGGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	19801343	19861847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_19801634_19802308_19802618_19813733_19813967_19818277_19819006_19828063_19828214_19828805_19829052_19829604_19829806_19831202_19831434_19839738_19839883_19840345_19840475_19841575_19841720_19847231_19847352_19848464_19848714_19852405_19852628_19853116_19853287_19855365_19855496_19855910_19856083_19857994_19858153_19860047_19860172_19861021_19861135_19861253
ENSMUSG00000021807.7_0	chr14	-	1544	8	FSM	ENSMUSG00000021807.7	ENSMUST00000022341.7	1562	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTCACAAAATATACTT	NA	NA	NA	NA	NA	NA	NA	NA	19873881	19861425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_19862306_19862416_19862466_19864604_19864674_19866252_19866342_19867128_19867216_19869974_19870075_19872633_19872759_19873736
ENSMUSG00000021809.11_1	chr14	+	2491	9	FSM	ENSMUSG00000021809.11	ENSMUST00000022343.6	2494	9	2	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGACTCTTTTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20344791	20367645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20344861_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538_20361694_20366091
ENSMUSG00000021809.11_11	chr14	+	592	5	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	-5	1835	-5	-8	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGGTGAGGCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	20350655	20359857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739
ENSMUSG00000021809.11_12	chr14	+	856	7	ISM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	5865	9	-4	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGAGGTAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20350656	20361683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ENSMUSG00000021809.11_15	chr14	+	732	6	FSM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGAGGTAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20350668	20361683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20361538
ENSMUSG00000021809.11_18	chr14	+	651	5	ISM	ENSMUSG00000021809.11	ENST00000372997.3	749	6	3359	12	3359	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGACACACAGAGGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	20354019	20361680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20361538
ENSMUSG00000021809.11_2	chr14	+	662	6	FSM	ENSMUSG00000021809.11	ENST00000349051.9	674	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACAGGTGAGGCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	20344795	20359857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20344865_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739
ENSMUSG00000021809.11_3	chr14	+	930	8	FSM	ENSMUSG00000021809.11	ENST00000357321.9	940	8	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGAGGTAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20344792	20361683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20344865_20350654_20350748_20354020_20354161_20356299_20356435_20357760_20357868_20359739_20359866_20360689_20360802_20361538
ENSMUSG00000021810.4_0	chr14	-	3116	14	FSM	ENSMUSG00000021810.4	ENSMUST00000022344.4	3132	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTAGACTTTTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	20398180	20369926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20371020_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678_20396890_20397861
ENSMUSG00000021810.4_6	chr14	-	1919	13	FSM	ENSMUSG00000021810.4	ENST00000430082.6	1932	13	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGTGAAGGACTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20396836	20370800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379109_20380017_20380108_20383396_20383526_20386136_20386266_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021810.4_9	chr14	-	1734	12	FSM	ENSMUSG00000021810.4	ENST00000454759.6	1748	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGTGAAGGACTAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20396835	20370800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20371014_20374440_20374650_20377291_20377360_20378670_20378858_20378950_20379058_20380021_20380108_20383396_20383526_20386949_20387143_20388196_20388376_20388476_20388565_20393323_20393442_20396678
ENSMUSG00000021811.8_0	chr14	-	1613	5	FSM	ENSMUSG00000021811.8	ENSMUST00000022345.7	1631	5	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGGATTTTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20438967	20434712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20435547_20435867_20435955_20438024_20438280_20438367_20438509_20438671
ENSMUSG00000021814.18_0	chr14	-	2834	13	FSM	ENSMUSG00000021814.18	ENSMUST00000065504.17	2851	13	10	7	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGAGTAATTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	20530191	20505334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_1	chr14	-	2889	14	FSM	ENSMUSG00000021814.18	ENSMUST00000100844.6	2904	14	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAGAGTAATTTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	20530180	20505334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517525_20517592_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529962
ENSMUSG00000021814.18_5	chr14	-	2708	13	FSM	ENSMUSG00000021814.18	ENSMUST00000224975.2	2727	13	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCACAGCTCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	20529969	20505353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20506670_20508637_20508751_20510226_20510303_20510380_20510552_20512622_20512794_20512974_20513089_20514676_20514772_20514911_20515015_20517938_20518004_20519455_20519558_20521435_20521641_20523342_20523398_20529847
ENSMUSG00000021815.5_0	chr14	-	1423	7	FSM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACGAGAAGGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20546747	20533119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214_20536340_20537092_20537249_20537511_20537754_20546698
ENSMUSG00000021815.5_1	chr14	-	1367	6	ISM	ENSMUSG00000021815.5	ENST00000299432.7	1436	7	9001	13	9001	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACGAGAAGGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20537746	20533119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_20533310_20533617_20533712_20534702_20535270_20536214_20536340_20537092_20537249_20537511
ENSMUSG00000021816.12_0	chr14	-	3788	14	FSM	ENSMUSG00000021816.12	ENSMUST00000159027.8	3831	14	32	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAATCCATTAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20596609	20549442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUSG00000021816.12_1	chr14	-	3295	14	FSM	ENSMUSG00000021816.12	ENSMUST00000161445.8	3298	14	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTTCAACTTTTGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	20596612	20549935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20551731_20553314_20553345_20558691_20558790_20559483_20559566_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUSG00000021816.12_2	chr14	-	3070	13	FSM	ENSMUSG00000021816.12	ENSMUST00000022355.11	3074	13	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTGTTGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	20596576	20550097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20551731_20558691_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUSG00000021816.12_5	chr14	-	2302	12	FSM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAAAGCATTCCTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	20596498	20557748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727_20581929_20596423
ENSMUSG00000021816.12_6	chr14	-	2233	11	ISM	ENSMUSG00000021816.12	ENSMUST00000161989.2	2322	12	14578	6	14578	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATTCCTGTAATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	20581930	20557744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_20558790_20559483_20559569_20565590_20565669_20570621_20570748_20573647_20573743_20573846_20573925_20574027_20574168_20574424_20574571_20578225_20578338_20581011_20581137_20581727
ENSMUSG00000021819.12_0	chr14	+	6056	26	FSM	ENSMUSG00000021819.12	ENSMUST00000022358.9	6073	26	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTATTTTCTGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20757630	20773681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ENSMUSG00000021819.12_3	chr14	+	5936	26	FSM	ENSMUSG00000021819.12	ENSMUST00000224751.2	5951	26	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTATTTTCTGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20757729	20773681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764936_20766019_20766131_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ENSMUSG00000021819.12_6	chr14	+	5659	27	FSM	ENSMUSG00000021819.12	ENSMUST00000223840.2	5674	27	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTATTTTCTGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	20757925	20773681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20758125_20760704_20760859_20761095_20761191_20761525_20761699_20761858_20761967_20762104_20762187_20762309_20762431_20763043_20763246_20763397_20763574_20763950_20764637_20764738_20764936_20766019_20766152_20766289_20766470_20766566_20766751_20766977_20767077_20767935_20768061_20768494_20768736_20768827_20768987_20769064_20769294_20769447_20769741_20769880_20770105_20771238_20771728_20771937_20772098_20772210_20772388_20772527_20772648_20772895_20773075_20773206
ENSMUSG00000021820.19_0	chr14	-	3830	23	FSM	ENSMUSG00000021820.19	ENST00000423381.6	3847	23	9	8	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20844114	20784950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_13	chr14	-	3586	20	FSM	ENSMUSG00000021820.19	ENSMUST00000080440.14	3604	20	11	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTAAACAGTCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	20844087	20784957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_28	chr14	-	1789	20	FSM	ENSMUSG00000021820.19	ENST00000372765.5	1817	20	7	21	7	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATTTAAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20844063	20786724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_36	chr14	-	2316	22	FSM	ENSMUSG00000021820.19	ENST00000441192.2	2328	22	11	1	-6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTTAAAACAATTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	20844076	20786832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_4	chr14	-	3672	21	FSM	ENSMUSG00000021820.19	ENST00000322635.7	3689	21	9	8	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20844139	20784950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20797886_20797920_20805726_20805771_20807733_20807797_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_5	chr14	-	3771	21	FSM	ENSMUSG00000021820.19	ENST00000322680.7	3787	21	8	8	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20844151	20784950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20791445_20791560_20792772_20792822_20794671_20794717_20795859_20795929_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021820.19_6	chr14	-	3546	19	FSM	ENSMUSG00000021820.19	ENSMUST00000100837.11	3564	19	10	8	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCCATTGTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	20844109	20784950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20786921_20787326_20787572_20788916_20789012_20789394_20789471_20792772_20792822_20794671_20794717_20805726_20805771_20810211_20810255_20810464_20810549_20814213_20814337_20814928_20815024_20815463_20815548_20815979_20816083_20816220_20816294_20820131_20820198_20821074_20821130_20829271_20829332_20842586_20842682_20843968
ENSMUSG00000021822.4_0	chr14	+	2340	11	FSM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGTTTCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	20886729	20893453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20886803_20887116_20887204_20887677_20887709_20887845_20887954_20888580_20888756_20889163_20889256_20889399_20889623_20889842_20889992_20890565_20890707_20891013_20891163_20892341
ENSMUSG00000021822.4_1	chr14	+	2268	10	ISM	ENSMUSG00000021822.4	ENSMUST00000022368.4	2342	11	388	0	388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCTGGTTTCTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	20887115	20893453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20887204_20887677_20887709_20887845_20887954_20888580_20888756_20889163_20889256_20889399_20889623_20889842_20889992_20890565_20890707_20891013_20891163_20892341
ENSMUSG00000021823.11_0	chr14	+	5244	21	FSM	ENSMUSG00000021823.11	ENSMUST00000022369.9	5267	21	13	10	13	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAATAATGCTCTAATT	NA	NA	NA	NA	NA	NA	NA	NA	20979478	21083734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20979757_21017605_21017677_21032641_21032793_21033435_21033545_21035694_21035818_21037025_21037187_21045079_21045171_21045912_21046061_21051198_21051353_21053162_21053339_21057181_21057373_21058928_21059129_21060105_21060235_21064978_21065129_21069347_21069457_21070546_21070850_21072070_21072196_21074173_21074360_21079243_21079448_21079849_21079955_21081654
ENSMUSG00000021824.14_0	chr14	-	6718	9	FSM	ENSMUSG00000021824.14	ENSMUST00000154460.8	6732	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCAATGACTGCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21102505	21081510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_21086772_21087180_21087326_21088045_21088254_21089195_21089330_21090119_21090206_21091020_21091159_21094720_21094893_21095555_21095832_21102207
ENSMUSG00000021830.15_0	chr14	-	5025	21	FSM	ENSMUSG00000021830.15	ENSMUST00000139526.9	5045	21	14	6	-9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTACATATAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	45456868	45370927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45373431_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ENSMUSG00000021830.15_10	chr14	-	3676	4	FSM	ENSMUSG00000021830.15	ENSMUST00000153383.8	3691	4	10	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTCAAAATAAAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	45456849	45445488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45448696_45450742_45450982_45456452_45456507_45456673
ENSMUSG00000021830.15_7	chr14	-	4017	21	FSM	ENSMUSG00000021830.15	ENSMUST00000022377.11	4028	21	8	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAAAGAGGCTGCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	45456843	45371907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45373428_45377874_45378066_45379429_45379591_45382398_45382538_45385285_45385371_45388794_45388932_45389214_45389384_45398790_45398851_45399696_45399841_45400388_45400513_45402803_45402865_45403183_45403351_45406694_45406846_45409970_45410062_45420502_45420625_45442798_45442874_45444185_45444260_45448612_45448696_45450742_45450982_45456452_45456507_45456673
ENSMUSG00000021831.10_0	chr14	-	4394	16	FSM	ENSMUSG00000021831.10	ENSMUST00000022378.9	4418	16	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGAAATATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45556020	45520558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45533428_45533441_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUSG00000021831.10_1	chr14	-	4384	15	NIC	ENSMUSG00000021831.10	novel	4418	16	NA	NA	7	-15	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGAAATATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45556022	45520558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45531967_45531995_45536502_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUSG00000021831.10_15	chr14	-	2210	14	FSM	ENSMUSG00000021831.10	ENST00000395686.8	2224	14	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAGTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45555950	45522668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45523546_45525189_45525324_45525432_45525520_45529818_45529889_45530387_45530635_45531760_45531854_45536467_45536541_45537298_45537420_45539149_45539224_45539305_45539380_45541005_45541045_45542705_45542790_45543968_45544089_45555833
ENSMUSG00000021832.9_0	chr14	+	2214	14	FSM	ENSMUSG00000021832.9	ENSMUST00000022380.9	2234	14	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGACTAACCATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	45567254	45587152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45567390_45568286_45568367_45568443_45568484_45569362_45569416_45572109_45572178_45572373_45572489_45574934_45575023_45578086_45578149_45578229_45578354_45578738_45578801_45580857_45580979_45581103_45581185_45584200_45584273_45586039
ENSMUSG00000021835.16_0	chr14	-	2044	4	FSM	ENSMUSG00000021835.16	ENSMUST00000074077.12	2064	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATAAACTAAGACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	46628115	46620985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_46622170_46623171_46623552_46624612_46624738_46627760
ENSMUSG00000021835.16_2	chr14	-	1609	3	FSM	ENSMUSG00000021835.16	ENSMUST00000100676.3	1633	3	4	20	4	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46628003	46621183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_46622170_46623171_46623552_46627760
ENSMUSG00000021838.18_0	chr14	+	4535	13	FSM	ENSMUSG00000021838.18	ENSMUST00000022386.15	4564	13	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	47120339	47340607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47120626_47121855_47122474_47253733_47254253_47290306_47290571_47301676_47301787_47303844_47303932_47311292_47311606_47314963_47315050_47320953_47321073_47325215_47325418_47326500_47326628_47333547_47333632_47338887
ENSMUSG00000021838.18_1	chr14	+	4143	12	FSM	ENSMUSG00000021838.18	ENSMUST00000100672.11	4165	12	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	47120467	47340607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47120626_47121855_47122474_47253733_47254253_47301676_47301787_47303844_47303932_47311292_47311606_47314963_47315050_47320953_47321073_47325215_47325418_47326500_47326628_47333547_47333632_47338887
ENSMUSG00000021840.18_0	chr14	+	4527	4	FSM	ENSMUSG00000021840.18	ENSMUST00000166743.9	4542	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCATGGTTTCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47535736	47560548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47535863_47546023_47546046_47547871_47548571_47556868
ENSMUSG00000021840.18_1	chr14	+	4531	3	FSM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	47546006	47560661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47546046_47547871_47548571_47556868
ENSMUSG00000021840.18_2	chr14	+	4478	2	ISM	ENSMUSG00000021840.18	ENSMUST00000164235.3	4531	3	1879	0	1879	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTGTTTGCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	47547885	47560661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_47548571_47556868
ENSMUSG00000021843.18_0	chr14	+	7925	43	FSM	ENSMUSG00000021843.18	ENSMUST00000187839.8	7945	43	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTAGATTTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	47885918	47977345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47886035_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47963927_47964012_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUSG00000021843.18_19	chr14	+	4421	41	FSM	ENSMUSG00000021843.18	ENSMUST00000190252.7	4436	41	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTCAACATGACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	47886775	47974007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47886897_47901212_47901773_47904752_47904891_47907581_47907756_47910396_47910528_47912206_47912324_47914141_47914283_47920839_47920947_47922177_47922311_47923712_47923801_47927405_47927573_47928365_47928435_47929895_47929934_47930860_47930952_47931331_47931401_47932066_47932105_47932219_47932302_47932959_47933029_47938076_47938112_47938525_47938617_47939131_47939201_47940585_47940624_47941643_47941735_47941876_47941946_47943219_47943258_47943864_47943956_47944698_47944737_47946258_47946350_47948298_47948359_47949930_47949966_47952088_47952180_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971722_47973556
ENSMUSG00000021843.18_68	chr14	+	1430	12	FSM	ENSMUSG00000021843.18	ENST00000555573.5	1451	12	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATAATCAGCAAATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	47952065	47973979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47952180_47954330_47954418_47957652_47957743_47961426_47961508_47962108_47962199_47962334_47962428_47963385_47963458_47963682_47963767_47967796_47967881_47970683_47970780_47971611_47971728_47973556
ENSMUSG00000021846.10_0	chr14	+	5883	6	FSM	ENSMUSG00000021846.10	ENSMUST00000073150.6	5900	6	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGAAACTCTATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	48358286	48498335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_48358691_48405653_48405784_48477666_48477769_48487966_48488162_48490033_48490223_48493472
ENSMUSG00000021848.17_0	chr14	-	1841	5	FSM	ENSMUSG00000021848.17	ENST00000672125.1	1859	5	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATGTATAATTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	48904879	48895170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_48896310_48896672_48896784_48898755_48898908_48899900_48900117_48904656
ENSMUSG00000021848.17_3	chr14	-	712	4	FSM	ENSMUSG00000021848.17	ENST00000554559.5	724	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTACTTTGGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	48904980	48896457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_48896784_48899900_48900117_48904656_48904731_48904884
ENSMUSG00000021866.16_0	chr14	+	2383	15	FSM	ENSMUSG00000021866.16	ENSMUST00000022416.15	2394	15	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTTTCTGGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	25842583	25887221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_25842720_25869287_25869351_25870492_25870606_25872935_25873323_25874367_25874456_25874633_25874729_25875094_25875209_25877084_25877176_25877532_25877613_25877774_25877832_25879507_25879602_25883339_25883436_25884350_25884410_25884565_25884689_25886434
ENSMUSG00000021868.8_0	chr14	+	1538	6	FSM	ENSMUSG00000021868.8	ENSMUST00000022419.7	1549	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAATGGCTGTCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25694598	25700886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_25694848_25695896_25695928_25696427_25696517_25697996_25698094_25698689_25698766_25699890
ENSMUSG00000021870.18_0	chr14	-	5530	25	FSM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGTCATCCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	26256036	26134281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ENSMUSG00000021870.18_1	chr14	-	5483	24	ISM	ENSMUSG00000021870.18	ENST00000671191.1	5530	25	270	0	270	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCAGTCATCCTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	26255766	26134281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26180564_26180616_26181058_26181110_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_13	chr14	-	4357	21	FSM	ENSMUSG00000021870.18	ENST00000295952.7	4366	21	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	26254878	26134327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021870.18_14	chr14	-	5358	22	FSM	ENSMUSG00000021870.18	ENST00000295951.7	5368	22	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATGTTTGAGTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	26256102	26134327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26136144_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174756_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482_26255780_26256002
ENSMUSG00000021870.18_30	chr14	-	4583	20	FSM	ENSMUSG00000021870.18	ENST00000428312.6	4606	20	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCTGGAGTACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	26255281	26134408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26136144_26137357_26137448_26139267_26139403_26143575_26143748_26147719_26147838_26148389_26148711_26149396_26149472_26159833_26159894_26160102_26160184_26163729_26163790_26181196_26181366_26183415_26183554_26184730_26184872_26186355_26186428_26186722_26186819_26189637_26189701_26191518_26191556_26195053_26195127_26203973_26204122_26254482
ENSMUSG00000021876.16_0	chr14	+	1500	2	FSM	ENSMUSG00000021876.16	ENSMUST00000022428.13	1518	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCTGTGTCGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	51328546	51343599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51328711_51342263
ENSMUSG00000021876.16_2	chr14	+	547	2	FSM	ENSMUSG00000072115.12	ENST00000553909.1	562	2	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGCTGTCCTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	51338856	51342720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51338947_51342263
ENSMUSG00000021876.16_3	chr14	+	458	1	NIC	ENSMUSG00000021876.16	novel	1518	2	NA	NA	8445	-886	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGATGCTGTCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	51342260	51342718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_51342300_51342700
ENSMUSG00000021877.13_0	chr14	+	2155	6	FSM	ENSMUSG00000021877.13	ENSMUST00000022429.9	2165	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	26359238	26378413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_26359642_26367813_26367895_26368068_26368179_26374260_26374333_26374991_26375118_26377050
ENSMUSG00000021879.14_0	chr14	+	9314	56	FSM	ENSMUSG00000021879.14	ENST00000351747.6	9330	56	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAGAAAATGTCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	26414568	26613599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_26414771_26417104_26417187_26417520_26417548_26418392_26418583_26427176_26427250_26427917_26428077_26428281_26428478_26430290_26430480_26431269_26431427_26432132_26432225_26437707_26437887_26439063_26439200_26443242_26443369_26444651_26444787_26445009_26445204_26445545_26445763_26455664_26455814_26456770_26456972_26460311_26460507_26488028_26488151_26488246_26488530_26491902_26492023_26492317_26492475_26492853_26493027_26494489_26494643_26494882_26495123_26495552_26495799_26496174_26496295_26500758_26500869_26503302_26503487_26503622_26503764_26507216_26507301_26507814_26507980_26517972_26518317_26520744_26520897_26521902_26522042_26523365_26523533_26534525_26534782_26536361_26536662_26537328_26537508_26538098_26538331_26583639_26583781_26586982_26587142_26590730_26590876_26593675_26593827_26594178_26594433_26594614_26594756_26597166_26597305_26598725_26598960_26599857_26600047_26601628_26601733_26606009_26606215_26607862_26608001_26608744_26608831_26610981_26611054_26613408
ENSMUSG00000021884.19_1	chr14	-	2636	17	FSM	ENSMUSG00000021884.19	ENSMUST00000022437.16	2644	17	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATTTTCCCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	31362914	31329156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31330001_31332058_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31354852_31354926_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUSG00000021884.19_3	chr14	-	1664	15	FSM	ENSMUSG00000021884.19	ENST00000628377.2	1677	15	10	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGTTCCGTTGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	31362861	31332060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31342959_31343066_31344795_31344932_31348296_31348410_31351989_31352085_31352917_31352996_31356155_31356237_31357700_31357742_31362450_31362556_31362745
ENSMUSG00000021890.7_0	chr14	+	4903	6	FSM	ENSMUSG00000021890.7	ENSMUST00000022446.7	4918	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACCATTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31216363	31231808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31217329_31219665_31219761_31222076_31222214_31224219_31224411_31226243_31226478_31228527
ENSMUSG00000021891.9_0	chr14	-	2721	6	FSM	ENSMUSG00000021891.9	ENSMUST00000227777.2	2762	6	37	4	37	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACGAAAATAATTAGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	31216928	31195538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31197374_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021891.9_2	chr14	-	3926	6	FSM	ENSMUSG00000021891.9	ENSMUST00000055303.5	3946	6	8	12	-2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAATTAAACCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31216989	31198788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021891.9_8	chr14	-	1002	5	FSM	ENSMUSG00000021891.9	ENSMUST00000227595.2	1027	5	25	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCATGTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	31216953	31201541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31201768_31204747_31204890_31209527_31209699_31215553_31215922_31216858
ENSMUSG00000021891.9_9	chr14	-	2361	5	FSM	ENSMUSG00000021891.9	ENSMUST00000228727.2	2388	5	24	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGAGACCTCTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	31216963	31203307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31204890_31209527_31209699_31214278_31214414_31215553_31215922_31216858
ENSMUSG00000021892.15_0	chr14	-	2671	9	FSM	ENSMUSG00000021892.15	ENSMUST00000091903.5	2684	9	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAAGTCCACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31158009	31095741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31156039_31156103_31157767
ENSMUSG00000021892.15_1	chr14	-	2616	8	FSM	ENSMUSG00000021892.15	ENSMUST00000100730.10	2633	8	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAAAGTCCACTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31139617	31095741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31097159_31097560_31097822_31099347_31099568_31100234_31100278_31101345_31101477_31109675_31109841_31133497_31133627_31139367
ENSMUSG00000021893.15_0	chr14	+	3629	21	FSM	ENSMUSG00000021893.15	ENSMUST00000022451.14	3648	21	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAACTATGTAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	31058606	31093934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31058941_31061991_31062101_31066398_31066557_31067415_31067484_31069614_31069816_31071755_31071843_31074323_31074451_31076051_31076138_31077221_31077316_31080562_31080710_31081163_31081271_31082081_31082203_31085435_31085581_31086404_31086505_31087412_31087549_31088124_31088201_31090012_31090159_31091154_31091218_31091677_31091809_31092658_31092752_31092834
ENSMUSG00000021895.11_0	chr14	+	3563	11	FSM	ENSMUSG00000021895.11	ENSMUST00000049206.6	3585	11	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTAAAAACACCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	26960012	27125856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_26960111_26987479_26987543_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUSG00000021895.11_2	chr14	+	3605	10	FSM	ENSMUSG00000021895.11	ENSMUST00000224981.2	3618	10	3	10	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAACACCTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	27058025	27125858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_27058227_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUSG00000021895.11_3	chr14	+	2147	10	FSM	ENSMUSG00000021895.11	ENST00000497267.5	2167	10	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTGACCGTGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	27083209	27124160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_27083651_27084746_27084855_27101547_27101719_27106110_27106174_27107801_27107899_27108049_27108127_27115889_27116148_27119519_27119691_27122221_27122409_27123586
ENSMUSG00000021900.11_0	chr14	+	2309	4	FSM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATGAGTAAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	31363017	31390525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31363093_31384026_31384283_31387838_31387989_31388697
ENSMUSG00000021900.11_3	chr14	+	952	3	FSM	ENSMUSG00000021900.11	ENST00000673467.1	971	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATACAGCTCACGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31384032	31421974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31384283_31387838_31387989_31421422
ENSMUSG00000021900.11_6	chr14	+	2233	3	ISM	ENSMUSG00000021900.11	ENSMUST00000090147.7	2324	4	21014	11	4	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATGAGTAAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	31384027	31390525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_31384283_31387838_31387989_31388697
ENSMUSG00000021901.11_0	chr14	+	3444	17	FSM	ENSMUSG00000021901.11	ENSMUST00000022458.11	3460	17	15	1	15	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGAGGTCGGTAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30973421	30981900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30973612_30973706_30973737_30973856_30973912_30974884_30975018_30975412_30975533_30975989_30976052_30976123_30976267_30976517_30976597_30977042_30977167_30977469_30977618_30978067_30978253_30978617_30978749_30979245_30979725_30979837_30979999_30980240_30980334_30980414_30980488_30980662
ENSMUSG00000021902.8_0	chr14	-	1963	10	FSM	ENSMUSG00000021902.8	ENSMUST00000226565.2	1971	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTGAATTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30973264	30959645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30960111_30960293_30960440_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_2	chr14	-	2076	11	FSM	ENSMUSG00000021902.8	ENSMUST00000022459.5	2084	11	7	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGGTCTCCTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30973267	30959652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30960111_30960293_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021902.8_5	chr14	-	1746	11	FSM	ENSMUSG00000021902.8	ENST00000327906.8	1761	11	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	2438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCAGGGCGGTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	30973205	30959896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30960111_30960317_30960440_30961076_30961194_30961587_30961695_30962230_30962391_30962815_30962941_30963682_30963785_30969999_30970092_30970951_30971005_30971564_30971675_30972661
ENSMUSG00000021904.7_0	chr14	+	2608	15	FSM	ENSMUSG00000021904.7	ENST00000231721.7	2625	15	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATATTGTCAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	30942525	30950555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30942677_30942786_30942850_30943077_30943198_30943477_30943569_30943671_30943789_30943950_30944097_30944292_30944408_30944515_30944586_30944876_30945022_30945245_30945478_30945566_30945659_30946576_30946619_30947875_30948115_30948348_30948477_30949698
ENSMUSG00000021905.15_0	chr14	-	2935	3	FSM	ENSMUSG00000021905.15	ENSMUST00000067955.12	2953	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACATGCAAATTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	31807557	31802534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31805204_31806863_31806939_31807366
ENSMUSG00000021905.15_1	chr14	-	808	2	FSM	ENSMUSG00000021905.15	ENSMUST00000124303.9	809	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCAGGAGTCCCAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	31807685	31804714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31805204_31807366
ENSMUSG00000021906.15_0	chr14	+	2361	8	FSM	ENSMUSG00000021906.15	ENSMUST00000022462.14	2376	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGTCTTCATGTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	31807378	31825153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31808011_31813592_31813717_31814024_31814089_31817321_31817429_31818443_31818586_31821345_31821589_31822942_31823052_31824213
ENSMUSG00000021908.11_0	chr12	+	3333	1	FSM	ENSMUSG00000021908.11	ENSMUST00000022467.11	1878	1	-45	-1410	-45	1410	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATGGACAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119224667	119228000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_119224700_119228000
ENSMUSG00000021910.16_1	chr14	-	4975	17	FSM	ENSMUSG00000021910.16	ENSMUST00000168206.8	4990	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACATGAGTCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30913478	30892892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341
ENSMUSG00000021910.16_12	chr14	-	2376	11	FSM	ENSMUSG00000021910.16	ENSMUST00000165981.8	2415	11	15	24	15	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	30928642	30907670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_2	chr14	-	5539	21	FSM	ENSMUSG00000021910.16	ENSMUST00000022469.13	5559	21	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAACATGAGTCTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	30928744	30892892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30894136_30894393_30894556_30895020_30895150_30895543_30895701_30896212_30896844_30898286_30899670_30901792_30901843_30902778_30902907_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021910.16_8	chr14	-	2768	14	FSM	ENSMUSG00000021910.16	ENSMUST00000172142.8	2780	14	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCACATCTTTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30928771	30905269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30906355_30906898_30907008_30907268_30907383_30908715_30908845_30909015_30909202_30909606_30909676_30910595_30910752_30911687_30911784_30912952_30913049_30913341_30913506_30914537_30914587_30925183_30925367_30926398_30926483_30928523
ENSMUSG00000021911.17_0	chr14	+	2992	9	FSM	ENSMUSG00000021911.17	ENSMUST00000164137.8	3013	9	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGACAAATAAATGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	31923916	31965042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145
ENSMUSG00000021911.17_1	chr14	+	4397	18	FSM	ENSMUSG00000021911.17	ENSMUST00000022470.15	4413	18	6	10	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACAAAGCTTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	31923911	32019497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31924423_31930113_31930181_31930668_31931632_31932411_31932596_31936280_31936404_31936523_31936608_31939616_31939692_31960487_31960581_31964145_31964304_31971973_31972054_31976492_31976554_31980034_31980111_31984640_31984789_31993586_31993666_31996806_31996916_32006055_32006162_32017155_32017285_32018146
ENSMUSG00000021913.9_0	chr14	+	2851	21	FSM	ENSMUSG00000021913.9	ENST00000419399.4	2864	21	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGATCTTCTGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	32047760	32069584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32047956_32054137_32054241_32054442_32054559_32054704_32054860_32055666_32055814_32057291_32057383_32059398_32059579_32059711_32059841_32061163_32061344_32061859_32062013_32062601_32062705_32063158_32063288_32063996_32064148_32065159_32065288_32066280_32066460_32066670_32066743_32066839_32066966_32067066_32067140_32068354_32068519_32068655_32068811_32069462
ENSMUSG00000021916.17_0	chr14	+	1493	10	FSM	ENSMUSG00000021916.17	ENSMUST00000168584.9	1498	10	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	30723356	30733942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30723386_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_11	chr14	+	1461	9	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	5012	6	5012	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	30728418	30733942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_15	chr14	+	1411	8	ISM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	5182	6	5182	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	30728588	30733942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021916.17_6	chr14	+	2004	10	FSM	ENSMUSG00000021916.17	ENSMUST00000022476.9	2018	10	8	6	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGACCTATTTGCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	30723414	30733942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30723955_30728415_30728470_30728589_30728689_30730610_30730825_30731691_30731810_30732037_30732123_30732253_30732367_30732820_30732988_30733077_30733191_30733441
ENSMUSG00000021917.17_0	chr14	-	919	4	FSM	ENSMUSG00000021917.17	ENSMUST00000226782.2	949	4	22	8	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTACTACATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30723544	30721790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30722180_30722634_30722722_30722800_30722861_30723161
ENSMUSG00000021917.17_2	chr14	-	992	4	FSM	ENSMUSG00000021917.17	ENSMUST00000228767.2	1008	4	6	10	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTGTACTACATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	30723623	30721792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30722180_30722634_30722718_30722800_30722861_30723161
ENSMUSG00000021918.11_0	chr14	+	4050	14	FSM	ENSMUSG00000021918.11	ENSMUST00000226551.2	4098	14	39	9	39	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTATGATTAATTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30673372	30710766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUSG00000021918.11_1	chr14	+	4229	15	FSM	ENSMUSG00000021918.11	ENSMUST00000228328.2	4245	15	8	8	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTAATTTTGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	30673341	30710770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30673676_30675759_30676027_30678837_30679036_30679218_30679327_30681097_30681253_30685889_30686032_30692119_30692522_30696171_30696316_30697179_30697330_30697717_30697785_30699402_30699537_30701946_30702036_30704270_30704474_30706300_30706435_30709068
ENSMUSG00000021928.10_0	chr14	-	10083	4	FSM	ENSMUSG00000021928.10	ENSMUST00000022494.10	10092	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTGCCTGTGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	61597880	61569191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597668
ENSMUSG00000021928.10_1	chr14	-	335	2	FSM	ENSMUSG00000021928.10	ENST00000378270.5	357	2	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTGAAGAAGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	61597817	61578667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61578854_61597668
ENSMUSG00000021928.10_2	chr14	-	628	4	FSM	ENSMUSG00000021928.10	ENST00000378284.6	647	4	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTGAAGAAGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	61597820	61578667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61578854_61579455_61579676_61584820_61584891_61597668
ENSMUSG00000021928.10_3	chr14	-	480	4	FSM	ENSMUSG00000021928.10	ENST00000569153.1	501	4	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTGAAGAAGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	61597749	61578667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61578854_61579536_61579676_61584820_61584891_61597664
ENSMUSG00000021928.10_4	chr14	-	404	3	FSM	ENSMUSG00000021928.10	ENST00000378272.9	427	3	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACTGAAGAAGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	61597816	61578667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61578854_61584820_61584891_61597668
ENSMUSG00000021929.10_0	chr14	-	4050	17	FSM	ENSMUSG00000021929.10	ENSMUST00000022496.9	4069	17	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATGATAAAACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	61677313	61602668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61605179_61605576_61605672_61607831_61607995_61608150_61608223_61608319_61608425_61610406_61610536_61611732_61611865_61620683_61620729_61622036_61622207_61622551_61622639_61624872_61624959_61628612_61628709_61628847_61628901_61628996_61629027_61629204_61629295_61640446_61640492_61677171
ENSMUSG00000021930.15_0	chr14	-	3991	5	FSM	ENSMUSG00000021930.15	ENSMUST00000022497.15	4002	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTACCTTACTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	61794324	61769441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61787192_61787310_61793969
ENSMUSG00000021930.15_3	chr14	-	963	4	FSM	ENSMUSG00000021930.15	ENST00000378195.6	973	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTATCCCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61794069	61772097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61772691_61777585_61777689_61783130_61783298_61793969
ENSMUSG00000021930.15_4	chr14	-	864	3	ISM	ENSMUSG00000021930.15	ENST00000378195.6	973	4	10781	0	10781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGTATCCCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	61783298	61772097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_61772691_61777585_61777689_61783130
ENSMUSG00000021932.14_0	chr14	+	1479	11	FSM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTTTAATCATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62569524	62610434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_62569626_62584016_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021932.14_3	chr14	+	1381	10	ISM	ENSMUSG00000021932.14	ENSMUST00000022499.13	1494	11	14497	7	14497	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTTTAATCATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62584013	62610434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_62584092_62585969_62586078_62587848_62587926_62590971_62591087_62597911_62597977_62598777_62598884_62601478_62601561_62602707_62602751_62607920_62608002_62609808
ENSMUSG00000021936.15_0	chr14	-	5749	12	FSM	ENSMUSG00000021936.15	ENSMUST00000111945.9	5756	12	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGTAAGAGTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33169114	33099860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_33104282_33105830_33105909_33108518_33108583_33109128_33109254_33110756_33110940_33112629_33112702_33114898_33115065_33124580_33124720_33124821_33124881_33130004_33130135_33132812_33132982_33168971
ENSMUSG00000021938.13_0	chr14	-	4091	9	FSM	ENSMUSG00000021938.13	ENSMUST00000022507.13	4114	9	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAATTTTATAATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	57015759	56958175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56960738_56962762_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ENSMUSG00000021938.13_3	chr14	-	2849	8	FSM	ENSMUSG00000021938.13	ENSMUST00000163924.2	2863	8	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTTCTTAAAACATACT	NA	NA	NA	NA	NA	NA	NA	NA	57015769	56961452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56962933_56965976_56966035_56986291_56986401_56996086_56996172_56999290_56999488_57001605_57001702_57009161_57009464_57015247
ENSMUSG00000021939.9_0	chr14	+	4723	10	FSM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATATAGAACTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63359918	63383360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63360015_63370764_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_10	chr14	+	4628	9	ISM	ENSMUSG00000021939.9	ENSMUST00000006235.9	4743	10	10853	12	-2321	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATATAGAACTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	63370763	63383360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_63370916_63371413_63371500_63373056_63373172_63373855_63373975_63375481_63375568_63375799_63375944_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021939.9_14	chr14	+	629	6	FSM	ENSMUSG00000021939.9	ENST00000524500.6	641	6	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGCTTTGACTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	63373089	63379776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63373172_63373855_63373975_63375481_63375568_63376447_63376565_63379182_63379312_63379680
ENSMUSG00000021940.11_0	chr14	+	1275	9	FSM	ENSMUSG00000021940.11	ENST00000506080.5	1283	9	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33326909	33361132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33327042_33334252_33334351_33336389_33336503_33344438_33344588_33346855_33346947_33352863_33353199_33354862_33355079_33360276_33360340_33361054
ENSMUSG00000021940.11_16	chr14	+	485	4	FSM	ENSMUSG00000021940.11	ENST00000513156.5	493	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGTCCCTCGAGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	33344459	33361132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33344588_33354862_33355079_33360276_33360340_33361054
ENSMUSG00000021944.16_0	chr14	-	3400	7	FSM	ENSMUSG00000021944.16	ENSMUST00000067417.10	3400	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCCGAAGTCTTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	63482720	63436370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_63438001_63438926_63439082_63440759_63440848_63441107_63441234_63442037_63442208_63477984_63479095_63482599
ENSMUSG00000021945.10_1	chr14	+	4980	25	FSM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	2	8	2	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTAAGTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57124098	57198044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_57124156_57125251_57125354_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_103	chr14	+	6964	24	FSM	ENSMUSG00000021945.10	ENSMUST00000022511.10	6974	24	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTACTAAACATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	57125275	57200148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_57125315_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021945.10_63	chr14	+	1173	6	FSM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGGTTTGTACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57124180	57150568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_57124252_57125251_57125315_57140152_57140655_57140915_57141010_57148534_57148818_57150408
ENSMUSG00000021945.10_69	chr14	+	1100	5	ISM	ENSMUSG00000021945.10	ENST00000382905.8	1185	6	1081	4	-18	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTGTACTTCTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	57125257	57150572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_57125315_57140152_57140655_57140915_57141010_57148534_57148818_57150408
ENSMUSG00000021945.10_71	chr14	+	4916	24	ISM	ENSMUSG00000021945.10	ENST00000382871.3	4990	25	1162	8	-17	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTAAGTAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57125258	57198044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_57125354_57140152_57141010_57148534_57148818_57150408_57150575_57151412_57151626_57156727_57156800_57158043_57158195_57158958_57159075_57163297_57163415_57165643_57165795_57169545_57169719_57174966_57175133_57175861_57175897_57179454_57179585_57180709_57180826_57181522_57181695_57183947_57184074_57185403_57185499_57186966_57187136_57187633_57187786_57193636_57193752_57194308_57194561_57195638_57195760_57197171
ENSMUSG00000021947.12_0	chr14	-	1480	8	FSM	ENSMUSG00000021947.12	ENSMUST00000022517.9	1497	8	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCATGAGGACAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	57635977	57512457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57513020_57513373_57513481_57523821_57523928_57541049_57541245_57550424_57550587_57600378_57600506_57620214_57620323_57635864
ENSMUSG00000021948.18_0	chr14	-	2764	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112210.11	2777	18	8	5	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTGGCTGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30348159	30317315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324693_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUSG00000021948.18_2	chr14	-	2836	18	FSM	ENSMUSG00000021948.18	ENSMUST00000112211.9	2851	18	12	3	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACCTGGCTGTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30348153	30317315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30317983_30320674_30320804_30321274_30321464_30321566_30321706_30323125_30323189_30323716_30323809_30323989_30324164_30324270_30324372_30324615_30324785_30326063_30326165_30327396_30327527_30327772_30327859_30329119_30329152_30329244_30329408_30329564_30329626_30331058_30331259_30332144_30332268_30347936
ENSMUSG00000021950.16_0	chr14	+	1862	12	FSM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCAAAAAGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33807944	33822517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUSG00000021950.16_1	chr14	+	804	9	FSM	ENSMUSG00000021950.16	ENST00000611655.1	814	9	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACAGGTTCTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	33807963	33819938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33808034_33811467_33811559_33812563_33812659_33813757_33813872_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_2	chr14	+	788	9	FSM	ENSMUSG00000021950.16	ENST00000613703.4	799	9	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACAGGTTCTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	33807964	33819938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33808034_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021950.16_7	chr14	+	1774	11	ISM	ENSMUSG00000021950.16	ENSMUST00000022519.15	1880	12	3529	11	3485	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCAAAAAGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33811466	33822517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_33811559_33812563_33812659_33813757_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813_33819937_33821647
ENSMUSG00000021950.16_8	chr14	+	716	8	ISM	ENSMUSG00000021950.16	ENST00000613703.4	799	9	5800	7	5779	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACAGGTTCTCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	33813760	33819938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_33813872_33814486_33814578_33815334_33815415_33815840_33815901_33816354_33816449_33816679_33816776_33818486_33818546_33819813
ENSMUSG00000021951.8_0	chr14	-	850	5	FSM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	-19	5	-19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATTCTGTCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57809045	57787059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378_57803542_57808999
ENSMUSG00000021951.8_1	chr14	-	799	4	ISM	ENSMUSG00000021951.8	ENSMUST00000022518.8	836	5	5490	5	5490	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATTCTGTCATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	57803536	57787059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_57787337_57787818_57788100_57795490_57795574_57803378
ENSMUSG00000021952.17_0	chr14	-	8664	23	FSM	ENSMUSG00000021952.17	ENSMUST00000174545.9	8680	23	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACATTTTTGGTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	57902876	57814982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57819926_57822056_57822150_57823323_57823442_57824036_57824168_57825409_57825529_57827397_57827579_57828242_57828537_57831284_57831460_57834431_57834602_57835342_57835503_57839945_57840124_57841042_57841189_57841820_57841964_57842579_57842757_57850729_57850905_57851143_57851302_57855587_57855701_57866813_57866968_57867672_57867790_57875675_57875815_57880538_57880681_57885875_57885982_57902344
ENSMUSG00000021953.15_0	chr14	-	874	6	FSM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGCAGGGCGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	63735091	63730130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_63730296_63731190_63731461_63733168_63733342_63733438_63733589_63734393_63734465_63735046
ENSMUSG00000021953.15_1	chr14	-	820	5	ISM	ENSMUSG00000021953.15	ENST00000525246.5	874	6	636	0	636	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTGCAGGGCGCACGGC	NA	NA	NA	NA	NA	NA	NA	NA	63734455	63730130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_63730296_63731190_63731461_63733168_63733342_63733438_63733589_63734393
ENSMUSG00000021957.8_0	chr14	+	3209	14	FSM	ENSMUSG00000021957.8	ENSMUST00000022529.8	3223	14	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTCAATTACTGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	30271097	30296673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30271338_30280677_30280796_30281708_30281823_30282543_30282642_30287444_30287637_30288898_30289018_30290120_30290315_30290931_30291097_30291912_30292070_30292159_30292291_30292919_30293004_30293108_30293203_30294164_30294288_30295293
ENSMUSG00000021958.6_0	chr14	+	1291	7	FSM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	64097814	64157302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_64097897_64101664_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ENSMUSG00000021958.6_1	chr14	+	1209	6	ISM	ENSMUSG00000021958.6	ENSMUST00000022528.6	1295	7	3852	2	3852	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGCTGAGCCTTTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	64101664	64157302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_64101775_64103551_64103645_64105967_64106047_64109750_64109844_64115560_64115638_64156545
ENSMUSG00000021959.17_0	chr14	-	5174	8	FSM	ENSMUSG00000021959.17	ENSMUST00000022531.14	5191	8	9	8	-9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTAGTCTCTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	57983571	57927126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57929228_57931770_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ENSMUSG00000021959.17_3	chr14	-	3825	7	FSM	ENSMUSG00000021959.17	ENSMUST00000173990.8	3834	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	57983553	57931000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57931878_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ENSMUSG00000021962.10_0	chr14	+	5555	10	FSM	ENSMUSG00000021962.10	ENSMUST00000022535.9	5576	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAAAATTCTAATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30201581	30249012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30234940_30235055_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ENSMUSG00000021962.10_2	chr14	+	1816	9	FSM	ENSMUSG00000021962.10	ENST00000294241.10	1827	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACAAAACAACAAGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	30201641	30245447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30201774_30204149_30204191_30206415_30206544_30224782_30224850_30227502_30227642_30240875_30241635_30243546_30243613_30244684_30244904_30245182
ENSMUSG00000021963.18_0	chr14	+	5090	4	FSM	ENSMUSG00000021963.18	ENSMUST00000128764.9	5125	4	26	9	-12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTATTATCCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	58035662	58044086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_58035812_58035944_58036055_58038950_58039074_58039378
ENSMUSG00000021965.4_0	chr14	-	2241	9	FSM	ENSMUSG00000021965.4	ENSMUST00000022536.3	2260	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCCACCTTTTATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	58063607	58044023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_58044989_58045431_58045536_58047399_58047601_58049036_58049123_58054101_58054209_58057610_58058020_58059492_58059659_58060357_58060420_58063466
ENSMUSG00000021967.5_0	chr14	+	2865	2	FSM	ENSMUSG00000021967.5	ENSMUST00000022538.5	2877	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGAGACTGCTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	58063696	58066747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_58063780_58063965
ENSMUSG00000021967.5_1	chr14	+	2784	1	NIC	ENSMUSG00000021967.5	novel	2877	2	NA	NA	273	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGAGACTGCTGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	58063963	58066747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_58064000_58066700
ENSMUSG00000021969.9_0	chr14	-	5170	13	FSM	ENSMUSG00000021969.9	ENSMUST00000089473.5	5186	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCGCATGGAAATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	58127723	58070165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_58074104_58075047_58075125_58076546_58076663_58078285_58078376_58080644_58080772_58084377_58084520_58094066_58094188_58095084_58095118_58095996_58096067_58102977_58103099_58111349_58111454_58115889_58115917_58127519
ENSMUSG00000021972.15_0	chr14	-	3378	11	FSM	ENSMUSG00000021972.15	ENSMUST00000022544.14	3396	11	11	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAGCAAGGCTGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	65187288	65049055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65050869_65054465_65054586_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ENSMUSG00000021972.15_2	chr14	-	2939	10	FSM	ENSMUSG00000021972.15	ENSMUST00000176128.8	2958	10	12	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACTCAAAATACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	65187308	65059673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65061148_65063049_65063145_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098_65134576_65140687_65140768_65187025
ENSMUSG00000021972.15_5	chr14	-	1672	9	FSM	ENSMUSG00000021972.15	ENST00000524238.3	1687	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCCATCTGTCCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	65134566	65060637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65061148_65062747_65062820_65063049_65063142_65064220_65064317_65066034_65066118_65089333_65089488_65098964_65099076_65125023_65125110_65134098
ENSMUSG00000021973.10_0	chr14	-	2311	12	FSM	ENSMUSG00000021973.10	ENSMUST00000022543.10	2329	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTACTTTGGTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	58236708	58153724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_58154833_58156279_58156438_58156800_58156910_58161396_58161569_58164653_58164752_58169694_58169761_58181044_58181128_58182841_58182890_58191592_58191669_58192455_58192488_58209107_58209247_58236486
ENSMUSG00000021975.10_0	chr14	+	2655	17	FSM	ENSMUSG00000021975.10	ENSMUST00000043914.8	2674	17	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTGCCCAGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	65187506	65277275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_65187817_65217570_65217699_65223751_65223813_65227980_65228044_65230422_65230563_65232430_65232518_65244694_65244816_65245439_65245575_65253978_65254091_65257764_65257946_65263853_65263915_65266334_65266507_65269668_65269794_65271376_65271545_65273846_65273946_65274794_65274933_65276721
ENSMUSG00000021978.10_0	chr14	-	5955	7	FSM	ENSMUSG00000021978.10	ENSMUST00000022550.8	5977	7	18	4	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65335537	65289512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317925_65335445
ENSMUSG00000021978.10_1	chr14	-	5864	6	ISM	ENSMUSG00000021978.10	ENSMUST00000225633.2	6013	7	17629	1	17629	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGTTTGGAGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65317925	65289512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828
ENSMUSG00000021978.10_2	chr14	-	5993	7	FSM	ENSMUSG00000021978.10	ENSMUST00000225633.2	6013	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCATGCAGTTTGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	65335540	65289517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65292272_65294279_65294409_65296433_65296579_65304131_65304260_65313032_65315639_65317828_65317965_65335445
ENSMUSG00000021981.11_0	chr14	+	3025	11	FSM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACCACATACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	59678429	59786340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_59678468_59696542_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_1	chr14	+	2985	10	ISM	ENSMUSG00000021981.11	ENSMUST00000022553.6	3037	11	18120	7	18120	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATACTTTTGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	59696549	59786345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_59696691_59699083_59699152_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_2	chr14	+	1698	9	FSM	ENSMUSG00000021981.11	ENST00000355854.8	1720	9	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAAGCAGTGTAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59716209	59784843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021981.11_3	chr14	+	1579	10	FSM	ENSMUSG00000021981.11	ENST00000610540.4	1601	10	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAAAGCAGTGTAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59716209	59784843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_59716377_59716495_59716634_59734251_59734394_59736992_59737158_59743713_59743833_59757014_59757184_59764204_59764265_59766290_59766357_59776510_59776655_59784434
ENSMUSG00000021982.15_0	chr14	-	3162	11	FSM	ENSMUSG00000021982.15	ENSMUST00000225839.2	3189	11	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACCAAGTTGGCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59835368	59796843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59798371_59801966_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021982.15_2	chr14	-	2226	10	FSM	ENSMUSG00000021982.15	ENSMUST00000167100.9	2243	10	12	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTGAAAAAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	59835396	59797764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59798406_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021982.15_4	chr14	-	2185	10	FSM	ENSMUSG00000021982.15	ENSMUST00000056997.15	2202	10	10	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCACCACAAAACAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	59835383	59801431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59802045_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021982.15_5	chr14	-	1877	10	FSM	ENSMUSG00000021982.15	ENSMUST00000171683.3	1892	10	8	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGGAACAGCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	59835385	59805184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59805488_59806396_59806458_59811095_59811286_59813182_59813353_59818773_59818824_59823487_59824058_59827236_59827415_59829909_59829985_59834310_59834409_59835203
ENSMUSG00000021987.10_0	chr14	+	3801	14	FSM	ENSMUSG00000021987.10	ENSMUST00000022563.9	3813	14	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	60502688	60539819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_60502811_60514577_60514695_60517531_60517695_60519385_60519544_60522365_60522495_60526991_60527127_60529442_60529576_60530366_60530477_60530832_60530959_60533568_60533619_60534022_60534224_60535511_60535644_60536363_60536491_60537721
ENSMUSG00000021990.17_0	chr14	+	1579	9	FSM	ENSMUSG00000021990.17	ENST00000409126.5	1590	9	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGCCTTACCCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	60970554	60998494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_60970656_60983093_60983231_60984162_60984343_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ENSMUSG00000021990.17_1	chr14	+	1479	8	ISM	ENSMUSG00000021990.17	ENST00000409126.5	1590	9	12543	6	12543	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGCCTTACCCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	60983092	60998494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_60983231_60984162_60984343_60987411_60987592_60989083_60989317_60991229_60991360_60993660_60994034_60997031_60997107_60998324
ENSMUSG00000021993.11_0	chr14	+	2993	19	FSM	ENSMUSG00000021993.11	ENSMUST00000063562.9	3015	19	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAAAGTGGTATCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	61022038	61141673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61022320_61024743_61024918_61025602_61025692_61028335_61028423_61033620_61033685_61039569_61039753_61040261_61040419_61046416_61046466_61048547_61048609_61052401_61052455_61064747_61064902_61066835_61066914_61068561_61068767_61071433_61071544_61080656_61080732_61083832_61083953_61109466_61109589_61112682_61112757_61140816
ENSMUSG00000021993.11_11	chr14	+	246	2	ISM	ENSMUSG00000021993.11	ENST00000412105.1	325	3	2505	5	2505	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGGAAAAGTACGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	61024749	61025680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_61024918_61025602
ENSMUSG00000021993.11_7	chr14	+	317	3	FSM	ENSMUSG00000021993.11	ENST00000412105.1	325	3	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTGGAAAAGTACGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	61022247	61025680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61022313_61024743_61024918_61025602
ENSMUSG00000021996.17_0	chr14	+	1976	9	FSM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	6172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATAACTACTACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74969742	74988199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_13	chr14	+	1098	9	FSM	ENSMUSG00000021996.17	ENSMUST00000176957.8	1117	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTCTGGTTTAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	74969835	74987281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_74969962_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_17	chr14	+	1892	8	ISM	ENSMUSG00000021996.17	ENSMUST00000022573.17	1988	9	3661	6	-9	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATAACTACTACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74973397	74988199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983158_74987084
ENSMUSG00000021996.17_2	chr14	+	1980	9	NIC	ENSMUSG00000021996.17	novel	1988	9	NA	NA	6	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTATAACTACTACCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	74969742	74988199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_74969829_74973399_74973475_74975868_74975958_74978596_74978696_74979453_74979579_74980658_74980779_74982087_74982187_74982989_74983162_74987084
ENSMUSG00000021997.5_0	chr14	-	534	4	FSM	ENSMUSG00000021997.5	ENST00000676446.1	555	4	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGAGGGAGACACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	75367015	75344712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_75344862_75358426_75358526_75360375_75360537_75366890
ENSMUSG00000022000.12_0	chr14	+	6139	19	FSM	ENSMUSG00000022000.12	ENSMUST00000022577.6	6151	19	12	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75521824	75581866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_75522106_75529011_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573364_75573515_75574809_75575011_75576748_75576913_75581033
ENSMUSG00000022000.12_3	chr14	+	6121	19	FSM	ENSMUSG00000022000.12	ENSMUST00000227049.2	6144	19	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGTAGATTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	75521848	75581866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_75522106_75529008_75529135_75529617_75529728_75531330_75531443_75543228_75543338_75546348_75546489_75547084_75547243_75553320_75553519_75559036_75559345_75560663_75561315_75561852_75562045_75564983_75565585_75567113_75567218_75567508_75568700_75569145_75569659_75573361_75573515_75574809_75575011_75576748_75576913_75581033
ENSMUSG00000022003.8_0	chr14	-	3568	10	FSM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATATATGATAATATG	NA	NA	NA	NA	NA	NA	NA	NA	76024470	75997569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435_76014567_76024364
ENSMUSG00000022003.8_1	chr14	-	3467	9	ISM	ENSMUSG00000022003.8	ENSMUST00000022580.8	3588	10	9910	9	9910	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGATAATATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	76014567	75997565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_76000131_76000768_76000850_76004342_76004482_76006255_76006381_76007005_76007102_76007610_76007697_76008878_76008974_76012434_76012583_76014435
ENSMUSG00000022008.5_0	chr14	-	5366	8	FSM	ENSMUSG00000022008.5	ENSMUST00000022585.5	5389	8	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGAAGTTGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	76348184	76323682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76328187_76332446_76332546_76335893_76336059_76336499_76336632_76339885_76339992_76343493_76343593_76344760_76344894_76348056
ENSMUSG00000022009.2_0	chr14	+	3953	10	FSM	ENSMUSG00000022009.2	ENSMUST00000022586.2	3974	10	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCAGACTTGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	76348344	76374812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76348767_76349363_76349438_76351614_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225
ENSMUSG00000022009.2_3	chr14	+	961	9	FSM	ENSMUSG00000022009.2	ENST00000379161.5	968	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTTGGGGATACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76351619	76377354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76351714_76352417_76352481_76353223_76353301_76361925_76362019_76363577_76363772_76368252_76368370_76370411_76370639_76372225_76372259_76377291
ENSMUSG00000022010.20_1	chr14	+	2710	2	FSM	ENSMUSG00000022010.20	ENST00000501704.3	2726	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGTCTCAGGGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76653036	76745280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76655198_76744731
ENSMUSG00000022010.20_10	chr14	+	1746	3	FSM	ENSMUSG00000022010.20	ENSMUST00000022587.10	1762	3	11	5	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACGTGTTTCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	76741928	76745200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76742282_76742688_76742738_76743856
ENSMUSG00000022013.5_0	chr14	-	6169	6	FSM	ENSMUSG00000022013.5	ENSMUST00000226459.2	6193	6	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGAATTTACACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	78112351	78058129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_78063911_78077607_78077679_78081835_78081913_78090337_78090412_78094378_78094431_78112237
ENSMUSG00000022015.9_0	chr14	-	2054	4	FSM	ENSMUSG00000022015.9	ENST00000398795.7	2072	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTGCCTGGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78545325	78514893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_78516438_78521678_78521778_78537246_78537440_78545107
ENSMUSG00000022016.18_0	chr14	-	9343	12	FSM	ENSMUSG00000022016.18	ENSMUST00000123853.9	9364	12	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATGTCAAGCCATGG	NA	NA	NA	NA	NA	NA	NA	NA	78774240	78729698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_78733387_78736274_78736436_78739629_78739677_78740378_78740463_78745164_78745321_78747319_78751761_78752246_78752512_78753762_78753898_78755612_78755661_78756219_78756337_78760030_78760143_78774151
ENSMUSG00000022018.8_1	chr14	-	892	5	FSM	ENSMUSG00000022018.8	ENSMUST00000022595.8	918	5	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGAGATCTGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	79539069	79526205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_79526560_79527683_79527747_79529110_79529219_79538154_79538341_79538888
ENSMUSG00000022019.17_0	chr14	+	2635	14	FSM	ENSMUSG00000022019.17	ENSMUST00000168275.9	2657	14	16	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTTGCTCTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87654090	87782934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_87654285_87694469_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080_87749207_87776832_87776958_87782692
ENSMUSG00000022019.17_2	chr14	+	2062	11	FSM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	6	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGTACGTGATCCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87694473	87749202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_87694555_87696196_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ENSMUSG00000022019.17_22	chr14	+	1981	10	ISM	ENSMUSG00000022019.17	ENST00000196169.7	2073	11	1729	5	1727	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGTACGTGATCCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87696196	87749202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718169_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ENSMUSG00000022019.17_9	chr14	+	2061	11	FSM	ENSMUSG00000022019.17	ENST00000621840.4	2072	11	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGTACGTGATCCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	87694475	87749202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_87694555_87696192_87696259_87709511_87709673_87712134_87712277_87714825_87714898_87718172_87718320_87722994_87723136_87723627_87723785_87724597_87724724_87743194_87744043_87749080
ENSMUSG00000022020.16_0	chr14	-	13210	20	FSM	ENSMUSG00000022020.16	ENSMUST00000022597.15	13223	20	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCATCAAGAAGGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	79628211	79562714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_79573372_79573827_79573926_79576973_79577118_79577477_79577577_79578426_79578536_79580565_79580760_79582334_79582549_79588812_79588942_79593160_79593314_79593806_79593977_79596895_79596969_79606517_79606625_79607441_79607538_79612175_79612296_79614807_79614962_79618934_79619070_79620675_79620834_79622093_79622199_79624461_79624547_79628001
ENSMUSG00000022021.15_0	chr14	-	4562	28	FSM	ENSMUSG00000022021.15	ENSMUST00000022599.14	4582	28	17	3	17	-3	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAAGACGTATGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87378643	86892805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_86894019_87009521_87009582_87010042_87010139_87047771_87047908_87066427_87066591_87072410_87072538_87089507_87089638_87103838_87104079_87143372_87143475_87147464_87147560_87156204_87156301_87202877_87202993_87203760_87204070_87206884_87206990_87216049_87216115_87219006_87219126_87222217_87222335_87223055_87223175_87223450_87223562_87237444_87237551_87240237_87240375_87244610_87244681_87244761_87244837_87274891_87275023_87310717_87310823_87328413_87328591_87352449_87352483_87378433
ENSMUSG00000022023.7_0	chr14	-	3688	10	FSM	ENSMUSG00000022023.7	ENSMUST00000022601.7	3704	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGCTAAATCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	79718952	79697384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_79699570_79703622_79703790_79704712_79704904_79707544_79707621_79708126_79708174_79709791_79709966_79714242_79714373_79714481_79714545_79717812_79717886_79718370
ENSMUSG00000022024.11_0	chr14	+	7369	13	FSM	ENSMUSG00000022024.11	ENSMUST00000054908.10	7392	13	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAATAAATGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	79825141	79872624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79825307_79825393_79825452_79832808_79832900_79834187_79834258_79834835_79834907_79840286_79840341_79840909_79840927_79844685_79844718_79846395_79846493_79847679_79847788_79857148_79857240_79862280_79862463_79866291
ENSMUSG00000022031.7_0	chr14	-	2834	15	FSM	ENSMUSG00000022031.7	ENSMUST00000022609.7	2851	15	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAAGAGTCGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	65830516	65767906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830373
ENSMUSG00000022031.7_1	chr14	-	2761	15	FSM	ENSMUSG00000022031.7	ENSMUST00000225355.2	2771	15	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAAGAGTCGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	65830500	65767906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65819563_65819628_65820338_65820410_65823706_65823846_65827954_65828055_65830430
ENSMUSG00000022031.7_7	chr14	-	1486	12	FSM	ENSMUSG00000022031.7	ENST00000537665.2	1506	12	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAGATTCAAGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	65823833	65768935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_65769050_65784582_65784665_65785314_65785543_65786868_65786935_65788833_65788925_65797569_65797764_65800700_65800828_65802760_65802923_65815373_65815529_65818196_65818266_65820338_65820410_65823706
ENSMUSG00000022033.10_0	chr14	+	1699	8	FSM	ENSMUSG00000022033.10	ENSMUST00000022612.10	1720	8	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1917	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGCACCTCAGCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	66043298	66055263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66043584_66046663_66046739_66049379_66049474_66050414_66050558_66051255_66051426_66052620_66052751_66054048_66054226_66054638
ENSMUSG00000022034.11_0	chr14	-	2900	11	FSM	ENSMUSG00000022034.11	ENSMUST00000022613.10	2913	11	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCATTTCATTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	66071437	66056493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66057548_66059029_66059191_66061566_66061708_66062294_66062385_66063928_66064061_66064616_66064738_66065917_66065973_66067110_66067202_66068453_66069244_66070112_66070191_66071250
ENSMUSG00000022035.7_0	chr14	+	2209	9	FSM	ENSMUSG00000022035.7	ENSMUST00000022614.7	2230	9	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGGCATTGATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	66074766	66104051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66089065_66089118_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022035.7_21	chr14	+	492	6	FSM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGGTACGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66074905	66094338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66074934_66077896_66077945_66083744_66083785_66091550_66091627_66093872_66093977_66094142
ENSMUSG00000022035.7_29	chr14	+	462	5	ISM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	2993	8	2993	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGGTACGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66077898	66094338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_66077945_66083744_66083785_66091550_66091627_66093872_66093977_66094142
ENSMUSG00000022035.7_37	chr14	+	660	6	ISM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	8843	0	8838	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGATGAAAAGAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	66083743	66102768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_66083785_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022035.7_43	chr14	+	414	4	ISM	ENSMUSG00000022035.7	ENST00000497982.2	500	6	8841	8	8841	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTAGGTACGCTGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66083746	66094338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_66083785_66091550_66091627_66093872_66093977_66094142
ENSMUSG00000022035.7_48	chr14	+	616	5	ISM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	16653	0	16648	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGATGAAAAGAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	66091553	66102768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022035.7_9	chr14	+	692	7	FSM	ENSMUSG00000022035.7	ENST00000522915.5	692	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGATGAAAAGAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	66074900	66102768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66074934_66083744_66083785_66091550_66091627_66093872_66093977_66094142_66094346_66097618_66097665_66102578
ENSMUSG00000022037.16_0	chr14	+	1803	9	FSM	ENSMUSG00000022037.16	ENSMUST00000022616.14	1810	9	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGTGTCCCTTGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	66205931	66218989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66206138_66209180_66209302_66210773_66210923_66212291_66212463_66213029_66213442_66214354_66214460_66217099_66217330_66218302_66218479_66218756
ENSMUSG00000022039.7_0	chr14	-	695	6	FSM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGCCGTAAGCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66306700	66291237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66291368_66293916_66293999_66295016_66295184_66296197_66296270_66305948_66306118_66306625
ENSMUSG00000022039.7_1	chr14	-	622	5	ISM	ENSMUSG00000022039.7	ENST00000347580.8	707	6	589	4	589	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGCCGTAAGCCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	66306119	66291237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_66291368_66293916_66293999_66295016_66295184_66296197_66296270_66305948
ENSMUSG00000022040.9_0	chr14	-	816	10	FSM	ENSMUSG00000022040.9	ENST00000517536.5	836	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAGAGAAGTAAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	66339690	66322389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66322439_66322744_66322826_66323682_66323753_66324413_66324532_66326954_66327030_66330247_66330360_66332186_66332273_66336236_66336288_66339041_66339121_66339595
ENSMUSG00000022041.11_3	chr14	+	1425	5	FSM	ENSMUSG00000022041.11	ENST00000240132.7	1432	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGGCCTGGACAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	66380825	66388549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66380913_66381369_66381415_66383854_66383965_66386235_66387269_66388399
ENSMUSG00000022041.11_7	chr14	+	1339	4	ISM	ENSMUSG00000022041.11	ENST00000240132.7	1432	5	550	0	550	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGGCCTGGACAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	66381368	66388549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_66381415_66383854_66383965_66386235_66387269_66388399
ENSMUSG00000022043.20_0	chr14	+	3663	6	FSM	ENSMUSG00000022043.20	ENSMUST00000022623.13	3678	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTGAGTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66534488	66548867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66534999_66540629_66540726_66541453_66541685_66544474_66544498_66545260_66545380_66546183
ENSMUSG00000022043.20_2	chr14	+	1203	4	FSM	ENSMUSG00000022043.20	ENST00000521253.1	1216	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTCTGAGCGCCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	66534589	66546627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66534999_66541453_66541685_66545260_66545380_66546183
ENSMUSG00000022048.9_0	chr14	-	4508	14	FSM	ENSMUSG00000022048.9	ENSMUST00000022629.9	4520	14	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTGTCTGTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	67106126	67040313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67042886_67044363_67044530_67045310_67045491_67050574_67050746_67052403_67052546_67052879_67053037_67061793_67061915_67066219_67066289_67066810_67066892_67067369_67067432_67071660_67071826_67099921_67100107_67102530_67102620_67105778
ENSMUSG00000022051.16_0	chr14	-	3218	6	FSM	ENSMUSG00000022051.16	ENSMUST00000022634.9	3238	6	11	9	-10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCTGCCTGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	67246315	67222696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67225225_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ENSMUSG00000022051.16_1	chr14	-	3233	7	FSM	ENSMUSG00000022051.16	ENSMUST00000111115.8	3259	7	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCTGCCTGTCCATA	NA	NA	NA	NA	NA	NA	NA	NA	67246288	67222696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67225225_67226348_67226391_67226583_67226734_67226854_67226959_67231325_67231399_67236969_67237154_67246136
ENSMUSG00000022052.10_0	chr14	-	3989	10	FSM	ENSMUSG00000022052.10	ENSMUST00000089230.7	4010	10	10	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAACCTATAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	67309883	67251515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67266313_67266480_67276323_67276422_67307683_67307759_67309538
ENSMUSG00000022052.10_4	chr14	-	2077	11	FSM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAATGGGGGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	67307756	67253251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313_67266480_67275386_67275458_67276323_67276422_67307683
ENSMUSG00000022052.10_5	chr14	-	2005	10	ISM	ENSMUSG00000022052.10	ENST00000665949.1	2087	11	31337	7	31337	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAATGGGGGAATATG	NA	NA	NA	NA	NA	NA	NA	NA	67276422	67253251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_67254103_67257164_67257257_67259722_67259893_67260474_67260640_67261081_67261260_67261976_67262090_67263274_67263375_67266313_67266480_67275386_67275458_67276323
ENSMUSG00000022054.12_0	chr14	-	3312	3	FSM	ENSMUSG00000022054.12	ENSMUST00000022638.6	3334	3	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGGAGATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	68362284	68356742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_68358834_68360269_68360395_68361188
ENSMUSG00000022055.8_0	chr14	+	3358	4	FSM	ENSMUSG00000022055.8	ENSMUST00000022639.8	3380	4	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAATTCAATGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68321321	68326532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_68322459_68323422_68323548_68323935_68324256_68324756
ENSMUSG00000022056.10_0	chr14	-	1176	9	FSM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTAAGAGGAAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	68759420	68747122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065_68750156_68752219_68752395_68754009_68754138_68755893_68755979_68757845_68758016_68759378
ENSMUSG00000022056.10_1	chr14	-	1127	8	ISM	ENSMUSG00000022056.10	ENST00000520720.1	1182	9	1412	6	1412	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGTAAGAGGAAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	68758008	68747122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_68747306_68748195_68748293_68748686_68748893_68750065_68750156_68752219_68752395_68754009_68754138_68755893_68755979_68757845
ENSMUSG00000022057.9_0	chr14	-	1222	11	FSM	ENSMUSG00000022057.9	ENST00000522298.1	1234	11	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTATGAAAATACACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68819520	68806161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_68806335_68807519_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810523_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68819407
ENSMUSG00000022057.9_2	chr14	-	1479	12	FSM	ENSMUSG00000022057.9	ENST00000256412.8	1493	12	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTATGAAAATACACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	68819658	68806161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_68806335_68807519_68807651_68808340_68808423_68808780_68808948_68809201_68809274_68810274_68810335_68810523_68810715_68814535_68814613_68815299_68815379_68816602_68816680_68817985_68818105_68819407
ENSMUSG00000022064.11_0	chr14	+	2789	18	FSM	ENSMUSG00000022064.11	ENSMUST00000022650.9	2797	18	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACTGTAGAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	99337350	99491929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_99337566_99338464_99338738_99342604_99342706_99344734_99344934_99350405_99350526_99370671_99370806_99373888_99373998_99374477_99374660_99377972_99378099_99388078_99388178_99416750_99416917_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022064.11_5	chr14	+	905	8	FSM	ENSMUSG00000022064.11	ENST00000615625.1	916	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTTGAAGAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	99377981	99491652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_99378099_99423916_99424068_99425153_99425245_99433784_99433888_99448375_99448507_99458994_99459080_99480274_99480446_99491596
ENSMUSG00000022066.17_0	chr14	+	3576	13	FSM	ENSMUSG00000022066.17	ENSMUST00000185072.8	3589	13	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGACGTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	69792882	69822966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_69792988_69803184_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812849_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ENSMUSG00000022066.17_13	chr14	+	1900	12	NNC	ENSMUSG00000022066.17	novel	3589	13	NA	NA	10306	-1532	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACACTGCGTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69803202	69821437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_69803294_69804771_69804970_69806401_69806608_69810100_69810252_69811092_69811197_69812411_69812472_69812693_69812825_69814520_69814688_69817337_69817663_69819266_69819353_69820021_69820184_69821218
ENSMUSG00000022070.8_0	chr14	+	2706	12	FSM	ENSMUSG00000022070.8	ENSMUST00000022656.8	2726	12	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTTATGTCGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	99283825	99311969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_99284117_99284736_99284905_99287428_99287536_99290953_99291000_99294174_99294257_99297675_99297742_99298410_99298468_99298955_99299120_99299704_99299841_99305443_99305998_99310037_99310185_99311081
ENSMUSG00000022074.7_0	chr14	+	3163	8	FSM	ENSMUSG00000022074.7	ENSMUST00000022663.7	3179	8	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAGCAGTGTACG	NA	NA	NA	NA	NA	NA	NA	NA	70004928	70021852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70005241_70008229_70008327_70010825_70010937_70012534_70012644_70013520_70013718_70015169_70015265_70017952_70018023_70019680
ENSMUSG00000022075.8_0	chr14	-	5305	10	FSM	ENSMUSG00000022075.8	ENSMUST00000022665.4	5322	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATGACAAGTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70043074	70022444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70025185_70025306_70025413_70026080_70026170_70031352_70031504_70033348_70033468_70033722_70034742_70035587_70035774_70037126_70037231_70038066_70038269_70042485
ENSMUSG00000022076.11_0	chr14	-	3937	10	FSM	ENSMUSG00000022076.11	ENST00000545028.2	3959	10	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATGATAAAACGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96756562	96342720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_96343836_96360652_96360825_96374020_96374234_96389341_96389505_96438648_96438874_96477643_96477831_96517438_96517652_96584205_96584403_96605973_96606111_96755247
ENSMUSG00000022089.10_0	chr14	+	1745	9	FSM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	7	15	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAGCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70337560	70375640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70337646_70356052_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_3	chr14	+	1661	8	ISM	ENSMUSG00000022089.10	ENSMUST00000022680.9	1767	9	18498	15	-5238	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAGCCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70356051	70375640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_70356102_70361289_70361331_70361631_70361694_70366298_70366436_70366966_70367008_70371898_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_6	chr14	+	643	5	FSM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCCTTAGACTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70361289	70374747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70361331_70366298_70366450_70371884_70372041_70372184_70372320_70374587
ENSMUSG00000022089.10_7	chr14	+	595	4	ISM	ENSMUSG00000022089.10	ENST00000399977.8	643	5	5016	0	5016	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCCTTAGACTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	70366305	70374747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_70366450_70371884_70372041_70372184_70372320_70374587
ENSMUSG00000022090.11_0	chr14	-	1513	10	FSM	ENSMUSG00000022090.11	ENSMUST00000022681.11	1523	10	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTCCTTCTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70415126	70401672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70415057
ENSMUSG00000022090.11_1	chr14	-	1443	9	ISM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	1513	-7	-824	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTTCCTTCTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70412755	70401672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661
ENSMUSG00000022090.11_10	chr14	-	446	2	FSM	ENSMUSG00000022090.11	ENST00000443561.3	455	2	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGTCAGGTTGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70405220	70401907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70402243_70405109
ENSMUSG00000022090.11_12	chr14	-	1566	10	FSM	ENSMUSG00000022090.11	ENST00000397760.8	1578	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGTCAGGTTGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70414176	70401907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70413826
ENSMUSG00000022090.11_4	chr14	-	1557	10	FSM	ENSMUSG00000022090.11	ENSMUST00000153735.8	1578	10	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATTAAGTAGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	70414257	70401689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70402243_70403538_70403657_70405109_70405238_70405413_70405494_70408668_70408748_70408908_70409061_70409163_70409234_70411785_70411938_70412661_70412757_70414127
ENSMUSG00000022090.11_9	chr14	-	1023	7	FSM	ENSMUSG00000022090.11	ENST00000622702.1	1034	7	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGTCAGGTTGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	70411922	70401907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70402243_70403538_70403657_70405109_70405235_70405403_70405494_70408912_70409061_70409163_70409234_70411785
ENSMUSG00000022091.7_0	chr14	-	3036	21	FSM	ENSMUSG00000022091.7	ENSMUST00000227653.2	3061	21	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGACCTGCCTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	70443451	70417921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534_70429597_70430055_70430143_70430854_70430909_70431009_70431097_70431309_70431401_70432861_70432956_70433371_70433411_70436730_70436795_70438797_70438992_70440379_70440498_70440720_70440866_70443210
ENSMUSG00000022091.7_1	chr14	-	2900	21	FSM	ENSMUSG00000022091.7	ENSMUST00000022682.6	2914	21	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGACCTGCCTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	70445077	70417921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70418681_70421114_70421222_70421455_70421557_70422276_70422586_70424307_70424434_70428176_70428292_70428464_70428512_70428596_70428650_70428881_70429025_70429534_70429597_70430055_70430143_70430854_70430909_70431009_70431097_70431309_70431401_70432861_70432956_70433371_70433411_70436730_70436795_70438797_70438992_70440379_70440498_70440720_70440866_70444972
ENSMUSG00000022092.12_0	chr14	-	1950	14	FSM	ENSMUSG00000022092.12	ENSMUST00000078434.8	1970	14	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATATATATATATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	70526906	70455352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70455727_70457465_70457496_70461758_70461857_70462415_70462498_70472588_70472658_70473926_70474053_70478177_70478273_70478352_70478431_70483301_70483442_70485022_70485169_70493808_70493921_70504078_70504204_70504757_70504956_70526629
ENSMUSG00000022094.16_0	chr14	-	4894	10	FSM	ENSMUSG00000022094.16	ENSMUST00000068044.14	4926	10	32	0	32	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGTGAGTCCCAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70588842	70540917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70544262_70546098_70546284_70547206_70547415_70547531_70547721_70548304_70548425_70551049_70551220_70553886_70554074_70556110_70556390_70568717_70568816_70588728
ENSMUSG00000022095.10_0	chr14	-	4027	17	FSM	ENSMUSG00000022095.10	ENSMUST00000022690.10	4033	17	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70837269	70820735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408_70831488_70837181
ENSMUSG00000022095.10_1	chr14	-	3939	16	ISM	ENSMUSG00000022095.10	ENSMUST00000022690.10	4033	17	5788	0	5788	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGACTCTCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70831487	70820735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70822624_70822778_70822880_70823058_70823200_70823514_70823659_70823796_70823888_70824009_70824139_70824245_70824392_70824990_70825181_70825401_70825479_70825701_70825811_70826042_70826240_70826315_70826562_70827568_70827692_70827779_70827885_70829014_70829188_70831408
ENSMUSG00000022096.15_0	chr14	+	5250	18	FSM	ENSMUSG00000022096.15	ENSMUST00000163060.2	5278	18	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAATAGAACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70793358	70810975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70794441_70795068_70795850_70797078_70797230_70797312_70797504_70799251_70799417_70800768_70800859_70801006_70801123_70802741_70802824_70803468_70803633_70803749_70803987_70804219_70804386_70804588_70804659_70804941_70805073_70805215_70805336_70805416_70805533_70808817_70808983_70809347_70809477_70809681
ENSMUSG00000022097.5_1	chr14	-	385	3	ISM	ENSMUSG00000022097.5	ENST00000520605.5	455	4	1782	13	1782	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAAAACAAAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70759705	70758393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70758556_70759244_70759356_70759593
ENSMUSG00000022097.5_2	chr14	-	442	4	FSM	ENSMUSG00000022097.5	ENST00000520605.5	455	4	0	13	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAAAACAAAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70761487	70758393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70758556_70759244_70759356_70759593_70759717_70761441
ENSMUSG00000022097.5_3	chr14	-	958	5	FSM	ENSMUSG00000022097.5	ENST00000521315.5	971	5	0	13	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAAAACAAAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70761487	70758393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70758913_70759244_70759356_70759593_70759717_70760054_70760214_70761441
ENSMUSG00000022097.5_5	chr14	-	903	4	ISM	ENSMUSG00000022097.5	ENST00000521315.5	971	5	1283	13	1283	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAAAACAAAGAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	70760204	70758393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70758913_70759244_70759356_70759593_70759717_70760054
ENSMUSG00000022098.11_0	chr14	-	3666	20	FSM	ENSMUSG00000022098.11	ENSMUST00000022693.9	3684	20	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCAATATCCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	70757618	70712005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70712690_70715292_70715544_70716984_70717199_70717593_70717722_70723586_70723713_70727459_70727641_70727986_70728148_70728790_70728917_70729515_70729712_70729844_70729991_70730218_70730336_70732152_70732256_70742121_70742238_70742771_70742897_70744892_70744999_70745438_70745618_70745895_70746014_70746189_70746355_70749020_70749135_70757308
ENSMUSG00000022099.18_0	chr14	-	5391	15	NIC	ENSMUSG00000022099.18	novel	5418	16	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTGTTTCCTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	70864729	70838702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_-_70842295_70842407_70842489_70842736_70842803_70843132_70843182_70843333_70843399_70850107_70850214_70850735_70850861_70852282_70852436_70852673_70852731_70853053_70853154_70853513_70853559_70854724_70854881_70855394_70855470_70855678_70855849_70864178
ENSMUSG00000022100.15_0	chr14	-	15099	28	FSM	ENSMUSG00000022100.15	ENSMUST00000167242.8	15121	28	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGGAAGGAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	71004057	70891696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925764_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ENSMUSG00000022100.15_15	chr14	-	4412	27	ISM	ENSMUSG00000022100.15	ENSMUST00000228346.2	4491	28	610	-14	610	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTACAGAGGAACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	70944865	70902266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726
ENSMUSG00000022100.15_2	chr14	-	4468	28	FSM	ENSMUSG00000022100.15	ENSMUST00000022696.8	4472	28	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGAACATTGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	71003994	70902261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70903535_70904461_70904590_70906099_70906199_70906756_70906918_70907990_70908130_70908491_70908707_70909088_70909172_70914146_70914255_70915518_70915608_70918678_70918786_70919772_70919882_70920232_70920297_70921095_70921177_70922299_70922374_70922861_70922998_70925067_70925174_70925566_70925761_70928421_70928595_70930090_70930238_70931356_70931477_70933053_70933128_70933990_70934157_70936381_70936487_70939159_70939226_70940662_70940830_70942103_70942198_70944726_70944874_71003951
ENSMUSG00000022105.7_0	chr14	-	4625	27	FSM	ENSMUSG00000022105.7	ENSMUST00000022701.7	4656	27	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTTACTGGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	73563240	73432950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_73434725_73435971_73436022_73436621_73436765_73440264_73440296_73443183_73443348_73443449_73443564_73444654_73444760_73449043_73449190_73450423_73450570_73454103_73454220_73499968_73500166_73501732_73501810_73501889_73501922_73502012_73502070_73502955_73503073_73506550_73506639_73510072_73510151_73511076_73511187_73515853_73515932_73517561_73517705_73520307_73520419_73525042_73525111_73526148_73526188_73532350_73532471_73535493_73535610_73559456_73559584_73562962
ENSMUSG00000022106.15_0	chr14	+	3521	15	FSM	ENSMUSG00000022106.15	ENSMUST00000164822.8	3531	15	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCAGTTATTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73379979	73421651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73380034_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_11	chr14	+	3467	14	FSM	ENSMUSG00000022106.15	ENSMUST00000169479.8	3351	14	48	-164	48	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCAGTTATTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73388972	73421651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_13	chr14	+	2928	14	ISM	ENSMUSG00000022106.15	ENSMUST00000022702.13	2971	15	8381	6	58	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTACTTCTGGAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	73388982	73421127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_73389056_73391759_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_18	chr14	+	1203	8	FSM	ENSMUSG00000022106.15	ENST00000453021.1	1219	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGTAATCATCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	73399393	73414569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73399524_73399766_73399918_73402123_73402291_73403919_73404079_73405429_73405573_73411162_73411354_73411829_73411957_73414434
ENSMUSG00000022106.15_5	chr14	+	3613	16	FSM	ENSMUSG00000022106.15	ENSMUST00000169513.8	3622	16	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCCAGTTATTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73380540	73421651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73380629_73388972_73389056_73391754_73391849_73392270_73392335_73395827_73395886_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_8	chr14	+	2965	15	FSM	ENSMUSG00000022106.15	ENSMUST00000022702.13	2971	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTACTTCTGGAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	73380601	73421127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73380629_73388972_73389056_73391759_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022106.15_9	chr14	+	2154	15	FSM	ENSMUSG00000022106.15	ENSMUST00000110952.10	2176	15	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTACCAAAAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	73381044	73420112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73381271_73388972_73389056_73391754_73391849_73392270_73392335_73399379_73399536_73399766_73399918_73402123_73402291_73403919_73404079_73404204_73404313_73405429_73405573_73411162_73411354_73411829_73411957_73414434_73414575_73415872_73416004_73419898
ENSMUSG00000022108.9_0	chr14	-	1775	6	FSM	ENSMUSG00000022108.9	ENSMUST00000022704.9	1796	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAATCAGATTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	73622719	73599676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_73600584_73601981_73602133_73603191_73603303_73603760_73603968_73605738_73605868_73622449
ENSMUSG00000022108.9_8	chr14	-	725	4	FSM	ENSMUSG00000022108.9	ENST00000378549.5	746	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAAAAAGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	73622652	73600341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_73600584_73601981_73602133_73605738_73605868_73622449
ENSMUSG00000022109.7_0	chr14	+	1316	7	FSM	ENSMUSG00000022109.7	ENSMUST00000022705.7	1328	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTTTTTCAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	73747475	73755984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73747626_73748594_73748662_73751244_73751416_73752729_73752788_73754075_73754163_73754646_73754779_73755333
ENSMUSG00000022110.14_0	chr14	+	2215	11	FSM	ENSMUSG00000022110.14	ENSMUST00000160507.8	2229	11	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2998	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAATTTGGAGTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	73790113	73833577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73790338_73797880_73798062_73806073_73806174_73806301_73806465_73816795_73816925_73819118_73819258_73828196_73828359_73828449_73828593_73830071_73830193_73831116_73831206_73832813
ENSMUSG00000022111.10_0	chr14	+	882	9	FSM	ENSMUSG00000022111.10	ENSMUST00000002289.8	903	9	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTATTTTGTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101891443	101933554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_101891542_101891643_101891656_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022111.10_1	chr14	+	875	8	NIC	ENSMUSG00000022111.10	novel	903	9	NA	NA	9	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTATTTTGTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101891438	101933554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_101891542_101903196_101903326_101903947_101904105_101904427_101904514_101905964_101906013_101928007_101928084_101932594_101932654_101933337
ENSMUSG00000022114.6_0	chr14	-	2072	2	FSM	ENSMUSG00000022114.6	ENSMUST00000022709.6	2087	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAGCTGAGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106134245	106129387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_106131236_106134021
ENSMUSG00000022119.16_0	chr14	-	3254	22	FSM	ENSMUSG00000022119.16	ENSMUST00000163545.8	3270	22	5	11	5	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGCAATGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	105414291	105352411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUSG00000022119.16_1	chr14	-	3182	21	ISM	ENSMUSG00000022119.16	ENSMUST00000163545.8	3270	22	16247	9	16247	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCAATGTTTTTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	105398049	105352409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377875_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930
ENSMUSG00000022119.16_12	chr14	-	4177	21	FSM	ENSMUSG00000022119.16	ENSMUST00000163499.2	4212	21	21	14	21	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAGAAAAAAAAAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	105414679	105353584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387845_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUSG00000022119.16_8	chr14	-	3615	22	FSM	ENSMUSG00000022119.16	ENSMUST00000022715.14	3633	22	4	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATAGATAAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	105414759	105352512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_105352723_105354421_105354536_105358417_105358505_105362018_105362220_105366000_105366106_105367668_105367837_105368918_105368994_105369317_105369444_105376526_105376599_105377751_105377884_105378631_105378797_105380126_105380287_105381614_105381727_105387688_105387830_105388184_105388326_105388754_105388995_105389727_105389989_105390850_105391069_105392297_105392387_105397273_105397411_105397930_105398050_105414217
ENSMUSG00000022120.5_0	chr14	-	3396	6	FSM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACACTACATGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104760054	104714981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ENSMUSG00000022120.5_1	chr14	-	3315	5	ISM	ENSMUSG00000022120.5	ENSMUST00000022716.4	3420	6	12198	10	12198	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACACTACATGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	104747870	104714981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_104717734_104740782_104740872_104743528_104743778_104745374_104745467_104747737
ENSMUSG00000022120.5_4	chr14	-	1621	5	FSM	ENSMUSG00000022120.5	ENSMUST00000227640.2	1632	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAATCTTGAGCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	104760077	104739828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_104740872_104743528_104743778_104745374_104745467_104747737_104747874_104759976
ENSMUSG00000022124.16_0	chr14	-	4302	5	FSM	ENSMUSG00000022124.16	ENSMUST00000022720.15	4309	5	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCAAACTGTTTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103336988	103317679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336597
ENSMUSG00000022124.16_2	chr14	-	3325	5	FSM	ENSMUSG00000022124.16	ENSMUST00000145693.8	3352	5	18	9	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTAATGTGGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	103336417	103318478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103320947_103326737_103326910_103329739_103329863_103332628_103332978_103336204
ENSMUSG00000022125.8_0	chr14	+	2417	4	FSM	ENSMUSG00000022125.8	ENSMUST00000022721.8	2445	4	9	19	9	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTCAAGAAAAAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	103307660	103315045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_103307904_103309069_103309236_103310622_103310849_103313263
ENSMUSG00000022130.11_0	chr14	-	1577	12	FSM	ENSMUSG00000022130.11	ENSMUST00000228543.2	1594	12	17	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGTCTTTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	118370150	118349885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_118350472_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUSG00000022130.11_2	chr14	-	1673	12	FSM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTCTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	118370150	118349887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018_118368086_118370055
ENSMUSG00000022130.11_3	chr14	-	1578	11	ISM	ENSMUSG00000022130.11	ENSMUST00000022727.10	1682	12	2074	0	2074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTCTTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	118368085	118349887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_118350570_118351724_118351823_118352528_118352588_118353490_118353657_118354381_118354426_118355148_118355209_118357051_118357151_118359130_118359274_118364906_118364998_118365634_118365704_118368018
ENSMUSG00000022131.4_0	chr14	+	1855	9	FSM	ENSMUSG00000022131.4	ENSMUST00000022728.4	1875	9	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGTTAAACGAATTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	118374579	118400663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_118374753_118377148_118377308_118385496_118385698_118390980_118391162_118391288_118391339_118395308_118395467_118397404_118397597_118398968_118399047_118400000
ENSMUSG00000022136.9_0	chr14	+	5128	12	FSM	ENSMUSG00000022136.9	ENSMUST00000022734.9	5141	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCCACTACTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119175397	119219106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119205400_119205554_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022136.9_10	chr14	+	1662	11	FSM	ENSMUSG00000022136.9	ENST00000376795.6	1674	11	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACTTATCCTGTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	119175455	119215851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_119175583_119190520_119190632_119195279_119195405_119198197_119198273_119207511_119207694_119208094_119208215_119209774_119209881_119210104_119210226_119212543_119212677_119214121_119214271_119215438
ENSMUSG00000022139.18_0	chr14	+	4532	9	FSM	ENSMUSG00000022139.18	ENSMUST00000088419.13	4552	9	10	10	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAAGGATTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120513090	120669099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120642049_120642145_120666346
ENSMUSG00000022139.18_11	chr14	+	4569	9	FSM	ENSMUSG00000022139.18	ENST00000679496.1	4588	9	8	11	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAAGGATTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120513126	120669099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120513318_120562073_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633123_120633178_120633862_120634017_120640747_120640784_120666346
ENSMUSG00000022139.18_17	chr14	+	4587	9	FSM	ENSMUSG00000022139.18	ENST00000345429.10	4607	9	9	11	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAAGGATTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120513149	120669099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120513318_120562073_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120640747_120640784_120642049_120642145_120666346
ENSMUSG00000022139.18_29	chr14	+	4210	6	FSM	ENSMUSG00000022139.18	ENST00000397601.5	4228	6	7	11	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAAGGATTGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	120562151	120669099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120666346
ENSMUSG00000022139.18_6	chr14	+	2368	8	FSM	ENSMUSG00000022139.18	ENSMUST00000227012.2	2390	8	14	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAGATTGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120513131	120667030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120513318_120562205_120562825_120616561_120616727_120622802_120623004_120626311_120626576_120633862_120634017_120642049_120642145_120666346
ENSMUSG00000022141.8_0	chr15	-	9404	47	FSM	ENSMUSG00000022141.8	ENSMUST00000052965.8	9423	47	18	1	18	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTGTTTCCATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	8473929	8320101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_8321075_8321620_8321810_8322567_8322743_8324994_8325270_8326215_8326363_8330178_8330380_8330773_8330882_8332319_8332511_8332876_8333051_8335332_8335424_8336353_8336509_8337048_8337143_8337329_8337471_8340628_8340766_8341817_8341927_8347846_8347901_8348940_8349040_8351969_8352105_8352892_8353040_8353135_8353235_8353731_8353835_8353928_8354144_8355167_8355258_8356482_8356627_8357228_8357362_8357875_8357959_8359661_8359801_8361872_8361974_8362491_8362573_8363064_8363217_8364333_8364566_8364667_8364755_8366337_8366442_8367992_8368083_8368164_8368237_8368358_8368557_8372958_8373142_8379687_8381296_8388123_8388751_8390399_8390497_8391201_8391363_8395275_8395428_8396113_8396214_8398944_8399073_8401514_8401681_8403443_8403587_8473608
ENSMUSG00000022142.9_0	chr15	+	7815	35	FSM	ENSMUSG00000022142.9	ENSMUST00000163765.3	7832	35	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGCCATGGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	8138767	8190725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8172451_8172644_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022142.9_6	chr15	+	3987	34	FSM	ENSMUSG00000022142.9	ENST00000513532.1	4001	34	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTACTGTAGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	8138921	8187243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_8139087_8141766_8141905_8143127_8143225_8144962_8145034_8145913_8146007_8146717_8146885_8147465_8147572_8148662_8148737_8149917_8150010_8150946_8151045_8151539_8151693_8153706_8153808_8157891_8158063_8159608_8159720_8160945_8161041_8163558_8163648_8164146_8164210_8165241_8165390_8166116_8166184_8167337_8167454_8169334_8169433_8170712_8170844_8173534_8173674_8174971_8175108_8176626_8176781_8176981_8177087_8177780_8177936_8180241_8180372_8181196_8181311_8182599_8182721_8183123_8183235_8184399_8184537_8186169_8186277_8187109
ENSMUSG00000022144.5_0	chr15	+	3659	3	FSM	ENSMUSG00000022144.5	ENSMUST00000022744.5	3674	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTATTGCTTTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	7840334	7867049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7840596_7845069_7845247_7863828
ENSMUSG00000022144.5_1	chr15	+	679	3	FSM	ENSMUSG00000022144.5	ENST00000381826.8	695	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCCCGGCTCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	7844128	7864307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7844230_7845069_7845169_7863828
ENSMUSG00000022146.13_0	chr15	-	5466	18	FSM	ENSMUSG00000022146.13	ENSMUST00000022746.13	5491	18	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAAACATTTCACGAT	NA	NA	NA	NA	NA	NA	NA	NA	6904438	6843070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_6845410_6846062_6846136_6846387_6846470_6850401_6850570_6851494_6851669_6853032_6853138_6853953_6854134_6856569_6856793_6858113_6858191_6866396_6866551_6867172_6867313_6871433_6871586_6872262_6872399_6873701_6873981_6876507_6876680_6881899_6882070_6889773_6889859_6903681
ENSMUSG00000022146.13_3	chr15	-	637	4	FSM	ENSMUSG00000022146.13	ENST00000502536.5	654	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGTTAATGGTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	6903908	6876520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_6876680_6881899_6882070_6889773_6889851_6903677
ENSMUSG00000022150.17_1	chr15	+	4644	15	FSM	ENSMUSG00000022150.17	ENSMUST00000080880.12	4663	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAATGACAAAAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	6416089	6470178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6454115_6454179_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022150.17_17	chr15	+	4434	14	FSM	ENSMUSG00000022150.17	ENSMUST00000110664.9	4450	14	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGACAAAAATTTCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	6416240	6470182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_6416414_6446286_6446476_6447710_6447851_6449219_6449319_6451715_6451848_6452566_6452648_6453406_6453434_6453677_6453732_6458776_6459431_6460434_6460589_6464645_6465282_6465871_6465979_6466463_6466532_6468262
ENSMUSG00000022151.17_0	chr15	+	1665	5	FSM	ENSMUSG00000022151.17	ENSMUST00000118193.8	1671	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTCTTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5215005	5247811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5215054_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022151.17_2	chr15	+	1820	5	FSM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTCTTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5215046	5247811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5215250_5219062_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022151.17_4	chr15	+	1613	4	ISM	ENSMUSG00000022151.17	ENSMUST00000022751.15	1832	5	4026	6	3859	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTCTTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5219066	5247811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_5219285_5237849_5237932_5241479_5241612_5246630
ENSMUSG00000022156.9_0	chr14	-	911	5	FSM	ENSMUSG00000022156.9	ENSMUST00000089549.8	916	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGCATAGAGCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56358077	56355082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56355327_56355707_56355969_56356154_56356291_56356754_56356906_56357958
ENSMUSG00000022157.9_0	chr14	-	830	5	FSM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACAGATGGCATCACT	NA	NA	NA	NA	NA	NA	NA	NA	56322651	56319625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56319858_56320336_56320592_56320811_56320945_56321259_56321408_56322589
ENSMUSG00000022157.9_1	chr14	-	760	4	ISM	ENSMUSG00000022157.9	ENSMUST00000015594.9	836	5	1255	3	1255	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAACAGATGGCATCACT	NA	NA	NA	NA	NA	NA	NA	NA	56321399	56319625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_56319858_56320336_56320592_56320811_56320945_56321259
ENSMUSG00000022159.17_0	chr14	-	2891	8	FSM	ENSMUSG00000022159.17	ENSMUST00000022765.14	2906	8	8	7	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTATTTCATGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	52516994	52499222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52501275_52502155_52502225_52503646_52503759_52506098_52506192_52506374_52506458_52512899_52512968_52516370_52516443_52516652
ENSMUSG00000022160.19_0	chr14	-	2008	11	FSM	ENSMUSG00000022160.19	ENSMUST00000022767.16	2025	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAATTATGGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	52542576	52532305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52532551_52533530_52533644_52533972_52534039_52534120_52534230_52534375_52534415_52534927_52535116_52535325_52535543_52536096_52536273_52537157_52537563_52537640_52537859_52542344
ENSMUSG00000022174.9_0	chr14	-	859	3	FSM	ENSMUSG00000022174.9	ENSMUST00000022781.8	878	3	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCCATTCGTTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	54491550	54472943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54473171_54480155_54480326_54491088
ENSMUSG00000022174.9_3	chr14	-	246	2	FSM	ENSMUSG00000022174.9	ENST00000543337.1	259	2	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCGTCTCCTTACCGTG	NA	NA	NA	NA	NA	NA	NA	NA	54491288	54480195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54480326_54491172
ENSMUSG00000022175.10_0	chr14	+	4213	7	FSM	ENSMUSG00000022175.10	ENSMUST00000022782.10	4228	7	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACTAAGGTTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54701604	54708950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54702069_54702360_54702406_54703030_54703167_54704916_54705108_54705220_54706239_54706492_54706623_54706721
ENSMUSG00000022176.12_0	chr14	+	1860	5	FSM	ENSMUSG00000022176.12	ENSMUST00000164766.8	1884	5	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCACTAAGTTTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	54713575	54717883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54713832_54714927_54715273_54715484_54715559_54716410_54716619_54716906
ENSMUSG00000022177.10_0	chr14	-	1576	10	FSM	ENSMUSG00000022177.10	ENSMUST00000022784.9	1587	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGTCATTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	54791808	54779242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54786322_54786458_54787125_54787258_54787350_54787494_54789593_54789668_54791631
ENSMUSG00000022177.10_11	chr14	-	895	7	FSM	ENSMUSG00000022177.10	ENST00000342454.12	908	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGTGGAGGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	54787487	54779531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54781661_54781808_54783182_54783280_54787125_54787258_54787350
ENSMUSG00000022177.10_14	chr14	-	650	5	FSM	ENSMUSG00000022177.10	ENST00000347758.6	665	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGTGGAGGCAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	54787485	54779531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54779715_54779839_54779909_54781235_54781367_54787125_54787258_54787350
ENSMUSG00000022178.12_0	chr14	-	3378	8	FSM	ENSMUSG00000022178.12	ENSMUST00000054487.10	3397	8	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGACACTTTGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	54815005	54804937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54806514_54806932_54807002_54807701_54807754_54807833_54807965_54809057_54809121_54809222_54809291_54810848_54810951_54813688
ENSMUSG00000022179.6_0	chr14	-	2640	7	FSM	ENSMUSG00000022179.6	ENSMUST00000022786.6	2670	7	22	8	-20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTTTTCCTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	54843428	54821127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828897_54832570_54833409_54843259
ENSMUSG00000022179.6_1	chr14	-	1879	7	FSM	ENSMUSG00000022179.6	ENST00000397382.8	1898	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTCTATAACAAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	54843397	54821748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54822164_54822435_54822549_54823108_54823213_54823392_54823455_54828578_54828890_54832566_54833303_54843259
ENSMUSG00000022180.8_0	chr14	-	2784	7	FSM	ENSMUSG00000022180.8	ENST00000422941.6	2822	7	27	11	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGATGGAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	54975097	54959678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54961709_54962194_54962373_54964191_54964342_54966789_54966887_54970636_54970741_54972510_54972635_54974996
ENSMUSG00000022180.8_2	chr14	-	3284	6	FSM	ENSMUSG00000022180.8	ENST00000469263.5	3304	6	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAGATGGAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	55019253	54959678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54961709_54973180_54973335_54974996_54975123_54995895_54996048_54996997_54997203_55018636
ENSMUSG00000022181.17_0	chr15	+	2724	17	FSM	ENSMUSG00000022181.17	ENST00000263413.7	2745	17	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGCCCAGATTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	4761202	4844366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_4761285_4763144_4763302_4764605_4764751_4769240_4769383_4784722_4784862_4789282_4789484_4792823_4793065_4811321_4811445_4818960_4819128_4820448_4820675_4822166_4822337_4822611_4822724_4826386_4826520_4827733_4827923_4835513_4835605_4837772_4838015_4844202
ENSMUSG00000022184.9_0	chr15	-	1554	7	FSM	ENSMUSG00000022184.9	ENSMUST00000022791.9	1565	7	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTCATGGTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4009046	3994928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007243_4007480_4008723
ENSMUSG00000022184.9_1	chr15	-	1396	7	FSM	ENSMUSG00000022184.9	ENST00000281623.8	1407	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTTAATTTCTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	4008897	3994935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3995275_3998388_3998565_4000818_4000995_4001110_4001187_4005238_4005460_4007245_4007480_4008723
ENSMUSG00000022185.20_0	chr14	-	4715	19	FSM	ENSMUSG00000022185.20	ENSMUST00000022793.15	4735	19	13	7	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATTTGAGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54924375	54879624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916199_54916320_54916697_54916810_54922467_54922534_54923925
ENSMUSG00000022185.20_1	chr14	-	2348	12	FSM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	14	7	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATTTGAGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54891059	54879624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890991
ENSMUSG00000022185.20_2	chr14	-	2349	12	FSM	ENSMUSG00000022185.20	ENSMUST00000141453.8	2381	12	25	7	25	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATTTGAGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54891099	54879624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884025_54884159_54884291_54885544_54885588_54889173_54889316_54890991
ENSMUSG00000022185.20_3	chr14	-	2367	13	FSM	ENSMUSG00000022185.20	ENSMUST00000148754.10	2373	13	0	6	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCATTTGAGTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54891158	54879624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670_54890736_54891136
ENSMUSG00000022185.20_4	chr14	-	2278	11	ISM	ENSMUSG00000022185.20	ENSMUST00000126166.8	2369	12	1758	9	1381	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTAGCATTTGAGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54889315	54879626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173
ENSMUSG00000022185.20_6	chr14	-	1744	12	FSM	ENSMUSG00000022185.20	ENSMUST00000167015.8	1746	12	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCAAGAAAACACTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54890696	54880186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54890670
ENSMUSG00000022185.20_7	chr14	-	4042	18	FSM	ENSMUSG00000022185.20	ENSMUST00000111484.9	4048	18	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCCAAGAAAACACTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54924384	54880186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54880506_54881180_54881282_54881397_54881723_54881904_54882013_54882140_54882249_54882667_54882814_54883061_54883201_54883907_54884061_54884159_54884294_54885544_54885588_54889173_54889316_54899624_54899741_54901043_54901263_54901828_54903092_54904529_54904619_54916697_54916810_54922467_54922534_54923925
ENSMUSG00000022186.15_0	chr15	+	3509	17	FSM	ENSMUSG00000022186.15	ENSMUST00000110690.9	3527	17	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGACGAATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4055875	4184819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_4056332_4064741_4064851_4066572_4066664_4076946_4077083_4083196_4083347_4087150_4087258_4089417_4089479_4120649_4120758_4121892_4122008_4123496_4123592_4125953_4126003_4130608_4130682_4131285_4131362_4158315_4158406_4172273_4172355_4177046_4177149_4183209
ENSMUSG00000022191.17_1	chr15	+	4546	35	FSM	ENSMUSG00000022191.17	ENSMUST00000169061.8	4570	35	24	0	-24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTTGCTACAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	12824924	12935376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12825029_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUSG00000022191.17_4	chr15	+	4510	35	FSM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	2	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGATGGTCTTTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12824950	12935370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12825025_12826150_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUSG00000022191.17_7	chr15	+	4436	34	ISM	ENSMUSG00000022191.17	ENSMUST00000090292.13	4519	35	1208	1	1208	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTCTTTGCTACAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	12826156	12935376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_12826254_12827312_12827379_12833914_12834749_12837368_12837462_12842142_12842254_12842385_12842618_12846153_12846296_12848138_12848294_12851881_12851963_12859458_12859546_12861763_12861851_12865112_12865185_12866648_12866731_12867681_12867757_12878743_12878914_12881708_12881834_12883251_12883352_12885073_12885182_12889704_12889813_12890119_12890259_12890572_12890634_12901188_12901249_12902670_12902771_12905684_12905788_12907409_12907481_12912596_12912642_12913984_12914143_12915424_12915531_12924141_12924284_12926076_12926160_12926291_12926396_12928948_12929042_12929750_12929798_12935077
ENSMUSG00000022193.8_0	chr14	-	888	3	FSM	ENSMUSG00000022193.8	ENSMUST00000022803.6	899	3	10	1	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGAGTCCACAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	54855469	54851576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54851939_54853971_54854279_54855250
ENSMUSG00000022193.8_2	chr14	-	868	3	FSM	ENSMUSG00000022193.8	ENST00000493471.2	884	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGTTGTCTGCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54855442	54851638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54851939_54853902_54854279_54855250
ENSMUSG00000022194.16_0	chr14	+	1743	6	FSM	ENSMUSG00000022194.16	ENSMUST00000116476.9	1761	6	14	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGGAAAAAAAATATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	55131618	55135609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577
ENSMUSG00000022194.16_1	chr14	+	1008	7	FSM	ENSMUSG00000022194.16	ENSMUST00000022808.14	1030	7	9	13	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATATTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55131613	55135613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000022194.16_4	chr14	+	1754	5	FSM	ENSMUSG00000022194.16	ENSMUST00000150975.8	1775	5	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAAAGAGGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	55131618	55135539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55131952_55132304_55132420_55133085_55133154_55133273_55133381_55134408
ENSMUSG00000022194.16_7	chr14	+	666	7	FSM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	0	34	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAAAAAAGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	55132074	55135557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55132127_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000022195.8_0	chr15	-	3946	9	FSM	ENSMUSG00000022195.8	ENSMUST00000057256.5	3966	9	15	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTCTCAAAAACAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12824720	12808267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_12810931_12812018_12812159_12814276_12814344_12815935_12816058_12816405_12816469_12817943_12818371_12821489_12821640_12823646_12823793_12824552
ENSMUSG00000022197.17_0	chr15	-	10746	24	FSM	ENSMUSG00000022197.17	ENSMUST00000075317.12	10756	24	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCTTTGTCTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	12592638	12359802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_12362326_12365713_12365849_12367895_12368167_12368704_12368807_12371674_12371793_12372532_12376467_12382684_12382830_12385246_12386035_12387622_12387780_12388629_12388665_12390053_12390136_12399264_12399398_12401521_12401640_12402380_12402610_12402723_12402798_12406552_12406668_12407345_12407466_12411093_12411240_12419543_12419659_12437189_12437346_12442565_12442699_12445608_12445752_12457883_12458386_12592166
ENSMUSG00000022199.13_0	chr14	-	2423	10	FSM	ENSMUSG00000022199.13	ENST00000397267.5	2436	10	5	8	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATCATAGCCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	55150582	55144205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55144817_55144975_55145088_55145288_55145561_55145717_55145824_55145958_55146105_55146279_55146446_55147127_55147283_55149505_55149610_55149698_55150191_55150323
ENSMUSG00000022200.9_0	chr15	+	2639	4	FSM	ENSMUSG00000022200.9	ENSMUST00000059680.7	2652	4	13	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAGCAAGCATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	12321548	12351351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12349453
ENSMUSG00000022200.9_1	chr15	+	2352	2	FSM	ENSMUSG00000022200.9	ENSMUST00000226517.2	2359	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGAGCAAGCATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	12321588	12351351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12322043_12349453
ENSMUSG00000022200.9_2	chr15	+	2825	5	FSM	ENSMUSG00000022200.9	ENSMUST00000228671.2	2842	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAATTTAATTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	12321727	12351667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12322043_12339713_12339846_12343122_12343238_12343358_12343408_12349453
ENSMUSG00000022201.17_0	chr15	+	4838	20	FSM	ENSMUSG00000022201.17	ENSMUST00000122941.8	4850	20	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGTCTATATTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	12117928	12185769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12118034_12118324_12118425_12136481_12136765_12137990_12138136_12140519_12140739_12146234_12146483_12149613_12149806_12150258_12150551_12152886_12153084_12154531_12154652_12156348_12156495_12159684_12159848_12160570_12160777_12162199_12162351_12166230_12166373_12170901_12171000_12171844_12171941_12180707_12180820_12180928_12181027_12184044
ENSMUSG00000022203.8_0	chr14	-	2697	6	FSM	ENSMUSG00000022203.8	ENSMUST00000022813.8	2705	6	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATAGTCTTGTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	55163369	55153997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55158359_55158639_55162894
ENSMUSG00000022203.8_2	chr14	-	2540	5	FSM	ENSMUSG00000022203.8	ENSMUST00000227037.2	2540	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCTGCTTCTTGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	55163583	55154089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55154990_55156785_55156876_55157151_55157872_55157961_55158103_55162894
ENSMUSG00000022204.10_0	chr14	+	1181	11	FSM	ENSMUSG00000022204.10	ENSMUST00000022815.10	1200	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGTGAAAGACATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55252920	55261585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55253046_55253625_55253686_55254522_55254595_55258510_55258649_55258850_55258936_55259012_55259066_55259277_55259402_55259494_55259664_55260506_55260664_55260792_55260851_55261445
ENSMUSG00000022205.16_0	chr15	-	3349	5	FSM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	11996137	11981440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874_11993948_11996036
ENSMUSG00000022205.16_1	chr15	-	3248	4	ISM	ENSMUSG00000022205.16	ENSMUST00000022816.15	3372	5	2197	16	2197	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAACAAGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	11993947	11981440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_11984384_11986541_11986651_11991044_11991168_11993874
ENSMUSG00000022206.8_0	chr15	-	6840	8	FSM	ENSMUSG00000022206.8	ENSMUST00000066529.5	6892	8	45	7	45	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAACAGTTTCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	11905680	11839988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_11845375_11846383_11846472_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11904971
ENSMUSG00000022206.8_1	chr15	-	1943	9	FSM	ENSMUSG00000022206.8	ENSMUST00000228489.2	1969	9	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCACGGAGGAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	11907353	11844474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_11845375_11846383_11846469_11848554_11848691_11851513_11851609_11858702_11858839_11883383_11883551_11895767_11895891_11906699_11906804_11907156
ENSMUSG00000022208.13_0	chr14	-	4220	7	FSM	ENSMUSG00000022208.13	ENST00000397118.7	4244	7	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTTCCAAAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55354015	55344302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55345853_55346742_55347276_55347533_55347653_55350863_55351636_55352352_55352903_55353159_55353288_55353447
ENSMUSG00000022210.8_0	chr14	+	1377	8	FSM	ENSMUSG00000022210.8	ENSMUST00000022821.8	1392	8	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGTGCGTGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	55716227	55727795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724549_55724621_55724716_55724769_55725040_55725176_55725616_55725673_55727275
ENSMUSG00000022210.8_3	chr14	+	670	5	FSM	ENSMUSG00000022210.8	ENST00000397075.7	665	5	2	-7	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGTCGAAGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	55716409	55727528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55725616_55725673_55727275
ENSMUSG00000022210.8_4	chr14	+	726	6	FSM	ENSMUSG00000022210.8	ENST00000558263.5	728	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAAGTGTGGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	55716409	55727532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55716491_55717482_55717661_55723573_55723676_55724716_55724769_55725616_55725673_55727275
ENSMUSG00000022210.8_6	chr14	+	583	4	ISM	ENSMUSG00000022210.8	ENST00000397075.7	665	5	1074	0	1074	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCCTGTGGTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55717481	55727521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55717661_55723573_55723676_55725616_55725673_55727275
ENSMUSG00000022211.10_0	chr14	+	4568	40	FSM	ENSMUSG00000022211.10	ENST00000342740.6	4596	40	9	19	-3	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATTAAAAAAAAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	55728546	55745697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55728741_55730328_55730424_55730676_55730728_55730834_55730895_55730980_55731097_55731284_55731383_55731635_55731707_55731804_55731879_55732109_55732186_55732261_55732351_55732860_55732956_55733180_55733268_55733437_55733548_55733681_55733760_55734243_55734321_55734397_55734503_55734594_55734665_55735120_55735203_55735302_55735400_55735544_55735600_55735675_55735849_55736058_55736128_55736304_55736399_55736499_55736599_55736914_55737044_55737208_55737323_55737749_55737926_55738688_55738777_55738915_55739051_55739286_55739351_55739681_55739891_55740387_55740489_55741293_55741610_55741924_55742057_55742856_55742924_55743026_55743117_55744574_55744694_55744833_55745015_55745141_55745253_55745376
ENSMUSG00000022212.16_0	chr14	+	2040	17	FSM	ENSMUSG00000022212.16	ENST00000397016.6	2053	17	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGTCATGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55748053	55754899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55748167_55749437_55749610_55750038_55750219_55750628_55750704_55750844_55750920_55751090_55751175_55751263_55751354_55751690_55751796_55752021_55752109_55752675_55752736_55752979_55753114_55753184_55753240_55753319_55753372_55753708_55753843_55753983_55754221_55754406_55754583_55754688
ENSMUSG00000022212.16_5	chr14	+	1923	16	ISM	ENSMUSG00000022212.16	ENSMUST00000163767.8	2004	17	618	-4	-7	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTACCCGTCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55749434	55754892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55749610_55750038_55750219_55750628_55750704_55750844_55750920_55751090_55751175_55751263_55751354_55751690_55751796_55752021_55752109_55752675_55752736_55752979_55753114_55753184_55753240_55753319_55753372_55753708_55753843_55753983_55754221_55754406_55754583_55754688
ENSMUSG00000022214.16_0	chr14	+	2523	15	FSM	ENSMUSG00000022214.16	ENSMUST00000117236.8	2538	15	8	7	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55797470	55807515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55797579_55798666_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_1	chr14	+	2597	15	FSM	ENSMUSG00000022214.16	ENSMUST00000072530.11	2601	15	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55798385	55807515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55798433_55798531_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_13	chr14	+	2128	14	ISM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	213	2	177	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGACTTTGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55798700	55807340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55798877_55800403_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_2	chr14	+	2625	14	FSM	ENSMUSG00000022214.16	ENSMUST00000128490.9	2660	14	29	6	29	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGGCTCTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	55798456	55807515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55798900_55800348_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022214.16_4	chr14	+	2191	15	FSM	ENSMUSG00000022214.16	ENST00000396941.8	2193	15	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGACTTTGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	55798487	55807340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55798543_55798692_55798877_55800403_55800477_55800828_55800957_55801176_55801242_55801509_55801611_55801827_55801975_55802190_55802246_55802554_55802624_55802940_55802999_55803093_55803280_55804320_55804475_55804704_55804858_55806479_55806587_55806684
ENSMUSG00000022216.18_1	chr14	+	1101	11	FSM	ENSMUSG00000022216.18	ENSMUST00000174259.8	1112	11	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCCATGTCTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	55815823	55818981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55816071_55817051_55817085_55817227_55817291_55817387_55817499_55817570_55817617_55817786_55817885_55818051_55818121_55818200_55818269_55818374_55818430_55818508_55818596_55818757
ENSMUSG00000022217.15_0	chr14	-	841	5	FSM	ENSMUSG00000022217.15	ENSMUST00000022828.9	855	5	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATGTATTTATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55822745	55818978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55819201_55819337_55819433_55819512_55819583_55822135_55822213_55822368
ENSMUSG00000022221.15_0	chr14	-	1875	10	FSM	ENSMUSG00000022221.15	ENSMUST00000022830.14	1892	10	9	8	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGAGAGAGTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	56026313	56022459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56022809_56023318_56023377_56023482_56023816_56024039_56024108_56024213_56024382_56024570_56024618_56024738_56024897_56025280_56025591_56025694_56025839_56026073
ENSMUSG00000022221.15_5	chr14	-	505	4	FSM	ENSMUSG00000022221.15	ENST00000216274.10	523	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATGATTCATTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	56025472	56024267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56024376_56024570_56024618_56024738_56024897_56025280
ENSMUSG00000022223.10_0	chr14	-	1250	6	FSM	ENSMUSG00000022223.10	ENSMUST00000111325.5	1255	6	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCACTGGCTTCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	56137713	56134742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137103_56137187_56137270_56137378_56137646
ENSMUSG00000022223.10_4	chr14	-	770	4	FSM	ENSMUSG00000022223.10	ENST00000555365.5	782	4	7	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGAGCAGAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	56137371	56135066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56135470_56135699_56135844_56136640_56136763_56137270
ENSMUSG00000022223.10_5	chr14	-	726	4	FSM	ENSMUSG00000022223.10	ENST00000538105.6	738	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGAGCAGAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	56137366	56135066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56135470_56135699_56135844_56137103_56137187_56137270
ENSMUSG00000022223.10_6	chr14	-	631	3	ISM	ENSMUSG00000022223.10	ENST00000538105.6	738	4	186	5	186	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTGAGCAGAGAAGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	56137187	56135066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_56135470_56135699_56135844_56137103
ENSMUSG00000022227.6_0	chr14	+	1007	5	FSM	ENSMUSG00000022227.6	ENSMUST00000022836.6	1014	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCCAGCAGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56255427	56257834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56255511_56256017_56256169_56256471_56256608_56256805_56257061_56257452
ENSMUSG00000022227.6_1	chr14	+	925	4	ISM	ENSMUSG00000022227.6	ENSMUST00000022836.6	1014	5	589	7	589	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCCAGCAGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56256016	56257834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_56256169_56256471_56256608_56256805_56257061_56257452
ENSMUSG00000022228.15_0	chr13	-	4341	6	FSM	ENSMUSG00000022228.15	ENSMUST00000110485.3	4366	6	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGAATATAACTAAACC	NA	NA	NA	NA	NA	NA	NA	NA	21637893	21626367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21630000_21631955_21632065_21632336_21632655_21633443_21633504_21633610_21633687_21637747
ENSMUSG00000022228.15_1	chr13	-	3899	4	FSM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	3	16	3	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATATAACTAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	21637827	21626365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21630000_21631955_21632065_21633610_21633687_21637747
ENSMUSG00000022228.15_2	chr13	-	3817	3	ISM	ENSMUSG00000022228.15	ENSMUST00000032820.15	3918	4	4143	19	4143	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGAATATAACTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	21633687	21626368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_21630000_21631955_21632065_21633610
ENSMUSG00000022231.11_0	chr15	+	10787	23	FSM	ENSMUSG00000022231.11	ENSMUST00000067458.7	10809	23	9	13	9	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGAAACAATTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32244967	32696474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_32245446_32347365_32347463_32417457_32417656_32460364_32460465_32474523_32474570_32538810_32538874_32548860_32548960_32550394_32550609_32562636_32562923_32568857_32568994_32574961_32575167_32609368_32609577_32618954_32619073_32628287_32628470_32631399_32631544_32641112_32641261_32669550_32669777_32673462_32673682_32679240_32679412_32681611_32681768_32682452_32682501_32686782_32686995_32689441
ENSMUSG00000022234.16_0	chr15	-	1837	11	FSM	ENSMUSG00000022234.16	ENSMUST00000022842.16	1853	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATTCAGAGCTTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	31601939	31590950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31591202_31592430_31592612_31592791_31592930_31593012_31593199_31593660_31593781_31594242_31594393_31594479_31594673_31595790_31595990_31597556_31597722_31598145_31598207_31601746
ENSMUSG00000022235.16_0	chr15	+	1140	6	FSM	ENSMUSG00000022235.16	ENSMUST00000070918.14	1155	6	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTGAATGCGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	31568950	31590257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_31569086_31581985_31582220_31584110_31584219_31585440_31585584_31588313_31588406_31589829
ENSMUSG00000022236.11_0	chr15	-	941	5	FSM	ENSMUSG00000022236.11	ENSMUST00000110408.3	957	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTCTGTGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31453873	31441362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31441527_31443437_31443614_31449109_31449272_31451227_31451352_31453558
ENSMUSG00000022237.18_0	chr15	-	7451	4	FSM	ENSMUSG00000022237.18	ENSMUST00000123325.9	7466	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACATATGGTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	31367864	31291630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31298131_31305137_31305279_31325231_31325362_31367184
ENSMUSG00000022237.18_1	chr15	-	1104	3	FSM	ENSMUSG00000022237.18	ENST00000529293.1	1117	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGAGCGCGCAGCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31367440	31297470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31298131_31325173_31325362_31367184
ENSMUSG00000022237.18_2	chr15	-	1622	2	FSM	ENSMUSG00000022237.18	ENSMUST00000076942.5	1641	2	13	6	-12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCCTAGTGTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	31367701	31324097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31325203_31367184
ENSMUSG00000022240.11_0	chr15	+	2897	18	FSM	ENSMUSG00000022240.11	ENST00000503622.5	2903	18	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGGCTGTGATAACC	NA	NA	NA	NA	NA	NA	NA	NA	30480931	31027956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_30481041_30619367_30619400_30619968_30620086_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUSG00000022240.11_11	chr15	+	2791	17	ISM	ENSMUSG00000022240.11	ENST00000503622.5	2903	18	138439	0	138439	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAAGGCTGTGATAACC	NA	NA	NA	NA	NA	NA	NA	NA	30619364	31027956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_30619400_30619968_30620086_30669557_30669753_30683360_30683617_30775244_30775378_30806831_30807046_30847373_30847558_30881268_30881387_30887239_30887426_30905805_30905980_30922000_30922152_30966901_30967113_30972938_30973024_31005094_31005222_31009178_31009311_31020846_31020921_31027557
ENSMUSG00000022241.7_0	chr15	-	3987	19	FSM	ENSMUSG00000022241.7	ENSMUST00000022849.7	4005	19	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACCATGTGTGACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	11399740	11382393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_11384246_11385169_11385285_11387137_11387211_11387348_11387454_11387557_11387659_11387786_11387865_11388166_11388305_11388383_11388547_11389661_11389829_11390397_11390497_11391146_11391294_11391899_11391979_11392055_11392121_11392317_11392436_11392872_11392995_11393242_11393367_11394309_11394501_11397266_11397348_11399571
ENSMUSG00000022244.8_0	chr15	+	2566	5	FSM	ENSMUSG00000022244.8	ENSMUST00000070877.7	2577	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGAATCACCAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	10981850	10996710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10982140_10983435_10983580_10984771_10984933_10988844_10989032_10994925
ENSMUSG00000022245.16_0	chr9	-	108	2	FSM	ENSMUSG00000022245.16	ENST00000558889.5	121	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAAGGTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	63047293	63046791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63046846_63047239
ENSMUSG00000022246.15_1	chr15	-	4888	18	FSM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTTGTGGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10713606	10569055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10713431
ENSMUSG00000022246.15_2	chr15	-	4725	17	FSM	ENSMUSG00000022246.15	ENSMUST00000227506.2	4732	17	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTTGTGGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10714178	10569055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714079
ENSMUSG00000022246.15_5	chr15	-	4623	16	ISM	ENSMUSG00000022246.15	ENSMUST00000227506.2	4732	17	23645	5	23087	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGATTTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	10690539	10569059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456
ENSMUSG00000022246.15_7	chr15	-	4757	18	FSM	ENSMUSG00000022246.15	ENSMUST00000169385.3	4759	18	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTTGTGGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10714652	10569055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456_10690539_10714608
ENSMUSG00000022246.15_8	chr15	-	4698	17	ISM	ENSMUSG00000022246.15	ENSMUST00000090339.11	4909	18	23103	1	23103	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGATTTGTGGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10690523	10569055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_10570861_10571579_10571646_10572416_10572567_10574397_10575931_10578453_10578573_10583867_10583923_10587923_10588011_10589344_10589432_10591672_10591702_10592157_10592337_10593085_10593193_10595071_10595143_10595920_10595979_10599805_10599871_10610090_10610180_10633221_10633353_10690456
ENSMUSG00000022247.13_0	chr15	-	2653	10	FSM	ENSMUSG00000022247.13	ENSMUST00000022855.12	2664	10	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATAAGGCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10486024	10474866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_10476683_10476892_10477022_10478754_10478857_10478978_10479030_10479158_10479233_10479334_10479385_10479666_10479738_10481801_10481846_10483380_10483493_10485820
ENSMUSG00000022248.15_0	chr15	+	1497	6	FSM	ENSMUSG00000022248.15	ENSMUST00000022856.15	1514	6	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGTACTGTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	10486115	10493770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10486351_10486538_10486803_10488075_10488185_10490341_10490601_10492850_10492950_10493239
ENSMUSG00000022253.18_10	chr15	+	733	8	FSM	ENSMUSG00000022253.18	ENST00000617628.4	744	8	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGAAGGGCGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	9085818	9108437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_14	chr15	+	664	7	ISM	ENSMUSG00000022253.18	ENST00000617628.4	744	8	5440	8	5440	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGAAGGGCGTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	9091255	9108437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_9091339_9092802_9092940_9096102_9096182_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_2	chr15	+	1920	11	FSM	ENSMUSG00000022253.18	ENST00000282512.7	1932	11	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTGCGGGATGAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	9083355	9109342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_9083439_9084241_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022253.18_7	chr15	+	1831	10	ISM	ENSMUSG00000022253.18	ENST00000282512.7	1932	11	895	9	895	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTGCGGGATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	9084244	9109339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_9084331_9085804_9085887_9091254_9091339_9092802_9092940_9096102_9096182_9100194_9100291_9103070_9103127_9103413_9103468_9106816_9106941_9108306
ENSMUSG00000022255.17_0	chr15	+	6900	12	FSM	ENSMUSG00000022255.17	ENSMUST00000022865.17	6919	12	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	3689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACCACCACTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	34082874	34145761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34123813_34123913_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ENSMUSG00000022255.17_13	chr15	+	2154	11	FSM	ENSMUSG00000022255.17	ENST00000519934.5	2171	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTACAGTTCTTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34083229	34141469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34083560_34099629_34099732_34114169_34114255_34114944_34115122_34116456_34116523_34118025_34118257_34131309_34131435_34134436_34134545_34136832_34136974_34139886_34140044_34140837
ENSMUSG00000022257.5_0	chr15	+	1880	7	FSM	ENSMUSG00000022257.5	ENSMUST00000022867.5	1902	7	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAAAACAGTCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34238184	34284437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34238569_34258826_34258939_34272489_34272564_34273373_34273497_34276281_34276381_34277577_34277674_34283445
ENSMUSG00000022261.7_1	chr15	+	3506	5	FSM	ENSMUSG00000022261.7	ENSMUST00000022871.7	3527	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAACAAACTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32920878	33035070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_32921452_33017247_33017360_33023794_33023932_33028192_33028329_33032522
ENSMUSG00000022261.7_6	chr15	+	1134	4	FSM	ENSMUSG00000022261.7	ENST00000518385.5	1143	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGCAAAGGCAAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	32921382	33033310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_32921456_33023794_33023932_33028192_33028329_33032522
ENSMUSG00000022261.7_8	chr15	+	1066	3	ISM	ENSMUSG00000022261.7	ENST00000518385.5	1143	4	102415	1	102415	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGGCAAATTAATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	33023794	33033315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_33023932_33028192_33028329_33032522
ENSMUSG00000022263.11_0	chr15	-	4007	10	FSM	ENSMUSG00000022263.11	ENST00000344135.5	4016	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTTAGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27747567	27730737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_27733117_27733591_27733731_27735464_27735666_27736532_27736612_27740660_27740783_27741001_27741165_27741337_27741366_27742457_27742597_27744038_27744287_27747058
ENSMUSG00000022265.8_0	chr15	+	3483	12	FSM	ENSMUSG00000022265.8	ENSMUST00000022875.7	3498	12	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTGGCTATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	27466773	27594991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_27467186_27544336_27544554_27553774_27553894_27557249_27557334_27562809_27562981_27564987_27565123_27567600_27567694_27571644_27571741_27590428_27590559_27591003_27591128_27591522_27591623_27593189
ENSMUSG00000022269.14_0	chr15	+	1540	4	FSM	ENSMUSG00000022269.14	ENSMUST00000140840.8	1558	4	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	26309164	26409659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_26309879_26311056_26311213_26387833_26388027_26409182
ENSMUSG00000022269.14_1	chr15	+	1359	3	FSM	ENSMUSG00000022269.14	ENSMUST00000152841.2	1365	3	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	26309152	26409659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_26309879_26311056_26311213_26409182
ENSMUSG00000022270.17_0	chr15	+	3230	9	FSM	ENSMUSG00000022270.17	ENSMUST00000022881.15	3248	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTATTCCTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	25843276	25973766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_19	chr15	+	1491	5	FSM	ENSMUSG00000022270.17	ENST00000684456.1	1504	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGACAGCTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	25941068	25972538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25941330_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022270.17_3	chr15	+	3167	10	FSM	ENSMUSG00000022270.17	ENST00000682229.1	3188	10	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAATACAGCCACATA	NA	NA	NA	NA	NA	NA	NA	NA	25843428	25973729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25843699_25889566_25889674_25895198_25895230_25933456_25933583_25964309_25964437_25966718_25966804_25968492_25968631_25969881_25969947_25970183_25970311_25971638
ENSMUSG00000022272.18_0	chr15	+	8105	41	FSM	ENSMUSG00000022272.18	ENSMUST00000110457.8	8125	41	11	9	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGCTGTGTTTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25622621	25813750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725157_25725172_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ENSMUSG00000022272.18_1	chr15	+	8099	40	NIC	ENSMUSG00000022272.18	novel	8125	41	NA	NA	6	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGTGTTTGCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25622616	25813753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_+_25623117_25666511_25666611_25701647_25701807_25714114_25714303_25722255_25722391_25723969_25724095_25725281_25725367_25726505_25726610_25732055_25732186_25734073_25734193_25736031_25736179_25736486_25736588_25736680_25736748_25737535_25737629_25738042_25738112_25739372_25739456_25742426_25742536_25744261_25744343_25776106_25776232_25776403_25776519_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ENSMUSG00000022272.18_13	chr15	+	5855	21	FSM	ENSMUSG00000022272.18	ENSMUST00000022882.12	5880	21	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATATGCTGTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25753010	25813747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25753407_25778166_25778274_25779668_25779897_25780449_25780499_25781059_25781951_25783003_25783128_25785888_25786133_25793236_25793333_25795768_25795863_25797284_25797341_25799496_25799640_25800126_25800322_25801208_25801367_25803348_25803473_25804384_25804683_25805596_25805805_25806628_25806766_25807142_25807264_25807821_25808275_25810444_25810637_25812206
ENSMUSG00000022280.10_0	chr15	-	4260	10	FSM	ENSMUSG00000022280.10	ENSMUST00000022890.10	4277	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATGGATTTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36283285	36240087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36242212_36244232_36244377_36245561_36245776_36247267_36247430_36247896_36248012_36253146_36253310_36254528_36254674_36260160_36260370_36265421_36266178_36283057
ENSMUSG00000022283.16_0	chr15	-	2689	16	FSM	ENSMUSG00000022283.16	ENST00000520804.2	2689	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTTTGATTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36609834	36595888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36609018_36609778
ENSMUSG00000022283.16_15	chr15	-	2626	15	FSM	ENSMUSG00000022283.16	ENSMUST00000001809.15	2817	15	199	-8	199	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTTATTTACTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	36609018	36595896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_2	chr15	-	2410	15	FSM	ENSMUSG00000022283.16	ENST00000677140.1	2420	15	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTTTGATTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36608803	36595888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603098_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_3	chr15	-	2692	16	FSM	ENSMUSG00000022283.16	ENST00000522720.2	2695	16	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTTTGATTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	36609840	36595888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557_36609015_36609778
ENSMUSG00000022283.16_84	chr15	-	2185	14	FSM	ENSMUSG00000022283.16	ENST00000519100.6	2201	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTGGGACATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	36608804	36596012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596344_36596806_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36605987_36606182_36608557
ENSMUSG00000022283.16_93	chr15	-	1754	14	FSM	ENSMUSG00000022283.16	ENST00000610907.2	1767	14	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTTCTCCCTCGCCC	NA	NA	NA	NA	NA	NA	NA	NA	36608739	36596808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36596900_36597207_36597339_36597700_36597786_36598216_36598372_36598445_36598557_36599195_36599287_36599448_36599722_36600836_36600933_36601113_36601252_36601558_36601654_36603089_36603230_36605685_36605802_36606131_36606182_36608557
ENSMUSG00000022285.18_0	chr15	-	3271	7	FSM	ENSMUSG00000022285.18	ENSMUST00000022894.14	3288	7	11	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAGGCATGAGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	36794771	36771019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722_36793920_36794388
ENSMUSG00000022285.18_14	chr15	-	2105	6	FSM	ENSMUSG00000022285.18	ENSMUST00000110362.4	2122	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGGACTTTTCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	36794073	36771956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36773022_36775482_36775579_36775659_36775824_36776489_36776614_36790927_36791233_36793722
ENSMUSG00000022286.17_0	chr15	+	2089	16	FSM	ENSMUSG00000022286.17	ENST00000395927.1	2101	16	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCCAGTAATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	37233623	37361239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_37233711_37270833_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ENSMUSG00000022286.17_8	chr15	+	2003	15	ISM	ENSMUSG00000022286.17	ENST00000395927.1	2101	16	37214	7	37214	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCCCAGTAATGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	37270832	37361239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_37271030_37274886_37274955_37279577_37279972_37287485_37287542_37288431_37288589_37291804_37291917_37309908_37310004_37328473_37328633_37335945_37336034_37336449_37336590_37338016_37338049_37344896_37344992_37348012_37348099_37358613_37358679_37360980
ENSMUSG00000022292.17_0	chr15	-	4541	9	FSM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAATAAATTGTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	37961338	37924206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37927642_37929281_37929396_37931845_37931951_37937459_37937594_37944741_37944837_37945282_37945417_37946978_37947096_37953842_37953999_37961087
ENSMUSG00000022292.17_2	chr15	-	140	1	ISM	ENSMUSG00000022292.17	ENSMUST00000022901.16	4561	9	33711	3301	33499	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	775	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAAGCCCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37927636	37927496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_37927500_37927600
ENSMUSG00000022292.17_3	chr15	-	193	2	FSM	ENSMUSG00000022292.17	ENST00000519962.5	201	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAAGCCCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37961135	37927496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37927642_37961087
ENSMUSG00000022295.9_0	chr15	+	2054	13	FSM	ENSMUSG00000022295.9	ENSMUST00000022904.8	2071	13	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGCAGTGCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	38662184	38692681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38662328_38673100_38673265_38674140_38674209_38676271_38676358_38677762_38677858_38679563_38679656_38681310_38681410_38683184_38683254_38687047_38687141_38687259_38687354_38689368_38689467_38690776_38690904_38691855
ENSMUSG00000022296.11_0	chr15	+	2464	3	FSM	ENSMUSG00000022296.11	ENSMUST00000163313.3	2492	3	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCAAACATATGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	38796553	38814646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38796717_38797304_38797472_38812512
ENSMUSG00000022297.16_0	chr15	+	4317	7	FSM	ENSMUSG00000022297.16	ENSMUST00000179165.9	4325	7	6	2	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGATTGTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38869434	38901581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38869828_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUSG00000022297.16_1	chr15	+	4070	7	FSM	ENSMUSG00000022297.16	ENSMUST00000022906.8	4081	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGATTGTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38869738	38901581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38869885_38870619_38870959_38889060_38889258_38894209_38895228_38897244_38897394_38898202_38898623_38899780
ENSMUSG00000022299.10_0	chr15	-	5887	7	FSM	ENSMUSG00000022299.10	ENSMUST00000022908.10	5905	7	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAATAAGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	38976105	38954637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38959504_38960914_38961061_38961523_38961638_38963267_38963429_38965377_38965464_38969226_38969378_38975742
ENSMUSG00000022300.11_0	chr15	+	1534	11	FSM	ENSMUSG00000022300.11	ENSMUST00000022909.10	1551	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTAAACACTGCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38976267	39010242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38976447_38982105_38982306_38982739_38982848_38986607_38986698_38987723_38987880_38991284_38991363_38993610_38993694_39001478_39001644_39007017_39007154_39008485_39008650_39010067
ENSMUSG00000022305.14_0	chr15	-	4092	7	FSM	ENSMUSG00000022305.14	ENSMUST00000022916.13	4109	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATCAAAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	39807174	39733991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39767934_39767992_39806999
ENSMUSG00000022305.14_3	chr15	-	4244	6	FSM	ENSMUSG00000022305.14	ENSMUST00000110305.3	4244	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTACTTTTTAAATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	39807390	39733998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_39736275_39739482_39739616_39741190_39742296_39743515_39743719_39748401_39748538_39806999
ENSMUSG00000022307.17_0	chr15	+	4504	16	FSM	ENSMUSG00000022307.17	ENSMUST00000090096.11	4515	16	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCAAATGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41310880	41724433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41310986_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_18	chr15	+	4328	14	FSM	ENSMUSG00000022307.17	ENSMUST00000170127.9	4346	14	8	10	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCAAATGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41652344	41724433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41652629_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_2	chr15	+	4478	16	FSM	ENSMUSG00000022307.17	ENSMUST00000179393.8	4498	16	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCAAATGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41312434	41724433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41312514_41398965_41399124_41516860_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_22	chr15	+	4222	15	FSM	ENSMUSG00000022307.17	ENSMUST00000022918.15	4239	15	7	10	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCAAATGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41652917	41724433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41653015_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_23	chr15	+	4143	14	FSM	ENSMUSG00000022307.17	ENSMUST00000090095.13	4158	14	5	10	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGCAAATGAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41652915	41724433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41653015_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683975_41686722_41686892_41689285_41689449_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022307.17_7	chr15	+	2757	15	FSM	ENSMUSG00000022307.17	ENST00000442977.6	2768	15	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACACCATGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	41516873	41722877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_41517058_41660869_41660953_41663866_41663975_41664977_41665092_41676969_41677123_41680477_41680663_41683234_41683979_41686722_41686892_41689285_41689449_41712065_41712147_41713854_41713981_41714770_41714924_41716717_41716814_41718316_41718391_41722553
ENSMUSG00000022309.10_0	chr15	-	4239	9	FSM	ENSMUSG00000022309.10	ENSMUST00000022921.7	4260	9	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAATGTCTTCATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	42540359	42288125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_42290527_42301670_42301802_42323062_42323230_42331551_42331654_42339773_42339902_42359622_42359856_42375679_42375802_42386899_42387056_42539560
ENSMUSG00000022312.12_0	chr15	-	1279	8	FSM	ENSMUSG00000022312.12	ENSMUST00000022925.10	1295	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTTGTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	51728909	51649959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_51650222_51651301_51651435_51653388_51653510_51659783_51659934_51661008_51661109_51662587_51662756_51705863_51706021_51728721
ENSMUSG00000022313.11_0	chr15	+	2905	3	FSM	ENSMUSG00000022313.11	ENSMUST00000137116.3	2921	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGACAAGTTTAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	51740835	51748005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_51741107_51744411_51744587_51745546
ENSMUSG00000022313.11_1	chr15	+	321	2	FSM	ENSMUSG00000022313.11	ENST00000517820.1	336	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGGCCACCAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	51740922	51828437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_51741111_51828304
ENSMUSG00000022313.11_5	chr15	+	304	2	FSM	ENSMUSG00000022313.11	ENST00000520733.5	325	2	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATAAATGGCCACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51744422	51828435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_51744615_51828323
ENSMUSG00000022314.11_0	chr15	-	3933	14	FSM	ENSMUSG00000022314.11	ENSMUST00000022927.11	3956	14	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGATTTGAAAATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	51855130	51825645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_51827644_51828350_51828435_51829977_51830128_51831183_51831333_51831746_51831919_51833316_51833541_51835141_51835265_51835597_51835724_51836481_51836689_51837232_51837340_51839494_51839595_51841440_51841571_51845924_51846100_51854942
ENSMUSG00000022322.9_0	chr8	-	2139	13	FSM	ENSMUSG00000022322.9	ENSMUST00000022945.9	2156	13	12	5	12	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGCTTGTGTGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	4829542	4785980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_4786408_4789124_4789267_4789594_4789682_4791847_4791967_4794446_4794579_4798704_4798826_4799291_4799461_4799551_4799786_4804219_4804313_4814880_4815090_4817906_4818023_4818143_4818312_4829420
ENSMUSG00000022323.12_0	chr15	-	992	6	FSM	ENSMUSG00000022323.12	ENSMUST00000022946.6	1004	6	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGTTTTTAATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34495390	34484167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34484682_34485745_34485802_34486756_34486826_34487887_34487943_34488719_34488826_34495198
ENSMUSG00000022324.16_0	chr15	+	3115	18	FSM	ENSMUSG00000022324.16	ENST00000521689.5	3132	18	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCTATATCCTTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	34306708	34433725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34307045_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378928_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235_34433314_34433632
ENSMUSG00000022324.16_11	chr15	+	3537	19	FSM	ENSMUSG00000022324.16	ENSMUST00000022947.7	3551	19	8	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGATTAGGGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	34306834	34436413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433235_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_20	chr15	+	3551	19	FSM	ENSMUSG00000022324.16	ENSMUST00000227759.2	3569	19	11	7	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGAAAATAGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34306841	34436377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34307055_34316636_34316802_34345136_34345707_34355708_34355832_34378800_34378924_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_34	chr15	+	3035	16	FSM	ENSMUSG00000022324.16	ENST00000524308.5	3056	16	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCACCATTCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34345145	34436367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34345707_34355708_34355832_34378800_34378928_34388869_34388993_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_40	chr15	+	2578	16	FSM	ENSMUSG00000022324.16	ENST00000522025.6	2594	16	8	8	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCCAGAAAATAGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	34355737	34436377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34355832_34378800_34378928_34388869_34388993_34399195_34399319_34402980_34403104_34409898_34410022_34410259_34410383_34422487_34422611_34423839_34423963_34426308_34426432_34428579_34428994_34431617_34431771_34432825_34432898_34433178_34433314_34433632_34433732_34435877
ENSMUSG00000022324.16_8	chr15	+	3236	3	FSM	ENSMUSG00000022324.16	ENSMUST00000226766.2	3252	3	14	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTCTTGTCAGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34306839	34347992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34307055_34316636_34316802_34345136
ENSMUSG00000022325.15_0	chr15	+	3382	17	FSM	ENSMUSG00000022325.15	ENSMUST00000052290.14	3395	17	6	7	6	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGATGATGATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34495455	34530787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34513235_34513326_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ENSMUSG00000022325.15_2	chr15	+	3253	16	FSM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGTAATCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34495480	34530773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_34495562_34499434_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ENSMUSG00000022325.15_6	chr15	+	3174	15	ISM	ENSMUSG00000022325.15	ENSMUST00000079028.6	3275	16	3964	10	3964	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATGTAATCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34499432	34530773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_34499579_34502456_34502625_34505104_34505281_34506564_34506814_34508265_34508354_34508749_34508938_34509908_34510166_34510477_34510572_34512059_34512172_34512877_34512998_34515987_34516104_34517972_34518165_34526308_34526464_34529028_34529377_34530008
ENSMUSG00000022329.16_0	chr15	-	2892	11	FSM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGAACTTGGCGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35155938	34875649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710_35115792_35155672
ENSMUSG00000022329.16_16	chr15	-	2450	9	FSM	ENSMUSG00000022329.16	ENSMUST00000067033.8	2471	9	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAATTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	35155888	34875831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35155672
ENSMUSG00000022329.16_2	chr15	-	2626	10	ISM	ENSMUSG00000022329.16	ENSMUST00000018476.14	2914	11	40161	8	40105	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGAACTTGGCGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	35115791	34875649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_34876967_34945151_34945328_34959011_34959223_34999976_35000103_35008306_35008445_35072575_35072744_35073202_35073368_35099579_35099695_35114674_35114804_35115710
ENSMUSG00000022332.9_0	chr15	+	1875	9	FSM	ENSMUSG00000022332.9	ENSMUST00000022954.7	1887	9	3	9	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTTGAAAGAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	68800271	68965352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_68800683_68866900_68867020_68885206_68885324_68889176_68889324_68896548_68896689_68901563_68901760_68921227_68921311_68962982_68963042_68964749
ENSMUSG00000022335.18_0	chr15	-	4370	16	FSM	ENSMUSG00000022335.18	ENSMUST00000162054.9	4388	16	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAATGCATTTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	68130696	67955621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_67956411_67973319_67973451_67976804_67976929_67982325_67982412_67990784_67990924_68018351_68018441_68037601_68037776_68040563_68040714_68041984_68042073_68050559_68050793_68051565_68053008_68056269_68056421_68058899_68059086_68084462_68084694_68096615_68096793_68130516
ENSMUSG00000022336.4_0	chr15	-	1488	13	FSM	ENSMUSG00000022336.4	ENSMUST00000022960.4	1506	13	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	6711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTAATTTTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	43146105	43113461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_43113634_43114875_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43145998
ENSMUSG00000022336.4_15	chr15	-	1359	12	FSM	ENSMUSG00000022336.4	ENST00000678023.1	1378	12	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGAGGTAAGAATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	43171983	43114882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43171826
ENSMUSG00000022336.4_16	chr15	-	1196	11	FSM	ENSMUSG00000022336.4	ENST00000677272.1	1210	11	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAGAGGTAAGAATCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	43146088	43114882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_43115011_43115600_43115704_43124455_43124566_43125994_43126097_43126604_43126732_43128896_43129022_43129529_43129656_43134274_43134380_43135671_43135715_43138632_43138770_43145998
ENSMUSG00000022336.4_32	chr15	-	2143	6	FSM	ENSMUSG00000022336.4	ENST00000676487.1	2160	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTAGATTTATTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43171985	43131842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_43133368_43134196_43134380_43135671_43135715_43138632_43138751_43141703_43141819_43171826
ENSMUSG00000022337.8_0	chr15	+	1213	11	FSM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACTCATGTATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43340632	43391149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_43340722_43355565_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022337.8_6	chr15	+	1126	10	ISM	ENSMUSG00000022337.8	ENSMUST00000022962.8	1231	11	14939	10	14939	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACTCATGTATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43355563	43391149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_43355680_43358135_43358201_43358559_43358646_43360456_43360515_43371040_43371127_43371257_43371318_43374210_43374293_43375095_43375207_43377140_43377246_43390792
ENSMUSG00000022338.9_0	chr15	+	543	5	FSM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGAGTTTCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44291494	44299255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44291567_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_16	chr15	+	753	4	ISM	ENSMUSG00000022338.9	ENST00000520147.5	827	5	1454	5	1454	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTCACATTTGATAACT	NA	NA	NA	NA	NA	NA	NA	NA	44292961	44299438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_44293033_44295833_44295905_44297294_44297475_44299007
ENSMUSG00000022338.9_19	chr15	+	471	4	ISM	ENSMUSG00000022338.9	ENSMUST00000226827.2	558	5	1468	8	1448	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATGAGTTTCAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44292955	44299255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_4	chr15	+	2987	5	FSM	ENSMUSG00000022338.9	ENSMUST00000060652.5	3000	5	9	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTTTGGCTCTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	44291515	44301648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44291639_44292955_44293033_44295833_44295905_44297294_44297370_44299007
ENSMUSG00000022338.9_5	chr15	+	821	5	FSM	ENSMUSG00000022338.9	ENST00000520147.5	827	5	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTCACATTTGATAACT	NA	NA	NA	NA	NA	NA	NA	NA	44291508	44299438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44291571_44292955_44293033_44295833_44295905_44297294_44297475_44299007
ENSMUSG00000022339.10_0	chr15	+	1923	7	FSM	ENSMUSG00000022339.10	ENSMUST00000227691.2	1945	7	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTGAAATATAACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	44482582	44504901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44482766_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUSG00000022339.10_1	chr15	+	1914	7	FSM	ENSMUSG00000022339.10	ENSMUST00000226165.2	1931	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTGGAAAGCCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	44482845	44504617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44483304_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUSG00000022339.10_2	chr15	+	1591	7	FSM	ENSMUSG00000022339.10	ENSMUST00000022964.9	1613	7	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATCAAATATTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	44482999	44504413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44483339_44487838_44487937_44490952_44491032_44491771_44491931_44493500_44493609_44500159_44500252_44503697
ENSMUSG00000022340.16_0	chr15	-	2957	8	FSM	ENSMUSG00000022340.16	ENSMUST00000110267.9	3127	8	163	7	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44615691	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44615482
ENSMUSG00000022340.16_1	chr15	-	2788	7	FSM	ENSMUSG00000022340.16	ENSMUST00000228057.2	3026	7	234	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44611834	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704
ENSMUSG00000022340.16_3	chr15	-	2887	8	FSM	ENSMUSG00000022340.16	ENSMUST00000227305.2	3124	8	230	7	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44615624	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609856_44611704_44611795_44615482
ENSMUSG00000022340.16_5	chr15	-	3065	9	NIC	ENSMUSG00000022340.16	novel	3081	9	NA	NA	8	-4	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44615691	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44612646_44612755_44615482
ENSMUSG00000022340.16_6	chr15	-	2995	8	FSM	ENSMUSG00000022340.16	ENSMUST00000090057.6	3230	8	228	7	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44651231	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44609641_44609859_44611704_44611795_44650984
ENSMUSG00000022340.16_7	chr15	-	2684	6	FSM	ENSMUSG00000022340.16	ENSMUST00000110269.8	2920	6	232	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATGTTTGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44651227	44535258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44537045_44538761_44538912_44540930_44541135_44546743_44546847_44582183_44582382_44650984
ENSMUSG00000022346.18_0	chr15	+	2311	3	FSM	ENSMUSG00000022346.18	ENSMUST00000161976.8	2338	3	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATAAAATAATTG	NA	NA	NA	NA	NA	NA	NA	NA	61857247	61862180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_61857801_61859355_61860128_61861194
ENSMUSG00000022346.18_1	chr15	+	2170	3	FSM	ENSMUSG00000022346.18	ENSMUST00000159327.2	2186	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGTTTTCTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	61857424	61862219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_61857801_61859358_61860128_61861194
ENSMUSG00000022346.18_2	chr15	+	1727	2	FSM	ENSMUSG00000022346.18	ENSMUST00000160009.2	1765	2	23	15	23	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGTTACAAAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	61859293	61862087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_61860128_61861194
ENSMUSG00000022350.8_0	chr15	-	2598	19	FSM	ENSMUSG00000022350.8	ENSMUST00000227725.2	2618	19	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGAGTTGCCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59224362	59203849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224138
ENSMUSG00000022350.8_1	chr15	-	4020	29	FSM	ENSMUSG00000022350.8	ENSMUST00000022976.6	4033	29	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTGAGTTGCCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59246007	59203849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_59204209_59205466_59205555_59206936_59207091_59209041_59209139_59210762_59210893_59211662_59211767_59212740_59212821_59212908_59213012_59213787_59213951_59215873_59215999_59217186_59217367_59218062_59218165_59218668_59218750_59220233_59220375_59221141_59221253_59221980_59222057_59222135_59222303_59223320_59223434_59224349_59224480_59227682_59227811_59231111_59231284_59232971_59233086_59235042_59235196_59238011_59238205_59239243_59239345_59240224_59240310_59241001_59241148_59241728_59242035_59245889
ENSMUSG00000022351.15_0	chr15	+	2742	11	FSM	ENSMUSG00000022351.15	ENSMUST00000022977.14	2758	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATGTTCTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59186938	59203034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59196310_59196407_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUSG00000022351.15_2	chr15	+	2629	10	FSM	ENSMUSG00000022351.15	ENSMUST00000100640.5	2636	10	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTTATGTTCTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59186955	59203034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59187979_59189644_59189898_59193162_59193344_59194684_59194782_59195462_59195577_59195655_59195828_59197883_59198027_59198418_59198516_59201588_59201677_59202573
ENSMUSG00000022353.11_0	chr15	-	4913	15	FSM	ENSMUSG00000022353.11	ENSMUST00000080371.8	4938	15	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCACTAAGAAAAAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58953830	58813099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58815980_58817210_58817374_58817694_58817869_58819174_58819370_58823318_58823530_58825362_58825461_58826954_58827063_58828281_58828440_58836345_58836358_58840687_58840763_58842825_58842918_58844324_58844410_58926866_58926941_58930209_58930272_58953304
ENSMUSG00000022353.11_7	chr15	-	1662	7	FSM	ENSMUSG00000022353.11	ENST00000431961.6	1677	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAATTCGGAATCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58828432	58815171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58815980_58817210_58817374_58817694_58817818_58823318_58823530_58825362_58825461_58826954_58827063_58828281
ENSMUSG00000022354.5_0	chr15	+	685	4	FSM	ENSMUSG00000022354.5	ENSMUST00000022980.5	704	4	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGACACGTTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58805613	58811327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58805788_58808116_58808310_58809200_58809315_58811123
ENSMUSG00000022357.3_0	chr15	-	2194	4	FSM	ENSMUSG00000022357.3	ENSMUST00000022985.2	2212	4	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGAAGAGGTTCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	58187559	58177980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58178513_58179622_58179729_58185377_58186729_58187354
ENSMUSG00000022358.8_0	chr15	-	6957	9	FSM	ENSMUSG00000022358.8	ENSMUST00000022986.8	6976	9	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACACACCCTGGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	58078317	58039282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58044952_58046230_58046375_58047477_58047661_58054680_58054866_58055666_58055761_58068608_58068702_58069594_58069645_58071350_58071464_58077891
ENSMUSG00000022358.8_4	chr15	-	1027	7	FSM	ENSMUSG00000022358.8	ENST00000443022.2	1036	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCCCTAACGATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	58078015	58044631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58044952_58046230_58046375_58047477_58047661_58068608_58068702_58069594_58069645_58071350_58071464_58077891
ENSMUSG00000022359.11_0	chr15	+	1363	6	FSM	ENSMUSG00000022359.11	ENSMUST00000067563.9	1383	6	8	12	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAATTAATTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58004780	58022038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58004978_58011729_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297
ENSMUSG00000022359.11_3	chr15	+	1102	6	FSM	ENSMUSG00000022359.11	ENST00000287387.7	1113	6	7	4	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGTGCCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	58011735	58022061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58011830_58014001_58014053_58015992_58016142_58016975_58017101_58021297_58021563_58021643
ENSMUSG00000022359.11_7	chr15	+	818	4	FSM	ENSMUSG00000022359.11	ENST00000518125.1	830	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGACTTAAAATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	58014013	58022032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58014053_58016975_58017101_58021297_58021563_58021643
ENSMUSG00000022359.11_8	chr15	+	777	3	ISM	ENSMUSG00000022359.11	ENST00000518125.1	830	4	2970	6	2970	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAATTAATTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58016983	58022038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_58017101_58021297_58021563_58021643
ENSMUSG00000022360.9_0	chr15	-	5660	28	FSM	ENSMUSG00000022360.9	ENSMUST00000038194.5	5684	28	16	8	16	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTTACTCGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57998462	57957449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57958968_57959972_57960102_57960647_57960782_57961754_57962145_57963106_57963251_57963362_57963486_57965772_57965933_57966593_57966791_57967826_57967963_57968872_57969059_57970120_57970308_57971476_57971592_57971698_57972014_57973343_57973435_57974512_57974673_57977565_57977655_57979067_57979243_57980163_57980280_57980633_57980743_57981740_57981846_57984337_57984456_57985848_57985999_57989137_57989226_57989443_57989547_57989944_57990111_57991604_57991652_57995588_57995738_57998202
ENSMUSG00000022361.15_0	chr15	-	4742	4	FSM	ENSMUSG00000022361.15	ENSMUST00000070143.13	4764	4	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCATTGCTAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	57939850	57910707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57912182_57915619_57918479_57932714_57932826_57939552
ENSMUSG00000022362.14_0	chr15	-	1315	4	FSM	ENSMUSG00000022362.14	ENSMUST00000176935.8	1326	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTCCAAAACAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	57939815	57891643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57892441_57894352_57894497_57932714_57932826_57939552
ENSMUSG00000022364.15_0	chr15	+	3294	21	FSM	ENSMUSG00000022364.15	ENSMUST00000022992.13	3311	21	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATCAAAGCTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	57775606	57833452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57827199_57827321_57831304_57831401_57833119
ENSMUSG00000022364.15_18	chr15	+	2779	19	FSM	ENSMUSG00000022364.15	ENST00000521676.5	2789	19	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57775708	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805982_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_24	chr15	+	2830	19	FSM	ENSMUSG00000022364.15	ENST00000522420.5	2843	19	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57775711	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57775788_57779365_57779513_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_47	chr15	+	2871	19	ISM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	3660	6	3660	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57779364	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_64	chr15	+	1733	13	FSM	ENSMUSG00000022364.15	ENST00000518805.5	1739	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57801443	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_69	chr15	+	1673	12	ISM	ENSMUSG00000022364.15	ENST00000518805.5	1739	13	2580	6	2580	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57804023	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816887_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022364.15_7	chr15	+	2948	20	FSM	ENSMUSG00000022364.15	ENST00000287380.6	2959	20	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGAAGGTGAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	57775709	57827311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57775788_57779365_57779513_57783326_57783443_57786352_57786532_57795927_57796080_57799486_57799647_57801297_57801499_57804018_57804196_57805765_57805846_57805928_57806076_57812344_57812479_57814370_57814505_57815028_57815209_57816151_57816385_57816883_57817037_57818668_57818805_57821732_57821826_57824238_57824380_57825464_57825660_57827199
ENSMUSG00000022365.7_0	chr15	-	3161	8	FSM	ENSMUSG00000022365.7	ENSMUST00000022993.7	3175	8	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	2643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGAAAAAGATGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	57755834	57732901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57741880_57741977_57742444_57742472_57743395_57743461_57746830_57746943_57755538
ENSMUSG00000022365.7_11	chr15	-	891	4	FSM	ENSMUSG00000022365.7	ENST00000419562.6	903	4	7	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAATAATGAGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	57755844	57734881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57735303_57738892_57739004_57740813_57740867_57755538
ENSMUSG00000022367.8_0	chr15	-	4233	4	FSM	ENSMUSG00000022367.8	ENSMUST00000050544.8	4237	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGATGATGGTCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56557935	56529026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_56531985_56533284_56533387_56544973_56545601_56557389
ENSMUSG00000022369.14_0	chr15	+	3132	22	FSM	ENSMUSG00000022369.14	ENSMUST00000022998.14	3144	22	8	4	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTCTTGGATTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	55420811	55489815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_55421134_55421896_55421978_55426098_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432556_55434690_55434786_55436291_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786_55488853_55489533
ENSMUSG00000022369.14_14	chr15	+	2387	18	ISM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	234	4	234	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAGTAATTCTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	55426334	55488850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786
ENSMUSG00000022369.14_4	chr15	+	2459	19	FSM	ENSMUSG00000022369.14	ENST00000305949.6	2465	19	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAGTAATTCTCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	55426102	55488850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_55426173_55426332_55426485_55428008_55428068_55429589_55429735_55430573_55430692_55432441_55432576_55434690_55434786_55436293_55436365_55440843_55440962_55449706_55449881_55452051_55452160_55460737_55460900_55466579_55466698_55470039_55470196_55474333_55474430_55480877_55481145_55483033_55483272_55484018_55484133_55488786
ENSMUSG00000022370.14_0	chr15	-	1206	7	FSM	ENSMUSG00000022370.14	ENSMUST00000172387.8	1223	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCAATGTCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55421132	55397494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_55397734_55402425_55402548_55403518_55403606_55406719_55406781_55411537_55411632_55418715_55418840_55420653
ENSMUSG00000022371.17_0	chr15	+	6026	48	FSM	ENSMUSG00000022371.17	ENST00000309791.8	6046	48	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAAACATCCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	55171230	55383057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_55171381_55192551_55192677_55201801_55201919_55205076_55205221_55208265_55208356_55225777_55225934_55226846_55226967_55229444_55229610_55235967_55236130_55242895_55243048_55244122_55244253_55245821_55245968_55249608_55249739_55251945_55252086_55270030_55270158_55271115_55271256_55272211_55272345_55273572_55273633_55274965_55275118_55282083_55282214_55284213_55284337_55286776_55286927_55291279_55291397_55300336_55300484_55304695_55304753_55307948_55308089_55309132_55309257_55309549_55309694_55310760_55310926_55311593_55311633_55312127_55312267_55313195_55313339_55315667_55315778_55318573_55318733_55327081_55327160_55329993_55330081_55331355_55331410_55335016_55335113_55336322_55336377_55336675_55336730_55351327_55351382_55351861_55351934_55360873_55360910_55361811_55361879_55364774_55364964_55379559_55379638_55381577_55381734_55382532
ENSMUSG00000022372.15_0	chr15	-	536	4	FSM	ENSMUSG00000022372.15	ENST00000517648.5	546	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAGATTAATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	66664157	66654404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66654605_66655457_66655606_66661530_66661635_66664073
ENSMUSG00000022372.15_1	chr15	-	453	3	ISM	ENSMUSG00000022372.15	ENST00000517648.5	546	4	2525	7	2525	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGAAGATTAATGACCT	NA	NA	NA	NA	NA	NA	NA	NA	66661635	66654404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_66654605_66655457_66655606_66661530
ENSMUSG00000022377.17_0	chr15	-	5297	31	FSM	ENSMUSG00000022377.17	ENST00000518721.6	5316	31	12	7	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCATCTGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	64254655	63958710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63959154_63960028_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254494
ENSMUSG00000022377.17_27	chr15	-	4387	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177083.8	4415	28	18	10	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAACAATGCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	64184470	63960394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ENSMUSG00000022377.17_28	chr15	-	4541	30	NIC	ENSMUSG00000022377.17	novel	4582	31	NA	NA	22	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGCAACAATGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64254746	63960397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUSG00000022377.17_36	chr15	-	4515	30	FSM	ENSMUSG00000022377.17	ENSMUST00000110115.9	4535	30	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGCAACAATGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64254756	63960397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUSG00000022377.17_38	chr15	-	4558	30	NIC	ENSMUSG00000022377.17	novel	4580	31	NA	NA	9	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTGCAACAATGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64254759	63960397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030726_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64221676_64221763_64254565
ENSMUSG00000022377.17_4	chr15	-	5398	32	FSM	ENSMUSG00000022377.17	ENST00000357668.2	5412	32	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCATCTGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	64254644	63958710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63959154_63960028_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030766_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197_64184325_64187111_64187224_64221676_64221763_64254494
ENSMUSG00000022377.17_7	chr15	-	6143	28	FSM	ENSMUSG00000022377.17	ENSMUST00000177371.8	6164	28	16	5	16	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCATCTGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	64184506	63958710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63961371_63963896_63964020_63965857_63966358_63971380_63971440_63974251_63974322_63982754_63982926_63991806_63992036_63993856_63993965_63995520_63995589_63995713_63995830_63996163_63996250_63996566_63996754_63999220_63999313_64001019_64001154_64001952_64002117_64007654_64007704_64009802_64009891_64021454_64021525_64024678_64024780_64030730_64030854_64032070_64032147_64038308_64038395_64039548_64039679_64044533_64044584_64045066_64045142_64063332_64063479_64080332_64080406_64184197
ENSMUSG00000022378.15_0	chr15	-	3783	12	FSM	ENSMUSG00000022378.15	ENSMUST00000063838.11	3797	12	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACATAGCCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	63932290	63800952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63932043
ENSMUSG00000022378.15_5	chr15	-	1891	13	FSM	ENSMUSG00000022378.15	ENSMUST00000228226.2	1896	13	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	63932187	63802792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63894418_63894470_63932043
ENSMUSG00000022378.15_6	chr15	-	1697	11	ISM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	27000	2	27000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	63842818	63802792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778
ENSMUSG00000022378.15_7	chr15	-	1763	12	FSM	ENSMUSG00000022378.15	ENSMUST00000164532.3	1770	12	5	2	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGGCTTGGTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	63869813	63802792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_63803529_63807427_63807499_63809146_63809274_63810512_63810593_63811493_63811611_63813779_63813858_63815032_63815170_63816171_63816278_63821854_63821977_63828448_63828532_63842778_63842818_63869746
ENSMUSG00000022385.12_0	chr15	+	2630	12	FSM	ENSMUSG00000022385.12	ENSMUST00000170629.3	2641	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTTAAATTAAATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	85743945	85760720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85743996_85744204_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUSG00000022385.12_1	chr15	+	2644	11	FSM	ENSMUSG00000022385.12	ENSMUST00000231074.2	2692	11	40	8	40	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGACATTTGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	85744186	85760766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85744297_85746101_85746160_85746268_85746897_85748307_85748464_85751675_85751803_85752880_85753259_85755709_85755783_85757840_85758078_85759175_85759420_85759736_85759953_85760349
ENSMUSG00000022386.13_0	chr15	+	1506	11	FSM	ENSMUSG00000022386.13	ENSMUST00000023019.12	1526	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGACCATGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85763533	85781586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85763660_85766874_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781035_85781119_85781225
ENSMUSG00000022386.13_1	chr15	+	1051	9	FSM	ENSMUSG00000022386.13	ENST00000643137.1	1071	9	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCTGCACCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	85766885	85781351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85767041_85769286_85769394_85774405_85774529_85776767_85776941_85778026_85778081_85778154_85778222_85779126_85779228_85780560_85780706_85781225
ENSMUSG00000022387.18_0	chr15	-	5137	13	FSM	ENSMUSG00000022387.18	ENSMUST00000109381.9	5152	13	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTGTCCCGTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88618422	88571237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88572684_88573711_88573867_88574064_88574175_88575410_88575539_88575951_88576088_88584975_88585474_88591236_88591498_88596818_88597132_88597500_88597630_88598088_88598221_88601108_88601266_88613526_88614908_88618131
ENSMUSG00000022389.16_0	chr15	+	4379	4	FSM	ENSMUSG00000022389.16	ENSMUST00000109553.10	4403	4	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGAGAACTTGGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	81686636	81711055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81687088_81699144_81699463_81705399_81705621_81707666
ENSMUSG00000022390.12_0	chr15	+	5721	23	FSM	ENSMUSG00000022390.12	ENSMUST00000109554.3	5740	23	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTTGCTTCTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	81629267	81680452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81629548_81652195_81652255_81653033_81653068_81653184_81653383_81655938_81656098_81656628_81656710_81657486_81657544_81660006_81660050_81660478_81660673_81660981_81661304_81662073_81662133_81662810_81662911_81663309_81663472_81664604_81664811_81666159_81666261_81667225_81667408_81670082_81670169_81676132_81676267_81676430_81676537_81676663_81676773_81676980_81677115_81677220_81677385_81677701
ENSMUSG00000022391.17_0	chr15	-	2974	17	FSM	ENSMUSG00000022391.17	ENSMUST00000170134.9	2984	17	4	6	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCCCGGAAGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	81614098	81588454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613417_81613466_81613912
ENSMUSG00000022391.17_1	chr15	-	3015	16	FSM	ENSMUSG00000022391.17	ENSMUST00000052374.13	3033	16	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCAGAGGCCCGGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	81614193	81588460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81589460_81589653_81589776_81589860_81589950_81590601_81590705_81593687_81593808_81594561_81594755_81595674_81595760_81595842_81595943_81596222_81596337_81597019_81597179_81600767_81600903_81602943_81603124_81604807_81604868_81606099_81606228_81608686_81608834_81613912
ENSMUSG00000022394.15_0	chr15	+	3471	17	FSM	ENSMUSG00000022394.15	ENSMUST00000023029.15	3487	17	6	10	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	NA	NA	NA	NA	NA	NA	NA	81548095	81572506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140
ENSMUSG00000022394.15_4	chr15	+	2578	18	FSM	ENSMUSG00000022394.15	ENSMUST00000174229.8	2578	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACAATGTGATGATA	NA	NA	NA	NA	NA	NA	NA	NA	81548134	81572506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81548226_81551359_81551598_81552830_81552965_81554327_81554452_81555268_81555349_81559715_81559834_81560458_81560594_81561025_81561115_81566120_81566353_81566771_81566849_81567153_81567259_81568043_81568192_81568501_81568585_81568914_81569150_81569581_81569648_81570411_81570523_81571140_81571193_81572046
ENSMUSG00000022400.10_0	chr15	+	1660	5	FSM	ENSMUSG00000022400.10	ENSMUST00000023036.7	1675	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTCCTTTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	81350505	81360564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81350652_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022400.10_10	chr15	+	640	5	FSM	ENSMUSG00000022400.10	ENSMUST00000230062.2	651	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGTCACGAGGAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	81350847	81359582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81350956_81352355_81352435_81355152_81355224_81358043_81358130_81359286
ENSMUSG00000022401.13_0	chr15	+	6042	10	FSM	ENSMUSG00000022401.13	ENSMUST00000163754.9	6058	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGGCGTGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	81284349	81341678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81332519_81332698_81335101_81335223_81337065
ENSMUSG00000022401.13_6	chr15	+	3221	9	FSM	ENSMUSG00000022401.13	ENSMUST00000041609.11	3236	9	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAATCCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	81284388	81339074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81284489_81298632_81298750_81311476_81311885_81314890_81315094_81320914_81320978_81322267_81322382_81326579_81326666_81335101_81335223_81337065
ENSMUSG00000022403.16_1	chr15	-	3329	12	FSM	ENSMUSG00000022403.16	ENSMUST00000172107.8	3346	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	8125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGATCTTGACCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	81284234	81247876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81249780_81250547_81250691_81253594_81253644_81255658_81255776_81259004_81259108_81261888_81262000_81262116_81262202_81267180_81267248_81272530_81272602_81273851_81273925_81276465_81276524_81283685
ENSMUSG00000022404.9_1	chr15	-	1702	9	FSM	ENSMUSG00000022404.9	ENSMUST00000023040.9	1724	9	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAAACATTCATGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	81245003	81203123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81203978_81207810_81207894_81211241_81211338_81211417_81211564_81213250_81213368_81222136_81222289_81224174_81224242_81228301_81228363_81244877
ENSMUSG00000022407.11_0	chr15	+	3698	13	FSM	ENSMUSG00000022407.11	ENSMUST00000023043.10	3711	13	11	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGCCAGAGGTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	80832701	80855145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80847860_80847931_80848080_80848229_80850292_80850384_80851312_80851403_80851789_80851967_80852862
ENSMUSG00000022407.11_12	chr15	+	1006	9	FSM	ENSMUSG00000022407.11	ENST00000623632.4	1025	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAATGTCCAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80832796	80851961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80832902_80836397_80836602_80839820_80839866_80840413_80840494_80844595_80844768_80845556_80845604_80846896_80846988_80851312_80851403_80851789
ENSMUSG00000022412.15_0	chr15	+	5136	6	FSM	ENSMUSG00000022412.15	ENSMUST00000023048.12	5148	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCTGACGTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	80118225	80137567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80118383_80120005_80120355_80130937_80131089_80132074_80132253_80132441_80132705_80133529
ENSMUSG00000022414.9_0	chr15	+	2952	11	FSM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTAAAGATGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	80017329	80045898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80017390_80032427_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022414.9_1	chr15	+	2889	10	ISM	ENSMUSG00000022414.9	ENSMUST00000023050.9	2964	11	15103	10	15103	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGTAAAGATGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	80032430	80045898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_80032565_80032887_80033042_80033982_80034070_80034627_80034767_80036865_80036980_80037832_80037945_80039957_80040103_80041804_80042028_80042951_80043109_80044274
ENSMUSG00000022415.13_0	chr15	+	1265	5	FSM	ENSMUSG00000022415.13	ENST00000318801.8	1281	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCATTCATTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79975520	79998212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366_79997851_79997988
ENSMUSG00000022415.13_6	chr15	+	800	4	FSM	ENSMUSG00000022415.13	ENSMUST00000009728.13	819	4	11	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCTATTTTGTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79975545	79997634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79975694_79994644_79994883_79995799_79995946_79997366
ENSMUSG00000022419.17_0	chr15	+	8529	9	FSM	ENSMUSG00000022419.17	ENSMUST00000096433.10	8547	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACCAAGTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	54975722	55122659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_54976016_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ENSMUSG00000022419.17_3	chr15	+	3281	9	FSM	ENSMUSG00000022419.17	ENSMUST00000023056.8	3300	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCTTATGGTTACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54996844	55117592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_54996957_55012736_55012916_55015183_55015308_55044260_55044440_55072126_55072313_55075587_55075723_55078883_55078955_55081564_55081670_55115402
ENSMUSG00000022420.17_0	chr15	-	1449	4	FSM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACGACCAAAAACTAAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	79658661	79645669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79646727_79647710_79647795_79649016_79649223_79658559
ENSMUSG00000022420.17_1	chr15	-	1354	3	ISM	ENSMUSG00000022420.17	ENSMUST00000023055.8	1472	4	9442	13	9358	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAAACTAAACTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79649226	79645666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79646727_79647710_79647795_79649016
ENSMUSG00000022421.21_0	chr15	-	4948	5	FSM	ENSMUSG00000022421.21	ENSMUST00000175858.10	4948	5	-6	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGGAGGAGGCTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	79688916	79670558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79674118_79674466_79674647_79676803_79677052_79678456_79678677_79688175
ENSMUSG00000022422.14_0	chr15	-	1313	9	FSM	ENSMUSG00000022422.14	ENSMUST00000023059.13	1324	9	8	3	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	54953879	54939497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ENSMUSG00000022422.14_1	chr15	-	1499	10	FSM	ENSMUSG00000022422.14	ENSMUST00000110231.2	1499	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTTATCCCTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	54953876	54939497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_54939662_54943588_54943738_54945562_54945718_54946441_54946495_54946800_54946990_54947444_54947584_54950148_54950240_54950997_54951133_54952350_54952520_54953621
ENSMUSG00000022425.17_4	chr15	-	1711	14	FSM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATCTGACATATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	54736818	54702622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_54702933_54707774_54707932_54709208_54709342_54710644_54710723_54711570_54711707_54713386_54713524_54723438_54723491_54725905_54726079_54727133_54727222_54727379_54727468_54729307_54729436_54730124_54730157_54733598_54733725_54736745
ENSMUSG00000022425.17_6	chr15	-	1635	13	ISM	ENSMUSG00000022425.17	ENST00000522167.5	1715	14	3101	0	3101	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAATCTGACATATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	54733721	54702622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_54702933_54707774_54707932_54709208_54709342_54710644_54710723_54711570_54711707_54713386_54713524_54723438_54723491_54725905_54726079_54727133_54727222_54727379_54727468_54729307_54729436_54730124_54730157_54733598
ENSMUSG00000022426.7_0	chr15	-	2309	5	FSM	ENSMUSG00000022426.7	ENST00000683374.1	2318	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTAAAAACCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	79571688	79558433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79559207_79559923_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUSG00000022426.7_1	chr15	-	3420	4	FSM	ENSMUSG00000022426.7	ENSMUST00000023061.7	3440	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTGAACACAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	79572110	79558461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79560381_79561297_79561493_79561599_79561729_79570933
ENSMUSG00000022427.5_0	chr15	+	1555	4	FSM	ENSMUSG00000022427.5	ENSMUST00000023062.5	1569	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATTCTTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	79555071	79557597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79555210_79555373_79555493_79556097_79556216_79556417
ENSMUSG00000022428.9_0	chr15	+	1136	5	FSM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCTCTGTGTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79543405	79551856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79543495_79545571_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUSG00000022428.9_1	chr15	+	1049	4	ISM	ENSMUSG00000022428.9	ENSMUST00000023064.9	1147	5	2170	5	2170	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCTCTGTGTAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	79545569	79551856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_79545726_79549846_79549953_79550031_79550151_79551188
ENSMUSG00000022432.8_0	chr15	-	3794	26	FSM	ENSMUSG00000022432.8	ENST00000357450.9	3804	26	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAGCTAGTTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	85016152	84944008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_84944047_84949167_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ENSMUSG00000022432.8_34	chr15	-	3746	25	FSM	ENSMUSG00000022432.8	ENSMUST00000023068.8	4047	25	23	278	20	-278	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAAATGAGTATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	85016142	84949167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_84949307_84950419_84950531_84951937_84952008_84953845_84953998_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ENSMUSG00000022432.8_41	chr15	-	3382	22	FSM	ENSMUSG00000022432.8	ENST00000404354.3	3405	22	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGAGGTAAGAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	85016147	84950427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_84950531_84954980_84955136_84955782_84955940_84970293_84970390_84973792_84973947_84975072_84975219_84976143_84976286_84980846_84980954_84981705_84981823_84982096_84982235_84991118_84991266_84994852_84995033_84996887_84997074_84998879_84999088_85000039_85000123_85004818_85004960_85005789_85006049_85007921_85008161_85011668_85011873_85011959_85012073_85013871_85014061_85016029
ENSMUSG00000022433.22_0	chr15	-	2681	11	FSM	ENSMUSG00000022433.22	ENSMUST00000117786.9	2695	11	3	11	3	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGATATAGATACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	79326197	79302066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323056_79326127
ENSMUSG00000022433.22_1	chr15	-	1308	10	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	3151	1	2966	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	79323052	79303366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971
ENSMUSG00000022433.22_11	chr15	-	1370	10	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	0	739	0	-739	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTGGTGTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	79326203	79304104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ENSMUSG00000022433.22_13	chr15	-	1279	9	ISM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	3159	739	2974	-739	internal_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTACTGGTGTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	79323044	79304104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971
ENSMUSG00000022433.22_16	chr15	-	3164	9	FSM	ENSMUSG00000022433.22	ENSMUST00000122044.8	3174	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTCGCTGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79326018	79306690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79308256_79308351_79308456_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79325420
ENSMUSG00000022433.22_8	chr15	-	1384	11	FSM	ENSMUSG00000022433.22	ENSMUST00000120859.9	1392	11	7	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	79326196	79303366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79303388_79304104_79304169_79304783_79304924_79305017_79305211_79309039_79309189_79309699_79309871_79310458_79310688_79313911_79314061_79314254_79314366_79322971_79323060_79326127
ENSMUSG00000022434.9_0	chr15	+	2499	9	FSM	ENSMUSG00000022434.9	ENSMUST00000023069.9	2518	9	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCAACCCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	84921300	84947023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84921446_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUSG00000022434.9_6	chr15	+	2592	9	FSM	ENSMUSG00000022434.9	ENSMUST00000229203.2	2605	9	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCAACCCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	84926947	84947023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84927186_84928980_84929037_84929820_84930074_84932559_84932782_84934894_84935024_84937771_84938058_84939854_84939888_84942942_84943027_84945732
ENSMUSG00000022435.7_0	chr15	+	508	4	FSM	ENSMUSG00000022435.7	ENST00000396082.2	516	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGAAACAAGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	84901405	84906590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84901473_84902226_84902383_84905463_84905597_84906438
ENSMUSG00000022435.7_2	chr15	+	441	3	ISM	ENSMUSG00000022435.7	ENST00000396082.2	516	4	821	8	821	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACTGAAACAAGCCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	84902226	84906590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_84902383_84905463_84905597_84906438
ENSMUSG00000022436.17_0	chr15	+	1911	18	FSM	ENSMUSG00000022436.17	ENSMUST00000109698.9	1923	18	1	11	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	78783968	78796240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78796129
ENSMUSG00000022436.17_1	chr15	+	2363	18	FSM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAACAGGAGTAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	78784107	78796240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78784162_78785345_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ENSMUSG00000022436.17_2	chr15	+	2304	17	ISM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	1247	8	1247	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAAAACAGGAGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	78785349	78796239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_78785389_78785598_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ENSMUSG00000022436.17_3	chr15	+	2264	16	ISM	ENSMUSG00000022436.17	ENSMUST00000001226.11	2375	18	1493	12	1493	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAACAAAACAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	78785595	78796235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_78785704_78786754_78786832_78787053_78787166_78787258_78787336_78787752_78787898_78788469_78788539_78788663_78788755_78789229_78789376_78789970_78790083_78790455_78790538_78790622_78790704_78791413_78791531_78792160_78792259_78792552_78792713_78794207_78794300_78795538
ENSMUSG00000022437.8_0	chr15	+	4610	15	FSM	ENSMUSG00000022437.8	ENSMUST00000023071.8	4629	15	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGACATTAATACCATCG	NA	NA	NA	NA	NA	NA	NA	NA	84076450	84101458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84076586_84079944_84080056_84081205_84081308_84082774_84082863_84083973_84084081_84084493_84084625_84084830_84084919_84086430_84086560_84086969_84087042_84088209_84088297_84091071_84091143_84092033_84092102_84094684_84094832_84095237_84095380_84098326
ENSMUSG00000022438.7_0	chr15	+	3762	13	FSM	ENSMUSG00000022438.7	ENSMUST00000023072.7	3784	13	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCCGGCTGTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84116257	84199881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84116388_84155431_84155522_84157699_84157771_84166962_84167066_84174587_84174729_84176982_84177099_84179757_84179817_84182166_84182187_84187608_84187671_84188035_84188105_84193053_84193156_84196903_84196977_84197155
ENSMUSG00000022440.10_0	chr15	-	2392	3	FSM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCTGGTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78413817	78407547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78409599_78411427_78411669_78413717
ENSMUSG00000022440.10_1	chr15	-	2291	2	ISM	ENSMUSG00000022440.10	ENSMUST00000023075.9	2402	3	2156	4	2123	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTCAGCCTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	78411669	78407549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_78409599_78411427
ENSMUSG00000022440.10_2	chr15	-	2127	3	ISM	ENSMUSG00000022440.10	ENSMUST00000229185.2	2201	4	2123	0	2123	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCTGGTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78411669	78407547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_78409388_78409553_78409599_78411427
ENSMUSG00000022440.10_3	chr15	-	2183	4	FSM	ENSMUSG00000022440.10	ENSMUST00000229185.2	2201	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGCCTGGTACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78413774	78407547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78409388_78409553_78409599_78411427_78411669_78413717
ENSMUSG00000022442.17_4	chr15	-	2046	12	FSM	ENSMUSG00000022442.17	ENSMUST00000016897.12	2060	12	8	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACATCTGACTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	83395086	83367975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83368515_83373669_83373834_83376743_83376831_83380472_83380617_83381520_83381630_83382352_83382488_83384122_83384304_83386281_83386491_83389450_83389568_83389683_83389845_83390480_83390529_83394934
ENSMUSG00000022443.18_0	chr15	-	7424	41	FSM	ENSMUSG00000022443.18	ENSMUST00000016771.13	7433	41	7	2	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77726368	77644788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680255_77681200_77681229_77692067_77692225_77697079_77697432_77726156
ENSMUSG00000022443.18_1	chr15	-	7360	40	FSM	ENSMUSG00000022443.18	ENST00000216181.11	7372	40	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTGGTGTCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77726306	77644788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77646217_77647151_77647325_77647421_77647531_77647991_77648201_77648499_77648624_77648704_77648794_77649899_77650029_77650913_77651076_77651330_77651544_77651650_77651864_77652991_77653241_77653400_77653554_77653704_77653810_77653966_77654174_77655324_77655470_77656023_77656237_77657471_77657644_77658134_77658259_77658756_77658895_77659273_77659481_77660002_77660135_77661090_77661200_77661967_77662129_77664189_77664260_77665310_77665433_77665521_77665716_77667588_77667704_77669292_77669467_77670686_77670861_77671709_77671863_77673118_77673238_77674067_77674164_77674903_77675048_77675247_77675347_77675915_77675980_77676453_77676547_77680160_77680281_77692067_77692225_77697079_77697432_77726156
ENSMUSG00000022443.18_33	chr15	-	611	3	FSM	ENSMUSG00000022443.18	ENST00000401701.1	630	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGAGTGGCTGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	77697418	77680165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77680281_77692067_77692225_77697079
ENSMUSG00000022449.15_0	chr15	-	5793	38	FSM	ENSMUSG00000022449.15	ENST00000389420.8	5808	38	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCCACAGGTCCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94302152	94171108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_94171196_94177875_94177968_94179766_94179901_94180353_94180446_94180531_94180627_94180826_94180957_94181708_94181910_94183518_94183690_94184190_94184365_94189414_94189583_94220662_94220837_94222540_94222703_94223793_94224085_94224186_94224352_94225619_94225728_94226682_94226803_94227796_94227962_94228361_94228527_94229198_94229410_94231479_94231607_94236288_94236419_94236567_94236735_94238932_94239029_94241818_94241937_94243557_94243695_94243792_94243975_94245549_94245696_94246981_94247087_94249515_94249658_94251427_94251575_94253162_94253267_94258454_94258496_94259633_94259759_94260399_94260484_94277605_94277845_94292492_94292656_94301069_94301432_94301879
ENSMUSG00000022450.7_0	chr15	-	578	3	FSM	ENSMUSG00000022450.7	ENSMUST00000023085.7	590	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGGTCTCTCTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	82238511	82234340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82234573_82235179_82235296_82238281
ENSMUSG00000022451.13_0	chr15	-	3014	9	FSM	ENSMUSG00000022451.13	ENSMUST00000023087.13	3025	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTGTATGTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	94487749	94475831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_94477872_94478824_94478947_94479097_94479249_94480630_94480757_94482261_94482367_94483328_94483425_94484238_94484418_94486108_94486187_94487632
ENSMUSG00000022452.17_0	chr15	+	688	3	FSM	ENSMUSG00000022452.17	ENSMUST00000023086.15	705	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGCAGGCTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	82230165	82233285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82230471_82232100_82232242_82233043
ENSMUSG00000022453.9_0	chr15	-	1906	10	FSM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACCAGGGTACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	82223024	82213736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438_82222516_82222952
ENSMUSG00000022453.9_1	chr15	-	1832	9	ISM	ENSMUSG00000022453.9	ENSMUST00000023088.8	1913	10	514	4	470	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACCAGGGTACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	82222513	82213736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_82214409_82214855_82215000_82216533_82216732_82218986_82219149_82219697_82219793_82220043_82220222_82220970_82221143_82221587_82221724_82222438
ENSMUSG00000022454.18_0	chr15	-	3143	21	FSM	ENSMUSG00000022454.18	ENSMUST00000229933.2	3152	21	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACGCATTAAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	95426437	94973116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_94973748_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425681_95425768_95426356
ENSMUSG00000022454.18_3	chr15	-	3174	20	FSM	ENSMUSG00000022454.18	ENST00000395487.6	3190	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTACGCCATGCGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	95425566	95117336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_95118036_95126964_95127190_95129177_95129355_95130364_95130559_95139417_95139559_95194039_95194136_95196738_95196862_95244642_95244769_95272608_95272738_95281506_95281610_95282945_95283038_95327758_95327862_95329419_95329549_95330475_95330559_95330731_95330805_95332942_95333040_95333137_95333312_95371389_95371541_95425157_95425287_95425436
ENSMUSG00000022456.19_0	chr15	+	2568	11	FSM	ENSMUSG00000022456.19	ENST00000396426.7	2586	11	10	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGGCCTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	82159441	82178767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82159688_82163615_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_5	chr15	+	1839	10	FSM	ENSMUSG00000022456.19	ENST00000406029.5	1859	10	14	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTTTATACATTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	82159479	82178268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82159688_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022456.19_8	chr15	+	2315	10	FSM	ENSMUSG00000022456.19	ENST00000644076.1	2332	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATAATGGCCTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	82163622	82178767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82163808_82167259_82167389_82167877_82167960_82168572_82168711_82169987_82170106_82170637_82170734_82173395_82173496_82174604_82174657_82174938_82175033_82177446
ENSMUSG00000022462.8_0	chr15	-	4644	16	FSM	ENSMUSG00000022462.8	ENSMUST00000023099.8	4660	16	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATCAATCCTCAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	96597604	96585281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96588110_96588989_96589088_96589177_96589323_96589559_96589685_96590194_96590296_96590398_96590479_96590897_96591057_96591161_96591221_96591436_96591520_96592893_96592976_96593096_96593190_96593316_96593391_96595802_96595919_96596062_96596145_96596495_96596699_96597288
ENSMUSG00000022463.9_0	chr15	+	5056	19	FSM	ENSMUSG00000022463.9	ENSMUST00000023100.8	5077	19	12	9	-11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCTAACACAAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82031393	82089571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82031692_82053938_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897
ENSMUSG00000022463.9_6	chr15	+	4028	21	FSM	ENSMUSG00000022463.9	ENSMUST00000229336.2	4040	21	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATTTAATTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82031408	82088868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82031692_82053938_82054020_82054139_82054356_82055302_82055485_82056953_82057101_82059297_82059520_82061356_82061472_82061606_82061789_82062917_82063111_82063566_82063749_82066181_82066459_82069464_82069635_82076406_82076576_82078245_82078364_82079115_82079226_82080360_82080494_82081818_82081988_82083835_82084022_82087385_82087498_82087897_82088038_82088227
ENSMUSG00000022466.7_1	chr15	-	2259	17	FSM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAGGGTCGATAT	NA	NA	NA	NA	NA	NA	NA	NA	97603701	97572984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082_97601251_97603630
ENSMUSG00000022466.7_2	chr15	-	2186	16	ISM	ENSMUSG00000022466.7	ENSMUST00000023104.7	2271	17	2458	7	2458	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTATAAGGGTCGATAT	NA	NA	NA	NA	NA	NA	NA	NA	97601248	97572984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_97573261_97576266_97576368_97576950_97577049_97578215_97578403_97579499_97579721_97581707_97581807_97581913_97581985_97584322_97584445_97585991_97586120_97589062_97589192_97591094_97591166_97591984_97592107_97594378_97594507_97596796_97596920_97598948_97599093_97601082
ENSMUSG00000022468.13_1	chr15	-	1179	8	FSM	ENSMUSG00000022468.13	ENST00000545824.2	1196	8	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCAGAGGGACAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	97629252	97609905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97610051_97610838_97610982_97611661_97611769_97612376_97612491_97616641_97616842_97617394_97617567_97618000_97618142_97629095
ENSMUSG00000022469.18_0	chr15	-	3972	28	FSM	ENSMUSG00000022469.18	ENSMUST00000126854.9	4005	28	26	7	-22	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97665701	97642657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648069_97648149_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ENSMUSG00000022469.18_4	chr15	-	3712	28	FSM	ENSMUSG00000022469.18	ENSMUST00000129223.9	3750	28	23	15	23	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACAAAGATACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97665656	97642848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97643548_97644938_97645011_97645103_97645159_97646093_97646159_97646463_97646552_97647376_97647428_97647531_97647623_97647886_97648036_97648140_97648276_97648671_97648770_97651657_97651805_97652118_97652201_97654481_97654522_97655059_97655143_97655230_97655391_97655563_97655643_97655897_97655987_97656271_97656385_97656722_97656870_97657042_97657120_97657205_97657267_97657845_97657931_97658459_97658629_97658988_97659111_97659355_97659463_97659559_97659614_97664642_97664856_97665275
ENSMUSG00000022471.15_3	chr15	+	2097	13	FSM	ENSMUSG00000022471.15	ENSMUST00000069530.13	2114	13	10	7	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTATACTGTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	81900579	81924279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81900677_81901310_81901400_81903181_81903295_81906645_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022471.15_8	chr15	+	1664	11	FSM	ENSMUSG00000022471.15	ENST00000420392.1	1680	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTAGATGCTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	81903189	81924078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81903295_81906683_81906785_81907007_81907263_81909705_81909890_81911425_81911613_81913322_81913492_81913763_81913926_81915333_81915464_81919877_81919979_81921657_81921772_81923922
ENSMUSG00000022472.17_0	chr15	-	2920	6	FSM	ENSMUSG00000022472.17	ENSMUST00000152227.8	2934	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTAAGTTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	81900350	81876723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81879047_81882310_81882434_81883705_81883816_81886741_81886812_81887958_81887981_81900078
ENSMUSG00000022474.16_1	chr15	-	1282	8	FSM	ENSMUSG00000022474.16	ENSMUST00000023112.12	1300	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTGTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81845120	81835315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81835814_81836124_81836241_81836925_81837002_81839849_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022474.16_6	chr15	-	600	5	FSM	ENSMUSG00000022474.16	ENSMUST00000230229.2	612	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGACACCTACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81845029	81839750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81839950_81840369_81840462_81840562_81840640_81841993_81842112_81844915
ENSMUSG00000022475.20_0	chr15	-	3951	25	FSM	ENSMUSG00000022475.20	ENSMUST00000079838.14	3985	25	34	0	34	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTCCTTGGGAGAACGCC	NA	NA	NA	NA	NA	NA	NA	NA	97729341	97690544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705649_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707849_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ENSMUSG00000022475.20_4	chr15	-	3751	23	FSM	ENSMUSG00000022475.20	ENSMUST00000121514.8	3767	23	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGAACAATATATGTT	NA	NA	NA	NA	NA	NA	NA	NA	97712735	97690575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97712589
ENSMUSG00000022475.20_5	chr15	-	4214	24	FSM	ENSMUSG00000022475.20	ENSMUST00000088402.12	4223	24	2	7	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATATATGTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	97729646	97690568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97729239
ENSMUSG00000022475.20_6	chr15	-	3883	24	FSM	ENSMUSG00000022475.20	ENSMUST00000119670.8	3899	24	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATATATGTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	97742134	97690568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706847_97706940_97707281_97707408_97707804_97707849_97708733_97708846_97709143_97709235_97709318_97709510_97741986
ENSMUSG00000022475.20_7	chr15	-	4086	25	FSM	ENSMUSG00000022475.20	ENSMUST00000116409.9	4113	25	8	19	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACAAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	97742175	97690589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705670_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97741986
ENSMUSG00000022475.20_8	chr15	-	4049	26	FSM	ENSMUSG00000022475.20	ENSMUST00000118294.8	4069	26	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAAAAGTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	97729371	97690605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97691624_97691810_97691947_97693627_97693713_97693978_97694113_97694713_97694833_97695821_97695920_97696104_97696225_97697437_97697526_97697641_97697698_97698575_97698684_97699956_97700007_97700310_97700432_97700563_97700698_97704346_97704549_97705474_97705649_97705845_97706043_97706233_97706415_97706540_97706652_97706847_97706940_97707281_97707408_97707804_97707921_97708733_97708846_97709143_97709235_97709318_97709510_97724615_97724673_97729239
ENSMUSG00000022476.9_0	chr15	-	2526	6	FSM	ENSMUSG00000022476.9	ENSMUST00000023113.7	2542	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAGTGCTGTCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	81810432	81799236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81800867_81801400_81801603_81802468_81802533_81802875_81802963_81806609_81806707_81809986
ENSMUSG00000022477.14_0	chr15	+	2898	18	FSM	ENSMUSG00000022477.14	ENSMUST00000023116.7	2918	18	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATTAATGTTCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	81756520	81799325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_17	chr15	+	2746	18	FSM	ENSMUSG00000022477.14	ENST00000678788.1	2753	18	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTACTATTACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	81756685	81799353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790067_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_24	chr15	+	2768	18	FSM	ENSMUSG00000022477.14	ENST00000396512.3	2778	18	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	81756696	81799302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81756750_81773498_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788277_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_36	chr15	+	2762	18	FSM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTACTATTACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	81756703	81799353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81756750_81756912_81757069_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_50	chr15	+	2707	17	ISM	ENSMUSG00000022477.14	ENST00000677532.1	2768	18	218	6	218	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTACTATTACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	81756921	81799353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_81757069_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788208_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022477.14_61	chr15	+	2714	17	ISM	ENSMUSG00000022477.14	ENST00000396512.3	2778	18	16803	10	16796	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAAAAAAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	81773499	81799302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_81773636_81779370_81779630_81783329_81783423_81787676_81787836_81788056_81788277_81788963_81789069_81790052_81790145_81791626_81791733_81793690_81793849_81794042_81794117_81794613_81794726_81796086_81796210_81796406_81796563_81797306_81797499_81797880_81798014_81798438_81798561_81798828
ENSMUSG00000022479.16_0	chr15	-	4354	10	FSM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACCAACTTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	97806186	97752316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604_97774736_97782674_97782823_97786293_97786370_97806115
ENSMUSG00000022479.16_1	chr15	-	4281	9	ISM	ENSMUSG00000022479.16	ENSMUST00000023119.15	4370	10	19824	11	19824	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACCAACTTGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	97786367	97752316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_97755513_97756669_97756787_97756978_97757131_97764997_97765170_97767198_97767305_97767526_97767712_97774604_97774736_97782674_97782823_97786293
ENSMUSG00000022483.18_0	chr15	-	4414	52	FSM	ENSMUSG00000022483.18	ENST00000337299.7	4428	52	12	2	-5	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCCCCGAACCCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	97902543	97873922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97874068_97874522_97874766_97875062_97875251_97875601_97875891_97876218_97876327_97876758_97876813_97877045_97877154_97877265_97877320_97877512_97877621_97877755_97877810_97878026_97878135_97878328_97878437_97878605_97878768_97879395_97879450_97879884_97879939_97880409_97880518_97880796_97880851_97881118_97881173_97881532_97881587_97881841_97881896_97882242_97882351_97882600_97882700_97882884_97882930_97883162_97883217_97883443_97883498_97883743_97883798_97884188_97884243_97884622_97884722_97885173_97885228_97885365_97885465_97885548_97885603_97885964_97886073_97886443_97886498_97886642_97886742_97886828_97886874_97887166_97887266_97888793_97888848_97889224_97889270_97891897_97891952_97892424_97892470_97892748_97892803_97892896_97892951_97893240_97893295_97893983_97894038_97894369_97894424_97894528_97894574_97895192_97895271_97896179_97896285_97896425_97896480_97896579_97896613_97896734_97896768_97902285
ENSMUSG00000022484.8_0	chr15	+	1887	2	FSM	ENSMUSG00000022484.8	ENSMUST00000001699.8	1909	2	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTCAAATGGATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	102875247	102880323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102876044_102879232
ENSMUSG00000022488.10_0	chr15	+	4724	31	FSM	ENSMUSG00000022488.10	ENSMUST00000047405.9	4725	31	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCGTGGATGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	103362253	103407236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103362409_103363397_103363509_103364266_103364360_103368611_103368669_103369965_103370109_103370928_103371020_103371106_103371245_103372792_103372842_103372932_103373090_103379655_103379713_103379953_103380051_103381194_103381305_103381465_103381599_103381943_103382026_103382226_103382286_103382479_103382626_103384028_103384162_103384404_103384525_103386704_103386851_103387150_103387283_103390386_103390606_103391941_103392073_103394758_103394857_103394972_103395067_103395219_103395303_103395535_103395617_103398418_103398513_103399337_103399455_103399892_103400003_103401647_103401738_103405838
ENSMUSG00000022498.17_0	chr16	-	3078	12	FSM	ENSMUSG00000022498.17	ENSMUST00000038424.14	3095	12	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATGAACTCGAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	10952507	10892784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10893507_10897567_10897649_10902071_10902182_10902614_10902758_10905640_10906434_10909449_10909651_10911679_10911793_10922429_10922524_10934658_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUSG00000022498.17_1	chr16	-	3473	4	FSM	ENSMUSG00000022498.17	ENSMUST00000118679.2	3523	4	20	30	18	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGTAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10952457	10931956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10934789_10940533_10940632_10946350_10946568_10952131
ENSMUSG00000022500.16_0	chr16	-	2225	4	FSM	ENSMUSG00000022500.16	ENSMUST00000023143.14	2235	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGAAGCTGTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	10810982	10777145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10778916_10781120_10781278_10784288_10784514_10810909
ENSMUSG00000022500.16_1	chr16	-	2150	3	ISM	ENSMUSG00000022500.16	ENSMUST00000117360.8	763	4	8932	-1542	8932	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGAAGCTGTCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	10784511	10777145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_10778916_10781120_10781278_10784288
ENSMUSG00000022503.11_1	chr16	+	2111	11	FSM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAACAAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	10229811	10242282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_10229860_10229933_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000022503.11_12	chr16	+	2051	10	ISM	ENSMUSG00000022503.11	ENSMUST00000023146.5	2121	11	133	11	133	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAACAAAAACAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10229944	10242281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_10230039_10231474_10231609_10235524_10235594_10237516_10237550_10238119_10238211_10238837_10238993_10239090_10239202_10239440_10239544_10240685_10240770_10241104
ENSMUSG00000022505.10_0	chr16	-	3420	5	FSM	ENSMUSG00000022505.10	ENSMUST00000078357.5	3440	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTGGATAATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	10131822	10099622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10102480_10103318_10103466_10105918_10106025_10110125_10110289_10131675
ENSMUSG00000022507.7_0	chr16	+	4051	4	FSM	ENSMUSG00000022507.7	ENSMUST00000023150.7	4072	4	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGCCAAAAAGACAACA	NA	NA	NA	NA	NA	NA	NA	NA	8647970	8676772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_8648550_8649184_8649266_8660831_8661108_8673657
ENSMUSG00000022510.15_11	chr16	+	1450	10	ISM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	60222	11	60222	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAATGAGCGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	25681031	25708043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25701276_25701435_25703560_25703706_25704955_25705050_25707757
ENSMUSG00000022510.15_3	chr16	+	2633	11	FSM	ENSMUSG00000022510.15	ENST00000418709.6	2640	11	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTAGTTTTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25503019	25696640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_25503102_25582015_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_7	chr16	+	2552	10	ISM	ENSMUSG00000022510.15	ENST00000418709.6	2640	11	79001	1	-38651	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTAGTTTTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25582014	25696640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_25582145_25582913_25583047_25639137_25639393_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25695376
ENSMUSG00000022510.15_8	chr16	+	1495	11	FSM	ENSMUSG00000022510.15	ENST00000449992.5	1506	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAATGAGCGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	25620809	25708043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_25620852_25681028_25681216_25682424_25682541_25683996_25684107_25684824_25684962_25686916_25687000_25689746_25689884_25701276_25701435_25703560_25703706_25704955_25705050_25707757
ENSMUSG00000022514.15_1	chr16	+	1662	9	ISM	ENSMUSG00000022514.15	ENST00000439062.6	1688	10	94987	13	94957	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAACAAGGCGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	26495463	26533836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_26495745_26498852_26499040_26511494_26511661_26513971_26514044_26517576_26517704_26519837_26519987_26529230_26529381_26530866_26531011_26533450
ENSMUSG00000022515.7_0	chr16	-	2383	17	FSM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTAGATGCAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4782037	4759314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ENSMUSG00000022515.7_1	chr16	-	2330	16	ISM	ENSMUSG00000022515.7	ENSMUST00000023157.6	2398	17	3608	11	3608	-11	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGATGCAAGTTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	4778429	4759310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4759662_4759762_4759852_4760074_4760159_4760556_4760643_4760942_4761116_4761422_4761565_4763918_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260
ENSMUSG00000022515.7_5	chr16	-	1759	11	FSM	ENSMUSG00000022515.7	ENSMUST00000229765.2	1779	11	5	15	5	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGAAATCCAAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	4782063	4763647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4764044_4765128_4765297_4765512_4765623_4766089_4766228_4768476_4768633_4771682_4771819_4773721_4773804_4775504_4775627_4775831_4776031_4778260_4778433_4781983
ENSMUSG00000022516.11_0	chr16	+	1604	3	FSM	ENSMUSG00000022516.11	ENSMUST00000230931.2	1618	3	9	5	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCATGTTGCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	4756633	4758878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4757158_4757241_4757503_4758059
ENSMUSG00000022516.11_2	chr16	+	1327	3	FSM	ENSMUSG00000022516.11	ENSMUST00000050881.10	1329	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCATGTTGCTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	4756985	4758878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4757158_4757241_4757578_4758059
ENSMUSG00000022517.18_0	chr16	+	3076	16	FSM	ENSMUSG00000022517.18	ENSMUST00000023159.10	3095	16	13	6	-6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATATTCTATGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4704125	4756153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022517.18_2	chr16	+	3118	17	FSM	ENSMUSG00000022517.18	ENSMUST00000070658.16	3138	17	9	11	-7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGCAATATTCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	4704124	4756149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4752058_4752104_4754759
ENSMUSG00000022517.18_4	chr16	+	2218	17	FSM	ENSMUSG00000022517.18	ENST00000262370.12	2230	17	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTCATGTGTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	4704156	4755260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4704338_4725231_4725351_4728583_4728673_4729185_4729333_4731553_4731672_4733616_4733684_4733968_4734019_4736729_4736778_4738176_4738246_4740457_4740618_4742286_4742397_4744172_4744239_4745538_4745766_4748554_4748679_4748976_4749020_4750063_4750163_4754759
ENSMUSG00000022519.15_0	chr16	-	3617	5	ISM	ENSMUSG00000022519.15	ENSMUST00000090500.10	3698	6	29196	0	29196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4311743	4298079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642
ENSMUSG00000022519.15_1	chr16	-	3696	6	FSM	ENSMUSG00000022519.15	ENSMUST00000090500.10	3698	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACGCCTTGGCCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4340937	4298079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311742_4340856
ENSMUSG00000022519.15_6	chr16	-	4979	7	FSM	ENSMUSG00000022519.15	ENSMUST00000023161.8	5000	7	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTCCAATCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4340926	4298099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4301149_4304140_4304375_4305356_4305474_4310157_4310254_4311642_4311745_4314268_4315580_4340856
ENSMUSG00000022521.11_0	chr16	-	10804	31	FSM	ENSMUSG00000022521.11	ENSMUST00000023165.9	10820	31	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAAGATGGTTCCGATT	NA	NA	NA	NA	NA	NA	NA	NA	4031852	3899198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3955229_3955344_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ENSMUSG00000022521.11_13	chr16	-	7741	30	FSM	ENSMUSG00000022521.11	ENSMUST00000205765.2	7749	30	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATCTGGTGTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4031269	3901564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3904063_3905544_3905827_3906107_3906270_3909655_3909824_3910053_3910220_3911335_3911450_3912037_3912185_3912499_3912651_3913926_3913995_3914304_3914383_3917538_3917596_3919421_3919503_3925291_3925381_3925899_3926140_3926963_3927083_3932637_3932828_3933641_3933822_3935118_3935533_3936896_3937086_3937595_3937721_3942033_3942079_3942499_3942672_3943508_3943627_3944330_3944478_3944733_3944837_3946307_3946551_3956608_3956850_3972720_3972898_3997287_3997998_4031002
ENSMUSG00000022526.9_0	chr15	-	4020	4	FSM	ENSMUSG00000022526.9	ENSMUST00000080406.7	4036	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAATATCAGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76755627	76735816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76738815_76754006_76754121_76754481_76754615_76754852
ENSMUSG00000022528.9_0	chr16	+	1459	4	FSM	ENSMUSG00000022528.9	ENSMUST00000023171.8	1468	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTAGAACTGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	29884165	29886613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29884517_29884648_29884745_29884980_29885069_29885689
ENSMUSG00000022533.15_0	chr16	-	6669	31	NIC	ENSMUSG00000022533.15	novel	6683	31	NA	NA	3	-11	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATTAAATATGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	30185721	30131251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr16_-_30133544_30133828_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393_30181568_30185652
ENSMUSG00000022533.15_1	chr16	-	6596	30	NIC	ENSMUSG00000022533.15	novel	6683	31	NA	NA	4161	-11	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATTAAATATGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	30181563	30131251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr16_-_30133544_30133828_30134720_30140623_30140714_30141689_30141771_30147773_30147863_30151016_30151205_30152576_30152746_30155007_30155081_30156319_30156417_30157249_30157360_30157444_30157488_30158430_30158511_30158593_30158717_30159040_30159217_30159970_30160096_30162251_30162373_30162460_30162615_30163324_30163457_30166443_30166595_30166867_30166930_30168502_30168692_30169780_30169939_30170046_30170227_30171085_30171218_30173049_30173123_30174570_30174706_30176022_30176093_30180237_30180309_30180631_30180803_30181393
ENSMUSG00000022536.15_0	chr16	-	3279	16	FSM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4867726	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUSG00000022536.15_1	chr16	-	3292	16	FSM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4867721	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613_4866651_4867669
ENSMUSG00000022536.15_2	chr16	-	3205	14	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	2042	0	2042	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4865679	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ENSMUSG00000022536.15_3	chr16	-	3240	15	ISM	ENSMUSG00000022536.15	ENSMUST00000115844.3	3292	16	1071	0	1071	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4866650	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839313_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ENSMUSG00000022536.15_6	chr16	-	3220	15	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	1079	0	1073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4866648	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597_4865678_4866613
ENSMUSG00000022536.15_7	chr16	-	3187	14	ISM	ENSMUSG00000022536.15	ENSMUST00000023189.15	3280	16	2048	0	2042	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAACTGTATCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4865679	4831772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4833467_4836263_4836389_4836703_4836884_4837150_4837314_4838130_4838233_4839201_4839295_4844371_4844472_4847197_4847272_4847366_4847418_4848048_4848106_4849750_4849838_4854099_4854340_4854782_4854922_4865597
ENSMUSG00000022537.19_0	chr16	-	2391	10	FSM	ENSMUSG00000022537.19	ENSMUST00000140402.8	2405	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTCTGGGCTCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	30369388	30332514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358206_30358357_30359556_30359728_30362219_30362307_30362494_30362659_30363943_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_1	chr16	-	1220	11	FSM	ENSMUSG00000022537.19	ENST00000473092.5	1240	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTTGAAAGGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30369314	30333622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30333641_30337117_30337148_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359728_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_2	chr16	-	1278	10	FSM	ENSMUSG00000022537.19	ENST00000392432.6	1300	10	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTTGAAAGGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30369312	30333622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30333641_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359818_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_28	chr16	-	1205	10	ISM	ENSMUSG00000022537.19	ENST00000473092.5	1240	11	8	3504	8	-3504	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGACAAGCGTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	30369317	30337117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_30337148_30348229_30348389_30356271_30356377_30358224_30358357_30359556_30359728_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_3	chr16	-	1183	10	FSM	ENSMUSG00000022537.19	ENST00000381975.7	1206	10	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTTGAAAGGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30369311	30333622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30333641_30348229_30348385_30356271_30356377_30358224_30358357_30359556_30359728_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022537.19_34	chr16	-	1264	9	ISM	ENSMUSG00000022537.19	ENST00000392432.6	1300	10	9	14616	9	-14616	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGGGGCTGCCCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	30369316	30348229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_30348389_30356271_30356377_30358224_30358357_30359556_30359818_30362219_30362307_30362494_30362654_30363939_30364038_30366160_30366288_30369180
ENSMUSG00000022538.21_0	chr16	-	3163	14	FSM	ENSMUSG00000022538.21	ENSMUST00000117363.9	3180	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATGAATTCACAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	30406400	30379318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30380681_30383463_30383638_30384247_30384328_30386528_30386653_30387922_30388067_30388146_30388249_30389982_30390355_30392010_30392188_30393363_30393425_30399776_30399864_30400873_30400961_30401348_30401470_30404371_30404499_30406255
ENSMUSG00000022540.17_0	chr16	-	1348	11	FSM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4831380	4826599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000022540.17_1	chr16	-	1286	10	ISM	ENSMUSG00000022540.17	ENSMUST00000202281.4	1355	11	151	6	151	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4831230	4826599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829557_4830104_4830160_4830290_4830374_4831166
ENSMUSG00000022540.17_3	chr16	-	1425	11	FSM	ENSMUSG00000022540.17	ENSMUST00000023191.17	1431	11	0	6	0	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGGCCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4831391	4826599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4827117_4827341_4827469_4827764_4827815_4827903_4828018_4828330_4828430_4828710_4828807_4829475_4829623_4830104_4830160_4830290_4830374_4831166_4831239_4831326
ENSMUSG00000022542.8_0	chr16	-	1051	8	FSM	ENSMUSG00000022542.8	ENST00000396693.9	1070	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTAAAGGGTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	4814469	4805204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4805523_4805610_4805663_4806342_4806440_4809590_4809687_4809774_4809893_4811598_4811681_4811757_4811884_4814307
ENSMUSG00000022544.15_0	chr16	-	2152	8	FSM	ENSMUSG00000022544.15	ENSMUST00000064635.12	2170	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGATTATGTGCGCAT	NA	NA	NA	NA	NA	NA	NA	NA	5073837	5062023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5063250_5065316_5065464_5066428_5066695_5066775_5066910_5067210_5067313_5068338_5068420_5070888_5070952_5073704
ENSMUSG00000022544.15_6	chr16	-	547	4	FSM	ENSMUSG00000022544.15	ENST00000587133.1	559	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAATGCCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5073793	5066433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5066695_5066775_5066910_5070888_5070952_5073704
ENSMUSG00000022544.15_7	chr16	-	690	6	FSM	ENSMUSG00000022544.15	ENST00000513466.5	708	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAATGCCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5073787	5066433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5066695_5066775_5066878_5067210_5067313_5068338_5068420_5070888_5070950_5073704
ENSMUSG00000022544.15_8	chr16	-	461	3	ISM	ENSMUSG00000022544.15	ENST00000587133.1	559	4	2846	5	2846	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAATGCCCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	5070954	5066433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_5066695_5066775_5066910_5070888
ENSMUSG00000022545.14_0	chr16	+	3468	11	FSM	ENSMUSG00000022545.14	ENSMUST00000023206.14	3480	11	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTCTTGGTTTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	12927555	12966594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_12928006_12929594_12929776_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ENSMUSG00000022545.14_10	chr16	+	2867	12	FSM	ENSMUSG00000022545.14	ENST00000682617.1	2889	12	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTGACTGTTCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	12927782	12966114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_12928006_12929594_12929776_12931590_12931697_12939859_12940056_12941197_12941406_12943114_12943296_12944258_12944388_12945418_12945530_12947997_12948599_12950721_12950815_12962264_12962378_12965389
ENSMUSG00000022546.6_0	chr15	+	1779	11	FSM	ENSMUSG00000022546.6	ENSMUST00000023203.6	1792	11	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACCTGACTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76580940	76583881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76581220_76581358_76581449_76581521_76581631_76581741_76581876_76582039_76582284_76582502_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ENSMUSG00000022546.6_2	chr15	+	963	6	FSM	ENSMUSG00000022546.6	ENSMUST00000229140.2	982	6	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGAGGTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	76582425	76583844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76582583_76582655_76582793_76582914_76583090_76583195_76583352_76583435_76583549_76583619
ENSMUSG00000022548.15_0	chr16	-	2055	6	FSM	ENSMUSG00000022548.15	ENSMUST00000130560.8	2074	6	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	31133626	31115028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31116395_31119212_31119302_31122227_31122350_31129831_31129983_31133216_31133287_31133369
ENSMUSG00000022550.19_0	chr15	+	2020	15	FSM	ENSMUSG00000022550.19	ENSMUST00000162503.8	2040	15	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAAATCGTTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	76460570	76480009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76460695_76471957_76472062_76473268_76473419_76477433_76477510_76477630_76477832_76477918_76478060_76478137_76478252_76478352_76478485_76478563_76478648_76478728_76478811_76478873_76478953_76479046_76479139_76479213_76479467_76479536_76479654_76479738
ENSMUSG00000022551.9_0	chr15	+	1503	7	FSM	ENSMUSG00000022551.9	ENSMUST00000023210.8	1520	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAAGCACCCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76227732	76230453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76227893_76228501_76228699_76228781_76228909_76229011_76229170_76229252_76229414_76229676_76229778_76229854
ENSMUSG00000022552.17_0	chr15	-	1718	9	FSM	ENSMUSG00000022552.17	ENSMUST00000023211.16	1734	9	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCCAGCCTGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	76235303	76231247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76231386_76231458_76231588_76231681_76231795_76231863_76232018_76232095_76232205_76232285_76232428_76232500_76232636_76234254_76234430_76234680
ENSMUSG00000022553.17_0	chr15	+	1730	9	FSM	ENSMUSG00000022553.17	ENSMUST00000161527.8	1743	9	9	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATGGAACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76235502	76238568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76235860_76236195_76236242_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUSG00000022553.17_1	chr15	+	1634	8	FSM	ENSMUSG00000022553.17	ENSMUST00000160853.8	1651	8	12	5	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATGGAACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76235505	76238568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76235860_76236666_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUSG00000022553.17_19	chr15	+	1705	7	FSM	ENSMUSG00000022553.17	ENST00000534585.5	1724	7	14	5	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATGGAACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76235558	76238568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76235860_76236623_76236753_76236845_76236975_76237046_76237213_76237337_76237661_76237785_76237921_76238046
ENSMUSG00000022553.17_9	chr15	+	1670	8	FSM	ENSMUSG00000022553.17	ENSMUST00000023212.15	1686	8	11	5	-10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGATGGAACCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	76235516	76238568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76235860_76236619_76236753_76236845_76236975_76237046_76237213_76237337_76237460_76237540_76237661_76237785_76237921_76238046
ENSMUSG00000022554.8_0	chr15	+	1952	6	FSM	ENSMUSG00000022554.8	ENSMUST00000023213.8	1993	6	7	34	7	-34	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76253104	76255603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76253770_76253851_76253953_76254055_76254155_76254361_76254454_76254531_76254655_76254731
ENSMUSG00000022555.13_0	chr15	-	1872	17	FSM	ENSMUSG00000022555.13	ENSMUST00000023214.11	1888	17	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTCTTGCAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	76396143	76386222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76386589_76386691_76386755_76386843_76386932_76387018_76387085_76387158_76387272_76387353_76387399_76387473_76387516_76387589_76387629_76387717_76387822_76387905_76387981_76388064_76388173_76388314_76388421_76388548_76388602_76388685_76388772_76388865_76388907_76390765_76390854_76395754
ENSMUSG00000022556.12_0	chr15	+	1995	12	FSM	ENSMUSG00000022556.12	ENSMUST00000072838.6	2018	12	12	11	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACATACATACATACAT	NA	NA	NA	NA	NA	NA	NA	NA	76361656	76385161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384466_76384537_76384616
ENSMUSG00000022556.12_1	chr15	+	2061	13	FSM	ENSMUSG00000022556.12	ENSMUST00000227478.2	2084	13	12	11	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACATACATACATACAT	NA	NA	NA	NA	NA	NA	NA	NA	76361656	76385161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76361918_76380169_76380279_76380652_76380790_76381035_76381161_76381818_76381895_76381967_76382030_76382151_76382249_76382353_76382491_76382621_76382892_76384147_76384254_76384330_76384397_76384466_76384537_76384616
ENSMUSG00000022557.12_0	chr15	-	2482	16	FSM	ENSMUSG00000022557.12	ENSMUST00000023217.11	2491	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGCTGGCAGCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	76361468	76337188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76337579_76337662_76337771_76337843_76337929_76338016_76338306_76338377_76338559_76338651_76338785_76338873_76338944_76339017_76339099_76339169_76339332_76339407_76339621_76339695_76339798_76339881_76340000_76340071_76340227_76350971_76351053_76358947_76359122_76361328
ENSMUSG00000022558.17_0	chr15	+	5260	44	FSM	ENSMUSG00000022558.17	ENSMUST00000096385.11	5268	44	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTCAGTGGGTGACATT	NA	NA	NA	NA	NA	NA	NA	NA	76264712	76337230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76264777_76274230_76274328_76276580_76276660_76278002_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311417_76311711_76311857_76312101_76312143_76312443_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_5	chr15	+	4847	39	FSM	ENSMUSG00000022558.17	ENST00000534366.5	4861	39	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGACTTCACTCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	76278012	76337110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311415_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022558.17_6	chr15	+	4874	40	FSM	ENSMUSG00000022558.17	ENST00000528919.5	4888	40	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGACTTCACTCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	76278012	76337110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76278149_76285775_76285908_76286332_76286496_76286682_76286782_76292091_76292244_76292587_76292729_76293082_76293176_76297101_76297181_76298418_76298533_76305339_76305414_76307915_76308036_76311308_76311415_76311711_76311857_76312416_76312586_76312848_76312902_76313352_76313461_76313987_76314108_76314376_76314500_76316348_76316496_76316571_76316599_76317473_76317597_76317737_76317818_76318026_76318142_76318262_76318359_76318882_76318988_76319969_76320106_76320204_76320318_76321437_76321591_76327449_76327605_76330715_76330882_76331368_76331566_76334285_76334424_76334838_76334954_76335261_76335409_76335546_76335736_76336004_76336161_76336243_76336379_76336446_76336550_76336627_76336694_76337025
ENSMUSG00000022559.9_0	chr15	-	1693	9	FSM	ENSMUSG00000022559.9	ENSMUST00000023219.9	1710	9	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGATTTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	76422927	76419929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76420164_76420424_76420672_76420772_76421005_76421092_76421207_76421289_76421398_76421488_76421621_76421922_76421987_76422116_76422276_76422524
ENSMUSG00000022560.10_0	chr15	+	1636	5	FSM	ENSMUSG00000022560.10	ENST00000532815.2	1653	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGGACCAGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	76421899	76425300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76422124_76423587_76423803_76423893_76424780_76424871_76424996_76425113
ENSMUSG00000022560.10_1	chr15	+	5279	5	FSM	ENSMUSG00000022560.10	ENSMUST00000023220.10	5289	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATTGTCCTGTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	76423036	76428803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76423396_76423582_76423803_76423893_76424780_76424871_76424996_76425113
ENSMUSG00000022560.10_4	chr15	+	878	4	FSM	ENSMUSG00000022560.10	ENST00000526338.7	894	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGGACCAGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	76423614	76425300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76423803_76424400_76424780_76424871_76424996_76425113
ENSMUSG00000022561.14_0	chr15	+	2095	12	FSM	ENSMUSG00000022561.14	ENSMUST00000023221.13	2107	12	12	0	12	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGGCCCGCTGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	76215442	76219107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76215664_76216095_76216276_76216359_76216472_76216683_76216832_76216909_76217012_76217102_76217300_76217376_76217574_76217663_76217818_76217994_76218091_76218213_76218405_76218489_76218661_76218781
ENSMUSG00000022562.16_0	chr15	-	3935	26	ISM	ENSMUSG00000022562.16	ENSMUST00000171340.9	4081	27	413	9	413	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCATGGTTATTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	76190888	76180809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674
ENSMUSG00000022562.16_1	chr15	-	3963	27	FSM	ENSMUSG00000022562.16	ENSMUST00000023222.13	3970	27	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGCATGGTTATTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	76191445	76180809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76180982_76181120_76181219_76181316_76181478_76181558_76181717_76181818_76181969_76182105_76182241_76182335_76182483_76182586_76182772_76185025_76185201_76185292_76185395_76185486_76185648_76186245_76186398_76186581_76186695_76186830_76186970_76187055_76187194_76187377_76187549_76187635_76187749_76188286_76188553_76188665_76188734_76188833_76188973_76189092_76189259_76189339_76189536_76189647_76189772_76189860_76189961_76190398_76190591_76190674_76190899_76191427
ENSMUSG00000022564.8_0	chr15	+	1764	7	FSM	ENSMUSG00000022564.8	ENST00000313269.5	1781	7	9	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGGAGGCTCTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	76130974	76134045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76131199_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022564.8_5	chr15	+	1715	7	FSM	ENSMUSG00000022564.8	ENSMUST00000023225.8	1725	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTGCTTCTCCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	76130984	76134104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76131101_76132050_76132378_76132458_76132569_76132648_76132850_76132971_76133101_76133177_76133322_76133416
ENSMUSG00000022565.16_0	chr15	-	15433	33	FSM	ENSMUSG00000022565.16	ENSMUST00000073418.13	15455	33	14	8	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76090507	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078758_76078774_76078950_76079013_76089797
ENSMUSG00000022565.16_13	chr15	-	14944	34	FSM	ENSMUSG00000022565.16	ENSMUST00000080857.12	14959	34	7	8	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76092446	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078165_76078202_76078540_76078631_76078758_76078774_76078950_76079013_76092261
ENSMUSG00000022565.16_2	chr15	-	14894	32	FSM	ENSMUSG00000022565.16	ENSMUST00000071869.12	14917	32	15	8	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76093350	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76093164
ENSMUSG00000022565.16_22	chr15	-	14829	32	FSM	ENSMUSG00000022565.16	ENSMUST00000074834.12	14855	32	19	7	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76113678	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76113557
ENSMUSG00000022565.16_29	chr15	-	14804	32	FSM	ENSMUSG00000022565.16	ENSMUST00000169438.8	14827	32	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76083589	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76083493
ENSMUSG00000022565.16_4	chr15	-	14949	34	FSM	ENSMUSG00000022565.16	ENSMUST00000089610.10	14972	34	15	8	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76115563	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078165_76078202_76078540_76078631_76078758_76078774_76078950_76079013_76115373
ENSMUSG00000022565.16_44	chr15	-	15424	32	FSM	ENSMUSG00000022565.16	ENSMUST00000076442.12	15439	32	9	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76090513	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76089797
ENSMUSG00000022565.16_45	chr15	-	14978	32	FSM	ENSMUSG00000022565.16	ENSMUST00000023226.13	15001	32	17	6	17	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76079893	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76079623
ENSMUSG00000022565.16_53	chr15	-	14917	32	FSM	ENSMUSG00000022565.16	ENSMUST00000072692.11	14944	32	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76082388	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76082179
ENSMUSG00000022565.16_58	chr15	-	14982	32	FSM	ENSMUSG00000022565.16	ENSMUST00000169714.8	15001	32	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76084022	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76083748
ENSMUSG00000022565.16_6	chr15	-	15004	33	FSM	ENSMUSG00000022565.16	ENSMUST00000054449.14	15018	33	6	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76084029	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078758_76078774_76078950_76079013_76083748
ENSMUSG00000022565.16_61	chr15	-	14837	32	FSM	ENSMUSG00000022565.16	ENSMUST00000169108.8	14853	32	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76084797	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76084668
ENSMUSG00000022565.16_67	chr15	-	14933	32	FSM	ENSMUSG00000022565.16	ENSMUST00000171562.8	14944	32	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCACCTGGGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76092848	76055181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76062586_76062718_76066100_76067109_76067209_76067290_76067396_76067561_76067646_76067722_76068080_76068166_76068306_76069510_76069690_76069808_76069967_76070053_76070238_76070340_76070468_76070559_76070715_76070810_76070964_76071836_76071963_76072178_76072275_76072372_76072478_76072663_76072826_76072907_76072986_76073070_76073381_76073456_76073612_76074301_76074396_76074658_76074787_76075048_76075145_76075216_76075337_76075441_76075549_76075619_76075736_76076380_76076548_76077420_76077514_76077609_76077688_76078540_76078631_76078950_76079013_76092623
ENSMUSG00000022568.18_0	chr15	-	5418	36	FSM	ENSMUSG00000022568.18	ENSMUST00000063747.12	5440	36	16	6	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	75941587	75919012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75919387_75919469_75919522_75919963_75920002_75920070_75920214_75920290_75920477_75920558_75920707_75920782_75920943_75921051_75921151_75921898_75921962_75923250_75923326_75923469_75923527_75923602_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ENSMUSG00000022568.18_14	chr15	-	5128	35	FSM	ENSMUSG00000022568.18	ENST00000674084.1	5146	35	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTCTTGTCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	75941229	75919012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75919387_75919469_75919560_75920070_75920214_75920290_75920471_75920558_75920707_75920782_75920943_75921051_75921151_75921305_75921390_75921898_75921962_75923250_75923326_75923555_75923714_75929235_75929425_75929493_75929788_75929874_75929986_75930810_75931069_75931146_75931228_75931331_75931656_75932415_75932494_75932982_75933073_75933587_75933651_75934518_75934897_75935439_75935605_75936324_75936451_75936545_75936677_75936758_75936926_75936998_75937199_75937938_75938058_75938458_75938604_75938668_75938744_75938842_75938907_75938993_75939051_75939138_75939229_75939325_75939405_75939509_75939628_75941077
ENSMUSG00000022570.8_0	chr15	-	1344	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229641.2	1355	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAAGCTGGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75801671	75796525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801567
ENSMUSG00000022570.8_1	chr15	-	1404	11	FSM	ENSMUSG00000022570.8	ENSMUST00000229951.2	1405	11	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGAAGCTGGGCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	75801575	75796525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798138_75798307_75798591_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUSG00000022570.8_12	chr15	-	1322	11	FSM	ENSMUSG00000022570.8	ENSMUST00000023231.7	1335	11	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCCTGGACTCAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	75801593	75796535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798945_75800277_75800393_75800740_75800899_75801501
ENSMUSG00000022570.8_6	chr15	-	1208	10	FSM	ENSMUSG00000022570.8	ENSMUST00000229289.2	1223	10	7	8	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGACTCAGAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	75801629	75796532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75796844_75797133_75797234_75797431_75797512_75797641_75797709_75797977_75798043_75798172_75798307_75798647_75798722_75798815_75798973_75800740_75800899_75801567
ENSMUSG00000022571.10_0	chr15	-	1332	6	FSM	ENSMUSG00000022571.10	ENSMUST00000053918.9	1339	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTGGACTTTAGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75793402	75788325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75788929_75789085_75789179_75790100_75790314_75790521_75790702_75791077_75791143_75793224
ENSMUSG00000022574.8_0	chr15	-	1755	11	FSM	ENSMUSG00000022574.8	ENST00000435154.7	1771	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCGAGGTCCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	75766072	75762867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUSG00000022574.8_7	chr15	-	1487	12	FSM	ENSMUSG00000022574.8	ENST00000426292.7	1498	12	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTATCCGGTAGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	75766073	75763007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75763106_75763234_75763351_75763428_75763532_75763632_75763714_75763811_75763897_75764190_75764332_75764405_75764603_75764953_75765070_75765154_75765286_75765401_75765485_75765568_75765697_75765865
ENSMUSG00000022575.6_0	chr15	+	1763	11	FSM	ENSMUSG00000022575.6	ENSMUST00000023238.6	1792	11	15	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAAAGCATAATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75734190	75739243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75734331_75735253_75735478_75736092_75736286_75736797_75736967_75737271_75737375_75737608_75737660_75737935_75738026_75738144_75738321_75738394_75738540_75738638_75738713_75738845
ENSMUSG00000022577.18_0	chr15	-	787	4	FSM	ENSMUSG00000022577.18	ENST00000430474.6	797	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGAGGGCAAGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	75438429	75436720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75437191_75437431_75437549_75437980_75438109_75438357
ENSMUSG00000022577.18_1	chr15	-	716	3	ISM	ENSMUSG00000022577.18	ENST00000430474.6	797	4	323	7	323	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGGAGGGCAAGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	75438109	75436720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75437191_75437431_75437549_75437980
ENSMUSG00000022580.14_0	chr15	+	3353	15	FSM	ENSMUSG00000022580.14	ENSMUST00000121137.9	3360	15	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGCCATTACATGATA	NA	NA	NA	NA	NA	NA	NA	NA	75576130	75587329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75576324_75580019_75580136_75580837_75580967_75581085_75581162_75581862_75581941_75582303_75582429_75582514_75582682_75582836_75583031_75583402_75583560_75583639_75583748_75584105_75584301_75584850_75584928_75585067_75585215_75585298_75585461_75585900
ENSMUSG00000022583.13_0	chr15	+	807	3	FSM	ENSMUSG00000022583.13	ENSMUST00000189654.2	818	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAGATCTCAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75140561	75144084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75140649_75141628_75141746_75143481
ENSMUSG00000022584.15_0	chr15	-	821	4	FSM	ENSMUSG00000022584.15	ENSMUST00000100542.10	822	4	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAATCTCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74983819	74980010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74980601_74982359_74982477_74983446_74983530_74983788
ENSMUSG00000022584.15_1	chr15	-	774	3	FSM	ENSMUSG00000022584.15	ENSMUST00000188214.7	638	3	33	-169	33	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAATCTCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74983513	74980010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74980601_74982359_74982477_74983446
ENSMUSG00000022587.15_0	chr15	+	2053	5	FSM	ENSMUSG00000022587.15	ENSMUST00000188866.7	2068	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACACCTGGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	74826908	74831746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_74827185_74827415_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_1	chr15	+	2135	5	FSM	ENSMUSG00000022587.15	ENSMUST00000169343.8	2154	5	11	8	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACACCTGGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	74826910	74831746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_74827185_74827331_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_5	chr15	+	2264	4	FSM	ENSMUSG00000022587.15	ENSMUST00000051698.14	2281	4	9	8	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACACCTGGCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	74826928	74831746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_74827567_74829625_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_6	chr15	+	1114	4	FSM	ENSMUSG00000022587.15	ENSMUST00000191436.7	1122	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCCTGCTATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74827503	74831174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_74827567_74829628_74829727_74830117_74830238_74830341
ENSMUSG00000022587.15_9	chr15	+	1047	3	ISM	ENSMUSG00000022587.15	ENSMUST00000188042.2	714	4	1229	-499	1229	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTCCTGCTATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74829632	74831174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_74829727_74830117_74830238_74830341
ENSMUSG00000022589.9_0	chr15	-	1390	8	FSM	ENSMUSG00000022589.9	ENST00000517471.5	1402	8	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAATTTTTGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	74728074	74722811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74723002_74723543_74723623_74723854_74724022_74724887_74725043_74725312_74725517_74725644_74725845_74727278_74727435_74727835
ENSMUSG00000022591.6_0	chr1	+	2814	1	FSM	ENSMUSG00000022591.6	ENSMUST00000023262.6	2822	1	8	0	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTTGCAGCCCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	82210840	82213654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82210800_82213700
ENSMUSG00000022594.15_0	chr15	-	4006	4	FSM	ENSMUSG00000022594.15	ENSMUST00000023259.15	4023	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTGGCTCTCTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	74624885	74619707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74623277_74623391_74623494_74623703_74623887_74624733
ENSMUSG00000022601.12_0	chr16	+	4900	11	FSM	ENSMUSG00000022601.12	ENSMUST00000050248.9	4920	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAAGCTTTGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	55794256	55829267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55794735_55800957_55801194_55802537_55802770_55810621_55811458_55811804_55811982_55818368_55818615_55820941_55821087_55823071_55823190_55826272_55826432_55826537_55826714_55827170
ENSMUSG00000022602.15_0	chr15	-	3044	3	FSM	ENSMUSG00000022602.15	ENSMUST00000110009.4	3054	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACTTATTGGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	74544419	74540941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74541843_74542028_74542166_74542413
ENSMUSG00000022602.15_1	chr15	-	3031	3	FSM	ENSMUSG00000022602.15	ENSMUST00000023268.14	3055	3	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACTTATTGGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	74544403	74540941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74541843_74542028_74542169_74542413
ENSMUSG00000022604.19_0	chr16	-	7892	11	FSM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	11	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATTTAGGTGTGATATC	NA	NA	NA	NA	NA	NA	NA	NA	55755207	55720258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828_55750972_55755115
ENSMUSG00000022604.19_1	chr16	-	7803	10	ISM	ENSMUSG00000022604.19	ENSMUST00000023270.14	7911	11	4252	0	3630	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGATATCTGGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	55750966	55720250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_55726233_55731917_55731994_55735219_55735995_55738900_55739026_55739765_55739931_55742433_55742601_55743289_55743404_55745331_55745434_55748083_55748243_55750828
ENSMUSG00000022607.19_0	chr15	-	4399	32	FSM	ENSMUSG00000022607.19	ENSMUST00000110036.11	4417	32	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73295025	73076953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUSG00000022607.19_23	chr15	-	4143	30	FSM	ENSMUSG00000022607.19	ENST00000340930.7	4164	30	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTGGCGCCGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	73215198	73076970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087823_73087935_73088160_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981
ENSMUSG00000022607.19_32	chr15	-	4196	31	FSM	ENSMUSG00000022607.19	ENST00000519419.5	4213	31	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTACAGCCACTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	73232172	73077189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73148705_73148763_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73231874
ENSMUSG00000022607.19_6	chr15	-	4520	35	FSM	ENSMUSG00000022607.19	ENSMUST00000239146.2	4540	35	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGCATTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73295023	73076953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73078110_73081176_73081258_73082590_73082747_73087827_73087935_73088192_73088233_73093655_73093719_73101709_73101842_73103703_73103842_73108000_73108088_73114214_73114327_73128882_73129088_73131396_73131487_73134362_73134464_73136062_73136179_73137950_73138052_73140657_73140743_73146335_73146434_73147469_73147491_73148705_73148763_73154066_73154085_73155115_73155200_73163883_73163937_73167201_73167233_73168439_73168558_73169986_73170095_73175668_73175747_73176255_73176397_73181663_73181719_73192623_73192687_73192889_73192970_73197597_73197686_73202697_73202865_73214981_73215209_73266496_73266594_73294857
ENSMUSG00000022610.11_0	chr15	-	1788	12	FSM	ENSMUSG00000022610.11	ENSMUST00000088827.8	1808	12	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTGGTTGTGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89024807	89014789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89015422_89016697_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019629_89019660_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_3	chr15	-	982	10	FSM	ENSMUSG00000022610.11	ENST00000622558.4	997	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGAGTGTGGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89024667	89016701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330_89024461_89024550
ENSMUSG00000022610.11_4	chr15	-	867	9	FSM	ENSMUSG00000022610.11	ENST00000395780.5	884	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTGAGTGTGGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89024462	89016701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89016872_89016955_89017035_89017103_89017184_89017281_89017354_89018814_89018930_89019325_89019374_89019779_89019892_89021603_89021663_89024330
ENSMUSG00000022613.9_0	chr15	+	824	9	FSM	ENSMUSG00000022613.9	ENST00000395732.7	830	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTCCAATACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89219178	89221050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89219256_89219480_89219562_89219690_89219854_89220042_89220111_89220217_89220328_89220430_89220499_89220596_89220647_89220732_89220832_89220942
ENSMUSG00000022613.9_6	chr15	+	747	8	ISM	ENSMUSG00000022613.9	ENST00000395732.7	830	9	307	1	307	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTCCAATACCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	89219480	89221050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_89219562_89219690_89219854_89220042_89220111_89220217_89220328_89220430_89220499_89220596_89220647_89220732_89220832_89220942
ENSMUSG00000022614.9_0	chr15	-	2894	14	FSM	ENSMUSG00000022614.9	ENSMUST00000023283.6	2906	14	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAAGCTGCGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89239853	89235209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238031_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022614.9_7	chr15	-	2215	14	FSM	ENSMUSG00000022614.9	ENST00000474879.7	2227	14	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTCCTGCCAGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	89239656	89235695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89236091_89236185_89236283_89236355_89236468_89236561_89236731_89236806_89236990_89237061_89237159_89237236_89237343_89237412_89237548_89237659_89237802_89238027_89238211_89238285_89238501_89238629_89238659_89238766_89239021_89239558
ENSMUSG00000022615.8_0	chr15	-	1131	3	FSM	ENSMUSG00000091780.4	ENSMUST00000167643.4	1145	3	8	6	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATCTGTGCATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	89258013	89255845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89256669_89257625_89257806_89257885
ENSMUSG00000022615.8_2	chr15	-	968	2	FSM	ENSMUSG00000091780.4	ENST00000543927.6	986	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTTGCCCTGAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	89258333	89255899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89256669_89258134
ENSMUSG00000022617.16_0	chr15	-	1685	11	FSM	ENSMUSG00000022617.16	ENSMUST00000023289.13	1707	11	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATAAACTTAAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89314092	89310581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89312748_89312916_89313031_89313251_89313361_89313579
ENSMUSG00000022620.15_0	chr15	-	3478	9	FSM	ENSMUSG00000022620.15	ENSMUST00000165199.8	3492	9	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTAATCTTTTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	89361621	89356685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89357761_89357871_89357975_89358209_89358338_89358430_89358556_89358742_89358913_89358989_89359209_89359324_89359566_89359710_89360859_89361352
ENSMUSG00000022621.17_0	chr15	-	1630	9	FSM	ENSMUSG00000022621.17	ENSMUST00000023294.15	1640	9	7	3	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTAAGGGTCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	89476119	89466738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89467634_89467801_89467886_89468112_89468211_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475_89474630_89476022
ENSMUSG00000022621.17_2	chr15	-	394	5	FSM	ENSMUSG00000022621.17	ENST00000376439.3	405	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGCCGGGCCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	89474579	89467803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89467886_89468112_89468211_89471116_89471197_89472390_89472421_89474475
ENSMUSG00000022621.17_3	chr15	-	580	7	FSM	ENSMUSG00000022621.17	ENST00000393166.7	594	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGCCGGGCCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	89474576	89467803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89467886_89468112_89468208_89468481_89468594_89470461_89470542_89471116_89471197_89472390_89472421_89474475
ENSMUSG00000022629.18_0	chr15	-	6125	33	FSM	ENSMUSG00000022629.18	ENSMUST00000109288.9	6142	33	14	3	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTAGTCTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	90934137	90817481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90833208_90833248_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022629.18_1	chr15	-	6429	37	FSM	ENSMUSG00000022629.18	ENSMUST00000100304.11	6439	37	7	3	7	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTAGTCTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	90934144	90817481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90833208_90833248_90835448_90835578_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90844054_90844076_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90860673_90860713_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022629.18_16	chr15	-	5980	33	FSM	ENSMUSG00000022629.18	ENSMUST00000109287.4	5988	33	1	7	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTTCTATTATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	90934020	90817491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90840497_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022629.18_18	chr15	-	6173	36	FSM	ENSMUSG00000022629.18	ENSMUST00000067205.16	6184	36	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATTGTTTCTATTATA	NA	NA	NA	NA	NA	NA	NA	NA	90934034	90817495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90832526_90832542_90833208_90833248_90835448_90835578_90840497_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022629.18_20	chr15	-	4855	33	FSM	ENSMUSG00000022629.18	ENST00000544797.6	4883	33	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACATGGCTGGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90882243	90818658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90835448_90835578_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035
ENSMUSG00000022629.18_5	chr15	-	6378	36	NIC	ENSMUSG00000022629.18	novel	6333	37	NA	NA	37	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTAGTCTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	90934114	90817481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90833208_90833248_90835448_90835578_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90860673_90860713_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022629.18_9	chr15	-	6325	37	FSM	ENSMUSG00000022629.18	ENSMUST00000088614.13	6333	37	8	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATACTAGTCTTTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	90934040	90817481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90818747_90819837_90820038_90821363_90821535_90823187_90823306_90824633_90824799_90826316_90826498_90827967_90828105_90833208_90833248_90835448_90835578_90836913_90837022_90840497_90840713_90843279_90843335_90843890_90843952_90849177_90849199_90849669_90849836_90850539_90850642_90851398_90851594_90852263_90852418_90852559_90852775_90852965_90853035_90853980_90854089_90854881_90855082_90855285_90855475_90855867_90855992_90856827_90856919_90860673_90860713_90864997_90865202_90868936_90869001_90869444_90869635_90869987_90870184_90875912_90876029_90877903_90878072_90878543_90878679_90879686_90879837_90881745_90881929_90882035_90882259_90933861
ENSMUSG00000022634.10_0	chr15	-	1608	3	ISM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	352	7	352	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACAGTTTTGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	93234337	93182165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_93183504_93184290_93184444_93234220
ENSMUSG00000022634.10_1	chr15	-	1669	4	FSM	ENSMUSG00000022634.10	ENSMUST00000080299.7	1676	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACAGTTTTGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	93234689	93182165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_93183504_93184290_93184444_93234220_93234347_93234637
ENSMUSG00000022635.10_0	chr15	-	837	8	FSM	ENSMUSG00000022635.10	ENSMUST00000162160.8	850	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGACTGGTTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	93296171	93283979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_93284165_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUSG00000022635.10_1	chr15	-	855	8	FSM	ENSMUSG00000022635.10	ENSMUST00000076070.9	877	8	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAATGCAGTTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	93296203	93283996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_93284168_93285457_93285534_93285627_93285741_93288931_93289040_93289334_93289447_93293467_93293497_93295050_93295137_93296043
ENSMUSG00000022636.14_0	chr16	-	6004	16	FSM	ENSMUSG00000022636.14	ENSMUST00000023312.14	6036	16	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATTGATGTGATTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	52274414	52069367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_52072010_52073487_52073600_52088744_52088863_52089152_52089192_52091009_52091143_52094272_52094407_52094509_52094646_52097150_52097264_52109280_52109414_52111239_52111368_52115386_52115570_52116025_52116114_52117282_52117348_52125921_52126142_52130174_52130276_52272755
ENSMUSG00000022637.12_0	chr16	+	6633	18	FSM	ENSMUSG00000022637.12	ENSMUST00000114471.3	6648	18	2	13	2	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAACAAATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51851589	52028398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_51852049_51853371_51853554_51867561_51867813_51932463_51932611_51951427_51951585_51956121_51956244_51959853_51959992_51961369_51961458_51963129_51963262_51972873_51973078_51984658_51984845_51986351_51986715_51994716_51994812_52003574_52003722_52006497_52006596_52009375_52009517_52014521_52014642_52024795
ENSMUSG00000022639.15_0	chr16	-	2039	4	FSM	ENSMUSG00000022639.15	ENSMUST00000186944.7	2052	4	8	5	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACCTGAGTGAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	50553128	50539661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50540910_50547236_50547362_50548254_50548573_50552780
ENSMUSG00000022639.15_3	chr16	-	2886	2	FSM	ENSMUSG00000022639.15	ENSMUST00000186535.2	2896	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTGAGTAGTACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	50553081	50545987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50548573_50552780
ENSMUSG00000022641.16_0	chr16	-	8727	17	FSM	ENSMUSG00000022641.16	ENSMUST00000138166.8	8743	17	9	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATATTATTCAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	50252744	50012213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ENSMUSG00000022641.16_13	chr16	-	4005	17	FSM	ENSMUSG00000022641.16	ENSMUST00000089404.10	4024	17	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATATAAACAAACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50252741	50016986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50140662_50140777_50151391_50151466_50249272_50249345_50252604
ENSMUSG00000022641.16_15	chr16	-	3646	16	FSM	ENSMUSG00000022641.16	ENST00000406780.5	3669	16	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAACAAGAAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	50184643	50017537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50071676_50071758_50082778_50082847_50086539_50086733_50094909_50095153_50100731_50100903_50151196_50151466_50184383
ENSMUSG00000022641.16_9	chr16	-	4499	16	FSM	ENSMUSG00000022641.16	ENSMUST00000066037.13	4523	16	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGAAAAACATAGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	50252692	50016155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_50018010_50020770_50020955_50022740_50022939_50029447_50029508_50030807_50030898_50040807_50040957_50043612_50043749_50044650_50045657_50061216_50061298_50068144_50068220_50082778_50082847_50086539_50086733_50100731_50100903_50151391_50151466_50249272_50249345_50252604
ENSMUSG00000022652.8_0	chr16	+	1431	14	FSM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCGGTGAGTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	48251720	48378852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_48251766_48257637_48257705_48266653_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731
ENSMUSG00000022652.8_8	chr16	+	1380	13	ISM	ENSMUSG00000022652.8	ENST00000232603.10	1437	14	5923	6	5923	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCGGTGAGTGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	48257643	48378852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_48257705_48266653_48266745_48269664_48269756_48270362_48270472_48272794_48272955_48281042_48281149_48300190_48300317_48319109_48319190_48320456_48320528_48322667_48322733_48330559_48330704_48334948_48335104_48378731
ENSMUSG00000022656.16_0	chr16	-	9079	9	FSM	ENSMUSG00000022656.16	ENSMUST00000023335.13	9116	9	29	8	29	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTATTTTTTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	46317301	46208076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_46215636_46216442_46216506_46256716_46256802_46258292_46258432_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ENSMUSG00000022656.16_1	chr16	-	3041	6	FSM	ENSMUSG00000022656.16	ENSMUST00000023334.15	3062	6	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGGAAACATATCATG	NA	NA	NA	NA	NA	NA	NA	NA	46317324	46267546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_46269332_46274986_46275139_46278476_46278595_46279177_46279475_46284180_46284523_46316977
ENSMUSG00000022661.15_0	chr16	-	2318	6	FSM	ENSMUSG00000022661.15	ENSMUST00000163230.8	2347	6	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAGAAATAAAGAATAAC	NA	NA	NA	NA	NA	NA	NA	NA	45229406	45202516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45203821_45212607_45212752_45214955_45215229_45217331_45217659_45220584_45220667_45229218
ENSMUSG00000022663.4_0	chr16	+	2040	12	FSM	ENSMUSG00000022663.4	ENSMUST00000023343.4	2057	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTCATACACATATGC	NA	NA	NA	NA	NA	NA	NA	NA	44979156	45008893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44979535_44982768_44982811_44987342_44987393_44990228_44990300_44992008_44992117_44995611_44995662_44998592_44998675_45003018_45003054_45003183_45003340_45004044_45004173_45006528_45006598_45008022
ENSMUSG00000022664.12_0	chr16	-	4226	7	FSM	ENSMUSG00000022664.12	ENSMUST00000023344.10	4233	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTAGCCTTGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	44979062	44959935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971950_44972939_44973039_44977823_44978010_44978744
ENSMUSG00000022664.12_1	chr16	-	1400	7	FSM	ENSMUSG00000022664.12	ENST00000492406.6	1414	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTACCTGGTTGGTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	44978853	44962509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44962576_44963983_44964765_44967630_44967699_44971815_44971947_44972939_44973039_44977823_44977970_44978744
ENSMUSG00000022665.16_0	chr16	+	4064	9	FSM	ENSMUSG00000022665.16	ENSMUST00000099498.10	4083	9	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCCATAGCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44913985	44948432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44914233_44914391_44914789_44915234_44917121_44924742_44924900_44936608_44936746_44938463_44938613_44943209_44943314_44946484_44946566_44947526
ENSMUSG00000022665.16_8	chr16	+	3627	8	FSM	ENSMUSG00000022665.16	ENSMUST00000061050.6	3648	8	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGACACAAAAGGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	44914423	44948274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44914789_44915234_44917121_44924742_44924900_44936608_44936746_44938463_44938613_44943209_44943314_44946484_44946566_44947526
ENSMUSG00000022668.11_0	chr16	-	3399	6	FSM	ENSMUSG00000022668.11	ENSMUST00000162512.8	3415	6	12	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	44566714	44557134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44565757_44565857_44566361
ENSMUSG00000022668.11_2	chr16	-	760	5	FSM	ENSMUSG00000022668.11	ENST00000383677.7	773	5	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAACTTGAAGGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	44566610	44559570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44559732_44560391_44560511_44562866_44562967_44564100_44564232_44566361
ENSMUSG00000022671.14_0	chr16	-	1019	3	FSM	ENSMUSG00000022671.14	ENSMUST00000023351.11	1035	3	7	9	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGAGTTCTATGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	15681204	15666313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15666594_15680261_15680408_15680611
ENSMUSG00000022671.14_2	chr16	-	749	4	FSM	ENSMUSG00000022671.14	ENSMUST00000117136.2	758	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTAGAATGAGTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	15681230	15666319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15666594_15680261_15680408_15680611_15680797_15681086
ENSMUSG00000022672.9_0	chr16	+	12639	86	FSM	ENSMUSG00000022672.9	ENSMUST00000023352.9	12647	86	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATATTTCTTCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	15455752	15660091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_15455907_15466583_15466661_15466751_15466845_15468514_15468590_15469295_15469405_15470102_15470216_15470314_15470415_15472545_15472602_15472684_15472716_15474119_15474278_15480846_15480994_15482071_15482237_15485452_15485622_15487145_15487196_15488376_15488503_15490120_15490274_15491832_15491946_15492302_15492463_15493143_15493231_15494767_15494888_15496066_15496227_15502000_15502108_15505222_15505314_15507135_15507297_15508125_15508276_15514986_15515095_15516660_15516888_15518506_15518602_15519918_15520019_15523034_15523169_15524587_15524843_15526574_15526796_15531443_15531653_15532011_15532145_15532779_15532939_15533729_15533931_15534869_15535056_15535594_15535700_15537208_15537377_15543196_15543325_15544365_15544574_15545447_15545627_15547702_15547872_15548303_15548370_15549413_15549487_15551844_15551994_15552763_15552902_15554616_15554737_15555683_15555825_15557295_15557448_15558062_15558195_15570599_15570712_15577348_15577474_15577565_15577716_15585731_15585906_15586414_15586514_15587657_15587866_15589887_15590078_15591462_15591679_15593720_15593834_15594892_15595025_15597241_15597422_15600920_15601127_15603773_15603913_15605008_15605198_15608313_15608539_15609736_15609846_15612891_15613004_15617730_15617918_15623785_15623961_15625897_15626092_15627459_15627656_15628568_15628715_15633755_15633968_15634434_15634523_15634614_15634759_15647479_15647685_15649134_15649203_15651539_15651761_15652010_15652104_15653015_15653106_15653753_15653826_15653895_15654098_15655826_15656016_15656948_15657089_15659634
ENSMUSG00000022673.6_0	chr16	-	3572	16	FSM	ENSMUSG00000022673.6	ENSMUST00000023353.4	3589	16	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATTATATGAAGTAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	15455253	15441766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15442634_15443425_15443560_15443899_15444129_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUSG00000022673.6_10	chr16	-	2227	14	FSM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCATGGCCCTCGGACT	NA	NA	NA	NA	NA	NA	NA	NA	15455046	15442541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15442634_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484_15454647_15454974
ENSMUSG00000022673.6_11	chr16	-	2154	13	ISM	ENSMUSG00000022673.6	ENST00000648407.1	2232	14	405	1	405	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCATGGCCCTCGGACT	NA	NA	NA	NA	NA	NA	NA	NA	15454645	15442541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_15442634_15445512_15445721_15446456_15446585_15447165_15447532_15448124_15448385_15449562_15449684_15449980_15450202_15452302_15452442_15452912_15453009_15453093_15453190_15453856_15453959_15454049_15454214_15454484
ENSMUSG00000022674.16_0	chr16	-	4199	4	FSM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATATTTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15412386	15370546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15374408_15394878_15395005_15398922_15399072_15412323
ENSMUSG00000022674.16_1	chr16	-	4131	3	ISM	ENSMUSG00000022674.16	ENSMUST00000115777.10	4207	4	13322	6	13270	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTATATTTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	15399066	15370546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_15374408_15394878_15395005_15398922
ENSMUSG00000022674.16_8	chr16	-	1217	3	FSM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAATAAGAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	15412371	15373387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15374408_15398922_15399072_15412323
ENSMUSG00000022674.16_9	chr16	-	1164	2	ISM	ENSMUSG00000022674.16	ENSMUST00000115776.2	1236	3	13305	19	13270	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAATAAGAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	15399066	15373387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_15374408_15398922
ENSMUSG00000022676.8_0	chr16	+	2001	3	FSM	ENSMUSG00000022676.8	ENSMUST00000023356.8	2021	3	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAAAGTAGTTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	14523727	14527241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_14523917_14524574_14525124_14525978
ENSMUSG00000022677.16_0	chr16	-	1412	5	FSM	ENSMUSG00000022677.16	ENSMUST00000120707.2	1414	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	14135211	14117109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_14118074_14122317_14122429_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000022677.16_1	chr16	-	1458	5	FSM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	14135234	14117109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679_14131878_14135157
ENSMUSG00000022677.16_3	chr16	-	1382	4	ISM	ENSMUSG00000022677.16	ENSMUST00000023357.14	1465	5	3361	2	3318	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTATGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	14131878	14117109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_14118074_14122317_14122452_14128910_14128996_14131679
ENSMUSG00000022677.16_4	chr16	-	163	3	FSM	ENSMUSG00000022677.16	ENST00000575744.5	163	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGATGGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14135196	14122412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_14122452_14128910_14128996_14135157
ENSMUSG00000022677.16_5	chr16	-	118	2	ISM	ENSMUSG00000022677.16	ENST00000575744.5	163	3	6207	0	6207	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCAGATGGAGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	14128989	14122412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_14122452_14128910
ENSMUSG00000022678.17_0	chr16	+	2260	9	FSM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	7	20	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATTGAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13981145	14010772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_1	chr16	+	2266	9	NNC	ENSMUSG00000022678.17	novel	2287	9	NA	NA	0	-10	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAATTGAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13981138	14010772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008101_14009586
ENSMUSG00000022678.17_17	chr16	+	1528	9	FSM	ENSMUSG00000022678.17	ENSMUST00000117958.8	1551	9	5	18	5	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATAAAATAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	13981155	14010674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14010205
ENSMUSG00000022678.17_33	chr16	+	2322	9	FSM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAATTGAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13981208	14010769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13981233_13987315_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUSG00000022678.17_40	chr16	+	2172	8	ISM	ENSMUSG00000022678.17	ENSMUST00000023359.13	2287	9	6176	22	6106	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAATTGAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13987314	14010770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009581
ENSMUSG00000022678.17_47	chr16	+	2286	8	ISM	ENSMUSG00000022678.17	ENSMUST00000115795.9	2335	9	6119	13	6119	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATAATTGAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13987327	14010769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_13987440_13988201_13988356_13993154_13993304_14001339_14001477_14003557_14003738_14006176_14006269_14007950_14008097_14009453
ENSMUSG00000022679.14_0	chr16	+	3058	4	FSM	ENSMUSG00000022679.14	ENSMUST00000128757.8	3089	4	24	7	24	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13721048	13767476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13721145_13762529_13762601_13764421_13764452_13764615
ENSMUSG00000022679.14_1	chr16	+	3056	4	FSM	ENSMUSG00000022679.14	ENSMUST00000023360.14	3087	4	2	29	2	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATATTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13758530	13767213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13758888_13762529_13762601_13764421_13764452_13764615
ENSMUSG00000022680.15_0	chr16	-	4216	24	FSM	ENSMUSG00000022680.15	ENSMUST00000023361.12	4228	24	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGTAAATTCTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	13720986	13651018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13652711_13654249_13654480_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUSG00000022680.15_10	chr16	-	2439	14	FSM	ENSMUSG00000022680.15	ENSMUST00000115802.2	2466	14	27	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGCACTAATAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	13720968	13667140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13668271_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUSG00000022680.15_8	chr16	-	2875	23	FSM	ENSMUSG00000022680.15	ENSMUST00000115804.9	2880	23	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGCTTTTGTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	13720880	13652023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13652711_13654906_13655012_13655959_13656057_13656165_13656259_13657095_13657218_13657500_13657620_13658150_13658323_13661634_13661741_13663198_13663288_13665589_13665654_13672258_13672310_13675240_13675367_13676720_13676823_13676973_13677023_13677817_13677903_13687666_13687746_13690318_13690388_13693841_13694032_13697289_13697437_13699741_13699823_13702429_13702496_13705560_13705635_13720778
ENSMUSG00000022681.16_0	chr16	+	1153	10	FSM	ENSMUSG00000022681.16	ENSMUST00000023362.15	1175	10	13	9	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCAATTTGTTTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13637127	13653306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13637301_13644746_13644850_13644923_13644990_13645251_13645361_13646868_13646943_13648981_13649036_13649470_13649525_13650200_13650299_13652544_13652659_13652998
ENSMUSG00000022682.9_0	chr16	+	3573	18	FSM	ENSMUSG00000022682.9	ENSMUST00000023363.8	3582	18	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTACTGTGTTGAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	13598585	13632703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13598704_13599856_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13616475_13616615_13617749_13617881_13622812_13622944_13624422_13624608_13626845_13626955_13628367_13628521_13629385_13629474_13630953
ENSMUSG00000022682.9_18	chr16	+	1065	11	FSM	ENSMUSG00000022682.9	ENST00000551901.6	1079	11	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGGTCAGTTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	13599869	13624600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13599963_13601936_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13622812_13622944_13624422
ENSMUSG00000022682.9_26	chr16	+	974	10	ISM	ENSMUSG00000022682.9	ENST00000551901.6	1079	11	2070	9	2070	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAGGTCAGTTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	13601934	13624600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_13601994_13606641_13606732_13606823_13606954_13607396_13607457_13608484_13608549_13609783_13609854_13610811_13610911_13613848_13613942_13622812_13622944_13624422
ENSMUSG00000022684.16_0	chr16	+	2980	8	FSM	ENSMUSG00000022684.16	ENSMUST00000023365.13	3003	8	11	12	11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAATACAACCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	13489732	13521464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13489943_13502925_13503263_13505254_13505460_13506619_13506790_13510296_13510442_13515196_13515371_13516736_13516940_13519928
ENSMUSG00000022685.10_0	chr16	-	2885	24	FSM	ENSMUSG00000022685.10	ENSMUST00000058884.10	2906	24	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTCTGCCTTTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	13486017	13355827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13356767_13358918_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485874
ENSMUSG00000022685.10_22	chr16	-	1346	16	FSM	ENSMUSG00000022685.10	ENST00000539279.5	1346	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCAGGTTGGTATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	13485929	13358926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13483765_13483846_13485397_13485476_13485874
ENSMUSG00000022685.10_25	chr16	-	1277	15	ISM	ENSMUSG00000022685.10	ENST00000539279.5	1346	16	468	0	468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCAGGTTGGTATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	13485461	13358926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13483765_13483846_13485397
ENSMUSG00000022685.10_32	chr16	-	1878	23	FSM	ENSMUSG00000022685.10	ENST00000341484.11	1882	23	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCAGGTTGGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	13486031	13358927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13359113_13384433_13384603_13420891_13420967_13424011_13424099_13425114_13425171_13443372_13443443_13443977_13444089_13446237_13446314_13447446_13447490_13449393_13449438_13458116_13458195_13465106_13465164_13466282_13466364_13468498_13468542_13469661_13469701_13470508_13470575_13472312_13472458_13474779_13474841_13482519_13482602_13482684_13482753_13483765_13483846_13485397_13485476_13485947
ENSMUSG00000022687.13_0	chr16	-	4461	20	FSM	ENSMUSG00000022687.13	ENST00000682979.1	4478	20	9	8	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCATCTTAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	44379199	44305419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521_44341691_44374492_44374577_44378800
ENSMUSG00000022687.13_19	chr16	-	953	4	FSM	ENSMUSG00000022687.13	ENST00000485230.5	962	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGTGCAGTGTGACCTC	NA	NA	NA	NA	NA	NA	NA	NA	44379190	44340568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44340867_44341521_44341699_44374488_44374577_44378800
ENSMUSG00000022687.13_6	chr16	-	3969	18	FSM	ENSMUSG00000022687.13	ENST00000273395.8	3980	18	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCATCTTAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	44341681	44305419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_44306163_44307074_44307266_44307712_44307793_44307979_44308216_44308872_44309095_44310502_44310626_44310939_44311046_44311534_44311717_44312055_44312263_44312670_44312782_44313175_44313339_44316614_44316923_44319763_44320037_44320712_44321007_44322008_44322153_44323891_44324039_44340587_44340867_44341521
ENSMUSG00000022698.18_0	chr16	+	3751	6	FSM	ENSMUSG00000022698.18	ENSMUST00000159514.8	3756	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATCTGTCTGTAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	43960197	43982837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43960475_43965143_43965282_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_1	chr16	+	4473	5	FSM	ENSMUSG00000022698.18	ENSMUST00000161326.8	4487	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGATTCAAAGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	43960222	43983722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43960475_43976772_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_2	chr16	+	3544	5	FSM	ENSMUSG00000022698.18	ENSMUST00000063520.15	3557	5	13	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGATCTGTCTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	43960261	43982835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43960475_43976775_43976910_43977436_43977557_43978242_43978310_43979825
ENSMUSG00000022698.18_3	chr16	+	2119	4	FSM	ENSMUSG00000022698.18	ENSMUST00000063542.8	2136	4	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAGTAAAATTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	43960259	43981525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43960475_43976772_43976910_43978242_43978310_43979825
ENSMUSG00000022701.19_0	chr16	+	3773	17	FSM	ENSMUSG00000022701.19	ENSMUST00000132859.8	3779	17	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAATGTGCTCGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	43710162	43784671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43710402_43712515_43712555_43718452_43718595_43725713_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUSG00000022701.19_1	chr16	+	3725	16	FSM	ENSMUSG00000022701.19	ENSMUST00000178400.9	3745	16	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGAATGTGCTCGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	43710176	43784671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43710402_43718452_43718595_43725708_43725847_43727150_43727330_43728774_43728999_43735812_43735967_43751556_43751748_43759276_43759527_43763866_43764328_43765001_43765094_43767031_43767115_43767789_43767892_43777180_43777325_43779578_43779732_43780380_43780527_43783630
ENSMUSG00000022702.17_0	chr16	+	3376	21	FSM	ENSMUSG00000022702.17	ENST00000340170.8	3393	21	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAACCATTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	18696031	18789051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18696270_18713523_18713587_18715203_18715315_18716447_18716539_18718112_18718208_18729397_18729494_18730795_18730957_18735189_18735358_18737725_18737840_18741066_18741138_18741603_18741710_18744397_18744614_18746187_18746274_18751617_18751813_18753767_18753930_18770406_18770466_18770813_18770920_18772744_18772868_18773359_18773524_18774918_18775008_18788189
ENSMUSG00000022704.17_0	chr16	-	2803	8	FSM	ENSMUSG00000022704.17	ENSMUST00000023387.14	2838	8	23	12	23	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAAAAAACCCCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43710025	43681781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_43683665_43687772_43687891_43689308_43689461_43691983_43692184_43698319_43698397_43700661_43700718_43701355_43701577_43709929
ENSMUSG00000022705.6_0	chr16	+	1470	8	FSM	ENSMUSG00000022705.6	ENST00000295881.9	1489	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGAGAAGAGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	43574296	43643201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740_43627884_43637328_43637526_43641645_43641779_43641877_43641926_43643005
ENSMUSG00000022705.6_5	chr16	+	2244	7	FSM	ENSMUSG00000022705.6	ENST00000383673.5	2266	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGGCCCTCTGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43574297	43643877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43574633_43582570_43582875_43610960_43611074_43627740_43627884_43637328_43637526_43641645_43641926_43643005
ENSMUSG00000022706.17_0	chr16	-	1259	4	FSM	ENSMUSG00000022706.17	ENSMUST00000023391.16	1280	4	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAAAGTATCTGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	18695601	18690777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18691413_18692286_18692446_18694073_18694158_18695220
ENSMUSG00000022707.17_0	chr16	+	2966	16	NIC	ENSMUSG00000022707.17	novel	2984	16	NA	NA	10	-6	intron_retention	TRUE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCATTGACTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	70110846	70366596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767_70325899_70357911_70358030_70365876
ENSMUSG00000022707.17_11	chr16	+	3289	14	FSM	ENSMUSG00000022707.17	ENSMUST00000171132.8	3303	14	14	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	70110965	70327178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_70111184_70157745_70157916_70198621_70198738_70230432_70230559_70231401_70231538_70233815_70233907_70237997_70238208_70275193_70275310_70280708_70280837_70284915_70285015_70288821_70288933_70292115_70292288_70324004_70324190_70325767
ENSMUSG00000022708.17_0	chr16	+	26890	15	FSM	ENSMUSG00000022708.17	ENSMUST00000114694.9	26901	15	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAATAATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42728014	43462954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_42728085_42827380_42827450_42845300_42845351_42892786_42892833_42967259_42967307_43013827_43013902_43053121_43053184_43122931_43122979_43283309_43283350_43390043_43390145_43392096_43392155_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ENSMUSG00000022708.17_11	chr16	+	2780	5	FSM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAACCCTTCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	43390051	43439415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43390145_43397392_43397557_43397923_43398112_43429689_43431295_43438685
ENSMUSG00000022708.17_13	chr16	+	2687	4	ISM	ENSMUSG00000022708.17	ENST00000676079.1	2799	5	7349	11	7349	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAACCCTTCTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	43397392	43439415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_43397557_43397923_43398112_43429689_43431295_43438685
ENSMUSG00000022708.17_6	chr16	+	2854	7	FSM	ENSMUSG00000022708.17	ENSMUST00000114691.8	2891	7	10	27	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACAAAAAACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	43067656	43439432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43067783_43122931_43122979_43283309_43283350_43390043_43390145_43397923_43398112_43429689_43431295_43438685
ENSMUSG00000022710.18_1	chr16	-	4665	31	ISM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	35242	1	-18724	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGCTGTGGAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	8574930	8507459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679
ENSMUSG00000022710.18_12	chr16	-	3975	31	FSM	ENSMUSG00000022710.18	ENSMUST00000161046.9	4003	31	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTTATACACTGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	8556182	8508013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8556067
ENSMUSG00000022710.18_2	chr16	-	4734	32	FSM	ENSMUSG00000022710.18	ENSMUST00000160405.8	4745	32	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCGATGACTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8610170	8507467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_8508751_8509009_8509101_8509218_8509291_8509419_8509540_8510243_8510344_8510881_8510983_8511565_8511644_8511733_8511843_8512276_8512345_8512894_8513049_8513679_8513781_8514540_8514609_8514690_8514784_8515453_8515560_8515756_8515859_8516315_8516451_8516583_8516715_8517006_8517152_8517909_8518067_8519825_8519936_8521327_8521411_8522791_8522883_8522967_8523049_8523949_8524005_8524462_8524594_8525501_8525611_8526722_8526812_8527902_8528042_8529857_8530057_8534378_8534484_8574679_8574937_8610099
ENSMUSG00000022711.17_0	chr16	+	1824	9	FSM	ENSMUSG00000022711.17	ENSMUST00000023396.10	1842	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGTACATGATTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	8455547	8475387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_8455693_8460601_8460714_8463232_8463310_8464036_8464129_8466511_8466612_8466745_8466822_8469273_8469390_8473414_8473553_8474419
ENSMUSG00000022711.17_3	chr16	+	382	4	FSM	ENSMUSG00000022711.17	ENST00000569958.5	388	4	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTCTTCCCTTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	8460604	8473499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_8460714_8466749_8466822_8469273_8469390_8473414
ENSMUSG00000022718.13_0	chr16	-	4296	14	FSM	ENSMUSG00000022718.13	ENSMUST00000009321.11	4320	14	15	9	15	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGAATGGCTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	18107095	18071820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18073470_18074535_18074650_18076057_18076186_18077412_18077520_18077742_18077844_18090584_18090668_18095029_18095129_18095902_18096005_18096182_18096381_18098083_18098367_18098477_18098621_18100987_18101148_18101560_18102561_18106966
ENSMUSG00000022721.20_0	chr16	+	2347	12	FSM	ENSMUSG00000022721.20	ENSMUST00000115640.8	2367	12	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATTTCTGTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	18066759	18071359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUSG00000022721.20_11	chr16	+	2224	12	FSM	ENSMUSG00000022721.20	ENSMUST00000100099.10	2235	12	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATTTCTGTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	18066929	18071359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18067163_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070582_18070700_18070787_18070885_18070963
ENSMUSG00000022721.20_5	chr16	+	3476	11	FSM	ENSMUSG00000022721.20	ENSMUST00000140206.8	3520	11	28	16	28	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTGATGAACAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	18066774	18072620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18067116_18067349_18067898_18068317_18068427_18068683_18068866_18069019_18069135_18069222_18069339_18069412_18069525_18069989_18070113_18070265_18070342_18070787_18070885_18070963
ENSMUSG00000022722.19_0	chr16	-	1683	8	FSM	ENSMUSG00000022722.19	ENSMUST00000023405.16	1696	8	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGACTTATTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	59459524	59433318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_59434208_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUSG00000022722.19_2	chr16	-	1519	9	FSM	ENSMUSG00000022722.19	ENSMUST00000099646.10	1554	9	17	18	17	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAATAAAAAATGAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	59459737	59433708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_59434208_59439028_59439042_59439157_59439214_59441581_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452824_59459292
ENSMUSG00000022722.19_3	chr16	-	805	6	FSM	ENSMUSG00000022722.19	ENST00000394206.5	827	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTGGTAAAAAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	59459563	59441588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_59441712_59443383_59443479_59444240_59444310_59444642_59444705_59452673_59452859_59459292
ENSMUSG00000022723.17_0	chr16	-	6538	19	FSM	ENSMUSG00000022723.17	ENSMUST00000044604.16	6544	19	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGAGAAATACAAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59376114	59311142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_59314049_59315029_59315190_59315972_59316132_59323487_59323612_59326543_59326684_59342446_59342577_59345223_59345334_59349585_59349619_59350466_59350594_59350693_59350840_59357060_59357188_59360167_59360302_59362422_59362459_59363538_59363654_59364391_59364529_59370764_59370913_59372534_59372651_59372892_59372938_59374469
ENSMUSG00000022724.16_0	chr16	+	2133	10	FSM	ENSMUSG00000022724.16	ENSMUST00000023407.12	2159	10	7	19	7	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATTGGAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59292144	59312805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_59292309_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ENSMUSG00000022724.16_8	chr16	+	2210	10	FSM	ENSMUSG00000022724.16	ENSMUST00000160571.2	2244	10	30	4	30	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATGAAAATATACATATC	NA	NA	NA	NA	NA	NA	NA	NA	59292460	59312650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_59292857_59295872_59296333_59299532_59299653_59300653_59300783_59303367_59303472_59306895_59306999_59307790_59307963_59309707_59309797_59311567_59311658_59312103
ENSMUSG00000022742.7_0	chr16	+	3084	7	FSM	ENSMUSG00000022742.7	ENSMUST00000060077.7	3097	7	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATAACATAAGAAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	58490655	58500737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_58491314_58492890_58493035_58493698_58493810_58494742_58494885_58495604_58495824_58498307_58498413_58499032
ENSMUSG00000022744.13_0	chr16	+	2133	5	FSM	ENSMUSG00000022744.13	ENSMUST00000023426.12	2147	5	11	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGTTTGAGATCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	58548283	58554611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_58548448_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_11	chr16	+	644	4	FSM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAAAGCCCCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	58548390	58553539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_58548448_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_17	chr16	+	581	3	ISM	ENSMUSG00000022744.13	ENST00000511081.5	647	4	3280	3	3280	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTAAAAGCCCCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	58551670	58553539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_58551776_58552943_58553082_58553201
ENSMUSG00000022744.13_5	chr16	+	2113	6	FSM	ENSMUSG00000022744.13	ENST00000394185.6	2139	6	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAATAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58548331	58554573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_58548448_58549520_58549587_58549800_58550111_58551664_58551776_58552943_58553082_58553201
ENSMUSG00000022747.18_0	chr16	-	4093	11	FSM	ENSMUSG00000022747.18	ENSMUST00000137035.8	4123	11	17	13	17	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAATTAAAGCAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	58343772	58288500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_58291091_58292673_58292827_58293771_58293910_58294016_58294204_58296212_58296309_58305125_58305190_58306757_58306862_58309266_58309345_58314042_58314225_58327810_58327978_58343438
ENSMUSG00000022747.18_1	chr16	-	1911	12	FSM	ENSMUSG00000022747.18	ENSMUST00000114357.10	1918	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTAAGTCCGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58344548	58290581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_58291091_58292673_58292827_58293771_58293910_58294016_58294204_58296212_58296309_58305125_58305190_58306757_58306862_58309266_58309345_58314042_58314225_58327810_58327978_58343864_58344036_58344486
ENSMUSG00000022747.18_2	chr16	-	1846	11	ISM	ENSMUSG00000022747.18	ENSMUST00000114357.10	1918	12	517	6	-242	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTAAGTCCGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	58344031	58290580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_58291091_58292673_58292827_58293771_58293910_58294016_58294204_58296212_58296309_58305125_58305190_58306757_58306862_58309266_58309345_58314042_58314225_58327810_58327978_58343864
ENSMUSG00000022748.9_1	chr16	-	505	2	FSM	ENSMUSG00000022748.9	ENSMUST00000232413.2	529	2	13	11	-5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACCACTAAGATTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	57427214	57381806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_57382126_57427028
ENSMUSG00000022748.9_4	chr16	-	1144	10	NNC	ENSMUSG00000022748.9	novel	1150	10	NA	NA	6	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACAGTTTCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57427203	57122365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143910_57427028
ENSMUSG00000022748.9_7	chr16	-	1140	10	FSM	ENSMUSG00000022748.9	ENSMUST00000114371.5	1150	10	7	3	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGACAGTTTCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	57427202	57122365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_57122646_57124042_57124132_57127188_57127277_57127731_57127793_57131615_57131719_57133020_57133081_57136524_57136655_57138268_57138344_57143826_57143907_57427028
ENSMUSG00000022749.9_0	chr16	-	3567	18	FSM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	3	7	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57051744	56989228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019082_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUSG00000022749.9_1	chr16	-	3496	17	ISM	ENSMUSG00000022749.9	ENST00000344949.9	3577	18	12967	7	11	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57038780	56989228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019082_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671
ENSMUSG00000022749.9_57	chr16	-	1857	17	FSM	ENSMUSG00000022749.9	ENST00000475134.1	1874	17	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTTAAGTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	57038786	56990713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57001854_57001900_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019082_57019134_57019221_57019347_57028566_57028691_57034526_57034633_57038671
ENSMUSG00000022749.9_6	chr16	-	3620	19	FSM	ENSMUSG00000022749.9	ENST00000394144.9	3628	19	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTGCCCTGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	57051752	56989228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56990804_56991985_56992181_56993386_56993523_56998294_56998384_57001854_57001900_57003213_57003354_57004742_57004850_57007000_57007044_57009624_57009796_57011836_57011930_57012971_57013095_57018643_57018748_57019082_57019134_57019221_57019347_57028566_57028691_57032733_57032939_57034526_57034633_57038671_57038784_57051676
ENSMUSG00000022750.19_1	chr16	+	2537	7	FSM	ENSMUSG00000022750.19	ENSMUST00000165790.9	2544	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGCAAAAGGTGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	17577540	17611221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17577571_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_4	chr16	+	2585	7	FSM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAATGTGGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	17580657	17611238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17580719_17582247_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022750.19_7	chr16	+	2525	6	ISM	ENSMUSG00000022750.19	ENSMUST00000120488.3	2596	7	1592	8	1592	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTAATGTGGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	17582246	17611238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_17582511_17589567_17589734_17594265_17594985_17602066_17602260_17607000_17607235_17610289
ENSMUSG00000022751.10_0	chr16	-	1278	10	FSM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	0	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATATATTTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	56987695	56977035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460_56986580_56987643
ENSMUSG00000022751.10_1	chr16	-	1220	9	ISM	ENSMUSG00000022751.10	ENSMUST00000023432.10	1286	10	1122	8	1122	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATATATTTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	56986573	56977035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_56977530_56977846_56977903_56979780_56979880_56980429_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560_56984682_56986460
ENSMUSG00000022751.10_15	chr16	-	646	8	FSM	ENSMUSG00000022751.10	ENST00000265259.5	665	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGGAATCAAAGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	56984671	56977461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56977530_56977846_56977883_56979776_56979880_56980438_56980509_56981492_56981568_56982053_56982148_56983880_56983970_56984560
ENSMUSG00000022752.10_0	chr16	+	5946	12	FSM	ENSMUSG00000022752.10	ENSMUST00000166897.3	5964	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTCATGTTGATGGG	NA	NA	NA	NA	NA	NA	NA	NA	56942076	56977061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_56942558_56953439_56953614_56955015_56955143_56957060_56957171_56958392_56958542_56960941_56961150_56963083_56963219_56965053_56965162_56966392_56966510_56968095_56968194_56970182_56970306_56972945
ENSMUSG00000022754.7_0	chr16	-	2690	6	FSM	ENSMUSG00000022754.7	ENSMUST00000023435.6	2701	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGTGGTTGTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	56706518	56625523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56627140_56631888_56632035_56642587_56642773_56643750_56643958_56646028_56646222_56706175
ENSMUSG00000022756.18_0	chr16	-	3277	5	FSM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTGGCTTTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	17394584	17389884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17393830_17394503
ENSMUSG00000022756.18_1	chr16	-	3181	4	ISM	ENSMUSG00000022756.18	ENSMUST00000172164.10	3281	5	765	9	699	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTACTACTTCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	17393820	17389890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815
ENSMUSG00000022756.18_2	chr16	-	1640	5	ISM	ENSMUSG00000022756.18	ENSMUST00000232385.2	1714	6	744	1	701	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTGGTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	17393818	17390814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17392866_17393480
ENSMUSG00000022756.18_3	chr16	-	1711	6	FSM	ENSMUSG00000022756.18	ENSMUST00000232385.2	1714	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTACACTGTGGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	17394562	17390816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17391317_17391419_17391529_17391809_17392451_17392815_17392866_17393480_17393833_17394503
ENSMUSG00000022757.20_1	chr16	-	1960	9	FSM	ENSMUSG00000022757.20	ENST00000620299.5	1972	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56537794	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_10	chr16	-	1930	8	FSM	ENSMUSG00000022757.20	ENSMUST00000065515.14	1945	8	8	7	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56537805	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022757.20_11	chr16	-	1642	7	FSM	ENSMUSG00000022757.20	ENST00000675047.1	1656	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56533185	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_12	chr16	-	1989	8	FSM	ENSMUSG00000022757.20	ENST00000674615.1	2004	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATCCAACTGTGGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56537773	56510702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533282_56537533
ENSMUSG00000022757.20_3	chr16	-	1694	8	FSM	ENSMUSG00000022757.20	ENST00000675543.1	1709	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56533184	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517821_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_4	chr16	-	1681	8	FSM	ENSMUSG00000022757.20	ENST00000676111.1	1697	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56533183	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56512238_56512280_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973
ENSMUSG00000022757.20_7	chr16	-	1956	8	FSM	ENSMUSG00000022757.20	ENST00000674758.1	1972	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56537751	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56514762_56514853_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533282_56537533
ENSMUSG00000022757.20_8	chr16	-	1895	8	FSM	ENSMUSG00000022757.20	ENST00000675890.1	1914	8	13	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAACTGTGGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	56537787	56510701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_56511517_56514762_56514848_56517833_56517960_56521431_56521600_56524789_56524937_56525973_56526058_56532973_56533204_56537547
ENSMUSG00000022758.15_0	chr16	+	2331	12	FSM	ENSMUSG00000022758.15	ENSMUST00000023441.11	2345	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAGAAGTAGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	17379756	17389869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17380048_17380584_17380736_17382819_17382892_17385301_17385378_17385569_17385664_17385736_17385818_17385896_17386039_17386124_17386235_17388221_17388316_17388396_17388463_17388602_17388681_17388793
ENSMUSG00000022760.18_0	chr16	-	1234	5	FSM	ENSMUSG00000022760.18	ENSMUST00000100125.12	1248	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGGTTAAATCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17348992	17345851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348888
ENSMUSG00000022760.18_2	chr16	-	1031	4	ISM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	190	9	190	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAGACTGCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	17348721	17345950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641
ENSMUSG00000022760.18_4	chr16	-	1099	5	FSM	ENSMUSG00000022760.18	ENSMUST00000231548.2	1110	5	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGAGACTGCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	17348909	17345950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17346605_17346798_17346940_17348093_17348250_17348641_17348722_17348841
ENSMUSG00000022761.13_0	chr16	+	3375	21	FSM	ENSMUSG00000022761.13	ENSMUST00000023444.11	3394	21	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTAACCTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	17326561	17344188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17327083_17327489_17327553_17329929_17329987_17333671_17333752_17333837_17333947_17335319_17335404_17336380_17336439_17337250_17337391_17338299_17338502_17338754_17338911_17339308_17339420_17340020_17340114_17340244_17340341_17340421_17340588_17340831_17341002_17341140_17341298_17341959_17342087_17342171_17342322_17343102_17343209_17343286_17343368_17343540
ENSMUSG00000022765.11_0	chr16	+	3411	5	FSM	ENSMUSG00000022765.11	ENSMUST00000023449.11	3447	5	16	20	16	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTAAAAAAAAAAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	17223865	17248671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17224224_17237127_17237325_17240329_17240416_17244900_17245006_17246006
ENSMUSG00000022769.10_0	chr16	-	1093	3	FSM	ENSMUSG00000022769.10	ENSMUST00000023453.10	1108	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTAAGTGTGAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	16950240	16948009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16948653_16949460_16949658_16949987
ENSMUSG00000022770.18_158	chr16	+	2799	22	ISM	ENSMUSG00000022770.18	ENST00000422288.6	2870	23	766	9	763	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTAAGGGAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	31484400	31690860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_159	chr16	+	3454	22	ISM	ENSMUSG00000022770.18	ENST00000667971.1	3518	23	764	4	761	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAATAACTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	31484398	31691435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_160	chr16	+	4174	24	ISM	ENSMUSG00000022770.18	ENST00000656087.1	4243	25	762	11	759	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAATAAACTTTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31484396	31692141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_161	chr16	+	2652	23	ISM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	764	4	762	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGACGGATGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31484399	31690595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_162	chr16	+	4253	23	ISM	ENSMUSG00000022770.18	ENST00000667157.1	4315	24	763	3	763	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTTTTTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	31484400	31692194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_235	chr16	+	3715	22	FSM	ENSMUSG00000022770.18	ENST00000660553.1	3730	22	7	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAATAGACAGACAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	31573601	31691852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31573835_31590574_31590674_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_50	chr16	+	2861	23	FSM	ENSMUSG00000022770.18	ENST00000422288.6	2870	23	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTTAAGGGAAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	31483634	31690860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_58	chr16	+	2710	24	FSM	ENSMUSG00000022770.18	ENST00000656944.1	2716	24	2	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGACGGATGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	31483637	31690595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665654_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_62	chr16	+	3514	23	FSM	ENSMUSG00000022770.18	ENST00000667971.1	3518	23	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAATAACTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	31483634	31691435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_69	chr16	+	4232	25	FSM	ENSMUSG00000022770.18	ENST00000656087.1	4243	25	0	11	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAATAAACTTTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31483634	31692141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31666453_31666488_31672660_31672703_31673470_31673507_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_97	chr16	+	4207	23	FSM	ENSMUSG00000022770.18	ENST00000661336.1	4218	23	0	11	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAATAAACTTTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31483635	31692141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022770.18_98	chr16	+	4312	24	FSM	ENSMUSG00000022770.18	ENST00000667157.1	4315	24	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTGTTTTTAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	31483637	31692194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31483689_31484392_31484525_31502945_31503113_31561923_31562089_31600599_31600654_31606899_31606951_31608994_31609120_31610532_31610703_31612321_31612459_31615683_31615829_31624431_31624553_31631485_31631643_31648283_31648387_31655007_31655123_31656867_31657045_31661587_31661658_31665651_31665752_31672660_31672703_31675258_31675310_31676364_31676467_31676709_31676883_31681990_31682101_31686648_31686741_31690492
ENSMUSG00000022771.18_0	chr16	-	2313	21	FSM	ENSMUSG00000022771.18	ENSMUST00000023455.14	2333	21	12	8	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGTGGCGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	16929109	16904426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16905078_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022771.18_2	chr16	-	2183	21	FSM	ENSMUSG00000022771.18	ENSMUST00000164458.10	2190	21	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAAGTGGCGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	16929077	16904426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16904980_16906608_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022771.18_4	chr16	-	3084	20	FSM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	16929102	16905179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508_16927559_16929006
ENSMUSG00000022771.18_5	chr16	-	2988	19	ISM	ENSMUSG00000022771.18	ENSMUST00000231712.2	3088	20	1548	0	1519	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	16927558	16905179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_16906731_16907008_16907146_16907291_16907355_16907444_16907518_16907965_16908023_16909038_16909157_16909719_16909754_16910078_16910169_16910548_16910656_16910874_16910951_16912746_16912908_16913868_16913945_16914568_16914659_16915219_16915312_16918119_16918172_16921439_16921492_16923856_16923920_16925042_16925089_16927508
ENSMUSG00000022772.13_0	chr16	-	6317	10	FSM	ENSMUSG00000022772.13	ENSMUST00000231360.2	6332	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACATGTGTTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31822095	31778494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821809
ENSMUSG00000022772.13_3	chr16	-	3360	10	FSM	ENSMUSG00000022772.13	ENSMUST00000023457.13	3370	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTTAATTTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	31821981	31781333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31782356_31783087_31783139_31784562_31784647_31787617_31787756_31796497_31796576_31802081_31802130_31802310_31802450_31802585_31802692_31807757_31809284_31821813
ENSMUSG00000022773.20_0	chr16	+	3298	5	FSM	ENSMUSG00000022773.20	ENSMUST00000035682.16	3322	5	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCAAGTGTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	16887576	16904593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16888228_16895638_16895919_16899461_16899506_16899931_16900041_16902379
ENSMUSG00000022773.20_1	chr16	+	3309	5	NNC	ENSMUSG00000022773.20	novel	3322	5	NA	NA	10	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCAAGTGTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	16887569	16904593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_+_16888228_16895638_16895923_16899461_16899506_16899931_16900041_16902379
ENSMUSG00000022774.14_0	chr16	+	2052	4	FSM	ENSMUSG00000022774.14	ENSMUST00000023460.7	2070	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTCTGTGTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31767342	31777284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31767546_31772942_31773125_31775108_31775248_31775756
ENSMUSG00000022779.17_0	chr16	+	2941	19	FSM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16688628	16710848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16688694_16692935_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022779.17_5	chr16	+	3059	18	FSM	ENSMUSG00000022779.17	ENSMUST00000023465.16	3073	18	8	6	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16688652	16710848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16688920_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022779.17_8	chr16	+	2867	18	ISM	ENSMUSG00000022779.17	ENSMUST00000232581.2	2950	19	4324	1	4300	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGAGCCTGGGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	16692944	16710848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_16693020_16695695_16695881_16696820_16696953_16697182_16697290_16698467_16698543_16700364_16700562_16701270_16701428_16702102_16702217_16703698_16703790_16704468_16704624_16704743_16704850_16705440_16705588_16705695_16705870_16707346_16707476_16707975_16708126_16708445_16708547_16709218_16709421_16710278
ENSMUSG00000022781.9_0	chr16	-	5731	15	FSM	ENSMUSG00000022781.9	ENSMUST00000023467.9	5741	15	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAATTTCCATTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31898150	31835107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31839085_31840591_31840730_31841906_31842104_31846529_31846630_31850401_31850520_31852604_31852718_31853712_31853762_31856062_31856127_31858616_31858750_31860285_31860394_31861963_31861996_31862670_31862819_31863298_31863400_31870993_31871202_31897905
ENSMUSG00000022783.12_0	chr16	-	1550	9	ISM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	122	14	122	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACATTAAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	16646967	16571468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883
ENSMUSG00000022783.12_1	chr16	-	1593	10	FSM	ENSMUSG00000022783.12	ENST00000313311.10	1607	10	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACATTAAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	16647089	16571468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16571742_16584832_16584950_16595186_16595379_16598484_16598638_16599608_16599783_16601598_16601805_16605078_16605263_16610360_16610528_16646883_16646980_16647058
ENSMUSG00000022787.11_0	chr16	+	1148	3	FSM	ENSMUSG00000022787.11	ENSMUST00000178573.8	1153	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGCAAAAACCAACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32066044	32075887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32066086_32070640_32071137_32075276
ENSMUSG00000022787.11_1	chr16	+	1373	3	FSM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	7	14	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGCAAAAACCAACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32066077	32075887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32066344_32070640_32071137_32075276
ENSMUSG00000022787.11_3	chr16	+	1102	2	ISM	ENSMUSG00000022787.11	ENSMUST00000023474.4	1394	3	4575	14	4575	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGCAAAAACCAACAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32070645	32075887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_32071137_32075276
ENSMUSG00000022788.17_0	chr16	-	2727	17	FSM	ENSMUSG00000022788.17	ENST00000682739.1	2747	17	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATATGGTTTCATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	16378107	16240334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16240685_16241779_16241921_16243630_16243772_16253804_16253931_16254396_16254490_16254873_16254905_16271855_16272029_16279457_16279605_16279864_16279924_16287567_16287707_16292090_16292248_16292879_16293026_16295287_16295378_16301953_16302257_16308286_16308538_16321907_16322081_16377900
ENSMUSG00000022789.16_0	chr16	-	3933	18	FSM	ENSMUSG00000022789.16	ENSMUST00000023477.15	3951	18	10	8	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGTGAATTCTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	16176813	16130101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_12	chr16	-	3116	19	FSM	ENSMUSG00000022789.16	ENST00000452533.6	3132	19	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAGTTCCACGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	16176877	16131015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136308_16136342_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022789.16_22	chr16	-	2340	19	FSM	ENSMUSG00000022789.16	ENST00000547312.5	2358	19	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATATTATTCGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	16176766	16131725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16131908_16132127_16132288_16134197_16134308_16134465_16134643_16136627_16136706_16137315_16137373_16139447_16139541_16141193_16141284_16141485_16141642_16141838_16141960_16147666_16147874_16149864_16149997_16151692_16151814_16154716_16154880_16156456_16156544_16158859_16158932_16159285_16159333_16163861_16164010_16176627
ENSMUSG00000022790.15_0	chr16	+	3418	7	FSM	ENSMUSG00000022790.15	ENSMUST00000023478.8	3443	7	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATATAAAACATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	38722690	38847509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38722922_38827495_38827660_38829146_38829355_38831578_38831735_38842727_38842851_38843591_38843743_38845124
ENSMUSG00000022791.20_0	chr16	+	4182	15	FSM	ENSMUSG00000022791.20	ENSMUST00000115123.9	4226	15	38	6	38	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTACTCTCGCGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	32463681	32502305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32463927_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUSG00000022791.20_1	chr16	+	4249	15	FSM	ENSMUSG00000022791.20	ENSMUST00000238856.2	4267	15	12	6	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTACTCTCGCGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	32480081	32502305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32480394_32482556_32482738_32484703_32484775_32487038_32487261_32488204_32488358_32488770_32489049_32489609_32489737_32490112_32490260_32490356_32490452_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUSG00000022791.20_2	chr16	+	2776	7	FSM	ENSMUSG00000022791.20	ENSMUST00000115120.9	2796	7	14	6	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTACTCTCGCGTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	32491985	32502305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32492099_32494339_32494535_32496711_32496804_32498276_32499626_32499717_32499814_32499969_32500098_32501502
ENSMUSG00000022792.17_0	chr16	+	1560	5	FSM	ENSMUSG00000022792.17	ENSMUST00000059955.15	1574	5	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGAACAATCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	16120855	16127504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16121612_16122399_16122568_16124326_16124483_16125073_16125245_16127195
ENSMUSG00000022793.18_0	chr16	+	2288	7	FSM	ENSMUSG00000022793.18	ENSMUST00000023482.13	2304	7	12	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAATGTACTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38562637	38589407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38562731_38572363_38572762_38574280_38574514_38578040_38578229_38583430_38583554_38586276_38586382_38588259
ENSMUSG00000022793.18_3	chr16	+	1808	7	FSM	ENSMUSG00000022793.18	ENST00000483209.5	1830	7	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAAACTTCCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38572487	38589196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38572762_38574280_38574520_38578048_38578229_38583430_38583554_38586276_38586382_38588259_38589006_38589055
ENSMUSG00000022797.17_0	chr16	+	4867	19	FSM	ENSMUSG00000022797.17	ENSMUST00000023486.15	4890	19	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATACTGACTTGTCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	32427750	32451602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32427855_32431985_32432045_32433383_32433586_32434010_32434213_32435566_32435717_32435914_32436018_32437035_32437150_32437450_32437550_32437854_32437995_32439183_32439342_32439992_32440116_32441874_32441961_32442189_32442254_32443186_32443255_32443585_32443645_32443801_32443884_32445366_32445589_32447293_32447435_32448911
ENSMUSG00000022799.5_0	chr16	-	7939	12	FSM	ENSMUSG00000022799.5	ENSMUST00000023487.5	7964	12	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGATACCCTTGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	38533619	38418709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38424178_38426963_38427242_38429264_38429814_38431118_38431182_38438504_38438630_38441264_38441455_38444173_38444317_38444908_38445017_38445912_38445996_38457258_38457404_38460608_38460712_38532935
ENSMUSG00000022800.15_0	chr16	+	4300	9	FSM	ENSMUSG00000022800.15	ENSMUST00000023489.11	4312	9	12	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAGAATTCCATATAT	NA	NA	NA	NA	NA	NA	NA	NA	32698162	32729245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718743_32718841_32719247_32719310_32721002_32721078_32722788_32722916_32725901
ENSMUSG00000022800.15_8	chr16	+	1775	8	FSM	ENSMUSG00000022800.15	ENSMUST00000171325.9	1792	8	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAGTGTCTGTAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	32698175	32726835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32698367_32704493_32704623_32711634_32711784_32715454_32715568_32718770_32718841_32719247_32719310_32722788_32722916_32725901
ENSMUSG00000022801.14_0	chr16	+	5523	21	FSM	ENSMUSG00000022801.14	ENSMUST00000023491.13	5536	21	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAAAGCATGGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32734474	32836009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ENSMUSG00000022801.14_3	chr16	+	2892	20	FSM	ENSMUSG00000022801.14	ENSMUST00000170201.8	2902	20	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCCCTAGGTTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	32734493	32833505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32817751_32817859_32818873_32819012_32826033_32826112_32832710
ENSMUSG00000022801.14_5	chr16	+	2785	22	FSM	ENSMUSG00000022801.14	ENSMUST00000135193.9	2794	22	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGACACAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	32734513	32833062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32734774_32770661_32770807_32772426_32772554_32775669_32775776_32779764_32779902_32782004_32782115_32794249_32794344_32796098_32796220_32799765_32799915_32802197_32802275_32806345_32806398_32807108_32807259_32808800_32808852_32810634_32810689_32814131_32814204_32815317_32815367_32816175_32816284_32817751_32817859_32818873_32819012_32826033_32826112_32829558_32829807_32832710
ENSMUSG00000022802.3_1	chr16	+	490	5	FSM	ENSMUSG00000022802.3	ENST00000448030.1	509	5	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGGGTAAGACGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	32901311	32911725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32901407_32903388_32903484_32908471_32908594_32909634_32909743_32911655
ENSMUSG00000022803.13_0	chr16	+	2154	4	FSM	ENSMUSG00000022803.13	ENSMUST00000023494.13	2169	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCCAATTGTTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	38182576	38198569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38183510_38189845_38189955_38194180_38194740_38198016
ENSMUSG00000022807.10_0	chr16	+	4503	13	FSM	ENSMUSG00000022807.10	ENSMUST00000039733.10	4521	13	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACCAGCAGTGTTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	33005447	33063671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33006371_33016443_33016513_33025041_33025218_33026292_33026373_33030295_33030473_33034711_33034914_33037083_33037230_33044909_33045051_33047226_33047726_33049331_33049519_33054792_33054976_33056624_33056779_33062105
ENSMUSG00000022808.6_0	chr16	+	3147	14	FSM	ENSMUSG00000022808.6	ENSMUST00000023502.6	3161	14	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACAGAATGTGATAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	33071823	33120635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33071972_33084628_33084751_33087119_33087256_33088387_33088538_33090025_33090074_33097311_33097368_33101002_33101076_33104779_33104842_33106356_33106423_33108061_33108152_33110468_33110569_33112110_33112257_33115010_33115126_33118800
ENSMUSG00000022809.5_0	chr16	-	1736	9	FSM	ENSMUSG00000022809.5	ENST00000466380.6	1748	9	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGACTGCAGCTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	38115298	38069502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38069752_38071134_38071241_38071489_38071607_38071755_38071899_38073189_38073354_38074101_38074290_38074610_38074745_38086275_38086492_38114879
ENSMUSG00000022811.18_0	chr16	+	9814	9	FSM	ENSMUSG00000022811.18	ENSMUST00000165418.9	9830	9	12	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCCTTAAAGCTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	33201217	33324729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33201398_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_10	chr16	+	2927	8	FSM	ENSMUSG00000022811.18	ENST00000492394.5	2944	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACACCAAGATAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33201257	33317964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33201398_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_15	chr16	+	4022	9	FSM	ENSMUSG00000022811.18	ENSMUST00000089677.7	4032	9	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTTATACCACGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	33220819	33319008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33220929_33241690_33241773_33247563_33247700_33254995_33255345_33277245_33277372_33287224_33287349_33288469_33288554_33315714_33315834_33316115
ENSMUSG00000022811.18_3	chr16	+	982	5	FSM	ENSMUSG00000022811.18	ENST00000468369.5	1008	5	8	18	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAGATAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	33201228	33317966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33201398_33241690_33241777_33288422_33288554_33315714_33315745_33317400
ENSMUSG00000022812.15_0	chr16	+	8288	11	FSM	ENSMUSG00000022812.15	ENSMUST00000023507.13	8303	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAGTGTGGTCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	37909372	38066441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38049039_38049139_38060863
ENSMUSG00000022812.15_7	chr16	+	1703	10	FSM	ENSMUSG00000022812.15	ENST00000650344.2	1731	10	7	21	7	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATTAAAAAGAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37910427	38061010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37910976_37964621_37964816_37991025_37991110_38004796_38004908_38008172_38008304_38011889_38011997_38014258_38014357_38028356_38028453_38040333_38040521_38060863
ENSMUSG00000022814.7_0	chr16	-	3459	6	FSM	ENSMUSG00000022814.7	ENSMUST00000023510.7	3484	6	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAACATCCTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	33787395	33775163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33777306_33779422_33779538_33780546_33780723_33781938_33782611_33784141_33784296_33787195
ENSMUSG00000022816.12_0	chr16	+	3758	11	FSM	ENSMUSG00000022816.12	ENSMUST00000114763.3	3789	11	10	21	10	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	8771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAATAAAAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	37597244	37656855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37597515_37597655_37597713_37636067_37636173_37639265_37639396_37641517_37641551_37642962_37643094_37647087_37647207_37649068_37649182_37649475_37649587_37651918_37651996_37654243
ENSMUSG00000022817.16_0	chr16	+	3257	15	FSM	ENSMUSG00000022817.16	ENSMUST00000115028.11	3282	15	14	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAAACCAAGCAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33650048	33769697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33650401_33665355_33665442_33685817_33686023_33696171_33696422_33705322_33705492_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ENSMUSG00000022817.16_4	chr16	+	2120	11	FSM	ENSMUSG00000022817.16	ENSMUST00000232262.2	2130	11	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTGATTACTGGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33712319	33769522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33712420_33719610_33719773_33720879_33720976_33723163_33723254_33730834_33730970_33740154_33740585_33760859_33761083_33764473_33764575_33766860_33766981_33768084_33768252_33769026
ENSMUSG00000022820.5_0	chr16	-	958	3	FSM	ENSMUSG00000022820.5	ENSMUST00000023514.4	971	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCCAAGCTGGAACGGG	NA	NA	NA	NA	NA	NA	NA	NA	37474806	37467535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_37468082_37469375_37469523_37474541
ENSMUSG00000022822.17_0	chr16	-	5791	30	FSM	ENSMUSG00000022822.17	ENSMUST00000079158.13	5811	30	11	9	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAAAGCTCTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20245133	20150061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20151456_20152335_20152501_20153855_20153970_20157625_20157705_20163384_20163545_20176118_20176309_20180931_20181022_20182724_20182912_20184354_20184484_20184562_20184717_20186791_20186922_20187173_20187321_20187775_20187961_20190869_20190970_20193740_20193885_20195260_20195465_20197196_20197270_20197391_20197517_20208118_20208191_20211200_20211558_20214764_20214873_20215729_20215879_20217562_20217711_20218224_20218399_20218555_20218790_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUSG00000022822.17_6	chr16	-	1656	5	FSM	ENSMUSG00000022822.17	ENST00000382494.6	1662	5	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20224630	20219511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20220635_20221009_20221085_20223315_20223464_20224138_20224295_20224476
ENSMUSG00000022822.17_7	chr16	-	1133	7	FSM	ENSMUSG00000022822.17	ENSMUST00000096199.5	1136	7	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGGTATTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	20245102	20219511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20219822_20221009_20221085_20223315_20223464_20224138_20224295_20224476_20224635_20241054_20241236_20244997
ENSMUSG00000022827.15_0	chr16	+	2018	8	FSM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATACACAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37360250	37392738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37360323_37362208_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUSG00000022827.15_3	chr16	+	1948	7	ISM	ENSMUSG00000022827.15	ENSMUST00000023524.13	2031	8	1960	9	1960	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATACACAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37362206	37392738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_37362301_37377182_37377313_37380356_37380472_37383977_37384129_37387681_37387754_37390749_37390789_37391391
ENSMUSG00000022828.11_0	chr16	-	3057	5	FSM	ENSMUSG00000022828.11	ENSMUST00000023525.9	3084	5	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGACTAAAGAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	37360136	37330163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_37332182_37336080_37336323_37343112_37343315_37356082_37356556_37360014
ENSMUSG00000022829.15_0	chr16	-	2983	23	FSM	ENSMUSG00000022829.15	ENST00000497029.5	3000	23	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGGTCAAATGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37204060	36954491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_36954896_36960205_36960446_36977113_36977207_36994658_36994725_37007012_37007085_37008930_37009083_37020937_37021064_37024767_37024941_37028405_37028624_37030531_37030573_37035211_37035280_37036284_37036433_37056591_37056665_37061700_37061856_37068231_37068311_37076170_37076295_37082245_37082330_37108648_37108713_37111290_37111426_37143889_37143991_37150237_37150320_37165432_37165531_37203873
ENSMUSG00000022832.12_0	chr16	+	828	6	FSM	ENSMUSG00000022832.12	ENST00000251776.8	843	6	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	5227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTAATAAACAATTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	34470319	34498957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34470392_34487053_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ENSMUSG00000022832.12_10	chr16	+	756	5	ISM	ENSMUSG00000022832.12	ENSMUST00000023530.5	875	6	15494	33	15494	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACTAATAAACAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	34487051	34498955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ENSMUSG00000022832.12_3	chr16	+	868	6	FSM	ENSMUSG00000022832.12	ENST00000514116.6	886	6	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACTAATAAACAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	34470320	34498955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34470392_34487010_34487182_34490266_34490385_34491470_34491633_34497505_34497682_34498785
ENSMUSG00000022833.8_0	chr16	+	4062	13	FSM	ENSMUSG00000022833.8	ENSMUST00000023532.7	4107	13	41	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATACGTGAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34511026	34545560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34517636_34517757_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_16	chr16	+	2718	11	FSM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGCAAGTACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	34515958	34544509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34516014_34517182_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_26	chr16	+	2655	10	ISM	ENSMUSG00000022833.8	ENST00000310351.8	2723	11	1233	4	1233	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGCAAGTACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	34517190	34544509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022833.8_5	chr16	+	2888	12	FSM	ENSMUSG00000022833.8	ENST00000488653.6	2901	12	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGCAAGTACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	34511029	34544509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34511202_34515960_34516014_34517182_34517256_34517475_34517546_34525198_34525418_34525530_34525626_34526756_34527268_34529893_34530036_34535707_34535779_34541808_34542028_34542106_34542240_34543379
ENSMUSG00000022836.12_0	chr16	+	7805	32	FSM	ENSMUSG00000022836.12	ENSMUST00000023538.9	7824	32	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACAGTGCATGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34605298	34822779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34605398_34635804_34635973_34680933_34681142_34693558_34693608_34694391_34694543_34695866_34696033_34698287_34698307_34699423_34699939_34700460_34700668_34715180_34715316_34719730_34719884_34732516_34732655_34734333_34734532_34735152_34735403_34741421_34741494_34741942_34743031_34750203_34750321_34759295_34759383_34773148_34773200_34773948_34774077_34776752_34776907_34783913_34784217_34791611_34791645_34791743_34791838_34792188_34792393_34797254_34797473_34799541_34799666_34806810_34806964_34809251_34809376_34815443_34815574_34817094_34817227_34820642
ENSMUSG00000022837.15_0	chr16	+	2789	14	FSM	ENSMUSG00000022837.15	ENSMUST00000114819.8	2797	14	0	8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36648768	36693075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36648802_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812
ENSMUSG00000022837.15_1	chr16	+	2254	15	FSM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36648772	36693075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36648855_36649365_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUSG00000022837.15_3	chr16	+	2758	13	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	594	0	594	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36649363	36693075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812
ENSMUSG00000022837.15_4	chr16	+	2174	14	ISM	ENSMUSG00000022837.15	ENSMUST00000023535.4	2257	15	594	0	594	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTTGTCATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	36649363	36693075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_36649436_36651863_36651977_36652190_36652354_36655877_36656008_36660231_36660326_36663720_36663821_36667842_36668022_36669988_36670099_36671546_36671657_36676652_36676796_36678816_36678966_36687920_36688053_36691812_36691970_36692553
ENSMUSG00000022841.16_0	chr16	+	2899	11	FSM	ENSMUSG00000022841.16	ENSMUST00000090023.13	2080	11	12	-831	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	7190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATACATAAAACAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	20354239	20363637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20354352_20356367_20356485_20358057_20358324_20359082_20359166_20359724_20359861_20359959_20360102_20360496_20360617_20360705_20360842_20360946_20361045_20361388_20361501_20362060
ENSMUSG00000022842.19_1	chr16	+	3122	19	FSM	ENSMUSG00000022842.19	ENSMUST00000003898.12	3152	19	21	9	-2	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATATCAGCCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	20448598	20464656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022842.19_5	chr16	+	2482	19	FSM	ENSMUSG00000022842.19	ENSMUST00000122306.8	2495	19	13	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCCAGCTATTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	20448607	20465226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20448798_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20465010
ENSMUSG00000022842.19_7	chr16	+	3034	18	FSM	ENSMUSG00000022842.19	ENSMUST00000133344.8	3042	18	3	5	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCAGCCAGCCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	20448603	20464660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20448798_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000022843.18_0	chr16	-	3110	24	FSM	ENSMUSG00000022843.18	ENSMUST00000007207.15	3128	24	10	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAACACTTGTGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	20534857	20521721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20522188_20522304_20522392_20525923_20526029_20526168_20526208_20526322_20526383_20526592_20526667_20526826_20526942_20527043_20527217_20527383_20527518_20527851_20528066_20528319_20528431_20528629_20528700_20529021_20529178_20529304_20529390_20530439_20530542_20530641_20530727_20530806_20530933_20531061_20531141_20531221_20531300_20531403_20531538_20531629_20531759_20532077_20532210_20532362_20532520_20534658
ENSMUSG00000022844.9_0	chr16	-	1790	17	FSM	ENSMUSG00000022844.9	ENSMUST00000023550.9	1809	17	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTATTCAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	35311234	35217691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35217909_35218646_35218782_35224382_35224454_35228003_35228135_35230663_35230825_35231296_35231368_35243235_35243373_35250102_35250175_35250262_35250355_35258482_35258551_35269772_35269834_35273820_35273914_35276465_35276512_35276831_35276916_35284704_35284793_35286900_35287028_35311098
ENSMUSG00000022847.16_0	chr16	-	2412	6	FSM	ENSMUSG00000022847.16	ENSMUST00000115437.4	2416	6	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCCGAGTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	20553259	20543205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20544833_20545055_20545224_20547131_20547219_20547468_20547597_20547813_20547968_20553011
ENSMUSG00000022847.16_2	chr16	-	888	4	FSM	ENSMUSG00000022847.16	ENST00000650229.1	896	4	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTCCACCACCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20547529	20544243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20544816_20545055_20545224_20547131_20547219_20547468
ENSMUSG00000022847.16_3	chr16	-	825	3	ISM	ENSMUSG00000022847.16	ENST00000650229.1	896	4	320	1	320	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTCCACCACCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	20547216	20544243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_20544816_20545055_20545224_20547131
ENSMUSG00000022848.9_0	chr16	-	5384	9	FSM	ENSMUSG00000022848.9	ENSMUST00000023554.9	5395	9	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCAGTTAATGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35589722	35514438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35518391_35525123_35525307_35539681_35539810_35543122_35543191_35550655_35550765_35554306_35554437_35555755_35556022_35570865_35570960_35589268
ENSMUSG00000022849.6_0	chr16	+	1691	8	FSM	ENSMUSG00000022849.6	ENSMUST00000231579.2	1703	8	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACCTCCAGCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	35590751	35645913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35590910_35607559_35607746_35621906_35622089_35634287_35634425_35637521_35637694_35639048_35639133_35645058_35645170_35645252
ENSMUSG00000022855.10_0	chr16	+	4489	17	FSM	ENSMUSG00000022855.10	ENSMUST00000023561.8	4499	17	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGAGTGCTTTATGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	21828242	21868018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21828493_21830243_21830303_21832873_21833008_21834948_21835016_21837086_21837178_21842389_21842559_21845388_21845490_21846718_21846814_21847290_21847343_21850853_21850915_21855219_21855397_21857286_21857419_21859189_21859394_21860071_21860152_21861719_21861805_21862962_21863059_21865382
ENSMUSG00000022856.10_0	chr16	-	1347	5	FSM	ENSMUSG00000022856.10	ENSMUST00000023562.9	1360	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGCCTTGCAGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21766295	21753081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21753796_21755730_21755870_21756682_21756845_21764750_21764905_21766117
ENSMUSG00000022857.14_0	chr16	-	2919	24	FSM	ENSMUSG00000022857.14	ENST00000284885.8	2932	24	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCCTGACCCAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	78884771	78750685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_78750844_78754197_78754338_78757427_78757524_78758901_78759084_78764825_78765013_78765154_78765205_78769067_78769164_78782762_78782896_78784531_78784643_78798624_78798766_78800211_78800338_78803017_78803108_78818274_78818411_78821176_78821328_78821641_78821748_78831092_78831243_78831998_78832140_78850921_78851029_78854498_78854608_78859024_78859157_78870064_78870101_78875836_78875989_78884336_78884405_78884650
ENSMUSG00000022858.17_0	chr16	-	3387	9	FSM	ENSMUSG00000022858.17	ENSMUST00000161286.8	3403	9	8	8	2	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTATAAGTACATAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	22084747	22063306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22065617_22065939_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22073733_22073868_22084490
ENSMUSG00000022858.17_10	chr16	-	937	7	FSM	ENSMUSG00000022858.17	ENST00000382191.4	947	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTACCTTGATGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22084739	22065937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22066014_22067185_22067246_22067799_22067884_22069614_22069731_22071356_22071546_22073157_22073321_22084490
ENSMUSG00000022861.18_0	chr16	-	3240	23	ISM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	34560	27	34560	-17	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAGAAACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	22441181	22287227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_22288098_22298115_22298177_22300650_22300772_22318973_22319152_22338294_22338386_22367401_22367467_22375075_22375237_22376766_22376857_22381447_22381534_22385164_22385245_22388912_22388973_22390420_22390514_22391349_22391467_22394061_22394151_22395436_22395555_22398492_22398616_22399272_22399348_22403184_22403235_22407048_22407220_22418583_22418638_22419181_22419355_22429528_22429606_22440944
ENSMUSG00000022861.18_1	chr16	-	3288	24	FSM	ENSMUSG00000022861.18	ENST00000344484.8	3315	24	0	27	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAAAGAAACAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	22475741	22287227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22288098_22298115_22298177_22300650_22300772_22318973_22319152_22338294_22338386_22367401_22367467_22375075_22375237_22376766_22376857_22381447_22381534_22385164_22385245_22388912_22388973_22390420_22390514_22391349_22391467_22394061_22394151_22395436_22395555_22398492_22398616_22399272_22399348_22403184_22403235_22407048_22407220_22418583_22418638_22419181_22419355_22429528_22429606_22440944_22441187_22475698
ENSMUSG00000022863.16_0	chr16	-	1395	5	FSM	ENSMUSG00000022863.16	ENSMUST00000023570.14	1414	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAATGTGTGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78173686	78156754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_78157427_78161689_78161898_78166000_78166139_78170132_78170312_78173488
ENSMUSG00000022864.15_0	chr16	-	6099	5	FSM	ENSMUSG00000022864.15	ENSMUST00000232052.2	6127	5	23	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATCTCCGAGCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	78373522	78337230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373078
ENSMUSG00000022864.15_1	chr16	-	1547	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114219.8	1576	5	23	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGAGAATTGCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	78373522	78341582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373278
ENSMUSG00000022864.15_2	chr16	-	1253	5	FSM	ENSMUSG00000022864.15	ENSMUST00000114218.2	1271	5	10	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTCTAGTCCAGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	78373535	78341856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_78342173_78343393_78343457_78344463_78344980_78372808_78372943_78373311
ENSMUSG00000022865.15_0	chr16	+	549	3	FSM	ENSMUSG00000022865.15	ENST00000400165.5	561	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTAGCTGCCCCTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	78122048	78133256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_78122212_78125841_78126047_78133075
ENSMUSG00000022865.15_1	chr16	+	867	4	FSM	ENSMUSG00000022865.15	ENST00000400166.5	877	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTAGCCCATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	78122052	78133422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_78122212_78125841_78126047_78130249_78130406_78133075
ENSMUSG00000022867.12_15	chr16	+	4763	25	FSM	ENSMUSG00000022867.12	ENST00000285681.6	4772	25	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGCTTCTTGTAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	76810712	76913678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76859283_76859361_76865940_76866015_76868531_76868681_76871746_76871875_76872158_76872255_76873247_76873410_76873891_76874122_76877211_76877283_76878344_76878574_76880636_76880838_76890490_76890631_76896538_76896635_76904772_76904952_76906061_76906141_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUSG00000022867.12_7	chr16	+	2039	11	FSM	ENSMUSG00000022867.12	ENST00000351097.9	2051	11	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAGTGTTTGTAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76810710	76912863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_76811029_76830790_76830869_76834235_76834381_76845329_76845454_76847285_76847449_76852041_76852129_76856050_76856189_76907953_76908034_76910620_76910745_76911771_76911968_76912277
ENSMUSG00000022871.14_0	chr16	+	1541	8	FSM	ENSMUSG00000022871.14	ENSMUST00000023587.12	1544	8	2	1	2	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTTGGCTTCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	22738988	22758501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22739246_22747824_22748060_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUSG00000022871.14_3	chr16	+	1093	7	FSM	ENSMUSG00000022871.14	ENSMUST00000116625.10	1094	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTTGGCTTCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	22739201	22758501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22739246_22748382_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUSG00000022871.14_4	chr16	+	1044	6	ISM	ENSMUSG00000022871.14	ENSMUST00000167399.2	1421	8	7893	6	7893	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCTTGGCTTCAACCT	NA	NA	NA	NA	NA	NA	NA	NA	22748387	22758501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_22748494_22750999_22751088_22752982_22753147_22754391_22754491_22756596_22756708_22758025
ENSMUSG00000022876.19_0	chr16	-	1276	7	FSM	ENSMUSG00000022876.19	ENST00000285670.7	1286	7	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAGAAAAAAAAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	75685698	75656116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680760_75680915_75685627
ENSMUSG00000022876.19_2	chr16	-	1202	6	ISM	ENSMUSG00000022876.19	ENST00000285670.7	1286	7	4789	8	4789	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAGAAAAAAAAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	75680911	75656116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680760
ENSMUSG00000022876.19_3	chr16	-	1378	8	FSM	ENSMUSG00000022876.19	ENST00000400566.6	1396	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAGAAAAAAAAGACATGA	NA	NA	NA	NA	NA	NA	NA	NA	75706118	75656116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_75656528_75667655_75667807_75670333_75670541_75673313_75673466_75675984_75676115_75680760_75680915_75685627_75685700_75706017
ENSMUSG00000022881.16_0	chr16	-	1220	11	FSM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	0	8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	22946487	22932700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149_22946292_22946434
ENSMUSG00000022881.16_1	chr16	-	1159	10	ISM	ENSMUSG00000022881.16	ENSMUST00000023598.15	1228	11	204	8	184	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGTGAATATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	22946283	22932700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_22932858_22932936_22933054_22933194_22933276_22933356_22933483_22934124_22934246_22934464_22934609_22936693_22936814_22939658_22939739_22943285_22943365_22946149
ENSMUSG00000022883.12_0	chr16	+	7541	29	FSM	ENSMUSG00000022883.12	ENSMUST00000023600.8	7563	29	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCATCCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72460051	72842976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775680_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ENSMUSG00000022883.12_2	chr16	+	7525	29	NNC	ENSMUSG00000022883.12	novel	7563	29	NA	NA	30	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATCATCCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72460066	72842976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_+_72461083_72539013_72539341_72701517_72701676_72730100_72730222_72730561_72730701_72732546_72732675_72756968_72757094_72759041_72759214_72767054_72767261_72768867_72768950_72769095_72769265_72769358_72769526_72774573_72774696_72775447_72775679_72776732_72776855_72780596_72780769_72786486_72786685_72790554_72790582_72792004_72792048_72798806_72798962_72801297_72801634_72803711_72803820_72806499_72806645_72809762_72810012_72821019_72821427_72824644_72824798_72832546_72832856_72839878_72840076_72841235
ENSMUSG00000022884.17_0	chr16	+	2193	11	FSM	ENSMUSG00000022884.17	ENSMUST00000023599.13	2208	11	9	6	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATAGGTGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22926202	22932691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUSG00000022884.17_10	chr16	+	2703	11	FSM	ENSMUSG00000022884.17	ENSMUST00000077605.12	2708	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATAGGTGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22926508	22932691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22927869_22928010_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931100
ENSMUSG00000022884.17_15	chr16	+	940	3	FSM	ENSMUSG00000022884.17	ENST00000471496.5	954	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCACATGTCTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	22929329	22932640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22929474_22930270_22930343_22931916
ENSMUSG00000022884.17_7	chr16	+	2187	10	FSM	ENSMUSG00000022884.17	ENSMUST00000168891.8	2203	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAGGAAATAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	22926236	22932859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_22926571_22927337_22927384_22927468_22927602_22928734_22928904_22928983_22929094_22929329_22929474_22929875_22930014_22930252_22930343_22930566_22930647_22931916
ENSMUSG00000022885.17_0	chr16	+	4491	8	FSM	ENSMUSG00000022885.17	ENSMUST00000023601.14	4506	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGCTGCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	23043499	23179093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23043980_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUSG00000022885.17_1	chr16	+	4140	8	FSM	ENSMUSG00000022885.17	ENSMUST00000178797.8	4177	8	30	7	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATCTGCTGCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	23044800	23179093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23044930_23075708_23075852_23136313_23136449_23139782_23140429_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUSG00000022885.17_2	chr16	+	1070	5	FSM	ENSMUSG00000022885.17	ENST00000457772.6	1091	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTAACAAAGGAGCACCT	NA	NA	NA	NA	NA	NA	NA	NA	23136321	23176949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23136449_23147091_23147190_23173615_23173715_23174958_23175134_23176378
ENSMUSG00000022887.10_0	chr16	-	5330	16	FSM	ENSMUSG00000022887.10	ENSMUST00000089883.7	5345	16	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAAAGAGCTCTGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23339558	23268174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_23271323_23271625_23271726_23273612_23273681_23276747_23276934_23278377_23278492_23283777_23283916_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23304351_23304500_23310671_23310869_23313371_23313504_23314829_23315008_23332581_23332829_23339295
ENSMUSG00000022887.10_2	chr16	-	3771	11	FSM	ENSMUSG00000022887.10	ENSMUST00000229619.2	3786	11	6	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCAACAACCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	23339394	23287121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23304351_23304500_23310671_23310869_23313371_23313504_23314829_23315008_23332581_23332829_23339295
ENSMUSG00000022887.10_6	chr16	-	2116	10	FSM	ENSMUSG00000022887.10	ENST00000392472.6	2133	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGATGAACTCCCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	23339511	23288646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_23289481_23293623_23293699_23295016_23295155_23302144_23302224_23303100_23303220_23304351_23304500_23310671_23310869_23313371_23313504_23314829_23315008_23339295
ENSMUSG00000022889.8_0	chr16	-	2277	10	FSM	ENSMUSG00000022889.8	ENSMUST00000116584.2	2294	10	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACCGAAATTCACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	84532623	84514473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84515273_84517157_84517206_84520725_84520880_84522012_84522079_84524371_84524485_84527306_84527375_84527715_84527816_84529229_84529370_84531294_84531502_84532041
ENSMUSG00000022890.14_0	chr16	-	1098	4	FSM	ENSMUSG00000022890.14	ENST00000400093.3	1115	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTTTGGTGAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	84632492	84624745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84624884_84625312_84625438_84628216_84628389_84631829
ENSMUSG00000022890.14_5	chr16	-	791	5	FSM	ENSMUSG00000022890.14	ENSMUST00000023608.14	809	5	11	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTATCAAATGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84632502	84624765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84631696_84631872_84632308
ENSMUSG00000022890.14_6	chr16	-	733	6	FSM	ENSMUSG00000022890.14	ENSMUST00000114191.8	742	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTATCAAATGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84632389	84624765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84624884_84625312_84625438_84628216_84628396_84630707_84630763_84631696_84631872_84632308
ENSMUSG00000022892.12_0	chr16	-	8150	18	FSM	ENSMUSG00000022892.12	ENSMUST00000227723.2	8167	18	11	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACACTCCAGTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84970643	84746578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_13	chr16	-	3286	17	FSM	ENSMUSG00000022892.12	ENSMUST00000226801.2	3299	17	9	4	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGACGTTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	84970586	84751331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_16	chr16	-	3154	16	FSM	ENSMUSG00000022892.12	ENSMUST00000005406.12	3176	16	10	12	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAACTCCAGGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	84970636	84751342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_2	chr16	-	2944	15	FSM	ENSMUSG00000022892.12	ENST00000354192.7	2959	15	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGATTGTGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84970565	84751313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84970389
ENSMUSG00000022892.12_20	chr16	-	2357	17	FSM	ENSMUSG00000022892.12	ENST00000358918.7	2367	17	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGGTGTTCATTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84970483	84752155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840465_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_21	chr16	-	3235	16	FSM	ENSMUSG00000022892.12	ENSMUST00000227021.2	3264	16	11	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATTAAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	84970616	84751355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84840463_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022892.12_3	chr16	-	3353	18	FSM	ENSMUSG00000022892.12	ENST00000346798.8	3373	18	12	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGTGATTGTGTGGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	84970583	84751313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_84752321_84759609_84759757_84762557_84762659_84768295_84768350_84774951_84775174_84810514_84810615_84812119_84812249_84821740_84821900_84822310_84822386_84827119_84827254_84837138_84837196_84840465_84840632_84853211_84853415_84876727_84876922_84879663_84879777_84900093_84900224_84917417_84917586_84970389
ENSMUSG00000022893.15_0	chr16	-	4859	9	FSM	ENSMUSG00000022893.15	ENSMUST00000023610.15	4884	9	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTACAAAAACAAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	85599991	85590729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_85592989_85593526_85593703_85594605_85594782_85594891_85595079_85595297_85595585_85595933_85596102_85596423_85596557_85596977_85597325_85598865
ENSMUSG00000022894.7_0	chr16	-	10759	8	FSM	ENSMUSG00000022894.7	ENSMUST00000023611.7	10791	8	13	19	13	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAGAAATTAAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	85698703	85653079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_85660066_85663507_85663684_85664913_85665090_85665426_85665611_85666801_85667086_85674757_85674926_85684704_85684838_85696051
ENSMUSG00000022895.17_0	chr16	+	3872	10	FSM	ENSMUSG00000022895.17	ENSMUST00000023612.17	3890	10	9	9	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAATGCCTCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	95502950	95522086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95503512_95507287_95507360_95510815_95510928_95512699_95512820_95513129_95513331_95515380_95515465_95516010_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022895.17_8	chr16	+	3082	8	FSM	ENSMUSG00000022895.17	ENST00000653642.1	3094	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTAACCTGAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95510823	95521935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95510928_95512699_95512820_95513129_95513331_95515380_95515474_95516017_95516230_95517077_95517342_95518891_95519011_95519966
ENSMUSG00000022897.16_0	chr16	+	6076	12	FSM	ENSMUSG00000022897.16	ENST00000647188.2	6086	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGTGATTATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	94370548	94495950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464627_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUSG00000022897.16_14	chr16	+	5737	12	FSM	ENSMUSG00000022897.16	ENSMUST00000119878.8	5759	12	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATAATTTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	94370881	94495917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94371394_94412277_94412364_94460355_94460553_94464600_94464721_94466774_94466964_94469663_94469812_94472161_94472449_94474195_94474343_94478310_94478452_94485893_94486201_94487337_94487463_94492439
ENSMUSG00000022898.14_0	chr16	-	2532	8	FSM	ENSMUSG00000022898.14	ENSMUST00000023615.7	2547	8	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTTGGACTGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	94327676	94298643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_94299942_94302393_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022898.14_6	chr16	-	699	6	FSM	ENSMUSG00000022898.14	ENST00000398998.1	712	6	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGGTAAGCAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94327292	94302400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94306222_94306304_94311596_94311747_94327196
ENSMUSG00000022898.14_7	chr16	-	761	6	FSM	ENSMUSG00000022898.14	ENST00000476950.5	775	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGGGTAAGCAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94327291	94302400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_94302547_94302940_94303092_94305160_94305236_94311596_94311747_94313088_94313233_94327196
ENSMUSG00000022899.11_0	chr16	-	2903	21	FSM	ENSMUSG00000022899.11	ENST00000489711.6	2927	21	12	12	2	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAGTAAGGAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	36605180	36571482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_36572317_36572633_36572739_36573354_36573502_36574057_36574155_36574803_36574915_36576411_36576459_36576586_36576752_36577483_36577619_36578141_36578224_36579587_36579677_36580432_36580484_36581901_36582016_36582184_36582272_36582666_36582750_36592425_36592504_36592783_36592875_36594903_36595004_36595959_36596053_36601927_36602070_36602633_36602722_36605016
ENSMUSG00000022900.15_0	chr16	+	1325	6	FSM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCATACTGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36514548	36545925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36514577_36528611_36528783_36529840_36529991_36541899_36542032_36542244_36543042_36545878
ENSMUSG00000022900.15_2	chr16	+	1289	5	ISM	ENSMUSG00000022900.15	ENST00000393631.5	1331	6	14071	6	14071	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACCATACTGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36528619	36545925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_36528783_36529840_36529991_36541899_36542032_36542244_36543042_36545878
ENSMUSG00000022901.14_0	chr16	-	713	4	FSM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGGAGTCAATGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	36462989	36438733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_36438989_36441065_36441402_36449331_36449382_36462917
ENSMUSG00000022901.14_1	chr16	-	640	3	ISM	ENSMUSG00000022901.14	ENST00000393627.6	720	4	13612	4	13612	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGGAGTCAATGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	36449380	36438733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_36438989_36441065_36441402_36449331
ENSMUSG00000022905.13_0	chr16	+	5022	14	FSM	ENSMUSG00000022905.13	ENSMUST00000004054.13	5039	14	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAAACAGGTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	35803697	35857497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35803879_35820551_35820686_35823212_35823321_35829685_35829786_35833262_35833358_35839627_35839760_35840525_35840615_35841057_35841158_35841854_35842019_35843544_35843624_35849891_35850018_35851539_35851668_35853621_35853801_35854090
ENSMUSG00000022906.16_0	chr16	+	3540	11	FSM	ENSMUSG00000022906.16	ENSMUST00000114878.8	3548	11	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGGCTGTGAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	35758842	35792970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35759431_35761402_35761506_35763738_35763773_35767870_35768725_35773932_35774149_35777176_35777396_35780373_35780432_35784344_35784735_35788019_35788157_35789960_35790136_35792204
ENSMUSG00000022911.12_0	chr16	-	3511	10	FSM	ENSMUSG00000022911.12	ENSMUST00000089289.6	3528	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATATACCATTTATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	62667394	62614055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_62616072_62622084_62622154_62623082_62623200_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ENSMUSG00000022911.12_13	chr16	-	1128	7	FSM	ENSMUSG00000022911.12	ENST00000486562.2	1140	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGGCCACGTAAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	62667136	62615783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_62616072_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62667047
ENSMUSG00000022911.12_14	chr16	-	1047	6	ISM	ENSMUSG00000022911.12	ENST00000486562.2	1140	7	33513	0	33513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGTAAGCAGTCATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	62633629	62615777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_62616072_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521
ENSMUSG00000022911.12_4	chr16	-	1831	11	FSM	ENSMUSG00000022911.12	ENST00000471138.5	1844	11	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGAGAGTGGTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	62667137	62615327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_62615814_62615957_62616072_62622084_62622154_62623082_62623193_62624199_62624426_62626904_62627011_62632211_62632415_62633521_62633628_62647526_62647777_62651105_62651177_62667047
ENSMUSG00000022912.9_0	chr16	+	3288	15	FSM	ENSMUSG00000022912.9	ENSMUST00000023629.9	3303	15	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATATGAGCAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	62674677	62749702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_62674868_62705763_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62746690_62746917_62748395
ENSMUSG00000022912.9_5	chr16	+	1741	13	FSM	ENSMUSG00000022912.9	ENST00000647936.1	1755	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGCTCACATTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	62705788	62748596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_62705922_62709343_62709369_62719238_62719326_62720688_62720812_62720915_62721048_62723854_62723981_62728024_62728147_62730360_62730477_62734160_62734351_62738437_62738606_62739875_62740045_62744878_62745028_62748395
ENSMUSG00000022913.17_0	chr16	-	1019	7	FSM	ENSMUSG00000022913.17	ENSMUST00000023630.16	1044	7	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAATTAATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	95792149	95781146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95781312_95783301_95783439_95784992_95785192_95788492_95788556_95789159_95789312_95790691_95790799_95791953
ENSMUSG00000022914.18_0	chr16	-	8539	42	FSM	ENSMUSG00000022914.18	ENSMUST00000099502.9	8547	42	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTGGTCTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	95883620	95793291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95795178_95803633_95804555_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ENSMUSG00000022914.18_15	chr16	-	9830	41	ISM	ENSMUSG00000022914.18	ENSMUST00000099502.9	8547	42	-12	7185	7	-6	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTATTTCCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	95883640	95800476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_95804555_95809919_95810769_95811019_95811188_95812909_95813137_95814908_95815076_95817307_95817461_95818780_95818925_95820618_95820661_95820878_95820955_95822415_95822542_95824602_95824724_95824920_95825077_95828544_95828607_95829376_95829489_95831834_95831918_95832726_95832852_95834784_95834893_95834967_95835094_95837061_95837252_95839090_95839186_95842451_95842584_95844200_95844295_95845663_95845848_95847544_95847734_95848134_95848361_95848518_95848648_95853724_95853860_95855031_95855183_95857314_95857414_95858662_95858704_95859882_95859984_95860781_95860853_95862198_95862300_95865949_95866172_95867224_95867386_95867695_95867795_95869676_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ENSMUSG00000022914.18_35	chr16	-	2358	5	FSM	ENSMUSG00000022914.18	ENSMUST00000113827.4	2382	5	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATATACGTAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	95883712	95867877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95869828_95883013_95883074_95883177_95883208_95883321_95883381_95883453
ENSMUSG00000022935.17_0	chr16	-	2682	16	FSM	ENSMUSG00000022935.17	ENST00000399907.5	2692	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCCTGCATCTATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87853054	87709555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_87709758_87711041_87711293_87719964_87720191_87732785_87733004_87737425_87737545_87743432_87743657_87744681_87744886_87746915_87747030_87752176_87752222_87754377_87754486_87792802_87792947_87803236_87803411_87806592_87806647_87831042_87831225_87848222_87848481_87852895
ENSMUSG00000022940.18_1	chr16	-	946	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113910.8	966	5	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCAACCTTGAGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	94171541	94165313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171224
ENSMUSG00000022940.18_2	chr16	-	729	5	FSM	ENSMUSG00000022940.18	ENSMUST00000113906.9	745	5	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTCAACCTTGAGTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	94171563	94165313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_94165647_94166213_94166333_94168419_94168493_94170947_94171052_94171463
ENSMUSG00000022945.13_0	chr16	+	1908	14	FSM	ENSMUSG00000022945.13	ENSMUST00000023666.11	1922	14	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGAAAAAGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93680791	93702992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93680864_93681353_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022945.13_11	chr16	+	1837	13	ISM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	541	-27	-31	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAGAAAAAGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	93681352	93702992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022945.13_15	chr16	+	1465	11	FSM	ENSMUSG00000022945.13	ENST00000404930.1	1484	11	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCCCCCCGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93681396	93698230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696932_93697074_93697812
ENSMUSG00000022945.13_6	chr16	+	1890	14	FSM	ENSMUSG00000022945.13	ENSMUST00000117099.8	1894	14	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGGCCAAATAAACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	93680811	93702961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93680864_93681320_93681510_93682246_93682380_93684009_93684128_93684929_93685034_93688387_93688485_93689001_93689087_93689619_93689714_93691624_93691695_93691782_93691875_93696910_93697074_93697812_93698245_93701893_93701986_93702792
ENSMUSG00000022946.11_0	chr16	+	7286	37	FSM	ENSMUSG00000022946.11	ENSMUST00000045004.11	7319	37	22	11	22	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAACCACACGTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	93508813	93607465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93508957_93513037_93513201_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595793_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ENSMUSG00000022946.11_1	chr16	+	7312	36	FSM	ENSMUSG00000022946.11	ENSMUST00000227156.2	7340	36	19	9	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACACGTAATTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	93527005	93607469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93527331_93536041_93536224_93536856_93537028_93544351_93544542_93546011_93546111_93546777_93546902_93549011_93549122_93549722_93549838_93552337_93552459_93553963_93554084_93556514_93556618_93557179_93557372_93558920_93559600_93560045_93560318_93560779_93560933_93562325_93562427_93563013_93563205_93566281_93567915_93568633_93568746_93570808_93570998_93573774_93573898_93574246_93574382_93577644_93577701_93579088_93579194_93579299_93579367_93589974_93590120_93595790_93595874_93596794_93596905_93596988_93597136_93598448_93598511_93600349_93600479_93603222_93603360_93604100_93604154_93604705_93604868_93606179_93606310_93606983
ENSMUSG00000022947.9_1	chr16	+	1149	3	FSM	ENSMUSG00000022947.9	ENSMUST00000039620.7	1170	3	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTATTTGGTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	93480119	93487874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93480502_93481934_93482043_93487215
ENSMUSG00000022947.9_5	chr16	+	848	3	FSM	ENSMUSG00000022947.9	ENST00000290354.6	858	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAAACGTTAGCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	93480221	93487671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93480506_93481934_93482043_93487215
ENSMUSG00000022948.17_0	chr16	-	1792	12	FSM	ENSMUSG00000022948.17	ENSMUST00000233931.2	1826	12	26	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATCATTTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	93400677	93380355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_93380573_93382066_93382191_93383124_93383206_93384706_93384789_93386798_93386974_93387761_93388192_93390134_93390224_93393185_93393224_93396099_93396196_93398525_93398687_93400024_93400100_93400453
ENSMUSG00000022951.17_0	chr16	-	2311	4	FSM	ENSMUSG00000022951.17	ENSMUST00000232239.2	2319	4	9	-1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACGTTGTTGGTCGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	92263022	92188841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_92190517_92192753_92192914_92194150_92194325_92262720
ENSMUSG00000022951.17_1	chr16	-	2037	3	ISM	ENSMUSG00000022951.17	ENST00000620920.4	2107	4	557	6	557	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTTCTGGAGACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	92194364	92188853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_92190517_92192753_92192914_92194150
ENSMUSG00000022951.17_2	chr16	-	2569	5	FSM	ENSMUSG00000022951.17	ENST00000481448.5	2579	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTTCTGGAGACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	92196874	92188853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_92190517_92192753_92192914_92194150_92194446_92195505_92195866_92196783
ENSMUSG00000022951.17_4	chr16	-	2099	4	FSM	ENSMUSG00000022951.17	ENST00000620920.4	2107	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTCTTCTGGAGACGTTG	NA	NA	NA	NA	NA	NA	NA	NA	92194919	92188853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_92190517_92192753_92192914_92194150_92194370_92194862
ENSMUSG00000022952.18_0	chr16	-	5839	8	FSM	ENSMUSG00000022952.18	ENSMUST00000023673.14	5861	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTATGCCCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	92623024	92398362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_92403013_92410486_92410649_92441041_92441234_92465595_92465701_92485863_92486021_92492371_92492626_92622476_92622593_92622821
ENSMUSG00000022952.18_3	chr16	-	4727	5	FSM	ENSMUSG00000022952.18	ENSMUST00000113956.10	4738	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAATAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	92494207	92400545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_92403013_92410486_92410649_92465595_92465701_92485863_92486021_92492371
ENSMUSG00000022956.12_0	chr16	-	820	7	FSM	ENSMUSG00000022956.12	ENSMUST00000023677.10	838	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGAGGGCGTGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	91728566	91722110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91722280_91722428_91722516_91723346_91723460_91723740_91723871_91725786_91725898_91727241_91727293_91728407
ENSMUSG00000022957.21_0	chr16	+	5499	38	FSM	ENSMUSG00000022957.21	ENST00000381285.8	5513	38	9	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATCGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	91526245	91709294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598525_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638499_91645609_91645858_91647693_91647854_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91684287_91684410_91686005_91686113_91690679_91690864_91693214_91693314_91696392_91696561_91702174_91702388_91703645_91703768_91705290_91705374_91705653_91705738_91706092_91706267_91708748
ENSMUSG00000022957.21_1	chr16	+	5373	29	FSM	ENSMUSG00000022957.21	ENST00000381291.8	5392	29	11	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAAGTTAGATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	91526247	91668531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91655096_91655264_91658081_91658128_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUSG00000022957.21_55	chr16	+	3965	27	FSM	ENSMUSG00000022957.21	ENST00000399355.6	3982	27	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGACGGCCCCGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	91526275	91667364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91526488_91579048_91579109_91580950_91581044_91582175_91582240_91590494_91590656_91598414_91598595_91599922_91600020_91602980_91603082_91608977_91609042_91612289_91612428_91613732_91613846_91615295_91615559_91617338_91617489_91617566_91617708_91624748_91624837_91625081_91625222_91633948_91634077_91636503_91636731_91638376_91638509_91645609_91645858_91647693_91647854_91650582_91650789_91651460_91651544_91660144_91660267_91664907_91665026_91666505_91666698_91667080
ENSMUSG00000022960.14_0	chr16	-	2341	10	FSM	ENSMUSG00000022960.14	ENSMUST00000023682.12	2365	10	11	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAATCACAAGAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	91485647	91476165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91476915_91478044_91478258_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ENSMUSG00000022960.14_1	chr16	-	2196	10	FSM	ENSMUSG00000022960.14	ENSMUST00000117159.8	2215	10	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAATCACAAGAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	91485647	91476165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91476915_91478044_91478113_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ENSMUSG00000022960.14_3	chr16	-	2103	9	FSM	ENSMUSG00000022960.14	ENSMUST00000114031.8	2147	9	31	13	31	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAATCACAAGAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	91485622	91476165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91476915_91478982_91479182_91479403_91479509_91479630_91479710_91480520_91480700_91481189_91481369_91483054_91483259_91484682_91484764_91485294
ENSMUSG00000022961.19_0	chr16	+	8720	12	FSM	ENSMUSG00000022961.19	ENSMUST00000117633.8	8731	12	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCTGGCTTTTATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	91444403	91476094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91475041
ENSMUSG00000022961.19_10	chr16	+	7515	7	FSM	ENSMUSG00000022961.19	ENSMUST00000119368.8	7529	7	8	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACTTGTTGTGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91444774	91462590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91461807
ENSMUSG00000022961.19_12	chr16	+	8381	12	FSM	ENSMUSG00000022961.19	ENSMUST00000114037.9	8399	12	12	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTTGTGTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	91444778	91476077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91461085_91461233_91461521_91461711_91467351_91467463_91468236_91468354_91472288_91472437_91474292_91474365_91474476_91474593_91474988
ENSMUSG00000022961.19_15	chr16	+	7932	5	FSM	ENSMUSG00000022961.19	ENSMUST00000114036.9	7945	5	7	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGAGCAGCCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	91444774	91460915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91444873_91448517_91448685_91451498_91457469_91458988_91459150_91459379
ENSMUSG00000022962.16_0	chr16	-	3511	22	FSM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTCACCTGAGGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	91443838	91418078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022962.16_1	chr16	-	3427	21	ISM	ENSMUSG00000022962.16	ENSMUST00000023684.14	3518	22	3817	11	3790	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGATTCCTCACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	91440023	91418084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ENSMUSG00000022962.16_10	chr16	-	1860	11	FSM	ENSMUSG00000022962.16	ENSMUST00000120450.2	1865	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91443823	91430297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440035_91443771
ENSMUSG00000022962.16_7	chr16	-	3272	22	FSM	ENSMUSG00000022962.16	ENSMUST00000232289.2	3276	22	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAAGAAAACTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	91443819	91418295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91418637_91418734_91418851_91419780_91419923_91420258_91420390_91421214_91421353_91422201_91422409_91424914_91425068_91425309_91425562_91426930_91427130_91427493_91427604_91427864_91427960_91430762_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUSG00000022962.16_8	chr16	-	1804	10	ISM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	3783	5	3783	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91440030	91430297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844
ENSMUSG00000022962.16_9	chr16	-	1847	11	FSM	ENSMUSG00000022962.16	ENSMUST00000231380.2	1852	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGTGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91443813	91430297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91430995_91432881_91433051_91433394_91433481_91433879_91433968_91434817_91434944_91435614_91435684_91436227_91436340_91438099_91438275_91438481_91438578_91439844_91440032_91443771
ENSMUSG00000022964.15_0	chr16	-	2332	7	FSM	ENSMUSG00000022964.15	ENSMUST00000023686.15	2347	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCGACATGGAATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	91394680	91371397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91373047_91374861_91374920_91377089_91377183_91378582_91378651_91380163_91380277_91383829_91383970_91394469
ENSMUSG00000022964.15_1	chr16	-	306	4	FSM	ENSMUSG00000022964.15	ENST00000603942.1	319	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCACCGCACACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	91380264	91373002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91373047_91377089_91377183_91378582_91378651_91380163
ENSMUSG00000022965.9_0	chr16	+	3692	7	FSM	ENSMUSG00000022965.9	ENSMUST00000023687.9	3708	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGTAGGATTGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	91343969	91362505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91344121_91351835_91351969_91354772_91354967_91356864_91357014_91357432_91357593_91358507_91358666_91359758
ENSMUSG00000022967.14_0	chr16	+	3892	11	FSM	ENSMUSG00000022967.14	ENSMUST00000023689.11	3909	11	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGATATTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	91282138	91304325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942
ENSMUSG00000022967.14_3	chr16	+	2754	12	FSM	ENSMUSG00000022967.14	ENSMUST00000117748.8	2771	12	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGGATATTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	91282164	91304325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91282305_91286583_91286708_91289518_91289698_91292036_91292192_91292278_91292421_91293031_91293150_91296291_91296492_91296743_91296878_91298509_91298658_91300272_91300416_91301942_91302303_91303414
ENSMUSG00000022969.14_0	chr16	+	1825	7	FSM	ENSMUSG00000022969.14	ENSMUST00000023691.12	1850	7	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAATTTAGGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	91203135	91222710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91203261_91204505_91204630_91208770_91208929_91211500_91211668_91216219_91216368_91218620_91218779_91221765
ENSMUSG00000022971.19_0	chr16	+	3036	9	FSM	ENSMUSG00000022971.19	ENSMUST00000023693.14	3047	9	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAGACTTTATAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91169673	91202469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91196105_91196234_91200597
ENSMUSG00000022971.19_1	chr16	+	1080	7	FSM	ENSMUSG00000022971.19	ENSMUST00000117836.8	1099	7	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTATGGCTCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91169753	91190925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644
ENSMUSG00000022971.19_7	chr16	+	2564	8	FSM	ENSMUSG00000022971.19	ENSMUST00000089042.7	2580	8	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGACACCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	91169790	91202242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91169963_91180748_91180842_91181870_91181913_91182829_91182954_91184831_91185005_91188608_91188767_91190644_91190802_91200597
ENSMUSG00000022972.11_0	chr16	-	1410	7	FSM	ENSMUSG00000022972.11	ENSMUST00000023694.11	1430	7	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTTAACTTGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90731992	90722706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90722971_90723232_90723329_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUSG00000022972.11_4	chr16	-	867	6	FSM	ENSMUSG00000022972.11	ENST00000440966.5	892	6	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAAATACACATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	90731598	90722759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90722971_90723985_90724118_90724237_90724397_90726803_90726872_90727881_90728050_90731469
ENSMUSG00000022973.19_2	chr16	-	7080	32	FSM	ENSMUSG00000022973.19	ENSMUST00000121759.8	7090	32	4	6	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGACTTCTTTACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	90808192	90732985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90735923_90741242_90741464_90741686_90741796_90743679_90743751_90743902_90743942_90744953_90745002_90746586_90746626_90747238_90747374_90748687_90748898_90752196_90752360_90754481_90754561_90757131_90757348_90757447_90757566_90758261_90758419_90760705_90760865_90761100_90761294_90761392_90761534_90764187_90764273_90766070_90766263_90768451_90768476_90770797_90770955_90773486_90773640_90775576_90775659_90776638_90776809_90777836_90777934_90778695_90778758_90784227_90784312_90785029_90785256_90788267_90788536_90790828_90790916_90806911_90807058_90807980
ENSMUSG00000022974.13_0	chr16	-	3948	18	FSM	ENSMUSG00000022974.13	ENSMUST00000118522.8	3973	18	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGCCTTTTGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	90841414	90810932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90812067_90813733_90813889_90816050_90816198_90818938_90819006_90819556_90819634_90820225_90820348_90822034_90822180_90822383_90822584_90823917_90824034_90824117_90824218_90827320_90827445_90830985_90831176_90831687_90831906_90832806_90832911_90833355_90833578_90834129_90834307_90839440_90839570_90840893
ENSMUSG00000022978.12_0	chr16	-	1320	5	FSM	ENSMUSG00000022978.12	ENSMUST00000099554.5	1333	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCATTTGTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90524286	90516206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90516867_90517541_90517639_90518523_90518647_90523180_90523248_90523913
ENSMUSG00000022982.11_0	chr16	+	623	5	FSM	ENSMUSG00000022982.11	ENSMUST00000023707.11	641	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTGTAACTGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	90017652	90023210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90017818_90019667_90019765_90021243_90021314_90022032_90022151_90023037
ENSMUSG00000022983.17_0	chr16	-	4144	20	FSM	ENSMUSG00000022983.17	ENSMUST00000163419.9	4175	20	25	6	25	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	90081171	90025844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUSG00000022983.17_1	chr16	-	4366	20	FSM	ENSMUSG00000022983.17	ENSMUST00000232371.2	4367	20	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACGTTAATGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	90081390	90025844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90027133_90039414_90039541_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046526_90046601_90046941_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUSG00000022983.17_3	chr16	-	4254	20	FSM	ENSMUSG00000022983.17	ENSMUST00000039280.9	4266	20	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCTAATTAGAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	90081310	90025951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90027133_90039414_90039607_90039759_90039847_90039931_90040098_90041097_90041256_90042268_90042426_90044057_90044172_90044532_90044634_90045400_90045592_90046514_90046601_90046944_90047326_90048762_90048872_90049144_90049339_90054140_90054291_90054869_90055010_90055598_90055735_90057028_90057191_90059061_90059107_90059980_90060065_90080890
ENSMUSG00000022986.6_0	chr15	-	2127	8	FSM	ENSMUSG00000022986.6	ENST00000252245.6	2137	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTTTGGCTCAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	101482273	101472842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101473553_101476353_101476600_101476723_101476850_101478594_101478760_101479455_101479552_101480078_101480140_101481056_101481272_101481765
ENSMUSG00000022987.13_0	chr15	-	1344	4	FSM	ENSMUSG00000022987.13	ENST00000448928.7	1360	4	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTATTTCTCACCATTT	NA	NA	NA	NA	NA	NA	NA	NA	98191698	98186261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98187102_98188358_98188473_98190666_98190859_98191500
ENSMUSG00000022992.18_0	chr15	-	3580	10	FSM	ENSMUSG00000022992.18	ENSMUST00000230542.2	3596	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATACTTGGACGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	98432135	98415544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98417429_98418198_98418307_98422339_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022992.18_17	chr15	-	2304	10	FSM	ENSMUSG00000022992.18	ENSMUST00000116400.4	2324	10	10	10	10	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTAAAGTGATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	98432115	98416698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98417429_98418198_98418307_98422441_98422594_98424455_98424553_98426743_98426911_98427170_98427335_98429203_98429319_98429600_98429780_98431398_98431658_98431782
ENSMUSG00000022994.10_1	chr15	-	6051	22	FSM	ENSMUSG00000022994.10	ENST00000357869.8	6065	22	13	1	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98507278	98487874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494397_98494557_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754_98502614_98507085
ENSMUSG00000022994.10_3	chr15	-	5833	21	FSM	ENSMUSG00000022994.10	ENST00000550422.5	5843	21	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98507219	98487874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98490357_98490553_98490679_98491341_98491547_98492211_98492476_98492793_98492924_98493007_98493044_98493920_98494100_98494774_98494892_98495044_98495133_98495260_98495359_98495607_98495756_98495978_98496005_98496237_98496367_98496502_98496645_98496738_98496898_98497780_98497909_98498058_98498171_98498275_98498398_98498791_98498942_98501754_98502614_98507085
ENSMUSG00000022995.17_0	chr1	-	11200	14	FSM	ENSMUSG00000022995.17	ENSMUST00000193703.6	11229	14	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAAAGAGATTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	181847206	181723957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181733463_181733951_181734010_181735862_181735942_181740871_181740939_181744763_181744813_181745822_181745881_181746002_181746149_181746889_181747195_181749222_181749334_181751124_181751406_181758242_181758328_181783958_181784137_181789318_181789485_181847094
ENSMUSG00000022996.16_0	chr15	-	1688	5	FSM	ENSMUSG00000022996.16	ENST00000407467.5	1705	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGATAATTTATTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	98674859	98669711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98670816_98672004_98672066_98672207_98672379_98674398_98674662_98674770
ENSMUSG00000022996.16_2	chr15	-	1600	4	ISM	ENSMUSG00000022996.16	ENST00000407467.5	1705	5	208	6	208	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGATAATTTATTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	98674662	98669711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_98670816_98672004_98672066_98672207_98672379_98674398
ENSMUSG00000022999.16_0	chr15	-	2284	17	FSM	ENSMUSG00000022999.16	ENSMUST00000023736.10	2304	17	17	3	-7	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTTGTCCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98816095	98801800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805417_98805492_98805774_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ENSMUSG00000022999.16_1	chr15	-	2212	16	FSM	ENSMUSG00000022999.16	ENST00000547382.5	2220	16	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGAGCTTGTCCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98816080	98801802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98802390_98802545_98802708_98803796_98803864_98804124_98804216_98805755_98805853_98806400_98806478_98806556_98806641_98806729_98806803_98807083_98807149_98807268_98807338_98809376_98809504_98810024_98810129_98810278_98810419_98811437_98811472_98813017_98813103_98815730
ENSMUSG00000023000.6_0	chr15	-	4225	3	FSM	ENSMUSG00000023000.6	ENSMUST00000023737.6	4242	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAGACGCACGCACGA	NA	NA	NA	NA	NA	NA	NA	NA	98796413	98789041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98792442_98792693_98792956_98795850
ENSMUSG00000023004.9_0	chr15	-	1722	4	FSM	ENSMUSG00000023004.9	ENSMUST00000077577.8	1743	4	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	40978	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAAGAGTTTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	98832436	98829316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98830444_98830572_98830722_98830853_98831077_98832213
ENSMUSG00000023007.16_0	chr15	+	3295	26	FSM	ENSMUSG00000023007.16	ENSMUST00000145482.8	3308	26	5	8	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACAACTCCTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	99193156	99214891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99193310_99201163_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213363_99213463_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUSG00000023007.16_2	chr15	+	3112	25	FSM	ENSMUSG00000023007.16	ENSMUST00000118287.9	3129	25	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTATAACATGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	99201169	99214876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99201245_99201921_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUSG00000023007.16_5	chr15	+	3038	24	ISM	ENSMUSG00000023007.16	ENSMUST00000118287.9	3129	25	759	9	759	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAACATGATCTACAA	NA	NA	NA	NA	NA	NA	NA	NA	99201923	99214879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_99202066_99202305_99202372_99203046_99203075_99203288_99203315_99203421_99203533_99203831_99203953_99204042_99204068_99204276_99204481_99204685_99204813_99204893_99204959_99205437_99205603_99205702_99205812_99206071_99206223_99206943_99207078_99207565_99207681_99207824_99207917_99212458_99212576_99212723_99212862_99213071_99213168_99213360_99213451_99213603_99213782_99213967_99214030_99214123_99214262_99214341
ENSMUSG00000023008.19_0	chr15	-	4131	25	FSM	ENSMUSG00000023008.19	ENSMUST00000081224.14	4137	25	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	99268327	99215108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99216254_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ENSMUSG00000023008.19_1	chr15	-	4412	27	FSM	ENSMUSG00000023008.19	ENSMUST00000088233.13	4423	27	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAGTCTTGCACCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	99268355	99215108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99216254_99216798_99216899_99217011_99217136_99217442_99217536_99217865_99217968_99218233_99218395_99218916_99219047_99219135_99219217_99219314_99219384_99219511_99219747_99220075_99220279_99220483_99220609_99220692_99220762_99221200_99221481_99222621_99222724_99223121_99223272_99223523_99223635_99223734_99223810_99225395_99225490_99225701_99225779_99225938_99226048_99227160_99227314_99229867_99229952_99232734_99232812_99233568_99233650_99235510_99235595_99268057
ENSMUSG00000023009.15_0	chr15	-	4845	13	FSM	ENSMUSG00000023009.15	ENSMUST00000023747.14	4853	13	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGACTGTTGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	99355627	99319921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99320790_99321016_99321160_99321246_99321556_99321833_99321916_99321998_99322159_99323433_99326049_99327234_99327349_99330585_99330706_99331325_99331365_99331450_99331520_99331920_99332071_99333907_99333969_99355512
ENSMUSG00000023010.16_0	chr15	+	2442	10	FSM	ENSMUSG00000023010.16	ENSMUST00000023749.15	2452	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTCTCAGTGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	99290772	99307930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99290922_99299460_99299545_99299941_99300051_99302294_99302416_99303597_99303647_99303741_99303840_99304032_99304113_99304457_99304559_99305148_99305225_99306355
ENSMUSG00000023011.9_0	chr15	-	4111	12	FSM	ENSMUSG00000023011.9	ENSMUST00000231171.2	4168	12	44	13	34	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAATTACGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	99425549	99394909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99398179_99408462_99408517_99410376_99410473_99410661_99410750_99411229_99411268_99411797_99411838_99412280_99412332_99418182_99418237_99418589_99418655_99419049_99419118_99422581_99422781_99425460
ENSMUSG00000023011.9_1	chr15	-	1776	13	FSM	ENSMUSG00000023011.9	ENST00000320634.8	1792	13	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGAGGGTGGTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	99425572	99396538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99396908_99397672_99398179_99408462_99408517_99410376_99410473_99410661_99410750_99411229_99411268_99411797_99411838_99412280_99412332_99418182_99418237_99418589_99418655_99419049_99419154_99422581_99422781_99425460
ENSMUSG00000023015.15_1	chr15	-	3034	18	FSM	ENSMUSG00000023015.15	ENSMUST00000171702.8	3052	18	9	9	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAAAGTGATGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	99549515	99518385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99541273_99541405_99549387
ENSMUSG00000023015.15_2	chr15	-	2913	17	FSM	ENSMUSG00000023015.15	ENSMUST00000023756.12	2933	17	12	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAAAGTGATGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	99549525	99518385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99519346_99520099_99520206_99521449_99521574_99521807_99521941_99522118_99522225_99524063_99524263_99524342_99524439_99526514_99526680_99528989_99529121_99529960_99530079_99530595_99530677_99532122_99532177_99534012_99534083_99535518_99535656_99537494_99537701_99540763_99540853_99549387
ENSMUSG00000023017.11_0	chr15	+	4105	12	FSM	ENSMUSG00000023017.11	ENSMUST00000023758.9	4114	12	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATCTCTTCAGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	99568252	99599004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99568776_99569664_99570043_99570748_99570945_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ENSMUSG00000023017.11_1	chr15	+	1803	10	FSM	ENSMUSG00000023017.11	ENSMUST00000228185.2	1818	10	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTCGCCAGCCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	99590126	99597017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99590909_99592574_99592726_99593353_99593482_99594392_99594544_99594852_99594910_99595319_99595474_99595927_99596020_99596510_99596591_99596675_99596781_99596914
ENSMUSG00000023018.6_0	chr15	+	3283	13	FSM	ENSMUSG00000023018.6	ENSMUST00000023759.6	3307	13	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCAGGTCCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	99600025	99611864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99600380_99600986_99601175_99601471_99601515_99601618_99601742_99602211_99602335_99603507_99603625_99605191_99605294_99605520_99605683_99605765_99605864_99607161_99607298_99608973_99609097_99610039_99610142_99610252
ENSMUSG00000023019.13_0	chr15	+	2852	8	FSM	ENSMUSG00000023019.13	ENSMUST00000023760.13	2861	8	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGGAAGAGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	99615402	99622884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99615530_99616032_99616211_99617014_99617156_99617976_99618116_99618446_99618560_99619815_99620050_99620336_99620444_99621071
ENSMUSG00000023020.4_0	chr15	+	2072	2	FSM	ENSMUSG00000023020.4	ENSMUST00000023761.4	2090	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGATTTCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	99623536	99627404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99623730_99625525
ENSMUSG00000023021.16_0	chr15	-	2755	11	FSM	ENSMUSG00000023021.16	ENSMUST00000109035.11	2775	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAGTTGCCTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	99670330	99632768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99634318_99635427_99635535_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023021.16_1	chr15	-	2079	10	FSM	ENSMUSG00000023021.16	ENSMUST00000023762.13	2096	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTCTACTGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	99670472	99633479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99634318_99636545_99636703_99637286_99637394_99637482_99637612_99638824_99638918_99639489_99639541_99643769_99643828_99644917_99645049_99649116_99649223_99670063
ENSMUSG00000023022.15_0	chr15	-	4090	8	FSM	ENSMUSG00000023022.15	ENSMUST00000109024.9	4109	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACATTTCCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	99718013	99676358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374
ENSMUSG00000023022.15_1	chr15	-	4224	11	FSM	ENSMUSG00000023022.15	ENSMUST00000073691.5	4243	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTACATTTCCAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	99773326	99676358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99679172_99681400_99681535_99692289_99692400_99694622_99694681_99699991_99700094_99704303_99704453_99705539_99705625_99717374_99717840_99724672_99724719_99741555_99741705_99773213
ENSMUSG00000023025.17_0	chr15	+	6504	16	FSM	ENSMUSG00000023025.17	ENSMUST00000100206.4	6530	16	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTATTGAAAAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	99870669	99914222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99870865_99882800_99882937_99883918_99884075_99885283_99885360_99888173_99888311_99889605_99889710_99891203_99891315_99892544_99892599_99894347_99894558_99895253_99895358_99898716_99898930_99899682_99899732_99903121_99903284_99905487_99905610_99908172_99908342_99909716
ENSMUSG00000023026.17_0	chr15	+	8899	38	FSM	ENSMUSG00000023026.17	ENSMUST00000100203.10	8914	38	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTTGATTATGTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	99936552	100117347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99936791_100013725_100013798_100029782_100029909_100039902_100040029_100049031_100049245_100052037_100052188_100052914_100053038_100055050_100055249_100055757_100055850_100058322_100058434_100059858_100059983_100060559_100060670_100065736_100065840_100067147_100067213_100069000_100069095_100069483_100069604_100071097_100071213_100072307_100072448_100073081_100073219_100076322_100076404_100079189_100079318_100080887_100081003_100084021_100084224_100087912_100088023_100088136_100088218_100088867_100088992_100091720_100091843_100093671_100093784_100096821_100096932_100097340_100097472_100100068_100100238_100101012_100101184_100102963_100103026_100104277_100104336_100105638_100105714_100107459_100107638_100109864_100109989_100113058
ENSMUSG00000023027.14_0	chr15	+	2347	7	FSM	ENSMUSG00000023027.14	ENSMUST00000023769.11	2365	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATTAAGTTTTCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	100125711	100159119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100125964_100130613_100130713_100143125_100143227_100149949_100150081_100151974_100152155_100152234_100152395_100157695
ENSMUSG00000023030.17_0	chr15	-	3007	17	FSM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTAAAAGCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100320929	100285789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000023030.17_1	chr15	-	2921	16	ISM	ENSMUSG00000023030.17	ENSMUST00000023774.12	3025	17	10792	11	10739	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTAAAAGCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100310144	100285789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_100287043_100293150_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071
ENSMUSG00000023030.17_10	chr15	-	4412	16	FSM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGAGGGACACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100320883	100290446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071_100310144_100320842
ENSMUSG00000023030.17_9	chr15	-	4361	15	ISM	ENSMUSG00000023030.17	ENSMUST00000138843.8	4415	16	10750	3	10750	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGAGGGACACACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100310133	100290446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_100293205_100295544_100295699_100297294_100297369_100299148_100299299_100299432_100299553_100300178_100300266_100301061_100301221_100301688_100301845_100303456_100303525_100303624_100303696_100304160_100304268_100305981_100306102_100307080_100307207_100307963_100308113_100310071
ENSMUSG00000023031.9_0	chr15	-	1095	8	FSM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	6	7	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATACTGTGTGCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100585796	100572308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014_100583116_100585005_100585089_100585734
ENSMUSG00000023031.9_1	chr15	-	1032	7	ISM	ENSMUSG00000023031.9	ENSMUST00000023775.9	1108	8	715	7	715	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATACTGTGTGCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100585087	100572308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_100572599_100573204_100573355_100579023_100579170_100580767_100580905_100582460_100582587_100583014_100583116_100585005
ENSMUSG00000023032.13_0	chr15	+	11771	25	FSM	ENSMUSG00000023032.13	ENSMUST00000023776.13	11790	25	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTGATTGCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100659638	100721841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100659856_100672510_100672593_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ENSMUSG00000023032.13_2	chr15	+	439	3	FSM	ENSMUSG00000023032.13	ENSMUST00000161564.2	445	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCAGTTTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	100659751	100672961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100659856_100672510_100672593_100672708
ENSMUSG00000023032.13_4	chr15	+	3526	24	FSM	ENSMUSG00000023032.13	ENSMUST00000162049.2	3532	24	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGACATTTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	100679134	100713810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100679220_100680826_100680977_100681667_100681804_100682595_100682757_100685044_100685234_100686040_100686127_100686890_100687049_100687715_100687804_100688786_100688934_100689477_100689579_100693643_100693819_100694385_100694520_100695873_100696120_100697527_100697634_100698360_100698523_100701115_100701230_100704130_100704293_100705081_100705334_100707175_100707245_100708474_100708649_100709423_100709556_100710987_100711080_100712330_100712427_100713499
ENSMUSG00000023034.8_1	chr15	+	2635	8	FSM	ENSMUSG00000023034.8	ENST00000243050.5	2649	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTGAGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101164696	101172668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101164853_101165608_101165745_101167963_101168851_101169616_101169747_101170033_101170186_101170598_101170802_101170895_101171075_101171876
ENSMUSG00000023036.15_0	chr18	+	5018	4	FSM	ENSMUSG00000023036.15	ENSMUST00000066140.13	5024	4	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37948134	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37951037_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000023039.18_0	chr15	+	4084	9	FSM	ENSMUSG00000023039.18	ENSMUST00000068904.9	4094	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTTTATATTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	101310282	101328184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101310661_101311849_101312062_101314101_101314163_101316198_101316295_101317383_101317549_101318354_101318481_101321150_101321372_101324969_101325005_101325394
ENSMUSG00000023044.3_0	chr15	-	2266	15	FSM	ENSMUSG00000023044.3	ENSMUST00000023805.3	2279	15	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATTTTGGTATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102097484	102085437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102086222_102086961_102087052_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUSG00000023044.3_2	chr15	-	1778	14	FSM	ENSMUSG00000023044.3	ENSMUST00000230288.2	1786	14	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	102097402	102085753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102086222_102087215_102087268_102087395_102087596_102087955_102088038_102088263_102088329_102088405_102088523_102094432_102094488_102094828_102094909_102095488_102095605_102096000_102096108_102096441_102096533_102096616_102096744_102096977_102097115_102097321
ENSMUSG00000023045.14_0	chr15	+	1239	11	FSM	ENSMUSG00000023045.14	ENST00000301466.8	1251	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCAAGGCTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	102062700	102071380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102062804_102065246_102065524_102066046_102066122_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023045.14_10	chr15	+	1138	10	ISM	ENSMUSG00000023045.14	ENST00000301466.8	1251	11	2549	7	2549	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCAAGGCTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	102065244	102071380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102065524_102066046_102066122_102066512_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023045.14_6	chr15	+	1203	11	ISM	ENSMUSG00000023045.14	ENSMUST00000023806.14	2208	15	3776	524	41	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTCAAGGCTTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	102062736	102071380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102062804_102065246_102065524_102066046_102066117_102066507_102066593_102066988_102067035_102067148_102067279_102069024_102069123_102069486_102069586_102070443_102070580_102070988_102071135_102071331
ENSMUSG00000023046.7_0	chr15	+	1103	4	FSM	ENSMUSG00000023046.7	ENSMUST00000023807.7	1112	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTCTGCGTCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	102052805	102057946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102053320_102056279_102056414_102056536_102056660_102057614
ENSMUSG00000023047.12_0	chr15	+	1311	8	FSM	ENSMUSG00000023047.12	ENST00000379791.7	1327	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCCGATCCTGTAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	102354253	102362893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102354423_102354698_102354891_102355142_102355215_102355434_102355548_102355665_102355897_102360583_102360699_102360821_102360995_102362647
ENSMUSG00000023048.14_0	chr15	+	1210	5	FSM	ENSMUSG00000023048.14	ENSMUST00000023810.12	1224	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTGGGCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102367616	102371234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102367691_102367898_102368017_102368542_102368582_102368804_102369155_102370605
ENSMUSG00000023048.14_11	chr15	+	957	2	ISM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	286	0	286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	102368803	102371211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102369155_102370605
ENSMUSG00000023048.14_3	chr15	+	1049	4	FSM	ENSMUSG00000023048.14	ENSMUST00000164957.8	1055	4	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	102367636	102371211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102367691_102368542_102368582_102368804_102369155_102370605
ENSMUSG00000023048.14_7	chr15	+	1135	4	FSM	ENSMUSG00000023048.14	ENSMUST00000171245.8	1353	4	230	-12	230	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACCTTGACTGGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	102367896	102371231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102368017_102368542_102368582_102368804_102369155_102370605
ENSMUSG00000023048.14_8	chr15	+	995	3	FSM	ENSMUSG00000023048.14	ENSMUST00000164688.2	1020	3	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTCTACTCACCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	102368542	102371211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102368582_102368804_102369155_102370605
ENSMUSG00000023050.10_3	chr15	-	5176	14	FSM	ENSMUSG00000023050.10	ENSMUST00000023812.10	5185	14	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTCAGAAATTATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102425271	102406089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102425222
ENSMUSG00000023050.10_4	chr15	-	5134	13	ISM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	5131	-1127	5131	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATTATTTGTCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	102414004	102406083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524
ENSMUSG00000023050.10_6	chr15	-	4303	16	FSM	ENSMUSG00000023050.10	ENSMUST00000171565.8	4318	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCCAAACAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	102419124	102407214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417833_102418353_102418441_102419018
ENSMUSG00000023050.10_8	chr15	-	4184	16	FSM	ENSMUSG00000023050.10	ENSMUST00000169377.8	4210	16	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGGGAAGAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	102425480	102407466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102408612_102408942_102409205_102409286_102409358_102409535_102410161_102410268_102410407_102410500_102410618_102410749_102410860_102411071_102411181_102411923_102412083_102412159_102412319_102412549_102412742_102412904_102413089_102413524_102414004_102417724_102417814_102418353_102418441_102425222
ENSMUSG00000023051.12_0	chr15	+	1271	7	FSM	ENSMUSG00000023051.12	ENSMUST00000100168.10	1278	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCCTGCTCTCTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	102426798	102432037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102427038_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_11	chr15	+	1514	9	FSM	ENSMUSG00000023051.12	ENSMUST00000023813.9	1523	9	7	2	7	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTGTTCTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	102426900	102432109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102427038_102427556_102427727_102428909_102429013_102429555_102429649_102430158_102430232_102430415_102430534_102430858_102430987_102431283_102431486_102431619
ENSMUSG00000023051.12_3	chr15	+	899	6	FSM	ENSMUSG00000023051.12	ENST00000552857.5	912	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTCCAGAGGTGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	102426862	102431857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102427038_102429555_102429649_102430158_102430232_102430415_102430534_102431283_102431486_102431619
ENSMUSG00000023055.11_0	chr15	-	2808	15	FSM	ENSMUSG00000023055.11	ENSMUST00000023818.11	2824	15	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAACCATTGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	102630605	102615219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102615982_102616980_102617088_102617510_102617711_102617877_102617987_102618305_102618402_102618839_102618966_102619348_102619604_102619777_102619934_102622290_102622382_102624176_102624326_102624664_102624824_102626237_102626429_102627408_102627512_102627976_102628157_102630481
ENSMUSG00000023067.15_2	chr17	+	906	3	FSM	ENSMUSG00000023067.15	ENSMUST00000119901.9	922	3	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATACCGGAGGAACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29309968	29318675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29310076_29317370_29317812_29318317
ENSMUSG00000023067.15_4	chr17	+	1901	3	FSM	ENSMUSG00000023067.15	ENSMUST00000023829.8	1913	3	6	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTATAATGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	29312748	29319690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29312836_29317370_29317812_29318317
ENSMUSG00000023067.15_6	chr17	+	1816	2	FSM	ENSMUSG00000023067.15	ENSMUST00000122348.3	1172	2	495	-1139	495	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTTATAATGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	29317368	29319690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29317812_29318317
ENSMUSG00000023068.17_0	chr10	+	4591	5	FSM	ENSMUSG00000023068.17	ENSMUST00000023830.16	4605	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTATACACCTAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	52293648	52316271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_52294265_52305288_52305415_52306162_52306313_52309440_52309541_52312672
ENSMUSG00000023070.7_0	chrX	+	826	5	FSM	ENSMUSG00000023070.7	ENST00000457380.5	837	5	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGAGATGGCCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20415932	20426367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20416113_20416601_20416781_20418558_20418742_20425593_20425726_20426215
ENSMUSG00000023072.15_0	chr7	+	2592	19	FSM	ENSMUSG00000023072.15	ENSMUST00000079414.12	2610	19	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACACTTTTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	35096489	35138106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_35096632_35097414_35097522_35102434_35102594_35105042_35105221_35109005_35109118_35113568_35113598_35115841_35115885_35117066_35117286_35117643_35117787_35119671_35119723_35120299_35120384_35122724_35122829_35124081_35124198_35127024_35127206_35127624_35127793_35128581_35128724_35131942_35132033_35134898_35135069_35137752
ENSMUSG00000023074.12_0	chrX	-	1745	6	FSM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	6	22	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTACCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52459373	52433906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUSG00000023074.12_1	chrX	-	1669	5	ISM	ENSMUSG00000023074.12	ENSMUST00000096447.9	1773	6	12676	22	12676	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTACCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52446703	52433906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_52434867_52436580_52436743_52444532_52444751_52446286_52446363_52446450
ENSMUSG00000023074.12_2	chrX	-	1723	6	FSM	ENSMUSG00000023074.12	ENSMUST00000023836.4	1763	6	28	12	28	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTTACCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52459351	52433909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52434867_52436580_52436743_52444529_52444751_52446286_52446363_52446450_52446705_52459298
ENSMUSG00000023075.10_0	chr4	-	3024	5	FSM	ENSMUSG00000023075.10	ENSMUST00000102636.4	3052	5	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCTACAAAAACTACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	123644124	123628365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123637225_123637367_123643740
ENSMUSG00000023075.10_4	chr4	-	1309	4	FSM	ENSMUSG00000023075.10	ENST00000372984.8	1317	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCTGAACTTCTACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	123644046	123629861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123630658_123631801_123631874_123632935_123633071_123643740
ENSMUSG00000023075.10_6	chr4	-	1223	4	FSM	ENSMUSG00000023075.10	ENST00000446189.6	1233	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGTGCTGGAAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	123644044	123629951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123630658_123631801_123631874_123637225_123637367_123643740
ENSMUSG00000023079.15_0	chr5	-	3494	30	FSM	ENSMUSG00000023079.15	ENSMUST00000171794.9	3524	30	7	23	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	134485563	134386532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_1	chr5	-	3438	30	FSM	ENSMUSG00000023079.15	ENSMUST00000111244.5	3461	30	0	23	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATGAAAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	134485110	134386532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134484965
ENSMUSG00000023079.15_14	chr5	-	3297	29	FSM	ENSMUSG00000023079.15	ENSMUST00000111245.9	3299	29	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCTTTTTAAATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	134485442	134386551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_21	chr5	-	3323	27	FSM	ENSMUSG00000023079.15	ENSMUST00000074114.12	3330	27	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGTAGAAGGGGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	134485430	134387433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134387973_134389091_134389130_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_22	chr5	-	3492	28	FSM	ENSMUSG00000023079.15	ENSMUST00000202554.4	3514	28	15	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGTAGAAGGGGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	134485428	134387433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_23	chr5	-	3648	30	FSM	ENSMUSG00000023079.15	ENSMUST00000100652.10	3693	30	23	22	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATGTAAAAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	134485523	134387510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_26	chr5	-	3474	29	FSM	ENSMUSG00000023079.15	ENSMUST00000100650.10	3487	29	5	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTCATGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134485435	134387515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_3	chr5	-	3547	31	FSM	ENSMUSG00000023079.15	ENSMUST00000073161.12	3572	31	2	23	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAGTAAAGAAAATGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134485540	134386537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134389807_134390001_134390522_134390601_134391364_134391403_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023079.15_6	chr5	-	3266	28	FSM	ENSMUSG00000023079.15	ENSMUST00000200944.4	3133	28	-136	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAAGAAAATGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	134485566	134386535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134386751_134387841_134387973_134389091_134389130_134392035_134392229_134392755_134392834_134395689_134395771_134404960_134404990_134405747_134405932_134408790_134408875_134411383_134411441_134411634_134411685_134412593_134412778_134413872_134413939_134414643_134414692_134417287_134417378_134417984_134418066_134418527_134418566_134419675_134419785_134421248_134421275_134424470_134424655_134430964_134431049_134432585_134432676_134433509_134433821_134437980_134438165_134439807_134439964_134443988_134444131_134445906_134446036_134485362
ENSMUSG00000023084.12_0	chr3	-	3946	15	FSM	ENSMUSG00000023084.12	ENSMUST00000023846.11	3988	15	37	5	37	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAGACAACTTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87655893	87644234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87646493_87646655_87646778_87647138_87647254_87648281_87648371_87648742_87648837_87649020_87649171_87649930_87650021_87650092_87650177_87650249_87650410_87650598_87650668_87652529_87652608_87652755_87652832_87652975_87653105_87653188_87653339_87655611
ENSMUSG00000023084.12_1	chr3	-	1486	14	FSM	ENSMUSG00000023084.12	ENST00000337428.8	1502	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGCTGCAGCTACCTAG	NA	NA	NA	NA	NA	NA	NA	NA	87653330	87646401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87646493_87646655_87646778_87647138_87647251_87648281_87648371_87648742_87648837_87649020_87649171_87649930_87650021_87650092_87650177_87650249_87650410_87650598_87650668_87652529_87652608_87652755_87652832_87652975_87653105_87653188
ENSMUSG00000023087.16_0	chr3	+	3049	3	FSM	ENSMUSG00000023087.16	ENSMUST00000023849.15	3059	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTCTAAAAGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	51131877	51159065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51132709_51155225_51155496_51157117
ENSMUSG00000023087.16_1	chr3	+	9780	2	FSM	ENSMUSG00000023087.16	ENSMUST00000144826.2	9797	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAGTGCTTTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	51147635	51159037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51155496_51157117
ENSMUSG00000023088.18_0	chr16	+	6770	31	FSM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	2	20	2	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGAATCTAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	14179425	14293581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_14179508_14207670_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ENSMUSG00000023088.18_8	chr16	+	6688	30	ISM	ENSMUSG00000023088.18	ENSMUST00000100167.10	6792	31	28246	21	28246	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAATGAATCTAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	14207669	14293580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_14207848_14209181_14209308_14211816_14211955_14214214_14214341_14221853_14221916_14222877_14223010_14228563_14228798_14229312_14229491_14231084_14231247_14237563_14237657_14240920_14241125_14254370_14254518_14255509_14255598_14257850_14257924_14261211_14261339_14263156_14263334_14265341_14265510_14266263_14266448_14275751_14275834_14276860_14276994_14277620_14277832_14278761_14279073_14282906_14283107_14283967_14284095_14284860_14284963_14285686_14285834_14288333_14288493_14289801_14289969_14290674_14290870_14291323
ENSMUSG00000023089.13_0	chr6	-	860	5	FSM	ENSMUSG00000023089.13	ENSMUST00000023851.9	875	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAAATGTGTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	24528002	24518669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_24518824_24519190_24519257_24522657_24522775_24527271_24527317_24527524
ENSMUSG00000023092.17_0	chrX	+	2339	7	FSM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	5	12	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGAGCACGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55777151	55838694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55777229_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_5	chrX	+	2750	8	FSM	ENSMUSG00000023092.17	ENSMUST00000114769.9	2770	8	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAGAAAGAGCACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55777237	55838691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55777529_55799694_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55836598_55836799_55837203
ENSMUSG00000023092.17_6	chrX	+	2260	6	ISM	ENSMUSG00000023092.17	ENSMUST00000023854.10	2356	7	22550	12	22208	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAGAGCACGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55799696	55838694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_55799752_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_7	chrX	+	2288	6	FSM	ENSMUSG00000023092.17	ENSMUST00000114773.10	2298	6	1	9	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAGAAAGAGCACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55824797	55838691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55824884_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_8	chrX	+	2270	6	FSM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	4	9	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAGAAAGAGCACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	55825086	55838691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55825155_55833348_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023092.17_9	chrX	+	2199	5	ISM	ENSMUSG00000023092.17	ENSMUST00000114772.9	2283	6	8266	12	8259	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCATAGAAAGAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	55833348	55838688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_55833531_55834503_55834679_55835236_55835407_55835823_55836011_55837203
ENSMUSG00000023094.15_0	chr2	+	1188	5	FSM	ENSMUSG00000023094.15	ENSMUST00000023856.9	1196	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTACTTTTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	19376446	19399779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_19376591_19382972_19383074_19388051_19388129_19398018_19398167_19399061
ENSMUSG00000023104.10_0	chr5	+	4981	11	FSM	ENSMUSG00000023104.10	ENSMUST00000023867.8	4995	11	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTATATGATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	134611552	134630654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134611741_134615751_134615822_134617785_134617828_134618208_134618316_134619729_134619832_134619972_134620074_134622042_134622201_134623062_134623129_134624136_134624218_134625735_134625850_134626702
ENSMUSG00000023106.16_0	chr5	+	2315	8	FSM	ENSMUSG00000023106.16	ENSMUST00000023869.15	2339	8	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTAAAAATGAAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124045246	124066883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124045430_124046162_124046278_124053253_124053274_124055262_124055348_124060242_124060327_124062793_124062911_124065060_124065201_124065312
ENSMUSG00000023110.13_0	chr14	-	2683	17	FSM	ENSMUSG00000023110.13	ENSMUST00000023873.12	2691	17	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCCTGCTTCTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	54754974	54744643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754703
ENSMUSG00000023110.13_26	chr14	-	1818	16	FSM	ENSMUSG00000023110.13	ENST00000553897.5	1830	16	12	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAGTGTCAAAACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	54754843	54745245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752849_54753953_54754073_54754703
ENSMUSG00000023110.13_7	chr14	-	1574	13	FSM	ENSMUSG00000023110.13	ENST00000397440.8	1600	13	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCTGCTGGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	54754791	54745186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023110.13_8	chr14	-	2089	17	FSM	ENSMUSG00000023110.13	ENST00000397441.6	2107	17	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCTGCTGGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	54754844	54745186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54745405_54746348_54746414_54746745_54746863_54747000_54747095_54747290_54747401_54748335_54748512_54748597_54748721_54748804_54748864_54748958_54749037_54749449_54749612_54750747_54750912_54752053_54752104_54752231_54752345_54752759_54752895_54753562_54753649_54753953_54754073_54754624
ENSMUSG00000023118.16_0	chr7	+	4097	27	FSM	ENSMUSG00000023118.16	ENSMUST00000023882.14	4116	27	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAGAAATCCTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	18758310	18788532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18758432_18762788_18762913_18763039_18763106_18764467_18764522_18764603_18764678_18768331_18768459_18769750_18770001_18770586_18770758_18771784_18772025_18774014_18774170_18774466_18774618_18776502_18776708_18777349_18777501_18778859_18779096_18779556_18779639_18779772_18779887_18780679_18780828_18781374_18781536_18782373_18782483_18782764_18782866_18783304_18783396_18783862_18783965_18786291_18786480_18787194_18787372_18787471_18787568_18787839_18788224_18788313
ENSMUSG00000023143.11_0	chr16	-	2121	10	FSM	ENSMUSG00000023143.11	ENSMUST00000023911.11	2143	10	13	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTAAAACAAGCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5021863	5013161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204_5021664_5021760
ENSMUSG00000023143.11_1	chr16	-	2205	9	FSM	ENSMUSG00000023143.11	ENSMUST00000147567.2	2230	9	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTAAAACAAGCCACCAG	NA	NA	NA	NA	NA	NA	NA	NA	5021850	5013161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5013923_5015418_5015483_5015575_5015678_5016439_5016488_5016594_5016801_5017479_5017609_5017806_5017916_5019237_5019378_5021204
ENSMUSG00000023147.18_0	chr16	+	2478	5	FSM	ENSMUSG00000023147.18	ENSMUST00000023913.11	2495	5	11	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	95946617	95959046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95946779_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUSG00000023147.18_1	chr16	+	2660	5	FSM	ENSMUSG00000023147.18	ENSMUST00000232832.2	2678	5	12	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTACTGTGGAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	95946622	95959046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95946966_95953012_95953179_95954170_95954239_95955280_95955396_95957078
ENSMUSG00000023147.18_2	chr16	+	2397	4	FSM	ENSMUSG00000023147.18	ENSMUST00000233566.2	2415	4	10	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGGACTGGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	95946622	95959038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95946779_95953012_95953179_95955280_95955396_95957078
ENSMUSG00000023150.15_0	chr1	+	3489	15	FSM	ENSMUSG00000023150.15	ENSMUST00000023918.13	3511	15	15	7	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTGCACTGTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	151220242	151240166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_12	chr1	+	3322	14	FSM	ENSMUSG00000023150.15	ENSMUST00000097543.8	3337	14	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAATCCTTGCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	151220280	151240163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151231879_151231988_151235372_151235503_151235703_151235929_151236468_151236591_151236682_151236810_151236893_151237026_151237212_151237387_151238862
ENSMUSG00000023150.15_9	chr1	+	2762	8	FSM	ENSMUSG00000023150.15	ENSMUST00000111887.10	2783	8	16	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGAGTTACGTCTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151220275	151232545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151220507_151225126_151225355_151226731_151226861_151227304_151227475_151227580_151227657_151229670_151229845_151230384_151230511_151230917
ENSMUSG00000023156.5_0	chr14	-	2380	6	FSM	ENSMUSG00000023156.5	ENSMUST00000023924.4	2401	6	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATATGTGTGTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	14389393	14377946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14379866_14380975_14381055_14382232_14382310_14385771_14385857_14385978_14386066_14389260
ENSMUSG00000023169.16_0	chr15	-	6934	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088454.13	6966	16	22	10	-15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGTACTTCCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	96540109	96469308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540008
ENSMUSG00000023169.16_1	chr15	-	7249	16	FSM	ENSMUSG00000023169.16	ENSMUST00000088452.11	7266	16	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAGTACTTCCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	96540787	96469308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96540371
ENSMUSG00000023169.16_3	chr15	-	3164	16	FSM	ENSMUSG00000023169.16	ENSMUST00000100262.4	3183	16	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAGGAACAATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	96539832	96473875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96474694_96476410_96476509_96476601_96476744_96477195_96477315_96482224_96482326_96483430_96483511_96484742_96484854_96484972_96485032_96486808_96486892_96487940_96488023_96488300_96488394_96490387_96490462_96507736_96507853_96514022_96514099_96521836_96522051_96538934
ENSMUSG00000023170.15_0	chr11	+	1286	11	FSM	ENSMUSG00000023170.15	ENSMUST00000072581.9	1311	11	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATGTACAAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69804726	69807390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69804901_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUSG00000023170.15_3	chr11	+	1152	11	FSM	ENSMUSG00000023170.15	ENSMUST00000116358.8	1159	11	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCATCATGCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69804875	69807409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69804897_69805098_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUSG00000023170.15_6	chr11	+	1178	10	FSM	ENSMUSG00000023170.15	ENSMUST00000057884.6	1220	10	34	8	34	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACCATCATGCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	69805051	69807409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69805260_69805577_69805688_69805758_69805872_69805964_69806045_69806133_69806217_69806456_69806611_69806690_69806781_69806858_69806939_69807023_69807120_69807245
ENSMUSG00000023175.16_11	chr10	+	1164	6	FSM	ENSMUSG00000023175.16	ENSMUST00000105381.5	1240	6	72	4	72	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTGTGTGTCACTACT	NA	NA	NA	NA	NA	NA	NA	NA	79545503	79547799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUSG00000023175.16_2	chr10	+	1252	7	FSM	ENSMUSG00000023175.16	ENSMUST00000179781.8	1261	7	5	4	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTGTGTGTCACTACT	NA	NA	NA	NA	NA	NA	NA	NA	79540329	79547799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79540419_79545504_79545662_79545891_79545975_79546093_79546237_79546471_79546755_79547089_79547115_79547327
ENSMUSG00000023186.15_0	chr9	+	4149	20	FSM	ENSMUSG00000023186.15	ENSMUST00000001544.12	4157	20	8	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCAAACTTTGTTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	38629571	38654633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_38629684_38630553_38630630_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ENSMUSG00000023186.15_5	chr9	+	3472	19	FSM	ENSMUSG00000023186.15	ENSMUST00000118144.8	3502	19	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTGACTCATTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38629590	38654051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_38629684_38633668_38633727_38633841_38634045_38634322_38634546_38634662_38634839_38635141_38635257_38638238_38638409_38639049_38639139_38639289_38639435_38639917_38639998_38645160_38645276_38645992_38646158_38646854_38646956_38647247_38647502_38649038_38649105_38649198_38649298_38649781_38649913_38652393_38652521_38652989
ENSMUSG00000023191.10_0	chr6	-	2833	15	FSM	ENSMUSG00000023191.10	ENSMUST00000023958.10	2850	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAAGGCCTGGTCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	124834704	124818057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124818803_124819034_124819176_124821978_124822055_124822164_124822283_124822470_124822622_124822904_124823007_124827588_124827714_124827880_124827949_124828041_124828095_124830013_124830104_124831273_124831411_124831810_124831943_124832043_124832240_124832906_124833060_124834158
ENSMUSG00000023206.17_0	chr2	+	1612	7	FSM	ENSMUSG00000023206.17	ENSMUST00000128156.9	1624	7	2	10	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTACAAAAAGCATTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	11710181	11738769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_11710390_11723074_11723270_11724823_11724917_11728223_11728422_11728906_11728940_11735381_11735458_11737960
ENSMUSG00000023216.14_0	chr2	-	1631	10	FSM	ENSMUSG00000023216.14	ENST00000540029.5	1655	10	13	11	13	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAAGAGATATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	120865058	120851896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120852014_120852212_120852374_120854965_120855266_120856224_120856468_120857176_120857281_120857562_120857702_120858124_120858303_120859532_120859638_120860448_120860568_120864893
ENSMUSG00000023224.13_0	chr2	-	1754	8	FSM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTACAAATAAAACTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	84605747	84595743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083_84605159_84605706
ENSMUSG00000023224.13_1	chr2	-	1710	7	ISM	ENSMUSG00000023224.13	ENSMUST00000023994.10	1768	8	594	12	64	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTACAAATAAAACTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	84605154	84595742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_84596172_84597618_84597839_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023224.13_5	chr2	-	1524	7	FSM	ENSMUSG00000023224.13	ENST00000677625.1	1539	7	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGGCTTGGGTAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	84605207	84595918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84596172_84597618_84597776_84600117_84600255_84600436_84600641_84601768_84601904_84603474_84603989_84605083
ENSMUSG00000023232.18_0	chr4	-	1865	10	FSM	ENSMUSG00000023232.18	ENSMUST00000105996.8	1878	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCCCATGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130169366	130147287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130169250
ENSMUSG00000023232.18_1	chr4	-	1868	10	FSM	ENSMUSG00000023232.18	ENSMUST00000122374.8	1881	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTCCCATGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130168998	130147287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130147859_130149148_130149359_130152020_130152157_130152493_130152585_130154435_130154606_130156820_130156959_130157374_130157455_130158053_130158245_130158861_130159024_130168879
ENSMUSG00000023235.15_0	chr8	+	1048	6	FSM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACAGTGATGTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	4399590	4410013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4399656_4399771_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUSG00000023235.15_1	chr8	+	975	5	ISM	ENSMUSG00000023235.15	ENSMUST00000024004.9	1058	6	188	11	188	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACTGACAGTGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4399775	4410009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_4399895_4403882_4404001_4404090_4404204_4407592_4407690_4409481
ENSMUSG00000023236.8_0	chr2	-	1199	6	FSM	ENSMUSG00000023236.8	ENSMUST00000024005.8	1208	6	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTTGGGAAGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	113659461	113606710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113607242_113610978_113611033_113619080_113619194_113622224_113622375_113657683_113657917_113659343
ENSMUSG00000023249.16_0	chr9	-	2928	11	FSM	ENSMUSG00000023249.16	ENSMUST00000067218.14	2962	11	10	24	10	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	106354138	106347544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353691
ENSMUSG00000023249.16_2	chr9	-	2480	11	FSM	ENSMUSG00000023249.16	ENSMUST00000123555.8	2495	11	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTCATTTCTCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	106353568	106347833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351720_106351878_106352068_106352221_106352348_106352997_106353182_106353280
ENSMUSG00000023249.16_4	chr9	-	2012	11	FSM	ENSMUSG00000023249.16	ENSMUST00000112479.9	2030	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCCAAATAACGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	106353856	106348193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106348602_106348958_106349115_106350227_106350406_106350631_106350719_106350879_106351033_106351256_106351484_106351595_106351735_106351878_106352068_106352221_106352348_106352997_106353182_106353691
ENSMUSG00000023259.18_0	chr9	+	2609	20	FSM	ENSMUSG00000023259.18	ENST00000358747.10	2615	20	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTGGGTGCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108732803	108742046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108733142_108733221_108733362_108733530_108733642_108733874_108734024_108734139_108734305_108734390_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUSG00000023259.18_5	chr9	+	2109	18	FSM	ENSMUSG00000023259.18	ENST00000337000.12	2120	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTGGGTGCTGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	108732985	108742046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108733142_108733221_108733362_108733530_108733642_108734394_108734544_108734864_108734948_108735023_108735172_108735395_108735510_108735629_108735708_108736022_108736119_108736199_108736307_108736485_108736556_108737801_108737895_108737996_108738102_108738496_108738601_108739304_108739458_108739626_108739682_108741477_108741615_108741836
ENSMUSG00000023262.14_0	chr9	-	1513	15	FSM	ENSMUSG00000023262.14	ENSMUST00000024031.13	1529	15	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTGTGGACAGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	106315504	106310181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106314000_106314087_106314153_106314827_106314937_106315331
ENSMUSG00000023262.14_5	chr9	-	1225	14	FSM	ENSMUSG00000023262.14	ENST00000476351.5	1238	14	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGGGCTTCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	106315438	106310280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106312813_106312904_106312982_106313060_106313324_106313420_106313894_106313960_106314827_106314933_106315345
ENSMUSG00000023262.14_6	chr9	-	1115	13	FSM	ENSMUSG00000023262.14	ENST00000494103.5	1127	13	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGGGCTTCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	106315439	106310280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894_106314000_106314087_106314153_106314827_106314933_106315345
ENSMUSG00000023262.14_7	chr9	-	1021	12	FSM	ENSMUSG00000023262.14	ENSMUST00000216400.2	1030	12	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGGGCTTCCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	106314932	106310280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106310445_106310560_106310622_106310765_106310846_106311728_106311798_106311883_106312029_106312163_106312214_106312294_106312369_106312666_106312724_106313373_106313420_106313894_106314000_106314087_106314153_106314827
ENSMUSG00000023266.12_0	chr17	+	2139	7	FSM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGAGTGCTCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48006127	48015211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48006198_48008115_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
ENSMUSG00000023266.12_1	chr17	+	2069	6	ISM	ENSMUSG00000023266.12	ENSMUST00000113296.8	2144	7	1993	0	1993	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGAGTGCTCTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48008115	48015211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_48008259_48009497_48009587_48010433_48010621_48012547_48012710_48013494_48013650_48013878
ENSMUSG00000023267.11_0	chr4	+	1910	9	FSM	ENSMUSG00000023267.11	ENSMUST00000108162.8	1933	9	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTCCAGTTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33063014	33095858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33063367_33071349_33071457_33077454_33077523_33081328_33081553_33082278_33082362_33082547_33082689_33084354_33084508_33085545_33085743_33095273
ENSMUSG00000023272.5_0	chr15	+	1348	10	FSM	ENSMUSG00000023272.5	ENSMUST00000024042.5	1366	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGAACAGGACGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88703858	88710878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88704038_88704133_88704217_88704731_88704843_88705337_88705430_88706161_88706339_88707269_88707366_88707944_88708029_88708850_88708947_88709352_88709494_88710589
ENSMUSG00000023272.5_13	chr15	+	483	4	FSM	ENSMUSG00000023272.5	ENST00000403427.3	503	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGCAGAAGGCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	88706173	88709478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88706339_88707269_88707366_88708850_88708947_88709352
ENSMUSG00000023277.14_0	chr9	+	1579	9	FSM	ENSMUSG00000023277.14	ENSMUST00000024047.12	1596	9	10	7	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACTGAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106080316	106092581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106080484_106084087_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_11	chr9	+	1499	8	FSM	ENSMUSG00000023277.14	ENSMUST00000188650.2	1508	8	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACTGAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106084000	106092581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106084166_106088917_106089097_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023277.14_4	chr9	+	1387	8	FSM	ENSMUSG00000023277.14	ENST00000678838.1	1402	8	8	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAATACTGAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	106080329	106092581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106080484_106084087_106084166_106089454_106089551_106089930_106090036_106090136_106090263_106091299_106091451_106091554_106091677_106092026
ENSMUSG00000023284.16_0	chr5	+	3150	5	FSM	ENSMUSG00000023284.16	ENSMUST00000112528.8	3158	5	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCAAGTGTATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110257958	110277653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110258184_110259762_110259933_110271625_110271747_110272218_110272312_110275112
ENSMUSG00000023286.17_0	chr4	+	1296	7	FSM	ENSMUSG00000023286.17	ENSMUST00000103175.8	1309	7	10	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	156028297	156042165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028471_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_14	chr4	+	1424	8	FSM	ENSMUSG00000023286.17	ENSMUST00000105583.9	1434	8	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATACTCTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	156028332	156042165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028471_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_2	chr4	+	3330	7	FSM	ENSMUSG00000023286.17	ENSMUST00000166489.8	3339	7	6	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCCTGCCTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	156028293	156044058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028608_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_21	chr4	+	975	7	FSM	ENSMUSG00000023286.17	ENST00000360466.6	989	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGGGTCACAAGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	156028430	156041817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028631_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_5	chr4	+	1352	7	FSM	ENSMUSG00000023286.17	ENST00000347370.6	1375	7	14	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAAAATATAAAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	156028307	156042139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028471_156033463_156033687_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023286.17_8	chr4	+	3469	8	FSM	ENSMUSG00000023286.17	ENSMUST00000024056.10	3483	8	11	3	-8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATGCCTGCCTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	156028317	156044058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156028608_156030711_156030875_156033463_156033595_156035928_156035970_156039690_156039794_156039878_156040018_156040824_156040906_156041537
ENSMUSG00000023307.15_0	chr19	+	1787	6	FSM	ENSMUSG00000023307.15	ENSMUST00000024078.15	1809	6	16	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTCATAGTGTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37184957	37199544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037_37198205_37198788
ENSMUSG00000023307.15_3	chr19	+	1280	5	FSM	ENSMUSG00000023307.15	ENSMUST00000112391.8	1293	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGCTCATACTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	37184971	37198467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37185304_37188069_37188273_37194581_37194713_37197701_37197886_37198037
ENSMUSG00000023328.15_0	chr5	+	2161	5	FSM	ENSMUSG00000023328.15	ENSMUST00000024099.11	2186	5	19	6	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGTCTGTGCAACACG	NA	NA	NA	NA	NA	NA	NA	NA	137286557	137292722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137286630_137288273_137289364_137289740_137290226_137291429_137291600_137292378
ENSMUSG00000023330.13_0	chr2	+	1335	5	FSM	ENSMUSG00000023330.13	ENSMUST00000170908.8	1342	5	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATACTCGCCCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	125994063	126007192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125994135_125996465_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUSG00000023330.13_3	chr2	+	1265	4	FSM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	4	7	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATACTCGCCCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	125996464	126007192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125996781_126000329_126000474_126001689_126001949_126006646
ENSMUSG00000023330.13_4	chr2	+	610	3	FSM	ENSMUSG00000023330.13	ENST00000251250.7	628	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGGCTAAACCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	126000337	126006863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126000474_126001689_126001949_126006648
ENSMUSG00000023330.13_5	chr2	+	609	3	ISM	ENSMUSG00000023330.13	ENSMUST00000110437.4	1276	4	3880	336	13	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGGCTAAACCGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	126000340	126006863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_126000474_126001689_126001949_126006646
ENSMUSG00000023341.16_0	chr16	+	1723	11	FSM	ENSMUSG00000023341.16	ENST00000424365.6	1735	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTTTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	97345683	97361782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97357801_97357879_97359719_97359969_97361538
ENSMUSG00000023341.16_4	chr16	+	1400	9	FSM	ENSMUSG00000023341.16	ENST00000619682.1	1409	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTGTTTCCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	97345680	97361782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97345861_97346811_97346950_97347524_97347680_97347946_97348086_97348537_97348737_97352096_97352176_97352595_97352719_97353123_97353267_97361538
ENSMUSG00000023345.18_0	chr9	+	2322	11	FSM	ENSMUSG00000023345.18	ENSMUST00000072206.14	2337	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCAGACTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	106158267	106227713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106207071_106207216_106226880
ENSMUSG00000023345.18_2	chr9	+	1319	10	FSM	ENSMUSG00000023345.18	ENST00000394970.6	1338	10	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAATAAATAAAGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	106158461	106227048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106158656_106160050_106160136_106162079_106162252_106162591_106162772_106163978_106164087_106165189_106165306_106172339_106172474_106182463_106182533_106185139_106185233_106226880
ENSMUSG00000023348.12_0	chr5	-	2151	9	FSM	ENSMUSG00000023348.12	ENSMUST00000024119.11	2168	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGATTGGATTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	137312657	137307923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137308437_137308546_137308668_137308914_137309094_137310135_137310306_137310401_137310496_137310967_137311352_137311612_137311739_137311842_137311971_137312221
ENSMUSG00000023353.15_0	chr5	+	3198	18	FSM	ENSMUSG00000023353.15	ENSMUST00000024123.9	3207	18	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTGGTGCCTCAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	24657183	24707045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24701730_24701902_24703067_24703206_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_21	chr5	+	2464	14	ISM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	262	0	262	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24681637	24707035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023353.15_5	chr5	+	1867	8	FSM	ENSMUSG00000023353.15	ENST00000479901.5	1883	8	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAATACTCGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24657211	24688171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24657533_24681375_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24687263
ENSMUSG00000023353.15_9	chr5	+	2530	15	FSM	ENSMUSG00000023353.15	ENST00000463381.5	2530	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTTTCTCCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	24681375	24707035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24681435_24681630_24681719_24681901_24681988_24682066_24682209_24682736_24682872_24683007_24683136_24684628_24684788_24688338_24688432_24692786_24692892_24697955_24698125_24704655_24704811_24704912_24705004_24705120_24705344_24706007_24706264_24706394
ENSMUSG00000023367.15_0	chr6	+	1524	7	FSM	ENSMUSG00000023367.15	ENSMUST00000101426.11	1540	7	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAACTTATGATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	48818450	48822792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48818524_48819137_48819336_48819522_48819634_48820718_48820776_48820894_48821114_48821601_48821713_48822037
ENSMUSG00000023367.15_2	chr6	+	1454	6	ISM	ENSMUSG00000023367.15	ENSMUST00000101426.11	1540	7	689	11	618	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAACTTATGATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	48819134	48822792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_48819336_48819522_48819634_48820718_48820776_48820894_48821114_48821601_48821713_48822037
ENSMUSG00000023391.9_0	chr2	-	2462	3	FSM	ENSMUSG00000023391.9	ENSMUST00000024159.8	2473	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGAGTGTGTGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71377093	71373757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_71375269_71375727_71375913_71376327
ENSMUSG00000023411.13_0	chr14	+	2837	11	FSM	ENSMUSG00000023411.13	ENST00000554591.5	2845	11	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACTAAGGGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	56061155	56071247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56061414_56062465_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_14	chr14	+	2972	10	FSM	ENSMUSG00000023411.13	ENST00000554050.5	3020	10	41	7	-33	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGCCTCAGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	56062218	56071393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56062594_56063614_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_25	chr14	+	2574	9	FSM	ENSMUSG00000023411.13	ENST00000554661.5	2585	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACATGTAGTGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	56063324	56071080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56064711_56066059_56066223_56066821_56067022_56067350_56067524_56067912_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023411.13_30	chr14	+	677	5	FSM	ENSMUSG00000023411.13	ENST00000557767.5	690	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACATGTAGTGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	56067887	56071080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56068054_56069109_56069166_56069404_56069532_56069679_56069941_56071013
ENSMUSG00000023452.20_0	chr5	-	2153	8	FSM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	8	22	8	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAACAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	32942982	32893666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739_32931811_32942892
ENSMUSG00000023452.20_2	chr5	-	2066	7	ISM	ENSMUSG00000023452.20	ENSMUST00000061895.16	2183	8	11178	21	11178	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	32931812	32893665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32922116_32922293_32931739
ENSMUSG00000023452.20_9	chr5	-	2475	9	FSM	ENSMUSG00000023452.20	ENSMUST00000120591.8	2491	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAAATCACTTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	32903646	32893773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_32894799_32895329_32895491_32895731_32895879_32896125_32896265_32896480_32896718_32897967_32898134_32899553_32899820_32902812_32903027_32903526
ENSMUSG00000023456.17_0	chr6	-	1587	7	FSM	ENSMUSG00000023456.17	ENSMUST00000239432.2	1601	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAAAAACCTCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	124791249	124787558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124788351_124788479_124788568_124788844_124788931_124789366_124789500_124789583_124789669_124789752_124789877_124790970
ENSMUSG00000023460.14_0	chr17	-	2001	6	FSM	ENSMUSG00000023460.14	ENSMUST00000167962.2	2010	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACAGTTGAATTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	66826663	66801513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66802799_66804338_66804444_66805013_66805104_66807304_66807444_66813027_66813089_66826342
ENSMUSG00000023473.14_1	chr9	+	11787	35	FSM	ENSMUSG00000023473.14	ENST00000164024.5	11807	35	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAACACTTGTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	108703274	108730158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108707240_108708876_108709528_108709886_108710113_108710363_108710480_108710851_108710941_108711052_108711211_108711747_108711912_108712199_108712326_108712419_108712590_108712984_108713171_108713728_108713846_108714190_108714363_108714515_108714658_108714753_108714875_108715165_108715350_108715662_108715765_108717198_108717294_108717490_108717701_108717953_108718150_108718390_108718547_108718880_108719053_108719691_108719860_108720072_108720200_108720292_108720500_108720742_108720918_108721124_108721238_108721661_108721742_108722243_108722368_108722900_108723018_108723112_108723262_108723518_108723629_108723906_108724066_108724743_108724945_108725794_108726675_108728499
ENSMUSG00000023484.15_0	chr15	+	1431	9	FSM	ENSMUSG00000023484.15	ENST00000257860.9	1451	9	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGCCTCAGCCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	98953076	98956546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956485
ENSMUSG00000023484.15_6	chr15	+	1740	9	FSM	ENSMUSG00000023484.15	ENSMUST00000024249.5	1757	9	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGAGAAACTCCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	98953067	98956843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98953645_98953984_98954046_98954221_98954318_98954649_98954818_98954913_98955040_98955138_98955360_98955448_98955499_98955696_98955777_98956482
ENSMUSG00000023495.14_0	chr9	+	2018	13	FSM	ENSMUSG00000023495.14	ENSMUST00000024260.14	2035	13	9	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAAGCTGTGCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	106331049	106341203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106331207_106337203_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000023495.14_10	chr9	+	1702	11	FSM	ENSMUSG00000023495.14	ENST00000428823.6	1717	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGAAAGCTGTGCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	106337233	106341203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340329
ENSMUSG00000023495.14_8	chr9	+	1597	12	FSM	ENSMUSG00000023495.14	ENST00000471622.5	1611	12	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCTGTTTTTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	106337237	106341170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106337349_106337474_106337499_106337595_106337629_106337849_106337967_106338191_106338324_106338463_106338593_106339047_106339123_106339267_106339313_106339387_106339452_106339560_106339614_106339706_106339877_106340526
ENSMUSG00000023505.14_1	chr6	+	1965	6	FSM	ENSMUSG00000023505.14	ENSMUST00000024270.14	1976	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTTGTCTTGTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	124806661	124810664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124807237_124807465_124807614_124808324_124808452_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023505.14_10	chr6	+	685	4	FSM	ENSMUSG00000023505.14	ENST00000540683.1	705	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGGGCTGTGCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	124807503	124810097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124807614_124808324_124808456_124809108_124809403_124809947
ENSMUSG00000023505.14_9	chr6	+	791	5	FSM	ENSMUSG00000023505.14	ENST00000535406.5	809	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGGGCTGTGCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	124807501	124810097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124807614_124808324_124808456_124809108_124809403_124809528_124809633_124809947
ENSMUSG00000023571.5_0	chr4	+	1301	8	FSM	ENSMUSG00000023571.5	ENSMUST00000024338.5	1315	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGCTCTTGGGTGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	156046782	156051080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156047195_156048999_156049117_156049224_156049346_156049436_156049589_156050050_156050160_156050322_156050414_156050538_156050618_156050860
ENSMUSG00000023572.17_0	chr2	+	1551	11	FSM	ENSMUSG00000023572.17	ENSMUST00000060455.15	1569	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCATTTAATGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120838894	120847378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120839091_120839198_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUSG00000023572.17_6	chr2	+	1616	10	FSM	ENSMUSG00000023572.17	ENSMUST00000099489.9	1632	10	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGTCATTTAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120838934	120847375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120839259_120839523_120839604_120840307_120840390_120841914_120842012_120842163_120842238_120842833_120842911_120843179_120843458_120844438_120844500_120846611_120846659_120846879
ENSMUSG00000023707.14_0	chr5	+	1572	7	FSM	ENSMUSG00000023707.14	ENSMUST00000024470.13	1596	7	15	9	-9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACCCCTCTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	124250374	124253537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252450_124252709_124252777
ENSMUSG00000023707.14_1	chr5	+	1451	7	FSM	ENSMUSG00000023707.14	ENSMUST00000119269.6	1474	7	16	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAACACCCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	124250399	124253532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124250530_124250851_124250909_124251280_124251395_124251491_124251592_124252127_124252256_124252541_124252709_124252777
ENSMUSG00000023723.18_0	chr11	+	1324	5	FSM	ENSMUSG00000023723.18	ENSMUST00000024486.14	1332	5	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTCTCTATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88095220	88102332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88095312_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023723.18_4	chr11	+	1392	5	FSM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	11	1	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTCTCTATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88095247	88102332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88095407_88096014_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023723.18_9	chr11	+	1234	4	ISM	ENSMUSG00000023723.18	ENSMUST00000118784.8	1404	5	777	1	764	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGCTCTCTATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	88096013	88102332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_88096186_88100678_88100757_88100929_88101057_88101475
ENSMUSG00000023755.11_0	chr15	-	1252	8	FSM	ENSMUSG00000023755.11	ENSMUST00000024518.11	1261	8	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGTGTCTGGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	98779353	98775659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98776179_98776333_98776416_98776888_98776937_98777139_98777197_98777285_98777369_98777657_98777726_98778388_98778461_98779030
ENSMUSG00000023764.19_0	chr11	-	3883	32	FSM	ENSMUSG00000023764.19	ENSMUST00000066391.14	3898	32	8	7	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCTACTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3143455	3081887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3082132_3082215_3082328_3082886_3082966_3083071_3083208_3084317_3084502_3084625_3084731_3085282_3085543_3085653_3085831_3085942_3086018_3086624_3086700_3086945_3087107_3090136_3090234_3092307_3092411_3093259_3093337_3094216_3094293_3094791_3094971_3095240_3095323_3096161_3096293_3103431_3103499_3105398_3105497_3106771_3106865_3107865_3107937_3109984_3110147_3114556_3114714_3115575_3115679_3120586_3120705_3127426_3127522_3129396_3129508_3136064_3136137_3137239_3137411_3138940_3139057_3143359
ENSMUSG00000023791.19_0	chr16	-	810	6	FSM	ENSMUSG00000023791.19	ENSMUST00000232321.2	818	6	0	8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31918558	31903241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918472
ENSMUSG00000023791.19_1	chr16	-	973	6	FSM	ENSMUSG00000023791.19	ENSMUST00000189013.8	982	6	3	6	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31918542	31903241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918293
ENSMUSG00000023791.19_4	chr16	-	977	6	FSM	ENSMUSG00000023791.19	ENSMUST00000096109.11	993	6	16	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTAACTGGTTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	31918540	31903241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31903445_31904054_31904156_31906111_31906326_31911161_31911304_31915817_31915882_31918287
ENSMUSG00000023795.17_0	chr17	-	1150	7	FSM	ENSMUSG00000023795.17	ENSMUST00000142526.9	1175	7	24	1	24	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTCTTGGTTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3134333	3126853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_3127058_3127567_3127722_3127962_3128110_3129274_3129414_3129629_3129867_3131143_3131310_3134230
ENSMUSG00000023800.16_102	chr17	+	3135	21	FSM	ENSMUSG00000023800.16	ENST00000528391.6	3151	21	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGATTTGTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3487509	3568994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3487689_3488901_3489049_3489975_3490048_3498652_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568361
ENSMUSG00000023800.16_11	chr17	+	5687	26	FSM	ENSMUSG00000023800.16	ENST00000360366.8	5701	26	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTATCTACTTGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	3464227	3569666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3489975_3490048_3498652_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386_3569261_3569429
ENSMUSG00000023800.16_143	chr17	+	2349	13	FSM	ENSMUSG00000023800.16	ENST00000275246.11	2371	13	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGATTTGTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3532449	3568994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3532891_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023800.16_32	chr17	+	5605	25	FSM	ENSMUSG00000023800.16	ENST00000461783.7	5623	25	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTAAAGTCACGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3464275	3569704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3465461_3471547_3471984_3477402_3477576_3479065_3479291_3487502_3487689_3488901_3489049_3498652_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386_3569261_3569429
ENSMUSG00000023800.16_91	chr17	+	3038	20	FSM	ENSMUSG00000023800.16	ENST00000456877.6	3054	20	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATGATTTGTGTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	3487509	3568994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3487689_3488901_3489049_3498652_3498812_3500506_3500612_3501053_3501133_3503594_3503688_3504362_3504627_3527449_3527554_3553155_3553336_3555982_3556052_3557041_3557168_3557983_3558093_3559675_3559856_3561331_3561451_3563121_3563231_3563665_3563725_3564945_3565052_3566244_3566333_3566837_3566993_3568386
ENSMUSG00000023805.18_1	chr17	+	5640	27	FSM	ENSMUSG00000023805.18	ENSMUST00000115791.10	5664	27	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTCATACTGGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	5991571	6089436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5991853_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6079974_6080110_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ENSMUSG00000023805.18_10	chr17	+	4026	26	FSM	ENSMUSG00000023805.18	ENSMUST00000061091.14	4072	26	37	9	37	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGCCATGCTTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	6025952	6094556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6079974_6080110_6082971_6083085_6084089_6084199_6085685_6085835_6094228
ENSMUSG00000023805.18_13	chr17	+	4797	26	FSM	ENSMUSG00000023805.18	ENSMUST00000115790.8	4808	26	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGAGAGCTGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	6026019	6088824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6079974_6080110_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ENSMUSG00000023805.18_18	chr17	+	2526	11	FSM	ENSMUSG00000023805.18	ENSMUST00000115786.8	2531	11	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTAAGTGTTCTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	6047125	6070830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560
ENSMUSG00000023805.18_8	chr17	+	4786	26	FSM	ENSMUSG00000023805.18	ENSMUST00000080283.13	4793	26	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTGAGAGCTGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	5991678	6088824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5991853_6026069_6026157_6036246_6036518_6040410_6040637_6047152_6047237_6053373_6053436_6055597_6055695_6058212_6058386_6060006_6060089_6060670_6060821_6060934_6061101_6063782_6063975_6066540_6066623_6067761_6067903_6069560_6069754_6072373_6072533_6073933_6074091_6075258_6075377_6076430_6076650_6076751_6076831_6077421_6077591_6078693_6078862_6082971_6083085_6084089_6084199_6085685_6085835_6087658
ENSMUSG00000023806.11_0	chr17	-	2222	8	FSM	ENSMUSG00000023806.11	ENSMUST00000231794.2	2243	8	18	3	18	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTGTCTGACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	7216063	7171814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_7172520_7172831_7172919_7175430_7175594_7177506_7177711_7178676_7178823_7181355_7181498_7209067_7209156_7215376
ENSMUSG00000023806.11_5	chr17	-	808	5	FSM	ENSMUSG00000023806.11	ENST00000449822.5	821	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAAGTTACTCTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	7215648	7172834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_7172919_7175430_7175594_7177506_7177711_7209070_7209156_7215376
ENSMUSG00000023809.11_0	chr17	+	5392	21	FSM	ENSMUSG00000023809.11	ENSMUST00000024575.8	5406	21	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATATTTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	7437519	7570706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_7437843_7495311_7495429_7503444_7503527_7514100_7514182_7516690_7516771_7518938_7519046_7521810_7521849_7523229_7523373_7528402_7528474_7529526_7529616_7538990_7539056_7544861_7544965_7549167_7549299_7550142_7550269_7556313_7556404_7558028_7558188_7560144_7560307_7562601_7562679_7563413_7563532_7566681_7566820_7567614
ENSMUSG00000023826.17_0	chr17	+	853	6	FSM	ENSMUSG00000023826.17	ENST00000366898.6	865	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	965	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGAAAAGCCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	11286024	11854331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_11286180_11456348_11456590_11522476_11522599_11653436_11653521_11711565_11711682_11854196
ENSMUSG00000023827.9_0	chr17	+	1903	9	FSM	ENSMUSG00000023827.9	ENSMUST00000024594.9	1915	9	12	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCAAGTGTTTACACAA	NA	NA	NA	NA	NA	NA	NA	NA	12338182	12438532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871
ENSMUSG00000023827.9_14	chr17	+	1518	8	FSM	ENSMUSG00000023827.9	ENST00000366911.9	1529	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTTTACACAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	12370587	12438537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_12370837_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023827.9_2	chr17	+	1810	10	FSM	ENSMUSG00000023827.9	ENST00000320285.9	1821	10	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTTTACACAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	12338189	12438537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_12338303_12370578_12370837_12417638_12417809_12429097_12429260_12429525_12429680_12432341_12432445_12434162_12434239_12435580_12435780_12437871_12438212_12438302
ENSMUSG00000023829.10_0	chr17	-	1418	9	FSM	ENSMUSG00000023829.10	ENST00000457470.6	1433	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACAGGCAAATCCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	12894536	12867931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_12867972_12875824_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511_12885667_12886113_12886218_12894132
ENSMUSG00000023829.10_1	chr17	-	1512	10	FSM	ENSMUSG00000023829.10	ENST00000324965.8	1525	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAGGTCCAAACAGGC	NA	NA	NA	NA	NA	NA	NA	NA	12894538	12867942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_12867972_12869755_12869859_12875824_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511_12885667_12886113_12886218_12894132
ENSMUSG00000023829.10_5	chr17	-	1471	9	ISM	ENSMUSG00000023829.10	ENST00000324965.8	1525	10	21	1817	21	-1817	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACAGTGGTGCGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	12894525	12869754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_12869859_12875824_12875934_12878432_12878648_12881423_12881531_12881650_12881766_12883276_12883446_12885511_12885667_12886113_12886218_12894132
ENSMUSG00000023830.15_0	chr17	-	8856	48	FSM	ENSMUSG00000023830.15	ENSMUST00000024599.14	8887	48	24	7	24	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGGTGTAAGTGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	12988527	12901299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_12903014_12904024_12904095_12904477_12904622_12905508_12905696_12907202_12907391_12907876_12908024_12909018_12909134_12910043_12910181_12910769_12911005_12911525_12911673_12911960_12912169_12912889_12913052_12914172_12914323_12916211_12916431_12916972_12917230_12917411_12917532_12918066_12918194_12919228_12919420_12920106_12920244_12920819_12920918_12921083_12921215_12922247_12922464_12923158_12923247_12923519_12923696_12923783_12923928_12924574_12924740_12928265_12928462_12929523_12929629_12930905_12931008_12932847_12933028_12933759_12933929_12934264_12934381_12934759_12934935_12935455_12935604_12936159_12936298_12937538_12937683_12938699_12938838_12941014_12941180_12944201_12944306_12945076_12945243_12945557_12945721_12950294_12950401_12952683_12952814_12954853_12954987_12958173_12958273_12959168_12959294_12967530_12967671_12988286
ENSMUSG00000023832.15_0	chr17	-	2236	9	FSM	ENSMUSG00000023832.15	ENSMUST00000007005.14	2250	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAACCTGCTGGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	13179625	13161781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13162920_13163286_13163398_13165147_13165303_13166243_13166367_13167400_13167545_13171138_13171257_13175105_13175288_13178881_13179017_13179495
ENSMUSG00000023845.8_0	chr17	-	12028	18	FSM	ENSMUSG00000023845.8	ENSMUST00000041047.4	12052	18	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAATACAAATATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	17845298	17741684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_17750143_17750738_17750821_17751399_17751541_17757175_17757338_17758781_17758967_17765072_17765230_17766645_17766830_17773131_17773221_17773423_17773585_17783014_17783147_17786944_17787077_17788582_17788697_17791135_17791291_17791887_17792009_17794208_17794341_17795510_17795650_17798793_17799635_17844655
ENSMUSG00000023852.15_0	chr17	+	7906	36	FSM	ENSMUSG00000023852.15	ENSMUST00000024627.14	7916	36	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAAGCAATGGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	15925231	15992865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583_15972761_15975182_15975344_15977021_15977064_15977878_15978010_15978536_15978676_15978843_15978995_15980589_15980713_15981540_15981670_15982643_15982785_15985104_15985284_15986592_15986690_15987711_15987767_15988827_15989039_15990239
ENSMUSG00000023852.15_3	chr17	+	4194	23	FSM	ENSMUSG00000023852.15	ENSMUST00000173311.8	4211	23	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCAAAAGCTTAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	15925243	15973245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15925575_15927201_15927402_15945530_15945733_15946510_15946625_15948448_15948514_15950744_15950895_15951010_15951280_15952115_15952342_15952800_15952902_15953246_15953426_15954492_15954621_15955889_15956107_15957121_15957212_15958743_15958935_15959767_15959957_15962418_15962582_15963339_15963493_15967396_15967469_15968029_15968180_15969634_15969784_15970109_15970207_15970300_15970397_15972583
ENSMUSG00000023861.18_0	chr17	+	933	4	FSM	ENSMUSG00000023861.18	ENST00000621630.1	833	4	-100	0	-15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGAGTGTGACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	8502612	8516491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8502794_8515366_8515464_8515655_8515789_8515969
ENSMUSG00000023868.18_0	chr17	+	7747	22	FSM	ENSMUSG00000023868.18	ENSMUST00000089085.10	7769	22	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCATCTCTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	9020537	9205471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_9020978_9117692_9117822_9139335_9139365_9147923_9148045_9149341_9149392_9159972_9160114_9161703_9161860_9163201_9163253_9163767_9163827_9165627_9165680_9168181_9168325_9170328_9170422_9172568_9172756_9180691_9180835_9181719_9181804_9183396_9183548_9186250_9186407_9188359_9188533_9193554_9193667_9195967_9196049_9197736_9197826_9200364
ENSMUSG00000023882.16_0	chr17	+	2816	5	FSM	ENSMUSG00000023882.16	ENSMUST00000165230.8	2832	5	7	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAAGCTTTGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	21643495	21655893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21643824_21647593_21647634_21647998_21648091_21650456_21650584_21653664
ENSMUSG00000023882.16_1	chr17	+	2276	4	FSM	ENSMUSG00000023882.16	ENSMUST00000007884.15	2300	4	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATGAAAACCGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21643510	21655408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21643824_21647998_21648091_21650456_21650584_21653664
ENSMUSG00000023883.14_0	chr17	-	1651	12	FSM	ENSMUSG00000023883.14	ENSMUST00000024657.12	1663	12	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACGATGACCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	15181528	15165275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15165447_15166460_15166650_15166916_15167026_15170821_15170978_15172881_15173036_15174276_15174387_15175053_15175204_15175294_15175429_15176245_15176330_15176995_15177127_15179680_15179788_15181372
ENSMUSG00000023885.10_0	chr17	-	4046	21	FSM	ENSMUSG00000023885.10	ENST00000676498.1	4061	21	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTTTCTGTAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	14910537	14885774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14885885_14887297_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_12	chr17	-	5884	22	FSM	ENSMUSG00000023885.10	ENSMUST00000170872.3	5895	22	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATGAATCTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	14914486	14885761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988_14910546_14911624_14911774_14914231
ENSMUSG00000023885.10_22	chr17	-	3874	20	FSM	ENSMUSG00000023885.10	ENST00000676628.1	3892	20	8	10	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTTTCTGTAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	14910539	14885774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14885885_14887297_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14901500_14901678_14901926_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023885.10_26	chr17	-	4054	21	FSM	ENSMUSG00000023885.10	ENST00000649844.1	4079	21	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTATAAAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	14910538	14885785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14885885_14887297_14887783_14888986_14889127_14890233_14890332_14890855_14891128_14891534_14891763_14893405_14893641_14894307_14894427_14896468_14896629_14897247_14897356_14898947_14899167_14899943_14900097_14900172_14900301_14900554_14900729_14901500_14901678_14901908_14902098_14903550_14903648_14904333_14904475_14906007_14906205_14908067_14908153_14909988
ENSMUSG00000023886.11_0	chr17	+	2815	13	FSM	ENSMUSG00000023886.11	ENSMUST00000024660.9	2832	13	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTTCATAAAAGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	14499781	14625049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_14500062_14545796_14545969_14556808_14556916_14557923_14558024_14564588_14564637_14567468_14567520_14568965_14569041_14589169_14589357_14595698_14595782_14617782_14617886_14619632_14619908_14621803_14621845_14623756
ENSMUSG00000023886.11_4	chr17	+	2809	13	FSM	ENSMUSG00000023886.11	ENSMUST00000233344.2	2817	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTGTGAGTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	14499798	14625027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_14500062_14545796_14545969_14556808_14556916_14557923_14558024_14564588_14564637_14567435_14567520_14568965_14569041_14589169_14589357_14595698_14595782_14617782_14617886_14619632_14619908_14621803_14621845_14623756
ENSMUSG00000023892.9_0	chr17	+	2568	5	FSM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCAAAAGCTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21670635	21685843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21670684_21672698_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUSG00000023892.9_5	chr17	+	2518	4	ISM	ENSMUSG00000023892.9	ENSMUST00000039577.8	2574	5	2066	5	2066	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAAAAGCTTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21672701	21685844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_21672790_21676558_21676651_21681922_21682050_21683633
ENSMUSG00000023904.11_0	chr17	+	927	3	FSM	ENSMUSG00000023904.11	ENSMUST00000024697.5	946	3	12	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGATTTCTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	23892593	23894194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_23893043_23893508_23893650_23893857
ENSMUSG00000023904.11_1	chr17	+	680	4	FSM	ENSMUSG00000023904.11	ENSMUST00000180140.8	693	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAGATTTCTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	23892575	23894194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_23892678_23892942_23893043_23893508_23893650_23893857
ENSMUSG00000023905.16_0	chr17	-	966	4	FSM	ENSMUSG00000023905.16	ENSMUST00000024698.10	984	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAGATATGGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	23896432	23894426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23895021_23895112_23895248_23895492_23895598_23896300
ENSMUSG00000023908.9_0	chr17	+	2026	8	FSM	ENSMUSG00000023908.9	ENSMUST00000024701.9	2040	8	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATAGCTCTTCTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	23945322	23955703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_23945616_23951310_23951799_23952796_23953291_23953939_23954047_23954173_23954347_23954536_23954695_23955297_23955376_23955468
ENSMUSG00000023909.5_0	chr17	-	2557	3	FSM	ENSMUSG00000023909.5	ENSMUST00000024702.5	2575	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTTCTCCCGCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	23959362	23955167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23956974_23957113_23957336_23958833
ENSMUSG00000023911.13_0	chr17	-	688	3	FSM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGGTAGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24005053	23995893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23996074_23998601_23999031_24004974
ENSMUSG00000023911.13_1	chr17	-	600	2	ISM	ENSMUSG00000023911.13	ENSMUST00000024704.10	694	3	6034	4	6034	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGGTAGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	23999021	23995893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_23996074_23998601
ENSMUSG00000023912.11_0	chr17	-	2874	9	FSM	ENSMUSG00000023912.11	ENSMUST00000024705.6	2895	9	4	17	4	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTATTGAAAAAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	43978101	43952798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_43954568_43957911_43958015_43958582_43958676_43960515_43960601_43964252_43964366_43968572_43968696_43972504_43972590_43974964_43975157_43977790
ENSMUSG00000023913.18_0	chr17	+	2076	12	FSM	ENSMUSG00000023913.18	ENSMUST00000024706.12	2097	12	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATACAAAAATGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	43879165	43923077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43879678_43899454_43899595_43905179_43905302_43905669_43905815_43907793_43907888_43909964_43910034_43911385_43911510_43913718_43913833_43915447_43915540_43918125_43918297_43922159_43922309_43922733
ENSMUSG00000023915.6_0	chr17	+	3606	6	FSM	ENSMUSG00000023915.6	ENSMUST00000024708.6	3627	6	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGGTTTTGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	43327465	43400079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43327984_43348485_43349138_43350585_43351081_43375858_43376125_43396226_43396456_43398633
ENSMUSG00000023918.13_0	chr17	-	2126	7	FSM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGGTAAGGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	43003044	42974276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_42974330_42974769_42974812_42977394_42978778_42980519_42980717_42983329_42983539_42987501_42987656_43002956
ENSMUSG00000023918.13_1	chr17	-	2038	6	ISM	ENSMUSG00000023918.13	ENST00000283303.3	2140	7	15396	7	15396	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGGTAAGGTCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	42987655	42974276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_42974330_42974769_42974812_42977394_42978778_42980519_42980717_42983329_42983539_42987501
ENSMUSG00000023919.9_0	chr17	-	1885	9	FSM	ENSMUSG00000023919.9	ENSMUST00000087114.5	1942	9	49	8	49	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGTTTCTGATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	41245889	41233949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_41234508_41235179_41235258_41235392_41235513_41238029_41238160_41240904_41240971_41242540_41242668_41243686_41243742_41243971_41244107_41245273
ENSMUSG00000023921.10_0	chr17	+	3661	13	FSM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACGATGTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	41245580	41272871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_41245671_41247934_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023921.10_8	chr17	+	3571	12	ISM	ENSMUSG00000023921.10	ENSMUST00000169611.4	3674	13	2359	8	2359	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACGATGTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	41247934	41272871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_41248354_41249405_41249774_41252206_41252365_41254697_41254870_41257912_41258162_41262645_41262758_41263669_41263786_41265992_41266109_41267097_41267230_41269220_41269369_41269592_41269761_41271458
ENSMUSG00000023923.11_0	chr17	-	5427	22	FSM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGATCACATCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	51486196	51040159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ENSMUSG00000023923.11_2	chr17	-	5356	21	ISM	ENSMUSG00000023923.11	ENSMUST00000024717.10	5435	22	35749	8	35749	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGGATCACATCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	51450447	51040159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386
ENSMUSG00000023923.11_5	chr17	-	4749	23	FSM	ENSMUSG00000023923.11	ENSMUST00000224528.2	4764	23	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACATGGTAATCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	51486330	51041037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_51043273_51048503_51048648_51049084_51049165_51063654_51063755_51089288_51089453_51102953_51103020_51106894_51107224_51120783_51120870_51159560_51159668_51181593_51181737_51224554_51224728_51226019_51226090_51226189_51226241_51227542_51227632_51242483_51242587_51270720_51270789_51273579_51273655_51273743_51273834_51275217_51275327_51291632_51291703_51332101_51332233_51450386_51450450_51486127
ENSMUSG00000023927.16_0	chr17	-	3735	11	FSM	ENSMUSG00000023927.16	ENST00000454909.6	3748	11	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGGCAGGGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	52133645	52045688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_52047436_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52133461
ENSMUSG00000023927.16_1	chr17	-	4551	12	FSM	ENSMUSG00000023927.16	ENST00000417717.6	4563	12	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATGGCAGGGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	52119699	52045688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_52047436_52049074_52049171_52049673_52049878_52074919_52075076_52082233_52082447_52089639_52090095_52092556_52092669_52110458_52110583_52111341_52111469_52112224_52112402_52116070_52116307_52118795
ENSMUSG00000023932.10_0	chr17	-	3009	16	FSM	ENSMUSG00000023932.10	ENSMUST00000024727.10	3027	16	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTGAGTGTAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45744653	45702817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45703231_45703918_45704132_45715519_45715718_45718721_45718965_45719261_45719343_45721699_45721865_45722753_45722917_45724047_45724197_45726478_45726668_45727870_45728016_45730526_45730746_45735426_45735527_45736777_45736906_45737445_45737608_45738864_45738969_45744316
ENSMUSG00000023935.11_0	chr17	-	940	7	ISM	ENSMUSG00000023935.11	ENSMUST00000233553.2	997	8	10258	17	10258	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGCCTTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45775494	45756822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_45757010_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352
ENSMUSG00000023935.11_1	chr17	-	978	8	FSM	ENSMUSG00000023935.11	ENSMUST00000233553.2	997	8	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAAAAGCCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	45785752	45756824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45757010_45760360_45760477_45763603_45763667_45765016_45765138_45768083_45768246_45772087_45772237_45775352_45775507_45785724
ENSMUSG00000023938.9_0	chr17	+	3337	22	FSM	ENSMUSG00000023938.9	ENSMUST00000024733.9	3349	22	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45817777	45831768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45818008_45818444_45818637_45819406_45819553_45819790_45819959_45820321_45820467_45825417_45825564_45825710_45825820_45826170_45826210_45826325_45826438_45826870_45827005_45827378_45827524_45827746_45827920_45828027_45828142_45828238_45828380_45828618_45828757_45828837_45828948_45829075_45829185_45829463_45829587_45829780_45829892_45830438_45830523_45830629_45830741_45831211
ENSMUSG00000023939.8_0	chr17	+	634	3	FSM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	45997257	46009420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45997354_46006407_46006499_46008973
ENSMUSG00000023939.8_2	chr17	+	539	2	ISM	ENSMUSG00000023939.8	ENSMUST00000024734.8	645	3	9159	1	9159	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTGAGCTGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	46006406	46009420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_46006499_46008973
ENSMUSG00000023940.15_0	chr17	-	3608	9	FSM	ENSMUSG00000023940.15	ENSMUST00000024736.14	3628	9	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATAGTCAGTTGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	53996348	53981820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_53983740_53983934_53984125_53985937_53986730_53988472_53988517_53990581_53990659_53994111_53994309_53994738_53994887_53995017_53995149_53996238
ENSMUSG00000023942.16_0	chr17	-	2147	12	FSM	ENSMUSG00000023942.16	ENSMUST00000163492.8	2216	12	66	3	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45903435	45896128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104
ENSMUSG00000023942.16_2	chr17	-	1983	13	FSM	ENSMUSG00000023942.16	ENSMUST00000064889.13	1988	13	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45906491	45896128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899927_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUSG00000023942.16_3	chr17	-	1992	13	FSM	ENSMUSG00000023942.16	ENSMUST00000051574.13	1996	13	4	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45906494	45896128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45906407
ENSMUSG00000023942.16_4	chr17	-	2086	14	FSM	ENSMUSG00000023942.16	ENSMUST00000167692.8	2092	14	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45904561	45896128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257_45904359_45904481
ENSMUSG00000023942.16_5	chr17	-	2007	13	ISM	ENSMUSG00000023942.16	ENSMUST00000167692.8	2092	14	207	1	207	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCTGTGCATCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45904359	45896128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_45896709_45897019_45897232_45898153_45898240_45898487_45898597_45899214_45899313_45899921_45900001_45900133_45900232_45900339_45900475_45900606_45900747_45900848_45901052_45901182_45901265_45903104_45903188_45904257
ENSMUSG00000023943.8_0	chr17	-	511	4	FSM	ENSMUSG00000023943.8	ENST00000681802.2	525	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGTAGGGTAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	54271778	54269100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_54269213_54269424_54269606_54271008_54271104_54271655
ENSMUSG00000023944.15_0	chr17	-	2508	11	FSM	ENSMUSG00000023944.15	ENSMUST00000024739.14	2520	11	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	22778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45884189	45878704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45884092
ENSMUSG00000023944.15_2	chr17	-	2598	11	FSM	ENSMUSG00000023944.15	ENST00000371554.2	2613	11	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45883494	45878704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690_45882838_45883307
ENSMUSG00000023944.15_3	chr17	-	2413	10	ISM	ENSMUSG00000023944.15	ENST00000371554.2	2613	11	665	5	-74	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACAGTCCTGCTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45882839	45878704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_45879051_45879154_45879489_45879783_45880053_45880165_45880314_45880395_45880753_45881183_45881493_45881591_45881726_45881943_45882104_45882338_45882546_45882690
ENSMUSG00000023947.9_0	chr17	+	2409	6	FSM	ENSMUSG00000023947.9	ENSMUST00000024742.9	2435	6	13	13	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAACTAAATATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45866641	45874082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927
ENSMUSG00000023947.9_1	chr17	+	1842	7	FSM	ENSMUSG00000023947.9	ENST00000619360.6	1859	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTCATGCACGAAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	45866874	45873975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45867241_45869420_45869524_45870133_45870357_45871049_45871139_45871333_45871574_45872927_45873331_45873557
ENSMUSG00000023951.19_0	chr17	-	2749	6	FSM	ENSMUSG00000023951.19	ENSMUST00000024747.14	2765	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	46342733	46327926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46329806_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUSG00000023951.19_1	chr17	-	3428	7	FSM	ENSMUSG00000023951.19	ENSMUST00000071648.12	3451	7	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAAAGCTCTCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	46343280	46327926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46329806_46331916_46332049_46334990_46335021_46335369_46335447_46336272_46336470_46339276_46339326_46342216
ENSMUSG00000023952.14_0	chr17	+	2954	12	FSM	ENSMUSG00000023952.14	ENSMUST00000024748.14	2966	12	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGACACTCTGCTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	46471961	46480288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46472253_46474408_46474436_46475119_46475305_46475650_46475760_46475911_46476110_46476380_46476556_46476703_46476924_46477236_46477373_46477517_46477577_46478148_46478321_46478651_46478817_46479071
ENSMUSG00000023953.10_0	chr17	-	3229	11	FSM	ENSMUSG00000023953.10	ENSMUST00000024749.9	3238	11	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGGCTTGCATACTTT	NA	NA	NA	NA	NA	NA	NA	NA	46513563	46482281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46484023_46486076_46486247_46492391_46492458_46493610_46493735_46495615_46495736_46498952_46499057_46501532_46501703_46505127_46505343_46509559_46509695_46510317_46510461_46513322
ENSMUSG00000023959.11_0	chr17	+	984	6	FSM	ENSMUSG00000023959.11	ENST00000644878.1	1002	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTAAGCCAGCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44499739	44611314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44499849_44548019_44548130_44552920_44553047_44559606_44559714_44581377_44581560_44610964
ENSMUSG00000023960.14_0	chr17	+	2470	4	FSM	ENSMUSG00000023960.14	ENSMUST00000154166.8	2490	4	6	14	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTAAAAAAAATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44389709	44397444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44389790_44391537_44392402_44393634_44393812_44396095
ENSMUSG00000023960.14_1	chr17	+	2526	4	FSM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTAAAAAAAATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44389737	44397444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44389874_44391537_44392402_44393634_44393812_44396095
ENSMUSG00000023960.14_2	chr17	+	2393	3	ISM	ENSMUSG00000023960.14	ENSMUST00000024756.5	2534	4	1799	6	1799	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTAAAAAAAATAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44391534	44397444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_44392402_44393634_44393812_44396095
ENSMUSG00000023961.17_0	chr17	-	4540	4	FSM	ENSMUSG00000023961.17	ENSMUST00000024757.14	4560	4	8	12	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAAACAAATATATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44416692	44407210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416539
ENSMUSG00000023961.17_1	chr17	-	4381	3	ISM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	3106	4	3106	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAAACAAATATATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44413549	44407210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_44410569_44412201_44412373_44412697
ENSMUSG00000023961.17_2	chr17	-	4441	4	FSM	ENSMUSG00000023961.17	ENSMUST00000143137.2	4445	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAAACAAATATATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	44416655	44407210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_44410569_44412201_44412373_44412697_44413556_44416601
ENSMUSG00000023963.11_0	chr17	+	3036	12	FSM	ENSMUSG00000023963.11	ENSMUST00000170988.2	3053	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCACAGGCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	43978325	44062315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43978686_43987721_43987858_43991014_43991190_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023963.11_3	chr17	+	2209	11	FSM	ENSMUSG00000023963.11	ENSMUST00000233437.2	2227	11	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGATAAAATAAATGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	43978419	44061732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43978686_43987721_43987858_43991014_43991190_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023963.11_4	chr17	+	1462	11	FSM	ENSMUSG00000023963.11	ENST00000619708.4	1481	11	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATACATAAAAAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	43978583	44061174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43978686_43987721_43987858_43993838_43993989_43996076_43996168_44002524_44002630_44012367_44012459_44036405_44036540_44041862_44041959_44042815_44042905_44057415_44057504_44060794
ENSMUSG00000023965.14_0	chr17	-	4921	9	FSM	ENSMUSG00000023965.14	ENSMUST00000024761.13	4925	9	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAACAAATAATTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	63807012	63364450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63806019
ENSMUSG00000023965.14_1	chr17	-	3640	9	FSM	ENSMUSG00000023965.14	ENSMUST00000112840.2	3667	9	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTAACAGTCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	63799727	63364782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759_63797883_63799683
ENSMUSG00000023965.14_2	chr17	-	3574	8	ISM	ENSMUSG00000023965.14	ENSMUST00000112840.2	3667	9	1888	6	1888	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTAACAGTCTCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	63797860	63364782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_63367407_63387415_63387559_63532019_63532097_63663742_63663874_63691939_63692048_63778402_63778535_63794706_63794965_63797759
ENSMUSG00000023966.9_0	chr17	-	943	5	FSM	ENSMUSG00000023966.9	ENSMUST00000024762.3	966	5	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTGATTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	46455119	46440196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46440425_46445898_46446046_46447667_46447798_46452472_46452639_46454847
ENSMUSG00000023967.10_0	chr17	+	874	6	FSM	ENSMUSG00000023967.10	ENSMUST00000024763.10	884	6	10	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGGTCAGTGCTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	46421921	46439836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46422056_46428865_46428898_46433649_46433758_46436215_46436340_46436568_46436639_46439430
ENSMUSG00000023971.10_0	chr17	-	1266	7	FSM	ENSMUSG00000023971.10	ENSMUST00000233136.2	1289	7	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGCATTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46985260	46978391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631_46983774_46985122
ENSMUSG00000023971.10_2	chr17	-	1120	6	ISM	ENSMUSG00000023971.10	ENSMUST00000024766.7	1195	7	1416	8	1416	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGCATTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46983765	46978391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46979013_46980830_46980949_46981036_46981112_46983261_46983367_46983450_46983518_46983631
ENSMUSG00000023972.11_0	chr17	-	4225	20	FSM	ENSMUSG00000023972.11	ENSMUST00000044442.10	4235	20	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCCTGTTTGTTAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	46940423	46875399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46876422_46877028_46877208_46878850_46879003_46882528_46882610_46883447_46883681_46884345_46884502_46885197_46885402_46887189_46887318_46887417_46887569_46887686_46887837_46889975_46890096_46890218_46890355_46890492_46890627_46897126_46897394_46897639_46897789_46900937_46901089_46901186_46901378_46901684_46901788_46902440_46902729_46940193
ENSMUSG00000023973.14_0	chr17	-	1887	6	FSM	ENSMUSG00000023973.14	ENSMUST00000059844.13	1908	6	11	10	-8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAGAAGTTTGCCAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47063129	47046640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47047835_47048100_47048219_47048652_47048776_47054111_47054209_47058346_47058471_47062898
ENSMUSG00000023977.16_0	chr17	-	7621	47	FSM	ENSMUSG00000023977.16	ENSMUST00000113337.10	7633	47	9	3	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAGTTTTGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	47321437	47239223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259578_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023977.16_24	chr17	-	5708	47	FSM	ENSMUSG00000023977.16	ENST00000372901.2	5728	47	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTGTCCCTTAGACG	NA	NA	NA	NA	NA	NA	NA	NA	47321419	47241101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291245_47291345_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023977.16_9	chr17	-	5712	47	FSM	ENSMUSG00000023977.16	ENST00000372899.6	5728	47	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGTGTCCCTTAGACG	NA	NA	NA	NA	NA	NA	NA	NA	47321423	47241101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47241427_47243378_47243481_47245000_47245172_47246359_47246438_47249575_47249633_47250227_47250337_47251929_47252061_47253645_47253737_47254262_47254399_47255433_47255502_47255716_47255814_47255971_47256028_47256943_47257093_47259498_47259561_47262807_47262912_47264823_47264986_47265795_47265890_47266707_47266908_47267483_47267663_47268039_47268121_47268230_47268341_47270389_47270493_47272424_47272580_47274072_47274122_47274613_47274717_47275682_47275736_47277066_47277192_47277957_47278022_47278115_47278239_47279309_47279376_47280116_47280228_47281026_47281089_47283789_47283974_47284842_47284972_47286665_47286766_47286852_47287017_47291414_47291514_47292279_47292369_47293191_47293300_47294146_47294268_47296914_47296978_47297570_47297710_47299578_47299710_47301917_47302032_47303916_47303996_47311511_47311772_47321067
ENSMUSG00000023980.8_2	chr17	-	2774	9	FSM	ENSMUSG00000023980.8	ENSMUST00000067103.4	2784	9	3	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTTATGTGTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	47813214	47798981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47800822_47801067_47801208_47804486_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208_47812366_47813155
ENSMUSG00000023980.8_7	chr17	-	975	7	FSM	ENSMUSG00000023980.8	ENST00000372982.8	994	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGAAGTGAGTGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	47812356	47801075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47801208_47804369_47804630_47805266_47805415_47807502_47807628_47809102_47809166_47809464_47809564_47812208
ENSMUSG00000023984.18_0	chr17	+	4778	9	FSM	ENSMUSG00000023984.18	ENSMUST00000132397.2	4807	9	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGGTTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	47922566	47994786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606_47993788_47994544
ENSMUSG00000023988.9_0	chr17	-	3837	7	FSM	ENSMUSG00000023988.9	ENSMUST00000024783.9	3854	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGCACCCTTAAGACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	47922405	47910260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47912824_47913316_47913420_47913562_47913724_47914780_47914915_47915179_47915319_47917763_47917927_47921831
ENSMUSG00000023990.19_0	chr17	+	2327	9	FSM	ENSMUSG00000023990.19	ENSMUST00000086932.10	2342	9	11	4	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48047965	48103340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48048242_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023990.19_1	chr17	+	2323	9	FSM	ENSMUSG00000023990.19	ENST00000419574.6	2329	9	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGTTGTCCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48080172	48103340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48080445_48096889_48097122_48097202_48097458_48097855_48097937_48098950_48099072_48099161_48099219_48099833_48099910_48100585_48100734_48102259
ENSMUSG00000023993.8_0	chr17	+	867	5	FSM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGTAAATAAGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	48666955	48673931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48667011_48667162_48667496_48671916_48672026_48672535_48672622_48673647
ENSMUSG00000023993.8_1	chr17	+	919	6	FSM	ENSMUSG00000023993.8	ENST00000426005.6	927	6	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGTAAATAAGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	48666956	48673931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48667011_48667162_48667496_48671916_48672026_48672535_48672622_48673023_48673077_48673647
ENSMUSG00000023993.8_2	chr17	+	809	4	ISM	ENSMUSG00000023993.8	ENST00000373127.8	874	5	211	6	211	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGTAAATAAGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	48667165	48673931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673647
ENSMUSG00000023993.8_3	chr17	+	863	5	ISM	ENSMUSG00000023993.8	ENST00000426005.6	927	6	210	6	210	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGTAAATAAGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	48667164	48673931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_48667496_48671916_48672026_48672535_48672622_48673023_48673077_48673647
ENSMUSG00000023999.15_0	chr17	+	3500	23	FSM	ENSMUSG00000023999.15	ENSMUST00000162854.2	3528	23	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTCTTGGTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	49922220	50216868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_49922331_49927620_49927731_49931479_49931555_49978060_49978209_49982304_49982415_49993418_49993549_50014537_50014745_50021022_50021167_50022091_50022179_50029268_50029373_50060849_50060956_50062128_50062265_50065449_50065666_50139168_50139278_50146179_50146236_50177921_50177973_50197031_50197117_50198717_50198854_50202827_50202911_50208279_50208328_50208788_50208879_50210603_50210699_50215804
ENSMUSG00000024002.19_0	chr17	-	5955	20	FSM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32503071	32415249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32471970_32472175_32503036
ENSMUSG00000024002.19_1	chr17	-	5911	19	ISM	ENSMUSG00000024002.19	ENSMUST00000003726.16	5957	20	30906	2	30906	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32472165	32415249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443057_32443197_32444549_32444688_32448390_32448710_32471970
ENSMUSG00000024002.19_15	chr17	-	4425	12	ISM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	30917	6	30905	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCATCTCCATGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	32472166	32423889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014
ENSMUSG00000024002.19_16	chr17	-	4480	13	FSM	ENSMUSG00000024002.19	ENSMUST00000120276.9	4486	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCATCTCCATGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	32503083	32423889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32425968_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUSG00000024002.19_2	chr17	-	5920	20	FSM	ENSMUSG00000024002.19	ENSMUST00000121285.8	5922	20	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32503083	32415249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014_32472175_32503036
ENSMUSG00000024002.19_27	chr17	-	2391	11	FSM	ENSMUSG00000024002.19	ENST00000360016.9	2406	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTTAGCTGATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	32503693	32430146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32503491
ENSMUSG00000024002.19_3	chr17	-	5861	19	ISM	ENSMUSG00000024002.19	ENSMUST00000121285.8	5922	20	30921	2	30909	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCTGTCTCCCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	32472162	32415249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32416795_32417004_32417249_32417330_32417537_32417656_32417788_32417869_32418245_32419975_32420567_32421147_32421521_32421641_32421695_32430140_32430252_32431812_32432109_32432500_32432701_32433604_32433815_32439134_32439264_32440119_32440483_32440846_32441140_32443060_32443197_32444549_32444688_32448390_32448710_32472014
ENSMUSG00000024006.18_0	chr17	-	3326	14	FSM	ENSMUSG00000024006.18	ENSMUST00000009138.13	3351	14	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAATCGAACTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29226956	29189865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219116_29226684
ENSMUSG00000024006.18_1	chr17	-	3334	14	FSM	ENSMUSG00000024006.18	ENSMUST00000119274.3	3354	14	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGATAATCGAACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29226963	29189867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982_29219119_29226684
ENSMUSG00000024006.18_3	chr17	-	2767	13	FSM	ENSMUSG00000024006.18	ENSMUST00000232836.2	2778	13	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAGTGCCCACAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	29219662	29190699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29191651_29192018_29192114_29193255_29193352_29193519_29193644_29194792_29194911_29196513_29196576_29198176_29198280_29201005_29201161_29203050_29203175_29207151_29207236_29210271_29210395_29211390_29211443_29218982
ENSMUSG00000024007.16_0	chr17	-	1448	4	FSM	ENSMUSG00000024007.16	ENSMUST00000024802.10	1462	4	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTCGGCCTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29483149	29469779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29470700_29471223_29471293_29480710_29480866_29482845
ENSMUSG00000024011.18_0	chr17	+	3983	7	FSM	ENSMUSG00000024011.18	ENSMUST00000114701.10	3994	7	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGTTGACTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	29537802	29549561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29538366_29541159_29541382_29544846_29544957_29545247_29545337_29545821_29546608_29546811_29546945_29547481
ENSMUSG00000024012.19_0	chr17	-	1937	12	FSM	ENSMUSG00000024012.19	ENSMUST00000095427.12	1952	12	10	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTGTGCAAGCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	29566898	29551050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUSG00000024012.19_19	chr17	-	688	10	ISM	ENSMUSG00000024012.19	ENST00000405630.1	746	11	1979	4	1979	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCCCTGGAGTAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	29559863	29551696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764
ENSMUSG00000024012.19_20	chr17	-	746	11	FSM	ENSMUSG00000024012.19	ENST00000405630.1	746	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGGAGTAACCTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	29561842	29551692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552975_29555187_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796
ENSMUSG00000024012.19_3	chr17	-	1635	12	FSM	ENSMUSG00000024012.19	ENSMUST00000234507.2	1653	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACTTCTGTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29566256	29551056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555140_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUSG00000024012.19_4	chr17	-	1645	12	FSM	ENSMUSG00000024012.19	ENSMUST00000235088.2	1660	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACTTCTGTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29566317	29551056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566094
ENSMUSG00000024012.19_5	chr17	-	1881	12	FSM	ENSMUSG00000024012.19	ENSMUST00000118366.9	1897	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGACTTCTGTGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29566899	29551056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29551753_29552487_29552564_29552748_29552817_29552931_29552980_29555191_29555286_29557715_29557776_29558764_29558817_29559041_29559100_29559394_29559473_29559764_29559872_29561796_29561882_29566440
ENSMUSG00000024013.16_0	chr17	+	2634	16	FSM	ENSMUSG00000024013.16	ENSMUST00000024810.8	2640	16	2	4	2	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGTGAGGGTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	29579889	29598523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29580132_29582684_29582917_29583884_29583966_29584435_29584585_29585944_29586102_29586244_29586384_29586894_29586954_29587157_29587305_29588218_29588312_29592191_29592272_29592357_29592389_29592984_29593078_29593820_29593953_29595801_29595949_29597286_29597434_29597818
ENSMUSG00000024014.9_0	chr17	+	2680	6	FSM	ENSMUSG00000024014.9	ENSMUST00000024811.9	2698	6	14	4	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	29709740	29715082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29710200_29710298_29710406_29710493_29710545_29710638_29711006_29712695_29712873_29713563
ENSMUSG00000024014.9_1	chr17	+	1783	3	FSM	ENSMUSG00000024014.9	ENSMUST00000234665.2	1794	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	29712021	29715082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29712109_29712695_29712873_29713563
ENSMUSG00000024014.9_3	chr17	+	1696	2	FSM	ENSMUSG00000024014.9	ENSMUST00000234270.2	867	2	315	-1144	315	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTTGAGTTTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	29712695	29715082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29712873_29713563
ENSMUSG00000024018.19_0	chr17	-	7108	5	FSM	ENSMUSG00000024018.19	ENSMUST00000129091.9	7117	5	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTATATGTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	29935982	29912441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29919227_29923343_29923444_29924244_29924298_29924462_29924558_29935907
ENSMUSG00000024018.19_2	chr17	-	1375	4	FSM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCCAAGATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	29936006	29922315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29923444_29924244_29924298_29924462_29924558_29935907
ENSMUSG00000024018.19_3	chr17	-	1278	3	ISM	ENSMUSG00000024018.19	ENSMUST00000128751.3	1397	4	11459	10	11424	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCCAAGATTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	29924559	29922315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_29923444_29924244_29924298_29924462
ENSMUSG00000024019.19_0	chr17	+	6364	24	FSM	ENSMUSG00000024019.19	ENSMUST00000024816.13	6380	24	4	12	4	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAAACCACTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	29879572	29924941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29879746_29882145_29882281_29893112_29893265_29895104_29895264_29897963_29898057_29899562_29899635_29900891_29900987_29901095_29901169_29904824_29905024_29906009_29906129_29908868_29908966_29909281_29909415_29910218_29910399_29913221_29913279_29913758_29913817_29914399_29914469_29916057_29916190_29916922_29917046_29917611_29917704_29918193_29918263_29919207_29919256_29919944_29920058_29920458_29920568_29921127
ENSMUSG00000024026.14_0	chr17	-	9851	6	FSM	ENSMUSG00000024026.14	ENSMUST00000236335.2	9865	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCGGTAAGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30831622	30803912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024026.14_10	chr17	-	885	7	FSM	ENSMUSG00000024026.14	ENSMUST00000167624.2	895	7	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATAAAGGTCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	30831628	30811844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441
ENSMUSG00000024026.14_8	chr17	-	1113	8	FSM	ENSMUSG00000024026.14	ENSMUST00000235547.2	1127	8	4	10	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACATAAAGGTCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	30845841	30811844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_30812049_30813088_30813201_30815347_30815438_30816778_30816847_30819012_30819154_30822993_30823077_30831441_30831771_30845755
ENSMUSG00000024027.9_0	chr17	+	5809	13	FSM	ENSMUSG00000024027.9	ENSMUST00000114574.3	5811	13	1	1	1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCGAGAGCTTTCCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	31120791	31159764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31120929_31127094_31127192_31128197_31128306_31137853_31137973_31138329_31138437_31143474_31143629_31144491_31144652_31148910_31148972_31149500_31149571_31149691_31149781_31150122_31150262_31151586_31151629_31155238
ENSMUSG00000024030.8_0	chr17	+	5809	15	FSM	ENSMUSG00000024030.8	ENSMUST00000024829.8	5832	15	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAATTTTTACGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	31276672	31336951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31276831_31283358_31283603_31311282_31311401_31313619_31313753_31317226_31317278_31323010_31323157_31324490_31324615_31325033_31325149_31327279_31327429_31327588_31327691_31328456_31328626_31329930_31330032_31330194_31330354_31331902_31332022_31333030
ENSMUSG00000024033.11_0	chr17	-	1183	9	FSM	ENSMUSG00000024033.11	ENSMUST00000024832.9	1191	9	3	5	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGAGCCTCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	31496354	31473997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31474194_31477071_31477201_31477761_31477922_31480728_31480801_31484787_31484924_31485316_31485408_31492290_31492397_31492498_31492613_31496175
ENSMUSG00000024034.14_0	chr17	-	1495	12	FSM	ENSMUSG00000024034.14	ENST00000433957.7	1504	12	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGTGGAGTGACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	31417241	31402789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31402941_31403542_31403690_31405476_31405573_31407273_31407444_31408112_31408279_31408646_31408691_31409974_31410101_31412427_31412552_31412882_31413000_31413871_31413983_31416574_31416717_31417140
ENSMUSG00000024037.14_0	chr17	-	4139	11	FSM	ENSMUSG00000024037.14	ENSMUST00000171171.9	4154	11	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCACGTTGTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31731714	31713299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31715903_31717471_31717542_31717962_31718147_31718782_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742_31728887_31729551_31729621_31731140
ENSMUSG00000024037.14_8	chr17	-	936	8	FSM	ENSMUSG00000024037.14	ENST00000330317.6	950	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCGGCAAAGGAGCCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	31728844	31715792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31715903_31717914_31718147_31718785_31718848_31719587_31719687_31720188_31720250_31721744_31721858_31722483_31722641_31728742
ENSMUSG00000024038.18_0	chr17	+	473	3	FSM	ENSMUSG00000024038.18	ENSMUST00000064798.16	493	3	10	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCTCACTATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	31739098	31750295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31739236_31740542_31740667_31750083
ENSMUSG00000024038.18_2	chr17	+	1559	4	FSM	ENSMUSG00000024038.18	ENSMUST00000046288.16	1582	4	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGCTCACTATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	31739104	31750295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31739236_31740542_31740667_31746283_31747376_31750083
ENSMUSG00000024039.16_0	chr17	-	6211	17	FSM	ENSMUSG00000024039.16	ENSMUST00000236853.2	6226	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTCTGTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31856164	31827873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUSG00000024039.16_1	chr17	-	2527	17	FSM	ENSMUSG00000024039.16	ENSMUST00000067801.14	2533	17	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTATTTCCCTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31856212	31831602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31832268_31833502_31833545_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852126_31856056
ENSMUSG00000024039.16_3	chr17	-	2392	16	FSM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATACCTGTGGTCGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	31856136	31831622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801_31852129_31856056
ENSMUSG00000024039.16_6	chr17	-	2308	15	ISM	ENSMUSG00000024039.16	ENSMUST00000078509.12	2403	16	4017	6	4017	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGTGGTCGTGTCGAC	NA	NA	NA	NA	NA	NA	NA	NA	31852122	31831620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_31832268_31834447_31834533_31835019_31835129_31836100_31836236_31836361_31836437_31838111_31838218_31839902_31839988_31840411_31840538_31841400_31841493_31843202_31843273_31843972_31844108_31844464_31844545_31844856_31844992_31846449_31846557_31851801
ENSMUSG00000024043.14_0	chr17	-	5297	18	FSM	ENSMUSG00000024043.14	ENSMUST00000024840.12	5322	18	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGACATAAGATTAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	68311100	68149717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_68152813_68156047_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188521_68191713_68191804_68203043_68203262_68208276_68208501_68310889
ENSMUSG00000024043.14_1	chr17	-	1734	15	FSM	ENSMUSG00000024043.14	ENST00000531294.5	1753	15	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGGTAAGGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68203251	68156055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_68156113_68159905_68160031_68162428_68162486_68164410_68164525_68165148_68165347_68168267_68168351_68171457_68171621_68175945_68176024_68178683_68178776_68178877_68179044_68180017_68180161_68182568_68182654_68188430_68188517_68191724_68191804_68203043
ENSMUSG00000024044.20_0	chr17	+	4676	22	FSM	ENSMUSG00000024044.20	ENSMUST00000239167.2	4692	22	8	8	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAAAGCTCTCGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69434002	69596976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69434741_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69580876_69580913_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_20	chr17	+	3187	20	FSM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTACCCCAGATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	69463840	69596319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_24	chr17	+	4360	20	FSM	ENSMUSG00000024044.20	ENSMUST00000238898.2	4368	20	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAAAGCTCTCGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69463852	69596976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69580876_69580913_69581698_69581891_69588027_69588103_69589555_69590276_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_26	chr17	+	3937	21	ISM	ENSMUSG00000024044.20	ENSMUST00000080208.7	4047	22	51046	12	-14	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGAAAAGCTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	69514850	69596972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69580876_69580913_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_27	chr17	+	3120	19	ISM	ENSMUSG00000024044.20	ENSMUST00000225977.2	3188	20	51016	0	-9	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTACCCCAGATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	69514855	69596319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581698_69581891_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_3	chr17	+	4056	22	FSM	ENSMUSG00000024044.20	ENSMUST00000112680.8	4073	22	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTGAAAAGCTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	69463813	69596972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69581095_69581162_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024044.20_7	chr17	+	4028	22	FSM	ENSMUSG00000024044.20	ENSMUST00000080208.7	4047	22	6	13	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCATTGAAAAGCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	69463810	69596971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69463906_69514853_69515072_69517180_69517379_69545339_69545445_69546741_69546785_69550582_69550659_69554530_69554750_69555624_69555713_69560390_69560544_69564365_69564464_69566007_69566184_69569120_69569342_69577605_69577660_69580876_69580913_69581698_69581891_69590879_69591003_69591533_69591912_69592896_69593029_69593707_69593807_69594251_69594333_69594606_69594724_69595845
ENSMUSG00000024045.7_0	chr17	-	3718	14	FSM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGACATTTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32540153	32522652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744_32537784_32540058
ENSMUSG00000024045.7_2	chr17	-	3625	13	ISM	ENSMUSG00000024045.7	ENSMUST00000002699.7	3731	14	2374	7	2374	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGACATTTGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32537785	32522652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_32524681_32525463_32525560_32528392_32528524_32529551_32529646_32529926_32530069_32531259_32531348_32533084_32533119_32534415_32534463_32534628_32534759_32535160_32535642_32536040_32536321_32536819_32536853_32537744
ENSMUSG00000024048.16_0	chr17	-	1920	4	FSM	ENSMUSG00000024048.16	ENSMUST00000148960.8	1937	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	23223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGAGAACAGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	71309539	71300657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71301780_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000024049.16_1	chr17	+	5170	37	FSM	ENSMUSG00000024049.16	ENST00000356443.9	5185	37	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCAGAGACTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71326496	71433358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71326647_71329842_71330193_71341565_71341707_71343268_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71389197_71389492_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71427640_71427678_71429533_71429608_71433070
ENSMUSG00000024049.16_22	chr17	+	4699	35	FSM	ENSMUSG00000024049.16	ENST00000261606.11	4714	35	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCAGAGACTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71329869	71433358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71330193_71341565_71341707_71343268_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71427640_71427678_71429533_71429608_71433070
ENSMUSG00000024049.16_56	chr17	+	4360	34	FSM	ENSMUSG00000024049.16	ENST00000400569.7	4378	34	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGCAGAGACTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71341581	71433358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71341707_71343268_71343519_71344210_71344369_71351480_71351574_71352538_71352628_71352731_71352792_71354718_71354884_71359608_71359771_71368119_71368262_71371442_71371643_71374307_71374365_71379077_71379203_71384251_71384436_71384759_71384935_71387768_71387891_71391232_71391430_71394438_71394566_71396817_71397003_71399094_71399210_71406948_71407106_71407988_71408096_71408218_71408264_71412457_71412595_71413198_71413344_71415295_71415356_71415620_71415689_71416721_71416836_71417701_71417790_71418805_71418845_71418938_71419045_71424288_71424453_71427640_71427678_71429533_71429608_71433070
ENSMUSG00000024050.19_0	chr17	-	3632	7	FSM	ENSMUSG00000024050.19	ENST00000389282.8	3642	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGGTACTGTGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	32581895	32572854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576959_32577916_32578469_32580434_32580939_32581766
ENSMUSG00000024050.19_4	chr17	-	4154	9	FSM	ENSMUSG00000024050.19	ENSMUST00000087703.12	4175	9	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCCCAGGGCAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	32607847	32573039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32574158_32575396_32575593_32575862_32576283_32576430_32576956_32577916_32578469_32580434_32580939_32586797_32587122_32606546_32606792_32607577
ENSMUSG00000024052.18_0	chr17	+	5621	20	FSM	ENSMUSG00000024052.18	ENSMUST00000129635.8	5640	20	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAACTGATTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	71490979	71556800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71491076_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ENSMUSG00000024052.18_2	chr17	+	4135	20	FSM	ENSMUSG00000024052.18	ENSMUST00000126681.8	4167	20	10	22	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	71511680	71555215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71511876_71521958_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ENSMUSG00000024052.18_3	chr17	+	5528	19	ISM	ENSMUSG00000024052.18	ENSMUST00000126681.8	4167	20	10288	-1566	10288	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTGATTGCATTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	71521958	71556803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_71522160_71529049_71529146_71531934_71532237_71536302_71536411_71537266_71537391_71538177_71538515_71540822_71540923_71544380_71544569_71545602_71545697_71546078_71546149_71547806_71547897_71548638_71548722_71549620_71549766_71550282_71550432_71550919_71551007_71551766_71551920_71552113_71552229_71553410_71553515_71553821
ENSMUSG00000024053.12_0	chr17	-	3924	8	FSM	ENSMUSG00000024053.12	ENSMUST00000233057.2	3939	8	7	8	7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTATGTTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71617978	71559174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318_71563688_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024053.12_2	chr17	-	3895	8	FSM	ENSMUSG00000024053.12	ENSMUST00000024849.11	3906	8	4	7	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTATGTTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71617952	71559174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318_71563685_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024053.12_3	chr17	-	3864	8	FSM	ENSMUSG00000024053.12	ENSMUST00000233245.2	3883	8	13	6	13	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTATGTTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71618538	71559174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71560089_71562113_71562243_71562974_71563008_71563318_71563688_71580368_71582283_71587668_71587845_71617143_71617267_71618332
ENSMUSG00000024053.12_5	chr17	-	3182	8	FSM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGGAATCACTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	71617793	71559181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71559201_71559690_71560089_71562113_71562285_71563318_71563619_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024053.12_7	chr17	-	3163	7	ISM	ENSMUSG00000024053.12	ENST00000254528.4	3191	8	6	512	6	-512	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGGAGCACTGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	71617793	71559690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_71560089_71562113_71562285_71563318_71563619_71580368_71582283_71587668_71587845_71617143_71617267_71617712
ENSMUSG00000024054.15_0	chr17	-	7034	48	FSM	ENSMUSG00000024054.15	ENSMUST00000127430.2	7052	48	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTAGTGGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	71782327	71651490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71652361_71655880_71655996_71656584_71656744_71660380_71660553_71665131_71665203_71665342_71665453_71667021_71667213_71668835_71668959_71670014_71670101_71672083_71672204_71672340_71672468_71676802_71676956_71677218_71677351_71677903_71677992_71684008_71684074_71685142_71685259_71686536_71686695_71687123_71687204_71688326_71688453_71693939_71694108_71696737_71696857_71697421_71697511_71698346_71698496_71701711_71701940_71705546_71705685_71707053_71707194_71710092_71710166_71714161_71714259_71718764_71718910_71722029_71722150_71722595_71722674_71733149_71733264_71733434_71733518_71734431_71734539_71735166_71735281_71736456_71736652_71738216_71738401_71743700_71743822_71747898_71748110_71748870_71748962_71750876_71751044_71755507_71755628_71755726_71755842_71762599_71762731_71763412_71763496_71770756_71770919_71772588_71772665_71781973
ENSMUSG00000024055.16_0	chr17	-	1735	13	FSM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTATGAGCATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	33166365	33143667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778_33165978_33166286
ENSMUSG00000024055.16_1	chr17	-	1658	12	ISM	ENSMUSG00000024055.16	ENSMUST00000075253.13	1752	13	397	6	374	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTATGAGCATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	33165979	33143667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_33143929_33144297_33144381_33144510_33144576_33144663_33144798_33148111_33148242_33148443_33148511_33148828_33149097_33149514_33149637_33151386_33151515_33151602_33151657_33160029_33160175_33165778
ENSMUSG00000024056.11_0	chr17	-	2184	17	FSM	ENSMUSG00000024056.11	ENSMUST00000024851.10	2201	17	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGAGTGTCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	71833843	71803102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71803349_71806261_71806365_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ENSMUSG00000024056.11_17	chr17	-	1996	16	FSM	ENSMUSG00000024056.11	ENSMUST00000232863.2	2009	16	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGATCAGACAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	71833791	71803135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71803349_71807266_71807398_71808503_71808597_71811760_71811851_71814254_71814408_71815562_71815769_71818339_71818485_71819387_71819495_71821183_71821278_71824538_71824629_71825732_71825836_71827754_71827928_71828022_71828147_71830576_71830655_71832627_71832738_71833705
ENSMUSG00000024059.11_0	chr17	+	2430	16	FSM	ENSMUSG00000024059.11	ENSMUST00000024854.9	2480	16	24	26	24	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTTTAAAAAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	72088965	72163745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_72089065_72096862_72097011_72105951_72106092_72107793_72107888_72108769_72108932_72110550_72110670_72113499_72113737_72117841_72117978_72131684_72131826_72134686_72134777_72135501_72135646_72138199_72138335_72141178_72141303_72144688_72144754_72156886_72156960_72163222
ENSMUSG00000024063.14_0	chr17	+	3059	3	FSM	ENSMUSG00000024063.14	ENSMUST00000024857.14	3069	3	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGGTTTGGGTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	73225308	73248941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73225574_73228182_73228286_73246250
ENSMUSG00000024065.9_0	chr17	+	3652	6	FSM	ENSMUSG00000024065.9	ENSMUST00000024860.9	3659	6	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTTTGGTGACTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	74111841	74139088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74112465_74123225_74123403_74127472_74127571_74134144_74134558_74135040_74135206_74136912
ENSMUSG00000024066.10_2	chr17	-	3932	35	FSM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGTAGGATACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74257099	74193343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74193515_74198105_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750_74246857_74248036_74248134_74250841_74250900_74257072
ENSMUSG00000024066.10_3	chr17	-	3900	34	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	6205	6	6205	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGTAGGATACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74250894	74193343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_74193515_74198105_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750_74246857_74248036_74248134_74250841
ENSMUSG00000024066.10_5	chr17	-	3847	33	ISM	ENSMUSG00000024066.10	ENST00000379416.4	3938	35	8966	6	8966	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGGTAGGATACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	74248133	74193343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_74193515_74198105_74198295_74199713_74199780_74200594_74200710_74202738_74202792_74204001_74204077_74204676_74204806_74205310_74205407_74205955_74206038_74207256_74207403_74207526_74207719_74213004_74213092_74213198_74213287_74213689_74213824_74214615_74214741_74216236_74216339_74217160_74217281_74219411_74219536_74220865_74221036_74222671_74222756_74223782_74223958_74225367_74225553_74227387_74227498_74228261_74228356_74229407_74229560_74230037_74230131_74231909_74232052_74233168_74233256_74233542_74233612_74241796_74241859_74242866_74242994_74246750_74246857_74248036
ENSMUSG00000024067.15_0	chr17	-	716	5	FSM	ENSMUSG00000024067.15	ENSMUST00000233581.2	734	5	11	7	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATAGTTGTTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	74623447	74606475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74623339
ENSMUSG00000024067.15_4	chr17	-	665	4	FSM	ENSMUSG00000024067.15	ENSMUST00000232687.2	694	4	19	10	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCTTTATTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	74623179	74606486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038
ENSMUSG00000024067.15_6	chr17	-	764	5	FSM	ENSMUSG00000024067.15	ENSMUST00000164832.9	789	5	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCTTTATTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	74630922	74606486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74606820_74614714_74614858_74622896_74622945_74623038_74623112_74630755
ENSMUSG00000024068.9_0	chr17	+	2049	17	FSM	ENSMUSG00000024068.9	ENSMUST00000224711.2	2066	17	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTTTTGTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	74645991	74695474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_12	chr17	+	3133	16	FSM	ENSMUSG00000024068.9	ENSMUST00000233611.2	1746	16	132	-1519	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGATTATTTCTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74646163	74696826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74646441_74658947_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_15	chr17	+	3131	16	FSM	ENSMUSG00000024068.9	ENST00000644954.1	3150	16	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCCTAGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	74646176	74696834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024068.9_3	chr17	+	4668	17	FSM	ENSMUSG00000024068.9	ENSMUST00000024869.8	4672	17	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTATAGTCTTCGATA	NA	NA	NA	NA	NA	NA	NA	NA	74646009	74698108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74646441_74658944_74659032_74663080_74663165_74666248_74666345_74674242_74674431_74675822_74675957_74676186_74676281_74678424_74678500_74679253_74679326_74680278_74680355_74680657_74680750_74681117_74681198_74682077_74682121_74684035_74684116_74688964_74689036_74694028_74694070_74695184
ENSMUSG00000024069.15_0	chr17	+	2148	14	FSM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATTTACAATCGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74702602	74731216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74702664_74708906_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_12	chr17	+	2081	13	ISM	ENSMUSG00000024069.15	ENSMUST00000024870.9	2148	14	6310	0	7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCATTTACAATCGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74708912	74731216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74726526_74726596_74730011
ENSMUSG00000024069.15_22	chr17	+	1434	11	ISM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	2092	0	2092	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGTTTGGATATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	74710997	74730718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024069.15_8	chr17	+	1514	12	FSM	ENSMUSG00000024069.15	ENST00000435660.5	1521	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAGTTTGGATATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	74708912	74730718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74708994_74710998_74711084_74712679_74712723_74714215_74714282_74715840_74715922_74716347_74716384_74717328_74717424_74719268_74719318_74719601_74719722_74722614_74722718_74725614_74725663_74730011
ENSMUSG00000024070.16_0	chr17	-	5875	19	FSM	ENSMUSG00000024070.16	ENSMUST00000168887.8	5884	19	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCATACTTTCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	79328245	79256842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270006_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ENSMUSG00000024070.16_1	chr17	-	4710	19	FSM	ENSMUSG00000024070.16	ENSMUST00000119284.8	4743	19	14	19	14	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCACAAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	79328231	79257996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79259460_79260105_79260192_79261902_79262171_79263950_79264050_79264570_79264733_79266460_79266568_79268539_79268613_79269955_79270009_79273603_79273881_79275468_79275547_79278788_79278913_79279831_79280016_79282163_79282242_79282803_79282997_79289202_79289361_79290954_79291087_79292643_79292783_79320052_79320971_79328113
ENSMUSG00000024072.10_0	chr17	+	2116	6	FSM	ENSMUSG00000024072.10	ENSMUST00000024873.7	2133	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGATCTACAAAAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	74796496	74807264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74796790_74799340_74799501_74800922_74801095_74803584_74803663_74805303_74805418_74805965
ENSMUSG00000024073.17_0	chr17	+	15747	73	FSM	ENSMUSG00000024073.17	ENSMUST00000180037.8	15768	73	12	9	12	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGTATGTCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74835301	75010342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913131_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ENSMUSG00000024073.17_49	chr17	+	14594	73	FSM	ENSMUSG00000024073.17	ENSMUST00000182944.8	14610	73	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGAGCTGCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	74835470	75009370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913119_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ENSMUSG00000024073.17_56	chr17	+	14589	73	FSM	ENSMUSG00000024073.17	ENSMUST00000182133.8	14604	73	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGAGCTGCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	74835469	75009370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913131_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920389_74920592_74921293_74921428_74922214_74922326_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ENSMUSG00000024073.17_61	chr17	+	14611	73	FSM	ENSMUSG00000024073.17	ENSMUST00000182597.8	14649	73	30	8	30	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGAGCTGCATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	74835492	75009370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_74835797_74853231_74853414_74855707_74855846_74864895_74865090_74868145_74868258_74869013_74869097_74872785_74873170_74880567_74880627_74886159_74887558_74892947_74893098_74896589_74896816_74900083_74900245_74901358_74901449_74901864_74901997_74903851_74904034_74905033_74905168_74905977_74906140_74906231_74906364_74906864_74906963_74909959_74910108_74911488_74911623_74912983_74913131_74915091_74915280_74916053_74916384_74916631_74916732_74917989_74918205_74918342_74918552_74918993_74919341_74920371_74920592_74921293_74921428_74922214_74922353_74925430_74925559_74926701_74926834_74929030_74929247_74929903_74930088_74930745_74930902_74932100_74932235_74933956_74934111_74936399_74936517_74937954_74938110_74938605_74938733_74941790_74941902_74942757_74942892_74945337_74945466_74946774_74947338_74948627_74948804_74949255_74949353_74949486_74949682_74950289_74950491_74953463_74953744_74954198_74954456_74954711_74954821_74955112_74955335_74956617_74957399_74958902_74959047_74959611_74959742_74961383_74961516_74962166_74962335_74965172_74965347_74966153_74966351_74967376_74967678_74969595_74969814_74975753_74975919_74977208_74977378_74984160_74984375_74996212_74996359_74997352_74997464_74997996_74998215_74999178_74999341_75000442_75000521_75003231_75003421_75004379_75004515_75009198
ENSMUSG00000024074.9_0	chr17	+	5984	17	FSM	ENSMUSG00000024074.9	ENSMUST00000112498.3	5995	17	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGAGTTCTGTAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78507681	78684015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_78508529_78545170_78545345_78587401_78587645_78588674_78588796_78610415_78610538_78620552_78620736_78622977_78623176_78642655_78642785_78651778_78651936_78653289_78653412_78654505_78654716_78658112_78658329_78662384_78662607_78675220_78675416_78677423_78677547_78680006_78680198_78681484
ENSMUSG00000024076.11_0	chr17	+	2042	12	FSM	ENSMUSG00000024076.11	ENST00000404084.5	2057	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGCTGGGACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	78815609	78934345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_78815755_78842043_78842114_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894298_78909253_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024076.11_6	chr17	+	2081	14	FSM	ENSMUSG00000024076.11	ENST00000379241.7	2096	14	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGCTGGGACCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	78815649	78934345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_78815755_78842043_78842114_78853807_78853874_78873443_78873601_78881513_78881648_78886782_78886861_78894086_78894273_78900669_78900727_78909272_78909336_78912849_78912998_78926985_78927090_78930069_78930297_78932154_78932669_78934173
ENSMUSG00000024077.16_0	chr17	-	8613	18	FSM	ENSMUSG00000024077.16	ENSMUST00000145910.9	8629	18	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATAGTTCATGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79044618	78957350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78980004_78980116_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ENSMUSG00000024077.16_3	chr17	-	2274	17	FSM	ENSMUSG00000024077.16	ENST00000379213.3	2289	17	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCACAACAGCGATACG	NA	NA	NA	NA	NA	NA	NA	NA	79043917	78962877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_78963089_78963177_78963265_78964336_78964445_78965312_78965454_78967472_78967641_78969190_78969313_78970489_78970538_78972047_78972224_78974550_78974688_78977179_78977324_78984710_78984847_78990256_78990393_78991658_78991827_78995020_78995100_78999822_78999897_79008278_79008383_79043682
ENSMUSG00000024078.8_0	chr17	+	2823	20	FSM	ENSMUSG00000024078.8	ENSMUST00000024882.8	2838	20	8	7	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCCTTATTTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75024734	75170558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170328
ENSMUSG00000024078.8_7	chr17	+	2639	20	FSM	ENSMUSG00000024078.8	ENSMUST00000234568.2	2651	20	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTCCTTATTTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75024915	75170558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75025007_75025628_75025807_75028515_75028646_75031612_75031754_75036877_75036981_75046592_75046758_75049912_75050047_75054646_75054760_75058056_75058124_75077237_75077352_75084638_75084735_75087777_75087901_75106178_75106407_75136486_75136586_75142327_75142381_75147293_75147460_75163403_75163602_75165003_75165116_75169040_75169142_75170331
ENSMUSG00000024079.5_0	chr17	-	4286	16	FSM	ENSMUSG00000024079.5	ENSMUST00000024884.5	4313	16	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGATAAATAAATAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	79189992	79160009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79162691_79162771_79162829_79163995_79164098_79165929_79166062_79171267_79171449_79172730_79172851_79173743_79173867_79176185_79176237_79176904_79176940_79177915_79177965_79178082_79178163_79178577_79178699_79181371_79181509_79183610_79183732_79185570_79185703_79189828
ENSMUSG00000024081.10_0	chr17	-	4049	16	FSM	ENSMUSG00000024081.10	ENSMUST00000024885.10	4070	16	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGTATATTAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	79244482	79226442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79227447_79227977_79228060_79228150_79228210_79229063_79229151_79229558_79229744_79229942_79230001_79230664_79230766_79231874_79231942_79233342_79233412_79233511_79233615_79234297_79234352_79236706_79236796_79238738_79238926_79239538_79239771_79242003_79243497_79244303
ENSMUSG00000024082.6_0	chr17	+	1743	10	FSM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	2	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAAATTGTCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	79244566	79254924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUSG00000024082.6_5	chr17	+	2704	9	FSM	ENSMUSG00000024082.6	ENSMUST00000233068.2	2706	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAGTTGTCTGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79244567	79255481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79244631_79244919_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724
ENSMUSG00000024082.6_7	chr17	+	1673	9	ISM	ENSMUSG00000024082.6	ENSMUST00000024887.6	1749	10	361	4	360	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGAAATTGTCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	79244925	79254924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_79245084_79245969_79246051_79247023_79247135_79249497_79249712_79250681_79250741_79251262_79251374_79252369_79252514_79253724_79253899_79254303
ENSMUSG00000024083.17_0	chr17	-	4725	10	FSM	ENSMUSG00000024083.17	ENSMUST00000172818.8	4740	10	11	4	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAATTGTGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	64638900	64588003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUSG00000024083.17_11	chr17	-	4479	9	FSM	ENSMUSG00000024083.17	ENSMUST00000172733.2	4488	9	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGTGTTCATTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	64638857	64588020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995_64620114_64638790
ENSMUSG00000024083.17_12	chr17	-	4411	8	FSM	ENSMUSG00000024083.17	ENSMUST00000024889.14	4345	8	-86	20	-86	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGGTGTTCATTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	64620112	64588020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64615616_64616662_64618165_64618367_64619995
ENSMUSG00000024083.17_2	chr17	-	4528	9	FSM	ENSMUSG00000024083.17	ENSMUST00000024888.15	4531	9	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTAATTGTGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	64620026	64588003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_64590534_64593995_64594118_64594522_64594638_64596927_64597040_64599833_64600020_64604718_64604905_64615616_64616662_64618165_64618367_64619995
ENSMUSG00000024084.9_0	chr17	+	2049	7	FSM	ENSMUSG00000024084.9	ENSMUST00000040789.6	2059	7	7	3	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACAGAATAACTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	79359341	79397804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79359818_79371356_79371504_79378101_79378381_79384910_79385088_79386895_79386996_79389175_79389293_79397051
ENSMUSG00000024085.14_0	chr17	+	6987	22	FSM	ENSMUSG00000024085.14	ENSMUST00000086723.10	6991	22	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTTCTGGAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	64907734	65062105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_64908866_64931522_64931775_64932301_64932447_64943478_64943651_64958190_64958319_64965895_64966070_64973731_64973919_64976406_64976585_64978842_64979046_64982059_64982243_64986746_64986862_64988549_64988621_65017698_65017865_65019246_65019469_65020556_65020680_65021592_65021708_65038198_65038333_65040718_65040861_65041928_65042063_65047674_65047879_65057778_65057890_65059408
ENSMUSG00000024087.5_0	chr17	-	3384	4	FSM	ENSMUSG00000024087.5	ENSMUST00000234361.2	3398	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTCTACTGTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	80022480	80014326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80015931_80017739_80018111_80020697_80021742_80022115
ENSMUSG00000024087.5_1	chr17	-	5116	3	FSM	ENSMUSG00000024087.5	ENSMUST00000024894.2	5128	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCATAATCCTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	80022465	80014388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80018111_80020697_80021742_80022115
ENSMUSG00000024091.10_1	chr17	-	3352	6	FSM	ENSMUSG00000024091.10	ENSMUST00000024897.10	3369	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	8042	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTTTCTTAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	65920540	65885328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_65887843_65889574_65889749_65899285_65899367_65900434_65900539_65901896_65902050_65920214
ENSMUSG00000024095.16_0	chr17	-	2996	13	FSM	ENSMUSG00000024095.16	ENSMUST00000184635.8	3009	13	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCATACTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80369649	80336921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356291_80357235_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUSG00000024095.16_4	chr17	-	3103	13	FSM	ENSMUSG00000024095.16	ENSMUST00000061331.14	3116	13	7	6	7	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATCATACTAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	80369756	80336921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80337970_80339969_80340069_80340156_80340215_80341474_80341677_80342759_80342882_80346020_80346239_80351922_80351995_80356036_80356110_80356193_80356290_80357234_80357322_80358056_80358295_80360951_80361071_80369085
ENSMUSG00000024096.18_0	chr17	-	3782	10	FSM	ENSMUSG00000024096.18	ENSMUST00000024905.11	3811	10	9	20	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTGAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66191940	66155432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66191672
ENSMUSG00000024096.18_1	chr17	-	3673	10	FSM	ENSMUSG00000024096.18	ENST00000019317.8	3697	10	7	17	7	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTGAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66192335	66155432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192176
ENSMUSG00000024096.18_33	chr17	-	3784	10	FSM	ENSMUSG00000024096.18	ENSMUST00000166543.10	3799	10	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTGATTTTTGTACGG	NA	NA	NA	NA	NA	NA	NA	NA	66192778	66155760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66157191_66159114_66159239_66159684_66159807_66161086_66161195_66164656_66164789_66165967_66166130_66168250_66168601_66171268_66171728_66174526_66174826_66192180
ENSMUSG00000024097.12_0	chr17	-	2362	7	FSM	ENSMUSG00000024097.12	ENST00000446327.6	2386	7	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAACAAATAATCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	80514857	80507521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80509032_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_1	chr17	-	2262	8	FSM	ENSMUSG00000024097.12	ENSMUST00000063417.11	2288	8	11	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTGAACAAATAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80514723	80507523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511550_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024097.12_16	chr17	-	1027	8	FSM	ENSMUSG00000024097.12	ENSMUST00000235069.2	1040	8	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGATGTTTTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80514719	80508745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80509032_80509597_80509634_80510119_80510174_80511559_80511662_80511741_80511817_80512690_80512868_80513276_80513458_80514603
ENSMUSG00000024098.7_0	chr17	-	1798	5	ISM	ENSMUSG00000024098.7	ENSMUST00000233580.2	1850	6	2303	1	2303	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAACATGTGAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	66255807	66228967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_66230034_66233251_66233462_66236541_66236809_66244795_66244896_66255652
ENSMUSG00000024098.7_1	chr17	-	1842	6	FSM	ENSMUSG00000024098.7	ENSMUST00000233580.2	1850	6	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCAGAGAACATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	66258108	66228972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66230034_66233251_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ENSMUSG00000024098.7_2	chr17	-	4077	5	FSM	ENSMUSG00000024098.7	ENSMUST00000024906.6	4086	5	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAGTCATGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66258219	66230066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66233462_66236541_66236809_66244795_66244896_66255652_66255810_66258061
ENSMUSG00000024099.16_1	chr17	-	1681	8	FSM	ENSMUSG00000024099.16	ENSMUST00000143987.9	1697	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAGAAAGGAGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	66408544	66385638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66408409
ENSMUSG00000024099.16_10	chr17	-	926	9	FSM	ENSMUSG00000024099.16	ENSMUST00000024909.15	927	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAGCTTTATTCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	66408489	66386435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66386583_66387805_66387883_66390392_66390503_66394397_66394567_66396226_66396344_66396425_66396489_66398858_66398925_66407972_66408070_66408409
ENSMUSG00000024101.16_0	chr17	+	2901	11	FSM	ENSMUSG00000024101.16	ENSMUST00000072383.14	2905	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	66418543	66427498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66418645_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUSG00000024101.16_3	chr17	+	1823	11	FSM	ENSMUSG00000024101.16	ENSMUST00000116556.4	1831	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGGGAGCTGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66418647	66426442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66418727_66420857_66421012_66422665_66422778_66422948_66423096_66423254_66423392_66423623_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805_66425875_66425991
ENSMUSG00000024101.16_8	chr17	+	1617	7	FSM	ENSMUSG00000024101.16	ENST00000538033.2	1641	7	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTAAGAGTGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	66422668	66426123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66422778_66422948_66423096_66423254_66423757_66423967_66424170_66424258_66424439_66425057_66425217_66425805
ENSMUSG00000024104.12_0	chr6	+	4299	31	FSM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	4	4	4	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAATAAGAGTGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	116185002	116239643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116185089_116185167_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUSG00000024104.12_19	chr6	+	4214	30	ISM	ENSMUSG00000024104.12	ENSMUST00000036759.11	4307	31	168	4	168	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAATAAGAGTGCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	116185166	116239643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_116185291_116185914_116186080_116190908_116190972_116193006_116193181_116194710_116194805_116195621_116195684_116196913_116196962_116197497_116197606_116198776_116198859_116200156_116200214_116201381_116201498_116201936_116201995_116203384_116203448_116204306_116204496_116206183_116206312_116208502_116208590_116213057_116213160_116215092_116215225_116218407_116218584_116221550_116221654_116223068_116223222_116224936_116225120_116231050_116231180_116231373_116231455_116232009_116232130_116233187_116233251_116233576_116233790_116235602_116236218_116237451_116237630_116239295
ENSMUSG00000024107.8_0	chr17	-	1937	10	FSM	ENSMUSG00000024107.8	ENST00000405626.5	1945	10	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTATCTAAATATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89099303	89049410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_89050566_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024107.8_1	chr17	-	1857	9	ISM	ENSMUSG00000024107.8	ENST00000405626.5	1945	10	19797	6	19797	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTATCTAAATATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	89079508	89049410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_89050566_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439
ENSMUSG00000024107.8_5	chr17	-	1788	11	FSM	ENSMUSG00000024107.8	ENST00000403273.5	1808	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTCAACAACCTACACCT	NA	NA	NA	NA	NA	NA	NA	NA	89099391	89049462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_89050300_89057530_89057612_89061171_89061358_89062978_89063054_89065770_89065840_89072409_89072488_89072575_89072651_89074680_89074756_89077264_89077340_89079439_89079512_89099226
ENSMUSG00000024118.15_0	chr17	-	2142	10	FSM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	24439752	24434039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490_24439590_24439664
ENSMUSG00000024118.15_1	chr17	-	2055	9	ISM	ENSMUSG00000024118.15	ENSMUST00000024930.8	2166	10	174	12	174	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTCAAAAGTACCGGG	NA	NA	NA	NA	NA	NA	NA	NA	24439590	24434039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24434980_24435223_24435415_24436654_24436757_24436862_24436975_24437143_24437238_24438126_24438181_24438704_24439108_24439225_24439285_24439490
ENSMUSG00000024120.13_1	chr17	-	4371	38	FSM	ENSMUSG00000024120.13	ENSMUST00000112308.9	4393	38	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGTAAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85097977	85012687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_85012901_85013326_85013470_85014521_85014607_85015515_85015591_85017718_85017835_85017962_85018103_85020120_85020323_85024054_85024144_85030124_85030252_85033730_85033840_85033957_85034101_85038572_85038664_85039176_85039246_85047497_85047605_85047971_85048097_85056388_85056597_85057935_85058022_85058651_85058783_85059736_85059851_85060156_85060202_85060541_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635_85080758_85082816_85082940_85084368_85084563_85097792
ENSMUSG00000024120.13_15	chr17	-	2010	19	FSM	ENSMUSG00000024120.13	ENST00000682104.1	2022	19	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTAAGCTCATTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	85080753	85056392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_85056597_85057935_85058022_85058651_85058783_85059736_85059875_85060537_85060620_85060832_85060940_85061968_85062027_85063685_85063714_85069379_85069447_85071879_85071974_85074420_85074540_85077022_85077131_85077427_85077534_85077781_85077928_85078270_85078416_85078851_85078979_85079520_85079608_85080471_85080531_85080635
ENSMUSG00000024121.14_0	chr17	-	1169	3	FSM	ENSMUSG00000024121.14	ENSMUST00000024932.12	1183	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGACTGGCTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24388426	24382844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24383583_24383672_24383857_24388179
ENSMUSG00000024122.17_0	chr17	-	7140	14	FSM	ENSMUSG00000024122.17	ENSMUST00000102927.10	7161	14	13	8	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACACTTTGTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	24360556	24292661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ENSMUSG00000024122.17_10	chr17	-	4603	11	FSM	ENSMUSG00000024122.17	ENSMUST00000115409.9	4623	11	13	7	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGGAGTCAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24360531	24294792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24298117_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24326202_24326246_24329821_24330092_24360410
ENSMUSG00000024122.17_3	chr17	-	1699	14	FSM	ENSMUSG00000024122.17	ENSMUST00000115411.8	1724	14	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGTACACTTTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	24360509	24292663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24292725_24298465_24298619_24299351_24299410_24306977_24307196_24310394_24310569_24312164_24312262_24312513_24312583_24317067_24317144_24319784_24319883_24320575_24320721_24325800_24325939_24326202_24326246_24329821_24330092_24360410
ENSMUSG00000024127.16_1	chr17	-	3239	14	FSM	ENSMUSG00000024127.16	ENSMUST00000072406.5	3255	14	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACAAATTCCAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85397642	85370906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85397533
ENSMUSG00000024127.16_3	chr17	-	2232	13	FSM	ENSMUSG00000024127.16	ENST00000378511.7	2249	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGAGAAGGGAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	85396005	85371856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767
ENSMUSG00000024127.16_6	chr17	-	2721	15	FSM	ENSMUSG00000024127.16	ENSMUST00000171795.9	2734	15	7	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTCTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	85397645	85371963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_85372162_85372469_85372544_85373059_85373184_85373575_85373726_85376312_85376530_85377855_85378032_85379339_85379538_85383293_85383480_85384036_85384254_85385916_85386053_85388491_85388699_85389399_85389467_85390620_85390744_85395767_85396304_85397533
ENSMUSG00000024130.17_0	chr17	+	6431	33	FSM	ENSMUSG00000024130.17	ENSMUST00000039013.15	6476	33	34	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGACATGACCAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	24571030	24629164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24571226_24576892_24576966_24579861_24580064_24583450_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ENSMUSG00000024130.17_3	chr17	+	5193	27	FSM	ENSMUSG00000024130.17	ENSMUST00000117337.2	5202	27	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGACCAGTCTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	24583458	24629169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24583561_24583666_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24596659_24596834_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ENSMUSG00000024130.17_4	chr17	+	5013	28	FSM	ENSMUSG00000024130.17	ENST00000382381.7	5044	28	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGGACCATGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24583686	24628520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24583932_24585059_24585188_24585741_24585908_24593217_24593478_24595337_24595455_24595638_24595760_24600872_24601055_24602873_24603018_24603420_24603551_24604371_24604527_24604790_24604947_24605155_24605367_24606409_24606561_24611861_24611961_24615423_24615611_24616259_24616564_24617308_24617583_24618858_24619064_24619381_24619602_24619767_24619927_24621238_24621412_24623998_24624128_24624218_24624414_24626531_24626720_24627082_24627254_24627510_24627702_24627798_24627873_24628242
ENSMUSG00000024132.7_0	chr17	+	1120	7	FSM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAAACTCTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24645621	24658284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24645717_24645826_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUSG00000024132.7_4	chr17	+	1026	6	ISM	ENSMUSG00000024132.7	ENSMUST00000234304.2	1137	7	211	10	-139	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAAAACTCTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24645825	24658284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24645914_24652106_24652235_24655151_24655299_24656193_24656316_24656405_24656585_24657922
ENSMUSG00000024135.11_0	chr17	-	3527	21	FSM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	86452601	86292093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787_86449868_86452548
ENSMUSG00000024135.11_3	chr17	-	3476	20	ISM	ENSMUSG00000024135.11	ENSMUST00000095187.4	3530	21	2734	1	2734	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGTGTGCTGTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	86449869	86292093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_86292912_86295752_86295938_86307748_86307902_86308858_86309036_86311274_86311382_86358513_86358597_86365103_86365196_86405939_86406048_86406632_86406724_86410270_86410429_86416654_86416763_86422620_86422725_86427341_86427478_86428077_86428175_86433538_86433678_86435143_86435262_86437541_86437709_86443591_86443964_86446496_86446678_86449787
ENSMUSG00000024137.10_0	chr17	-	2552	14	FSM	ENSMUSG00000024137.10	ENSMUST00000056032.9	2574	14	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACCTGCAGTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24674274	24662763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24663312_24663387_24663451_24663520_24663664_24663749_24663949_24664095_24664314_24664419_24664526_24664919_24665130_24665487_24665655_24665755_24665909_24666063_24666185_24666271_24666466_24668595_24668708_24670379_24670532_24674108
ENSMUSG00000024142.16_0	chr17	-	3346	9	FSM	ENSMUSG00000024142.16	ENSMUST00000070888.14	3358	9	3	9	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCATCAGTGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24698049	24692535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697453_24697985
ENSMUSG00000024142.16_1	chr17	-	3284	8	FSM	ENSMUSG00000024142.16	ENSMUST00000234686.2	3855	8	563	8	558	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCATCAGTGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24697454	24692535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293
ENSMUSG00000024142.16_3	chr17	-	3119	7	FSM	ENSMUSG00000024142.16	ENSMUST00000234543.2	3127	7	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCATCAGTGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24698033	24692535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697985
ENSMUSG00000024142.16_4	chr17	-	3030	6	ISM	ENSMUSG00000024142.16	ENSMUST00000234686.2	3855	8	1059	8	1054	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCATCAGTGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24696958	24692535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836
ENSMUSG00000024142.16_5	chr17	-	1564	9	FSM	ENSMUSG00000024142.16	ENSMUST00000234335.2	1574	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGACACACAGATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24698012	24694285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24694926_24695019_24695184_24695298_24695424_24696154_24696308_24696403_24696480_24696836_24697000_24697084_24697137_24697293_24697458_24697985
ENSMUSG00000024143.16_0	chr17	+	4133	5	FSM	ENSMUSG00000024143.16	ENSMUST00000024956.15	4151	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTGGACTTCTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	87270517	87307487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87271176_87271727_87271787_87301986_87302152_87302431_87302528_87304332
ENSMUSG00000024145.7_0	chr17	-	975	6	FSM	ENSMUSG00000024145.7	ENSMUST00000024957.7	988	6	5	8	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTAGATTGTGGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87332829	87304691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87304996_87316230_87316340_87327828_87327946_87329286_87329379_87331092_87331342_87332725
ENSMUSG00000024145.7_3	chr17	-	542	2	FSM	ENSMUSG00000024145.7	ENST00000609270.1	554	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATAGTAGATTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	87306415	87304695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87304996_87306173
ENSMUSG00000024146.10_0	chr17	+	1173	5	FSM	ENSMUSG00000024146.10	ENSMUST00000024959.10	1184	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTCTTCAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	87332988	87343238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87333104_87335126_87335193_87338435_87338491_87341683_87341788_87342405
ENSMUSG00000024150.13_0	chr17	-	2024	4	FSM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCCTTCTCCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87573356	87561877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87573262
ENSMUSG00000024150.13_1	chr17	-	1931	3	ISM	ENSMUSG00000024150.13	ENSMUST00000024963.11	2038	4	7845	7	-32	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTCCTTCTCCGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	87565518	87561877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_87563486_87564574_87564735_87565355
ENSMUSG00000024150.13_12	chr17	-	643	3	FSM	ENSMUSG00000024150.13	ENST00000444761.6	660	3	10	7	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAAGCCACATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	87590897	87563218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87563486_87564574_87564735_87590681
ENSMUSG00000024150.13_13	chr17	-	548	3	FSM	ENSMUSG00000024150.13	ENST00000649435.1	562	3	7	7	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGAAGCCACATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	87565479	87563218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87563483_87564574_87564735_87565355
ENSMUSG00000024150.13_17	chr17	-	375	2	FSM	ENSMUSG00000024150.13	ENST00000409147.1	391	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGGTCAAGGAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	87590898	87564576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87564735_87590681
ENSMUSG00000024150.13_3	chr17	-	2002	5	FSM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAAAGCAAGCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87573329	87562097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568_87571794_87573262
ENSMUSG00000024150.13_4	chr17	-	1933	4	ISM	ENSMUSG00000024150.13	ENSMUST00000144236.9	2017	5	1541	12	1511	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAAAGCAAGCAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87571791	87562097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_87563486_87564574_87564735_87565355_87565518_87571568
ENSMUSG00000024151.14_0	chr17	+	3270	16	FSM	ENSMUSG00000024151.14	ENSMUST00000024967.14	3283	16	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGGGGGTACCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	87979769	88031140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87980235_87985635_87985791_87987227_87987507_87989958_87990106_87992864_87993015_87993723_87993858_87996369_87996570_88003922_88004033_88014609_88014734_88015879_88016031_88020056_88020155_88024882_88025129_88026028_88026234_88026715_88026964_88028310_88028487_88030758
ENSMUSG00000024158.18_0	chr17	+	1176	9	FSM	ENSMUSG00000024158.18	ENSMUST00000118788.8	1191	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACCTCTGCTTATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25069473	25083419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25069643_25071704_25071881_25072605_25072671_25075611_25075730_25076489_25076599_25079919_25080024_25080286_25080389_25082650_25082731_25083166
ENSMUSG00000024160.17_0	chr17	+	1619	7	FSM	ENSMUSG00000024160.17	ENSMUST00000117890.8	1641	7	12	10	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25105628	25111113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25105735_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUSG00000024160.17_2	chr17	+	1928	7	FSM	ENSMUSG00000024160.17	ENSMUST00000120943.8	1949	7	9	12	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGCCCAAGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25105662	25111111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110333
ENSMUSG00000024160.17_3	chr17	+	1994	7	FSM	ENSMUSG00000024160.17	ENSMUST00000068508.13	2004	7	0	10	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCCAAGCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25105653	25111113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25106080_25106753_25106892_25109256_25109435_25109541_25109730_25109806_25109910_25109984_25110111_25110278
ENSMUSG00000024163.18_0	chr17	-	888	3	Antisense	novelGene_ENSMUSG00000038880.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCGCTTCAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	25115263	25114119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_-_25114459_25114631_25114677_25114759
ENSMUSG00000024163.18_11	chr17	-	5377	31	FSM	ENSMUSG00000024163.18	ENSMUST00000121787.8	5431	31	47	7	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTACTTTTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25155894	25116513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_13	chr17	-	5412	31	FSM	ENSMUSG00000024163.18	ENSMUST00000115228.9	5424	31	5	7	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTACTTTTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25155863	25116513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125147_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_15	chr17	-	5533	32	FSM	ENSMUSG00000024163.18	ENSMUST00000088345.12	5543	32	3	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTACTTTTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25155939	25116513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_21	chr17	-	5494	31	NIC	ENSMUSG00000024163.18	novel	5543	32	NA	NA	-9	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTACTTTTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25155912	25116513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25131721_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_26	chr17	-	5402	31	NNC	ENSMUSG00000024163.18	novel	5431	31	NA	NA	-12	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTACTTTTGTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	25155915	25116513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119467_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25128123_25128136_25131721_25131841_25132503_25132607_25133432_25133680_25137061_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_4	chr17	-	5580	32	FSM	ENSMUSG00000024163.18	ENSMUST00000115229.10	5603	32	14	9	-3	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCGCACAAGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25155937	25116488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25131709_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25139445_25139470_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024163.18_5	chr17	-	5550	31	FSM	ENSMUSG00000024163.18	ENSMUST00000178969.8	5579	31	23	6	6	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACAAGGGTTTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25155928	25116485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25118044_25118118_25118269_25118369_25118550_25118648_25118688_25118809_25118924_25119135_25119308_25119471_25119621_25119761_25119830_25119912_25119994_25120079_25120200_25120313_25120504_25120578_25120762_25121251_25121418_25121977_25122137_25122262_25122359_25122898_25123026_25123622_25123794_25123880_25123938_25124141_25124273_25125120_25125203_25125782_25125936_25126302_25126361_25127384_25127403_25131709_25131841_25132503_25132607_25133432_25133680_25136968_25137114_25142789_25142882_25143120_25143192_25146802_25146924_25155510
ENSMUSG00000024165.10_0	chr17	-	2652	5	FSM	ENSMUSG00000024165.10	ENSMUST00000024981.9	2672	5	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1613	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTATCTGGTGCCAATA	NA	NA	NA	NA	NA	NA	NA	NA	25179650	25161450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25163653_25164553_25164603_25167611_25167755_25174991_25175141_25179541
ENSMUSG00000024169.17_0	chr17	+	6931	29	FSM	ENSMUSG00000024169.17	ENSMUST00000142000.9	6942	29	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGTTCTTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25235062	25315654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613
ENSMUSG00000024169.17_1	chr17	+	5477	30	FSM	ENSMUSG00000024169.17	ENSMUST00000024983.12	5489	30	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTTAGTTCTCTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	25235369	25318454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25235879_25237734_25237913_25239491_25239714_25244523_25244646_25244777_25244921_25247777_25247954_25251058_25251151_25252056_25252164_25252859_25253006_25254676_25254881_25255244_25255318_25255931_25256024_25264022_25264151_25264478_25264597_25267373_25267505_25269247_25269417_25270745_25270878_25274531_25274732_25305816_25305995_25306846_25307038_25307502_25307599_25307773_25307907_25308372_25308517_25309615_25309745_25309867_25310051_25311262_25311470_25311741_25311955_25312036_25312204_25313613_25313756_25317702
ENSMUSG00000024170.16_0	chr17	-	3508	21	FSM	ENSMUSG00000024170.16	ENSMUST00000115181.9	3530	21	10	12	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACACACAGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	25334931	25318555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25319095_25320272_25320389_25320613_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324818_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910_25334260_25334386
ENSMUSG00000024170.16_7	chr17	-	2271	18	FSM	ENSMUSG00000024170.16	ENST00000262319.11	2284	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTGACATGTGAGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	25334246	25320623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25320679_25320984_25321085_25321610_25321703_25322553_25322746_25323580_25323653_25323781_25323899_25324057_25324150_25324319_25324409_25324703_25324804_25324962_25325043_25325745_25325883_25325962_25326105_25326300_25326370_25329200_25329304_25329680_25329829_25330089_25330159_25331953_25332232_25333910
ENSMUSG00000024173.12_0	chr17	-	1129	5	FSM	ENSMUSG00000024173.12	ENSMUST00000153118.2	1156	5	18	9	18	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCAGCTGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	25564483	25562227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25562558_25562629_25562794_25563624_25563891_25564023_25564190_25564280
ENSMUSG00000024173.12_2	chr17	-	723	4	FSM	ENSMUSG00000024173.12	ENST00000211076.5	736	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTCTGAGTCACATC	NA	NA	NA	NA	NA	NA	NA	NA	25564159	25562404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25562558_25562629_25562794_25563624_25563891_25564019
ENSMUSG00000024174.10_0	chr17	-	3468	16	ISM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	1683	5	1683	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTGTAAAAATTAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56017895	55958955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838
ENSMUSG00000024174.10_1	chr17	-	3518	17	FSM	ENSMUSG00000024174.10	ENSMUST00000086876.7	3523	17	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTGTAAAAATTAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56019578	55958955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_55960519_55961766_55961873_55969462_55969555_55971316_55971406_55972647_55972784_55973411_55973618_55976739_55976897_55979830_55979894_55981051_55981141_55994788_55994959_55999721_55999878_56002026_56002318_56005456_56005588_56006991_56007107_56013105_56013153_56017838_56017907_56019539
ENSMUSG00000024175.3_0	chr17	+	1299	6	FSM	ENSMUSG00000024175.3	ENST00000559466.1	1316	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGACTGGGGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	25690719	25695504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25691230_25692709_25692781_25693089_25693201_25693593_25693837_25694532_25694688_25695295
ENSMUSG00000024176.11_0	chr17	-	2979	3	FSM	ENSMUSG00000024176.11	ENSMUST00000025003.10	3000	3	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAGCATGTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25789645	25784871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25787056_25787801_25788035_25789083
ENSMUSG00000024176.11_1	chr17	-	922	2	FSM	ENSMUSG00000024176.11	ENSMUST00000173447.2	928	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	GTAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25789654	25787683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25788035_25789083
ENSMUSG00000024177.10_0	chr17	-	987	5	FSM	ENSMUSG00000024177.10	ENSMUST00000025007.7	1006	5	9	10	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGAAATGGTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	26314567	26310717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26311127_26312590_26312704_26312832_26312935_26313110_26313245_26314338
ENSMUSG00000024180.15_0	chr17	+	3452	13	FSM	ENSMUSG00000024180.15	ENSMUST00000025010.14	3464	13	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAAATGAGTGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26332293	26342220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26332542_26335732_26335908_26335992_26336201_26336384_26336513_26336712_26336982_26337083_26337404_26337835_26337927_26338006_26338131_26338372_26338510_26339257_26339437_26339512_26339660_26340513_26340631_26340911
ENSMUSG00000024181.10_0	chr17	+	1057	5	FSM	ENSMUSG00000024181.10	ENSMUST00000025014.10	1068	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26342482	26345585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344451_26344539_26345244
ENSMUSG00000024181.10_13	chr17	+	985	5	FSM	ENSMUSG00000024181.10	ENSMUST00000127647.3	1002	5	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGGAGTCCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26342532	26345585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26342824_26343529_26343683_26344230_26344366_26344473_26344539_26345244
ENSMUSG00000024182.17_0	chr17	+	3757	11	FSM	ENSMUSG00000024182.17	ENSMUST00000074370.10	3777	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCCTTGGATATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26357673	26414777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26358016_26361591_26362551_26392613_26392755_26401463_26401561_26403150_26403289_26406677_26407196_26407547_26407719_26408959_26409206_26411489_26411598_26412912_26413081_26413908
ENSMUSG00000024186.16_0	chr17	+	1157	12	FSM	ENSMUSG00000024186.16	ENST00000359740.6	1178	12	13	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGACAAAGCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	26422280	26429495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26422367_26422435_26422487_26422551_26422679_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430
ENSMUSG00000024186.16_1	chr17	+	1196	13	FSM	ENSMUSG00000024186.16	ENST00000316163.9	1209	13	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGACAAAGCGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	26422273	26429495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26422367_26422435_26422487_26422551_26422659_26423305_26423358_26423460_26423520_26423824_26423902_26424081_26424186_26426300_26426432_26426519_26426634_26426732_26426849_26426965_26427054_26427137_26427277_26429430
ENSMUSG00000024187.16_0	chr17	-	3696	13	FSM	ENSMUSG00000024187.16	ENSMUST00000114988.8	3714	13	7	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAGAAGACAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	26463190	26430806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462979
ENSMUSG00000024187.16_15	chr17	-	2772	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234262.2	2774	13	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCTGGATGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26463142	26431666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444901_26444998_26462979
ENSMUSG00000024187.16_26	chr17	-	2821	13	FSM	ENSMUSG00000024187.16	ENSMUST00000234687.2	2833	13	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	26463177	26431684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26444885_26444998_26462963
ENSMUSG00000024187.16_33	chr17	-	2742	12	FSM	ENSMUSG00000024187.16	ENSMUST00000234175.2	2749	12	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCAGCGTGAGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	26463210	26431684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462963
ENSMUSG00000024187.16_45	chr17	-	2612	12	FSM	ENSMUSG00000024187.16	ENSMUST00000118487.8	2629	12	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCCAGCGTGAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	26463098	26431686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26432692_26432777_26432881_26433301_26433458_26433625_26433702_26434158_26434300_26435162_26435293_26435532_26435666_26436267_26436405_26437097_26437293_26437608_26437726_26439254_26439555_26462979
ENSMUSG00000024188.17_0	chr17	+	1685	9	FSM	ENSMUSG00000024188.17	ENSMUST00000025023.15	1700	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATTATATGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	26471878	26499687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934
ENSMUSG00000024188.17_16	chr17	+	1326	10	ISM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	952	1	952	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTGGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	26472949	26500942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024188.17_5	chr17	+	4918	10	FSM	ENSMUSG00000024188.17	ENSMUST00000114976.9	4934	10	12	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTTGTCAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26471936	26504474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26472066_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024188.17_7	chr17	+	1394	11	FSM	ENSMUSG00000024188.17	ENST00000629543.2	1397	11	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTGTTGGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	26471999	26500942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26472066_26472947_26473019_26474004_26474100_26476899_26476999_26485256_26485368_26486188_26486333_26494647_26494825_26496519_26496609_26498306_26498337_26498934_26499103_26500598
ENSMUSG00000024190.8_0	chr17	-	1978	4	FSM	ENSMUSG00000024190.8	ENSMUST00000025025.7	1990	4	6	6	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGCTCTCCGTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26727487	26724569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26725625_26725958_26726179_26726547_26726694_26726930
ENSMUSG00000024191.16_0	chr17	+	1079	6	FSM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATAGAGTGGTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	27000052	27011489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27000151_27002418_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUSG00000024191.16_6	chr17	+	982	5	ISM	ENSMUSG00000024191.16	ENSMUST00000015725.16	1098	6	2374	10	2347	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTAATAGAGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	27002413	27011485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_27002512_27005670_27005763_27008668_27008771_27009899_27010019_27010914
ENSMUSG00000024193.9_0	chr17	+	2512	15	FSM	ENSMUSG00000024193.9	ENSMUST00000073724.7	2522	15	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTTTGAAAGATTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	27152029	27156876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155744_27155840_27156027_27156109_27156253
ENSMUSG00000024193.9_2	chr17	+	2226	15	FSM	ENSMUSG00000024193.9	ENST00000374516.8	2252	15	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGATAAATAAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	27152318	27156845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27152509_27153167_27153343_27153427_27153510_27153604_27153701_27154027_27154129_27154222_27154372_27154513_27154610_27154723_27154793_27154892_27155017_27155097_27155166_27155260_27155366_27155485_27155655_27155710_27155840_27156027_27156109_27156253
ENSMUSG00000024194.17_0	chr17	-	722	7	FSM	ENSMUSG00000024194.17	ENSMUST00000025027.10	741	7	18	1	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	27158525	27156946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158290_27158343_27158424
ENSMUSG00000024194.17_2	chr17	-	655	6	FSM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	27158510	27156946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857_27158067_27158424
ENSMUSG00000024194.17_3	chr17	-	572	5	ISM	ENSMUSG00000024194.17	ENSMUST00000114935.9	662	6	448	0	-2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTTTCTCTGTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	27158069	27156946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_27157151_27157391_27157442_27157545_27157592_27157700_27157761_27157857
ENSMUSG00000024194.17_5	chr17	-	354	4	FSM	ENSMUSG00000024194.17	ENST00000488478.5	370	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGGAAATCCCCCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	27158058	27157103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27157151_27157545_27157592_27157700_27157761_27157857
ENSMUSG00000024197.11_0	chr17	-	3640	8	FSM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCCTGTAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	56597511	56584480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793_56594877_56597453
ENSMUSG00000024197.11_1	chr17	-	3577	7	ISM	ENSMUSG00000024197.11	ENSMUST00000019726.8	3645	8	2640	5	-1222	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATGCCTGTAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	56594871	56584480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591431_56593212_56593296_56593447_56593647_56594793
ENSMUSG00000024197.11_6	chr17	-	1204	6	FSM	ENSMUSG00000024197.11	ENST00000592528.5	1220	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGGGAGAAGGTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	56593641	56586737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56587074_56587741_56587868_56588406_56588607_56591132_56591394_56593208_56593296_56593447
ENSMUSG00000024201.13_0	chr17	+	4566	23	FSM	ENSMUSG00000024201.13	ENSMUST00000025036.11	4577	23	6	5	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCCACCTGGTCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	56633079	56709859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56633230_56658632_56658798_56659975_56660152_56660524_56660640_56662862_56663057_56676122_56676173_56679423_56679528_56682853_56682992_56693082_56693280_56696258_56696343_56696484_56696673_56700717_56701107_56701768_56701890_56703203_56703383_56703496_56703693_56703901_56703979_56704122_56704179_56704301_56704411_56706380_56706567_56706689_56706855_56706948_56707069_56708222_56708316_56708545
ENSMUSG00000024205.8_0	chr11	+	370	1	FSM	ENSMUSG00000024205.8	ENSMUST00000136893.3	311	1	-32	-27	-32	27	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76492112	76492482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_76492100_76492500
ENSMUSG00000024206.16_0	chr17	-	3268	17	FSM	ENSMUSG00000024206.16	ENSMUST00000086801.7	3283	17	9	6	4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACCTGGTGTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57138004	57082902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57084075_57084431_57084475_57084838_57084993_57086879_57087089_57087754_57087905_57089250_57089349_57090606_57090762_57091299_57091413_57091647_57091767_57092296_57092413_57093608_57093729_57094578_57094761_57110477_57110740_57111325_57111397_57112357_57112448_57115233_57115326_57137882
ENSMUSG00000024208.17_0	chr17	-	484	4	FSM	ENSMUSG00000024208.17	ENSMUST00000025045.15	500	4	10	6	-4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCCTGGTTTGGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	27352880	27341642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27341815_27344120_27344191_27344857_27344933_27352713
ENSMUSG00000024210.4_1	chr17	-	2327	6	FSM	ENSMUSG00000024210.4	ENSMUST00000025046.4	2342	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTCTTTCTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	27386760	27362944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27364297_27367444_27367621_27368894_27369071_27370018_27370218_27376510_27376788_27386613
ENSMUSG00000024212.10_0	chr17	-	3602	12	FSM	ENSMUSG00000024212.10	ENSMUST00000025053.10	3636	12	30	4	30	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGGGTGGCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	57242385	57199614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57201591_57201666_57201739_57201830_57201903_57201998_57202099_57203208_57203318_57204379_57204468_57206768_57207297_57209562_57209689_57212711_57212856_57226899_57226983_57233991_57234173_57242262
ENSMUSG00000024213.15_0	chr17	-	2202	5	FSM	ENSMUSG00000024213.15	ENSMUST00000025050.13	2223	5	12	9	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTTGCTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27842457	27798364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27842060
ENSMUSG00000024213.15_1	chr17	-	1490	6	FSM	ENSMUSG00000024213.15	ENSMUST00000231742.2	1523	6	21	12	21	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTGAAAAGCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	27816168	27798372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27799329_27799749_27799929_27800981_27801067_27802185_27802231_27815697_27815809_27816054
ENSMUSG00000024217.11_0	chr17	+	973	7	FSM	ENSMUSG00000024217.11	ENSMUST00000232873.2	984	7	4	7	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGTGTCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28057127	28070935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28057234_28058947_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUSG00000024217.11_4	chr17	+	754	6	FSM	ENSMUSG00000024217.11	ENSMUST00000071006.9	758	6	0	4	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGTGTCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28059060	28070935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28059144_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUSG00000024217.11_6	chr17	+	853	6	FSM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	27	2	27	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGTGTCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28059155	28070935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28059338_28059437_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUSG00000024217.11_7	chr17	+	671	5	ISM	ENSMUSG00000024217.11	ENSMUST00000233657.2	882	6	309	2	309	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAAGCGTGTCCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	28059437	28070935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_28059481_28061243_28061353_28064156_28064247_28066926_28067032_28070611
ENSMUSG00000024218.14_0	chr17	-	2187	6	FSM	ENSMUSG00000024218.14	ENSMUST00000114848.8	2207	6	14	6	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28128202	28120101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474_28127218_28127754
ENSMUSG00000024218.14_3	chr17	-	1213	5	FSM	ENSMUSG00000024218.14	ENSMUST00000025057.5	1220	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACAGGGTTTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	28126691	28120101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28120764_28121501_28121599_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024218.14_6	chr17	-	514	4	FSM	ENSMUSG00000024218.14	ENST00000420584.3	523	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGGGAGACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	28126622	28120634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28120764_28122074_28122163_28124235_28124385_28126474
ENSMUSG00000024219.17_0	chr17	+	5787	25	FSM	ENSMUSG00000024219.17	ENSMUST00000114842.9	5819	25	24	8	-3	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGCCATAGCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	28128303	28281741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28128621_28193878_28193960_28195534_28195692_28197400_28197464_28204039_28204337_28205225_28205302_28205524_28205627_28205718_28205821_28207693_28207891_28210281_28210375_28214907_28215029_28226822_28227407_28257053_28257121_28261543_28261651_28269539_28269639_28270470_28270624_28270698_28270807_28271612_28271778_28272863_28272990_28273265_28273338_28273643_28273731_28276300_28276439_28277263_28277435_28278267_28278366_28279535
ENSMUSG00000024220.15_0	chr17	+	2850	14	FSM	ENSMUSG00000024220.15	ENSMUST00000073534.10	2864	14	6	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCACCTGGGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28396108	28424852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ENSMUSG00000024220.15_11	chr17	+	2449	13	ISM	ENSMUSG00000024220.15	ENSMUST00000233613.2	2491	14	3619	9	3619	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCACCTGGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28408779	28424851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ENSMUSG00000024220.15_4	chr17	+	2696	15	FSM	ENSMUSG00000024220.15	ENSMUST00000002318.8	2710	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCACCTGGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28396398	28424851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28396500_28398530_28398668_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ENSMUSG00000024220.15_6	chr17	+	2361	13	FSM	ENSMUSG00000024220.15	ENSMUST00000233904.2	2368	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCACCTGGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28396431	28424851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28396500_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28423428_28423543_28424084
ENSMUSG00000024220.15_9	chr17	+	2482	14	FSM	ENSMUSG00000024220.15	ENSMUST00000233613.2	2491	14	0	9	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCCACCTGGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	28405160	28424851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28405185_28408770_28408927_28413939_28414021_28414121_28414200_28416747_28416948_28419084_28419202_28419412_28419489_28419981_28420108_28420234_28420415_28421088_28421323_28421408_28421573_28422059_28422225_28423428_28423543_28424084
ENSMUSG00000024222.18_0	chr17	-	3527	11	FSM	ENSMUSG00000024222.18	ENSMUST00000079413.11	3543	11	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGTTCATGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28705107	28618067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28704925
ENSMUSG00000024222.18_2	chr17	-	3843	14	FSM	ENSMUSG00000024222.18	ENSMUST00000114792.8	3858	14	7	8	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGGTTTTTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	28736491	28618078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_28620126_28621582_28621823_28625058_28625245_28629483_28629568_28631007_28631099_28634842_28635000_28647325_28647441_28648194_28648338_28656965_28657111_28659901_28660028_28706878_28706978_28718339_28718393_28726209_28726444_28736368
ENSMUSG00000024227.15_0	chr17	-	943	7	FSM	ENSMUSG00000024227.15	ENST00000412514.2	971	7	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATAAAACAGAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	59261484	59187625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_59187738_59190899_59191087_59192854_59192898_59195002_59195161_59229563_59229737_59239408_59239524_59261329
ENSMUSG00000024228.13_3	chr17	-	1329	6	FSM	ENSMUSG00000024228.13	ENST00000507423.1	1344	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATGAAAAATACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	59318241	59309179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_59309287_59310323_59310524_59313498_59313613_59314618_59314787_59316849_59317440_59318091
ENSMUSG00000024231.16_0	chr18	+	3005	22	FSM	ENSMUSG00000024231.16	ENST00000374748.5	3020	22	6	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAATGAGACATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3383229	3435447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_3383398_3383554_3383660_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUSG00000024231.16_3	chr18	+	3810	21	FSM	ENSMUSG00000024231.16	ENSMUST00000162301.8	3828	21	9	9	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCTGATACCAATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3383240	3436368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_3383398_3399845_3399987_3405684_3405788_3414129_3414225_3417534_3417641_3418563_3418647_3419346_3419444_3419531_3419643_3421202_3421366_3423468_3423594_3424449_3424558_3425511_3425572_3426094_3426224_3426316_3426404_3426757_3426911_3427162_3427241_3429569_3429637_3430911_3431115_3431483_3431586_3433993_3434111_3434843
ENSMUSG00000024232.3_0	chr18	+	5047	3	FSM	ENSMUSG00000024232.3	ENSMUST00000025075.3	5074	3	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCACCCTGATTTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	3507944	3516399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_3508286_3511256_3511545_3511981
ENSMUSG00000024232.3_1	chr18	+	1219	3	FSM	ENSMUSG00000024232.3	ENST00000375533.6	1242	3	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATTAAAACTTCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	3508147	3512773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_3508290_3511259_3511545_3511981
ENSMUSG00000024234.8_0	chr18	+	2635	9	FSM	ENSMUSG00000024234.8	ENSMUST00000025077.7	2651	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATTGTGATAACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	4375601	4397324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_4375779_4379568_4379742_4380653_4380888_4383188_4383414_4386170_4386383_4386952_4387180_4394973_4395067_4395155_4395230_4396104
ENSMUSG00000024235.12_0	chr18	-	2568	8	FSM	ENSMUSG00000024235.12	ENSMUST00000025078.10	2569	8	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGGGATTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	4353014	4331326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_4332437_4333817_4334065_4334616_4334770_4339496_4339604_4340546_4340809_4343021_4343190_4348980_4349339_4352851
ENSMUSG00000024236.19_0	chr18	+	7895	38	FSM	ENSMUSG00000024236.19	ENSMUST00000126977.8	7907	38	3	9	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCCAATTCATTGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	4920542	5119282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_4920875_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5060514_5060611_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ENSMUSG00000024236.19_14	chr18	+	6524	35	ISM	ENSMUSG00000024236.19	ENSMUST00000143254.8	6594	36	35506	6	35506	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATCAGTTCACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4957231	5119293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_4957306_4977790_4977879_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ENSMUSG00000024236.19_16	chr18	+	7619	38	FSM	ENSMUSG00000024236.19	ENSMUST00000210707.2	7633	38	0	14	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAATCCCAATTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	5035165	5119277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_5035227_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5054017_5054099_5055979_5056850_5057274_5057440_5058124_5058160_5058712_5058775_5059229_5059370_5060514_5060611_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ENSMUSG00000024236.19_7	chr18	+	6584	36	FSM	ENSMUSG00000024236.19	ENSMUST00000143254.8	6594	36	4	6	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATCAGTTCACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4921729	5119293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_4921775_4957216_4957306_4977790_4977879_5037107_5037166_5040147_5040240_5046588_5046647_5046763_5046916_5048884_5049495_5058124_5058160_5058712_5058775_5059229_5059370_5062161_5062406_5063193_5063771_5064470_5064691_5073880_5074005_5082782_5082931_5086534_5086625_5086709_5086797_5088636_5088815_5090786_5090960_5092844_5093001_5094537_5094675_5095171_5095320_5095435_5095582_5097426_5097603_5098907_5099053_5099433_5099711_5103574_5103727_5105765_5105872_5106663_5106872_5108574_5108709_5114530_5114687_5115977_5116122_5116972_5117098_5118099_5118256_5118345
ENSMUSG00000024238.16_0	chr18	+	5790	8	FSM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTCTGTTGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5591868	5775461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_5591968_5705042_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ENSMUSG00000024238.16_3	chr18	+	5692	7	ISM	ENSMUSG00000024238.16	ENSMUST00000025081.13	5801	8	113178	6	113178	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTCTGTTGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	5705041	5775461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_5705244_5748693_5748856_5758964_5759168_5761327_5761434_5766220_5768026_5770383_5770565_5772428
ENSMUSG00000024240.14_1	chr18	-	2891	15	FSM	ENSMUSG00000024240.14	ENST00000263062.8	2906	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCGCAGCTCTCGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	6490874	6437113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_6437308_6439591_6439956_6440048_6440191_6440975_6441045_6441121_6441244_6448904_6449258_6450068_6450218_6450296_6450387_6450465_6450640_6452232_6452393_6453508_6453658_6454186_6454394_6455188_6455335_6462831_6462992_6490462
ENSMUSG00000024240.14_14	chr18	-	833	2	FSM	ENSMUSG00000024240.14	ENST00000469059.2	856	2	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGAATCTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6490803	6488898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_6489391_6490462
ENSMUSG00000024241.8_0	chr17	-	8411	22	FSM	ENSMUSG00000024241.8	ENSMUST00000068714.7	8436	22	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAAATGATTATTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	80787384	80701190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80706102_80707169_80707289_80714119_80714388_80715674_80715792_80715996_80716170_80721027_80721146_80722371_80722535_80726437_80726558_80727691_80727915_80730110_80730215_80730544_80730668_80731558_80731641_80740925_80741582_80742323_80742452_80752858_80752958_80753030_80753142_80756686_80756831_80759409_80759620_80761184_80761350_80762480_80762613_80767350_80767477_80787265
ENSMUSG00000024242.16_0	chr17	-	4068	33	FSM	ENSMUSG00000024242.16	ENSMUST00000234133.2	4088	33	16	4	16	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCTGTTGCGTAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	81035437	80887949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80889365_80889990_80890047_80892149_80892221_80900350_80900444_80900519_80900589_80904981_80905154_80909621_80909726_80911411_80911471_80913195_80913314_80913388_80913450_80917180_80917261_80919459_80919545_80920896_80920939_80921343_80921457_80922445_80922606_80923914_80923958_80925722_80925777_80925985_80926025_80931484_80931544_80937843_80937903_80944148_80944228_80951560_80951672_80951755_80951838_80951920_80951984_80952142_80952275_80956955_80957029_80958513_80958557_80961290_80961339_80961840_80961897_80963285_80963351_80971420_80971512_80988296_80988355_81035222
ENSMUSG00000024246.10_0	chr17	-	1821	10	FSM	ENSMUSG00000024246.10	ENSMUST00000025093.6	1833	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTATAATTTGCTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	81372488	81333764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_81334400_81340060_81340170_81344926_81345042_81345533_81345606_81351528_81351617_81357365_81357419_81360323_81360402_81361552_81361963_81363203_81363340_81372363
ENSMUSG00000024247.15_0	chr17	+	2383	8	FSM	ENSMUSG00000024247.15	ENST00000294964.6	2398	8	9	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTGTGACAAATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	83522716	83532480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211_83531386_83531620_83532330_83532377
ENSMUSG00000024247.15_6	chr17	+	2411	7	FSM	ENSMUSG00000024247.15	ENSMUST00000170794.8	2446	7	26	9	26	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCTCCCCTCCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	83522746	83532490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_83523534_83527462_83527586_83528394_83528667_83529218_83529299_83529554_83529660_83531211_83531386_83531620
ENSMUSG00000024248.15_0	chr17	-	1066	3	FSM	ENSMUSG00000024248.15	ENSMUST00000025095.9	1076	3	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	5314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTTTGTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83821750	83809347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_83810167_83811528_83811658_83821632
ENSMUSG00000024248.15_5	chr17	-	1102	4	FSM	ENSMUSG00000024248.15	ENSMUST00000167741.9	1129	4	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTGGAATGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	83821741	83809371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_83810167_83811359_83811429_83811528_83811658_83821632
ENSMUSG00000024251.11_1	chr17	-	7733	37	ISM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	1634	9	1634	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACAATAAAACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	84771910	84497512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784
ENSMUSG00000024251.11_2	chr17	-	7775	38	FSM	ENSMUSG00000024251.11	ENSMUST00000047524.10	7784	38	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACAATAAAACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	84773544	84497512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_84499760_84500727_84500898_84530101_84530234_84533315_84533470_84536564_84536638_84537169_84537289_84538218_84538593_84559761_84559857_84580133_84580253_84617314_84617484_84641453_84641586_84644220_84644311_84693938_84694031_84700787_84700911_84702490_84702605_84705622_84705756_84723705_84723816_84730459_84730618_84733566_84733726_84736113_84736251_84736496_84736633_84739606_84739815_84742983_84743139_84744022_84744147_84747422_84747546_84748366_84748523_84749088_84749241_84751245_84751938_84753932_84754154_84755372_84755468_84759136_84759325_84762036_84762086_84762299_84762333_84762446_84762596_84765267_84765399_84766233_84766329_84771784_84771930_84773521
ENSMUSG00000024253.10_0	chr17	+	1344	13	FSM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCAACATCTAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	84933927	84963010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84934005_84935712_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ENSMUSG00000024253.10_9	chr17	+	1271	12	ISM	ENSMUSG00000024253.10	ENSMUST00000025101.10	1354	13	1786	5	1786	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAACATCTAAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	84935709	84963011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_84935831_84939063_84939099_84940946_84941017_84943659_84943749_84950299_84950487_84951532_84951602_84952146_84952225_84954672_84954750_84955073_84955145_84956643_84956742_84957136_84957230_84962728
ENSMUSG00000024258.5_0	chr18	+	1010	4	FSM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	5	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31922216	31929754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31922298_31924892_31925074_31928340_31928437_31929102
ENSMUSG00000024258.5_3	chr18	+	931	3	ISM	ENSMUSG00000024258.5	ENSMUST00000025106.5	1015	4	2679	0	2678	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAATTGTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31924890	31929754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_31925074_31928340_31928437_31929102
ENSMUSG00000024259.10_0	chr18	-	4350	8	FSM	ENSMUSG00000024259.10	ENSMUST00000060396.7	4371	8	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAGCCAATATATATG	NA	NA	NA	NA	NA	NA	NA	NA	31742939	31713225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_31716823_31727629_31727688_31730091_31730149_31733184_31733286_31735775_31735854_31738805_31738864_31740274_31740318_31742581
ENSMUSG00000024260.15_1	chr18	+	4023	21	FSM	ENSMUSG00000024260.15	ENSMUST00000235017.2	4030	21	7	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGAGCAGTTTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	31767430	31856114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31767543_31769034_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31822450_31822556_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024260.15_7	chr18	+	3800	19	FSM	ENSMUSG00000024260.15	ENST00000259235.7	3811	19	10	1	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGAGCAGTTTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31769041	31856115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31769153_31780093_31780330_31781186_31781346_31782597_31782710_31783543_31783669_31786554_31786680_31799393_31799542_31799688_31799780_31799957_31800063_31807407_31807550_31810408_31810531_31813421_31813725_31815059_31815238_31831574_31831934_31844250_31844500_31844661_31844788_31848393_31848498_31853709_31853824_31855224
ENSMUSG00000024268.17_0	chr18	-	3973	13	FSM	ENSMUSG00000024268.17	ENSMUST00000115816.3	3995	13	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGTTTAAAAAAAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	25887025	25610695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946_25638073_25670733_25670813_25812469_25812553_25886398
ENSMUSG00000024268.17_1	chr18	-	2865	13	FSM	ENSMUSG00000024268.17	ENSMUST00000025117.14	2899	13	34	0	-14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTGGGAGCCGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	25886773	25611524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_25612769_25619850_25620023_25624137_25624282_25629278_25629363_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946_25638073_25670763_25670813_25812469_25812553_25886398
ENSMUSG00000024268.17_2	chr18	-	2452	13	FSM	ENSMUSG00000024268.17	ENSMUST00000223704.2	2492	13	3	37	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAATAAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25887037	25612171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_25612769_25619850_25620023_25624197_25624282_25629278_25629360_25630521_25630588_25634257_25634408_25635989_25636138_25637195_25637340_25637545_25637626_25637946_25638076_25670733_25670813_25812469_25812553_25886398
ENSMUSG00000024269.12_0	chr18	-	4139	7	FSM	ENSMUSG00000024269.12	ENSMUST00000115817.3	4159	7	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAACAAAATCAGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	25302055	25269104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_25272197_25273502_25273664_25274577_25274695_25282170_25282300_25284256_25284345_25291300_25291381_25301583
ENSMUSG00000024270.12_0	chr18	-	3866	10	FSM	ENSMUSG00000024270.12	ENSMUST00000070726.10	3882	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCAGGCCTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	24736865	24712944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24714135_24715373_24715565_24717076_24717158_24718182_24718561_24722803_24722910_24729322_24729542_24730799_24730970_24732286_24732471_24733871_24734697_24736343
ENSMUSG00000024271.9_0	chr18	+	3452	22	FSM	ENSMUSG00000024271.9	ENSMUST00000234266.2	3466	22	8	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAATAAGAGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	24737025	24772558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_17	chr18	+	2481	19	FSM	ENSMUSG00000024271.9	ENSMUST00000025120.8	2497	19	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTGTCTGATTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24737035	24771867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24737190_24739913_24739993_24742686_24742758_24744969_24745127_24745504_24745583_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815_24765938_24767395_24767530_24767957_24768066_24771450
ENSMUSG00000024271.9_32	chr18	+	1697	15	FSM	ENSMUSG00000024271.9	ENST00000351393.10	1716	15	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAAAGGTAATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24744972	24765927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24752438_24752571_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815
ENSMUSG00000024271.9_34	chr18	+	1555	14	FSM	ENSMUSG00000024271.9	ENST00000542824.5	1584	14	17	12	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAAAGGTAATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	24744982	24765927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24745127_24747472_24747538_24748217_24748285_24748945_24749084_24750457_24750554_24752134_24752236_24755135_24755295_24755535_24755725_24758568_24758636_24759181_24759275_24759444_24759503_24760051_24760125_24764415_24764609_24765815
ENSMUSG00000024273.9_0	chr18	+	1047	5	FSM	ENSMUSG00000024273.9	ENSMUST00000097646.5	1065	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACCGAATGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	24603935	24610847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24604038_24604118_24604142_24606006_24606207_24608581_24608782_24610325
ENSMUSG00000024274.11_0	chr18	-	1584	3	FSM	ENSMUSG00000024274.11	ENSMUST00000115829.4	1592	3	2	6	2	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTCAGCTCTAAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24104842	24097880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24098891_24103988_24104159_24104438
ENSMUSG00000024276.8_0	chr18	+	5456	4	FSM	ENSMUSG00000024276.8	ENSMUST00000060762.6	5472	4	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGCAAACATTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24087765	24097718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24087919_24089395_24089911_24090111_24090254_24093072
ENSMUSG00000024277.15_0	chr18	+	3919	8	FSM	ENSMUSG00000024277.15	ENSMUST00000170802.8	3936	8	9	8	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTGTCTGGACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23885398	24026910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23885478_23905660_23905717_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUSG00000024277.15_2	chr18	+	4003	7	FSM	ENSMUSG00000024277.15	ENSMUST00000025127.5	4026	7	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGTTAAAATCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	23937052	24026903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23937279_23965909_23966038_23986710_23986857_23991000_23991215_24011000_24011141_24016594_24016754_24023913
ENSMUSG00000024283.16_0	chr18	+	2190	13	FSM	ENSMUSG00000024283.16	ENSMUST00000171042.8	2205	13	0	15	0	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7868831	7926490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917564_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_1	chr18	+	3060	14	FSM	ENSMUSG00000024283.16	ENSMUST00000074919.11	3070	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACATTTTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	7868859	7927067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_7869092_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_10	chr18	+	3065	13	FSM	ENSMUSG00000024283.16	ENSMUST00000092112.11	3094	13	24	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATAAAGCTACCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	7869516	7927514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_19	chr18	+	3366	13	ISM	ENSMUSG00000024283.16	ENST00000679398.1	3450	14	489	8	489	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAATCCTGTTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	7869989	7927604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_5	chr18	+	5202	14	FSM	ENSMUSG00000024283.16	ENSMUST00000167020.8	5208	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTATGGTGCAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7869196	7929022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_7869616_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024283.16_9	chr18	+	3438	14	FSM	ENSMUSG00000024283.16	ENST00000679398.1	3450	14	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAATCCTGTTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	7869504	7927604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_7869578_7869990_7870028_7871548_7871745_7901495_7901603_7905399_7905516_7905931_7906045_7910515_7910825_7916051_7916298_7917552_7917676_7918432_7918582_7920131_7920251_7921421_7921609_7921855_7921984_7926069
ENSMUSG00000024286.9_0	chr18	-	5737	10	FSM	ENSMUSG00000024286.9	ENSMUST00000053917.6	5757	10	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAATGTTAACCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	9450143	9312316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9386734_9386810_9449517
ENSMUSG00000024286.9_3	chr18	-	2464	9	FSM	ENSMUSG00000024286.9	ENSMUST00000234102.2	2505	9	29	12	29	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGAATAAAAAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	9449941	9315312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_9316673_9319408_9319572_9332783_9332951_9345193_9345314_9345413_9345472_9349387_9349424_9353406_9353508_9377793_9377829_9449517
ENSMUSG00000024287.9_0	chr18	+	4111	21	FSM	ENSMUSG00000024287.9	ENSMUST00000025137.9	4134	21	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACCAGAGCTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	9957919	9995480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_9958247_9959097_9959172_9959254_9959316_9960485_9960553_9962372_9962492_9963262_9963312_9963822_9963919_9968750_9968834_9970254_9970329_9975598_9975708_9977846_9977979_9984433_9984535_9986288_9986356_9986552_9986604_9986690_9986762_9987069_9987166_9987598_9987665_9989690_9989775_9992127_9992276_9992831_9992908_9993320
ENSMUSG00000024290.10_0	chr18	-	6420	33	FSM	ENSMUSG00000024290.10	ENSMUST00000067947.7	6440	33	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAAAACTTGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	10182035	10064410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10066052_10067470_10067679_10070218_10070481_10070621_10070701_10072831_10072921_10073114_10073186_10079114_10079275_10080350_10080540_10083121_10083211_10084317_10084412_10090812_10090979_10092128_10092224_10093907_10093978_10095412_10095598_10097482_10097644_10099256_10099408_10100921_10101029_10104073_10104321_10104417_10104510_10106321_10106458_10112343_10112393_10116773_10116863_10119884_10119946_10122608_10122769_10129304_10129397_10131529_10131669_10132127_10132273_10134415_10134501_10136095_10136272_10140175_10140314_10140787_10140889_10150234_10150317_10181224
ENSMUSG00000024293.17_0	chr18	-	4528	11	FSM	ENSMUSG00000024293.17	ENSMUST00000025142.13	4545	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTAGTTCTCACTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	10610342	10566513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596442_10610025
ENSMUSG00000024293.17_16	chr18	-	2070	10	FSM	ENSMUSG00000024293.17	ENSMUST00000097670.10	2088	10	13	5	-7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGATAAATGTACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	10610116	10566615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10596338_10596442_10610025
ENSMUSG00000024293.17_22	chr18	-	2229	11	FSM	ENSMUSG00000024293.17	ENSMUST00000145320.2	2249	11	4	16	2	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATAAAATACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	10610105	10566645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10595675_10595876_10596338_10596442_10610025
ENSMUSG00000024293.17_3	chr18	-	4236	10	ISM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	13546	9	13546	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACTTGATACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	10596561	10566608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338
ENSMUSG00000024293.17_4	chr18	-	4317	11	FSM	ENSMUSG00000024293.17	ENST00000269214.10	4331	11	5	9	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACTTGATACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	10610102	10566608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10567647_10571954_10572143_10574874_10575019_10577000_10577091_10582054_10582187_10584247_10584363_10585977_10586042_10588438_10588551_10593745_10595876_10596338_10596562_10610021
ENSMUSG00000024294.15_0	chr18	+	10219	21	FSM	ENSMUSG00000024294.15	ENSMUST00000052838.11	10231	21	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATATGCTTTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	10725551	10818570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_10726534_10740982_10741155_10743268_10743399_10747355_10747461_10749322_10749390_10751822_10752028_10755503_10755688_10760803_10760949_10763188_10763323_10768123_10768232_10775528_10775727_10778148_10778301_10792894_10793028_10794477_10794565_10795689_10795852_10798351_10798534_10800055_10800249_10802260_10802340_10804686_10804801_10808033_10808135_10811984
ENSMUSG00000024298.16_0	chr17	-	10844	4	FSM	ENSMUSG00000024298.16	ENSMUST00000159086.10	10851	4	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGGTCTTTGGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	33007257	32984472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32994983_32996130_32996192_32996374_32996502_33007111
ENSMUSG00000024299.18_1	chr17	+	4042	25	FSM	ENSMUSG00000024299.18	ENSMUST00000087623.13	4043	25	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	33743177	33772741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33743233_33747257_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756065_33756150_33756252_33756399_33756873_33756918_33757041_33757148_33757237_33757385_33757544_33757687_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ENSMUSG00000024299.18_2	chr17	+	2533	3	FSM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	33743183	33749950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33743233_33747257_33747445_33747653
ENSMUSG00000024299.18_3	chr17	+	3983	24	ISM	ENSMUSG00000024299.18	ENSMUST00000087623.13	4043	25	4084	1	4044	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCTGCTCCTGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	33747261	33772741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_33747445_33747653_33748001_33749106_33749264_33750553_33750772_33756065_33756150_33756252_33756399_33756873_33756918_33757041_33757148_33757237_33757385_33757544_33757687_33762171_33762280_33762609_33762756_33762845_33762910_33763928_33764032_33764277_33764412_33764515_33764640_33767796_33767878_33767970_33768135_33768232_33768360_33768453_33768584_33769439_33769645_33769987_33770165_33770241_33770405_33772058
ENSMUSG00000024299.18_4	chr17	+	2480	2	ISM	ENSMUSG00000024299.18	ENSMUST00000234715.2	2533	3	4078	0	4044	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	33747261	33749950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_33747445_33747653
ENSMUSG00000024301.11_0	chr17	+	2596	11	FSM	ENSMUSG00000024301.11	ENSMUST00000078961.6	2631	11	22	13	22	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACGTAGAAATGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	27136086	27151544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27136260_27139770_27139906_27139993_27140094_27140780_27140835_27141649_27141698_27141878_27142277_27142982_27143763_27144415_27144707_27144799_27144874_27145193_27145270_27151077
ENSMUSG00000024302.17_0	chr18	+	6276	21	FSM	ENSMUSG00000024302.17	ENSMUST00000115832.4	6295	21	10	9	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACTATTATCTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	23548508	23792763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23788869
ENSMUSG00000024302.17_28	chr18	+	3150	19	FSM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTATTTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	23668218	23792730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23791661
ENSMUSG00000024302.17_40	chr18	+	3080	18	ISM	ENSMUSG00000024302.17	ENST00000681241.1	3152	19	10527	1	10527	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAATTATTTCTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	23678744	23792730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23786385_23786435_23791661
ENSMUSG00000024302.17_49	chr18	+	1656	7	FSM	ENSMUSG00000024302.17	ENST00000683876.1	1667	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTGTAACAGAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	23730501	23767335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23766274
ENSMUSG00000024302.17_7	chr18	+	3132	20	FSM	ENSMUSG00000024302.17	ENST00000598334.5	3146	20	9	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTGACTACTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	23548539	23792491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_23548683_23608172_23608300_23668218_23668287_23678742_23678824_23702618_23702833_23716140_23716227_23723245_23723401_23726028_23726135_23728515_23728683_23730490_23730616_23735647_23735732_23754443_23754532_23755023_23755122_23758138_23758253_23764388_23764486_23776203_23776364_23779253_23779344_23779944_23780111_23784572_23784706_23791661
ENSMUSG00000024304.15_0	chr18	-	4829	16	FSM	ENSMUSG00000024304.15	ENSMUST00000025166.14	4843	16	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGACTGGTTTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	16942295	16721939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16907564_16907677_16941391
ENSMUSG00000024304.15_5	chr18	-	3747	15	FSM	ENSMUSG00000024304.15	ENSMUST00000115850.2	3785	15	11	27	11	-27	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	16803115	16722106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_16723411_16734678_16734844_16755184_16755325_16757207_16757442_16757776_16758011_16760624_16760768_16762515_16762770_16765260_16765447_16766064_16766203_16773478_16773652_16776986_16777132_16779528_16779685_16781543_16781691_16783328_16783556_16803014
ENSMUSG00000024306.14_0	chr18	-	340	2	FSM	ENSMUSG00000024306.14	ENST00000579947.5	353	2	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACGAAGGACAACTAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	21978071	21962563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_21962778_21977945
ENSMUSG00000024308.16_0	chr17	+	2888	8	FSM	ENSMUSG00000024308.16	ENSMUST00000025161.10	2898	8	9	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCGGGCCTCTCATTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	34138314	34148265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145600_34145681_34147113
ENSMUSG00000024308.16_1	chr17	+	2582	8	FSM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGGGCCTCTCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34138616	34148264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34138699_34138844_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ENSMUSG00000024308.16_4	chr17	+	1048	4	FSM	ENSMUSG00000024308.16	ENST00000489157.5	1063	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAATCGCCTGGGGAACA	NA	NA	NA	NA	NA	NA	NA	NA	34138569	34145321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34138699_34138844_34139025_34144383_34144783_34144981
ENSMUSG00000024308.16_6	chr17	+	2500	7	ISM	ENSMUSG00000024308.16	ENSMUST00000234247.2	2589	8	233	2	233	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCGGGCCTCTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	34138843	34148263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34139025_34139222_34139484_34144383_34144783_34144981_34145324_34145401_34145492_34145603_34145681_34147113
ENSMUSG00000024309.16_0	chr17	-	784	4	FSM	ENSMUSG00000024309.16	ENSMUST00000025163.14	807	4	18	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGCCGGATTCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34159299	34157799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997
ENSMUSG00000024309.16_1	chr17	-	596	5	FSM	ENSMUSG00000024309.16	ENST00000395131.5	611	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGCTAACCCTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	34159384	34157933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34158086_34158512_34158638_34158721_34158793_34158997_34159140_34159278
ENSMUSG00000024312.11_0	chr17	+	2218	15	FSM	ENSMUSG00000024312.11	ENSMUST00000025170.11	2229	15	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTGTCTGGACCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	34159641	34168668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34159781_34159858_34160066_34160165_34160247_34160379_34160493_34160606_34160695_34160795_34160858_34162319_34162425_34162531_34162683_34162774_34162911_34163455_34163556_34167193_34167508_34167616_34167712_34167809_34167906_34168046_34168161_34168251
ENSMUSG00000024317.16_0	chr18	+	2412	8	FSM	ENSMUSG00000024317.16	ENSMUST00000234107.2	2422	8	4	6	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGCAGTTTTGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21134401	21160586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_1	chr18	+	2990	7	FSM	ENSMUSG00000024317.16	ENSMUST00000072847.12	3002	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTGTGTCTTAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	21134409	21161280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_21134598_21135013_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21159142
ENSMUSG00000024317.16_6	chr18	+	2260	7	FSM	ENSMUSG00000024317.16	ENSMUST00000234536.2	2271	7	5	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGCAGTTTTGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21134969	21160586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_21135227_21141781_21141948_21143733_21143850_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024317.16_8	chr18	+	1876	5	FSM	ENSMUSG00000024317.16	ENST00000257190.9	1886	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGCAGTTTTGTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21135071	21160586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_21135227_21150875_21150933_21153944_21154057_21157465_21157574_21159142
ENSMUSG00000024319.19_0	chr17	+	3368	20	FSM	ENSMUSG00000024319.19	ENSMUST00000025178.17	3383	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATAACTGTGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34174794	34186003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34175157_34175903_34175989_34176822_34176876_34176990_34177067_34177263_34177332_34177574_34177751_34178198_34178350_34178968_34179070_34179160_34179294_34179420_34179479_34180084_34180219_34180586_34180743_34181040_34181160_34181396_34181521_34181699_34181796_34181883_34181992_34182151_34182218_34184254_34184367_34184634_34184754_34184932
ENSMUSG00000024325.9_0	chr17	-	2029	7	FSM	ENSMUSG00000024325.9	ENSMUST00000025183.9	2034	7	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTAAGTAGTGAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	34243651	34239767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34240458_34240656_34240931_34241269_34241660_34241952_34242169_34242266_34242428_34243262_34243393_34243483
ENSMUSG00000024327.17_0	chr17	-	2306	7	FSM	ENSMUSG00000024327.17	ENSMUST00000025186.16	2320	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTTTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34250584	34247246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34249709_34249797
ENSMUSG00000024335.21_0	chr17	-	3947	12	FSM	ENSMUSG00000024335.21	ENST00000449085.4	3962	12	10	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34338600	34330997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337575
ENSMUSG00000024335.21_1	chr17	-	3151	11	FSM	ENSMUSG00000024335.21	ENST00000395287.5	3170	11	14	5	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34337716	34330997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34331683_34331829_34331953_34332150_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337575
ENSMUSG00000024335.21_10	chr17	-	4643	13	FSM	ENSMUSG00000024335.21	ENSMUST00000025193.14	4657	13	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTAGTTTTCTTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	34341563	34330999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34341135
ENSMUSG00000024335.21_2	chr17	-	4551	13	FSM	ENSMUSG00000024335.21	ENST00000374831.8	4566	13	10	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34339415	34330997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337575_34338958_34339168
ENSMUSG00000024335.21_9	chr17	-	4475	13	FSM	ENSMUSG00000024335.21	ENSMUST00000114242.9	4483	13	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGTTTTCTTAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	34340714	34330997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34331683_34331829_34331953_34332150_34332456_34332543_34332807_34332905_34333152_34333323_34333453_34333863_34334239_34334335_34334551_34334641_34334781_34335171_34335310_34335881_34336186_34337579_34338875_34340456
ENSMUSG00000024338.16_0	chr17	+	1605	6	FSM	ENSMUSG00000024338.16	ENSMUST00000025196.9	1628	6	18	5	18	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTCTGGGTTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34416781	34420423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34417520_34418206_34418355_34418544_34418657_34419114_34419245_34419684_34419890_34420151
ENSMUSG00000024338.16_1	chr17	+	928	6	FSM	ENSMUSG00000024338.16	ENST00000395339.7	948	6	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGTTATACATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34417376	34420410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34417520_34418206_34418355_34418613_34418657_34419114_34419245_34419684_34419890_34420151
ENSMUSG00000024339.13_0	chr17	+	3427	12	FSM	ENSMUSG00000024339.13	ENSMUST00000025197.6	3442	12	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGTTATGGTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	34422513	34435293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34423598_34424260_34424759_34424843_34424959_34427727_34427859_34428063_34428270_34430843_34431042_34431203_34431333_34432988_34433178_34433296_34433471_34433619_34433780_34434307_34434445_34434887
ENSMUSG00000024346.7_0	chr18	-	1106	4	FSM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36587574	36536728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36537514_36565358_36565444_36584132_36584300_36587505
ENSMUSG00000024346.7_1	chr18	-	1034	3	ISM	ENSMUSG00000024346.7	ENSMUST00000025204.7	1109	4	3281	0	3281	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTTGCCTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36584296	36536728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_36537514_36565358_36565444_36584132
ENSMUSG00000024349.11_0	chr18	-	2284	8	FSM	ENSMUSG00000024349.11	ENSMUST00000115728.5	2299	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGGAACTGCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35873600	35866741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35872977_35873068_35873359
ENSMUSG00000024349.11_1	chr18	-	2117	7	FSM	ENSMUSG00000024349.11	ENSMUST00000237919.2	2134	7	9	8	-8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCGGAACTGCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35873523	35866741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35867752_35868155_35868343_35868931_35869171_35871733_35871843_35872092_35872274_35872403_35872631_35873359
ENSMUSG00000024350.7_0	chr18	-	5131	8	FSM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAAAATTCGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	35836169	35804165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856_35834044_35836078
ENSMUSG00000024350.7_2	chr18	-	5042	7	ISM	ENSMUSG00000024350.7	ENSMUST00000025208.7	5146	8	2129	10	2129	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATACAAAATTCGACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	35834045	35804165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_35808297_35813818_35813992_35814972_35815083_35816270_35816378_35819720_35819907_35830030_35830177_35833856
ENSMUSG00000024352.13_0	chr18	-	696	6	FSM	ENSMUSG00000024352.13	ENSMUST00000025209.12	702	6	5	1	5	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAATGCCCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	35795234	35789742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35789898_35790001_35790105_35793335_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024352.13_1	chr18	-	584	4	FSM	ENSMUSG00000024352.13	ENST00000507779.2	602	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGGCTCGCTCCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35795170	35793116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35793398_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000024354.14_0	chr18	-	3012	15	FSM	ENSMUSG00000024354.14	ENSMUST00000025212.8	3026	15	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAATTCAGTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35760289	35747662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35748741_35752440_35752706_35754819_35754916_35755339_35755484_35755564_35755695_35755911_35756018_35756503_35756652_35757123_35757281_35757480_35757602_35757734_35757917_35758052_35758121_35758240_35758330_35758860_35759019_35759411_35759547_35760154
ENSMUSG00000024357.11_0	chr18	-	1681	10	FSM	ENSMUSG00000024357.11	ENSMUST00000025215.10	1703	10	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGACAATGGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35631970	35399458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481814_35551109_35551249_35571319_35571434_35631843
ENSMUSG00000024357.11_2	chr18	-	1510	9	FSM	ENSMUSG00000024357.11	ENSMUST00000235619.2	1524	9	4	10	4	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGACAATGGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35631943	35399458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35399963_35402091_35402257_35402666_35402764_35450894_35451017_35458336_35458529_35474150_35474251_35481692_35481809_35571319_35571434_35631843
ENSMUSG00000024359.11_0	chr18	-	3030	17	FSM	ENSMUSG00000024359.11	ENSMUST00000025217.11	3049	17	10	9	3	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	5383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAAATCCAGTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	35087400	35070475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024359.11_23	chr18	-	2195	16	FSM	ENSMUSG00000024359.11	ENST00000678051.1	2200	16	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGGCTGTGAACCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	35085790	35071120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35074917_35075146_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085462_35085537_35085729
ENSMUSG00000024359.11_29	chr18	-	2155	16	FSM	ENSMUSG00000024359.11	ENST00000677064.1	2167	16	9	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGGGCTGTGAACCAATCA	NA	NA	NA	NA	NA	NA	NA	NA	35087398	35071120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35071447_35071636_35071778_35071985_35072079_35072395_35072491_35073249_35073368_35073892_35073998_35076128_35076339_35078996_35079090_35079548_35079712_35080963_35081071_35081158_35081233_35082069_35082195_35084276_35084459_35085448_35085537_35085729_35085789_35087222
ENSMUSG00000024360.9_0	chr18	-	3687	11	FSM	ENSMUSG00000024360.9	ENSMUST00000025218.8	3709	11	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGAATATATTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	35065049	35035848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35038124_35039034_35039183_35040667_35040733_35041094_35041251_35042195_35042326_35042797_35042989_35043168_35043308_35046606_35046747_35047052_35047229_35064621_35064726_35064886
ENSMUSG00000024369.17_0	chr17	+	1593	11	FSM	ENSMUSG00000024369.17	ENSMUST00000097343.11	1607	11	9	5	2	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACACACTTGTTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	35069375	35075340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35069651_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_15	chr17	+	1313	10	ISM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	510	6	510	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTTGTTATTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	35069893	35075342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_5	chr17	+	1375	11	FSM	ENSMUSG00000024369.17	ENSMUST00000173357.8	1399	11	17	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTCACCTCCGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35069390	35075223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35069565_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024369.17_8	chr17	+	1375	11	FSM	ENSMUSG00000024369.17	ENSMUST00000165953.3	1381	11	0	6	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACACTTGTTATTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	35069383	35075342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35069439_35069886_35069970_35071319_35071390_35071491_35071638_35072400_35072476_35072588_35072627_35072783_35073110_35073196_35073342_35073420_35073476_35073671_35073775_35075063
ENSMUSG00000024370.18_0	chr18	-	2069	17	FSM	ENSMUSG00000024370.18	ENSMUST00000025228.12	2084	17	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATAGTATATACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	34784782	34764012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34764355_34767135_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUSG00000024370.18_1	chr18	-	4123	16	FSM	ENSMUSG00000024370.18	ENSMUST00000133181.2	4133	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAACGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34784778	34764735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34767218_34767445_34767566_34767640_34767720_34769338_34769401_34769755_34769832_34770111_34770232_34770372_34770527_34774148_34774231_34774347_34774446_34774525_34774704_34776851_34776985_34777077_34777184_34778118_34778162_34779954_34780093_34784442_34784516_34784599
ENSMUSG00000024376.8_0	chr18	-	3550	24	FSM	ENSMUSG00000024376.8	ENSMUST00000025234.7	3566	24	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTAGTGGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34139964	33929387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33930524_33931560_33931643_33931743_33931855_33934623_33934693_33935565_33935614_33943271_33943392_33957511_33957590_33958459_33958508_33961156_33961271_33961779_33961864_33965647_33965739_33987288_33987411_33992594_33992673_33994198_33994291_34007194_34007259_34007790_34007880_34009961_34010050_34011964_34012086_34013239_34013338_34019403_34019483_34024477_34024530_34054882_34054988_34139037_34139476_34139821
ENSMUSG00000024378.10_0	chr18	-	5084	6	FSM	ENSMUSG00000024378.10	ENSMUST00000025236.9	5097	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAATGAGATGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	33346906	33332411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33336869_33338103_33338219_33339172_33339300_33341229_33341280_33342095_33342211_33346686
ENSMUSG00000024378.10_2	chr18	-	117	1	NIC	ENSMUSG00000024378.10	novel	5097	6	NA	NA	3062	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCTAAAACTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33338218	33338101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_-_33338100_33338200
ENSMUSG00000024378.10_3	chr18	-	168	2	FSM	ENSMUSG00000024378.10	ENST00000509887.5	171	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACCTAAAACTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33341280	33338101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33338219_33341229
ENSMUSG00000024379.5_0	chr18	+	1119	5	FSM	ENSMUSG00000024379.5	ENSMUST00000025237.5	1126	5	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTCAAGTTTGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32948435	32952838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32948457_32948620_32948761_32949502_32949539_32950112_32950248_32952051
ENSMUSG00000024379.5_1	chr18	+	1085	4	ISM	ENSMUSG00000024379.5	ENSMUST00000025237.5	1126	5	205	0	205	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTGTTTCATTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	32948640	32952845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_32948761_32949502_32949539_32950112_32950248_32952051
ENSMUSG00000024381.17_0	chr18	+	2236	16	FSM	ENSMUSG00000024381.17	ENST00000259238.8	2264	16	10	18	10	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCGAAACAAACAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32510156	32568749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32556294_32556340_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_21	chr18	+	1869	13	FSM	ENSMUSG00000024381.17	ENSMUST00000234496.2	1886	13	8	9	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACCACCCAGAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	32510305	32568777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_26	chr18	+	2068	15	FSM	ENSMUSG00000024381.17	ENSMUST00000091967.13	2091	15	12	11	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACCCAGAACGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	32510309	32568779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32559276_32559406_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_5	chr18	+	2104	15	FSM	ENSMUSG00000024381.17	ENST00000352848.7	2135	15	13	18	13	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCGAAACAAACAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32510159	32568749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32552895_32552982_32553121_32553198_32554930_32555014_32556294_32556340_32557872_32558021_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024381.17_7	chr18	+	2398	18	FSM	ENSMUSG00000024381.17	ENST00000357970.7	2423	18	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCGAAACAAACAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32510153	32568749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32510544_32539152_32539234_32545473_32545529_32545669_32545765_32546147_32546244_32547235_32547344_32547997_32548091_32552895_32552982_32553121_32553198_32554930_32555014_32557872_32558021_32562248_32562357_32562752_32562777_32563802_32563911_32564723_32564796_32565035_32565147_32565376_32565479_32568187
ENSMUSG00000024382.14_0	chr18	+	2686	15	FSM	ENSMUSG00000024382.14	ENSMUST00000025241.7	2708	15	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATACCACATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	32373364	32403194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32373475_32373682_32373889_32376016_32376254_32377851_32377902_32378541_32378678_32378804_32378973_32379619_32379825_32381215_32381531_32387133_32387319_32390242_32390446_32394354_32394452_32397600_32397719_32398670_32398790_32400216_32400370_32402810
ENSMUSG00000024383.10_0	chr18	+	10677	17	FSM	ENSMUSG00000024383.10	ENSMUST00000096575.5	10684	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGATTTGTGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	32296248	32369797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32296604_32324953_32325024_32329892_32330012_32331703_32331745_32332991_32333092_32336078_32336193_32336852_32336941_32340460_32340592_32341694_32341775_32342781_32342850_32342996_32343090_32345014_32345222_32350196_32350346_32351412_32351545_32353557_32353688_32359604_32359783_32361175
ENSMUSG00000024384.5_0	chr18	+	9597	14	FSM	ENSMUSG00000024384.5	ENSMUST00000025243.5	9613	14	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAATTACACTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	32200801	32237373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32230202
ENSMUSG00000024384.5_4	chr18	+	2910	15	FSM	ENSMUSG00000024384.5	ENSMUST00000212675.2	2936	15	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGGTTGTCTCATCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	32200846	32230572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32201093_32203159_32203276_32212723_32213631_32216318_32216512_32217231_32217290_32217705_32217804_32219325_32219477_32220122_32220206_32221308_32221439_32222441_32222560_32223481_32223594_32224198_32224256_32226170_32226283_32226591_32226751_32230202
ENSMUSG00000024386.10_0	chr18	-	1332	5	FSM	ENSMUSG00000024386.10	ENST00000409048.1	1349	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTCACAGTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	32268058	32256342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_32256870_32258147_32258266_32260445_32260592_32266199_32266567_32267884
ENSMUSG00000024387.14_0	chr17	-	891	7	FSM	ENSMUSG00000024387.14	ENSMUST00000173114.8	917	7	16	10	16	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCATGAGCTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	35340389	35335181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340286
ENSMUSG00000024387.14_1	chr17	-	940	7	FSM	ENSMUSG00000024387.14	ENSMUST00000025246.13	961	7	9	12	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAGGCCATGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	35340253	35335185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35335402_35336671_35336862_35336971_35337048_35337434_35337551_35338729_35338833_35339420_35339504_35340097
ENSMUSG00000024392.18_10	chr17	+	3636	24	FSM	ENSMUSG00000024392.18	ENST00000375964.11	3647	24	11	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35354190	35366289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361702_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024392.18_17	chr17	+	3856	26	FSM	ENSMUSG00000024392.18	ENST00000676571.1	3865	26	9	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35354188	35366289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361473_35361582_35361670_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024392.18_2	chr17	+	3566	24	FSM	ENSMUSG00000024392.18	ENST00000362049.10	3578	24	12	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35354191	35366289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35354425_35355090_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35366116
ENSMUSG00000024392.18_78	chr17	+	3476	24	FSM	ENSMUSG00000024392.18	ENST00000375976.8	3482	24	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTAGTTTCGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	35355094	35366289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35355212_35357347_35357466_35357561_35357759_35357998_35358053_35358210_35358286_35359208_35359466_35359797_35359928_35360401_35360600_35360805_35361059_35361282_35361361_35361702_35361816_35361898_35361987_35362383_35362659_35363126_35363419_35363574_35363745_35363921_35363976_35364112_35364216_35364304_35364430_35364581_35364729_35364837_35364898_35365001_35365146_35365221_35365330_35365732_35365880_35366116
ENSMUSG00000024393.15_0	chr17	-	6848	31	FSM	ENSMUSG00000024393.15	ENSMUST00000025253.12	6888	31	17	23	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAATTTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35383856	35368074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35368378_35368485_35368577_35368675_35368771_35368884_35369098_35369203_35369303_35369473_35369685_35369792_35369882_35371593_35371762_35372027_35372100_35372200_35372342_35372482_35372717_35372897_35372984_35373083_35373214_35373441_35373573_35373767_35374037_35374341_35376184_35376323_35376535_35376854_35377156_35377368_35377560_35377911_35378390_35378755_35378967_35379072_35379164_35379427_35379571_35379728_35379809_35380003_35380156_35380309_35380454_35380617_35380691_35380785_35380886_35381177_35381356_35381847_35382023_35383710
ENSMUSG00000024395.10_0	chr18	+	1851	10	FSM	ENSMUSG00000024395.10	ENSMUST00000025254.9	1870	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATACTCGGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32064387	32091663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32064604_32074792_32074953_32077191_32077259_32077488_32077610_32087488_32087639_32088310_32088462_32089310_32089404_32090005_32090055_32090290_32090367_32090895
ENSMUSG00000024399.6_0	chr17	+	673	3	FSM	ENSMUSG00000024399.6	ENST00000446745.2	684	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCATCTGTATTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	35413500	35415121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35413660_35414269_35414342_35414679
ENSMUSG00000024400.17_12	chr18	+	2412	6	FSM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGCACTGTTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	31937231	31968474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUSG00000024400.17_16	chr18	+	2337	5	ISM	ENSMUSG00000024400.17	ENSMUST00000234344.2	2416	6	23085	1	23085	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACGGCACTGTTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	31960313	31968474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635
ENSMUSG00000024400.17_2	chr18	+	4552	22	FSM	ENSMUSG00000024400.17	ENSMUST00000025264.8	4575	22	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAACAGCAGCACCCACT	NA	NA	NA	NA	NA	NA	NA	NA	31937167	32040444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31937308_31960314_31960542_31962284_31962354_31962927_31963033_31966362_31966459_31966635_31966788_31968436_31968535_32011076_32011204_32012723_32012879_32012990_32013070_32014224_32014336_32018428_32018524_32019069_32019157_32019707_32019848_32020749_32020903_32021122_32022194_32026042_32026152_32029653_32030090_32035376_32035541_32035634_32035731_32037288_32037505_32039818
ENSMUSG00000024402.6_0	chr17	-	1331	4	FSM	ENSMUSG00000024402.6	ENST00000418386.3	1340	4	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTCTGCTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	35424137	35422141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35423126_35423350_35423451_35423533_35423639_35423995
ENSMUSG00000024403.17_0	chr17	+	516	3	FSM	ENSMUSG00000024403.17	ENST00000483251.1	533	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCACTTGTGTCGCATG	NA	NA	NA	NA	NA	NA	NA	NA	35455503	35456847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35455672_35456092_35456194_35456600
ENSMUSG00000024404.8_0	chr18	+	3772	13	FSM	ENSMUSG00000024404.8	ENSMUST00000025270.8	3790	13	10	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATGCAAGGGTGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	12261807	12290436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_5	chr18	+	1855	13	FSM	ENSMUSG00000024404.8	ENST00000581585.5	1874	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATAGATGTGTAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	12261822	12288582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12262031_12268908_12269025_12269797_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286969_12287078_12288276
ENSMUSG00000024404.8_9	chr18	+	1845	13	FSM	ENSMUSG00000024404.8	ENST00000577501.5	1869	13	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGATAATATAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	12261846	12288557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12262031_12268908_12269025_12269749_12269896_12269984_12270093_12270296_12270407_12272373_12272518_12275992_12276121_12281847_12282046_12282575_12282736_12285855_12285937_12286027_12286118_12286978_12287078_12288276
ENSMUSG00000024406.17_0	chr17	+	887	3	FSM	ENSMUSG00000024406.17	ENST00000513407.1	899	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCCTGGGGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	35819977	35821454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35820436_35820877_35821037_35821184
ENSMUSG00000024410.16_1	chr18	+	2153	20	FSM	ENSMUSG00000024410.16	ENSMUST00000025276.15	2170	20	9	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACATCCTCAAATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	12301782	12323046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12309193_12309251_12311244_12311332_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUSG00000024410.16_11	chr18	+	1807	18	FSM	ENSMUSG00000024410.16	ENST00000615148.4	1828	18	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTACAACATCCTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	12301856	12323042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322340_12322443_12322862
ENSMUSG00000024410.16_7	chr18	+	1908	18	FSM	ENSMUSG00000024410.16	ENST00000590868.5	1923	18	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTACAAAAAAATGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	12301854	12323017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12301960_12302289_12302367_12304605_12304691_12312169_12312311_12312545_12312650_12313541_12313632_12313722_12313829_12314640_12314753_12317035_12317081_12317265_12317320_12317948_12318078_12318705_12318813_12321265_12321386_12321616_12321695_12321876_12321982_12322069_12322139_12322216_12322443_12322862
ENSMUSG00000024411.12_0	chr18	-	843	3	FSM	ENSMUSG00000024411.12	ENST00000675739.1	860	3	13	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTAGAGGACAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	15533047	15526511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_15526787_15531147_15531313_15532644
ENSMUSG00000024413.15_0	chr18	-	5215	25	FSM	ENSMUSG00000024413.15	ENSMUST00000025279.6	5224	25	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAGGTCTTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	12369449	12322750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12324060_12324740_12324904_12326350_12326465_12327119_12327352_12328065_12328267_12329540_12329671_12330238_12330355_12331015_12331207_12331564_12331655_12332429_12332571_12332655_12332784_12333834_12333950_12334620_12334804_12335177_12335368_12337827_12337931_12341363_12341465_12343438_12343666_12344542_12344914_12345251_12345326_12346313_12346564_12347387_12347556_12352234_12352411_12354862_12354970_12356089_12356213_12369237
ENSMUSG00000024414.14_0	chr11	+	743	4	FSM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	94544595	94550905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94544668_94547312_94547445_94547808_94547877_94550434
ENSMUSG00000024414.14_2	chr11	+	671	3	ISM	ENSMUSG00000024414.14	ENSMUST00000025278.8	756	4	2720	10	2720	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAGATGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	94547312	94550905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_94547445_94547808_94547877_94550434
ENSMUSG00000024420.10_0	chr18	-	4312	7	FSM	ENSMUSG00000024420.10	ENST00000584787.5	4324	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGATTTTCAAAGTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	14105696	13821774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14105557
ENSMUSG00000024420.10_3	chr18	-	4244	8	FSM	ENSMUSG00000024420.10	ENST00000538137.6	4257	8	8	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACAACGTGTACTATC	NA	NA	NA	NA	NA	NA	NA	NA	14105700	13821933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_13822082_13848197_13848314_13850672_13850805_13950294_13950380_13976838_13980192_14072018_14072199_14104420_14104508_14105557
ENSMUSG00000024421.17_0	chr18	+	5161	38	FSM	ENSMUSG00000024421.17	ENST00000269217.11	5181	38	11	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTAACTCTACCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	12637290	12715712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658066_12658235_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070_12711202_12713342_12713437_12714749_12714870_12715574
ENSMUSG00000024421.17_14	chr18	+	4626	34	FSM	ENSMUSG00000024421.17	ENST00000587184.5	4643	34	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTATGCAGCCAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	12637302	12711198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12637453_12639977_12640092_12643506_12643617_12646700_12646782_12649538_12649646_12651793_12651845_12652915_12653068_12657562_12657674_12657782_12657895_12658840_12659038_12660605_12660723_12661351_12661507_12661769_12661912_12662562_12662666_12664888_12665006_12665090_12665271_12667017_12667161_12670743_12670915_12672725_12672878_12673018_12673182_12673591_12673726_12675364_12675510_12680398_12680519_12682248_12682383_12685834_12685953_12686221_12686363_12689683_12689824_12690727_12690860_12694753_12694908_12700722_12700890_12704956_12705141_12707270_12707412_12710808_12710969_12711070
ENSMUSG00000024422.15_0	chr17	+	3333	20	FSM	ENSMUSG00000024422.15	ENSMUST00000025292.15	3351	20	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAAAACCTGCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	36190719	36203553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36191011_36192169_36192415_36192521_36192688_36192913_36192971_36193333_36193589_36193736_36193941_36194024_36194217_36194706_36194818_36194911_36195028_36196386_36196598_36196775_36196875_36196981_36197135_36198290_36198432_36198726_36198890_36198975_36199095_36199246_36199315_36200089_36200253_36200330_36200493_36201806_36201981_36203310
ENSMUSG00000024423.7_0	chr18	+	3744	11	FSM	ENSMUSG00000024423.7	ENSMUST00000025290.7	3763	11	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTATGGCTACATTG	NA	NA	NA	NA	NA	NA	NA	NA	13104996	13126005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_13105430_13107769_13107899_13109035_13109089_13109525_13109589_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801_13122937_13123549
ENSMUSG00000024423.7_5	chr18	+	920	10	FSM	ENSMUSG00000024423.7	ENST00000519677.1	934	10	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAACTTCACGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	13107777	13122913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_13107899_13109035_13109089_13109525_13109589_13110628_13110725_13115146_13115233_13117295_13117422_13118275_13118374_13119380_13119455_13121351_13121443_13122801
ENSMUSG00000024424.16_0	chr18	+	4369	14	FSM	ENSMUSG00000024424.16	ENSMUST00000234966.2	4385	14	9	7	-9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGACTTCCTGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12776409	12871913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12777101_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ENSMUSG00000024424.16_2	chr18	+	1968	14	FSM	ENSMUSG00000024424.16	ENSMUST00000025294.9	1990	14	17	5	17	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTGACCTTGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	12776435	12870108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12776531_12817893_12817943_12820008_12820138_12822829_12822945_12828292_12828648_12830947_12831117_12853006_12853101_12857995_12858104_12861676_12861787_12863050_12863175_12866014_12866113_12867943_12868049_12869036_12869076_12869730
ENSMUSG00000024425.5_1	chr18	+	1779	8	FSM	ENSMUSG00000024425.5	ENSMUST00000236085.2	1796	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAGATTAGTGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	38551970	38598244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38552230_38575969_38576058_38580743_38580875_38584607_38584696_38585357_38585483_38589107_38589175_38593597_38593704_38597329
ENSMUSG00000024426.18_0	chr17	-	1433	13	FSM	ENSMUSG00000024426.18	ENSMUST00000061052.12	1452	13	8	11	8	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGACAAAAAGTGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36220959	36208497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024426.18_2	chr17	-	1314	12	FSM	ENSMUSG00000024426.18	ENSMUST00000077494.13	1340	12	17	9	16	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTATAGCTACCGACAA	NA	NA	NA	NA	NA	NA	NA	NA	36220921	36208509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36208808_36209148_36209192_36209279_36209360_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024426.18_3	chr17	-	1349	12	FSM	ENSMUSG00000024426.18	ENSMUST00000149277.8	1388	12	33	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACTATAGCTACCGACAA	NA	NA	NA	NA	NA	NA	NA	NA	36220916	36208509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36208808_36209148_36209243_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024426.18_4	chr17	-	2020	11	FSM	ENSMUSG00000024426.18	ENSMUST00000141662.8	2034	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTCAGCTTCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	36220929	36210714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36214999_36215069_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024426.18_7	chr17	-	1912	10	FSM	ENSMUSG00000024426.18	ENSMUST00000056034.13	1930	10	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGACATTTTCAGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	36220919	36210743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36211765_36212259_36212504_36212874_36212947_36215181_36215228_36219454_36219557_36219744_36219859_36219979_36220041_36220150_36220243_36220322_36220384_36220820
ENSMUSG00000024427.8_0	chr18	-	4720	2	FSM	ENSMUSG00000024427.8	ENSMUST00000025295.8	4755	2	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTGTCGTGTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	38734433	38719299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38723809_38734222
ENSMUSG00000024429.10_0	chr17	+	2831	12	FSM	ENSMUSG00000024429.10	ENSMUST00000087200.4	2848	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAGCAGAGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	36290753	36300348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36291140_36291508_36291675_36291953_36292091_36292198_36292351_36292449_36292522_36293416_36293625_36293838_36293935_36294286_36294482_36298356_36298536_36298616_36298780_36299004_36299146_36299412
ENSMUSG00000024430.15_0	chr18	+	1402	3	FSM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACGTCTCCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	12874404	12887096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12874459_12883716_12884886_12886917
ENSMUSG00000024430.15_2	chr18	+	1079	4	FSM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAAACTGCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12874404	12888193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_12874459_12883716_12884062_12886917_12887525_12888120
ENSMUSG00000024430.15_5	chr18	+	1343	2	ISM	ENSMUSG00000024430.15	ENST00000627314.1	1410	3	9317	8	9310	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACGTCTCCAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	12883721	12887096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_12884886_12886917
ENSMUSG00000024430.15_6	chr18	+	1019	3	ISM	ENSMUSG00000024430.15	ENST00000327201.10	1083	4	9318	4	9311	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATAAAACTGCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12883722	12888193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_12884062_12886917_12887525_12888120
ENSMUSG00000024431.16_0	chr18	-	6415	9	FSM	ENSMUSG00000024431.16	ENSMUST00000115567.8	6436	9	13	8	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAACATGTTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	39623714	39543605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39623620
ENSMUSG00000024431.16_2	chr18	-	6321	8	FSM	ENSMUSG00000024431.16	ENSMUST00000115571.8	6327	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAACATGTTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	39620298	39543605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050
ENSMUSG00000024431.16_5	chr18	-	4967	9	FSM	ENSMUSG00000024431.16	ENSMUST00000025300.13	4989	9	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCTCCAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	39622883	39545045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_39547688_39548748_39548907_39553628_39553760_39554459_39554605_39555540_39555817_39557435_39557553_39561669_39561834_39619050_39620299_39622797
ENSMUSG00000024436.17_0	chr17	-	983	6	ISM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	1583	0	1583	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36225698	36221270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587
ENSMUSG00000024436.17_1	chr17	-	1072	7	FSM	ENSMUSG00000024436.17	ENSMUST00000025305.16	1079	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36227274	36221270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36225225_36225295_36225383_36225482_36225587_36225697_36227183
ENSMUSG00000024436.17_4	chr17	-	798	4	FSM	ENSMUSG00000024436.17	ENSMUST00000113782.10	803	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGACTCCCTTTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36227276	36221270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36221849_36222310_36222371_36223229_36223297_36227183
ENSMUSG00000024442.7_0	chr18	+	2375	13	FSM	ENSMUSG00000024442.7	ENSMUST00000025314.7	2394	13	13	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCGGTCTTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	38383324	38395676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38391322_38391416_38392949_38393110_38394116_38394339_38394932
ENSMUSG00000024442.7_1	chr18	+	1813	7	FSM	ENSMUSG00000024442.7	ENSMUST00000236078.2	1837	7	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATGAATGTTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38383341	38388595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38383453_38384138_38384254_38384335_38384454_38385873_38386019_38386960_38387123_38387332_38387422_38387522
ENSMUSG00000024442.7_4	chr18	+	1083	7	NIC	ENSMUSG00000024442.7	novel	1097	8	NA	NA	5	-3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACCAAGGGCCAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	38385877	38395943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_+_38386019_38386960_38387123_38387332_38387422_38387522_38387620_38390310_38390454_38391080_38391240_38395651
ENSMUSG00000024446.14_0	chr17	-	425	4	FSM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTATATCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36568742	36566542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568674
ENSMUSG00000024446.14_1	chr17	-	360	3	ISM	ENSMUSG00000024446.14	ENSMUST00000077535.5	437	4	329	6	329	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTTATATCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	36568419	36566542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_36566691_36566835_36566962_36568333
ENSMUSG00000024446.14_2	chr17	-	712	5	FSM	ENSMUSG00000024446.14	ENSMUST00000025319.7	729	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTGTTCTGTGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	36568950	36566564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36566691_36566835_36566962_36568333_36568417_36568497_36568599_36568674
ENSMUSG00000024454.17_0	chr18	-	2016	15	FSM	ENSMUSG00000024454.17	ENSMUST00000043498.9	2032	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGTACTTTATTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	38088060	38070031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38070737_38074005_38074164_38074431_38074512_38074760_38074820_38074930_38075021_38076508_38076574_38076730_38076805_38077181_38077263_38077944_38078079_38078392_38078449_38078563_38078621_38078746_38078829_38085523_38085667_38087734_38087818_38087911
ENSMUSG00000024456.17_0	chr18	-	5705	28	NIC	ENSMUSG00000024456.17	novel	5741	29	NA	NA	5	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAACAGAATCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38068459	37976665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38044221_38044325_38068254
ENSMUSG00000024456.17_1	chr18	-	5629	26	NIC	ENSMUSG00000024456.17	novel	5666	27	NA	NA	16	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAACAGAATCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38068513	37976665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38068254
ENSMUSG00000024456.17_5	chr18	-	5572	27	NIC	ENSMUSG00000024456.17	novel	5596	28	NA	NA	0	-13	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATTGAAACAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	38068434	37976670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_-_37978552_37984603_37984691_37986355_37986492_37986596_37986762_37987532_37987658_37988526_37988657_37988765_37989006_37989226_37989329_37989505_37989601_37993467_37993567_38022750_38022866_38023529_38024223_38024845_38025026_38026402_38026468_38027146_38027263_38028234_38028352_38029147_38029267_38029413_38029525_38030546_38030656_38033697_38033838_38035137_38035202_38036116_38036204_38036379_38036511_38036808_38036911_38038056_38038213_38039440_38039468_38068254
ENSMUSG00000024457.17_0	chr17	+	3166	10	FSM	ENSMUSG00000024457.17	ENSMUST00000130367.8	3187	10	8	13	5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCAAGACAGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	37148042	37170277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37148157_37148388_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUSG00000024457.17_2	chr17	+	3188	10	FSM	ENSMUSG00000024457.17	ENSMUST00000053434.15	3198	10	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGTCAGAAATTTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	37148043	37170268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37148157_37148356_37148465_37161547_37162021_37162118_37162215_37163354_37163586_37165175_37165194_37167093_37167117_37167547_37167664_37167880_37167914_37168291
ENSMUSG00000024471.13_0	chr18	+	1453	10	FSM	ENSMUSG00000024471.13	ENST00000515645.1	1459	10	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCGTTTAACTAACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	44469836	44488451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44469917_44470246_44470378_44474369_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074_44479283_44487182_44487349_44487868_44488003_44488174
ENSMUSG00000024471.13_1	chr18	+	1364	9	FSM	ENSMUSG00000024471.13	ENST00000421631.6	1369	9	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCACAGCCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	44469838	44488495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44469917_44474369_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074_44479283_44487182_44487349_44487868_44488003_44488174
ENSMUSG00000024471.13_13	chr18	+	1369	9	ISM	ENSMUSG00000024471.13	ENST00000515645.1	1459	10	412	8	412	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAGGTCGTTTAACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	44470246	44488447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_44470378_44474369_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074_44479283_44487182_44487349_44487868_44488003_44488174
ENSMUSG00000024471.13_16	chr18	+	1286	8	ISM	ENSMUSG00000024471.13	ENST00000421631.6	1369	9	4535	1	4535	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGCACAGCCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	44474369	44488495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_44474545_44475408_44475511_44477508_44477556_44478078_44478212_44479074_44479283_44487182_44487349_44487868_44488003_44488174
ENSMUSG00000024472.10_0	chr18	+	8592	11	FSM	ENSMUSG00000024472.10	ENSMUST00000025350.10	8616	11	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATAAATGAGAATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44513603	44558022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ENSMUSG00000024472.10_13	chr18	+	4247	12	FSM	ENSMUSG00000024472.10	ENST00000389063.3	4261	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCAAATTCCTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	44513660	44553777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44513754_44528939_44529092_44532690_44532819_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632_44552540_44552582
ENSMUSG00000024472.10_9	chr18	+	1259	9	FSM	ENSMUSG00000024472.10	ENST00000513585.6	1272	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGCCTGTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44513659	44551025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44513754_44533383_44533483_44538276_44538430_44538523_44538637_44538719_44538828_44543249_44543386_44545582_44545694_44548443_44548496_44550632
ENSMUSG00000024474.8_0	chr18	+	1987	20	FSM	ENSMUSG00000024474.8	ENSMUST00000007042.6	1996	20	9	0	9	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTGGGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	36877717	36890692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888477_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024474.8_32	chr18	+	1628	17	FSM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTAAGCGGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	36878664	36890365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336
ENSMUSG00000024474.8_42	chr18	+	1559	16	ISM	ENSMUSG00000024474.8	ENST00000434096.1	1636	17	1740	7	1740	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTAAGCGGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	36880403	36890365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886733_36887605_36887692_36888487_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336
ENSMUSG00000024474.8_8	chr18	+	1991	20	NNC	ENSMUSG00000024474.8	novel	1996	20	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTGTTGGGCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	36877712	36890692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_+_36877842_36878663_36878731_36880400_36880494_36881216_36881277_36881603_36881772_36881923_36882039_36882266_36882338_36882443_36882491_36884156_36884321_36885409_36885519_36886314_36886355_36886479_36886706_36886944_36886964_36887605_36887685_36888478_36888559_36888749_36888808_36889600_36889690_36889874_36889984_36890336_36890372_36890459
ENSMUSG00000024477.5_0	chr18	-	7464	9	FSM	ENSMUSG00000024477.5	ENSMUST00000236216.2	7477	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCTAAAACTACATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	46414053	46368423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46374769_46379628_46379738_46381937_46382123_46387345_46387392_46391151_46391285_46392670_46392823_46395956_46396025_46407656_46407776_46413746
ENSMUSG00000024479.4_0	chr15	+	759	4	FSM	ENSMUSG00000024479.4	ENST00000531508.1	770	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCATTTTGTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	54435395	54464293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_54435601_54451709_54451881_54461806_54461963_54464066
ENSMUSG00000024480.10_0	chr18	+	1510	6	FSM	ENSMUSG00000024480.10	ENSMUST00000025357.9	1520	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTTTGCCTCCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	46874952	46923893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46875149_46887437_46887530_46891069_46891182_46912254_46912327_46913727_46913836_46922963
ENSMUSG00000024480.10_2	chr18	+	368	4	FSM	ENSMUSG00000024480.10	ENST00000605743.1	376	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGTATTAAAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	46875083	46923086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46875149_46912254_46912327_46913727_46913836_46922963
ENSMUSG00000024480.10_3	chr18	+	300	3	ISM	ENSMUSG00000024480.10	ENST00000605743.1	376	4	37176	6	37176	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGTATTAAAAAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	46912257	46923086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_46912327_46913727_46913836_46922963
ENSMUSG00000024481.6_4	chr18	+	2748	18	FSM	ENSMUSG00000024481.6	ENST00000357872.9	2766	18	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTAAGAAGGAACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	46983262	47028115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46983945_46997739_46997883_46999464_46999605_47006848_47006976_47009949_47010105_47011295_47011410_47013684_47013829_47014324_47014391_47014478_47014545_47015270_47015444_47017488_47017563_47018085_47018226_47020182_47020239_47022452_47022607_47023895_47023991_47026739_47026848_47027630_47027808_47027981
ENSMUSG00000024483.20_0	chr18	+	7589	33	FSM	ENSMUSG00000024483.20	ENST00000297183.10	7604	33	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGTTAGAAGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36693645	36791506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36788526_36788731_36789738_36789916_36791026_36791192_36791452
ENSMUSG00000024483.20_19	chr18	+	8179	34	FSM	ENSMUSG00000024483.20	ENST00000360839.7	8207	34	13	15	5	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGAACAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36693668	36791945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36694109_36708071_36708223_36711670_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36744852_36744941_36746145_36746274_36746885_36747030_36747767_36747871_36757561_36758321_36765119_36765266_36765402_36765515_36765760_36765907_36767279_36767423_36767644_36767859_36771257_36771434_36771598_36771762_36773317_36773414_36774629_36774747_36775978_36776148_36777313_36777768_36778157_36778293_36779743_36779894_36780183_36781794_36787145_36787320_36788526_36788731_36789738_36789916_36791026_36791192_36791452
ENSMUSG00000024483.20_45	chr18	+	1986	11	FSM	ENSMUSG00000024483.20	ENST00000394722.7	2001	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTGGTGAAGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	36693753	36741105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36694109_36708071_36708223_36711703_36711828_36714120_36714269_36716664_36716813_36722400_36722635_36724499_36724595_36727137_36727376_36727854_36728047_36733818_36733929_36740914
ENSMUSG00000024486.7_0	chr18	-	2358	6	FSM	ENSMUSG00000024486.7	ENSMUST00000025363.7	2375	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGTTCTGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	36648847	36637985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36639418_36639687_36639779_36640501_36640658_36645609_36645788_36648139_36648314_36648520
ENSMUSG00000024487.6_0	chr18	-	3308	6	FSM	ENSMUSG00000024487.6	ENSMUST00000025364.6	3328	6	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTCCATTGGTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	40352471	40336957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_40339454_40340739_40340922_40343800_40343947_40345095_40345269_40351798_40351919_40352280
ENSMUSG00000024491.17_0	chr18	+	6234	20	FSM	ENSMUSG00000024491.17	ENSMUST00000091920.6	6266	20	16	16	-3	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAATCACTAAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	42408433	42474591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUSG00000024491.17_1	chr18	+	6116	20	FSM	ENSMUSG00000024491.17	ENSMUST00000046972.14	6134	20	4	14	4	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATCACTAAAAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	42408421	42474593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUSG00000024491.17_4	chr18	+	6276	21	FSM	ENSMUSG00000024491.17	ENSMUST00000236240.2	6301	21	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATGGTTCACAATTGG	NA	NA	NA	NA	NA	NA	NA	NA	42408457	42474492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42408658_42421172_42421292_42425047_42425173_42431497_42431590_42432207_42432402_42433314_42433576_42434787_42435082_42438744_42438880_42447035_42447201_42450665_42450816_42452866_42453012_42453828_42453983_42454976_42455274_42457119_42457264_42458969_42459090_42460228_42460304_42460418_42460584_42465844_42465950_42466273_42466463_42470027_42470139_42471456
ENSMUSG00000024493.10_0	chr18	-	3970	32	FSM	ENSMUSG00000024493.10	ENSMUST00000097590.5	3980	32	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTTTTAATCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	42395250	42335363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357_42384446_42390134_42390260_42395025
ENSMUSG00000024493.10_46	chr18	-	3118	28	FSM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGAGAGTCGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	42384443	42335569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357
ENSMUSG00000024493.10_48	chr18	-	3407	30	FSM	ENSMUSG00000024493.10	ENST00000674398.1	3424	30	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGAGAGTCGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	42384441	42335569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350025_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42374967_42375194_42375768_42375837_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893_42383975_42384357
ENSMUSG00000024493.10_57	chr18	-	3034	27	ISM	ENSMUSG00000024493.10	ENST00000674191.1	3133	28	472	10	472	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGAGAGTCGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	42383976	42335569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_42335784_42343084_42343218_42344227_42344324_42345572_42345678_42347824_42347936_42349916_42350028_42350532_42350674_42351568_42351710_42352922_42353014_42354543_42354728_42358818_42358883_42360300_42360359_42361070_42361284_42361722_42361862_42362693_42362777_42362855_42362922_42363006_42363093_42366864_42366943_42367645_42367787_42368549_42368604_42369647_42369725_42369803_42369892_42376031_42376096_42376841_42376955_42377813_42377976_42379004_42379143_42383893
ENSMUSG00000024498.17_0	chr18	+	4393	22	FSM	ENSMUSG00000024498.17	ENSMUST00000237602.2	4417	22	16	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCTATTCTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	42644567	42708850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_13	chr18	+	4146	22	ISM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	7860	8	7860	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTTACACAATATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	42652434	42708637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_16	chr18	+	4013	20	ISM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	7865	5	7856	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGTGGATTGTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	42652430	42708614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_4	chr18	+	4090	21	FSM	ENSMUSG00000024498.17	ENSMUST00000025375.15	4101	21	6	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATGTGGATTGTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	42644571	42708614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024498.17_7	chr18	+	4228	23	FSM	ENSMUSG00000024498.17	ENST00000679501.2	4232	23	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAATATATTTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42644576	42708643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_42644651_42652432_42652659_42655978_42656132_42656957_42657418_42663712_42663956_42668149_42668213_42669242_42669444_42669926_42670040_42671032_42671122_42681461_42681623_42682902_42682960_42683106_42683174_42684174_42684226_42685556_42685693_42686472_42686563_42693998_42694118_42697147_42697299_42700935_42701101_42701492_42701676_42704079_42704260_42704888_42704973_42706324_42706426_42707582
ENSMUSG00000024500.21_0	chr18	-	2610	10	FSM	ENSMUSG00000024500.21	ENST00000394411.9	2622	10	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAACGCCTCCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	43032561	42777793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42779073_42781738_42781831_42796174_42796345_42821366_42821532_42834534_42834713_42864851_42864965_42870965_42871132_42874160_42874259_43031809_43032004_43032406
ENSMUSG00000024500.21_8	chr18	-	2245	9	FSM	ENSMUSG00000024500.21	ENSMUST00000117687.8	2271	9	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAGAGTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43032341	42778341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42779073_42781738_42781831_42796174_42796345_42821366_42821532_42834534_42834713_42864851_42864965_42870965_42871132_42874160_42874259_43031809
ENSMUSG00000024501.21_0	chr18	-	5462	14	FSM	ENSMUSG00000024501.21	ENSMUST00000121805.9	5479	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTACTGTTCTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	43571341	43454055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43570894
ENSMUSG00000024501.21_10	chr18	-	2074	14	FSM	ENSMUSG00000024501.21	ENSMUST00000025379.14	2106	14	8	24	8	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGCAAGAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43526434	43457376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43526054
ENSMUSG00000024501.21_6	chr18	-	1971	14	FSM	ENSMUSG00000024501.21	ENSMUST00000118043.8	1986	14	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCTAAAGAATCACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	43506328	43457297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43457486_43458789_43458953_43461389_43461570_43462755_43462927_43465936_43466079_43466945_43467103_43475306_43475428_43478170_43478240_43486945_43487027_43487807_43487870_43491298_43491464_43494026_43494212_43496567_43496657_43506130
ENSMUSG00000024502.11_0	chr18	-	4535	20	FSM	ENSMUSG00000024502.11	ENST00000507386.5	4553	20	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGCCACTAATCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	43723883	43663056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43665030_43670720_43670792_43673650_43673717_43680009_43680214_43682680_43682759_43685222_43685292_43689545_43689612_43690394_43690449_43691204_43691304_43692158_43692258_43696333_43696418_43698927_43699057_43700155_43700276_43701132_43701190_43704118_43704260_43704916_43705064_43708525_43708625_43710364_43710575_43714897_43715396_43723612
ENSMUSG00000024502.11_23	chr18	-	2964	21	FSM	ENSMUSG00000024502.11	ENST00000333010.6	2973	21	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCATGGAACCAAAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	43820808	43664710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43665030_43670720_43670792_43673650_43673717_43680009_43680214_43682680_43682759_43685222_43685292_43689545_43689612_43690394_43690449_43691204_43691304_43692158_43692258_43695595_43695659_43696333_43696418_43698927_43699057_43700155_43700276_43701132_43701190_43704118_43704260_43704916_43705064_43708525_43708625_43710364_43710575_43714897_43715396_43820517
ENSMUSG00000024505.17_0	chr18	-	3139	6	FSM	ENSMUSG00000024505.17	ENSMUST00000163590.9	3145	6	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	49888664	49829213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_49831568_49833325_49833455_49856688_49856882_49857179_49857275_49861435_49861527_49888387
ENSMUSG00000024505.17_3	chr18	-	1349	4	FSM	ENSMUSG00000024505.17	ENSMUST00000025383.10	1389	4	35	5	35	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTTTCAGTGTTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	49888599	49830650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_49831568_49833325_49833455_49861435_49861527_49888387
ENSMUSG00000024507.7_0	chr18	+	2678	24	FSM	ENSMUSG00000024507.7	ENSMUST00000025385.7	2684	24	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGCTCCTCTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	50261273	50329336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_50261477_50263192_50263247_50272514_50272623_50273406_50273467_50275536_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316365_50324778_50324907_50328921
ENSMUSG00000024507.7_10	chr18	+	1832	18	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	2275	6	2275	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTATGCCAAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	50277808	50328990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316360_50324778_50324907_50328921
ENSMUSG00000024507.7_5	chr18	+	1905	20	FSM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTATGCCAAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	50275533	50328990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_50275559_50275659_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316360_50324778_50324907_50328921
ENSMUSG00000024507.7_7	chr18	+	1877	19	ISM	ENSMUSG00000024507.7	ENST00000523778.1	1911	20	129	6	129	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTATGCCAAGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	50275662	50328990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_50275707_50277807_50277893_50279456_50279645_50288193_50288286_50291451_50291477_50293201_50293331_50295168_50295270_50297681_50297919_50299950_50300003_50303786_50303859_50305094_50305199_50306730_50306797_50310238_50310309_50310973_50311081_50312113_50312201_50314998_50315086_50316225_50316360_50324778_50324907_50328921
ENSMUSG00000024511.16_0	chr18	-	6884	7	FSM	ENSMUSG00000024511.16	ENSMUST00000121693.8	6891	7	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACTCTGTGTATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	70274674	70112206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70118449_70119982_70120107_70122614_70122719_70127547_70127634_70129139_70129312_70274388_70274465_70274594
ENSMUSG00000024511.16_2	chr18	-	2647	6	FSM	ENSMUSG00000024511.16	ENSMUST00000069749.9	2671	6	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAAGACAAACTGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	70186647	70116738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70118449_70119982_70120107_70122614_70122719_70127547_70127634_70129139_70129312_70186196
ENSMUSG00000024512.5_0	chr18	-	1212	3	FSM	ENSMUSG00000024512.5	ENSMUST00000025390.4	1225	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCACCTCTGAGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	70377645	70373504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70374387_70375075_70375157_70377396
ENSMUSG00000024513.17_0	chr18	+	1941	7	FSM	ENSMUSG00000024513.17	ENSMUST00000074058.11	1953	7	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCACAGACTGATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70701259	70759190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_70702039_70713723_70713884_70726273_70726412_70749635_70749727_70750906_70751085_70755653_70755793_70758734
ENSMUSG00000024515.14_0	chr18	-	3377	12	FSM	ENSMUSG00000024515.14	ENSMUST00000025393.14	3384	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACGAAGTGGAATTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	73836851	73772086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_73773541_73774853_73774993_73781955_73782125_73782796_73782981_73790265_73790317_73791638_73791756_73791849_73791970_73795728_73795939_73808231_73808262_73808841_73809017_73810733_73811111_73836500
ENSMUSG00000024516.14_0	chr18	+	848	6	FSM	ENSMUSG00000024516.14	ENSMUST00000025394.14	860	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTCTGCCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65933597	65950755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65933783_65942515_65942626_65945735_65945886_65947908_65948029_65949891_65949950_65950530
ENSMUSG00000024519.7_0	chr18	-	988	3	FSM	ENSMUSG00000024519.7	ENST00000587244.5	1004	3	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGAGGGGAGGAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66103190	66074192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_66074828_66100513_66100628_66102951
ENSMUSG00000024521.9_0	chr18	+	2709	3	FSM	ENSMUSG00000024521.9	ENSMUST00000025399.9	2727	3	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGCCACTGGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66591611	66598621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_66591884_66593913_66594070_66596340
ENSMUSG00000024525.8_0	chr18	+	5039	8	FSM	ENSMUSG00000024525.8	ENSMUST00000025403.8	5054	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGATGCCTTGGTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	67422264	67455536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67422577_67435245_67435380_67439740_67439846_67442121_67442168_67443716_67443826_67448689_67448799_67449951_67450104_67451464
ENSMUSG00000024527.11_0	chr18	-	3079	17	FSM	ENSMUSG00000024527.11	ENSMUST00000025408.10	3094	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATGAAGGGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67582233	67537839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67538585_67540335_67540531_67542467_67542669_67547147_67547264_67548568_67548680_67554055_67554182_67554277_67554386_67556014_67556169_67558958_67559097_67562050_67562325_67564723_67564849_67567224_67567300_67573251_67573405_67573511_67573616_67575379_67575458_67575820_67575921_67581957
ENSMUSG00000024528.9_0	chr18	+	2645	8	FSM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAATTCTATGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	52598770	52624998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_52598858_52608667_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024528.9_12	chr18	+	2560	7	ISM	ENSMUSG00000024528.9	ENSMUST00000025406.9	2656	8	9901	5	9901	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGAATTCTATGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	52608665	52624998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_52608757_52609371_52609445_52616704_52616777_52620583_52620666_52621322_52622044_52623089_52623128_52623515
ENSMUSG00000024529.15_0	chr18	-	4722	7	FSM	ENSMUSG00000024529.15	ENSMUST00000025409.9	4741	7	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCATTTCTTGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52662727	52649138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_52652306_52653865_52653982_52654314_52654411_52658154_52658312_52659972_52660111_52661350_52661460_52661788
ENSMUSG00000024529.15_3	chr18	-	4468	8	FSM	ENSMUSG00000024529.15	ENSMUST00000171470.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCATTTCTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	52662939	52649140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_52652306_52653865_52653982_52654314_52654411_52658154_52658312_52659972_52660111_52661350_52661460_52661788_52662439_52662902
ENSMUSG00000024530.9_0	chr18	+	1379	7	FSM	ENSMUSG00000024530.9	ENSMUST00000025411.9	1404	7	22	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCATGGCAACTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	67597957	67612902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67598027_67605926_67606096_67606810_67606901_67609864_67609936_67610033_67610137_67611019_67611132_67612137
ENSMUSG00000024530.9_1	chr18	+	325	4	FSM	ENSMUSG00000024530.9	ENST00000590956.5	332	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAACGCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	67597959	67610130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67598027_67606810_67606901_67609864_67609936_67610033
ENSMUSG00000024530.9_5	chr18	+	258	3	ISM	ENSMUSG00000024530.9	ENST00000590956.5	332	4	8851	7	8851	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAACGCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	67606810	67610130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_67606901_67609864_67609936_67610033
ENSMUSG00000024533.18_0	chr18	-	5398	17	FSM	ENSMUSG00000024533.18	ENSMUST00000115050.10	5405	17	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAACTTCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	67743860	67621285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67645910_67645950_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ENSMUSG00000024533.18_2	chr18	-	5021	15	FSM	ENSMUSG00000024533.18	ENSMUST00000045105.13	5033	15	5	7	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAACTTCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	67685786	67621285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67634137_67634312_67636500_67636644_67638720_67638815_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643
ENSMUSG00000024533.18_4	chr18	-	4914	15	FSM	ENSMUSG00000024533.18	ENSMUST00000082243.7	4950	15	33	3	-23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAACTTCTGTGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	67685814	67621285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638815_67639623_67639797_67645910_67645950_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643
ENSMUSG00000024533.18_5	chr18	-	3838	17	FSM	ENSMUSG00000024533.18	ENST00000409402.8	3860	17	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTTACAGTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67743897	67622882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638812_67639623_67639797_67645910_67645953_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ENSMUSG00000024533.18_8	chr18	-	3785	16	FSM	ENSMUSG00000024533.18	ENST00000410092.7	3818	16	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTTACAGTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	67743886	67622882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67624620_67628209_67628347_67628432_67628461_67629631_67629703_67630246_67630385_67636500_67636644_67638720_67638812_67639623_67639797_67652360_67652491_67652873_67652961_67661933_67662099_67663476_67663555_67678684_67678811_67685643_67685878_67720894_67720930_67743474
ENSMUSG00000024535.17_0	chr18	+	1945	7	FSM	ENSMUSG00000024535.17	ENSMUST00000165032.9	1977	7	12	20	12	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAACAAACAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53378745	53523972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_53378925_53460483_53460568_53473201_53473307_53516141_53516237_53517688_53517722_53518249_53518315_53522588
ENSMUSG00000024537.6_0	chr18	+	1039	7	FSM	ENSMUSG00000024537.6	ENSMUST00000025418.4	1059	7	13	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTAAGCGGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	67774681	67787225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67774806_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUSG00000024537.6_5	chr18	+	1265	7	FSM	ENSMUSG00000024537.6	ENSMUST00000235799.2	1300	7	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCTAAGCGGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	67774698	67787225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67775049_67777378_67777551_67779062_67779122_67781197_67781317_67781842_67782017_67786222_67786344_67786955
ENSMUSG00000024538.9_0	chr18	-	1382	5	FSM	ENSMUSG00000024538.9	ENSMUST00000025419.9	1403	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCAATGGACTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	53551177	53539414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_53540138_53542196_53542382_53544058_53544153_53544577_53544692_53550911
ENSMUSG00000024539.18_0	chr18	-	1548	10	FSM	ENSMUSG00000024539.18	ENSMUST00000025420.14	1568	10	10	10	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATAGACTATGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67857648	67798591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_25	chr18	-	2645	9	FSM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	16	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTTACATTGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	67857649	67804287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_3	chr18	-	1598	10	FSM	ENSMUSG00000024539.18	ENST00000591115.5	1613	10	7	8	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATAGACTATGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67857639	67798591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67798945_67805736_67805839_67808789_67808957_67810779_67810933_67813909_67814151_67814484_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67857511
ENSMUSG00000024539.18_32	chr18	-	1564	8	ISM	ENSMUSG00000024539.18	ENSMUST00000122412.2	2667	9	12675	942	12653	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACTGTTGAAATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	67844990	67805223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906
ENSMUSG00000024539.18_33	chr18	-	1609	9	FSM	ENSMUSG00000024539.18	ENST00000646492.1	1616	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACTGTTGAAATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	67880663	67805223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67805839_67808789_67808957_67810779_67810933_67813909_67814120_67814512_67814648_67821960_67822060_67828693_67828795_67844906_67844998_67880625
ENSMUSG00000024544.10_11	chr18	+	1644	2	FSM	ENSMUSG00000024544.10	ENST00000678400.1	1664	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATACCCTATTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	68368738	68388581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_68368881_68387079
ENSMUSG00000024544.10_2	chr18	+	2467	5	FSM	ENSMUSG00000024544.10	ENST00000677055.1	2486	5	8	11	1	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCAATAAATCGTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68067085	68388597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_68067319_68197250_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024544.10_8	chr18	+	2108	4	ISM	ENSMUSG00000024544.10	ENST00000399848.7	2149	5	130494	4	8	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGTCTGTTTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	68197578	68388712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_68197758_68239621_68239763_68368725_68368881_68387079
ENSMUSG00000024544.10_9	chr18	+	2021	4	FSM	ENSMUSG00000024544.10	ENST00000679177.1	2033	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGTCTGTTTAGCACC	NA	NA	NA	NA	NA	NA	NA	NA	68197578	68388712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_68197758_68368725_68368881_68383641_68383696_68387079
ENSMUSG00000024556.5_0	chr18	-	2620	16	FSM	ENSMUSG00000024556.5	ENSMUST00000025439.5	2638	16	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAGACCAGGAAATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	73948500	73902982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_73903880_73906200_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924154_73924269_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122_73938241_73948374
ENSMUSG00000024556.5_8	chr18	-	1466	13	FSM	ENSMUSG00000024556.5	ENST00000639850.1	1482	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGTAAGCAATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	73938229	73906206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_73906300_73908449_73908521_73914112_73914216_73918765_73918909_73921424_73921540_73924679_73924778_73924871_73924982_73927516_73927621_73927851_73928014_73929384_73929461_73930899_73931050_73934799_73934934_73938122
ENSMUSG00000024558.13_0	chr18	-	4554	6	FSM	ENSMUSG00000024558.13	ENSMUST00000091851.10	4594	6	27	13	20	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGAACATAAATTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	74197973	74061569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_74064166_74066967_74067170_74068076_74068239_74070200_74070346_74102961_74104348_74197910
ENSMUSG00000024560.8_0	chr18	+	2604	15	FSM	ENSMUSG00000024560.8	ENSMUST00000025444.8	2620	15	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCAACAAGGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	74349208	74354555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_74349554_74350237_74350357_74350459_74350561_74350831_74351068_74351156_74351349_74351699_74351727_74351802_74352049_74352201_74352310_74352453_74352639_74352908_74353117_74353191_74353303_74353427_74353478_74353579_74353677_74353898_74354052_74354129
ENSMUSG00000024561.12_0	chr18	+	2777	15	FSM	ENSMUSG00000024561.12	ENSMUST00000097530.5	2833	15	2	54	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTGTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74401247	74415749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_74401505_74402473_74402610_74406279_74406395_74406483_74406729_74406805_74406889_74407086_74407128_74407485_74407633_74407715_74407845_74408218_74408330_74408413_74408489_74409477_74409787_74409872_74410011_74410371_74410501_74410587_74410650_74414949
ENSMUSG00000024563.17_0	chr18	+	8063	11	FSM	ENSMUSG00000024563.17	ENSMUST00000168423.9	8089	11	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAACACAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	76374658	76444016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_76375051_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_3	chr18	+	3440	11	FSM	ENSMUSG00000024563.17	ENST00000262160.11	3459	11	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAATTTAACACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	76375158	76439640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_76375304_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024563.17_6	chr18	+	2374	11	FSM	ENSMUSG00000024563.17	ENSMUST00000025453.15	2410	11	29	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAGTGGATTAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	76394220	76438358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_76394582_76395510_76395799_76419930_76420021_76420998_76421193_76422109_76422245_76425980_76426056_76431518_76431573_76432853_76433067_76435149_76435288_76435453_76435599_76437677
ENSMUSG00000024566.11_0	chr18	-	5345	30	FSM	ENSMUSG00000024566.11	ENSMUST00000091790.5	5357	30	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGTCCTGGTCTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80977188	80777357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80779365_80780026_80780060_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ENSMUSG00000024566.11_34	chr18	-	3279	28	FSM	ENSMUSG00000024566.11	ENST00000307671.12	3290	28	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGGGCATGAGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	80961084	80779229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820250_80822067_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919
ENSMUSG00000024566.11_7	chr18	-	5134	29	FSM	ENSMUSG00000024566.11	ENSMUST00000225980.2	5150	29	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCTAGCTCAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	80977263	80777610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80779365_80781867_80782072_80782961_80783020_80793033_80793143_80795972_80796038_80796206_80796363_80797163_80797229_80797459_80797605_80799668_80799759_80801509_80801609_80805276_80805448_80806088_80806173_80808237_80808331_80808985_80809148_80820012_80820262_80822077_80822191_80838504_80838648_80851826_80851988_80879569_80879647_80887741_80887818_80890386_80890468_80901758_80901854_80912956_80913009_80920529_80920589_80935029_80935139_80952806_80952921_80956011_80956163_80960919_80961094_80977038
ENSMUSG00000024570.8_0	chr18	-	1359	6	FSM	ENSMUSG00000024570.8	ENSMUST00000025462.7	1377	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAGAATTTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	80243861	80235485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80236098_80236446_80236515_80238233_80238319_80240464_80240578_80240878_80241099_80243600
ENSMUSG00000024571.16_16	chr18	+	1627	4	FSM	ENSMUSG00000024571.16	ENSMUST00000025463.14	1650	4	5	18	5	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCTGAAAAAATAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	80250086	80255920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80250162_80250368_80250559_80253276_80253346_80254627
ENSMUSG00000024571.16_19	chr18	+	1738	4	FSM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	9	8	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACGTTTGTTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	80250118	80255948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80250277_80250368_80250559_80253276_80253346_80254627
ENSMUSG00000024571.16_23	chr18	+	1560	3	ISM	ENSMUSG00000024571.16	ENSMUST00000127234.8	1755	4	257	30	-108	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80250366	80255926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_80250559_80253276_80253346_80254627
ENSMUSG00000024571.16_25	chr18	+	1587	4	FSM	ENSMUSG00000024571.16	ENSMUST00000153363.3	1602	4	7	8	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACACGTTTGTTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	80250481	80255948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80250559_80251324_80251445_80253276_80253346_80254627
ENSMUSG00000024571.16_4	chr18	+	1652	4	FSM	ENSMUSG00000024571.16	ENSMUST00000125127.8	1683	4	10	21	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80250022	80255926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80250117_80250368_80250559_80253276_80253346_80254627
ENSMUSG00000024576.15_0	chr18	+	4057	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165123.8	4083	10	10	16	10	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATATATATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	61688354	61723116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496
ENSMUSG00000024576.15_14	chr18	+	2485	12	FSM	ENSMUSG00000024576.15	ENST00000515768.6	2492	12	7	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAAGGTTTGGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	61688382	61721706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61720496_61721431_61721648
ENSMUSG00000024576.15_28	chr18	+	2315	10	FSM	ENSMUSG00000024576.15	ENSMUST00000165721.8	2323	10	8	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGAAATTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61688391	61721375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUSG00000024576.15_38	chr18	+	1467	10	FSM	ENSMUSG00000024576.15	ENSMUST00000115246.9	1484	10	11	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTCTTTTGTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	61688399	61715181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713523_61715106
ENSMUSG00000024576.15_42	chr18	+	1849	10	FSM	ENSMUSG00000024576.15	ENSMUST00000166990.8	1860	10	11	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAGAGATATTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	61688399	61718702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713547_61718269
ENSMUSG00000024576.15_47	chr18	+	3187	9	FSM	ENSMUSG00000024576.15	ENSMUST00000163205.8	3204	9	14	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTGACTGCTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	61688412	61715330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409
ENSMUSG00000024576.15_50	chr18	+	2236	11	FSM	ENSMUSG00000024576.15	ENSMUST00000170862.8	2259	11	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGTATGTGTGTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	61688426	61721247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61688945_61689573_61689681_61701334_61701462_61702534_61702634_61704944_61705029_61708480_61708621_61709577_61709657_61710248_61710324_61711737_61711845_61713409_61713559_61720496
ENSMUSG00000024579.8_0	chr18	-	2003	6	FSM	ENSMUSG00000024579.8	ENSMUST00000025472.7	2017	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTACTTCTGACTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	61840697	61829912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61831048_61831434_61831576_61832363_61832576_61835266_61835442_61836582_61836790_61840564
ENSMUSG00000024580.9_0	chr18	-	4016	4	FSM	ENSMUSG00000024580.9	ENSMUST00000062991.9	4038	4	3	19	3	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAAAGAGAAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	61859391	61845513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61849199_61851824_61851907_61852772_61852927_61859296
ENSMUSG00000024580.9_2	chr18	-	546	3	FSM	ENSMUSG00000024580.9	ENST00000448626.1	565	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGACTCTGAACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	61852917	61848847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61849167_61851824_61851907_61852772
ENSMUSG00000024581.14_0	chr18	+	3559	12	FSM	ENSMUSG00000024581.14	ENSMUST00000025474.14	3567	12	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGTCAGTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	63110907	63132519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_63111096_63113536_63113605_63115689_63115775_63116444_63116463_63117110_63117142_63119249_63119360_63119481_63119549_63120024_63120096_63124871_63124951_63127382_63127463_63128033_63128164_63129887
ENSMUSG00000024583.4_0	chr18	-	4327	8	FSM	ENSMUSG00000024583.4	ENSMUST00000237004.2	4343	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3091	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTTATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	63825498	63794170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_63797404_63804652_63804758_63807119_63807293_63808514_63808585_63809949_63810073_63812423_63812598_63815281_63815379_63825146
ENSMUSG00000024587.11_0	chr18	-	2716	15	FSM	ENSMUSG00000024587.11	ENSMUST00000237400.2	2745	15	11	18	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	NA	NA	NA	NA	NA	NA	NA	64649712	64632735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648480_64649486
ENSMUSG00000024587.11_9	chr18	-	2668	15	FSM	ENSMUSG00000024587.11	ENSMUST00000025483.11	2687	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAACCAAAACACT	NA	NA	NA	NA	NA	NA	NA	NA	64649667	64632735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_64633721_64634373_64634506_64634814_64634947_64636578_64636693_64637408_64637545_64637918_64638119_64638227_64638450_64640842_64640930_64642315_64642387_64643523_64643603_64644681_64644772_64644855_64644949_64645054_64645121_64648396_64648477_64649486
ENSMUSG00000024588.11_0	chr18	-	6553	11	FSM	ENSMUSG00000024588.11	ENSMUST00000236586.3	6571	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACAGTGTTGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	64622159	64585990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64616404_64616529_64621971
ENSMUSG00000024588.11_9	chr18	-	2049	10	FSM	ENSMUSG00000024588.11	ENSMUST00000025484.9	2059	10	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTCAGTCTTTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	64622131	64590342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_64591289_64591725_64591786_64594591_64594757_64595177_64595286_64597156_64597256_64600798_64600906_64603752_64603888_64608127_64608277_64611721_64611842_64621971
ENSMUSG00000024589.19_32	chr18	+	4434	28	FSM	ENSMUSG00000024589.19	ENST00000675865.1	4454	28	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACGTGGGGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65156840	65347504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65157061_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUSG00000024589.19_4	chr18	+	639	2	FSM	ENSMUSG00000024589.19	ENST00000617539.1	662	2	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCCACACCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	65020939	65021852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65021167_65021440
ENSMUSG00000024589.19_53	chr18	+	4345	27	FSM	ENSMUSG00000024589.19	ENST00000635997.1	4363	27	9	9	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGGAAAAGTGAGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	65216575	65346378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65217866_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65300584_65300645_65305345_65305478_65305986_65306107_65307115_65307314_65311989_65312068_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUSG00000024589.19_6	chr18	+	4285	28	FSM	ENSMUSG00000024589.19	ENST00000676024.1	4302	28	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACGTGGGGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65020975	65347504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65021167_65130418_65130493_65207794_65207877_65210768_65210808_65213088_65213143_65276866_65276918_65288326_65288389_65288716_65288820_65290915_65291083_65294585_65294722_65296065_65296243_65298642_65298718_65305345_65305478_65305986_65306107_65314398_65314454_65319396_65319456_65324507_65324574_65326146_65326377_65328130_65328253_65328985_65329057_65331701_65331798_65336946_65337021_65338703_65338765_65341119_65341180_65341462_65341571_65342723_65342821_65343333_65343407_65345854
ENSMUSG00000024590.9_0	chr18	+	2833	11	FSM	ENSMUSG00000024590.9	ENSMUST00000025486.9	2843	11	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATCTACTGTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	56840889	56886491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_56841547_56861472_56861630_56862358_56862485_56864041_56864213_56866283_56866410_56872892_56873114_56873758_56873985_56876282_56876388_56881048_56881169_56882770_56882882_56885678
ENSMUSG00000024592.16_0	chr18	-	2392	5	FSM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCACCAAAAACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57108440	57088912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455_57106557_57108405
ENSMUSG00000024592.16_1	chr18	-	2347	4	ISM	ENSMUSG00000024592.16	ENSMUST00000025488.15	2400	5	1894	8	1880	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCACCAAAAACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57106546	57088912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57106455
ENSMUSG00000024592.16_3	chr18	-	722	6	FSM	ENSMUSG00000024592.16	ENSMUST00000139243.9	726	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCGTGACCGTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	57108422	57090685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_57090994_57091594_57091652_57095472_57095591_57100164_57100262_57106455_57106557_57108381
ENSMUSG00000024592.16_4	chr18	-	671	5	ISM	ENSMUSG00000024592.16	ENSMUST00000139243.9	726	6	1880	0	1880	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCGTGACCGTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	57106546	57090685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_57090994_57091594_57091652_57095472_57095591_57100164_57100262_57106455
ENSMUSG00000024593.16_0	chr18	+	7499	25	FSM	ENSMUSG00000024593.16	ENSMUST00000075770.13	7514	25	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAACAACTGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	57266167	57430530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_57266803_57313540_57313674_57322572_57322675_57324178_57324280_57345393_57345487_57373615_57373863_57375734_57375856_57379605_57379743_57385905_57386119_57392734_57392910_57394182_57394304_57395065_57395230_57397512_57397616_57408752_57408900_57410060_57410196_57410667_57410797_57414695_57414825_57416865_57416995_57418879_57419009_57420854_57421092_57422354_57422483_57423468_57423593_57424842_57424888_57425640_57425848_57426915
ENSMUSG00000024594.10_0	chr18	+	5017	9	FSM	ENSMUSG00000024594.10	ENSMUST00000025490.10	5030	9	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGTGCAATGATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	57487822	57526025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_57487964_57495504_57495622_57496147_57496538_57498260_57498422_57504438_57504542_57507598_57507763_57514699_57514804_57517245_57517349_57522291
ENSMUSG00000024597.12_0	chr18	+	6511	27	FSM	ENSMUSG00000024597.12	ENSMUST00000115366.3	6520	27	1	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTACTCTTGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58011750	58079885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_58012617_58029353_58029474_58030415_58030492_58031130_58031227_58032331_58032472_58033093_58033205_58034427_58034537_58037195_58037324_58037409_58037495_58039024_58039177_58043312_58043421_58044961_58045086_58045908_58046011_58047177_58047334_58048480_58048581_58052527_58052640_58054817_58054959_58059478_58059586_58063226_58063307_58065551_58065678_58068022_58068071_58069379_58069503_58070731_58070844_58073206_58073294_58074080_58074217_58074824_58074893_58076987
ENSMUSG00000024598.10_0	chr18	-	4694	33	FSM	ENSMUSG00000024598.10	ENST00000508989.5	4704	33	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCATCTTCTCCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	58342993	58194482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_58194836_58196578_58196702_58199065_58199189_58201337_58201464_58202199_58202326_58202478_58202602_58203019_58203146_58204864_58204991_58205625_58205755_58209051_58209178_58209683_58209912_58213217_58213344_58213795_58213847_58214379_58214518_58217648_58217769_58223615_58223742_58226365_58226492_58228253_58228308_58228981_58229135_58235401_58235525_58237050_58237174_58238167_58238294_58239365_58239486_58246318_58246457_58247448_58247662_58248649_58248803_58257287_58257414_58282062_58282189_58286831_58287030_58323312_58323409_58333681_58333778_58341671_58341755_58342623
ENSMUSG00000024600.9_0	chr18	+	1844	10	FSM	ENSMUSG00000024600.9	ENST00000262462.9	1861	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTAAAGACTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58689540	58745418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_58690017_58705100_58705305_58712864_58713024_58715242_58715368_58731620_58731814_58738109_58738201_58740695_58740895_58742241_58742340_58742865_58742997_58745250
ENSMUSG00000024601.10_0	chr18	+	3357	5	FSM	ENSMUSG00000024601.10	ENSMUST00000025503.10	3377	5	10	10	-4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGTAAACAAGAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	58792547	58813430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_58792870_58804279_58804400_58804519_58804724_58806321_58806439_58810836
ENSMUSG00000024603.9_0	chr18	+	3725	13	FSM	ENSMUSG00000024603.9	ENSMUST00000025505.7	3738	13	13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGTTTCACAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	60659285	60691838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60659438_60667664_60667736_60671335_60671515_60674643_60674688_60677110_60677219_60678819_60678894_60679292_60679406_60679838_60679949_60683257_60683332_60684959_60685015_60685916_60686025_60688178_60688277_60689299
ENSMUSG00000024603.9_6	chr18	+	1512	2	FSM	ENSMUSG00000024603.9	ENSMUST00000223590.2	1530	2	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAATACTTTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	60659293	60661040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60659438_60659672
ENSMUSG00000024604.8_0	chr18	+	2201	11	FSM	ENSMUSG00000024604.8	ENSMUST00000025506.7	2210	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTTTAAGACTGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	60693816	60705882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60693952_60694322_60694377_60696837_60696868_60697434_60697568_60698689_60698791_60699424_60699598_60700442_60700644_60702428_60702594_60703852_60703942_60704071_60704204_60704894
ENSMUSG00000024608.12_0	chr18	+	748	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235966.2	755	6	2	5	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTTGGTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60880222	60911612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60880294_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUSG00000024608.12_11	chr18	+	591	5	FSM	ENSMUSG00000024608.12	ENSMUST00000025511.11	597	5	0	6	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTTGGTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60907667	60911612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUSG00000024608.12_16	chr18	+	502	4	FSM	ENSMUSG00000024608.12	ENSMUST00000122279.2	667	4	160	5	160	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTTGGTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60909470	60911612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUSG00000024608.12_9	chr18	+	775	6	FSM	ENSMUSG00000024608.12	ENSMUST00000235603.2	785	6	7	3	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTATTTTGGTTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	60880749	60911612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_60880848_60907581_60907759_60909472_60909624_60910001_60910164_60910884_60910962_60911502
ENSMUSG00000024613.17_0	chr18	-	4579	26	FSM	ENSMUSG00000024613.17	ENSMUST00000175934.8	4595	26	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATAAAGGTTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	60981994	60946835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60960411_60960520_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUSG00000024613.17_1	chr18	-	4504	25	FSM	ENSMUSG00000024613.17	ENSMUST00000176630.8	4529	25	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATAAAGGTTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	60982028	60946836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60947261_60947594_60947641_60948029_60948125_60949072_60949601_60951101_60951283_60951933_60952017_60952459_60952683_60954714_60954837_60955875_60956063_60961436_60961632_60961727_60961908_60962085_60962188_60964584_60964753_60964845_60965068_60965237_60965382_60965498_60965697_60965792_60966003_60966491_60966705_60968726_60968979_60970968_60971043_60971746_60971934_60972643_60972706_60976297_60976444_60978882_60978939_60981822
ENSMUSG00000024614.8_13	chr18	+	525	7	FSM	ENSMUSG00000024614.8	ENST00000443099.6	531	7	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGGTAAGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90529401	90546080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999
ENSMUSG00000024614.8_16	chr18	+	466	6	ISM	ENSMUSG00000024614.8	ENST00000443099.6	531	7	2932	4	2932	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGGTAAGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	90532331	90546080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_90532369_90535517_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999
ENSMUSG00000024614.8_18	chr18	+	425	5	ISM	ENSMUSG00000024614.8	ENST00000443099.6	531	7	6118	8	6118	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTTATGATGGTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90535517	90546076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_90535642_90537228_90537275_90541653_90541754_90542404_90542483_90545999
ENSMUSG00000024614.8_3	chr18	+	4587	16	FSM	ENSMUSG00000024614.8	ENSMUST00000025515.7	4611	16	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATAATTGCTACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90528292	90561382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_90528502_90529402_90529458_90532328_90532369_90535517_90535642_90537228_90537275_90539080_90539162_90541653_90541754_90542404_90542483_90545999_90546067_90548183_90548283_90551106_90551165_90551344_90551399_90552505_90552563_90555198_90555329_90556622_90556692_90558062
ENSMUSG00000024617.17_0	chr18	+	2390	18	FSM	ENSMUSG00000024617.17	ENST00000672396.1	2409	18	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGAGAGGAAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61058733	61118750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61058913_61074358_61074454_61080057_61080118_61084364_61084420_61085205_61085272_61085356_61085430_61088608_61088712_61090175_61090260_61090371_61090467_61091212_61091336_61091644_61091729_61093074_61093118_61096994_61097036_61102082_61102116_61103065_61103115_61111011_61111088_61117397_61117627_61117848
ENSMUSG00000024620.12_0	chr18	+	5393	23	FSM	ENSMUSG00000024620.12	ENSMUST00000025522.11	5407	23	8	6	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATAACCGATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	61178229	61218127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61178645_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201813_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
ENSMUSG00000024620.12_8	chr18	+	5411	24	FSM	ENSMUSG00000024620.12	ENSMUST00000115274.2	5423	24	11	1	11	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAATAACCGATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	61178282	61218127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61178645_61179101_61179173_61193215_61193262_61194276_61194598_61196938_61197206_61197868_61197997_61198076_61198252_61198786_61198980_61199569_61199686_61201167_61201292_61201813_61202029_61204732_61204828_61205701_61205835_61206312_61206418_61206699_61206811_61209590_61209751_61210689_61210851_61211600_61211720_61211949_61212073_61212695_61212808_61213367_61213468_61214026_61214133_61214888_61215122_61216292
ENSMUSG00000024621.17_0	chr18	+	3846	22	FSM	ENSMUSG00000024621.17	ENSMUST00000025523.13	3870	22	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTAACACAGCCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	61238655	61264194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61238757_61238852_61239071_61242687_61242946_61243292_61243578_61245029_61245167_61245773_61245934_61247822_61248010_61250112_61250229_61250363_61250485_61250603_61250795_61252023_61252140_61257270_61257398_61257548_61257654_61257884_61257996_61258745_61258909_61260936_61261026_61261140_61261239_61262058_61262182_61262341_61262454_61262774_61262875_61263175_61263285_61263375
ENSMUSG00000024621.17_6	chr18	+	4683	21	FSM	ENSMUSG00000024621.17	ENSMUST00000115268.4	4701	21	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCACCACTGAGGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	61238933	61265213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61239071_61242687_61242946_61243292_61243578_61245029_61245167_61245773_61245934_61247822_61248010_61250112_61250229_61250363_61250485_61250603_61250795_61252023_61252140_61257270_61257398_61257548_61257654_61257884_61257996_61258745_61258909_61260936_61261026_61261140_61261239_61262058_61262182_61262341_61262454_61262774_61262875_61263175_61263285_61263375
ENSMUSG00000024622.9_0	chr18	-	5075	21	FSM	ENSMUSG00000024622.9	ENSMUST00000091884.6	5103	21	23	5	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGCAAGAGCCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	61310099	61264353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290591_61290686_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ENSMUSG00000024622.9_2	chr18	-	5112	20	FSM	ENSMUSG00000024622.9	ENSMUST00000235480.2	5131	20	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATTATCTGGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	61310059	61264372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61265668_61266923_61267134_61268542_61268660_61269298_61269433_61270474_61270695_61273862_61274048_61274730_61274863_61279500_61279629_61280318_61280621_61283440_61283591_61285256_61285356_61288099_61288198_61288331_61288505_61290414_61290834_61295968_61296101_61298556_61298656_61300267_61300766_61304279_61304455_61305222_61305359_61309649
ENSMUSG00000024639.6_0	chr19	+	5624	7	FSM	ENSMUSG00000024639.6	ENSMUST00000025541.6	5644	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATATCGCTGCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	16110208	16364821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_16110826_16196951_16197137_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ENSMUSG00000024639.6_1	chr19	+	1055	7	FSM	ENSMUSG00000024639.6	ENST00000444815.2	1077	7	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAATCTGGTCTAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	16110702	16360742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_16110826_16196951_16197141_16293380_16293536_16309440_16309570_16312344_16312475_16355520_16355675_16360567
ENSMUSG00000024640.10_0	chr19	-	2598	9	FSM	ENSMUSG00000024640.10	ENSMUST00000025542.10	2617	9	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	5514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAGGGCCAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	15902413	15882050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15902227
ENSMUSG00000024640.10_10	chr19	-	2271	9	FSM	ENSMUSG00000024640.10	ENSMUST00000162053.8	2291	9	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCCATTCATTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	15901973	15882497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_15883516_15884293_15884432_15886664_15886794_15892227_15892398_15894440_15894614_15895569_15895776_15896818_15896889_15898299_15898361_15901667
ENSMUSG00000024644.18_0	chr18	-	2113	12	FSM	ENSMUSG00000024644.18	ENSMUST00000025546.17	2124	12	6	5	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCCGTGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	84703821	84685594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962_84700053_84703727
ENSMUSG00000024644.18_2	chr18	-	2128	11	FSM	ENSMUSG00000024644.18	ENSMUST00000168419.3	2152	11	23	1	23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAACTGCCGTGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	84700161	84685594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84695443_84695533_84696832_84696996_84699059_84699204_84699962
ENSMUSG00000024644.18_8	chr18	-	1098	8	FSM	ENSMUSG00000024644.18	ENST00000324301.12	1116	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGAGAAGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	84699194	84686164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84686226_84686662_84686811_84687055_84687198_84687921_84688087_84688877_84689039_84690198_84690284_84693101_84693303_84699059
ENSMUSG00000024645.6_0	chr18	-	2404	6	FSM	ENSMUSG00000024645.6	ENSMUST00000025547.4	2418	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	84969641	84964321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84965871_84965958_84966065_84966147_84966222_84967318_84967417_84967514_84967578_84969127
ENSMUSG00000024646.15_0	chr18	+	814	5	FSM	ENSMUSG00000024646.15	ENSMUST00000160180.9	833	5	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATATGTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	84869473	84897988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_84869733_84889629_84889759_84891264_84891295_84895951_84895987_84897627
ENSMUSG00000024646.15_1	chr18	+	333	3	FSM	ENSMUSG00000024646.15	ENST00000553543.2	346	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGGCTGTAGCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	84869608	84897660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_84869733_84889629_84889779_84897600
ENSMUSG00000024646.15_4	chr18	+	709	4	FSM	ENSMUSG00000024646.15	ENST00000494131.6	724	4	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTATACCATATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84869608	84897983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_84869733_84889629_84889759_84895886_84895987_84897627
ENSMUSG00000024647.15_0	chr18	+	533	3	FSM	ENSMUSG00000024647.15	ENST00000584764.5	538	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTTGACTATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	86729836	86735053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_86729902_86734400_86734521_86734705
ENSMUSG00000024647.15_2	chr18	+	465	2	ISM	ENSMUSG00000024647.15	ENST00000584764.5	538	3	4567	5	3231	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCTTTGACTATTGACA	NA	NA	NA	NA	NA	NA	NA	NA	86734403	86735053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_86734521_86734705
ENSMUSG00000024650.6_0	chr19	+	1944	10	FSM	ENSMUSG00000024650.6	ENST00000360421.9	1956	10	7	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCCCACCATCTATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	8595396	8603620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8596011_8596366_8596471_8596678_8596834_8598554_8598724_8599149_8599274_8599405_8599522_8600827_8601043_8601183_8601293_8602996_8603205_8603490
ENSMUSG00000024654.9_0	chr19	-	4181	7	FSM	ENSMUSG00000024654.9	ENSMUST00000049948.6	4195	7	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTCTGACTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	9112994	9087239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_9090573_9091547_9091659_9093865_9093985_9095892_9096051_9096551_9096695_9112150_9112352_9112878
ENSMUSG00000024659.16_3	chr19	-	1655	13	FSM	ENSMUSG00000024659.16	ENSMUST00000025561.8	1674	13	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	25336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACAATTGGTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	20368298	20350800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_20351135_20352588_20352712_20354015_20354075_20354970_20355067_20355759_20355854_20357012_20357070_20357703_20357784_20359413_20359505_20360225_20360340_20361120_20361216_20361838_20361948_20362056_20362137_20367975
ENSMUSG00000024660.10_0	chr19	-	3218	18	FSM	ENSMUSG00000024660.10	ENSMUST00000025562.9	3236	18	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGGTCTGCAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	9876904	9849666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_9850238_9851583_9851735_9852179_9852288_9852461_9852541_9853953_9854181_9855040_9855161_9855491_9855613_9855682_9855793_9861062_9861198_9861268_9861384_9861801_9861854_9862836_9862952_9863070_9863129_9864038_9864091_9870636_9871374_9872202_9872317_9872684_9872836_9876702
ENSMUSG00000024661.8_0	chr19	+	1480	5	FSM	ENSMUSG00000024661.8	ENSMUST00000235196.2	1494	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCTTCTTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	9957971	9962452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9958255_9959731_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024661.8_8	chr19	+	913	4	FSM	ENSMUSG00000024661.8	ENSMUST00000025563.8	929	4	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTTTCTTTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	9960019	9962456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9960348_9961544_9961692_9961923_9962050_9962144
ENSMUSG00000024663.21_0	chr19	+	2291	10	FSM	ENSMUSG00000024663.21	ENSMUST00000149967.9	2305	10	8	6	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	9992415	10012819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9992650_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024663.21_1	chr19	+	5139	10	FSM	ENSMUSG00000024663.21	ENSMUST00000113161.10	5146	10	7	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTAGGGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	9995563	10015741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024663.21_2	chr19	+	5288	11	FSM	ENSMUSG00000024663.21	ENSMUST00000238672.2	5293	11	5	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTAGGGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	9995561	10015741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10005648_10005868_10006837_10006985_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024663.21_3	chr19	+	1992	9	FSM	ENSMUSG00000024663.21	ENSMUST00000117641.8	2004	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCTAGGCGGCAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	9995569	10012819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9995724_10003893_10004150_10004747_10004844_10004923_10005002_10007513_10007643_10007732_10007846_10009716_10009817_10011107_10011175_10011820
ENSMUSG00000024664.6_0	chr19	+	3673	12	FSM	ENSMUSG00000024664.6	ENSMUST00000115995.4	3687	12	12	2	12	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACCCCTGCCTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	10018944	10037472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10019321_10029565_10029677_10030199_10030398_10031383_10031486_10031590_10031714_10031969_10032031_10032470_10032548_10032960_10033059_10033354_10033452_10033580_10033661_10033788_10033915_10035248
ENSMUSG00000024665.9_0	chr19	-	3130	12	FSM	ENSMUSG00000024665.9	ENSMUST00000025567.9	3150	12	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTCACTTGCCTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	10079097	10040135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10078586
ENSMUSG00000024665.9_4	chr19	-	1345	12	FSM	ENSMUSG00000024665.9	ENST00000522056.5	1362	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGTTCTCATGAGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	10160622	10041548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10041679_10042049_10042176_10042965_10043046_10043615_10043713_10043878_10043977_10047635_10047713_10047927_10047989_10059928_10060055_10066065_10066168_10066271_10066470_10069104_10069216_10160483
ENSMUSG00000024666.7_0	chr19	-	1577	5	FSM	ENSMUSG00000024666.7	ENSMUST00000025568.3	1590	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554713	10547841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUSG00000024666.7_1	chr19	-	1522	5	FSM	ENSMUSG00000024666.7	ENSMUST00000236099.2	1529	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGGTGTCTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	10554444	10547841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10548633_10548892_10548969_10552200_10552373_10552603_10552876_10554233
ENSMUSG00000024666.7_2	chr19	-	1548	3	ISM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	1611	6	1591	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTCTGTCTTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	10552860	10547849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10548969_10552200_10552373_10552603
ENSMUSG00000024666.7_3	chr19	-	1585	4	FSM	ENSMUSG00000024666.7	ENSMUST00000236185.2	1593	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTCTGTCTGTCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	10554471	10547851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10548969_10552200_10552373_10552603_10552876_10554447
ENSMUSG00000024667.13_0	chr19	-	1092	5	FSM	ENSMUSG00000024667.13	ENSMUST00000025569.9	1101	5	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGCTGGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	10533598	10527829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533478
ENSMUSG00000024667.13_1	chr19	-	932	4	ISM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	591	10	591	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAACACAAAATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	10532524	10527865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426
ENSMUSG00000024667.13_2	chr19	-	988	5	FSM	ENSMUSG00000024667.13	ENSMUST00000059582.9	999	5	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAAACACAAAATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	10533114	10527865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10528405_10529136_10529339_10531892_10531986_10532426_10532529_10533062
ENSMUSG00000024668.9_0	chr19	-	2975	4	FSM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAGCAGCTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	10502479	10477903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10480494_10494343_10494454_10494532_10494751_10502422
ENSMUSG00000024668.9_1	chr19	-	2912	3	ISM	ENSMUSG00000024668.9	ENSMUST00000025570.8	2981	4	7735	6	3	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAGCAGCTCCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	10494744	10477903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10480494_10494343_10494454_10494532
ENSMUSG00000024668.9_4	chr19	-	369	2	FSM	ENSMUSG00000024668.9	ENST00000543265.1	386	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATAGAAACTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	10494738	10480330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10480494_10494532
ENSMUSG00000024678.7_0	chr19	+	1493	7	FSM	ENSMUSG00000024678.7	ENSMUST00000025581.7	1513	7	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAATCAGAGCACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	11514177	11535824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_11514525_11525842_11526003_11527629_11527750_11530195_11530253_11532167_11532291_11533555_11533658_11535240
ENSMUSG00000024680.13_0	chr19	-	625	6	FSM	ENSMUSG00000024680.13	ENST00000617306.1	636	6	6	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAGTATAATCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	11601013	11594812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_11594936_11595779_11595879_11596217_11596374_11596980_11597038_11600046_11600147_11600923
ENSMUSG00000024680.13_3	chr19	-	538	5	ISM	ENSMUSG00000024680.13	ENST00000617306.1	636	6	870	5	858	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAAGTATAATCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	11600149	11594812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_11594936_11595779_11595879_11596217_11596374_11596980_11597038_11600046
ENSMUSG00000024683.7_0	chr19	+	1140	4	FSM	ENSMUSG00000024683.7	ENSMUST00000167199.3	1162	4	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	11747760	11752308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_11747889_11748165_11748232_11750238_11750388_11751511
ENSMUSG00000024687.12_0	chr19	+	4466	14	FSM	ENSMUSG00000024687.12	ENSMUST00000025590.11	4488	14	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTATATTGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	11943319	11971469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_11943661_11948050_11948260_11951021_11951273_11955165_11955365_11955600_11955704_11955994_11956050_11956232_11956365_11961267_11961514_11961755_11961877_11965712_11965817_11966568_11966665_11967964_11968147_11968958_11969180_11969263
ENSMUSG00000024691.14_0	chr19	+	3661	4	FSM	ENSMUSG00000024691.14	ENSMUST00000151307.8	3687	4	26	0	26	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTTCTTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	12545587	12567124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12546192_12550894_12550945_12554453_12554535_12564198
ENSMUSG00000024691.14_2	chr19	+	3897	5	FSM	ENSMUSG00000024691.14	ENSMUST00000144662.8	3912	5	9	6	9	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTCTTTAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	12545570	12567126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12546192_12550877_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUSG00000024691.14_21	chr19	+	3262	4	FSM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	3	2	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTTCTTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	12550889	12567124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUSG00000024691.14_23	chr19	+	3200	3	ISM	ENSMUSG00000024691.14	ENSMUST00000025595.5	3267	4	3574	2	3574	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTGTTTTCTTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	12554460	12567124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_12554535_12561286_12561487_12564198
ENSMUSG00000024691.14_5	chr19	+	3896	5	NNC	ENSMUSG00000024691.14	novel	3912	5	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTAGTTATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	12545583	12567132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr19_+_12546191_12550870_12550945_12554453_12554535_12561286_12561487_12564198
ENSMUSG00000024696.10_0	chr19	+	1082	7	FSM	ENSMUSG00000024696.10	ENST00000528489.1	1093	7	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACAGTAGTTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	12781304	12810707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12781455_12796699_12796800_12801307_12801476_12802162_12802337_12802453_12802536_12809971_12810121_12810448
ENSMUSG00000024712.10_0	chr19	+	2471	4	FSM	ENSMUSG00000024712.10	ENSMUST00000025617.4	2482	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGAATCCTGTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17371415	17378711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_17371757_17372561_17372714_17375941_17376045_17376836
ENSMUSG00000024725.14_0	chr19	-	2700	10	FSM	ENSMUSG00000024725.14	ENSMUST00000025631.7	2726	10	11	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTTAAAAATATTCT	NA	NA	NA	NA	NA	NA	NA	NA	18609142	18556706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_18558693_18562005_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581577_18608983
ENSMUSG00000024725.14_7	chr19	-	526	8	ISM	ENSMUSG00000024725.14	ENST00000550242.1	579	9	27448	12	27448	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGCAGCAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	18581569	18562027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529
ENSMUSG00000024725.14_8	chr19	-	567	9	FSM	ENSMUSG00000024725.14	ENST00000550242.1	579	9	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGCAGCAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	18609017	18562027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714_18573766_18581529_18581571_18608977
ENSMUSG00000024725.14_9	chr19	-	485	7	ISM	ENSMUSG00000024725.14	ENST00000550242.1	579	9	35253	12	35253	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAAGCAGCAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	18573764	18562027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_18562108_18563910_18563990_18567068_18567119_18567764_18567873_18569946_18570001_18571219_18571284_18573714
ENSMUSG00000024726.11_0	chr19	+	4503	8	FSM	ENSMUSG00000024726.11	ENSMUST00000025632.11	4518	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCTGTCTCACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	18648139	18684561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_18648567_18655051_18655248_18656467_18656632_18667593_18667735_18668780_18668960_18671012_18671127_18680724_18680829_18681383
ENSMUSG00000024732.8_0	chr19	-	2995	4	FSM	ENSMUSG00000024732.8	ENSMUST00000025639.7	3003	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCACCTTGCTCCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	10926622	10918844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10920654_10920841_10920917_10922646_10922777_10925641
ENSMUSG00000024734.9_0	chr19	-	1362	9	FSM	ENSMUSG00000024734.9	ENST00000278853.9	1379	9	4	13	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCCTGAAAGCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	10897844	10891662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10891714_10893797_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065_10896430_10896743_10896866_10897767
ENSMUSG00000024734.9_1	chr19	-	1286	8	ISM	ENSMUSG00000024734.9	ENST00000278853.9	1379	9	982	13	982	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCCTGAAAGCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	10896866	10891662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10891714_10893797_10893988_10894081_10894210_10895000_10895099_10895260_10895449_10895832_10895977_10896065_10896430_10896743
ENSMUSG00000024735.14_0	chr19	+	2113	16	FSM	ENSMUSG00000024735.14	ENSMUST00000025642.14	2134	16	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGTAAACAGTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	10872605	10882886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876346_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUSG00000024735.14_4	chr19	+	6029	16	FSM	ENSMUSG00000024735.14	ENSMUST00000179297.3	6035	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATATATGTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	10872777	10886917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10872833_10874866_10875017_10875180_10875258_10876289_10876489_10876568_10876643_10876733_10876797_10877538_10877581_10877687_10877763_10878053_10878130_10878290_10878401_10879707_10879864_10880065_10880136_10880331_10880418_10880654_10880826_10881001_10881108_10882398
ENSMUSG00000024735.14_6	chr19	+	531	4	FSM	ENSMUSG00000024735.14	ENST00000584766.1	543	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTACAGGTAGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	10879716	10881098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10879864_10880065_10880182_10880654_10880826_10881001
ENSMUSG00000024736.16_0	chr19	-	3648	11	FSM	ENSMUSG00000024736.16	ENSMUST00000025645.14	3657	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGTGACACTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	10847296	10835186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10836516_10836927_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ENSMUSG00000024736.16_4	chr19	-	3854	10	FSM	ENSMUSG00000024736.16	ENSMUST00000120524.2	3895	10	29	12	29	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGAATGGGCATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	10847113	10835209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10837120_10837487_10837762_10838893_10839097_10840586_10840731_10840828_10841025_10841318_10841469_10842619_10842952_10843832_10844052_10844293_10844509_10846902
ENSMUSG00000024737.3_0	chr19	+	1698	7	FSM	ENSMUSG00000024737.3	ENST00000681882.1	1708	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACCATAGTCCATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	10820388	10835275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10832272_10832442_10833251_10833411_10834993
ENSMUSG00000024737.3_4	chr19	+	1527	6	FSM	ENSMUSG00000024737.3	ENST00000681951.1	1539	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACCATAGTCCATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	10820390	10835275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10820943_10825868_10826153_10830492_10830641_10831623_10831726_10833251_10833411_10834993
ENSMUSG00000024740.11_0	chr19	+	4440	27	FSM	ENSMUSG00000024740.11	ENSMUST00000025649.10	4459	27	8	11	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCTAAGAAGAAACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	10582698	10607172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_24	chr19	+	3889	25	FSM	ENSMUSG00000024740.11	ENST00000680717.1	3912	25	11	12	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCTAAGAAGAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	10582908	10607170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10583131_10584208_10584358_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_41	chr19	+	4092	27	FSM	ENSMUSG00000024740.11	ENST00000681935.1	4113	27	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAGTAGAATCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	10582936	10607161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602629_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_55	chr19	+	3987	25	FSM	ENSMUSG00000024740.11	ENST00000679712.1	4008	25	9	12	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCTAAGAAGAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	10582936	10607170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10583131_10584208_10584358_10585156_10585274_10585614_10585837_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024740.11_93	chr19	+	4109	27	FSM	ENSMUSG00000024740.11	ENST00000679588.1	4132	27	11	12	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATCTAAGAAGAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	10583185	10607170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10583289_10584208_10584358_10585156_10585274_10585614_10585837_10588065_10588181_10589007_10589106_10590236_10590396_10591471_10591556_10592215_10592333_10592851_10592955_10596412_10596489_10596583_10596693_10598904_10599084_10599184_10599349_10599425_10599534_10599653_10599862_10600702_10600799_10600890_10601003_10602087_10602212_10602530_10602696_10603259_10603355_10603955_10604127_10604489_10604600_10604852_10605023_10605125_10605229_10605788_10605913_10606442
ENSMUSG00000024742.16_0	chr19	-	2357	3	FSM	ENSMUSG00000024742.16	ENSMUST00000156291.2	2373	3	6	10	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACCAGAATGTGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	10181527	10176505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10178462_10181051_10181384_10181458
ENSMUSG00000024742.16_1	chr19	-	2307	2	FSM	ENSMUSG00000024742.16	ENSMUST00000025651.6	2341	2	24	10	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGTGACCAGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	10181408	10176511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10178462_10181051
ENSMUSG00000024742.16_4	chr19	-	2074	2	FSM	ENSMUSG00000024742.16	ENSMUST00000116542.9	2100	2	11	15	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATAAAAGTGACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	10181296	10176516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10178462_10181167
ENSMUSG00000024742.16_6	chr19	-	2105	2	FSM	ENSMUSG00000024742.16	ENSMUST00000142241.2	2152	2	21	26	21	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACAATAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	10181237	10176531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10178462_10181062
ENSMUSG00000024750.12_0	chr19	+	7366	6	FSM	ENSMUSG00000024750.12	ENSMUST00000237651.2	7385	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCCAGAAGAGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	21249653	21264197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21250107_21253789_21253950_21254341_21254454_21255018_21255123_21256988_21257115_21257786
ENSMUSG00000024754.14_0	chr19	+	6654	25	FSM	ENSMUSG00000024754.14	ENSMUST00000096194.9	6667	25	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTATGTGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	21755712	21835685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21756151_21757534_21757617_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ENSMUSG00000024754.14_12	chr19	+	4592	22	FSM	ENSMUSG00000024754.14	ENST00000377066.9	4616	22	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGAGGAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21770010	21834341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ENSMUSG00000024754.14_4	chr19	+	6593	24	FSM	ENSMUSG00000024754.14	ENSMUST00000025663.8	6602	24	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTCAGATTCTAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	21755730	21835724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21756151_21770001_21770345_21774690_21774832_21775230_21775793_21779225_21779396_21784722_21784912_21786632_21786803_21789130_21789341_21789574_21789781_21789914_21789985_21792794_21792924_21795286_21795376_21801151_21801284_21802453_21802490_21803403_21803560_21807163_21807342_21809390_21809607_21812781_21812991_21819404_21819588_21821983_21822204_21825300_21825400_21829588_21829744_21833022_21833127_21833518
ENSMUSG00000024757.8_0	chr19	-	304	2	FSM	ENSMUSG00000024757.8	ENST00000417740.5	324	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTAGGAGGAGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	7688440	7659300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7659321_7688156
ENSMUSG00000024757.8_5	chr19	-	291	1	ISM	ENSMUSG00000024757.8	ENSMUST00000025666.8	1998	10	228	37731	3	-28866	mono-exon	FALSE	NA	NA	NA	NA	NA	171	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTTAATTCCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	7688447	7688156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_7688200_7688400
ENSMUSG00000024758.16_0	chr19	-	2746	7	FSM	ENSMUSG00000024758.16	ENSMUST00000088169.7	2762	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTCATCAGTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	7460557	7403271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7460303
ENSMUSG00000024758.16_11	chr19	-	2879	8	FSM	ENSMUSG00000024758.16	ENSMUST00000025667.14	2898	8	13	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCTCATCAGTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	7460633	7403271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7405241_7407115_7407175_7408350_7408398_7409330_7409401_7409816_7409956_7412295_7412504_7445175_7445233_7460303
ENSMUSG00000024758.16_26	chr19	-	1352	4	FSM	ENSMUSG00000024758.16	ENST00000354497.4	1368	4	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAAGAAAAATAATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	7460498	7404350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7405241_7407115_7407175_7412295_7412504_7460303
ENSMUSG00000024759.15_0	chr19	+	7531	13	FSM	ENSMUSG00000024759.15	ENSMUST00000170373.9	7540	13	0	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTGAATTGTGGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	7471404	7517030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7471727_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ENSMUSG00000024759.15_2	chr19	+	4338	13	FSM	ENSMUSG00000024759.15	ENSMUST00000025668.9	4368	13	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTGGCTGGAAATAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	7471825	7513958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7472027_7486712_7486928_7487347_7487492_7494242_7494348_7495910_7495962_7498151_7498209_7498474_7498568_7499433_7499573_7506306_7506435_7506972_7507030_7507884_7507957_7509380_7509813_7511314
ENSMUSG00000024764.11_0	chr19	-	3219	8	FSM	ENSMUSG00000024764.11	ENSMUST00000025675.11	3231	8	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGGGATGGCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	7218537	7203038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7205457_7205716_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUSG00000024764.11_3	chr19	-	3316	7	FSM	ENSMUSG00000024764.11	ENSMUST00000236769.2	3324	7	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTTTATTTGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	7218417	7203081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7205795_7207086_7207171_7207312_7207472_7207552_7207649_7211468_7211522_7212427_7212524_7218302
ENSMUSG00000024767.12_0	chr19	-	1702	7	FSM	ENSMUSG00000024767.12	ENSMUST00000025679.11	1713	7	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTGGCCCATGCATC	NA	NA	NA	NA	NA	NA	NA	NA	7183670	7175566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183566
ENSMUSG00000024767.12_4	chr19	-	1719	7	FSM	ENSMUSG00000024767.12	ENSMUST00000123594.8	1728	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTCTGCTGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	7183590	7175574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7176605_7176736_7176932_7177027_7177113_7177307_7177427_7181422_7181522_7181754_7181817_7183461
ENSMUSG00000024772.10_0	chr19	+	3337	5	FSM	ENSMUSG00000024772.10	ENSMUST00000025684.4	3353	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTCTCATGCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6326764	6350120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6327409_6331247_6331346_6344243_6344657_6347562_6347728_6348103
ENSMUSG00000024773.16_0	chr19	+	6358	40	FSM	ENSMUSG00000024773.16	ENSMUST00000045351.13	6371	40	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCCAGTCTGCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	6291703	6312358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6291997_6294456_6294620_6294716_6294870_6295075_6295179_6295488_6295724_6296333_6296431_6296517_6296680_6296781_6296923_6297668_6297907_6297992_6298141_6298226_6298320_6299801_6299958_6300053_6300298_6300442_6300540_6300625_6300786_6301288_6301432_6301517_6301634_6301735_6301894_6302456_6302608_6302719_6302914_6303017_6303099_6303363_6303471_6303553_6303647_6304388_6304460_6304619_6304697_6305130_6305296_6305438_6305569_6305648_6305858_6306197_6306407_6306581_6306718_6307468_6307673_6307806_6307909_6307992_6308075_6308163_6308297_6308390_6308464_6308580_6308664_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024773.16_5	chr19	+	1496	6	FSM	ENSMUSG00000024773.16	ENST00000421419.3	1508	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTGGAATAAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	6291759	6312296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6291997_6294456_6294620_6308893_6309016_6310018_6310174_6311401_6311555_6311630
ENSMUSG00000024776.19_0	chr19	+	1973	11	FSM	ENSMUSG00000024776.19	ENSMUST00000239240.2	1988	11	4	11	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34169632	34217722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34169996_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUSG00000024776.19_2	chr19	+	2007	11	FSM	ENSMUSG00000024776.19	ENSMUST00000054956.15	2024	11	6	11	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAACAAGCTGTCCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34169634	34217722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34170032_34197586_34197667_34203941_34204160_34207492_34207569_34208830_34208927_34211360_34211719_34212609_34212735_34213675_34213814_34216175_34216289_34216902_34217003_34217416
ENSMUSG00000024777.11_0	chr19	-	2718	14	FSM	ENSMUSG00000024777.11	ENSMUST00000025695.10	2742	14	16	8	-13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAAGCATTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6285886	6277802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285130_6285541
ENSMUSG00000024777.11_2	chr19	-	2690	14	FSM	ENSMUSG00000024777.11	ENST00000164133.7	2710	14	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCAAGCATTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6285861	6277802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6278562_6278971_6279074_6279251_6279380_6280185_6280306_6280415_6280467_6280531_6280586_6280936_6281046_6281145_6281206_6282299_6282431_6282557_6282651_6282796_6282899_6283806_6284004_6284662_6285127_6285541
ENSMUSG00000024778.14_0	chr19	+	1472	9	FSM	ENSMUSG00000024778.14	ENSMUST00000025691.13	1481	9	2	7	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTATTGCTCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34268067	34305165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34268145_34284524_34284679_34292578_34292717_34293968_34294078_34295989_34296052_34296182_34296237_34296709_34296790_34297960_34297986_34304392
ENSMUSG00000024778.14_1	chr19	+	1396	8	ISM	ENSMUSG00000024778.14	ENSMUST00000025691.13	1481	9	16458	7	16442	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTATTGCTCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34284523	34305165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_34284679_34292578_34292717_34293968_34294078_34295989_34296052_34296182_34296237_34296709_34296790_34297960_34297986_34304392
ENSMUSG00000024780.8_0	chr19	+	4043	7	FSM	ENSMUSG00000024780.8	ENSMUST00000225310.2	4079	7	23	13	-6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGATAAGAGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	28967774	28993158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28990187
ENSMUSG00000024780.8_1	chr19	+	2936	7	FSM	ENSMUSG00000024780.8	ENSMUST00000224511.2	2944	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTCTCATTGCTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	28967788	29004081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_29002203
ENSMUSG00000024780.8_2	chr19	+	1730	5	FSM	ENSMUSG00000024780.8	ENSMUST00000224599.2	1769	5	20	19	5	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28967904	28986048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972
ENSMUSG00000024780.8_3	chr19	+	5162	7	FSM	ENSMUSG00000024780.8	ENSMUST00000050148.5	5179	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCCAAGCTGTAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	28967907	28997628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28968070_28972440_28972723_28976660_28976752_28984371_28984488_28984972_28985096_28989288_28989454_28993405
ENSMUSG00000024781.17_0	chr19	-	2952	10	FSM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34504861	34469717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502243_34504765
ENSMUSG00000024781.17_1	chr19	-	2961	10	FSM	ENSMUSG00000024781.17	ENSMUST00000049572.15	2969	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34504866	34469717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137_34502247_34504765
ENSMUSG00000024781.17_2	chr19	-	2861	9	ISM	ENSMUSG00000024781.17	ENSMUST00000178114.2	2965	10	2627	0	2627	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATCGGTGTGGTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34502247	34469717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_34471614_34472459_34472532_34477496_34477569_34478902_34479050_34484408_34484546_34486388_34486499_34488222_34488422_34500821_34500940_34502137
ENSMUSG00000024782.8_0	chr19	-	2793	5	FSM	ENSMUSG00000024782.8	ENSMUST00000025696.5	2809	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTACCCGGGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	29025352	28998239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29015271_29015392_29025078
ENSMUSG00000024782.8_5	chr19	-	627	4	FSM	ENSMUSG00000024782.8	ENST00000447596.4	638	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGGCAGCAACTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	29025293	29000226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29000347_29003611_29003731_29004570_29004744_29025078
ENSMUSG00000024785.8_0	chr19	+	1793	9	FSM	ENSMUSG00000024785.8	ENSMUST00000064393.6	1803	9	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTGCACTGTAGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	29078784	29121243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29079041_29093122_29093195_29095624_29095801_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024785.8_6	chr19	+	948	8	FSM	ENSMUSG00000024785.8	ENST00000442869.5	966	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATCCTGTACAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	29078896	29120686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29079041_29093122_29093195_29098669_29098745_29099165_29099291_29105398_29105525_29108049_29108207_29111799_29111904_29120541
ENSMUSG00000024787.15_0	chr19	-	1619	8	FSM	ENSMUSG00000024787.15	ENSMUST00000025702.14	1635	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAACCAGGTCCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	6178325	6169435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6169985_6170515_6170774_6171408_6171553_6171812_6171961_6172069_6172186_6173859_6173981_6174182_6174219_6178078
ENSMUSG00000024789.14_0	chr19	+	4919	24	FSM	ENSMUSG00000024789.14	ENSMUST00000025705.7	4947	24	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGTAATTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	29229245	29290470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29229519_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ENSMUSG00000024789.14_1	chr19	+	5020	25	FSM	ENSMUSG00000024789.14	ENSMUST00000065796.10	5030	25	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTGTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29229232	29290475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29229519_29229836_29229920_29239582_29239834_29248750_29248875_29252401_29252520_29254149_29254296_29259716_29260039_29260941_29261062_29262236_29262395_29263700_29263813_29265300_29265488_29266073_29266202_29268566_29268702_29272255_29272344_29273041_29273170_29273909_29274049_29275692_29275845_29275987_29276139_29276878_29277016_29278308_29278499_29279011_29279137_29279298_29279472_29286994_29287113_29288327_29288442_29289140
ENSMUSG00000024790.9_1	chr19	-	1429	2	FSM	ENSMUSG00000024790.9	ENSMUST00000113533.3	1442	2	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATAACAGGAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6168671	6166033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6166618_6167826
ENSMUSG00000024790.9_3	chr19	-	1210	2	FSM	ENSMUSG00000024790.9	ENST00000398846.6	1234	2	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATAAAAGGAACTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	6168433	6166061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6166618_6167779
ENSMUSG00000024791.11_0	chr19	+	2015	6	FSM	ENSMUSG00000024791.11	ENSMUST00000025704.3	2024	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGCAGACTGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6135018	6141804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6135239_6135427_6135520_6136431_6136498_6136581_6136618_6140080_6140555_6140677
ENSMUSG00000024792.10_0	chr19	-	1273	8	FSM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAAACCTTCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	6134968	6130800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381_6134492_6134893
ENSMUSG00000024792.10_1	chr19	-	1341	8	FSM	ENSMUSG00000024792.10	ENSMUST00000237738.2	1357	8	10	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACCTTCTGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	6134976	6130797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134079_6134381_6134492_6134824
ENSMUSG00000024792.10_2	chr19	-	1201	7	ISM	ENSMUSG00000024792.10	ENSMUST00000025707.9	1287	8	481	7	481	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAAACCTTCTGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	6134492	6130798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_6131245_6131876_6131995_6132210_6132358_6132428_6132502_6132614_6132809_6133978_6134091_6134381
ENSMUSG00000024793.15_0	chr4	+	1648	10	FSM	ENSMUSG00000024793.15	ENSMUST00000025706.10	1661	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTCAGTGGGAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	152200403	152204576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152200572_152201041_152201181_152201387_152201523_152201834_152202000_152202096_152202152_152202703_152202760_152202857_152202957_152203146_152203185_152203616_152203801_152203967
ENSMUSG00000024793.15_1	chr4	+	1324	7	FSM	ENSMUSG00000024793.15	ENST00000377782.7	1335	7	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCTGGCTGCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	152201070	152204413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152201181_152201387_152201523_152201834_152202017_152202096_152202152_152202682_152202808_152203529_152203801_152203967
ENSMUSG00000024795.12_0	chr19	+	5549	32	FSM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTAATATACCGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34899765	34953125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUSG00000024795.12_24	chr19	+	5422	32	FSM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGGCTCTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34899791	34953144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34899834_34902024_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUSG00000024795.12_45	chr19	+	5481	31	ISM	ENSMUSG00000024795.12	ENSMUST00000087341.7	5564	32	2264	10	2233	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTAATATACCGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	34902024	34953125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918612_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUSG00000024795.12_47	chr19	+	5375	31	ISM	ENSMUSG00000024795.12	ENSMUST00000223907.2	5423	32	2238	1	2238	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAAGGCTCTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34902029	34953144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_34902173_34906260_34906348_34906426_34906544_34907083_34907223_34908954_34909140_34911813_34911851_34912307_34912533_34913025_34913138_34914176_34914249_34914337_34914485_34914713_34914874_34915652_34915941_34917187_34917328_34917492_34917632_34918732_34918842_34919907_34919943_34924983_34925126_34927140_34928375_34928890_34929030_34930270_34930391_34932111_34932173_34933350_34933477_34934816_34934945_34936815_34936972_34943446_34943624_34945515_34945627_34947319_34947518_34949796_34949899_34950258_34950410_34951827_34951971_34952892
ENSMUSG00000024797.15_1	chr19	-	2651	10	FSM	ENSMUSG00000024797.15	ENSMUST00000025711.13	2675	10	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAGATCAATGAACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	6127248	6117882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6118406_6118884_6118973_6119055_6119178_6119494_6119714_6119887_6120104_6120468_6121187_6121295_6121516_6121591_6121739_6126392_6126523_6126980
ENSMUSG00000024797.15_10	chr19	-	807	2	FSM	ENSMUSG00000024797.15	ENSMUST00000160590.2	840	2	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTATTAGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	6127207	6125942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6126523_6126980
ENSMUSG00000024799.17_0	chr19	-	1442	10	FSM	ENSMUSG00000024799.17	ENSMUST00000025713.12	1471	10	22	7	-17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTCCTGTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6117850	6112857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6113104_6113353_6113477_6113556_6113638_6113851_6114021_6114108_6114229_6116340_6116445_6116528_6116724_6116997_6117053_6117152_6117350_6117698
ENSMUSG00000024799.17_4	chr19	-	702	4	FSM	ENSMUSG00000024799.17	ENSMUST00000160417.8	718	4	10	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAGAGAGAGAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	6117870	6116164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6116445_6116528_6116724_6116997_6117053_6117698
ENSMUSG00000024799.17_6	chr19	-	718	5	FSM	ENSMUSG00000024799.17	ENSMUST00000161528.2	732	5	11	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACCTATGGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	6117874	6116219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6116445_6116528_6116594_6116997_6117053_6117152_6117350_6117698
ENSMUSG00000024800.9_0	chr19	+	1136	11	FSM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGGATTTTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	36061134	36082172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36061219_36062465_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUSG00000024800.9_4	chr19	+	1052	10	ISM	ENSMUSG00000024800.9	ENSMUST00000025714.9	1145	11	1335	5	1335	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATGGATTTTTAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	36062465	36082172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_36062522_36064358_36064416_36064723_36064799_36066538_36066611_36071775_36071866_36077571_36077689_36078208_36078239_36078633_36078672_36079220_36079301_36081735
ENSMUSG00000024803.10_0	chr19	-	2004	9	FSM	ENSMUSG00000024803.10	ENSMUST00000237142.2	2020	9	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCGGCCGTGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	36097490	36089371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_36090218_36092376_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096799_36097154
ENSMUSG00000024803.10_6	chr19	-	1806	9	FSM	ENSMUSG00000024803.10	ENSMUST00000025718.10	1818	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTCGGCCGTGTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	36097304	36089371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_36090218_36092388_36092476_36092598_36092698_36092872_36092972_36094170_36094270_36095233_36095342_36095625_36095764_36096618_36096799_36097154
ENSMUSG00000024805.17_1	chr19	+	6420	9	FSM	ENSMUSG00000024805.17	ENSMUST00000225920.2	6443	9	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATTGTTGGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36325724	36438363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36325970_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ENSMUSG00000024805.17_2	chr19	+	1492	9	FSM	ENSMUSG00000024805.17	ENSMUST00000071267.14	1508	9	0	16	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAAAAAAAAACCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	36356467	36433588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36356560_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ENSMUSG00000024805.17_3	chr19	+	1569	10	FSM	ENSMUSG00000024805.17	ENSMUST00000225411.2	1626	10	39	18	39	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	36387186	36433574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36427963_36428024_36433020
ENSMUSG00000024805.17_4	chr19	+	1537	9	FSM	ENSMUSG00000024805.17	ENSMUST00000062389.6	1566	9	11	18	11	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATAAACAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	36387158	36433574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36387310_36389355_36389637_36411969_36412067_36414554_36414611_36414702_36414763_36417398_36417548_36420243_36420343_36422387_36422478_36433020
ENSMUSG00000024807.19_0	chr19	+	3451	16	FSM	ENSMUSG00000024807.19	ENSMUST00000138532.8	3464	16	5	8	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGATTGGTAGAACGT	NA	NA	NA	NA	NA	NA	NA	NA	6096610	6103734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ENSMUSG00000024807.19_1	chr19	+	3327	16	FSM	ENSMUSG00000024807.19	ENSMUST00000156550.8	3363	16	31	5	31	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATGATTGGTAGAACGT	NA	NA	NA	NA	NA	NA	NA	NA	6096722	6103734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6097159_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102589
ENSMUSG00000024807.19_2	chr19	+	3144	16	FSM	ENSMUSG00000024807.19	ENSMUST00000134667.8	3159	16	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTGCATTAATGATT	NA	NA	NA	NA	NA	NA	NA	NA	6097109	6103724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6097361_6097946_6098096_6098304_6098398_6098484_6098638_6098724_6098774_6099179_6099284_6099800_6099928_6100021_6100122_6100199_6100266_6100354_6100472_6100551_6100716_6100970_6101100_6101184_6101341_6101422_6101610_6102357_6102510_6102577
ENSMUSG00000024810.17_0	chr19	+	2528	8	FSM	ENSMUSG00000024810.17	ENSMUST00000120388.9	2537	8	1	8	1	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAAAGCGCTCCAACGT	NA	NA	NA	NA	NA	NA	NA	NA	29902514	29938110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29902562_29927059_29927168_29929375_29929502_29930129_29930241_29931942_29932069_29932600_29932652_29934300_29934399_29936249
ENSMUSG00000024810.17_1	chr19	+	2537	8	FSM	ENSMUSG00000024810.17	ENSMUST00000025724.9	2544	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACGTGTGACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	29923189	29938097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29923259_29927059_29927168_29929375_29929502_29930129_29930241_29931942_29932069_29932600_29932652_29934300_29934399_29936249
ENSMUSG00000024810.17_3	chr19	+	2470	7	ISM	ENSMUSG00000024810.17	ENSMUST00000025724.9	2544	8	3868	7	3868	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACGTGTGACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	29927057	29938097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_29927168_29929375_29929502_29930129_29930241_29931942_29932069_29932600_29932652_29934300_29934399_29936249
ENSMUSG00000024811.12_0	chr19	+	6457	27	FSM	ENSMUSG00000024811.12	ENSMUST00000025729.12	6481	27	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTAATAGTTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36811646	36870868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36812137_36822933_36823159_36826688_36826785_36828899_36828937_36829877_36829954_36830201_36830297_36832290_36832358_36835202_36835390_36836454_36836577_36839485_36839578_36839686_36839766_36843351_36843524_36845039_36845120_36849012_36849159_36849822_36849989_36851196_36851417_36852663_36852774_36853584_36853774_36856634_36856888_36857909_36857993_36859076_36859198_36861465_36861564_36862882_36862958_36864465_36864572_36866108_36866296_36867291_36867449_36868140
ENSMUSG00000024812.12_0	chr19	-	4638	23	FSM	ENSMUSG00000024812.12	ENSMUST00000233027.2	4668	23	17	13	17	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTTTAAAAAGACATAAA	NA	NA	NA	NA	NA	NA	NA	NA	24151536	24071881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24151318
ENSMUSG00000024812.12_1	chr19	-	4879	24	FSM	ENSMUSG00000024812.12	ENSMUST00000233658.3	4920	24	23	18	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATTTTTAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	24177991	24071886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24072955_24073947_24074034_24075364_24075680_24076816_24076928_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24171072_24171194_24177648
ENSMUSG00000024812.12_2	chr19	-	3902	21	FSM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAGGAGTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24120206	24072033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142_24116197_24120146
ENSMUSG00000024812.12_4	chr19	-	3836	20	ISM	ENSMUSG00000024812.12	ENST00000649134.1	3915	21	4014	15	4014	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAATAAAAAGGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	24116194	24072037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_24072955_24073947_24074034_24078065_24078279_24079260_24079362_24086008_24086220_24087094_24087175_24088384_24088481_24088789_24088984_24090109_24090321_24091439_24091549_24097308_24097460_24098200_24098268_24099388_24099523_24099626_24099736_24101931_24102086_24103068_24103173_24108218_24108838_24109969_24110073_24112213_24112339_24116142
ENSMUSG00000024816.13_1	chr19	-	4494	11	FSM	ENSMUSG00000024816.13	ENSMUST00000025728.13	4504	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTTAAATTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5925292	5899729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5902771_5906612_5906818_5912278_5912423_5913251_5913376_5915096_5915322_5919464_5919632_5919763_5919823_5920038_5920141_5923196_5923365_5924737_5924823_5925118
ENSMUSG00000024817.14_0	chr19	+	3516	16	FSM	ENSMUSG00000024817.14	ENSMUST00000025739.14	3536	16	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATCAGAAAATGACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30007924	30071114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_30008332_30016463_30016698_30033634_30033895_30048642_30048862_30051293_30051404_30052483_30052671_30055413_30055538_30055939_30056048_30057238_30057344_30060133_30060241_30063645_30063809_30064575_30064717_30065878_30065976_30066585_30066744_30069440_30069540_30070117
ENSMUSG00000024818.16_0	chr19	+	2465	6	FSM	ENSMUSG00000024818.16	ENSMUST00000025732.14	2480	6	9	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTACTGATGATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	5927853	5935788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5930467_5930654_5934372_5934632_5934750
ENSMUSG00000024818.16_2	chr19	+	971	5	FSM	ENSMUSG00000024818.16	ENST00000534028.5	989	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCTGGCCAGGCGATA	NA	NA	NA	NA	NA	NA	NA	NA	5928502	5935015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5928720_5929876_5929921_5930467_5930654_5934372_5934632_5934750
ENSMUSG00000024818.16_3	chr19	+	677	5	FSM	ENSMUSG00000024818.16	ENST00000526432.5	684	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCTGGCCAGGCGATA	NA	NA	NA	NA	NA	NA	NA	NA	5928682	5935015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5928720_5929876_5929921_5930112_5930185_5934372_5934632_5934750
ENSMUSG00000024818.16_6	chr19	+	636	4	ISM	ENSMUSG00000024818.16	ENST00000526432.5	684	5	1197	8	1197	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGCCTGGCCAGGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	5929879	5935014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_5929921_5930112_5930185_5934372_5934632_5934750
ENSMUSG00000024818.16_7	chr19	+	597	3	ISM	ENSMUSG00000024818.16	ENST00000526432.5	684	5	1429	7	1429	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGCCTGGCCAGGCGATA	NA	NA	NA	NA	NA	NA	NA	NA	5930111	5935015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_5930185_5934372_5934632_5934750
ENSMUSG00000024824.8_0	chr19	-	2058	11	FSM	ENSMUSG00000024824.8	ENSMUST00000025740.8	2081	11	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACACTTAACGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4251624	4245206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4246082_4246179_4246382_4247111_4247250_4247337_4247403_4247475_4247586_4247669_4247780_4250270_4250371_4250463_4250579_4250927_4251057_4251327_4251399_4251481
ENSMUSG00000024826.16_0	chr19	-	3302	11	FSM	ENSMUSG00000024826.16	ENSMUST00000136983.8	3314	11	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTATGAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	5962891	5946547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024826.16_6	chr19	-	2400	12	FSM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCTTCTGCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	5962820	5947420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028_5957190_5962768
ENSMUSG00000024826.16_8	chr19	-	2343	11	ISM	ENSMUSG00000024826.16	ENSMUST00000118623.2	2406	12	5636	6	5636	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTCTTCTGCTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	5957184	5947420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5948660_5951244_5951327_5952131_5952245_5952390_5952520_5952658_5952797_5953758_5953801_5954267_5954347_5954481_5954575_5955416_5955581_5956551_5956660_5957028
ENSMUSG00000024827.11_0	chr19	-	3753	25	FSM	ENSMUSG00000024827.11	ENSMUST00000025778.9	3767	25	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATGCGAATTTCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	30152820	30075851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30080378_30080475_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121_30102198_30109071_30109215_30110879_30110922_30111094_30111180_30111589_30111688_30113903_30113985_30114492_30114633_30116674_30116781_30120759_30120857_30122546_30122744_30123017_30123166_30124568_30124647_30128821_30128987_30135913_30136050_30151823_30151903_30152390
ENSMUSG00000024827.11_3	chr19	-	1562	9	FSM	ENSMUSG00000024827.11	ENST00000639318.1	1568	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTCACAGCATAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30102214	30075938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_30076511_30077236_30077318_30078142_30078316_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942_30096069_30102121
ENSMUSG00000024827.11_4	chr19	-	1475	8	ISM	ENSMUSG00000024827.11	ENST00000639318.1	1568	9	6146	0	6146	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCATAAGTGTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30096068	30075932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_30076511_30077236_30077318_30078142_30078316_30088072_30088185_30091121_30091264_30092587_30092701_30093798_30093949_30095942
ENSMUSG00000024829.13_0	chr19	+	1123	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025745.10	1138	7	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAACAATGTGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3332913	3342835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3342435
ENSMUSG00000024829.13_1	chr19	+	784	7	FSM	ENSMUSG00000024829.13	ENSMUST00000025743.7	802	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGAGCCTGTGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	3333070	3341194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3333172_3334759_3334818_3335309_3335396_3336874_3337039_3337702_3337756_3338983_3339088_3340976
ENSMUSG00000024830.18_0	chr19	-	4569	15	FSM	ENSMUSG00000024830.18	ENSMUST00000025749.15	4586	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCATCTCTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4213343	4203996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4207199_4207480_4207594_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUSG00000024830.18_7	chr19	-	1405	14	FSM	ENSMUSG00000024830.18	ENSMUST00000118483.2	1409	14	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGAACCCGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	4213283	4206987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4207199_4207680_4207789_4207877_4207956_4208064_4208128_4208608_4208717_4208827_4208919_4209001_4209093_4209225_4209327_4209401_4209460_4211066_4211215_4212258_4212328_4212601_4212723_4212820_4212862_4213166
ENSMUSG00000024831.15_0	chr19	-	5556	15	FSM	ENSMUSG00000024831.15	ENSMUST00000025751.11	5569	15	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATTTTAATAGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	3333011	3309082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3311636_3311974_3312145_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ENSMUSG00000024831.15_1	chr19	-	3493	14	FSM	ENSMUSG00000024831.15	ENSMUST00000119292.8	3513	14	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACAGTGGATATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	3332971	3310935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3311636_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ENSMUSG00000024831.15_2	chr19	-	2966	15	FSM	ENSMUSG00000024831.15	ENST00000255078.8	2977	15	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAAGCCACACCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	3332782	3311437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3311636_3311974_3312139_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418_3331589_3332700
ENSMUSG00000024831.15_3	chr19	-	2883	14	ISM	ENSMUSG00000024831.15	ENST00000255078.8	2977	15	1200	6	1200	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAAGCCACACCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	3331587	3311437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_3311636_3311974_3312139_3314810_3315666_3316335_3316460_3317241_3317337_3318297_3318417_3318659_3318843_3321525_3321701_3322887_3323036_3324355_3324557_3326755_3326920_3329532_3329631_3329806_3329997_3331418
ENSMUSG00000024833.16_0	chr19	-	2403	18	FSM	ENSMUSG00000024833.16	ENSMUST00000025752.15	2421	18	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGATTTTAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	6014220	5990577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5991046_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUSG00000024833.16_3	chr19	-	2370	18	FSM	ENSMUSG00000024833.16	ENSMUST00000165143.3	2391	18	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6014223	5991148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5991581_5992023_5992151_5992377_5992438_5993250_5993358_5993582_5993692_5996497_5996572_5997731_5997771_5998429_5998555_6000473_6000517_6001169_6001233_6001658_6001815_6003092_6003182_6003718_6003913_6006035_6006143_6008845_6008904_6009060_6009153_6011118_6011244_6013853
ENSMUSG00000024835.16_0	chr19	+	1871	11	FSM	ENSMUSG00000024835.16	ENSMUST00000008893.9	1888	11	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	6379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCAGGTTTGACCTACT	NA	NA	NA	NA	NA	NA	NA	NA	4198627	4204027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4198736_4199340_4199544_4199861_4199985_4200088_4200219_4200438_4200621_4200705_4200826_4201393_4201499_4201578_4201725_4202520_4202579_4203225_4203490_4203595
ENSMUSG00000024841.9_0	chr19	+	2549	6	FSM	ENSMUSG00000024841.9	ENSMUST00000025759.9	2556	6	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTATGAAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	5416775	5421554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5417239_5418085_5418305_5418449_5418559_5418644_5418754_5418922_5418971_5419953
ENSMUSG00000024843.16_0	chr19	+	2540	11	FSM	ENSMUSG00000024843.16	ENSMUST00000072055.13	2549	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGACTGTTACCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	3901804	3944368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3902414_3914647_3914760_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ENSMUSG00000024843.16_4	chr19	+	2304	12	FSM	ENSMUSG00000024843.16	ENSMUST00000025760.13	2319	12	1	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAACTTGAAACCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	3902076	3944350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3902414_3914647_3914760_3925734_3925789_3934471_3934586_3935859_3935994_3936361_3936467_3937388_3937448_3939022_3939111_3939879_3939989_3942106_3942214_3942709_3942792_3943347
ENSMUSG00000024844.16_0	chr19	-	1248	3	FSM	ENSMUSG00000024844.16	ENSMUST00000025762.16	1261	3	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	5417186	5414668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5415187_5415845_5415985_5416595
ENSMUSG00000024844.16_3	chr19	-	750	3	FSM	ENSMUSG00000024844.16	ENSMUST00000170010.3	758	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGGTGTTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	5416383	5414668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5415187_5415845_5415985_5416290
ENSMUSG00000024845.20_0	chr19	+	1441	6	FSM	ENSMUSG00000024845.20	ENSMUST00000150627.11	1472	6	0	31	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAATAAACAAAACCG	NA	NA	NA	NA	NA	NA	NA	NA	4175959	4182275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181227_4181282_4181360
ENSMUSG00000024845.20_10	chr19	+	786	5	FSM	ENSMUSG00000024845.20	ENSMUST00000151401.11	800	5	8	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCCAACAAGGACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4175982	4181720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4181227_4181282_4181360
ENSMUSG00000024845.20_5	chr19	+	923	7	FSM	ENSMUSG00000024845.20	ENSMUST00000140267.10	938	7	9	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCCAACAAGGACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	4175967	4181720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4176200_4177055_4177121_4177548_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUSG00000024845.20_9	chr19	+	1470	7	FSM	ENSMUSG00000024845.20	ENSMUST00000139987.10	1488	7	9	9	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCTTTAAGGAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	4175968	4182295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4176200_4177055_4177121_4177575_4177639_4177758_4177836_4181029_4181075_4181227_4181282_4181360
ENSMUSG00000024846.7_0	chr19	-	3936	3	FSM	ENSMUSG00000024846.7	ENSMUST00000025764.6	3951	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTATCCATTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	5399593	5394738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5398078_5398424_5398551_5399122
ENSMUSG00000024847.16_0	chr19	-	1357	7	FSM	ENSMUSG00000024847.16	ENSMUST00000117831.8	1378	7	13	8	13	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTAATCTATCTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4175845	4164453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335_4171546_4175729
ENSMUSG00000024847.16_13	chr19	-	1183	6	FSM	ENSMUSG00000024847.16	ENST00000684006.1	1200	6	11	6	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCTGGCTTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4171514	4164469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164786_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024847.16_21	chr19	-	1033	5	FSM	ENSMUSG00000024847.16	ENST00000528641.7	1048	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCTGGCTTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4171542	4164469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4168086_4168267_4171335
ENSMUSG00000024847.16_4	chr19	-	1247	6	FSM	ENSMUSG00000024847.16	ENSMUST00000025767.14	1261	6	8	6	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTCTGGCTTTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	4171567	4164469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024847.16_6	chr19	-	1026	5	FSM	ENSMUSG00000024847.16	ENST00000684657.1	1033	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGCAGAACTAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	4171518	4164461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164797_4165080_4165223_4165319_4165497_4165981_4166171_4171335
ENSMUSG00000024847.16_9	chr19	-	1191	6	FSM	ENSMUSG00000024847.16	ENST00000683237.1	1204	6	9	4	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTGGCTTTGCAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	4171516	4164466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4164797_4165088_4165223_4165319_4165497_4165981_4166171_4168086_4168267_4171335
ENSMUSG00000024851.15_0	chr19	+	4190	24	FSM	ENSMUSG00000024851.15	ENSMUST00000049658.14	4206	24	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTACTGTGGGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4150007	4163959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4150214_4151143_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
ENSMUSG00000024851.15_13	chr19	+	4493	23	FSM	ENSMUSG00000024851.15	ENSMUST00000100022.4	4512	23	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTACTGTGGGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4150634	4163959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4151263_4152672_4152888_4152974_4153097_4153260_4153486_4154813_4155141_4155229_4155326_4155414_4155523_4156563_4156626_4156711_4156963_4157785_4157976_4158085_4158194_4158422_4158581_4158664_4158868_4159825_4159997_4160494_4160660_4160841_4160991_4161078_4161190_4161581_4161699_4161865_4162015_4162100_4162251_4162326_4162511_4162747_4162877_4163484
ENSMUSG00000024853.11_0	chr19	-	3210	21	FSM	ENSMUSG00000024853.11	ENSMUST00000025774.11	3222	21	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	2969	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACTGGCTAACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	5345474	5323962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5324556_5324819_5325006_5325091_5325192_5329296_5329399_5329497_5329641_5329869_5329978_5333670_5333779_5333885_5333976_5334602_5334753_5336216_5336445_5336604_5336686_5336838_5336977_5337096_5337313_5337562_5337655_5337937_5338035_5338331_5338442_5341332_5341451_5343107_5343348_5344326_5344405_5345068_5345116_5345289
ENSMUSG00000024854.5_0	chr19	+	904	4	FSM	ENSMUSG00000024854.5	ENSMUST00000025773.5	913	4	6	3	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCTGACCTTACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	4281958	4283685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4282243_4282516_4282607_4282801_4282914_4283267
ENSMUSG00000024855.11_0	chr19	-	4858	24	FSM	ENSMUSG00000024855.11	ENSMUST00000025786.9	4869	24	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAAACTTGTTATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	5323139	5183188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5185054_5185147_5185268_5186720_5186948_5188957_5189094_5189307_5189351_5191187_5191231_5191634_5191738_5192271_5192383_5192543_5192699_5193378_5193486_5193802_5193908_5194827_5194964_5195098_5195215_5197154_5197236_5202301_5202396_5202687_5202849_5203691_5203752_5205716_5205798_5205883_5205976_5206384_5206530_5209995_5210122_5210745_5210836_5217951_5218040_5322566
ENSMUSG00000024856.11_0	chr19	+	1071	4	FSM	ENSMUSG00000024856.11	ENSMUST00000025779.11	1080	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTTTCTGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4147190	4149017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4147508_4147816_4147918_4148004_4148138_4148497
ENSMUSG00000024857.17_0	chr19	+	525	5	FSM	ENSMUSG00000024857.17	ENST00000353903.9	535	5	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGACCGGCCTGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	4133555	4137153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4133645_4135558_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024857.17_8	chr19	+	438	4	ISM	ENSMUSG00000024857.17	ENST00000353903.9	535	5	2009	2	2009	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGACCGGCCTGGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	4135556	4137153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4135694_4136217_4136328_4136447_4136596_4137110
ENSMUSG00000024858.15_0	chr19	-	3167	22	FSM	ENSMUSG00000024858.15	ENSMUST00000025791.12	3182	22	14	1	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4355969	4336029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355149_4355222_4355929
ENSMUSG00000024858.15_2	chr19	-	3353	21	FSM	ENSMUSG00000024858.15	ENSMUST00000088737.11	3376	21	23	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCTCGCTGTCTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	4356227	4336029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4337293_4337380_4337495_4337585_4337723_4337850_4338014_4338439_4338536_4338619_4338687_4339340_4339442_4339700_4339768_4339925_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024858.15_8	chr19	-	1428	14	FSM	ENSMUSG00000024858.15	ENST00000526285.1	1439	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAAAAAATGGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4356231	4336048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4336193_4339990_4340034_4340101_4340197_4340422_4340554_4340631_4340711_4340799_4340900_4341266_4341359_4341617_4341670_4342197_4342260_4342389_4342465_4342571_4342674_4342794_4342869_4344877_4344955_4355929
ENSMUSG00000024862.17_0	chr19	-	2648	15	FSM	ENSMUSG00000024862.17	ENST00000421552.5	2667	15	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAACCGGGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5168368	5157781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5167221_5167461_5168211
ENSMUSG00000024862.17_1	chr19	-	2881	16	FSM	ENSMUSG00000024862.17	ENST00000394067.7	2899	16	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAACCGGGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5168370	5157781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5158717_5159130_5159189_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968_5164200_5167221_5167461_5168211
ENSMUSG00000024862.17_2	chr19	-	2404	13	FSM	ENSMUSG00000024862.17	ENST00000394065.2	2419	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAACCGGGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5164204	5157781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5158691_5159328_5159454_5159520_5159671_5159760_5159870_5160224_5160293_5160394_5160445_5161165_5161266_5161392_5161567_5161646_5161749_5161853_5161942_5162745_5162969_5163808_5163879_5163968
ENSMUSG00000024866.11_0	chr19	+	1282	8	FSM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGACAGTTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4036569	4040003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4036612_4036822_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ENSMUSG00000024866.11_1	chr19	+	1240	7	ISM	ENSMUSG00000024866.11	ENSMUST00000236510.2	1284	8	253	2	162	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGACAGTTCTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	4036822	4040003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4036952_4037050_4037306_4037730_4037924_4038137_4038232_4038397_4038506_4038605_4038716_4039652
ENSMUSG00000024869.11_0	chr19	+	773	4	FSM	ENSMUSG00000110949.2	ENSMUST00000025802.10	787	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCTCCTCTGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	4050586	4052096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795
ENSMUSG00000024869.11_1	chr19	+	3853	9	FSM	ENSMUSG00000024869.11	ENSMUST00000155405.8	3904	9	14	37	14	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGACAGAATAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	4050639	4055779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4050848_4051195_4051329_4051627_4051706_4051795_4053815_4053944_4054025_4054095_4054168_4054322_4054433_4054512_4054649_4054762
ENSMUSG00000024870.7_0	chr19	-	1896	6	FSM	ENSMUSG00000024870.7	ENSMUST00000025804.7	1913	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAGCGGTGGTGACTGA	NA	NA	NA	NA	NA	NA	NA	NA	5157089	5149238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5150601_5150694_5150827_5154668_5154765_5154860_5154957_5155205_5155279_5156952
ENSMUSG00000024871.12_0	chr19	+	1092	10	FSM	ENSMUSG00000024871.12	ENST00000514950.1	1104	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTGCCCCCCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	4053610	4056820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4053815_4053944_4054025_4054095_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056112_4056268_4056357_4056440_4056551_4056649_4056718
ENSMUSG00000024871.12_1	chr19	+	1089	10	ISM	ENSMUSG00000024871.12	ENSMUST00000025806.5	1469	11	304	185	13	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCGTGCCCCCCCAACTT	NA	NA	NA	NA	NA	NA	NA	NA	4053616	4056820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4053815_4053944_4054025_4054095_4054168_4054322_4054433_4054512_4054649_4054762_4054817_4056109_4056268_4056357_4056440_4056551_4056649_4056718
ENSMUSG00000024875.6_0	chr19	+	1007	7	FSM	ENSMUSG00000024875.6	ENSMUST00000238093.2	1018	7	9	2	-6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCTTGACCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5138581	5142531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142329
ENSMUSG00000024875.6_1	chr19	+	1475	8	FSM	ENSMUSG00000024875.6	ENSMUST00000025811.6	1488	8	11	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTTTATTCATATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5138583	5142907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5138777_5139446_5139659_5139799_5139905_5140031_5140111_5141395_5141454_5141568_5141725_5142156_5142251_5142329
ENSMUSG00000024878.10_0	chr19	-	1912	15	FSM	ENSMUSG00000024878.10	ENSMUST00000025815.10	1929	15	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCAGTAATAGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24938956	24897287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_1	chr19	-	998	13	FSM	ENSMUSG00000024878.10	ENST00000613508.4	1007	13	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGGAAGAACTGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24938843	24897944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_2	chr19	-	1115	14	FSM	ENSMUSG00000024878.10	ENST00000382447.8	1094	14	-22	1	-22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGGAAGAACTGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24938873	24897944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24915759_24915805_24918112_24918200_24920046_24920094_24925432_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_32	chr19	-	1011	12	FSM	ENSMUSG00000024878.10	ENST00000377392.9	1028	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCAGGCAGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	24938889	24897995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900164_24918112_24918200_24920046_24920094_24925382_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024878.10_4	chr19	-	1191	15	FSM	ENSMUSG00000024878.10	ENST00000433343.6	1201	15	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCGGAAGAACTGACGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24938842	24897944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24898067_24898384_24898515_24899960_24900027_24900119_24900189_24905690_24905740_24909027_24909085_24915759_24915805_24918112_24918200_24920046_24920094_24925382_24925471_24926565_24926626_24930623_24930716_24932699_24932797_24935267_24935355_24938747
ENSMUSG00000024883.9_0	chr19	+	1875	9	FSM	ENSMUSG00000024883.9	ENST00000530056.1	1889	9	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGAAAAGGCAAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	5100421	5105079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5100606_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5103180_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_1	chr19	+	4480	10	FSM	ENSMUSG00000024883.9	ENSMUST00000225427.2	4503	10	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTGAAGCTTGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	5100526	5107094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101801_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024883.9_3	chr19	+	4168	10	FSM	ENSMUSG00000024883.9	ENSMUST00000025818.8	4184	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGACTGAAGCTTGATAAC	NA	NA	NA	NA	NA	NA	NA	NA	5100871	5107094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5100970_5101101_5101283_5101381_5101497_5101585_5101659_5101768_5101861_5102003_5102745_5102997_5103304_5103626_5103759_5103883_5104036_5104816
ENSMUSG00000024885.10_0	chr19	-	1907	10	FSM	ENSMUSG00000024885.10	ENSMUST00000051803.8	1924	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAAGCTACAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	3979798	3963497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3964085_3965293_3965394_3968041_3968209_3968602_3968990_3970796_3970879_3971182_3971269_3971472_3971594_3971696_3971808_3973738_3973902_3979695
ENSMUSG00000024887.11_0	chr19	-	1997	19	FSM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAAAGTTGACAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	32035256	31964159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_31964348_31969401_31969491_31972741_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484_32023662_32030232_32030383_32031879_32031941_32035196
ENSMUSG00000024887.11_1	chr19	-	1934	18	ISM	ENSMUSG00000024887.11	ENST00000329428.10	2004	19	3321	5	3321	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAAAGTTGACAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	32031937	31964159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_31964348_31969401_31969491_31972741_31972802_31981083_31981231_31983657_31983754_31985979_31986076_31986805_31986846_31989825_31989921_31991601_31991718_31993884_31993967_31996341_31996429_31999653_31999780_32002200_32002322_32020880_32020959_32022289_32022418_32023484_32023662_32030232_32030383_32031879
ENSMUSG00000024889.6_0	chr19	-	1349	7	FSM	ENSMUSG00000024889.6	ENST00000524506.5	1362	7	9	4	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4675655	4672622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4673271_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUSG00000024889.6_1	chr19	-	1242	7	FSM	ENSMUSG00000024889.6	ENSMUST00000224707.2	1255	7	9	4	-5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4675352	4672622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675121_4675220
ENSMUSG00000024889.6_2	chr19	-	1416	8	FSM	ENSMUSG00000024889.6	ENSMUST00000025823.6	1425	8	9	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTTGGAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4675659	4672622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4673271_4673528_4673592_4673853_4673926_4674041_4674210_4674712_4674792_4675040_4675125_4675220_4675324_4675460
ENSMUSG00000024891.7_0	chr19	+	2592	12	FSM	ENSMUSG00000024891.7	ENSMUST00000236152.2	2619	12	19	8	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACGGATTCCTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	5073906	5081992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5074306_5074538_5074621_5076055_5076217_5076385_5076526_5077052_5077188_5077370_5077469_5077707_5077793_5078868_5079000_5079239_5079349_5079436_5079523_5080315_5080519_5081029
ENSMUSG00000024892.18_0	chr19	+	4055	21	FSM	ENSMUSG00000024892.18	ENSMUST00000224726.3	4061	21	3	3	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4560516	4671704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4560610_4565681_4565719_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024892.18_10	chr19	+	3926	19	ISM	ENSMUSG00000024892.18	ENSMUST00000113825.4	4044	20	7253	22	-121	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4651626	4671704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024892.18_11	chr19	+	1466	10	FSM	ENSMUSG00000024892.18	ENST00000628663.1	1473	10	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATAAATAGAAACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4651747	4661832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4661614
ENSMUSG00000024892.18_12	chr19	+	1436	9	ISM	ENSMUSG00000024892.18	ENST00000628663.1	1473	10	159	7	159	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATAAATAGAAACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	4651906	4661832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4661614
ENSMUSG00000024892.18_3	chr19	+	4021	20	FSM	ENSMUSG00000024892.18	ENST00000393958.7	4029	20	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAGGTCATGTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4560550	4671704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4560647_4651627_4651764_4651892_4652078_4652237_4652404_4652501_4652648_4652785_4652904_4653087_4653240_4654492_4654612_4657559_4657723_4659891_4660075_4667607_4667753_4667992_4668083_4668169_4668549_4668985_4669227_4669347_4669598_4669807_4670053_4670141_4670322_4670394_4670644_4670847_4670989_4671067
ENSMUSG00000024896.10_0	chr19	+	2593	5	FSM	ENSMUSG00000024896.10	ENSMUST00000025827.10	2613	5	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGTCATCTCTGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	32463180	32492756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_32463960_32468737_32468936_32471270_32471369_32475783_32475918_32491372
ENSMUSG00000024899.8_0	chr19	+	2015	12	FSM	ENSMUSG00000024899.8	ENSMUST00000235594.2	2047	12	28	4	28	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCATAATTTAAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	32573217	32643106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_32573276_32611285_32611401_32614433_32614670_32615653_32615793_32616318_32616438_32616617_32616732_32618699_32618812_32629295_32629502_32637978_32638115_32640454_32640724_32641820_32642051_32642825
ENSMUSG00000024899.8_1	chr19	+	1955	11	ISM	ENSMUSG00000024899.8	ENSMUST00000236290.2	3618	12	13883	1479	13883	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCATAATTTAAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	32611287	32643106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_32611401_32614433_32614670_32615653_32615793_32616318_32616438_32616617_32616732_32618699_32618812_32629295_32629502_32637978_32638115_32640454_32640724_32641820_32642051_32642825
ENSMUSG00000024900.6_0	chr19	+	4307	19	FSM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	6	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATCATCTGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3373290	3435729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3373375_3399188_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ENSMUSG00000024900.6_5	chr19	+	4224	18	ISM	ENSMUSG00000024900.6	ENSMUST00000025835.6	4317	19	25903	4	25903	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATCATCTGTCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3399187	3435729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_3399343_3402484_3402625_3406316_3406489_3408175_3408278_3412084_3412223_3414477_3414556_3415674_3415783_3416329_3416418_3418854_3419051_3420706_3420896_3421571_3421678_3425092_3425210_3426410_3426576_3428367_3428503_3430016_3430170_3431609_3431724_3431931_3432025_3433754
ENSMUSG00000024901.16_3	chr19	-	1694	5	FSM	ENSMUSG00000024901.16	ENST00000618547.4	1712	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGTAAGTAACAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	4991930	4981843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4982896_4984394_4984584_4984930_4985126_4986145_4986269_4991795
ENSMUSG00000024902.6_0	chr19	+	3030	5	FSM	ENSMUSG00000024902.6	ENSMUST00000025836.6	3045	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCTATTATATATAGGT	NA	NA	NA	NA	NA	NA	NA	NA	5012183	5017021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013694_5014701
ENSMUSG00000024902.6_5	chr19	+	802	5	FSM	ENSMUSG00000024902.6	ENSMUST00000236917.2	813	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAACTCTCAGCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5012385	5014971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5012544_5012906_5013003_5013353_5013448_5013533_5013718_5014701
ENSMUSG00000024906.11_0	chr19	-	2050	16	FSM	ENSMUSG00000024906.11	ENSMUST00000124334.8	2067	16	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCAATGCCAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	5538423	5532869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5533058_5533135_5533220_5533482_5533587_5533662_5533792_5533957_5534054_5534140_5534258_5534886_5534985_5535066_5535189_5535285_5535382_5535515_5535654_5536056_5536143_5536307_5536377_5536514_5536617_5537052_5537136_5537789_5537920_5538015
ENSMUSG00000024908.16_24	chr19	-	2939	19	FSM	ENSMUSG00000024908.16	ENST00000534534.5	2950	19	5	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACATGGCTGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	3625715	3506255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3568244_3568383_3571733_3571921_3594107_3594256_3625640
ENSMUSG00000024908.16_5	chr19	-	4942	24	FSM	ENSMUSG00000024908.16	ENSMUST00000113997.9	4952	24	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTCCTCGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	3625739	3504932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3507052_3509360_3509481_3514544_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107_3594256_3625640
ENSMUSG00000024908.16_9	chr19	-	4459	23	FSM	ENSMUSG00000024908.16	ENST00000393801.7	4474	23	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACATTGCTGGCGGAT	NA	NA	NA	NA	NA	NA	NA	NA	3594236	3505322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3507052_3509360_3509481_3514519_3514696_3516492_3516600_3517140_3517295_3519640_3519763_3520970_3521102_3521978_3522034_3523768_3523867_3528277_3528365_3534830_3534917_3536975_3537092_3540773_3540839_3542365_3542516_3543885_3544039_3546521_3546652_3557241_3557356_3561928_3562042_3564653_3564720_3568244_3568383_3571733_3571921_3576701_3576935_3594107
ENSMUSG00000024909.16_0	chr19	+	2613	11	FSM	ENSMUSG00000024909.16	ENSMUST00000166303.9	2634	11	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTTTAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5523998	5532541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5524482_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_15	chr19	+	1741	10	FSM	ENSMUSG00000024909.16	ENSMUST00000070118.14	1781	10	29	11	29	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAAGGAGTCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5524806	5531870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_2	chr19	+	2205	11	FSM	ENSMUSG00000024909.16	ENSMUST00000235523.2	2215	11	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTTTAGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5524348	5532541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5524424_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_5	chr19	+	1538	11	FSM	ENSMUSG00000024909.16	ENSMUST00000165485.8	1557	11	8	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAAGGAGTCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	5524723	5531870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5524803_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024909.16_8	chr19	+	1453	11	FSM	ENSMUSG00000024909.16	ENST00000307998.11	1467	11	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCCTCAGGGAAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5524734	5531749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5524850_5525088_5525207_5525435_5525485_5526093_5526301_5527589_5527713_5527954_5528072_5528228_5528349_5530057_5530178_5530261_5530389_5530573_5530770_5531588
ENSMUSG00000024910.6_1	chr19	-	739	6	FSM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGTGAGCGAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5517150	5515562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5515759_5515832_5515898_5516047_5516174_5516416_5516514_5516608_5516764_5517050
ENSMUSG00000024910.6_2	chr19	-	642	5	ISM	ENSMUSG00000024910.6	ENST00000526034.2	753	6	392	6	392	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGTGAGCGAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5516766	5515562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5515759_5515832_5515898_5516047_5516174_5516416_5516514_5516608
ENSMUSG00000024910.6_4	chr19	-	766	7	FSM	ENSMUSG00000024910.6	ENST00000680670.1	783	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGTGAGCGAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5517147	5515562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5515704_5515828_5515898_5516047_5516174_5516258_5516340_5516416_5516514_5516608_5516764_5517050
ENSMUSG00000024911.8_0	chr19	+	1197	10	FSM	ENSMUSG00000024911.8	ENSMUST00000225141.2	1209	10	12	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGTCCTTGTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5510655	5515079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513333_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUSG00000024911.8_6	chr19	+	1199	10	FSM	ENSMUSG00000024911.8	ENSMUST00000025847.7	1215	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTGGAGACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	5510664	5515069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5510807_5510988_5511188_5511417_5511545_5512559_5512661_5513198_5513354_5513631_5513741_5513814_5513879_5514156_5514244_5514361_5514460_5514952
ENSMUSG00000024912.7_0	chr19	+	1847	4	FSM	ENSMUSG00000024912.7	ENSMUST00000025850.7	1864	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTAGTCTGGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5497583	5505966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5498084_5500187_5500380_5504440_5504549_5504919
ENSMUSG00000024912.7_3	chr19	+	1168	3	FSM	ENSMUSG00000024912.7	ENST00000531493.5	1180	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAGCCTAGAACACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	5497908	5505720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5498084_5500187_5500380_5504919
ENSMUSG00000024912.7_4	chr19	+	1100	4	FSM	ENSMUSG00000024912.7	ENST00000532401.1	1123	4	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATTAGAGGAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	5497907	5505548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5498084_5500187_5500380_5504445_5504549_5504919
ENSMUSG00000024914.17_0	chr19	-	956	7	FSM	ENSMUSG00000024914.17	ENSMUST00000025853.16	992	7	12	24	12	8	multi-exon	TRUE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTATTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5474995	5472862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUSG00000024914.17_4	chr19	-	903	7	FSM	ENSMUSG00000024914.17	ENSMUST00000113674.8	939	7	28	8	28	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTATTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5474921	5472862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5473054_5473358_5473448_5473587_5473703_5473799_5473920_5474209_5474304_5474388_5474462_5474700
ENSMUSG00000024914.17_9	chr19	-	713	6	FSM	ENSMUSG00000024914.17	ENSMUST00000136579.3	734	6	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTGGGATTGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	5474531	5472880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5473054_5473358_5473448_5473587_5473682_5473799_5473920_5474209_5474304_5474388
ENSMUSG00000024921.18_0	chr19	+	5695	33	FSM	ENSMUSG00000024921.18	ENSMUST00000176769.9	5703	33	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCAAGAATGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26582449	26755667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659340_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024921.18_1	chr19	+	5918	33	FSM	ENSMUSG00000024921.18	ENSMUST00000025862.15	5921	33	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26582453	26755720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_26582634_26597083_26597345_26601280_26601411_26608069_26608532_26617787_26618050_26624420_26624548_26626383_26626558_26628948_26629123_26631740_26631912_26641450_26641505_26646152_26646284_26646513_26646572_26648483_26648585_26650098_26650247_26654033_26654198_26655715_26655783_26656473_26656585_26659270_26659514_26661208_26661323_26668744_26668853_26669580_26669668_26673575_26673623_26675745_26675913_26683467_26683632_26687857_26688086_26693514_26693593_26698128_26698348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024921.18_2	chr19	+	1808	8	FSM	ENSMUSG00000024921.18	ENSMUST00000209085.2	1841	8	24	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCCAAGAATGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26725825	26755666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_26725904_26727251_26727348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024921.18_4	chr19	+	1932	9	FSM	ENSMUSG00000024921.18	ENSMUST00000112637.10	1962	9	23	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGACTCTGTCGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26725825	26755714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_26725945_26727251_26727348_26728521_26728557_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024921.18_5	chr19	+	2331	8	FSM	ENSMUSG00000024921.18	ENSMUST00000207054.2	2333	8	0	2	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCGCCTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26725805	26755720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_26726353_26727251_26727348_26729223_26729442_26748337_26748444_26748907_26749010_26751572_26751706_26753500_26753644_26754734
ENSMUSG00000024924.15_1	chr19	+	3580	18	FSM	ENSMUSG00000024924.15	ENST00000680746.1	3597	18	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTTGGATGGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	27194667	27227274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_27195097_27207595_27207716_27212189_27212313_27215452_27215825_27215909_27216033_27216123_27216247_27217021_27217142_27217244_27217371_27217865_27218038_27218634_27218854_27220464_27220584_27221157_27221298_27221598_27221741_27222934_27223082_27223992_27224077_27224409_27224491_27225256_27225427_27226504
ENSMUSG00000024925.12_0	chr19	+	1118	4	FSM	ENSMUSG00000024925.12	ENSMUST00000025864.11	1126	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTTTGGGAGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	5651908	5653467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5652109_5652220_5652403_5652477_5652598_5652851
ENSMUSG00000024926.11_0	chr19	-	2125	14	FSM	ENSMUSG00000024926.11	ENSMUST00000113641.4	2154	14	20	9	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGCAGAGCTATCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	5660245	5653050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5658829_5658986_5659263_5659401_5659490_5659560_5659879_5659947_5660045
ENSMUSG00000024926.11_1	chr19	-	1889	12	FSM	ENSMUSG00000024926.11	ENSMUST00000235701.2	1905	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGCAGAGCTATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	5660068	5653052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5653581_5653661_5653744_5653857_5654018_5655399_5655494_5655570_5655712_5657578_5657669_5657743_5657993_5658282_5658358_5658665_5658741_5659263_5659401_5659490_5659560_5659879
ENSMUSG00000024927.9_0	chr19	+	2700	11	FSM	ENSMUSG00000024927.9	ENSMUST00000025867.6	2716	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTGGCCAGAGAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	5687520	5698152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5687870_5688459_5688487_5688578_5688731_5688882_5689032_5689886_5689979_5690330_5690463_5691208_5691314_5691491_5691705_5695352_5695434_5695540_5695616_5696827
ENSMUSG00000024935.12_0	chr19	+	3309	12	FSM	ENSMUSG00000024935.12	ENST00000262352.8	3320	12	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTATCTTTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28856433	28891352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28856554_28870234_28870328_28871853_28871969_28873483_28873527_28874906_28875003_28878841_28879027_28880085_28880194_28882011_28882135_28882732_28882928_28886830_28886966_28889053_28890486_28890688
ENSMUSG00000024937.16_0	chr19	-	6386	19	FSM	ENSMUSG00000024937.16	ENSMUST00000049295.15	6404	19	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAAAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5776335	5757411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5767689_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUSG00000024937.16_1	chr19	-	2832	19	FSM	ENSMUSG00000024937.16	ENSMUST00000075606.6	2852	19	9	11	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAACAAACCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5776289	5758087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5770999_5771036_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUSG00000024937.16_2	chr19	-	3136	19	FSM	ENSMUSG00000024937.16	ENSMUST00000236215.2	3160	19	14	10	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAACAAACCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5776284	5758087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770212_5770436_5770591_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUSG00000024937.16_3	chr19	-	2793	18	FSM	ENSMUSG00000024937.16	ENSMUST00000235730.2	2815	18	17	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGAACAAACCAGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	5776286	5758087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5758454_5758583_5758699_5758785_5758860_5760238_5760339_5760601_5760726_5760820_5760877_5760996_5761067_5765823_5766523_5766923_5766973_5767066_5767225_5770713_5770755_5770836_5770906_5771469_5771613_5771694_5771874_5771984_5772039_5772673_5772770_5772977_5773036_5775944
ENSMUSG00000024939.7_0	chr19	-	1173	2	FSM	ENSMUSG00000024939.7	ENSMUST00000116558.3	1189	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTATTGTGATTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5779652	5778121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5778907_5779264
ENSMUSG00000024939.7_1	chr19	-	1143	2	FSM	ENSMUSG00000024939.7	ENSMUST00000161368.2	1160	2	11	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTGTGATTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5779670	5778120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5778858_5779264
ENSMUSG00000024939.7_2	chr19	-	1177	2	FSM	ENSMUSG00000024939.7	ENSMUST00000099955.4	1197	2	14	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTGTGATTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5779665	5778120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5778897_5779264
ENSMUSG00000024940.12_0	chr19	+	5187	28	FSM	ENSMUSG00000024940.12	ENSMUST00000081496.6	5190	28	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGTTGGAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5790934	5808560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5791014_5791362_5792591_5795467_5795798_5795945_5796149_5796326_5796433_5796670_5796764_5796928_5797052_5797440_5797600_5797698_5797885_5798602_5798620_5798693_5798767_5798897_5798997_5800976_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ENSMUSG00000024940.12_17	chr19	+	2192	17	FSM	ENSMUSG00000024940.12	ENST00000532932.5	2202	17	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGCAGCCATAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5800975	5808119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5801103_5801199_5801332_5801426_5801556_5801781_5801905_5802046_5802170_5803660_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ENSMUSG00000024940.12_28	chr19	+	1554	12	FSM	ENSMUSG00000024940.12	ENST00000530785.5	1561	12	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGCAGCCATAGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	5803664	5808119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5803784_5803956_5804077_5805573_5805703_5805959_5806128_5806274_5806359_5806611_5806741_5806821_5806960_5807062_5807204_5807338_5807501_5807574_5807656_5807738_5807871_5807968
ENSMUSG00000024941.10_0	chr19	-	2719	17	FSM	ENSMUSG00000024941.10	ENSMUST00000236978.2	2731	17	12	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGTAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	5821435	5808378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUSG00000024941.10_10	chr19	-	2555	16	FSM	ENSMUSG00000024941.10	ENST00000525364.5	2572	16	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCACATCCTGGGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	5821419	5808462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5808725_5808967_5809175_5809298_5809368_5809692_5809833_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUSG00000024941.10_11	chr19	-	2568	17	FSM	ENSMUSG00000024941.10	ENSMUST00000025890.10	2586	17	10	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCACATCCTGGGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	5821419	5808462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5808725_5808827_5808889_5808967_5809175_5809298_5809371_5809692_5809782_5810008_5810174_5810560_5810637_5810740_5810930_5811680_5811837_5814696_5814811_5815337_5815446_5816185_5816345_5819496_5819653_5819748_5819840_5820230_5820581_5820750_5820892_5821247
ENSMUSG00000024942.20_1	chr19	-	3048	22	FSM	ENSMUSG00000024942.20	ENSMUST00000025891.11	3062	22	8	6	-5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTACATCTGTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6065228	6038578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6039418_6040021_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6046808_6046821_6047720_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ENSMUSG00000024942.20_16	chr19	-	2108	19	FSM	ENSMUSG00000024942.20	ENST00000533129.5	2115	19	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGGTGAGATAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	6064498	6040028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230
ENSMUSG00000024942.20_17	chr19	-	2191	20	FSM	ENSMUSG00000024942.20	ENST00000279247.11	2203	20	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGGTGAGATAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	6065218	6040028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6040081_6040367_6040485_6041568_6041648_6041885_6041955_6042379_6042445_6043903_6043962_6044050_6044117_6044589_6044630_6044708_6044918_6047709_6047897_6057281_6057443_6057529_6057605_6058705_6058792_6059116_6059201_6061044_6061214_6061326_6061461_6063618_6063738_6064025_6064096_6064230_6064499_6065135
ENSMUSG00000024943.10_0	chr19	-	5672	25	FSM	ENSMUSG00000024943.10	ENSMUST00000087556.7	5683	25	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTATAGGTTATTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	23251180	23183823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192008_23192105_23192518_23192564_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUSG00000024943.10_2	chr19	-	3427	24	FSM	ENSMUSG00000024943.10	ENSMUST00000223934.2	3448	24	10	11	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAAGATTGGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23251251	23186097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_23186333_23187614_23187711_23187787_23187968_23191114_23191235_23191429_23191535_23192005_23192105_23195768_23195895_23205537_23205661_23206278_23206403_23208921_23209092_23209182_23209357_23211326_23211460_23213237_23213333_23216248_23216363_23219999_23220155_23221218_23221475_23232040_23232113_23234851_23235014_23237010_23237152_23238696_23238832_23240967_23241131_23243029_23243083_23246090_23246233_23250997
ENSMUSG00000024944.7_0	chr19	-	1271	5	FSM	ENSMUSG00000024944.7	ENSMUST00000025893.7	1286	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGGCTGAGCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6191567	6184416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6184832_6186008_6186090_6187507_6187671_6187759_6187871_6191066
ENSMUSG00000024947.18_0	chr19	+	2647	10	FSM	ENSMUSG00000024947.18	ENSMUST00000113502.10	2652	10	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6385013	6390910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6385101_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUSG00000024947.18_3	chr19	+	2629	10	FSM	ENSMUSG00000024947.18	ENSMUST00000079327.12	2639	10	1	9	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6385043	6390910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6385113_6385474_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUSG00000024947.18_8	chr19	+	2945	9	FSM	ENSMUSG00000024947.18	ENSMUST00000056391.15	2975	9	21	9	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAGAGAGATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	6385089	6390910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6385936_6386754_6386964_6387182_6387312_6387508_6387550_6387630_6387719_6388312_6388450_6388855_6388992_6389368_6389534_6389716
ENSMUSG00000024948.16_0	chr19	+	4626	32	FSM	ENSMUSG00000024948.16	ENSMUST00000025897.13	4644	32	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGAGCTACTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	6391199	6405637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6391376_6391488_6391547_6391773_6391865_6391932_6391998_6392284_6392341_6392639_6392688_6392773_6392817_6393133_6393207_6393284_6393417_6393490_6393554_6393831_6393914_6394001_6394110_6394436_6394516_6394619_6394679_6395348_6395393_6395473_6395513_6395606_6395641_6395757_6395867_6395945_6396035_6396113_6396156_6396238_6396324_6396417_6396498_6396574_6396636_6396721_6396840_6401209_6401269_6401344_6401449_6401526_6401705_6402613_6402683_6402804_6402892_6403149_6403221_6403307_6403364_6403469
ENSMUSG00000024949.18_0	chr19	+	4339	13	FSM	ENSMUSG00000024949.18	ENSMUST00000131252.8	4353	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGGCTCAGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	6413726	6428053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6425687
ENSMUSG00000024949.18_15	chr19	+	2640	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113487.8	2649	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCGGGTCCGTTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6413960	6427226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_26	chr19	+	2803	13	FSM	ENSMUSG00000024949.18	ENST00000377387.5	2813	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6414056	6427233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6414401_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424314_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024949.18_6	chr19	+	2850	13	FSM	ENSMUSG00000024949.18	ENSMUST00000113489.8	2863	13	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTCTTTTCTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	6413761	6427233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6414149_6415693_6415823_6418393_6418470_6421296_6421450_6421647_6421738_6422054_6422239_6422330_6422447_6422547_6422656_6423602_6423784_6424039_6424318_6424578_6424639_6424748_6424929_6426325
ENSMUSG00000024953.18_0	chr19	-	1251	6	FSM	ENSMUSG00000024953.18	ENSMUST00000025904.12	1262	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGGTACAGGGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	6887464	6884074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6884320_6884433_6884496_6884609_6884649_6884909_6885042_6885349_6885485_6886826
ENSMUSG00000024955.16_1	chr19	-	2281	7	FSM	ENSMUSG00000024955.16	ENST00000405666.5	2296	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAAGTACACGGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	6898618	6888354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891446_6891564_6897430_6897768_6898382
ENSMUSG00000024955.16_5	chr19	-	1244	6	FSM	ENSMUSG00000024955.16	ENST00000400596.2	1262	6	11	7	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGAGGCAAGGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6897756	6889125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891465_6891564_6897430
ENSMUSG00000024955.16_8	chr19	-	1532	7	FSM	ENSMUSG00000024955.16	ENST00000418437.1	1547	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTGAGGCAAGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	6898661	6889127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6889379_6889722_6889993_6890083_6890252_6891187_6891317_6891465_6891564_6897430_6897768_6898382
ENSMUSG00000024958.14_4	chr19	-	1342	6	FSM	ENSMUSG00000024958.14	ENST00000377702.8	1355	6	13	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCCCTCCTGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	6918212	6915441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6915898_6916123_6916243_6916379_6916509_6916896_6917123_6917719_6917770_6917850
ENSMUSG00000024958.14_5	chr19	-	1454	7	FSM	ENSMUSG00000024958.14	ENST00000313074.7	1462	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCCCTCCTGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	6918280	6915441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6915792_6916123_6916243_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUSG00000024958.14_6	chr19	-	1378	6	FSM	ENSMUSG00000024958.14	ENST00000539851.5	1385	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCCTCCCTCCTGTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	6918217	6915441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6915898_6916379_6916509_6916628_6916779_6916896_6917123_6917719_6917770_6917850
ENSMUSG00000024959.15_0	chr19	+	1444	4	FSM	ENSMUSG00000024959.15	ENSMUST00000025910.13	1452	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTATCCTTCGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6919236	6929267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6919809_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_4	chr19	+	975	4	FSM	ENSMUSG00000024959.15	ENSMUST00000113423.10	990	4	9	6	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCGCCGCGCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	6919877	6929255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6919993_6920234_6920415_6928007_6928199_6928766
ENSMUSG00000024959.15_8	chr19	+	1520	3	FSM	ENSMUSG00000024959.15	ENSMUST00000237334.2	1533	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCGCCGCGCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	6919900	6929255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6919993_6920234_6920415_6928007
ENSMUSG00000024959.15_9	chr19	+	1151	3	FSM	ENSMUSG00000024959.15	ENSMUST00000235240.2	1169	3	12	6	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCGCCGCGCCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	6919943	6929255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6920415_6928007_6928199_6928766
ENSMUSG00000024960.10_0	chr19	-	4196	32	FSM	ENSMUSG00000024960.10	ENST00000540288.5	4211	32	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAACTGGGTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6947119	6930156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6930526_6931447_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ENSMUSG00000024960.10_3	chr19	-	4241	31	FSM	ENSMUSG00000024960.10	ENSMUST00000025912.10	4257	31	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCCTGTGTACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	6947171	6931085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6931668_6931748_6931836_6932072_6932131_6932208_6932299_6932391_6932469_6932574_6932726_6933081_6933275_6933390_6933427_6933514_6933669_6934994_6935087_6935265_6935371_6935453_6935554_6936163_6936326_6936418_6936574_6937155_6937281_6937500_6937586_6937659_6937757_6939242_6939452_6940060_6940248_6940329_6940415_6940581_6940823_6941740_6941888_6941964_6942132_6942664_6942766_6942876_6942953_6943053_6943108_6943188_6943269_6943510_6943652_6943753_6943823_6943999_6944078_6946914
ENSMUSG00000024962.14_0	chr19	-	1140	7	FSM	ENSMUSG00000024962.14	ENSMUST00000130048.8	1158	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACACTATGGCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6964987	6959848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6960236_6962728_6962864_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUSG00000024962.14_1	chr19	-	1260	7	FSM	ENSMUSG00000024962.14	ENSMUST00000025914.7	1281	7	13	8	-9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACACTATGGCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	6965006	6959848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6960236_6962728_6962965_6963172_6963209_6963388_6963463_6963657_6963855_6964141_6964185_6964719
ENSMUSG00000024963.13_0	chr19	-	825	6	FSM	ENSMUSG00000024963.13	ENSMUST00000179118.2	840	6	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCCTGTCCGATTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	6969632	6965285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6965477_6965556_6965644_6966790_6966953_6967048_6967234_6968085_6968180_6969526
ENSMUSG00000024963.13_1	chr19	-	1061	6	FSM	ENSMUSG00000024963.13	ENSMUST00000025915.13	1074	6	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACGCCTGTCCGATTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	6969865	6965285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6965477_6965556_6965644_6966790_6966956_6967048_6967234_6968085_6968180_6969526
ENSMUSG00000024965.10_0	chr19	-	2583	15	FSM	ENSMUSG00000024965.10	ENSMUST00000040772.9	2587	15	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACTGAGCTTGGGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	6996833	6976325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6976889_6977006_6977149_6979124_6979250_6979580_6979821_6979937_6980045_6980189_6980315_6980398_6980449_6980536_6980672_6980835_6980944_6991215_6991319_6991427_6991597_6991695_6991816_6991984_6992219_6996033_6996208_6996645
ENSMUSG00000024966.10_0	chr19	-	2096	14	FSM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTACGGTCTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	7017329	6998075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863_7013074_7017247
ENSMUSG00000024966.10_2	chr19	-	2015	13	ISM	ENSMUSG00000024966.10	ENSMUST00000025918.9	2108	14	4261	6	4261	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTACGGTCTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	7013074	6998075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_6998540_6999017_6999191_6999394_6999499_6999639_6999677_7002682_7002808_7003659_7003757_7005995_7006117_7006269_7006373_7006475_7006603_7009848_7010018_7011530_7011673_7012014_7012157_7012863
ENSMUSG00000024968.15_0	chr19	+	1993	11	FSM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGAGTCTTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	7247143	7252584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7247187_7247465_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUSG00000024968.15_1	chr19	+	1951	10	ISM	ENSMUSG00000024968.15	ENSMUST00000113369.3	2013	11	336	5	336	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATGAGTCTTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	7247464	7252584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_7247547_7247918_7247972_7248062_7248225_7248334_7248460_7248557_7248628_7248703_7248920_7250464_7250543_7251197_7251256_7251384_7251615_7251707
ENSMUSG00000024969.16_0	chr19	-	4437	19	FSM	ENSMUSG00000024969.16	ENST00000402010.8	4453	19	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGCTGCTGCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	7318978	7252767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7259162_7259325_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUSG00000024969.16_12	chr19	-	4471	18	FSM	ENSMUSG00000024969.16	ENSMUST00000032557.15	4488	18	10	7	-5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGAGCTGCTGCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	7319174	7252767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7254816_7255406_7255452_7257350_7257378_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUSG00000024969.16_25	chr19	-	3055	17	FSM	ENSMUSG00000024969.16	ENSMUST00000164205.8	3104	17	20	29	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCAAAAAAGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7319144	7254126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7254816_7255406_7255452_7258362_7258621_7260090_7260189_7260397_7260571_7260800_7260934_7261829_7261943_7262024_7262125_7262233_7262354_7263096_7263334_7263933_7263991_7264198_7264270_7264365_7264432_7264694_7264744_7267680_7267735_7267967_7268148_7318532
ENSMUSG00000024970.6_0	chr19	-	3130	6	FSM	ENSMUSG00000024970.6	ENSMUST00000025924.4	3152	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCGTGTTGGTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	7360344	7333834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7335853_7351021_7351220_7351386_7351513_7351660_7351811_7351885_7352216_7360036
ENSMUSG00000024972.17_0	chr19	-	1314	8	FSM	ENSMUSG00000024972.17	ENST00000674247.1	1328	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGAGGAGGGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	7584446	7575364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580494_7581333_7581548_7581668_7581758_7584026
ENSMUSG00000024972.17_1	chr19	-	893	7	FSM	ENSMUSG00000024972.17	ENST00000415491.6	906	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGAGGAGGGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	7581756	7575364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7575537_7576124_7576276_7578012_7578122_7579407_7579447_7580373_7580494_7581333_7581548_7581668
ENSMUSG00000024972.17_2	chr19	-	871	7	FSM	ENSMUSG00000024972.17	ENST00000425950.2	886	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGAGGAGGGGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	7581754	7575364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7575537_7576124_7576276_7578012_7578102_7579407_7579447_7580373_7580494_7581333_7581548_7581668
ENSMUSG00000024974.11_0	chr19	+	4837	29	FSM	ENSMUSG00000024974.11	ENSMUST00000025930.10	4851	29	9	5	9	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATGCCTGTGTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	53588837	53634259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53588986_53589913_53589990_53602245_53602285_53603536_53603605_53606499_53606572_53606897_53606978_53607201_53607281_53609019_53609138_53610161_53610338_53611034_53611116_53611482_53611648_53611897_53612020_53613379_53613594_53616281_53616386_53616483_53616584_53617097_53617259_53617674_53617817_53619917_53620069_53622389_53622543_53624101_53624254_53624811_53624971_53627128_53627237_53627757_53627867_53629192_53629441_53629528_53629742_53629955_53630148_53630291_53630470_53632274_53632382_53633137
ENSMUSG00000024975.14_0	chr19	+	2389	12	FSM	ENSMUSG00000024975.14	ENSMUST00000074371.13	2408	12	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTCTTTAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	53880675	53918277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53880888_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ENSMUSG00000024975.14_14	chr19	+	1729	13	FSM	ENSMUSG00000024975.14	ENSMUST00000165617.3	1733	13	3	1	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTTAGTGGGAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	53891849	53918283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513_53917624_53918147
ENSMUSG00000024975.14_8	chr19	+	2375	12	FSM	ENSMUSG00000024975.14	ENSMUST00000025931.14	2381	12	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGAGTGCATTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	53891734	53918290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53891920_53895879_53895987_53897542_53897846_53899358_53899454_53901242_53901357_53908045_53908268_53909648_53909747_53910447_53910563_53914636_53914745_53914965_53915077_53915624_53915765_53917513
ENSMUSG00000024976.15_0	chr19	+	3622	9	FSM	ENSMUSG00000024976.15	ENSMUST00000169861.9	3664	9	28	14	28	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATCAAGATAAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	53932764	54021284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53932834_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUSG00000024976.15_1	chr19	+	3955	9	FSM	ENSMUSG00000024976.15	ENSMUST00000025932.9	3965	9	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTAGAGCTTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53933316	54021558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53933445_53975884_53976815_53991439_53991578_54005979_54006111_54014780_54014970_54016148_54016272_54017899_54018038_54018291_54018410_54019498
ENSMUSG00000024978.12_0	chr19	-	6148	22	FSM	ENSMUSG00000024978.12	ENSMUST00000235957.2	6172	22	8	16	-5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAAAAAACCCGACTG	NA	NA	NA	NA	NA	NA	NA	NA	55115640	55056083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55091397_55091560_55115445
ENSMUSG00000024978.12_1	chr19	-	3810	21	FSM	ENSMUSG00000024978.12	ENSMUST00000061856.6	3832	21	21	1	21	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCTGAACTTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	55087862	55058166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55059479_55061143_55061203_55063002_55063193_55063973_55064112_55064722_55064801_55066257_55066401_55066754_55067020_55067647_55067719_55068815_55068932_55069823_55069910_55070033_55070148_55071632_55071846_55072129_55072230_55075816_55075954_55076542_55076640_55077229_55077377_55079567_55079682_55082350_55082425_55084552_55084676_55085928_55086060_55087760
ENSMUSG00000024981.7_0	chr19	+	4228	22	FSM	ENSMUSG00000024981.7	ENSMUST00000043150.6	4243	22	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCACGTGACTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55241810	55286147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55242599_55257075_55257261_55261200_55261310_55266338_55266404_55266512_55266615_55267895_55267996_55268872_55269052_55269767_55269801_55269881_55269934_55270904_55270979_55271739_55271818_55272834_55272970_55276259_55276395_55277236_55277333_55279577_55279651_55279849_55279939_55280204_55280322_55282018_55282163_55282633_55282736_55283264_55283337_55283804_55283955_55284797
ENSMUSG00000024982.11_0	chr19	-	2058	10	FSM	ENSMUSG00000024982.11	ENST00000683505.1	2077	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCATCAATGAGCCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	55303096	55281432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55282256_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_15	chr19	-	2253	11	FSM	ENSMUSG00000024982.11	ENSMUST00000076891.7	2263	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTATAGTTTTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	55304452	55286751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304111
ENSMUSG00000024982.11_18	chr19	-	1858	10	FSM	ENSMUSG00000024982.11	ENST00000682055.1	1877	10	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTCTGTAAAAATTATAG	NA	NA	NA	NA	NA	NA	NA	NA	55303093	55286760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55299990_55300217_55301620_55301713_55302732
ENSMUSG00000024982.11_9	chr19	-	2158	11	FSM	ENSMUSG00000024982.11	ENSMUST00000224897.2	2168	11	7	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAAGCATTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55304457	55286735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_55287321_55290989_55291037_55291122_55291269_55292128_55292171_55292841_55293010_55297335_55297390_55298174_55298337_55300056_55300217_55301620_55301713_55302732_55303205_55304227
ENSMUSG00000024983.11_0	chr19	+	1233	8	FSM	ENSMUSG00000024983.11	ENSMUST00000225529.2	1244	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCGGCCCCTTTCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	55304737	55565433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55564905
ENSMUSG00000024983.11_1	chr19	+	4153	9	FSM	ENSMUSG00000024983.11	ENSMUST00000223690.2	4175	9	13	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCTAATGATTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55304794	55615732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55375620_55375642_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ENSMUSG00000024983.11_2	chr19	+	3393	8	FSM	ENSMUSG00000024983.11	ENSMUST00000095950.3	3405	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAGAGTTTTAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55304792	55614991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55304977_55310370_55310430_55316777_55316889_55369373_55369452_55380215_55380301_55486942_55487014_55487674_55487737_55612248
ENSMUSG00000024985.21_10	chr19	+	4101	14	FSM	ENSMUSG00000024985.21	ENST00000538897.5	4114	14	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGGCTGGCCGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	55730262	55922086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55919865
ENSMUSG00000024985.21_23	chr19	+	1983	13	FSM	ENSMUSG00000024985.21	ENST00000355717.9	2000	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATAGCTCCGCCTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	55730597	55920282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55851852_55851994_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ENSMUSG00000024985.21_4	chr19	+	3551	12	FSM	ENSMUSG00000024985.21	ENSMUST00000041717.14	3590	12	11	28	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGAAAAAGAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55730262	55921656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55919865
ENSMUSG00000024985.21_7	chr19	+	4173	15	FSM	ENSMUSG00000024985.21	ENST00000355995.8	4187	15	10	4	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAAGGCTGGCCGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	55730262	55922085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_55730963_55731207_55731275_55731504_55731630_55743445_55743515_55806195_55806298_55896854_55896988_55899010_55899114_55900990_55901078_55905785_55905912_55907316_55907477_55907942_55908051_55912327_55912377_55912961_55913013_55914408_55914482_55919865
ENSMUSG00000024986.13_0	chr19	+	1761	4	FSM	ENSMUSG00000024986.13	ENSMUST00000025944.9	1802	4	34	7	34	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGCCTTGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	37423291	37429172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37423682_37425636_37425816_37426014_37426066_37428031
ENSMUSG00000024987.7_0	chr19	+	1724	7	FSM	ENSMUSG00000024987.7	ENST00000371531.5	1735	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGCCCATGGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	37686051	37690013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37686257_37686738_37686964_37687228_37687520_37687598_37687758_37688343_37688479_37689065_37689219_37689457
ENSMUSG00000024989.16_0	chr19	+	2617	9	FSM	ENSMUSG00000024989.16	ENST00000371485.8	2634	9	9	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTACTGTGTCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	38043467	38062864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38043766_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUSG00000024989.16_10	chr19	+	2746	10	FSM	ENSMUSG00000024989.16	ENSMUST00000169673.3	2757	10	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTTTTACTGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	38043492	38062861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38043766_38045857_38046015_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061745
ENSMUSG00000024989.16_13	chr19	+	2661	10	FSM	ENSMUSG00000024989.16	ENSMUST00000237408.2	2683	10	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGTTTTACTGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	38043550	38062861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38043766_38045857_38045991_38046236_38046432_38048528_38048805_38051050_38051120_38057527_38057679_38058087_38058399_38059518_38059591_38060212_38060339_38061748
ENSMUSG00000024991.9_0	chr19	-	5121	22	FSM	ENSMUSG00000024991.9	ENSMUST00000025955.8	5125	22	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTTTTGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	60779077	60749554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60750743_60751502_60751703_60752469_60752672_60754771_60755434_60756012_60756102_60757145_60757331_60758303_60758458_60759452_60759576_60760081_60760196_60760530_60760636_60761129_60761478_60761944_60762131_60762338_60762456_60763730_60763830_60764188_60764294_60765063_60765236_60766376_60766586_60767795_60767996_60769791_60769956_60770322_60770460_60770605_60770797_60778906
ENSMUSG00000024993.16_0	chr19	+	2260	8	FSM	ENSMUSG00000024993.16	ENSMUST00000119633.8	2267	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATAAAAAGAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	60800028	60824658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_60800112_60803029_60803247_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_1	chr19	+	2300	9	FSM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATAAAAAGAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	60800048	60824658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_60800112_60803049_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024993.16_10	chr19	+	2237	8	ISM	ENSMUSG00000024993.16	ENSMUST00000025957.9	2307	9	3001	7	3001	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTATAAAAAGAACTACT	NA	NA	NA	NA	NA	NA	NA	NA	60803049	60824658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_60803247_60805968_60806049_60809644_60809794_60810732_60810845_60814268_60814370_60819224_60819333_60821021_60821117_60823263
ENSMUSG00000024997.8_0	chr19	-	1463	7	FSM	ENSMUSG00000024997.8	ENSMUST00000025961.7	1478	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTCTGGGGCACCGTT	NA	NA	NA	NA	NA	NA	NA	NA	60862984	60852493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60853158_60853603_60853770_60855953_60856058_60858441_60858578_60859857_60860000_60861565_60861702_60862869
ENSMUSG00000024999.8_0	chr19	-	3962	21	FSM	ENSMUSG00000024999.8	ENSMUST00000025963.8	3977	21	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTACTTCCTAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	38807673	38776578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_38778142_38778731_38778817_38781144_38781243_38782548_38782678_38783415_38783598_38783929_38784002_38784081_38784146_38784240_38784314_38787341_38787443_38787753_38787835_38792842_38792975_38795530_38795660_38795969_38796146_38798451_38798546_38798741_38798904_38800787_38800919_38802524_38802579_38803129_38803288_38804026_38804160_38806381_38806590_38807536
ENSMUSG00000025001.12_0	chr19	+	5836	22	FSM	ENSMUSG00000025001.12	ENSMUST00000025965.12	5868	22	17	15	17	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAGAAAGAAAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38919375	38959480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38919520_38919834_38919957_38923857_38923981_38926849_38926907_38928914_38928952_38929040_38929106_38930897_38930937_38932157_38932386_38933834_38934018_38935168_38935313_38938631_38938829_38940278_38940376_38941986_38942149_38943134_38943275_38943357_38943497_38945478_38945563_38945641_38945762_38947487_38947605_38948112_38948273_38953040_38953138_38953850_38953928_38956176
ENSMUSG00000025006.19_0	chr19	-	3562	29	FSM	ENSMUSG00000025006.19	ENSMUST00000225153.2	3589	29	20	7	-12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAGCCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40502160	40283221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40313190_40313277_40315893_40316067_40325429_40325480_40328488_40328591_40329128_40329195_40332799_40332884_40338342_40338458_40340720_40340851_40340961_40341010_40349485_40349549_40349872_40349948_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40386985_40387055_40390701_40390755_40439757_40439843_40501814
ENSMUSG00000025006.19_1	chr19	-	2916	26	FSM	ENSMUSG00000025006.19	ENST00000354106.7	2939	26	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCTATAAGAAGACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	40384205	40283502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40328488_40328591_40329128_40329195_40332799_40332884_40338342_40338458_40340720_40340851_40340961_40341010_40349872_40349948_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831_40381961_40384122
ENSMUSG00000025006.19_2	chr19	-	2838	25	ISM	ENSMUSG00000025006.19	ENST00000354106.7	2939	26	2255	8	2255	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTATAAGAAGACTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40381963	40283500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_40283561_40284975_40285089_40287906_40287966_40300112_40300308_40302807_40302934_40303060_40303176_40306465_40306513_40310236_40310405_40313190_40313277_40315893_40316067_40325429_40325480_40328488_40328591_40329128_40329195_40332799_40332884_40338342_40338458_40340720_40340851_40340961_40341010_40349872_40349948_40351645_40351710_40353437_40353611_40358133_40358164_40361919_40362062_40365088_40365461_40370964_40371078_40381831
ENSMUSG00000025007.14_2	chr19	-	3501	19	FSM	ENSMUSG00000025007.14	ENSMUST00000025979.13	3527	19	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGCCCATGTGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	40576892	40538711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40539774_40541967_40542064_40543034_40543222_40545862_40545985_40546094_40546291_40551345_40551484_40553279_40553501_40555015_40555110_40556765_40556840_40557476_40557622_40558911_40559037_40562214_40562306_40562654_40562814_40566021_40566127_40566215_40566366_40568305_40568521_40573933_40574050_40574570_40574637_40576753
ENSMUSG00000025008.16_2	chr19	-	1418	11	FSM	ENSMUSG00000025008.16	ENST00000680709.1	1440	11	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAAGGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40600207	40585633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40599737_40599857_40600094
ENSMUSG00000025008.16_3	chr19	-	1667	13	FSM	ENSMUSG00000025008.16	ENST00000265993.13	1695	13	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAAGGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40600201	40585633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594242_40594669_40594778_40595721_40595848_40596069_40596151_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094
ENSMUSG00000025008.16_4	chr19	-	1574	12	FSM	ENSMUSG00000025008.16	ENST00000680144.1	1599	12	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGAAAAGGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40600204	40585633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40585987_40591248_40591387_40593749_40593898_40594146_40594227_40594669_40594778_40595721_40595848_40596663_40596700_40597135_40597252_40597345_40597455_40597645_40597777_40599737_40599857_40600094
ENSMUSG00000025010.15_0	chr19	+	2181	6	FSM	ENSMUSG00000025010.15	ENST00000403870.7	2196	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCCGTGCAACATCGG	NA	NA	NA	NA	NA	NA	NA	NA	40819625	40835317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833524_40833649_40834142
ENSMUSG00000025010.15_2	chr19	+	3877	6	FSM	ENSMUSG00000025010.15	ENST00000265992.9	3891	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAATGGTCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40819624	40837009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833521_40833649_40834142
ENSMUSG00000025010.15_9	chr19	+	3810	6	FSM	ENSMUSG00000025010.15	ENSMUST00000025983.13	3819	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAATGGTCTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40819724	40837009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40819887_40820422_40820533_40825360_40825572_40833103_40833404_40833488_40833649_40834142
ENSMUSG00000025014.14_0	chr19	+	1583	11	FSM	ENSMUSG00000025014.14	ENST00000630152.1	1601	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCTTTTCGGTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	41017839	41047606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41018081_41025586_41025762_41027312_41027442_41028212_41028384_41029719_41029792_41031301_41031426_41034626_41034760_41035967_41036077_41041433_41041680_41044201_41044283_41047504
ENSMUSG00000025016.12_0	chr19	-	8080	14	FSM	ENSMUSG00000025016.12	ENSMUST00000025989.10	8096	14	16	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTTGCTTTCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	41252420	41199282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ENSMUSG00000025016.12_1	chr19	-	3157	15	FSM	ENSMUSG00000025016.12	ENSMUST00000237871.2	3170	15	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATTGTTTTGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	41252412	41202236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41203579_41205539_41205617_41205786_41205871_41206608_41206756_41209675_41209745_41211522_41211663_41220781_41220913_41223119_41223215_41227116_41227284_41229015_41229148_41233882_41233961_41235081_41235243_41236344_41236468_41244583_41244780_41252197
ENSMUSG00000025019.18_1	chr19	+	4694	7	FSM	ENSMUSG00000025019.18	ENST00000676123.1	4713	7	13	6	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCCTCTCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41471117	41550677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41471223_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_24	chr19	+	2426	9	FSM	ENSMUSG00000025019.18	ENST00000675537.1	2435	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCATGAGCCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	41471558	41550667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41471738_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749_41547754_41550159
ENSMUSG00000025019.18_3	chr19	+	2222	9	FSM	ENSMUSG00000025019.18	ENST00000540664.6	2256	9	2	32	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	41471143	41550685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749_41547632_41550159
ENSMUSG00000025019.18_39	chr19	+	4821	8	FSM	ENSMUSG00000025019.18	ENST00000356016.7	4831	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	41471587	41550685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41471738_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749
ENSMUSG00000025019.18_62	chr19	+	2265	8	FSM	ENSMUSG00000025019.18	ENST00000676381.1	2291	8	15	11	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCATGAGCCTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	41471662	41550667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749_41547469_41550159
ENSMUSG00000025019.18_9	chr19	+	1840	9	FSM	ENSMUSG00000025019.18	ENST00000676414.1	1876	9	4	32	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	41471145	41550685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41471223_41471965_41472040_41516459_41516526_41516999_41517080_41534313_41534447_41540887_41541176_41544046_41544141_41546749_41547252_41550159
ENSMUSG00000025024.8_0	chr19	-	1936	6	FSM	ENSMUSG00000025024.8	ENSMUST00000025997.7	1948	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTCCAGTGTGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	53379001	53367830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378846
ENSMUSG00000025024.8_3	chr19	-	1444	6	FSM	ENSMUSG00000025024.8	ENSMUST00000237529.2	1480	6	19	17	19	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACCAAACAAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	53378453	53368327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53369033_53369671_53369826_53371987_53372150_53372884_53373028_53377733_53377854_53378293
ENSMUSG00000025025.15_0	chr19	+	2597	6	FSM	ENSMUSG00000025025.15	ENSMUST00000003870.15	2627	6	21	9	21	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTGCAGTCGAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53298969	53361715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53299405_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUSG00000025025.15_1	chr19	+	5022	6	FSM	ENSMUSG00000025025.15	ENSMUST00000025998.15	5036	6	9	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAAATGGTCCACCTCA	NA	NA	NA	NA	NA	NA	NA	NA	53317897	53364236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53318237_53319781_53319915_53334881_53334912_53357972_53358088_53358620_53358793_53360003
ENSMUSG00000025026.16_0	chr19	+	4388	14	FSM	ENSMUSG00000025026.16	ENSMUST00000111741.10	4426	14	29	9	-5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATATGCATGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53128902	53235821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53129146_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
ENSMUSG00000025026.16_3	chr19	+	4281	14	FSM	ENSMUSG00000025026.16	ENSMUST00000050096.15	4297	14	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCTTGTTTTCAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	53131202	53235639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53131521_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53233428
ENSMUSG00000025026.16_4	chr19	+	4327	16	FSM	ENSMUSG00000025026.16	ENSMUST00000025999.7	4334	16	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATGCATGCGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53132427	53235823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53132450_53191844_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ENSMUSG00000025026.16_5	chr19	+	4299	15	ISM	ENSMUSG00000025026.16	ENSMUST00000236296.2	4075	16	8471	-309	8471	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCATGCGTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	53191854	53235827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_53191907_53205231_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ENSMUSG00000025026.16_6	chr19	+	4238	14	ISM	ENSMUSG00000025026.16	ENSMUST00000236296.2	4075	16	21851	-303	21851	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATATGCATGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53205234	53235821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_53205447_53215021_53215161_53219610_53219763_53220554_53220636_53221456_53221607_53222003_53222148_53222255_53222355_53223209_53223393_53225024_53225283_53226833_53226954_53227837_53227925_53230934_53231059_53232740_53232837_53233428
ENSMUSG00000025027.19_25	chr19	-	4014	21	FSM	ENSMUSG00000025027.19	ENSMUST00000183108.8	4078	21	46	18	46	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCATCAAAACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	53028599	52979631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_38	chr19	-	2367	20	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	6	-11	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAATAAAACCATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53027029	52979636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53026944
ENSMUSG00000025027.19_39	chr19	-	2287	19	NIC	ENSMUSG00000025027.19	novel	4078	21	NA	NA	5	-11	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAATAAAACCATCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53027030	52979636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53013689_53013815_53026944
ENSMUSG00000025027.19_6	chr19	-	3426	21	FSM	ENSMUSG00000025027.19	ENSMUST00000236058.2	3442	21	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCACGGGGAAGGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	53023810	52979086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439_53020529_53023288
ENSMUSG00000025027.19_7	chr19	-	2922	20	FSM	ENSMUSG00000025027.19	ENSMUST00000237294.2	2956	20	26	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGACGTCACGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	53020551	52979091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_52980151_52983851_52983951_52984679_52984757_52985330_52985505_52986304_52986375_52987582_52987644_52988819_52988892_52990904_52990983_52991109_52991169_52992194_52992246_52993194_52993285_52994585_52994797_52996301_52996384_52998498_52998595_53000196_53000341_53000619_53000713_53001829_53001935_53003041_53003106_53013689_53013815_53020439
ENSMUSG00000025034.10_0	chr19	+	3573	6	FSM	ENSMUSG00000025034.10	ENSMUST00000026008.9	3580	6	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGCCCAATGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	46490146	46505286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46491453_46501161_46501258_46501546_46501781_46502891_46502924_46503060_46503177_46503497
ENSMUSG00000025035.10_0	chr19	-	771	5	ISM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	14720	10	14720	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAAATAGTATTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	46546812	46519544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676
ENSMUSG00000025035.10_1	chr19	-	833	6	FSM	ENSMUSG00000025035.10	ENSMUST00000026009.10	843	6	0	10	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGAAATAGTATTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	46561532	46519544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46519826_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUSG00000025035.10_4	chr19	-	996	7	FSM	ENSMUSG00000025035.10	ENSMUST00000236255.2	1005	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGTTGAAATAGTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	46561629	46519546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46519826_46529881_46529950_46530790_46530977_46531920_46531972_46540011_46540129_46546676_46546821_46561478
ENSMUSG00000025036.8_0	chr19	+	3189	12	FSM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAACATGAAACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	46561813	46585326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46561899_46570922_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ENSMUSG00000025036.8_2	chr19	+	3105	11	ISM	ENSMUSG00000025036.8	ENSMUST00000026011.8	3205	12	9115	9	9115	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAACATGAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	46570920	46585325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_46571103_46571245_46571417_46574143_46574243_46576373_46576450_46576662_46576749_46578579_46578641_46578922_46578990_46579559_46579610_46579931_46579982_46580738_46580787_46583110
ENSMUSG00000025037.7_0	chrX	+	4154	15	FSM	ENSMUSG00000025037.7	ENSMUST00000026013.6	4167	15	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGATAGGCTTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	16485945	16554053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_16486153_16500420_16500516_16505302_16505441_16524806_16524912_16525683_16525776_16528555_16528698_16530889_16531040_16531890_16532051_16539085_16539183_16543793_16543848_16547052_16547111_16548439_16548538_16550202_16550315_16551220_16551284_16551470
ENSMUSG00000025040.14_0	chrX	-	1962	5	FSM	ENSMUSG00000025040.14	ENSMUST00000026016.13	1983	5	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAAGTGATTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	17438551	17422810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_17424251_17424919_17425049_17434271_17434348_17437541_17437699_17438391
ENSMUSG00000025041.18_10	chr19	-	2473	19	FSM	ENSMUSG00000025041.18	ENST00000675326.1	2485	19	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003232	46876712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46956280_46956382_47003106
ENSMUSG00000025041.18_11	chr19	-	2450	19	FSM	ENSMUSG00000025041.18	ENST00000676428.1	2458	19	8	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47003247	46876712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46979402_46979496_47003136
ENSMUSG00000025041.18_2	chr19	-	3678	17	ISM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	11350	6	10962	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTTTCCTAAGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	46939397	46875273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284
ENSMUSG00000025041.18_3	chr19	-	3722	18	FSM	ENSMUSG00000025041.18	ENSMUST00000168536.9	3728	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTTTCCTAAGTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	46950747	46875273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUSG00000025041.18_7	chr19	-	2430	17	FSM	ENSMUSG00000025041.18	ENST00000675985.1	2440	17	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46926034	46876712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46877491_46878208_46878386_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46925730
ENSMUSG00000025041.18_8	chr19	-	2093	17	ISM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	11374	0	10959	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46939400	46876712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46877491_46878208_46878237_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284
ENSMUSG00000025041.18_9	chr19	-	2160	18	FSM	ENSMUSG00000025041.18	ENST00000675645.1	2161	18	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTCATTCGGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	46950773	46876712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46877491_46878208_46878237_46878507_46878569_46878684_46878737_46879947_46880119_46880673_46880741_46880943_46881052_46881957_46882000_46882959_46883044_46884946_46885001_46886014_46886109_46887060_46887119_46887241_46887334_46892316_46892413_46893413_46893532_46912700_46912775_46939284_46939405_46950710
ENSMUSG00000025047.10_0	chr19	+	6753	36	FSM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACCTAAAATGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	47079206	47120296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47079307_47081220_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ENSMUSG00000025047.10_4	chr19	+	6657	35	ISM	ENSMUSG00000025047.10	ENSMUST00000072141.4	6761	36	2012	6	2012	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTAAAATGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47081218	47120298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_47081340_47082189_47082322_47083646_47083815_47085293_47085456_47086559_47086684_47087129_47087312_47089501_47089610_47091005_47091213_47092190_47092316_47092471_47092533_47093094_47093242_47094735_47094988_47095449_47095591_47095992_47096188_47096861_47097033_47097992_47098213_47099399_47099550_47100476_47100593_47101579_47102155_47102993_47103057_47105735_47105842_47107974_47108065_47108231_47108335_47108685_47108864_47112869_47112927_47113483_47113607_47114744_47114868_47115313_47115549_47115689_47115807_47116384_47116532_47116713_47116962_47117580_47117750_47118067_47118222_47118386_47118553_47119077
ENSMUSG00000025049.7_0	chr19	+	3255	11	FSM	ENSMUSG00000025049.7	ENSMUST00000026027.7	3260	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATTTATTGTACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	47056184	47071913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47056766_47059419_47059658_47063251_47063568_47064174_47064339_47064435_47064572_47065712_47065834_47067206_47067337_47068979_47069145_47070247_47070426_47070582_47070761_47070865
ENSMUSG00000025050.9_0	chr19	-	2143	10	FSM	ENSMUSG00000025050.9	ENSMUST00000026032.7	2159	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAATTTTGAGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47039333	47022061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47023125_47025676_47025764_47028482_47028582_47031204_47031233_47034248_47034358_47036385_47036446_47036546_47036603_47037238_47037336_47037428_47037529_47038889
ENSMUSG00000025059.17_0	chrX	-	4260	21	FSM	ENSMUSG00000025059.17	ENSMUST00000113978.9	4279	21	11	8	-5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTACATTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	84820248	84745550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_84748003_84749843_84749931_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84782827_84782846_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025059.17_2	chrX	-	4332	19	FSM	ENSMUSG00000025059.17	ENSMUST00000026039.15	4340	19	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTACATTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	84820425	84745550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_84748003_84754656_84754738_84755947_84756092_84756204_84756326_84756879_84756965_84757947_84758045_84759270_84759350_84773807_84773889_84774488_84774532_84780438_84780507_84780919_84780956_84783900_84783968_84784672_84784783_84787319_84787458_84789830_84789908_84797937_84798016_84804180_84804288_84804939_84805014_84820031
ENSMUSG00000025060.16_0	chr19	+	7260	18	FSM	ENSMUSG00000025060.16	ENSMUST00000026043.12	7278	18	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTTTGGGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	47568128	47633679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ENSMUSG00000025060.16_4	chr19	+	4222	19	FSM	ENSMUSG00000025060.16	ENSMUST00000051691.8	4239	19	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGATTTCTCAATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	47568468	47630888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47568783_47597343_47597509_47600013_47600063_47600340_47600491_47603634_47603708_47603844_47604040_47604960_47605043_47607629_47607759_47608041_47609392_47610674_47610806_47611009_47611134_47613743_47613924_47616086_47616180_47623907_47624038_47624781_47624907_47625648_47625838_47626080_47626207_47627314_47627429_47630385
ENSMUSG00000025066.11_0	chr19	+	1647	4	FSM	ENSMUSG00000025066.11	ENSMUST00000099353.6	1657	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATATCCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	47720130	47724027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47720261_47721068_47721428_47721957_47722351_47723262
ENSMUSG00000025068.9_0	chr19	+	1161	6	FSM	ENSMUSG00000025068.9	ENSMUST00000026050.8	1182	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATCGAAAACTGAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47843418	47853218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47843562_47843653_47843763_47846297_47846521_47847870_47847970_47851817_47851922_47852735
ENSMUSG00000025069.16_0	chr19	+	1329	9	FSM	ENSMUSG00000025069.16	ENSMUST00000056159.11	1351	9	14	8	14	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACGGGTCTGACTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	47854219	47874755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_47854369_47858124_47858200_47858647_47858763_47860092_47860243_47860454_47860564_47863268_47863492_47864834_47864937_47873094_47873202_47874456
ENSMUSG00000025076.13_0	chr19	+	2343	7	FSM	ENSMUSG00000025076.13	ENSMUST00000026062.10	2350	7	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTCCTGACTGGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	56385562	56430771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_56385750_56392847_56392958_56421673_56421811_56422233_56422363_56424658_56424835_56425150_56425281_56429297
ENSMUSG00000025077.14_0	chr19	-	4056	10	FSM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAACTTACCAGAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	56536654	56517610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068_56536136_56536618
ENSMUSG00000025077.14_1	chr19	-	4013	9	ISM	ENSMUSG00000025077.14	ENSMUST00000182276.2	4066	10	526	10	526	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAACTTACCAGAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	56536128	56517610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_56518095_56519648_56519791_56525559_56525715_56526728_56526875_56528613_56528755_56529936_56530056_56531064_56531199_56532446_56534079_56535068
ENSMUSG00000025078.10_0	chr19	+	8578	11	FSM	ENSMUSG00000025078.10	ENSMUST00000071423.7	8591	11	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGTGTTTCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	56536702	56591932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_56537293_56540190_56540344_56558847_56559304_56563189_56563312_56564586_56564717_56576601_56576702_56580007_56580240_56580824_56580948_56582091_56582299_56583231_56583452_56585687
ENSMUSG00000025082.9_0	chr19	+	1863	8	FSM	ENSMUSG00000025082.9	ENST00000603594.2	1872	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAACACATCTGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	56882206	56897825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_56882308_56886305_56886498_56889959_56890094_56890667_56890801_56891898_56891955_56893910_56894023_56894821_56895395_56897263
ENSMUSG00000025083.19_0	chr19	-	3527	19	FSM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTTGGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56996630	56900796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56996582
ENSMUSG00000025083.19_1	chr19	-	3469	18	ISM	ENSMUSG00000025083.19	ENSMUST00000118800.8	3531	19	57942	4	57942	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTTGGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56938688	56900796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569
ENSMUSG00000025083.19_2	chr19	-	3532	19	ISM	ENSMUSG00000025083.19	ENSMUST00000111584.9	3597	20	5908	4	5896	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTTGGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56990734	56900796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56990681
ENSMUSG00000025083.19_3	chr19	-	3593	20	FSM	ENSMUSG00000025083.19	ENSMUST00000111584.9	3597	20	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTTGGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56996642	56900796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56990681_56990736_56996582
ENSMUSG00000025083.19_5	chr19	-	3647	21	FSM	ENSMUSG00000025083.19	ENSMUST00000122359.8	3667	21	16	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTTGGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	56996644	56900796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56901841_56902556_56902686_56902801_56902996_56904103_56904260_56904493_56904675_56904755_56905005_56905557_56905670_56906413_56906560_56908808_56909021_56911366_56911472_56911964_56912050_56913498_56913589_56916680_56916861_56918487_56918694_56925666_56925758_56931876_56931972_56933136_56933212_56938569_56938699_56952261_56952305_56953228_56953292_56996582
ENSMUSG00000025085.17_19	chr19	-	2428	21	FSM	ENSMUSG00000025085.17	ENST00000392955.7	2446	21	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCCACACGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	57161883	57025306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756
ENSMUSG00000025085.17_20	chr19	-	2436	21	FSM	ENSMUSG00000025085.17	ENST00000533213.6	2455	21	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	4230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGCCACACGGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	57161882	57025306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_57025770_57027838_57027920_57028918_57029008_57030346_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756
ENSMUSG00000025085.17_69	chr19	-	2540	22	FSM	ENSMUSG00000025085.17	ENST00000277895.9	2559	22	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGCAGTAACGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	57204381	57025438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_57025770_57027838_57027920_57028918_57028994_57030341_57030408_57031428_57031494_57032227_57032331_57033312_57033405_57035356_57035498_57037893_57037942_57039561_57039667_57049684_57049815_57052197_57052234_57056522_57056679_57057291_57057370_57068244_57068304_57071947_57072036_57121293_57121388_57123013_57123141_57140704_57140815_57143583_57143768_57161756_57161892_57204145
ENSMUSG00000025086.14_0	chr19	+	3772	8	FSM	ENSMUSG00000025086.14	ENSMUST00000026073.14	3789	8	11	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACACGAGTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	57441354	57479431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57475696_57475754_57476440
ENSMUSG00000025086.14_1	chr19	+	1537	7	FSM	ENSMUSG00000025086.14	ENSMUST00000026072.5	1564	7	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTTTAAAGTTGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	57441386	57474628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_57441629_57446521_57446621_57452801_57452858_57461130_57461213_57472012_57472086_57473504_57473645_57473783
ENSMUSG00000025089.16_0	chr19	-	4607	11	FSM	ENSMUSG00000025089.16	ENSMUST00000026076.14	4641	11	13	21	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAATATAGACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	58443817	58224056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58381004_58381020_58440400_58440485_58441595_58441890_58442740_58443027_58443629
ENSMUSG00000025089.16_1	chr19	-	4546	10	NIC	ENSMUSG00000025089.16	novel	4641	11	NA	NA	-31	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGACATTAAAGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	58443764	58224049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58440400_58440485_58441595_58441890_58442740_58443027_58443629
ENSMUSG00000025089.16_2	chr19	-	4393	9	FSM	ENSMUSG00000025089.16	ENSMUST00000129100.8	4415	9	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAATATAGACA	NA	NA	NA	NA	NA	NA	NA	NA	58443019	58224060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58440400_58440485_58441595_58441890_58442740
ENSMUSG00000025089.16_4	chr19	-	3218	10	FSM	ENSMUSG00000025089.16	ENSMUST00000169850.8	3224	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGAGGGACTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58442898	58225129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58381004_58381020_58440400_58440485_58441595_58441890_58442740
ENSMUSG00000025089.16_5	chr19	-	1931	11	FSM	ENSMUSG00000025089.16	ENSMUST00000152507.8	1937	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACTGTTTGTAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	58443731	58226597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58226979_58227685_58227740_58252343_58252526_58255430_58255566_58258485_58258596_58288673_58289011_58381004_58381020_58440400_58440485_58441595_58441890_58442740_58443027_58443678
ENSMUSG00000025091.5_2	chr19	+	1000	8	FSM	ENSMUSG00000025091.5	ENST00000579578.6	1014	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTAAGTTTCCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	58748793	58759891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_58748940_58749997_58750124_58750681_58750817_58751760_58751873_58753159_58753280_58754693_58754828_58757013_58757115_58759765
ENSMUSG00000025092.8_0	chr19	-	5724	12	FSM	ENSMUSG00000025092.8	ENSMUST00000066285.6	5734	12	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACACGGCCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	58849413	58784188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58788431_58789244_58789349_58792897_58793157_58793832_58793938_58794457_58794545_58797881_58798054_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ENSMUSG00000025092.8_1	chr19	-	1374	7	FSM	ENSMUSG00000025092.8	ENSMUST00000235263.2	1400	7	24	2	24	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACTTCTGTCAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	58849375	58808152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58808810_58809431_58809549_58810495_58810601_58813682_58813870_58815987_58816113_58816684_58816771_58849278
ENSMUSG00000025094.9_0	chr19	+	3763	16	FSM	ENSMUSG00000025094.9	ENSMUST00000026084.5	3785	16	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGCTGTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	59249342	59284437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_59249451_59249752_59249886_59251371_59251724_59261313_59261373_59261646_59261731_59261962_59262056_59262745_59262836_59262925_59262970_59263047_59263109_59264921_59265018_59272530_59272610_59272778_59272831_59273690_59273755_59275480_59275601_59275733_59275868_59282243
ENSMUSG00000025102.15_0	chr7	-	868	5	FSM	ENSMUSG00000025102.15	ENSMUST00000026092.9	887	5	8	11	8	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGAGCAATGGCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	81439218	81431940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_81432330_81432778_81432887_81435824_81435953_81438197_81438325_81439102
ENSMUSG00000025103.9_0	chr7	-	2991	8	FSM	ENSMUSG00000025103.9	ENSMUST00000026093.9	3001	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTATTTGTCACCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	81479170	81441822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_81443475_81443905_81444053_81446743_81446832_81450705_81450899_81455489_81455688_81465662_81465769_81467942_81468100_81478720
ENSMUSG00000025104.14_0	chr7	-	5506	7	FSM	ENSMUSG00000025104.14	ENST00000299633.7	5528	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATTCAAAAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	81584135	81531120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_81533875_81534047_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ENSMUSG00000025104.14_1	chr7	-	5512	7	NNC	ENSMUSG00000025104.14	novel	5528	7	NA	NA	4	-11	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGACAACATTCAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	81584145	81531123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_81533874_81534047_81535832_81543546_81543694_81549421_81549578_81550032_81550172_81555307_81555385_81583686
ENSMUSG00000025127.16_0	chr11	+	1296	9	FSM	ENSMUSG00000025127.16	ENST00000570996.5	1311	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGGTAGGTGAAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120425744	120428978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120425845_120426885_120426994_120427070_120427193_120427287_120427395_120427482_120427881_120427954_120428016_120428144_120428215_120428528_120428618_120428737
ENSMUSG00000025127.16_6	chr11	+	1194	8	ISM	ENSMUSG00000025127.16	ENST00000570996.5	1311	9	1147	11	1147	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGAGGTAGGTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	120426884	120428975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_120426994_120427070_120427193_120427287_120427395_120427482_120427881_120427954_120428016_120428144_120428215_120428528_120428618_120428737
ENSMUSG00000025129.3_0	chr11	-	754	3	FSM	ENSMUSG00000025129.3	ENSMUST00000026121.3	771	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTCCCAAGCTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	120441952	120440815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120441156_120441437_120441589_120441689
ENSMUSG00000025129.3_1	chr11	-	609	3	FSM	ENSMUSG00000025129.3	ENST00000570394.1	623	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGAGAGCCCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	120441877	120441032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120441303_120441437_120441589_120441689
ENSMUSG00000025130.12_0	chr11	-	2845	11	FSM	ENSMUSG00000025130.12	ENSMUST00000026122.11	2861	11	10	6	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATTGTCACTGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120464069	120451129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_110	chr11	-	1891	10	FSM	ENSMUSG00000025130.12	ENST00000570907.6	1907	10	11	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTCTTGAAGGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	120463668	120451798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_18	chr11	-	2314	10	FSM	ENSMUSG00000025130.12	ENST00000571617.2	2333	10	10	9	5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTACTACCCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120463674	120451139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_20	chr11	-	2395	11	FSM	ENSMUSG00000025130.12	ENST00000680914.1	2413	11	10	8	-5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTACTACCCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120463689	120451139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454495_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025130.12_58	chr11	-	2487	11	FSM	ENSMUSG00000025130.12	ENST00000680191.1	2507	11	12	8	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGTTGAAATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	120463672	120451150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463422
ENSMUSG00000025130.12_76	chr11	-	2303	10	FSM	ENSMUSG00000025130.12	ENST00000439918.7	2320	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTACCATAATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	120463716	120451186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120452986_120453074_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120462344_120462554_120463482
ENSMUSG00000025130.12_78	chr11	-	2257	10	FSM	ENSMUSG00000025130.12	ENST00000679439.1	2279	10	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTACCATAATATTGGA	NA	NA	NA	NA	NA	NA	NA	NA	120463625	120451186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120452087_120453189_120453372_120453480_120453602_120454030_120454232_120454428_120454555_120454641_120454747_120458743_120458882_120458999_120459134_120462346_120462554_120463482
ENSMUSG00000025132.14_0	chr11	-	1856	6	FSM	ENSMUSG00000025132.14	ENSMUST00000106197.10	1867	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120472440	120468930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120472347
ENSMUSG00000025132.14_1	chr11	-	1764	5	ISM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	986	-4	-20	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGGTCTGTGCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120471220	120468930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007
ENSMUSG00000025132.14_12	chr11	-	2131	6	FSM	ENSMUSG00000025132.14	ENSMUST00000067936.6	2150	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGTCTGGGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120472195	120468942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471220_120471815
ENSMUSG00000025132.14_18	chr11	-	1351	6	FSM	ENSMUSG00000025132.14	ENST00000541078.6	1357	6	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCTAACTCTTAACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120472130	120469575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120470257_120470341_120470406_120470493_120470571_120470792_120470877_120471007_120471327_120472004
ENSMUSG00000025132.14_22	chr11	-	612	2	FSM	ENSMUSG00000025132.14	ENST00000581876.5	624	2	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGTTCCAGCCCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120471190	120469827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120470257_120471007
ENSMUSG00000025133.10_1	chr7	+	3212	23	FSM	ENSMUSG00000025133.10	ENSMUST00000026126.10	3240	23	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAGAAAACACCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	97130177	97190588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97130358_97134123_97134319_97136558_97136677_97140137_97140245_97144863_97145050_97148755_97148807_97150176_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97175835_97175930_97178420_97178502_97179506_97179638_97179958_97180019_97183577_97183738_97184347_97184492_97187106_97187228_97190218
ENSMUSG00000025133.10_22	chr7	+	1244	10	FSM	ENSMUSG00000025133.10	ENST00000587624.6	1260	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTGAGTATTTTGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	97150952	97180014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179958
ENSMUSG00000025133.10_9	chr7	+	1777	14	FSM	ENSMUSG00000025133.10	ENST00000438455.3	1783	14	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTGTGAGGTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	97150178	97184489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97150266_97150934_97151056_97155270_97155343_97156922_97157098_97158797_97159004_97162733_97162877_97165432_97165549_97166828_97166963_97168254_97168413_97178420_97178502_97179515_97179638_97179958_97180019_97183577_97183738_97184347
ENSMUSG00000025134.3_0	chr11	-	3501	6	FSM	ENSMUSG00000025134.3	ENSMUST00000026125.3	3527	6	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATCAGAGTTGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	120489176	120482957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120485694_120485805_120485981_120486080_120486145_120486745_120486894_120488460_120488593_120488930
ENSMUSG00000025135.13_0	chr11	+	371	3	FSM	ENSMUSG00000025135.13	ENST00000571570.5	387	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGTGCCGTGCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	120488570	120496251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120488670_120490067_120490195_120496106
ENSMUSG00000025135.13_5	chr11	+	3217	3	FSM	ENSMUSG00000025135.13	ENSMUST00000026128.10	3229	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCACTTTTGATCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	120489258	120499024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120489431_120490067_120490195_120496106
ENSMUSG00000025135.13_9	chr11	+	944	3	FSM	ENSMUSG00000025135.13	ENSMUST00000093140.5	962	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAATAATGGCCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	120489366	120496593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120489697_120490067_120490195_120496106
ENSMUSG00000025137.16_1	chr11	-	1865	14	FSM	ENSMUSG00000025137.16	ENSMUST00000026129.16	1881	14	11	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1032	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACTCTGTAGGCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	120508751	120500917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120501598_120501701_120501791_120501938_120502005_120502173_120502240_120502453_120502532_120502826_120502910_120503288_120503428_120503855_120503910_120504204_120504250_120504466_120504552_120505156_120505224_120506116_120506279_120506674_120506764_120508589
ENSMUSG00000025138.15_0	chr11	-	1708	10	FSM	ENSMUSG00000025138.15	ENSMUST00000080202.12	1727	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTTTGGTGTCCCGAT	NA	NA	NA	NA	NA	NA	NA	NA	120515827	120509203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120509876_120510988_120511096_120511249_120511331_120511472_120511710_120511782_120511882_120512806_120512880_120512966_120513038_120515315_120515421_120515498_120515637_120515702
ENSMUSG00000025139.15_0	chr7	-	3769	6	FSM	ENSMUSG00000025139.15	ENSMUST00000001950.12	3788	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTTACTATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	141456214	141435328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141438319_141443243_141443335_141444438_141444592_141445720_141445904_141446476_141446627_141456012
ENSMUSG00000025139.15_9	chr7	-	515	4	FSM	ENSMUSG00000025139.15	ENST00000525159.5	525	4	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAGGTGTGTACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	141456140	141443250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141443335_141444438_141444592_141446476_141446627_141456012
ENSMUSG00000025140.16_14	chr11	-	894	6	ISM	ENSMUSG00000025140.16	ENST00000403172.8	962	7	501	9	-38	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGATTTGTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120534090	120531023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ENSMUSG00000025140.16_15	chr11	-	784	6	FSM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGATTTGTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120534051	120531023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120531175_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ENSMUSG00000025140.16_16	chr11	-	714	5	ISM	ENSMUSG00000025140.16	ENST00000577756.5	794	6	267	9	267	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGATTTGTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120533785	120531023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120531175_120532254_120532348_120532475_120532698_120532940_120533121_120533717
ENSMUSG00000025140.16_17	chr11	-	953	7	FSM	ENSMUSG00000025140.16	ENST00000403172.8	962	7	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGATTTGTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120534591	120531023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120531175_120531967_120532132_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_18	chr11	-	1046	8	FSM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGATTTGTCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120534591	120531023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534096_120534537
ENSMUSG00000025140.16_6	chr11	-	996	7	ISM	ENSMUSG00000025140.16	ENST00000619204.4	1055	8	496	5	-43	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTGTCTGCCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	120534095	120531019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984
ENSMUSG00000025140.16_7	chr11	-	1840	8	FSM	ENSMUSG00000025140.16	ENSMUST00000026133.15	1861	8	3	18	3	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATAAAAAAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120534571	120530259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120531175_120531967_120532132_120532254_120532348_120532475_120532698_120532940_120533121_120533717_120533789_120533984_120534114_120534505
ENSMUSG00000025142.19_0	chr11	+	1809	16	FSM	ENSMUSG00000025142.19	ENSMUST00000026135.15	1820	16	8	3	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120563825	120600270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_12	chr11	+	1787	16	FSM	ENSMUSG00000025142.19	ENST00000306739.9	1798	16	9	2	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120563886	120600270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579443_120579774_120580230_120591969_120592110_120592306_120592389_120593309_120593377_120594428_120594492_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025142.19_26	chr11	+	1676	15	FSM	ENSMUSG00000025142.19	ENSMUST00000106158.9	1690	15	14	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGAGTTTCTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120563895	120600270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120563997_120564865_120564922_120568336_120568452_120569245_120569347_120577469_120577528_120579354_120579429_120579737_120580168_120591969_120592110_120592306_120592389_120593309_120593377_120594897_120594951_120599483_120599536_120599755_120599826_120599896_120600073_120600169
ENSMUSG00000025144.18_0	chr11	-	605	5	FSM	ENSMUSG00000025144.18	ENSMUST00000055424.13	606	5	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120604564	120601768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120604518
ENSMUSG00000025144.18_1	chr11	-	509	3	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	1974	1	1974	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120602584	120601768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120602133_120602215_120602305_120602528
ENSMUSG00000025144.18_2	chr11	-	804	5	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	1048	1	1048	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120603510	120601768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265
ENSMUSG00000025144.18_3	chr11	-	872	6	FSM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120604558	120601768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669_120602722_120603265_120603539_120604518
ENSMUSG00000025144.18_6	chr11	-	555	4	ISM	ENSMUSG00000025144.18	ENSMUST00000106154.8	873	6	1841	1	1841	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGCTTTCTCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	120602717	120601768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120602133_120602215_120602305_120602528_120602583_120602669
ENSMUSG00000025145.14_0	chr11	+	2476	18	FSM	ENSMUSG00000025145.14	ENSMUST00000026139.14	2492	18	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTCTCGTCCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120604761	120611949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120604880_120605098_120605355_120605743_120605806_120605975_120606047_120606246_120606426_120606631_120606761_120607881_120607995_120608305_120608365_120608650_120608729_120608862_120608999_120609069_120609148_120609267_120609380_120609475_120609547_120609865_120609959_120610291_120610385_120610759_120610934_120611011_120611160_120611443
ENSMUSG00000025147.8_0	chr7	-	1642	6	FSM	ENSMUSG00000025147.8	ENSMUST00000211000.2	1646	6	3	1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCCATTTCATATTAT	NA	NA	NA	NA	NA	NA	NA	NA	141614783	141562272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141586872_141587030_141614721
ENSMUSG00000025147.8_3	chr7	-	1402	4	ISM	ENSMUSG00000025147.8	ENSMUST00000209732.2	977	5	9569	-670	9569	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGAGCCTGTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	141570243	141562294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081
ENSMUSG00000025147.8_4	chr7	-	1476	5	FSM	ENSMUSG00000025147.8	ENSMUST00000084418.4	1490	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGAGCCTGTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	141614796	141562294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141563316_141563989_141564115_141569815_141569910_141570081_141570243_141614721
ENSMUSG00000025150.11_0	chr11	-	1090	8	FSM	ENSMUSG00000025150.11	ENSMUST00000026148.9	1110	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTAACTATTGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	120622928	120620322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120620652_120620740_120620859_120621082_120621148_120621249_120621350_120621443_120621487_120621570_120621726_120621831_120621930_120622746
ENSMUSG00000025151.17_0	chrX	-	2803	13	FSM	ENSMUSG00000025151.17	ENSMUST00000026142.8	2821	13	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	7897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTAAGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93585739	93579087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93579284_93579465_93579852_93580479_93580595_93580899_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050_93582115_93582212_93582888_93583460_93584154_93584856_93584931_93585497
ENSMUSG00000025151.17_8	chrX	-	825	8	FSM	ENSMUSG00000025151.17	ENST00000485287.5	835	8	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCAGAATGCCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	93582113	93579598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93579852_93580479_93580627_93580895_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789_93581870_93582050
ENSMUSG00000025151.17_9	chrX	-	757	7	ISM	ENSMUSG00000025151.17	ENST00000485287.5	835	8	251	8	251	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCAGAATGCCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	93581864	93579598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_93579852_93580479_93580627_93580895_93580963_93581147_93581191_93581281_93581362_93581579_93581672_93581789
ENSMUSG00000025153.10_0	chr11	-	10032	43	FSM	ENSMUSG00000025153.10	ENSMUST00000055655.9	10050	43	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTCAAAGTTGCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	120715365	120696681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120698818_120698900_120699153_120699327_120699427_120699544_120699766_120699850_120700079_120700251_120700441_120700629_120700876_120700955_120701108_120701262_120701355_120701466_120701619_120701737_120701940_120702116_120702341_120702425_120702549_120702663_120702784_120702864_120703044_120703125_120703277_120703483_120703688_120703795_120703951_120704035_120704155_120704231_120704397_120704479_120704867_120705302_120705590_120705837_120706042_120706116_120706297_120706436_120706617_120706707_120706789_120706865_120707058_120707130_120707304_120707447_120707564_120707672_120707877_120707950_120708086_120708298_120708394_120708811_120709002_120709258_120709447_120709563_120710027_120710628_120710764_120710854_120710971_120711070_120711194_120711357_120711559_120711724_120711899_120712903_120713057_120713542_120713679_120714855
ENSMUSG00000025154.16_0	chr19	-	5090	12	FSM	ENSMUSG00000025154.16	ENSMUST00000026150.15	5103	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTGTGGGTTCTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	41790476	41755029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41790410
ENSMUSG00000025154.16_1	chr19	-	1609	11	ISM	ENSMUSG00000025154.16	ENST00000371027.5	1671	12	3006	0	6	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGGAAGTGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41780447	41758440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185
ENSMUSG00000025154.16_2	chr19	-	1521	10	FSM	ENSMUSG00000025154.16	ENST00000358308.7	1528	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGGAAGTGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41780446	41758440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41773210_41773438_41774996_41775207_41776744_41776826_41780185
ENSMUSG00000025154.16_3	chr19	-	1671	12	FSM	ENSMUSG00000025154.16	ENST00000371027.5	1671	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGGAAGTGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	41783453	41758440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41758636_41761488_41761568_41762504_41762616_41767548_41767648_41769596_41769789_41770769_41770836_41772764_41772852_41773210_41773438_41774996_41775207_41776744_41776826_41780185_41780452_41783395
ENSMUSG00000025155.16_0	chr11	-	1842	14	FSM	ENSMUSG00000025155.16	ENSMUST00000106135.8	1863	14	12	9	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCATTTGCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120687217	120680035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682787_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120687044
ENSMUSG00000025155.16_1	chr11	-	1889	14	FSM	ENSMUSG00000025155.16	ENSMUST00000167023.8	1909	14	12	8	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCATTTGCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120687209	120680035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682856_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUSG00000025155.16_4	chr11	-	1885	14	NIC	ENSMUSG00000025155.16	novel	1930	14	NA	NA	20	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCATTTGCAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120687201	120680035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_120680386_120680482_120680559_120680668_120680707_120682030_120682177_120682680_120682770_120682852_120682954_120683180_120683326_120683516_120683621_120683853_120683937_120684659_120684773_120685093_120685145_120685728_120685838_120686302_120686550_120686968
ENSMUSG00000025156.18_0	chr11	+	1499	14	FSM	ENSMUSG00000025156.18	ENST00000624957.3	1510	14	2	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGAAAGGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120675100	120679561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677115_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_11	chr11	+	1835	14	FSM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	1	7	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGCCCCAAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120675111	120679920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_14	chr11	+	1822	14	FSM	ENSMUSG00000025156.18	ENSMUST00000116305.8	1827	14	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCCCAAGGCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120675130	120679923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_26	chr11	+	1981	14	FSM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	14	5	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCCCAAGGCTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120675354	120679923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120675552_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_33	chr11	+	1777	13	ISM	ENSMUSG00000025156.18	ENSMUST00000208737.2	1843	14	837	7	607	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGCCCCAAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120675947	120679920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677837_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_39	chr11	+	1773	13	ISM	ENSMUSG00000025156.18	ENSMUST00000172809.2	2000	14	614	8	614	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGCCCCAAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120675954	120679920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287_120679423_120679495
ENSMUSG00000025156.18_7	chr11	+	1920	13	FSM	ENSMUSG00000025156.18	ENSMUST00000100134.10	1925	13	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTGCCCCAAGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120675102	120679920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120675169_120675946_120676040_120676525_120676708_120677127_120677293_120677377_120677514_120677597_120677676_120677834_120677896_120678205_120678292_120678522_120678618_120678701_120678808_120678887_120678969_120679069_120679208_120679287
ENSMUSG00000025157.9_0	chr19	+	1802	11	FSM	ENSMUSG00000025157.9	ENSMUST00000026154.9	1821	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGATATGTAGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	41921938	41932534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41922105_41923176_41923323_41926041_41926290_41926461_41926657_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025157.9_5	chr19	+	1083	8	FSM	ENSMUSG00000025157.9	ENST00000345745.9	1099	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAAATAAGTTTTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	41926048	41932329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41926290_41926802_41926892_41927246_41927276_41928038_41928173_41929088_41929175_41929954_41930079_41930374_41930446_41932020
ENSMUSG00000025158.8_0	chr11	-	2104	8	FSM	ENSMUSG00000025158.8	ENSMUST00000026156.8	2118	8	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTAGTGTGGCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	120675023	120671577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120672730_120672804_120672891_120673208_120673375_120673454_120673544_120673832_120673987_120674093_120674197_120674560_120674610_120674718
ENSMUSG00000025158.8_2	chr11	-	578	5	FSM	ENSMUSG00000025158.8	ENST00000429557.7	593	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGTGAGTGGGCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	120674177	120672809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120672891_120673208_120673375_120673454_120673544_120673828_120673987_120674093
ENSMUSG00000025159.9_3	chr19	-	6599	31	FSM	ENSMUSG00000025159.9	ENSMUST00000171561.8	6607	31	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAACCTTGTCCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	41969592	41929528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41933020_41933095_41933197_41933767_41933828_41933897_41934063_41934171_41934255_41935355_41935543_41936128_41936186_41936654_41936756_41937893_41938021_41938207_41938277_41938419_41938523_41939190_41939291_41940845_41941002_41942107_41942258_41942355_41942457_41942904_41942987_41943171_41943298_41943556_41943636_41943857_41944013_41944261_41944401_41944947_41945026_41945579_41945655_41946296_41946384_41951238_41951301_41951388_41951518_41951839_41951910_41952301_41952377_41952756_41952843_41954652_41954754_41958141_41958191_41969437
ENSMUSG00000025161.17_0	chr11	+	2378	5	FSM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTGGGCTTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	120839894	120849820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120839977_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUSG00000025161.17_1	chr11	+	4328	6	FSM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATCATGATGTAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	120839910	120851691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120839977_120844999_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUSG00000025161.17_2	chr11	+	4261	5	ISM	ENSMUSG00000025161.17	ENSMUST00000168579.8	4335	6	5094	3	5094	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATCATGATGTAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	120845000	120851691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_120845095_120846051_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUSG00000025161.17_3	chr11	+	2299	4	ISM	ENSMUSG00000025161.17	ENSMUST00000100130.10	2386	5	6156	6	6142	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGTGGGCTTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	120846048	120849820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_120846296_120846624_120846769_120847180_120847949_120848680
ENSMUSG00000025162.19_2	chr11	-	2656	10	FSM	ENSMUSG00000025162.19	ENST00000314028.10	2674	10	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120882174	120852580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120852970_120854000_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_3	chr11	-	3655	9	FSM	ENSMUSG00000025162.19	ENSMUST00000018274.10	3675	9	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120882142	120852580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120854733_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025162.19_6	chr11	-	3482	10	FSM	ENSMUSG00000025162.19	ENSMUST00000070575.14	3500	10	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTCCCTCCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120881906	120852580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120854733_120855773_120855837_120858820_120858961_120859848_120860021_120862392_120862542_120863202_120863374_120863791_120864021_120864646_120864796_120874058_120874170_120881760
ENSMUSG00000025169.7_0	chr11	-	1290	9	FSM	ENSMUSG00000025169.7	ENSMUST00000026169.7	1308	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCAAGTGTGTGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121095526	121068423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121068765_121074236_121074361_121085905_121086060_121087562_121087620_121088256_121088322_121090591_121090635_121091736_121091813_121093716_121093935_121095314
ENSMUSG00000025170.14_0	chr11	-	1844	6	FSM	ENSMUSG00000025170.14	ENSMUST00000106107.3	1861	6	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTCGTGGTATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	121279061	121246951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121248135_121248685_121248909_121249600_121249679_121250385_121250447_121254329_121254391_121278823
ENSMUSG00000025170.14_1	chr11	-	681	6	FSM	ENSMUSG00000025170.14	ENST00000538809.6	693	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAGAGCCCGCCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121279012	121247914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121248135_121248685_121248758_121249600_121249679_121250385_121250447_121254329_121254391_121278823
ENSMUSG00000025171.3_0	chr19	+	1516	3	FSM	ENSMUSG00000025171.3	ENSMUST00000026170.3	1529	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTAGCACATGACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	41970214	42023082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41970448_42020327_42020556_42022027
ENSMUSG00000025172.4_0	chr19	+	1130	9	FSM	ENSMUSG00000025172.4	ENSMUST00000238137.2	1138	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGGCGTTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	42024446	42033549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42024562_42028288_42028391_42028522_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032191_42032291_42032481_42032581_42033299
ENSMUSG00000025172.4_1	chr19	+	744	7	FSM	ENSMUSG00000025172.4	ENST00000455090.1	754	7	3	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTGAGTCTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	42024477	42032574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42024562_42028288_42028391_42028522_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032481
ENSMUSG00000025172.4_3	chr19	+	659	6	ISM	ENSMUSG00000025172.4	ENST00000455090.1	754	7	3812	10	3810	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCTGGTGAGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	42028286	42032571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_42028391_42028522_42028682_42028774_42028883_42030390_42030490_42030807_42030907_42032481
ENSMUSG00000025173.14_0	chr11	-	1475	11	FSM	ENSMUSG00000025173.14	ENST00000392325.9	1491	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTAAAGAGCAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	121245209	121218058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121218276_121219050_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUSG00000025173.14_1	chr11	-	2304	10	FSM	ENSMUSG00000025173.14	ENSMUST00000026173.13	2321	10	8	9	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGTAAAGAGCAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	121245263	121218058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121219291_121219618_121219741_121220151_121220254_121220972_121221059_121226209_121226401_121227801_121227897_121229382_121229471_121231939_121232042_121240057_121240133_121245052
ENSMUSG00000025175.13_0	chr11	+	1039	6	FSM	ENSMUSG00000025175.13	ENSMUST00000026175.9	1047	6	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACTGGGCTACTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121325742	121341313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121325956_121328098_121328251_121330111_121330204_121330896_121330980_121339707_121339831_121340937
ENSMUSG00000025176.15_0	chr19	+	1633	7	FSM	ENSMUSG00000025176.15	ENSMUST00000081714.5	1668	7	15	20	15	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATCAAAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42034285	42059372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42034550_42048326_42048456_42048605_42048734_42049366_42049502_42049741_42049839_42051630_42051765_42058626
ENSMUSG00000025178.10_1	chr19	+	2241	10	FSM	ENSMUSG00000025178.10	ENST00000370631.3	2261	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAGACAAGATAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	42078892	42110496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231_42108780_42110129
ENSMUSG00000025178.10_10	chr19	+	3590	9	FSM	ENSMUSG00000025178.10	ENSMUST00000066778.6	3604	9	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGACAAAGACACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	42078919	42110522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42079376_42089075_42089277_42093296_42093429_42093768_42093923_42101481_42101544_42103475_42103576_42104323_42104458_42104945_42105006_42108231
ENSMUSG00000025184.11_0	chr19	+	4099	7	FSM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATATATTACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	42507203	42580775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42507297_42550990_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUSG00000025184.11_1	chr19	+	4007	6	ISM	ENSMUSG00000025184.11	ENSMUST00000026188.10	4112	7	43792	7	43753	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTATATATTACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	42550989	42580775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_42552781_42564464_42564641_42570358_42570430_42571263_42571360_42571841_42571983_42579043
ENSMUSG00000025185.15_0	chr19	-	3723	15	FSM	ENSMUSG00000025185.15	ENSMUST00000026190.14	3738	15	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGCTACAAAATAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	42601248	42582431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690_42596987_42601156
ENSMUSG00000025185.15_2	chr19	-	3632	14	FSM	ENSMUSG00000025185.15	ENSMUST00000171432.2	2274	14	-17	-1341	-17	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGCTACAAAATAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	42596987	42582431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42583844_42585936_42586049_42586383_42586521_42587139_42587256_42588315_42588560_42590611_42590775_42591625_42591794_42592293_42592449_42592570_42592755_42593245_42593466_42593684_42593724_42595008_42595215_42595992_42596172_42596690
ENSMUSG00000025188.16_0	chr19	-	2847	20	FSM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTTGTGTGTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	42768417	42743543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUSG00000025188.16_21	chr19	-	2640	19	FSM	ENSMUSG00000025188.16	ENSMUST00000026194.15	2647	19	3	4	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCAAGCCTGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	42767083	42743638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766678_42766992
ENSMUSG00000025188.16_23	chr19	-	2937	20	FSM	ENSMUSG00000025188.16	ENSMUST00000160455.8	2952	20	13	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTCAAGCCTGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	42768402	42743638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768176
ENSMUSG00000025188.16_3	chr19	-	2769	19	ISM	ENSMUSG00000025188.16	ENSMUST00000162004.8	2847	20	1338	7	7	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTATGTATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	42767079	42743550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_42744236_42744696_42744780_42746231_42746346_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755148_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992
ENSMUSG00000025188.16_39	chr19	-	3186	18	FSM	ENSMUSG00000025188.16	ENSMUST00000069298.13	3196	18	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAAGCACTTCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	42768403	42746528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42747747_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992_42767086_42768352
ENSMUSG00000025188.16_42	chr19	-	3136	17	ISM	ENSMUSG00000025188.16	ENSMUST00000069298.13	3196	18	1318	9	0	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAAGCACTTCCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	42767086	42746528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_42747747_42748144_42748290_42748802_42748869_42748948_42749084_42749450_42749513_42750534_42750715_42750831_42751000_42752233_42752284_42754351_42754422_42754568_42754656_42755124_42755273_42755556_42755718_42758044_42758154_42759192_42759336_42759555_42759694_42766560_42766723_42766992
ENSMUSG00000025190.14_0	chr19	-	2036	9	FSM	ENSMUSG00000025190.14	ENSMUST00000026196.14	2058	9	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAAGTGAAATGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	43513035	43488203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43488997_43491346_43491490_43492960_43493127_43493214_43493366_43495360_43495466_43495760_43495874_43496308_43496433_43504119_43504302_43512776
ENSMUSG00000025192.14_0	chr19	+	5897	13	FSM	ENSMUSG00000025192.14	ENSMUST00000081079.6	5911	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGTAAAATGGAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	43678117	43722129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_43678344_43678617_43678721_43679456_43679640_43692637_43692844_43693318_43693470_43700173_43700278_43704712_43704770_43705888_43706023_43710187_43710355_43713652_43713978_43715281_43715368_43716428_43716591_43718136
ENSMUSG00000025193.15_0	chr19	+	1277	9	FSM	ENSMUSG00000025193.15	ENSMUST00000026199.14	1298	9	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATTGTGTTATAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	43741451	43757066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751341_43751446_43753398_43753427_43755639_43755746_43756613
ENSMUSG00000025193.15_1	chr19	+	1224	9	FSM	ENSMUSG00000025193.15	ENSMUST00000112047.10	1233	9	3	6	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGTTATAGTCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	43741539	43757071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_43741660_43744058_43744131_43747166_43747227_43748288_43748499_43749127_43749164_43751311_43751446_43753398_43753427_43755639_43755746_43756613
ENSMUSG00000025195.10_0	chr19	-	3896	14	FSM	ENSMUSG00000025195.10	ENSMUST00000212592.2	3901	14	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGACCATGAGTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	43868206	43835264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858027_43858046_43858600_43858749_43862596_43862697_43863265_43863460_43868051
ENSMUSG00000025195.10_2	chr19	-	2629	12	FSM	ENSMUSG00000025195.10	ENST00000543621.6	2645	12	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTGAAGTGGGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	43863451	43836365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43836718_43838214_43838766_43840662_43840862_43842571_43842752_43843235_43843569_43844940_43845070_43855027_43855133_43855965_43856097_43857243_43857444_43858585_43858749_43862596_43862697_43863265
ENSMUSG00000025196.5_0	chr19	-	1799	9	FSM	ENSMUSG00000025196.5	ENSMUST00000026210.5	1828	9	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGGTGCCACTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	43974971	43944750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43945076_43948424_43948544_43952169_43952270_43954613_43954754_43956891_43957004_43958440_43958624_43962371_43962528_43969241_43969439_43974504
ENSMUSG00000025198.17_0	chr19	-	3141	11	FSM	ENSMUSG00000025198.17	ENSMUST00000170801.8	3172	11	24	7	24	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGATTGTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44057941	44023389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710
ENSMUSG00000025198.17_1	chr19	-	3212	12	FSM	ENSMUSG00000025198.17	ENSMUST00000071698.13	3228	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGATTGTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44058205	44023389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058027
ENSMUSG00000025198.17_2	chr19	-	3122	12	FSM	ENSMUSG00000025198.17	ENSMUST00000112028.10	3136	12	7	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGATTGTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44058217	44023389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44025588_44027611_44027692_44029185_44029276_44036073_44036166_44037560_44037620_44044560_44044635_44047489_44047616_44050281_44050344_44051457_44051505_44056038_44056121_44057710_44057835_44058129
ENSMUSG00000025199.17_0	chr19	-	3477	21	FSM	ENSMUSG00000025199.17	ENSMUST00000026217.11	3502	21	18	7	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	44095901	44061780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44062980_44063869_44063970_44065684_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUSG00000025199.17_1	chr19	-	3462	21	FSM	ENSMUSG00000025199.17	ENSMUST00000119591.2	3481	21	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTATTTTGAATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	44095903	44061780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44062980_44063869_44063970_44065701_44065819_44066731_44066880_44067327_44067425_44070384_44070435_44071024_44071135_44072855_44072918_44075346_44075499_44076354_44076479_44077113_44077217_44079371_44079567_44084662_44084799_44085347_44085456_44085641_44085767_44085880_44085971_44087023_44087113_44088588_44088659_44090175_44090291_44092096_44092192_44095726
ENSMUSG00000025200.8_0	chr19	-	3560	14	FSM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAAACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	44124305	44097086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438_44121524_44124204
ENSMUSG00000025200.8_3	chr19	-	3463	13	ISM	ENSMUSG00000025200.8	ENSMUST00000026218.7	3581	14	2792	7	2792	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCAAACTCACTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	44121523	44097082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_44099100_44101387_44101486_44102112_44102233_44102962_44103173_44109311_44109392_44110287_44110400_44111582_44111724_44113246_44113332_44115804_44115924_44117636_44117852_44119850_44119953_44120524_44120604_44121438
ENSMUSG00000025203.7_0	chr19	+	5438	6	FSM	ENSMUSG00000025203.7	ENSMUST00000026221.7	5455	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAAAATGTCTCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44282120	44295294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44282851_44283342_44283626_44286478_44286610_44288047_44288254_44289650_44289884_44291439
ENSMUSG00000025204.11_1	chr19	-	2125	5	FSM	ENSMUSG00000025204.11	ENSMUST00000171415.8	2142	5	13	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGGTTTCTGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	44543852	44537014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44538660_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUSG00000025204.11_10	chr19	-	674	5	FSM	ENSMUSG00000025204.11	ENST00000370320.4	682	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGTCTTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	44543843	44538875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44539079_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUSG00000025204.11_4	chr19	-	670	5	FSM	ENSMUSG00000025204.11	ENSMUST00000026222.11	680	5	10	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCTTTCTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	44543869	44538678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44538852_44541136_44541293_44542107_44542208_44543369_44543497_44543755
ENSMUSG00000025207.17_0	chr19	+	2577	14	FSM	ENSMUSG00000025207.17	ENST00000517724.5	2588	14	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGGCTCCCATCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	44980768	44991479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44990785
ENSMUSG00000025207.17_20	chr19	+	3970	14	FSM	ENSMUSG00000025207.17	ENST00000210633.3	3984	14	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	44980908	44991833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44981078_44981172_44981322_44981558_44981622_44984907_44985007_44985118_44985213_44985358_44985473_44985730_44985895_44985967_44986138_44986402_44986548_44986670_44986894_44987109_44987226_44987316_44987492_44987617_44987680_44989606
ENSMUSG00000025207.17_34	chr19	+	1087	2	FSM	ENSMUSG00000025207.17	ENST00000613292.1	1087	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	44990618	44991833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44990658_44990785
ENSMUSG00000025207.17_35	chr19	+	1033	1	ISM	ENSMUSG00000025207.17	ENSMUST00000026225.15	4548	15	13261	3	182	0	mono-exon	FALSE	NA	NA	NA	NA	NA	409	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTTGAGTGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	44990800	44991833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_44990800_44991800
ENSMUSG00000025208.10_0	chr19	-	1381	3	FSM	ENSMUSG00000025208.10	ENSMUST00000097715.4	1398	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGCCAGAAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44994871	44993274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44994380_44994501_44994609_44994702
ENSMUSG00000025209.6_1	chr19	+	3471	5	FSM	ENSMUSG00000025209.6	ENSMUST00000026227.3	3488	5	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGCGTTTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	44995013	45001201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44996815_44997718_44997960_44998570_44998679_44998856_44998999_45000022
ENSMUSG00000025209.6_2	chr19	+	614	4	FSM	ENSMUSG00000025209.6	ENST00000476766.5	634	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAAGCCCGACTCAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44997789	45000187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44997960_44998570_44998679_44998856_44999028_45000022
ENSMUSG00000025212.18_0	chr19	+	2844	10	FSM	ENSMUSG00000025212.18	ENSMUST00000111954.11	2867	10	23	0	23	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATCTTCAGTTATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	45036037	45044822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUSG00000025212.18_1	chr19	+	2854	11	FSM	ENSMUSG00000025212.18	ENSMUST00000062213.13	2867	11	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATCTTCAGTTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	45036125	45044821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45036330_45037542_45037707_45038182_45038354_45038666_45038766_45039088_45039165_45039314_45039401_45040534_45040663_45040849_45040900_45042108_45042159_45042740_45042789_45043043
ENSMUSG00000025213.12_0	chr19	+	1596	6	FSM	ENSMUSG00000025213.12	ENSMUST00000111948.8	1625	6	16	13	16	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAACCGAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	45063695	45067715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45063958_45064633_45064676_45065079_45065653_45066734_45066896_45066999_45067148_45067305
ENSMUSG00000025213.12_3	chr19	+	1355	5	FSM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAAACAAACCGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	45064587	45067713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45064676_45065102_45065653_45066734_45066896_45066999_45067148_45067305
ENSMUSG00000025213.12_4	chr19	+	1261	4	ISM	ENSMUSG00000025213.12	ENSMUST00000026234.5	1380	5	523	23	523	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATATATAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45065100	45067705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_45065653_45066734_45066896_45066999_45067148_45067305
ENSMUSG00000025215.11_0	chr19	+	1701	3	FSM	ENSMUSG00000025215.11	ENST00000467928.2	1714	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATCAGTGCACACACA	NA	NA	NA	NA	NA	NA	NA	NA	45139127	45145005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45139932_45141954_45142157_45144310
ENSMUSG00000025217.16_0	chr19	+	2961	15	FSM	ENSMUSG00000025217.16	ENSMUST00000065601.13	2978	15	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCACTCTGCTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	45352201	45518447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45352326_45411571_45411680_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_2	chr19	+	2064	14	FSM	ENSMUSG00000025217.16	ENSMUST00000111936.4	2064	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATCTCTCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45352271	45517728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45352326_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_3	chr19	+	2178	14	FSM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATCTCTCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	45433962	45517732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45434127_45444971_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025217.16_4	chr19	+	2007	13	ISM	ENSMUSG00000025217.16	ENSMUST00000224478.2	2194	14	11028	4	11028	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGAATCTCTCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45444974	45517728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_45445050_45459453_45459544_45491370_45491603_45496122_45496310_45501083_45501181_45501825_45501964_45502446_45502566_45504296_45504547_45505453_45505573_45507247_45507359_45507880_45507960_45515702_45515896_45517411
ENSMUSG00000025218.7_0	chr19	-	2315	9	FSM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAATTGCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45548970	45540722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018_45548156_45548924
ENSMUSG00000025218.7_1	chr19	-	2264	8	ISM	ENSMUSG00000025218.7	ENSMUST00000026239.7	2324	9	820	9	820	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAATTGCCTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	45548150	45540722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_45541610_45541947_45542117_45543529_45543659_45544360_45544535_45546153_45546472_45546694_45546855_45547063_45547359_45548018
ENSMUSG00000025220.9_0	chr19	-	5044	16	FSM	ENSMUSG00000025220.9	ENSMUST00000026243.5	5057	16	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAATGTGTGCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45771984	45738704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45740720_45743045_45743206_45746343_45746537_45746787_45746874_45749542_45749648_45750623_45750710_45753888_45754064_45755832_45756447_45758489_45758649_45760120_45760406_45762100_45762200_45764486_45764659_45765325_45765457_45767025_45767124_45767470_45767523_45771370
ENSMUSG00000025221.17_0	chr19	-	679	8	FSM	ENSMUSG00000025221.17	ENST00000642874.1	693	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCTCCCCAGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45791909	45782114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018_45784144_45791814
ENSMUSG00000025221.17_1	chr19	-	586	7	ISM	ENSMUSG00000025221.17	ENST00000642874.1	693	8	7772	6	7772	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGCTCCCCAGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45784145	45782114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_45782157_45782439_45782503_45782637_45782743_45782918_45783027_45783178_45783250_45783416_45783487_45784018
ENSMUSG00000025223.16_0	chr19	-	2258	11	FSM	ENSMUSG00000025223.16	ENSMUST00000056931.14	2295	11	15	22	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATGTAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46028045	46021054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46021781_46022470_46022620_46022827_46022952_46023049_46023134_46023262_46023386_46023859_46024033_46024173_46024277_46024362_46024439_46024545_46024591_46024701_46024805_46027493
ENSMUSG00000025224.17_15	chr19	+	6384	40	FSM	ENSMUSG00000025224.17	ENST00000677240.1	6405	40	13	8	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTTAGTACCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	46140981	46274928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249148_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_2	chr19	+	6429	40	FSM	ENSMUSG00000025224.17	ENSMUST00000026254.14	6450	40	12	9	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTCATTTCCTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	46140959	46274940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253807_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_21	chr19	+	6091	38	FSM	ENSMUSG00000025224.17	ENST00000677618.1	6108	38	9	8	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCTTAGTACCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	46140977	46274928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269171_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025224.17_50	chr19	+	6468	41	FSM	ENSMUSG00000025224.17	ENST00000674034.1	6486	41	11	7	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAACTCATTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46140990	46274937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46141232_46151958_46152065_46159095_46159163_46234527_46234660_46240552_46240672_46242425_46242535_46242995_46243057_46244091_46244147_46244846_46244922_46247542_46247691_46248011_46248236_46249151_46249318_46250059_46250272_46250872_46250972_46253217_46253413_46253616_46253805_46254025_46254167_46254463_46254553_46255641_46255845_46256431_46256556_46256829_46256956_46257217_46257301_46258183_46258421_46258696_46258791_46259112_46259290_46259993_46260059_46260145_46260270_46260424_46260497_46260613_46260709_46260939_46261094_46267648_46267875_46268350_46268512_46268615_46268863_46268976_46269183_46271473_46271625_46271758_46271890_46272060_46272163_46272443_46272558_46272688_46272870_46273143_46273273_46274098
ENSMUSG00000025225.16_0	chr19	+	3801	22	FSM	ENSMUSG00000025225.16	ENSMUST00000237330.2	3846	22	30	15	30	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACGAAAAAAAAAAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	46292788	46300809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019
ENSMUSG00000025225.16_11	chr19	+	3103	22	FSM	ENSMUSG00000025225.16	ENSMUST00000111881.4	3141	22	33	5	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAACCCCAATGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	46294167	46300461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ENSMUSG00000025225.16_18	chr19	+	2649	19	FSM	ENSMUSG00000025225.16	ENST00000369966.8	2665	19	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGGGGAAGACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	46295213	46300427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300208
ENSMUSG00000025225.16_3	chr19	+	2972	23	FSM	ENSMUSG00000025225.16	ENSMUST00000073116.13	2979	23	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTACAGCAACCCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	46293184	46300456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46293260_46294368_46294464_46294721_46294804_46294924_46294966_46295209_46295309_46295380_46295533_46295802_46295910_46295998_46296158_46296394_46296500_46296611_46296698_46296783_46296923_46297067_46297194_46297303_46297514_46297593_46297736_46298093_46298209_46298281_46298496_46298646_46298817_46298935_46299039_46299162_46299315_46299447_46299518_46299720_46299894_46300019_46300132_46300211
ENSMUSG00000025226.12_0	chr19	+	1332	4	FSM	ENSMUSG00000025226.12	ENSMUST00000026256.9	1348	4	16	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCGTGGTGCATAGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	46316638	46318885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUSG00000025226.12_1	chr19	+	1237	5	FSM	ENSMUSG00000025226.12	ENSMUST00000177667.2	1243	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTGGTGCATAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46316631	46318884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46316741_46316841_46316966_46317113_46317268_46317526_46318033_46318540
ENSMUSG00000025227.15_0	chr19	+	398	3	FSM	ENSMUSG00000025227.15	ENST00000369931.3	422	3	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTATGGAGAATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	46354797	46356824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46354993_46355648_46355732_46356704
ENSMUSG00000025228.6_0	chr19	-	2736	11	FSM	ENSMUSG00000025228.6	ENSMUST00000040270.6	2757	11	11	10	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTACATCAGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	46384175	46365259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46366909_46367046_46367088_46367851_46367914_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ENSMUSG00000025228.6_5	chr19	-	2671	10	FSM	ENSMUSG00000025228.6	ENSMUST00000237742.2	2683	10	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGGTACATCAGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	46384172	46365259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46366909_46367046_46367088_46368020_46368196_46368687_46368781_46369355_46369573_46370732_46370858_46372658_46372785_46373451_46373528_46375890_46375956_46384068
ENSMUSG00000025229.16_0	chr19	-	1362	4	FSM	ENSMUSG00000025229.16	ENSMUST00000026259.16	1380	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTCAAAGGCCTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	46136756	46124132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46125045_46125421_46125625_46125803_46125934_46136639
ENSMUSG00000025231.18_0	chr19	+	4511	12	FSM	ENSMUSG00000025231.18	ENSMUST00000039922.13	4522	12	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCCTGAGTTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	46385338	46477236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ENSMUSG00000025231.18_2	chr19	+	1732	12	FSM	ENSMUSG00000025231.18	ENSMUST00000111867.9	1747	12	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGACTGCAGAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	46385371	46474487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441597_46441755_46443173_46443286_46462010_46462146_46463946_46464086_46472038_46472108_46474293
ENSMUSG00000025231.18_3	chr19	+	2665	10	FSM	ENSMUSG00000025231.18	ENSMUST00000118440.3	2681	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTAGATTTCGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46385473	46465386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46385724_46389562_46389698_46413437_46413575_46438267_46438411_46439017_46439104_46439329_46439403_46441600_46441755_46443173_46443286_46462010_46462146_46463946
ENSMUSG00000025232.9_0	chr9	+	1986	14	FSM	ENSMUSG00000025232.9	ENSMUST00000026262.8	1996	14	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTGGGTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59446830	59472390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59447260_59461415_59461509_59462621_59462688_59464154_59464202_59464570_59464682_59465316_59465419_59466606_59466740_59468179_59468361_59469225_59469310_59469578_59469652_59470149_59470334_59470506_59470598_59471165_59471271_59472103
ENSMUSG00000025234.12_0	chr9	-	6940	14	FSM	ENSMUSG00000025234.12	ENSMUST00000171975.8	6971	14	20	11	20	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATCACTATACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	59393877	59295551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_59300662_59302160_59302274_59303633_59303895_59310650_59310709_59313007_59313139_59315158_59315231_59315657_59315701_59319707_59319815_59322052_59322120_59333405_59333462_59333896_59333990_59344053_59344199_59361684_59361753_59393261
ENSMUSG00000025235.9_0	chr9	-	2500	16	FSM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	NA	NA	NA	NA	NA	NA	NA	59260785	59229284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082_59253135_59260692
ENSMUSG00000025235.9_4	chr9	-	2408	15	ISM	ENSMUSG00000025235.9	ENSMUST00000026265.8	2518	16	7656	12	7656	-12	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACTATGATC	NA	NA	NA	NA	NA	NA	NA	NA	59253135	59229284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_59230266_59230670_59230873_59231319_59231462_59232072_59232143_59234469_59234642_59234738_59234892_59235862_59235932_59237700_59237756_59240762_59240891_59243646_59243701_59247093_59247167_59248369_59248482_59249770_59249835_59251342_59251423_59253082
ENSMUSG00000025236.12_0	chr9	+	2470	7	FSM	ENSMUSG00000025236.12	ENSMUST00000217570.2	2484	7	11	3	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATCCTAAGTCTAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	59198851	59223479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222013
ENSMUSG00000025236.12_2	chr9	+	2449	7	FSM	ENSMUSG00000025236.12	ENSMUST00000026266.9	2464	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCAGGATCCTAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	59198863	59223473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59199150_59204808_59205035_59210771_59210835_59217510_59217632_59220322_59220520_59221035_59221135_59222016
ENSMUSG00000025237.17_0	chr9	+	2687	24	FSM	ENSMUSG00000025237.17	ENSMUST00000026267.16	2709	24	16	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGATATGATCACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59524582	59557562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538113_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ENSMUSG00000025237.17_5	chr9	+	2606	24	FSM	ENSMUSG00000025237.17	ENSMUST00000050483.15	2631	24	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAATAAAATGGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	59524576	59557535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59524692_59525750_59525991_59529631_59529827_59530405_59530484_59531200_59531296_59531655_59531717_59531946_59532038_59532605_59532673_59535801_59535952_59537901_59538053_59538622_59538677_59540198_59540295_59540794_59540888_59542138_59542265_59543952_59544019_59544916_59544985_59547046_59547096_59547322_59547433_59548306_59548380_59549023_59549094_59556112_59556193_59556572_59556637_59556801_59556887_59557206
ENSMUSG00000025239.4_0	chr9	+	4837	8	FSM	ENSMUSG00000025239.4	ENSMUST00000026269.4	4848	8	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCCCAAGACTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	123307777	123350613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_123309687_123329195_123329298_123339572_123339641_123340280_123340344_123345839_123345971_123346427_123346480_123347160_123347230_123348170
ENSMUSG00000025240.11_0	chr9	+	3538	20	FSM	ENSMUSG00000025240.11	ENSMUST00000026270.9	3558	20	18	2	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123358841	123421663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_123358987_123371408_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025240.11_15	chr9	+	3387	19	ISM	ENSMUSG00000025240.11	ENSMUST00000238984.2	3433	20	12468	0	12468	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCGCTGTTGGTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123371414	123421663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_123371507_123376048_123376124_123377926_123378055_123381732_123381883_123388289_123388350_123389630_123389665_123395455_123395558_123397988_123398075_123399013_123399101_123399561_123399631_123406041_123406122_123408013_123408113_123411312_123411452_123414151_123414222_123414349_123414423_123415408_123415503_123415626_123415720_123416609_123416668_123419865
ENSMUSG00000025241.17_0	chr9	-	7935	19	FSM	ENSMUSG00000025241.17	ENSMUST00000084715.14	7949	19	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCATTGTCTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	123680716	123618568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123674217_123674335_123680477
ENSMUSG00000025241.17_3	chr9	-	7677	18	FSM	ENSMUSG00000025241.17	ENSMUST00000167595.9	7692	18	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAGTAGCATTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	123680949	123618574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630383_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936_123668063_123669606_123669714_123672523_123672674_123680845
ENSMUSG00000025241.17_6	chr9	-	4258	15	FSM	ENSMUSG00000025241.17	ENST00000535325.5	4279	15	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACATGAACACGCACA	NA	NA	NA	NA	NA	NA	NA	NA	123668050	123621670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123621815_123623789_123623900_123626581_123626793_123630286_123630433_123648111_123648257_123651382_123651595_123652242_123652393_123654570_123654739_123655610_123655730_123656149_123656243_123657240_123659545_123660351_123660443_123662162_123662307_123663857_123663965_123667936
ENSMUSG00000025243.18_0	chr9	-	6302	11	FSM	ENSMUSG00000025243.18	ENSMUST00000026273.11	6307	11	2	3	2	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTGTTGATATTAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	123461628	123419867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123424208_123425107_123425274_123426291_123426452_123427475_123427681_123432791_123432955_123433772_123434015_123436589_123436701_123438063_123438292_123439344_123439437_123441053_123441195_123461174
ENSMUSG00000025245.15_0	chr9	-	4052	10	FSM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAGAAGGAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	123546684	123526088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364_123544490_123546590
ENSMUSG00000025245.15_3	chr9	-	3959	9	ISM	ENSMUSG00000025245.15	ENSMUST00000026274.14	4070	10	2200	12	2200	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAAGAAGGAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	123544490	123526088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_123529169_123529934_123530039_123531189_123531367_123536973_123537052_123537137_123537204_123538618_123538691_123540100_123540162_123541494_123541690_123544364
ENSMUSG00000025246.14_0	chrX	+	3320	16	FSM	ENSMUSG00000025246.14	ENST00000645353.2	3332	16	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTCTAATTACCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	76554536	76704400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_76554876_76588808_76589000_76684902_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUSG00000025246.14_1	chrX	+	5219	16	FSM	ENSMUSG00000025246.14	ENSMUST00000088217.12	5234	16	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAGAGAACATAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	76554627	76706583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_76554876_76677151_76677247_76684999_76685114_76687016_76687163_76689813_76690076_76691397_76691531_76691857_76692000_76692259_76692324_76692428_76692527_76693478_76693540_76693974_76694097_76696369_76696445_76696819_76696948_76699011_76699178_76702306_76702409_76703320
ENSMUSG00000025255.19_0	chr3	+	11266	11	FSM	ENSMUSG00000025255.19	ENSMUST00000175866.8	11287	11	16	5	-12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCCGTGCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5283601	5478220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_5283988_5306729_5309360_5310202_5310706_5394494_5394727_5447618_5447688_5455395_5455513_5461633_5461762_5461959_5462161_5462737_5462856_5463720_5469124_5476741
ENSMUSG00000025255.19_1	chr3	+	13855	11	FSM	ENSMUSG00000025255.19	ENSMUST00000026284.13	13874	11	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATATTTACTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	5283625	5480908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_5283988_5306729_5309360_5310280_5310706_5394494_5394727_5447618_5447688_5455395_5455513_5461630_5461762_5461959_5462161_5462737_5462856_5463720_5469124_5476741
ENSMUSG00000025255.19_3	chr3	+	13482	10	FSM	ENSMUSG00000025255.19	ENSMUST00000176383.3	13500	10	12	6	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATATTTACTCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5306743	5480911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_5309360_5310280_5310706_5394494_5394727_5447618_5447688_5455395_5455513_5461630_5461762_5461959_5462161_5462737_5462856_5463720_5469124_5476741
ENSMUSG00000025257.6_0	chrX	-	1485	8	FSM	ENSMUSG00000025257.6	ENSMUST00000026288.5	1508	8	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAACTGTGTGTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	150799274	150787583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_150787807_150787914_150788310_150788734_150788854_150790211_150790557_150790742_150790825_150792520_150792638_150798776_150798865_150799158
ENSMUSG00000025260.11_0	chrX	+	945	6	FSM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCCAAGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	150784847	150787428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150784931_150785273_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUSG00000025260.11_6	chrX	+	864	5	ISM	ENSMUSG00000025260.11	ENSMUST00000026289.10	962	6	431	10	0	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCCAAGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	150785271	150787428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_150785439_150786356_150786522_150786648_150786778_150786857_150786967_150787134
ENSMUSG00000025260.11_7	chrX	+	669	4	FSM	ENSMUSG00000025260.11	ENST00000375298.4	682	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATTTGAAGGAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	150785284	150787355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150785439_150786356_150786522_150786648_150786778_150787134
ENSMUSG00000025261.19_141	chrX	+	13806	81	FSM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGTTATTTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	150618243	150718078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681442_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUSG00000025261.19_208	chrX	+	13753	80	ISM	ENSMUSG00000025261.19	ENST00000612484.4	13806	81	4816	0	4816	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGTTATTTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	150623059	150718078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659877_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681442_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUSG00000025261.19_4	chrX	+	13993	82	FSM	ENSMUSG00000025261.19	ENST00000262854.11	14000	82	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGTTATTTAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	150589720	150718078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150589857_150618219_150618289_150623051_150623151_150623772_150623980_150625998_150626152_150633712_150633776_150635470_150635549_150636394_150636443_150636519_150636589_150637137_150637238_150639081_150639183_150639468_150639620_150639712_150639841_150640455_150640597_150640803_150640910_150643162_150643265_150643664_150643746_150645293_150645401_150645647_150645826_150646868_150646961_150647557_150647770_150653454_150653513_150654475_150654653_150657528_150657775_150659290_150659425_150659808_150659904_150661713_150661906_150663495_150663713_150664073_150664197_150665487_150665726_150666074_150666306_150668577_150668701_150669078_150669175_150669739_150670010_150671379_150671533_150672664_150672793_150672985_150673068_150673725_150673903_150674012_150674173_150674735_150675095_150676818_150677015_150677916_150678085_150679558_150679705_150680182_150680250_150681442_150681658_150683896_150684109_150684494_150684678_150686824_150686998_150687349_150687499_150688351_150688428_150689260_150689360_150689946_150690081_150690271_150690441_150691723_150691953_150692404_150692584_150692855_150692946_150693096_150693252_150695204_150695251_150697141_150697430_150698587_150698844_150699036_150699168_150699821_150700037_150700114_150700404_150700546_150700650_150701376_150701924_150702571_150703182_150704041_150704158_150704257_150704415_150705327_150705461_150705691_150705895_150706474_150706603_150707657_150707758_150710626_150710786_150711148_150711395_150711758_150711877_150712339_150712481_150713058_150713347_150713459_150713566_150714734_150714853_150715544_150715727_150715935_150716127_150717276
ENSMUSG00000025262.9_0	chrX	+	5451	16	FSM	ENSMUSG00000025262.9	ENSMUST00000073364.6	5463	16	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATGAGAAGAATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	150127173	150254829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150127933_150159743_150159991_150164906_150164990_150182670_150182800_150211912_150212013_150212832_150212910_150213386_150213665_150214465_150214740_150215597_150215770_150219140_150219391_150240717_150240833_150246964_150247175_150248278_150248481_150250295_150250435_150250794_150250853_150252471
ENSMUSG00000025264.13_0	chrX	-	3781	5	FSM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	7	8	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCGTACACTCATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	149879532	149870097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUSG00000025264.13_2	chrX	-	3797	5	FSM	ENSMUSG00000025264.13	ENSMUST00000026295.10	3804	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCATTTTCCTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	149879532	149870090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149873411_149873591_149873778_149874671_149874764_149879160_149879252_149879424
ENSMUSG00000025264.13_4	chrX	-	3677	4	ISM	ENSMUSG00000025264.13	ENSMUST00000112683.9	3796	5	284	8	284	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCGTACACTCATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	149879255	149870097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_149873411_149873600_149873778_149874671_149874764_149879160
ENSMUSG00000025265.15_0	chrX	+	3231	18	FSM	ENSMUSG00000025265.15	ENSMUST00000112685.8	3240	18	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTAACTTTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	149829145	149872508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_149829197_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUSG00000025265.15_1	chrX	+	3980	18	FSM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTAACTTTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	149830177	149872508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_149830978_149849176_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUSG00000025265.15_3	chrX	+	3180	17	ISM	ENSMUSG00000025265.15	ENSMUST00000026296.8	4001	18	19011	9	19011	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAGTAACTTTCAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	149849176	149872508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_149849351_149849705_149849884_149850008_149850448_149851872_149851963_149852637_149852787_149855168_149855326_149855429_149855569_149861954_149862014_149862153_149862301_149862874_149862968_149863112_149863193_149868626_149868658_149869109_149869212_149869515_149869642_149869815_149869978_149870963_149871108_149871598
ENSMUSG00000025266.12_0	chrX	-	4844	16	FSM	ENSMUSG00000025266.12	ENSMUST00000112691.9	4869	16	18	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	149800300	149766143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800196
ENSMUSG00000025266.12_1	chrX	-	4853	16	FSM	ENSMUSG00000025266.12	ENSMUST00000026297.12	4865	16	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTGTGTGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	149800313	149766143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787240_149787282_149797016_149797086_149800200
ENSMUSG00000025266.12_10	chrX	-	1467	11	FSM	ENSMUSG00000025266.12	ENST00000674420.1	1477	11	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGGGTACTTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	149786632	149770836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149786529
ENSMUSG00000025266.12_13	chrX	-	1807	15	FSM	ENSMUSG00000025266.12	ENST00000674498.1	1815	15	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGGGTACTTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	149800287	149770836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016_149797086_149800200
ENSMUSG00000025266.12_14	chrX	-	1720	14	ISM	ENSMUSG00000025266.12	ENST00000674311.1	1849	15	3129	2	3129	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGGGTACTTGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	149797085	149770836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016
ENSMUSG00000025266.12_5	chrX	-	1923	16	FSM	ENSMUSG00000025266.12	ENST00000360845.3	1934	16	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGCAGCTGACCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	149800206	149769104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149769183_149770834_149771058_149774131_149774260_149776644_149776782_149777006_149777150_149777243_149777419_149778006_149778095_149780181_149780327_149782692_149782800_149783598_149783735_149784033_149784118_149785169_149785287_149786529_149786638_149787219_149787282_149797016_149797086_149800083
ENSMUSG00000025268.16_0	chrX	-	2160	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112699.9	2183	13	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAACAATCGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	149597330	149589377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149597224
ENSMUSG00000025268.16_2	chrX	-	2016	12	ISM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	968	1	-24	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	149595735	149589417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666
ENSMUSG00000025268.16_6	chrX	-	2101	13	FSM	ENSMUSG00000025268.16	ENSMUST00000112700.8	2107	13	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTATTGCCATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	149596698	149589417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149589552_149589705_149590178_149590567_149590683_149591716_149591780_149592105_149592149_149592242_149592323_149592698_149592794_149593339_149593420_149593676_149593741_149593869_149594179_149594818_149595311_149595666_149595734_149596611
ENSMUSG00000025269.17_0	chrX	-	4740	7	FSM	ENSMUSG00000025269.17	ENSMUST00000112720.8	4742	7	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTGGATCAGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	149372839	149351858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918_149371275_149372757
ENSMUSG00000025269.17_1	chrX	-	1867	6	FSM	ENSMUSG00000025269.17	ENSMUST00000026303.16	1884	6	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACCATGTTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	149371131	149354506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369042_149370038_149370123_149370918
ENSMUSG00000025269.17_2	chrX	-	1848	6	FSM	ENSMUSG00000025269.17	ENSMUST00000112721.10	1852	6	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGACCATGTTGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	149371091	149354506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149355679_149367460_149367531_149368196_149368344_149368860_149369063_149370038_149370123_149370918
ENSMUSG00000025271.14_0	chrX	+	1723	14	FSM	ENSMUSG00000025271.14	ENSMUST00000080884.11	1739	14	2	14	2	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAAAAGTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	149372918	149426860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_149373081_149391581_149391708_149394001_149394096_149395908_149395976_149396872_149396948_149403764_149403822_149405077_149405200_149408152_149408361_149411735_149411883_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025271.14_2	chrX	+	1070	9	FSM	ENSMUSG00000025271.14	ENST00000374992.6	1099	9	17	12	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATAAAGACATTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	149377619	149426829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_149377771_149391581_149391725_149395908_149395976_149396872_149396948_149417518_149417624_149422576_149422707_149424910_149424974_149426164_149426230_149426558
ENSMUSG00000025277.15_0	chr14	-	2220	9	FSM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTAGGCTGGCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	14466871	14413015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383_14441537_14466809
ENSMUSG00000025277.15_1	chr14	-	2153	8	ISM	ENSMUSG00000025277.15	ENSMUST00000166497.9	2226	9	25340	6	25323	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTAGGCTGGCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	14441531	14413015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14441383
ENSMUSG00000025277.15_4	chr14	-	1895	7	ISM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	36843	4	36843	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTCTGTGAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	14430011	14413111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868
ENSMUSG00000025277.15_5	chr14	-	1953	8	FSM	ENSMUSG00000025277.15	ENSMUST00000225234.2	1958	8	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAATTCTGTGAATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	14466853	14413111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14414303_14419864_14419966_14420144_14420200_14424147_14424306_14426946_14427080_14428540_14428655_14429868_14430026_14466809
ENSMUSG00000025278.10_1	chr14	-	9084	46	FSM	ENSMUSG00000025278.10	ENSMUST00000052678.9	9100	46	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACGCTCCCTGTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	14651805	14518189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025278.10_10	chr14	-	7823	45	FSM	ENSMUSG00000025278.10	ENST00000682871.1	7841	45	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAACCTTGCCGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	14651652	14519174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14546215_14546319_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14555252_14555343_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025278.10_27	chr14	-	7186	43	FSM	ENSMUSG00000025278.10	ENST00000493452.5	7197	43	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATCTGATAGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	14599985	14519282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895
ENSMUSG00000025278.10_28	chr14	-	7936	47	FSM	ENSMUSG00000025278.10	ENST00000490882.5	7944	47	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATCTGATAGCCAATG	NA	NA	NA	NA	NA	NA	NA	NA	14651660	14519282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14519469_14521125_14521330_14523759_14523979_14527551_14527729_14530593_14530727_14533723_14533840_14535071_14535210_14535792_14536060_14538626_14538750_14538857_14539011_14539810_14540015_14540613_14540773_14542253_14542428_14543261_14543391_14545459_14545601_14546215_14546319_14547026_14547099_14550415_14550664_14552389_14552580_14553669_14553827_14554388_14554513_14555252_14555343_14556650_14556819_14560003_14560165_14561088_14561252_14562446_14562621_14563797_14564396_14565048_14565312_14567771_14567890_14573217_14573388_14573592_14573684_14575085_14575247_14575515_14575640_14575885_14576030_14576786_14576901_14577499_14577694_14578906_14579044_14580511_14580639_14582098_14582237_14585025_14585224_14585850_14586014_14587488_14587567_14588071_14588191_14596280_14596429_14599895_14599994_14601987_14602237_14651329
ENSMUSG00000025280.9_0	chr14	-	4672	31	FSM	ENSMUSG00000025280.9	ENSMUST00000026322.9	4687	31	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATATTAAGTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24537108	24498766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_24499291_24500762_24500896_24502260_24502393_24502578_24502744_24503238_24503404_24504637_24504731_24504922_24505017_24505931_24506103_24507084_24507168_24507286_24507374_24510031_24510146_24511767_24511939_24513621_24513760_24514319_24514439_24515328_24515441_24517002_24517176_24519332_24519498_24520601_24520741_24520887_24521016_24521805_24521876_24524240_24524382_24525807_24525950_24526080_24526185_24529173_24529311_24529426_24529590_24529703_24529944_24532447_24532603_24532854_24533027_24534185_24534324_24534454_24534591_24536940
ENSMUSG00000025283.16_0	chrX	-	1142	6	FSM	ENSMUSG00000025283.16	ENSMUST00000026318.15	1162	6	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTCAGCCTGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	153999434	153996136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998596_153998681_153998780_153998833_153999098
ENSMUSG00000025283.16_3	chrX	-	790	5	FSM	ENSMUSG00000025283.16	ENST00000379254.5	815	5	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTATATAAGAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	153999286	153996256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_153996664_153996892_153996934_153997028_153997131_153998780_153998833_153999098
ENSMUSG00000025287.16_0	chrX	+	1735	15	FSM	ENSMUSG00000025287.16	ENSMUST00000026324.10	1752	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACGATTGTGAGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	154045448	154080643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_154045671_154052654_154052750_154054947_154054994_154055967_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154069284_154069362_154076904_154076973_154078158_154078271_154078417_154078509_154078678_154078765_154079320_154079409_154079576_154079728_154080341
ENSMUSG00000025287.16_10	chrX	+	471	5	FSM	ENSMUSG00000025287.16	ENST00000492081.1	496	5	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAGTGAAATAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	154055977	154076988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_154056139_154056387_154056426_154064606_154064691_154065046_154065151_154076904
ENSMUSG00000025289.16_0	chrX	-	972	7	FSM	ENSMUSG00000025289.16	ENSMUST00000026328.11	990	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2736	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCATATTCGTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	154121454	154106922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_154107025_154109590_154109626_154111441_154111573_154113298_154113422_154115351_154115469_154117833_154117952_154121108
ENSMUSG00000025290.18_1	chr14	+	508	6	FSM	ENSMUSG00000025290.18	ENSMUST00000169826.3	519	6	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAACTAAAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24540785	24545902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUSG00000025290.18_13	chr14	+	461	5	ISM	ENSMUSG00000025290.18	ENSMUST00000224568.2	714	6	989	-11	989	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAACTAAAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24541823	24545902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_24541884_24541974_24542185_24543450_24543562_24545497_24545518_24545842
ENSMUSG00000025290.18_14	chr14	+	1557	4	ISM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	1038	9	989	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGGGACATCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24541823	24547018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUSG00000025290.18_16	chr14	+	479	6	ISM	ENSMUSG00000025290.18	ENSMUST00000223999.2	525	7	1026	11	989	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAACTAAAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24541823	24545902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_24541884_24541974_24542185_24543450_24543562_24544119_24544138_24545497_24545518_24545842
ENSMUSG00000025290.18_3	chr14	+	1604	5	FSM	ENSMUSG00000025290.18	ENSMUST00000225023.2	1613	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGGGACATCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24540785	24547018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24545842
ENSMUSG00000025290.18_9	chr14	+	514	7	FSM	ENSMUSG00000025290.18	ENSMUST00000223999.2	525	7	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAAACTAAAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24540797	24545902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_24540827_24541817_24541884_24541974_24542185_24543450_24543562_24544119_24544138_24545497_24545518_24545842
ENSMUSG00000025314.17_0	chr2	-	7099	21	NIC	ENSMUSG00000025314.17	novel	7124	22	NA	NA	5	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAACACATTATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	90301675	90263243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436
ENSMUSG00000025314.17_1	chr2	-	7584	23	NIC	ENSMUSG00000025314.17	novel	7634	24	NA	NA	30	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAACACATTATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	90410961	90263243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_90266913_90270200_90270337_90270968_90271130_90274763_90274884_90276499_90276635_90276727_90276802_90278402_90278494_90280119_90280208_90281158_90281201_90282403_90282492_90283392_90283518_90283626_90283838_90285436_90285569_90288481_90288773_90289785_90290059_90290819_90291081_90293424_90293683_90294807_90295072_90298593_90298807_90299877_90300106_90301436_90301680_90305314_90305334_90410499
ENSMUSG00000025316.17_0	chr8	+	2272	13	FSM	ENSMUSG00000025316.17	ENSMUST00000093078.13	2289	13	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCACAGAGGCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	122677241	122752910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733838_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_14	chr8	+	1953	13	FSM	ENSMUSG00000025316.17	ENSMUST00000026354.15	1970	13	0	17	0	-17	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAACAAAAAAGAAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	122677318	122752659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_18	chr8	+	5333	13	ISM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	23882	7	-70	-7	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGACAATTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122701164	122755990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025316.17_3	chr8	+	5424	14	FSM	ENSMUSG00000025316.17	ENSMUST00000170857.8	5444	14	13	7	13	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGACAATTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122677295	122755990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122677388_122701165_122701305_122702638_122702731_122705293_122705494_122716693_122716811_122718266_122718443_122723778_122724019_122727702_122727871_122732290_122732422_122733829_122733902_122734491_122734531_122747257_122747384_122750741_122750886_122752302
ENSMUSG00000025323.11_0	chr12	-	5607	7	FSM	ENSMUSG00000025323.11	ENST00000222584.8	5625	7	10	8	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACCTTCTCATCACGGT	NA	NA	NA	NA	NA	NA	NA	NA	118265125	118198670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_118200475_118200584_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264544_118264961
ENSMUSG00000025323.11_4	chr12	-	5174	7	FSM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACATTTCACTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	118265016	118198989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_118200475_118200584_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433_118264539_118264961
ENSMUSG00000025323.11_5	chr12	-	5112	6	ISM	ENSMUSG00000025323.11	ENST00000649633.1	5179	7	486	4	486	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACATTTCACTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	118264531	118198989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_118200475_118200584_118202130_118218144_118218345_118225461_118225691_118262372_118263928_118264433
ENSMUSG00000025324.9_1	chr7	+	5402	21	FSM	ENSMUSG00000025324.9	ENSMUST00000168747.3	5419	21	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGCAATGAGAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	58308003	58479161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_58308664_58389939_58390145_58423702_58423789_58434479_58434587_58434973_58435106_58436202_58436334_58437941_58438195_58440731_58440950_58444217_58444413_58447047_58447649_58453211_58453316_58453416_58453544_58457122_58457308_58463273_58463599_58465904_58465982_58469357_58469484_58474047_58474249_58476820_58476902_58476993_58477099_58477522_58477711_58477866
ENSMUSG00000025326.13_0	chr7	+	3875	9	FSM	ENSMUSG00000025326.13	ENSMUST00000202945.4	3889	9	7	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAGTGTTGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	58878504	58939560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454
ENSMUSG00000025326.13_1	chr7	+	4886	11	FSM	ENSMUSG00000025326.13	ENSMUST00000107537.5	4911	11	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATGAAGAGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	58878514	58956466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_58879020_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUSG00000025326.13_5	chr7	+	9842	13	FSM	ENSMUSG00000025326.13	ENSMUST00000200758.4	9856	13	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGTTTGCTAGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	58878562	58961283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_58879020_58890714_58890782_58893097_58893218_58896920_58896966_58921694_58921985_58925515_58926763_58934427_58934573_58935801_58936008_58936615_58936781_58938153_58938310_58938454_58938529_58953415_58953560_58954557
ENSMUSG00000025332.15_0	chrX	+	5398	24	FSM	ENSMUSG00000025332.15	ENST00000452825.7	5409	24	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATATCCTTCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	151016026	151057039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151016707_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055213_151056202
ENSMUSG00000025332.15_16	chrX	+	6427	26	FSM	ENSMUSG00000025332.15	ENSMUST00000112588.9	6449	26	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATATGCGCTCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	151016236	151057521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070_151055271_151055704
ENSMUSG00000025332.15_18	chrX	+	5619	26	FSM	ENSMUSG00000025332.15	ENST00000404049.7	5646	26	9	18	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGGAGAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	151016293	151056764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025035_151025168_151027868_151027993_151028097_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050890_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054935_151055070_151055271_151055704
ENSMUSG00000025332.15_26	chrX	+	4343	25	FSM	ENSMUSG00000025332.15	ENST00000541639.5	4353	25	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGGAGAGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151016556	151055268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151023021_151023193_151025032_151025168_151027868_151027993_151028114_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036338_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070
ENSMUSG00000025332.15_27	chrX	+	4085	24	FSM	ENSMUSG00000025332.15	ENST00000382806.6	4101	24	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGGAGAGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151016562	151055268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151016707_151020628_151020707_151022625_151022749_151025032_151025168_151027868_151027993_151028114_151028280_151029250_151029410_151031423_151031544_151031657_151031817_151036419_151036602_151036694_151036858_151044932_151045053_151045158_151045354_151049552_151049735_151049812_151049938_151050078_151050227_151050899_151050997_151051760_151052120_151052710_151052850_151053347_151053528_151053689_151053828_151054007_151054590_151054855_151054926_151055070
ENSMUSG00000025337.11_0	chr5	-	1531	5	FSM	ENSMUSG00000025337.11	ENSMUST00000026387.11	1548	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGCTCTGGCTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	130284360	130274577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130275303_130277126_130277292_130279654_130279856_130282779_130282910_130284050
ENSMUSG00000025337.11_8	chr5	-	375	3	FSM	ENSMUSG00000025337.11	ENST00000423945.5	404	3	14	15	14	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAGGAAACGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	130284180	130275258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130275303_130279654_130279856_130284050
ENSMUSG00000025340.15_0	chr5	+	2678	9	FSM	ENSMUSG00000025340.15	ENSMUST00000119797.8	2690	9	6	6	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130200644	130243177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130200736_130216241_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUSG00000025340.15_7	chr5	+	2805	8	FSM	ENSMUSG00000025340.15	ENSMUST00000026390.8	2828	8	22	1	22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTGGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130216023	130243177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130216428_130219717_130219885_130226790_130226958_130235849_130235932_130237526_130237660_130239264_130239357_130240702_130240960_130241674
ENSMUSG00000025348.10_1	chr10	+	3671	24	FSM	ENSMUSG00000025348.10	ENST00000452168.6	3687	24	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTGACAATAAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	128765689	128794139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128765814_128765940_128766060_128776550_128776807_128777313_128777446_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025348.10_18	chr10	+	4005	25	FSM	ENSMUSG00000025348.10	ENSMUST00000218290.2	4020	25	8	7	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGACAATAAAATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128769696	128794141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550_128776807_128777313_128777446_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025348.10_27	chr10	+	3660	26	FSM	ENSMUSG00000025348.10	ENST00000555728.5	3677	26	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGGGGGCATGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128769927	128793907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550_128776807_128777313_128777446_128777690_128777811_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025348.10_7	chr10	+	3996	25	FSM	ENSMUSG00000025348.10	ENSMUST00000099112.4	4013	25	12	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATAAAATCTCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	128769698	128794146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128770064_128774908_128775037_128775136_128775217_128776550_128776807_128777690_128777811_128778676_128778885_128778986_128779181_128779421_128779511_128779619_128779748_128779873_128779970_128780109_128780172_128780272_128780443_128781273_128781424_128782155_128782272_128782667_128782861_128784685_128784767_128784851_128784932_128785029_128785105_128785242_128785346_128785831_128786009_128786172_128786302_128789311_128789426_128789628_128789728_128789814_128789941_128793489
ENSMUSG00000025350.16_0	chr10	-	1047	4	FSM	ENSMUSG00000025350.16	ENST00000257895.10	1089	4	33	9	33	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAATGAAGGTACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	128754398	128749448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128749792_128749999_128750168_128753748_128754008_128754121
ENSMUSG00000025350.16_2	chr10	-	1244	5	FSM	ENSMUSG00000025350.16	ENSMUST00000026406.14	1258	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAAAGCAGGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	128755157	128749466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128749806_128750003_128750168_128753748_128754008_128754121_128754462_128755015
ENSMUSG00000025351.15_4	chr10	+	1048	8	FSM	ENSMUSG00000025351.15	ENSMUST00000026407.9	1063	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCTAAAAAAGGAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	128745577	128748679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128745828_128746263_128746341_128747320_128747510_128747663_128747739_128747836_128747933_128748029_128748171_128748306_128748391_128748543
ENSMUSG00000025352.7_0	chr10	-	4044	3	FSM	ENSMUSG00000025352.7	ENSMUST00000026408.7	4062	3	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTTCAATAGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	128727580	128718174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128721356_128722016_128722415_128727115
ENSMUSG00000025353.6_0	chr10	-	1566	4	FSM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAGGAAAAAAATCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	128657463	128653777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128654885_128655822_128655975_128656129_128656384_128657410
ENSMUSG00000025353.6_1	chr10	-	1504	3	ISM	ENSMUSG00000025353.6	ENSMUST00000026409.5	1573	4	1085	11	1082	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTCAGAGGAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	128656378	128653781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128654885_128655822_128655975_128656129
ENSMUSG00000025353.6_2	chr10	-	1039	4	FSM	ENSMUSG00000025353.6	ENSMUST00000219215.2	1051	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAGAGAGATTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	128657475	128654362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128654885_128655822_128655975_128656129_128656430_128657410
ENSMUSG00000025353.6_4	chr10	-	666	3	FSM	ENSMUSG00000025353.6	ENSMUST00000217685.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGTATATTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	128657460	128654420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128654885_128655822_128655975_128657410
ENSMUSG00000025354.6_0	chr10	+	3046	7	FSM	ENSMUSG00000025354.6	ENST00000357606.7	3056	7	10	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTACCCATGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	128641419	128654034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128641557_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_2	chr10	+	4123	7	FSM	ENSMUSG00000025354.6	ENSMUST00000217745.2	4133	7	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATATATGACTTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128641429	128655125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128641553_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_8	chr10	+	4222	7	FSM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGGAATGCTTGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	128641544	128655308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128641584_128642036_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025354.6_9	chr10	+	4162	6	ISM	ENSMUSG00000025354.6	ENSMUST00000026410.2	4229	7	509	11	509	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAGCAAGGAATGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	128642053	128655304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128643490_128649906_128650014_128650434_128650555_128652580_128652742_128652826_128652930_128653069
ENSMUSG00000025355.8_0	chr10	+	2229	9	FSM	ENSMUSG00000025355.8	ENSMUST00000219404.2	2236	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTGACAGACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128626778	128635647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128626836_128627453_128627540_128630394_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ENSMUSG00000025355.8_1	chr10	+	1456	9	FSM	ENSMUSG00000025355.8	ENST00000548629.5	1474	9	9	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCATCAACCGGGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	128626832	128634819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128627014_128627453_128627540_128630394_128630526_128630757_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ENSMUSG00000025355.8_5	chr10	+	3402	9	FSM	ENSMUSG00000025355.8	ENSMUST00000026411.8	3402	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCTCCTTGTTTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128626829	128636693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128627014_128627453_128627540_128630394_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ENSMUSG00000025355.8_7	chr10	+	2158	8	ISM	ENSMUSG00000025355.8	ENSMUST00000219404.2	2236	9	689	7	638	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATCTGACAGACTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	128627467	128635647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128627540_128630394_128630526_128630688_128630905_128631428_128631675_128632257_128632384_128633995_128634161_128634304_128634433_128634573
ENSMUSG00000025357.9_0	chr10	-	2809	24	FSM	ENSMUSG00000025357.9	ENSMUST00000026414.9	2834	24	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCAACAAAAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	128579932	128556015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128556376_128556585_128556647_128556820_128556942_128557046_128557246_128558322_128558414_128559053_128559119_128559387_128559549_128563936_128564027_128564124_128564211_128565467_128565540_128565743_128565818_128566059_128566129_128566473_128566573_128566936_128567057_128567192_128567282_128568851_128568967_128569133_128569254_128569433_128569509_128569956_128570007_128571699_128571778_128572009_128572146_128572513_128572588_128572877_128573014_128579664
ENSMUSG00000025358.17_0	chr10	-	2222	7	FSM	ENSMUSG00000025358.17	ENSMUST00000026415.9	2240	7	12	6	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAGAGTGAATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	128540860	128533813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128535080_128535340_128535545_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_2	chr10	-	2385	8	FSM	ENSMUSG00000025358.17	ENSMUST00000026416.15	2406	8	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTCTCAGCTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	128540890	128533824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128535080_128535340_128535545_128535844_128535989_128537211_128537314_128538281_128538453_128539575_128539697_128539794_128539873_128540580
ENSMUSG00000025358.17_6	chr10	-	888	5	FSM	ENSMUSG00000025358.17	ENST00000440311.6	901	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAAGCCCTTTTCACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	128540859	128534966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128535080_128535340_128535545_128538281_128538453_128539575_128539697_128540580
ENSMUSG00000025359.11_0	chr10	+	1719	10	FSM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAGGTAAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	128542197	128554848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128542228_128549913_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554746
ENSMUSG00000025359.11_1	chr10	+	1439	8	FSM	ENSMUSG00000025359.11	ENST00000550464.5	1448	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAGGTAAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	128542197	128554848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128542228_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768
ENSMUSG00000025359.11_4	chr10	+	1675	9	ISM	ENSMUSG00000025359.11	ENST00000449260.6	1728	10	7730	9	7730	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAGGTAAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	128549927	128554848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128550025_128550150_128550298_128551089_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554746
ENSMUSG00000025359.11_8	chr10	+	1396	7	ISM	ENSMUSG00000025359.11	ENST00000550464.5	1448	8	8905	9	8905	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATAGGTAAGACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	128551102	128554848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128551225_128551395_128551558_128551795_128552420_128553619_128553737_128553926_128554012_128554466_128554673_128554768
ENSMUSG00000025362.7_0	chr10	-	665	4	FSM	ENSMUSG00000025362.7	ENSMUST00000026420.7	681	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20023	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTACATGGCATCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128462605	128460410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128460506_128461075_128461207_128461931_128462110_128462344
ENSMUSG00000025364.14_0	chr10	-	2454	12	FSM	ENSMUSG00000025364.14	ENSMUST00000131728.4	2483	12	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTCACTGTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	128401833	128393642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128394841_128394930_128394985_128395098_128395227_128395306_128395402_128395950_128396164_128396527_128396607_128396787_128396852_128398695_128398789_128398934_128399005_128399092_128399199_128399445_128399575_128401608
ENSMUSG00000025366.9_0	chr10	-	3967	31	FSM	ENSMUSG00000025366.9	ENSMUST00000026427.8	3981	31	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGGTGCACTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	128361725	128345833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355083_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025366.9_10	chr10	-	3353	31	FSM	ENSMUSG00000025366.9	ENST00000267113.4	3374	31	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAGAGGATCACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	128361596	128346349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128346529_128346848_128346899_128347334_128347441_128347523_128347656_128347737_128347837_128347926_128348088_128348195_128348334_128351554_128351642_128351733_128351806_128352013_128352110_128352227_128352318_128352401_128352451_128352544_128352628_128352822_128353000_128353117_128353265_128353483_128353634_128354796_128354884_128355010_128355114_128355296_128355390_128355467_128355555_128355657_128355707_128356141_128356225_128356512_128356690_128356775_128356900_128357482_128357539_128357695_128357786_128357923_128357997_128358117_128358192_128358289_128358425_128358942_128358985_128361332
ENSMUSG00000025369.16_0	chr10	+	4517	28	FSM	ENSMUSG00000025369.16	ENSMUST00000026433.9	4533	28	11	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCATCTTGTGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	128295173	128326036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025369.16_4	chr10	+	4549	29	FSM	ENSMUSG00000025369.16	ENSMUST00000099131.11	4562	29	13	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTCTTTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128295189	128325991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128295307_128297220_128297341_128298849_128298936_128299560_128299643_128299735_128299829_128301025_128301096_128301305_128301376_128304663_128304740_128304874_128305007_128305110_128305227_128305533_128305659_128310069_128310130_128310240_128310279_128310551_128310683_128310861_128310934_128316218_128316333_128316719_128316874_128317550_128317644_128317951_128318072_128318159_128318223_128318552_128318812_128319043_128319206_128319459_128319525_128319947_128320084_128320165_128320333_128321428_128321564_128323123_128323506_128323802_128323887_128324764
ENSMUSG00000025371.13_0	chr11	+	1545	8	FSM	ENSMUSG00000025371.13	ENSMUST00000026434.13	1557	8	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTTAGTGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119804646	119810373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119804764_119806238_119806349_119806457_119806546_119806850_119806938_119807506_119807573_119807754_119807836_119808809_119808865_119809432
ENSMUSG00000025372.17_0	chr11	+	3997	13	FSM	ENSMUSG00000025372.17	ENSMUST00000106231.8	4005	13	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCACTGAGTTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119833590	119893441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377
ENSMUSG00000025372.17_1	chr11	+	3497	14	FSM	ENSMUSG00000025372.17	ENSMUST00000075180.12	3518	14	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCACTGAGTTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119833603	119893441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119891899
ENSMUSG00000025372.17_3	chr11	+	2378	14	FSM	ENSMUSG00000025372.17	ENSMUST00000026436.10	2394	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTAGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119833598	119897602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119897184
ENSMUSG00000025372.17_4	chr11	+	2426	15	FSM	ENSMUSG00000025372.17	ENSMUST00000106233.2	2442	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTAGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119833598	119897602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119834075_119847927_119848004_119850982_119851070_119871614_119871677_119872218_119872291_119872814_119872953_119884521_119884675_119887348_119887574_119887714_119887917_119888314_119888517_119889459_119889529_119889960_119890124_119891377_119891413_119893863_119893912_119897184
ENSMUSG00000025373.15_0	chr10	+	3271	8	FSM	ENSMUSG00000025373.15	ENSMUST00000171342.3	3283	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACATTCTTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	128247529	128277302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951_128274329_128275381
ENSMUSG00000025373.15_1	chr10	+	3133	7	FSM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAAATTCTTAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128247619	128276201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128247695_128250987_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025373.15_3	chr10	+	3055	6	ISM	ENSMUSG00000025373.15	ENSMUST00000096386.13	3144	7	3376	6	3376	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAAATTCTTAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	128250990	128276201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128251171_128264459_128264573_128271181_128271454_128272336_128272473_128273176_128273281_128273951
ENSMUSG00000025374.14_0	chr10	-	1353	6	FSM	ENSMUSG00000025374.14	ENSMUST00000164199.8	1371	6	13	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTCTGGAGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	128245584	128237268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115
ENSMUSG00000025374.14_1	chr10	-	1110	7	FSM	ENSMUSG00000025374.14	ENSMUST00000026439.14	1130	7	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTCTGGAGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	128245728	128237268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128237793_128244022_128244090_128244184_128244267_128244403_128244476_128244566_128244706_128245115_128245218_128245604
ENSMUSG00000025377.15_0	chr11	-	2751	13	FSM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCTTGTGCCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119989544	119981362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334_119988408_119989451
ENSMUSG00000025377.15_1	chr11	-	2659	12	ISM	ENSMUSG00000025377.15	ENSMUST00000093901.12	2770	13	1149	6	1149	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCTTGTGCCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	119988408	119981362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_119982839_119983676_119983812_119984070_119984150_119984242_119984357_119984516_119984692_119984939_119985144_119986169_119986242_119986359_119986436_119986629_119986698_119987406_119987501_119987703_119987796_119988334
ENSMUSG00000025381.4_0	chr10	+	1371	6	FSM	ENSMUSG00000025381.4	ENSMUST00000219037.2	1383	6	7	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGAGTATTTATTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128158334	128163417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128158645_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_3	chr10	+	751	6	FSM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCGAAAGTACAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	128158336	128163044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128158400_128159198_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025381.4_6	chr10	+	683	5	ISM	ENSMUSG00000025381.4	ENSMUST00000026446.4	763	6	867	12	867	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCGAAAGTACAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	128159203	128163044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128159312_128159452_128159569_128161932_128162137_128162445_128162543_128162886
ENSMUSG00000025384.16_0	chr11	-	3180	10	FSM	ENSMUSG00000025384.16	ENSMUST00000026448.10	3193	10	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTGCCTCTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120269583	120260393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120260879_120261109_120261246_120261520_120261608_120262935_120263053_120263932_120264070_120264707_120265478_120266242_120266400_120267531_120268488_120269153_120269273_120269367
ENSMUSG00000025393.13_0	chr10	+	1895	10	FSM	ENSMUSG00000025393.13	ENSMUST00000026459.6	1916	10	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	25463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGAGATTCTATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	127919152	127926250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127919323_127919760_127919944_127920165_127920341_127920959_127921082_127921310_127921496_127921906_127922066_127922166_127922290_127924189_127924403_127924825_127925028_127925887
ENSMUSG00000025395.15_0	chr10	+	1516	13	FSM	ENSMUSG00000025395.15	ENSMUST00000178041.8	1536	13	6	14	2	-14	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAAGAATAAGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	127851042	127865838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859448_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUSG00000025395.15_3	chr10	+	1565	13	FSM	ENSMUSG00000025395.15	ENSMUST00000026461.8	1583	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTGATGTGCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	127851051	127865899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127851221_127851832_127851991_127853844_127853952_127854016_127854091_127855998_127856136_127857541_127857601_127858731_127858842_127859451_127859544_127859649_127859789_127862386_127862457_127862921_127863008_127865054_127865154_127865634
ENSMUSG00000025402.13_0	chr10	-	2566	7	FSM	ENSMUSG00000025402.13	ENSMUST00000026469.9	2582	7	12	4	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCATGGCCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127502567	127496790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127497649_127498599_127498792_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUSG00000025402.13_1	chr10	-	2295	6	FSM	ENSMUSG00000025402.13	ENSMUST00000099157.4	2311	6	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATCCATGGCCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	127502488	127496790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127497649_127499000_127499134_127499218_127499271_127499608_127499743_127500133_127501008_127502244
ENSMUSG00000025403.6_0	chr10	-	2233	12	FSM	ENSMUSG00000025403.6	ENSMUST00000219239.2	2238	12	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCTGCTTCTGTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	127358250	127352991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356976_127358156
ENSMUSG00000025403.6_10	chr10	-	2274	12	FSM	ENSMUSG00000025403.6	ENSMUST00000026470.6	2289	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAATTGTATTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127358303	127353012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127353786_127353893_127354002_127354093_127354250_127354339_127354440_127354660_127354827_127354989_127355130_127355257_127355381_127355498_127355581_127355839_127356041_127356206_127356287_127356786_127356985_127358156
ENSMUSG00000025404.16_0	chr10	+	4237	27	FSM	ENSMUSG00000025404.16	ENSMUST00000166820.8	4281	27	27	17	27	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATATAAAAAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127216557	127335212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127216806_127226179_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUSG00000025404.16_2	chr10	+	4018	26	FSM	ENSMUSG00000025404.16	ENSMUST00000077046.12	4029	26	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCGCTGTTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	127226187	127335249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUSG00000025404.16_3	chr10	+	3970	25	FSM	ENSMUSG00000025404.16	ENSMUST00000105250.9	3975	25	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTCGCTGTTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	127226181	127335249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127226297_127235994_127236063_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127298056_127298153_127300850_127300883_127307636_127307870_127312388_127312568_127317561_127317664_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUSG00000025404.16_5	chr10	+	4169	24	FSM	ENSMUSG00000025404.16	ENSMUST00000064793.13	4175	24	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATATAAAAAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127256735	127335212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127257236_127280144_127280345_127287860_127287903_127288560_127288648_127290498_127290626_127293518_127293598_127294007_127294068_127294678_127294820_127295335_127295445_127300850_127300883_127300999_127301054_127307636_127307870_127312388_127312568_127317561_127317625_127319844_127320088_127320374_127320502_127320730_127320892_127321284_127321440_127323643_127323745_127328437_127328608_127330889_127331038_127333030_127333129_127333409_127333495_127334237
ENSMUSG00000025408.16_0	chr10	+	876	4	FSM	ENSMUSG00000025408.16	ENSMUST00000026475.15	890	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTCTCACTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127126652	127132153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127126761_127129580_127129629_127131189_127131348_127131591
ENSMUSG00000025409.15_0	chr10	-	4132	13	FSM	ENSMUSG00000025409.15	ENSMUST00000026476.13	4165	13	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGTTCTGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127124734	127117832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119812_127119911_127120085_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ENSMUSG00000025409.15_1	chr10	-	4279	13	FSM	ENSMUSG00000025409.15	ENSMUST00000119078.8	4287	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGTTCTGACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127124887	127117832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127118777_127118893_127118958_127119260_127119314_127119394_127119809_127119911_127120082_127120203_127120355_127120566_127121226_127121400_127122442_127122662_127122826_127122936_127123040_127123264_127123408_127123495_127123560_127124577
ENSMUSG00000025410.11_0	chr10	+	1766	14	FSM	ENSMUSG00000025410.11	ENSMUST00000026479.11	1784	14	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTCAGAACCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	127102265	127117811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127102404_127103282_127103352_127110582_127110680_127110862_127110925_127111692_127111792_127112252_127112414_127112570_127112719_127113123_127113190_127113355_127113395_127113563_127113642_127113735_127113808_127113988_127114092_127114185_127114278_127117269
ENSMUSG00000025413.14_0	chr4	-	2100	10	FSM	ENSMUSG00000025413.14	ENSMUST00000026480.13	2121	10	12	9	12	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGAGATCTTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	106536129	106519461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106520429_106522852_106522936_106524692_106524775_106525233_106525452_106527645_106527733_106528820_106528946_106531607_106531686_106533794_106533957_106535381_106535500_106535949
ENSMUSG00000025417.9_0	chr10	-	3292	10	FSM	ENSMUSG00000025417.9	ENSMUST00000013970.9	3307	10	9	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTCACAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127047415	127032941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_3	chr10	-	1525	9	FSM	ENSMUSG00000025417.9	ENST00000422156.7	1542	9	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATAGGAGGAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	127047477	127034626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127042482_127042580_127044738_127044837_127047206
ENSMUSG00000025417.9_9	chr10	-	1501	10	FSM	ENSMUSG00000025417.9	ENST00000550465.5	1517	10	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCTAAGTGCCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	127047405	127034668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127035014_127035181_127035286_127035457_127035726_127036052_127036167_127036708_127036748_127036907_127037055_127041543_127041688_127042482_127042549_127044761_127044837_127047206
ENSMUSG00000025420.14_0	chr18	-	1554	15	FSM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTGTGCCCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	77106946	77065085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156_77105324_77106880
ENSMUSG00000025420.14_1	chr18	-	1482	14	ISM	ENSMUSG00000025420.14	ENST00000356157.12	1557	15	1629	3	1629	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAAGCTGTGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	77105320	77065088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_77065222_77066125_77066229_77067694_77067858_77082089_77082201_77085294_77085387_77090126_77090246_77090432_77090497_77092418_77092518_77095203_77095282_77095480_77095580_77098642_77098742_77099685_77099801_77103697_77103741_77105156
ENSMUSG00000025421.16_0	chr18	+	5461	7	FSM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACTATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77031793	77062993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77031882_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_11	chr18	+	3116	7	FSM	ENSMUSG00000025421.16	ENSMUST00000150990.9	3126	7	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTCGATAGAATCGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	77032082	77060591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77032228_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_18	chr18	+	5374	6	ISM	ENSMUSG00000025421.16	ENSMUST00000097522.11	5477	7	7020	10	6675	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACTATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77038807	77062993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025421.16_6	chr18	+	1528	8	FSM	ENSMUSG00000025421.16	ENSMUST00000145634.9	1538	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACAGATGTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	77031839	77059091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77031882_77033038_77033054_77038808_77038920_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000025422.11_0	chr10	+	4104	18	FSM	ENSMUSG00000025422.11	ENST00000257897.7	4120	18	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGTAGGAGCAACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126911227	126929201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126911461_126918232_126918292_126918834_126918923_126919076_126919163_126919299_126919448_126920981_126921117_126921419_126921530_126922795_126922955_126923102_126923190_126923270_126923376_126923753_126923917_126924077_126924198_126925098_126925228_126926295_126926445_126926540_126926632_126926743_126926967_126927061_126927318_126927438
ENSMUSG00000025423.17_0	chr18	+	3040	14	FSM	ENSMUSG00000025423.17	ENSMUST00000114777.10	3060	14	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTCTGATCATAATTC	NA	NA	NA	NA	NA	NA	NA	NA	77152915	77241488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77153116_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025423.17_5	chr18	+	2064	13	FSM	ENSMUSG00000025423.17	ENSMUST00000114776.4	2077	13	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACTTAACTATGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	77153390	77234625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77234398
ENSMUSG00000025423.17_6	chr18	+	2246	14	FSM	ENSMUSG00000025423.17	ENSMUST00000168882.9	2254	14	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGTTAACTTTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	77153514	77240805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77153604_77184944_77185420_77193500_77193586_77207607_77207659_77207751_77207843_77214552_77214688_77216651_77216758_77217745_77217820_77220786_77220948_77221629_77221764_77223475_77223648_77232698_77232839_77237756_77237795_77240310
ENSMUSG00000025427.16_2	chr18	-	991	2	FSM	ENSMUSG00000025427.16	ENST00000590330.1	1004	2	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCATTGTAGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77653018	77650436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77651147_77652737
ENSMUSG00000025428.16_0	chr18	+	2458	12	FSM	ENSMUSG00000025428.16	ENSMUST00000026495.15	2471	12	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	77861438	77870566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_20	chr18	+	2661	12	FSM	ENSMUSG00000025428.16	ENSMUST00000114748.2	2674	12	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	77861668	77870566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77862244_77863476_77863556_77865218_77865389_77866161_77866336_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025428.16_27	chr18	+	1764	12	FSM	ENSMUSG00000025428.16	ENST00000590665.5	1782	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATACTGTGTGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	77861699	77870199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77861811_77863476_77863556_77865218_77865389_77866161_77866270_77866431_77866599_77866778_77866928_77867526_77867679_77867778_77868004_77868684_77868793_77868911_77869057_77869498_77869650_77870000
ENSMUSG00000025429.10_0	chr18	+	2255	15	FSM	ENSMUSG00000025429.10	ENSMUST00000114741.4	2267	15	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCGACTAAGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	77882252	77970575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77882451_77922824_77922926_77934078_77934157_77935803_77935839_77942497_77942605_77949546_77949610_77958046_77958146_77959267_77959314_77959468_77959549_77961060_77961160_77961972_77962070_77963537_77963620_77965294_77965330_77967055_77967117_77969501
ENSMUSG00000025436.13_0	chr10	-	875	6	FSM	ENSMUSG00000025436.13	ENSMUST00000026504.13	903	6	16	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACACATTAAACATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126737208	126704307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126704595_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUSG00000025436.13_1	chr10	-	1028	6	FSM	ENSMUSG00000025436.13	ENSMUST00000168520.3	1043	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATACTTATTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	126737207	126723122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126723564_126727508_126727593_126730093_126730232_126734755_126734838_126735449_126735496_126736970
ENSMUSG00000025437.16_0	chr3	+	3876	24	FSM	ENSMUSG00000025437.16	ENSMUST00000117492.9	3886	24	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTATAAACTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	152052117	152098963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025437.16_2	chr3	+	4112	24	FSM	ENSMUSG00000025437.16	ENSMUST00000026507.13	4153	24	37	4	26	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAATGGTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	152052151	152099245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080551_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095469_152097286_152097356_152097845
ENSMUSG00000025437.16_5	chr3	+	4164	24	FSM	ENSMUSG00000025437.16	ENSMUST00000197748.5	4183	24	10	9	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAATGGTGATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	152052135	152099245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152052277_152063476_152063609_152063782_152063837_152064272_152064336_152065919_152066073_152067536_152067640_152069614_152069685_152071850_152071965_152072377_152072457_152073872_152074288_152075913_152076055_152079022_152079136_152080256_152080427_152080527_152080623_152081878_152081913_152084480_152084527_152085072_152085254_152086150_152086278_152087351_152087522_152088547_152088630_152089752_152089862_152095377_152095481_152097286_152097356_152097845
ENSMUSG00000025439.6_0	chr7	+	1495	7	FSM	ENSMUSG00000025439.6	ENSMUST00000026506.5	1504	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCTGTGATTTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	97345848	97368085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97346077_97354795_97354933_97360906_97361006_97361833_97361942_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025439.6_4	chr7	+	770	5	FSM	ENSMUSG00000025439.6	ENST00000532069.5	784	5	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTCAGCTGCAAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	97345965	97367684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97346077_97354795_97354933_97363113_97363288_97365657_97365747_97367425
ENSMUSG00000025451.16_13	chr13	+	1506	10	FSM	ENSMUSG00000025451.16	ENST00000514514.5	1524	10	8	10	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAATAAATGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	119565549	119593897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119593523
ENSMUSG00000025451.16_22	chr13	+	2697	11	FSM	ENSMUSG00000025451.16	ENST00000306846.8	2707	11	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTAAAATGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	119565549	119594742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119565949_119566695_119566866_119574504_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_4	chr13	+	2530	11	FSM	ENSMUSG00000025451.16	ENSMUST00000026520.14	2551	11	13	8	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAAATGGTATCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	119565470	119594746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577408_119582272_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_42	chr13	+	1456	10	FSM	ENSMUSG00000025451.16	ENST00000338972.8	1476	10	9	11	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTGAAAGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	119566706	119593911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119566866_119574504_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025451.16_8	chr13	+	1614	11	FSM	ENSMUSG00000025451.16	ENST00000436644.6	1633	11	8	11	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTTGAAAGAAAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	119565549	119593911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119565697_119566695_119566866_119574504_119574691_119577294_119577412_119582278_119582385_119584250_119584377_119586439_119586547_119587231_119587350_119588327_119588383_119592231_119592326_119593523
ENSMUSG00000025453.19_0	chr13	-	3118	15	FSM	ENSMUSG00000025453.19	ENSMUST00000069902.13	3122	15	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGGTCGAGTTAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	119545529	119471983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
ENSMUSG00000025453.19_1	chr13	-	3339	17	FSM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTTCGTCTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	119545488	119472063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
ENSMUSG00000025453.19_14	chr13	-	3175	14	FSM	ENSMUSG00000025453.19	ENSMUST00000109204.8	3198	14	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTATTAAAAAAAGAACTC	NA	NA	NA	NA	NA	NA	NA	NA	119545517	119490273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087_119541291_119545438
ENSMUSG00000025453.19_3	chr13	-	3276	16	ISM	ENSMUSG00000116207.2	ENSMUST00000223268.2	3339	17	4202	9	4202	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGTGATGTAGCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	119541286	119472072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_119472943_119474911_119475028_119476362_119476482_119491194_119491277_119494038_119494199_119502862_119503043_119505011_119505173_119506447_119506682_119508931_119509128_119511164_119511311_119518211_119518400_119523114_119523204_119525729_119525818_119531146_119531365_119533282_119533513_119541087
ENSMUSG00000025464.16_0	chr7	+	4633	7	FSM	ENSMUSG00000025464.16	ENSMUST00000026537.13	4655	7	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAATGAGAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	139705581	139717127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139708930_139709184_139711559_139711673_139712293_139712452_139713922
ENSMUSG00000025464.16_2	chr7	+	925	4	FSM	ENSMUSG00000025464.16	ENST00000480071.2	942	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACAGGTACTCCACCTC	NA	NA	NA	NA	NA	NA	NA	NA	139705665	139711664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_139705796_139706238_139706729_139707420_139707621_139711559
ENSMUSG00000025465.14_0	chr7	-	1547	8	FSM	ENSMUSG00000025465.14	ENSMUST00000026538.13	1557	8	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTGTGTGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	139696381	139685624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139686291_139687996_139688065_139689899_139690020_139690451_139690557_139691608_139691709_139692331_139692460_139692848_139693047_139696219
ENSMUSG00000025466.20_0	chr7	-	657	6	FSM	ENSMUSG00000025466.20	ENSMUST00000026539.14	685	6	19	9	-16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGAACTTGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	139682335	139679391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139679620_139679791_139679866_139681002_139681102_139681244_139681316_139681513_139681583_139682219
ENSMUSG00000025470.12_0	chr7	+	1057	6	FSM	ENSMUSG00000025470.12	ENSMUST00000168194.3	1076	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGGCATCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	139616337	139620509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_139616520_139616732_139616807_139617132_139617335_139617428_139617554_139619238_139619359_139620155
ENSMUSG00000025473.17_0	chr7	-	3102	24	FSM	ENSMUSG00000025473.17	ENSMUST00000106069.9	3117	24	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTACATGGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	139572468	139558852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139559441_139559872_139559948_139562694_139562746_139563220_139563287_139563747_139563908_139564641_139564757_139565249_139565344_139565741_139565820_139566215_139566382_139566645_139566722_139566805_139566996_139567091_139567182_139567472_139567651_139567731_139567881_139568126_139568209_139568375_139568543_139568723_139568793_139568874_139568938_139569156_139569341_139569809_139569887_139569963_139570043_139570184_139570262_139571258_139571363_139572344
ENSMUSG00000025473.17_1	chr7	-	3086	24	FSM	ENSMUSG00000025473.17	ENSMUST00000026546.16	3100	24	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTACATGGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	139572455	139558852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139559441_139559872_139559948_139562694_139562746_139563220_139563287_139563747_139563908_139564641_139564757_139565249_139565344_139565741_139565820_139566215_139566382_139566645_139566722_139566805_139566996_139567091_139567182_139567472_139567651_139567731_139567881_139568126_139568209_139568375_139568543_139568723_139568793_139568874_139568938_139569156_139569341_139569809_139569887_139569963_139570043_139570184_139570262_139571258_139571360_139572344
ENSMUSG00000025474.10_0	chr7	-	2945	18	FSM	ENSMUSG00000025474.10	ENSMUST00000026547.9	2960	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCTGTTGTGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	139616170	139575914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525_139613712_139616008
ENSMUSG00000025474.10_14	chr7	-	2672	17	FSM	ENSMUSG00000025474.10	ENST00000683014.1	2690	17	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCCATTCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	139613686	139575967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581479_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025474.10_16	chr7	-	2739	17	FSM	ENSMUSG00000025474.10	ENST00000682905.1	2750	17	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCCATTCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	139613693	139575967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613498
ENSMUSG00000025474.10_31	chr7	-	2578	16	FSM	ENSMUSG00000025474.10	ENST00000683060.1	2594	16	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCCATTCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	139613688	139575967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139576080_139576694_139576859_139577884_139578014_139578681_139578826_139579139_139579261_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025474.10_35	chr7	-	2579	16	FSM	ENSMUSG00000025474.10	ENST00000683383.1	2594	16	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGCCATTCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	139613689	139575967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_139576080_139576694_139576859_139578681_139578826_139579139_139579261_139580927_139581057_139581338_139581512_139584711_139584893_139585182_139585364_139585927_139586074_139586764_139586955_139587339_139587540_139587799_139588008_139609739_139609900_139610923_139611101_139612031_139612161_139613525
ENSMUSG00000025477.15_0	chr7	+	2814	16	FSM	ENSMUSG00000025477.15	ENSMUST00000106098.8	2826	16	6	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGTTCCTGCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	138969030	139159562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138969381_139033969_139034012_139057910_139058012_139061547_139061636_139091323_139091388_139096546_139096651_139103752_139103806_139105577_139105698_139118094_139118180_139138789_139138886_139138979_139139055_139147279_139147354_139154859_139154972_139157265_139157335_139158097_139158186_139158269
ENSMUSG00000025481.13_0	chr7	+	656	4	FSM	ENSMUSG00000025481.13	ENSMUST00000211372.2	688	4	25	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCTGCCAATCTGAACC	NA	NA	NA	NA	NA	NA	NA	NA	140415209	140417872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140415316_140415524_140415665_140416659_140416796_140417598
ENSMUSG00000025484.10_0	chr7	-	2257	4	FSM	ENSMUSG00000025484.10	ENSMUST00000026557.10	2268	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTCTATGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140437011	140433306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140436133
ENSMUSG00000025484.10_5	chr7	-	749	7	FSM	ENSMUSG00000025484.10	ENSMUST00000211624.2	769	7	0	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTACAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	140437275	140434304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140434537_140434677_140434735_140434986_140435079_140435718_140435844_140436133_140436263_140436676_140436769_140437253
ENSMUSG00000025485.14_0	chr7	+	3393	10	FSM	ENSMUSG00000025485.14	ENSMUST00000026558.7	3406	10	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGATCAACATGCTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	140436879	140443640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440985_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025485.14_2	chr7	+	1684	10	FSM	ENSMUSG00000025485.14	ENST00000325207.9	1697	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCCTCTCCAGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	140437386	140442420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140437468_140437757_140437806_140437894_140438486_140438775_140438868_140439351_140439503_140440789_140440886_140440967_140441131_140441208_140441354_140441752_140441873_140442223
ENSMUSG00000025486.18_0	chr7	-	1394	7	FSM	ENSMUSG00000025486.18	ENSMUST00000106048.10	1416	7	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTAGTATAAAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	140461776	140443598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140443997_140444887_140445098_140449401_140449564_140456266_140456368_140457562_140457796_140457869_140458059_140461675
ENSMUSG00000025486.18_5	chr7	-	846	5	FSM	ENSMUSG00000025486.18	ENST00000524564.5	866	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCTCCAACACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140457786	140443906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140443997_140444828_140445098_140449401_140449564_140456266_140456368_140457562
ENSMUSG00000025486.18_9	chr7	-	817	5	FSM	ENSMUSG00000025486.18	ENST00000532956.5	834	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCTCCAACACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140458052	140443906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140443997_140444887_140445098_140456266_140456368_140457562_140457796_140457869
ENSMUSG00000025487.16_0	chr7	+	1973	13	FSM	ENSMUSG00000025487.16	ENSMUST00000026560.14	1989	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTCTCTTGGTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	140461890	140478549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140462480_140463412_140463492_140466300_140466336_140466423_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025487.16_1	chr7	+	1041	10	FSM	ENSMUSG00000025487.16	ENST00000431206.6	1051	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCTGCAGACCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140466310	140478207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140466480_140466714_140466759_140466931_140467019_140469217_140469390_140470244_140470325_140470407_140470534_140474393_140474457_140477329_140477411_140477520_140477638_140478105
ENSMUSG00000025488.10_0	chr7	-	341	2	FSM	ENSMUSG00000025488.10	ENSMUST00000026561.10	360	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCCTACTGCTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140480346	140478863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140479003_140480144
ENSMUSG00000025489.6_0	chr7	-	725	2	FSM	ENSMUSG00000025489.6	ENSMUST00000026562.6	765	2	30	10	30	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAGAAATGTGTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	140530174	140528880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140529362_140529930
ENSMUSG00000025491.15_1	chr7	+	685	2	FSM	ENSMUSG00000025491.15	ENSMUST00000026564.9	736	2	51	0	51	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTAGTCCTGTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	140548003	140549738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140548352_140549401
ENSMUSG00000025491.15_3	chr7	+	521	2	FSM	ENSMUSG00000025491.15	ENST00000680209.1	538	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGCTGTGACTTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	140548177	140549715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140548352_140549368
ENSMUSG00000025492.7_0	chr7	-	661	2	FSM	ENSMUSG00000025492.7	ENSMUST00000026565.7	678	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCCTATGACTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	140590673	140589505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140589803_140590309
ENSMUSG00000025494.9_0	chr7	-	1986	10	FSM	ENSMUSG00000025494.9	ENSMUST00000097958.3	1990	10	4	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140680455	140671087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140675231_140680391
ENSMUSG00000025494.9_1	chr7	-	1897	9	FSM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140680437	140671087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUSG00000025494.9_2	chr7	-	1841	8	ISM	ENSMUSG00000025494.9	ENSMUST00000210167.2	1897	9	5589	0	5589	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140674848	140671087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694
ENSMUSG00000025494.9_3	chr7	-	1901	9	ISM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	5246	-2	5228	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGCTTATTTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140675209	140671087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694
ENSMUSG00000025494.9_5	chr7	-	1589	10	FSM	ENSMUSG00000025494.9	ENSMUST00000209294.2	1612	10	23	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCGGGCTTATTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	140680432	140671089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140671415_140671715_140671906_140672067_140672219_140672293_140672397_140672498_140672643_140672890_140673032_140673112_140673244_140673639_140673839_140674694_140674859_140680391
ENSMUSG00000025495.16_0	chr7	+	3608	12	FSM	ENSMUSG00000025495.16	ENSMUST00000026568.10	3624	12	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAACAAAAGTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	140711214	140737519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140711431_140715221_140715324_140723005_140723089_140726993_140727062_140731562_140731698_140732104_140732156_140732687_140732802_140732887_140733007_140734265_140734381_140734469_140734616_140734723_140734910_140735246
ENSMUSG00000025498.16_0	chr7	-	2227	10	FSM	ENSMUSG00000025498.16	ENSMUST00000106023.8	2237	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAATGGAAACAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	140846334	140842628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140843294_140843368_140843488_140843571_140843962_140844135_140844229_140844405_140844473_140844637_140844697_140844987_140845205_140845289_140845453_140845535_140845958_140846302
ENSMUSG00000025498.16_1	chr7	-	2180	9	ISM	ENSMUSG00000025498.16	ENSMUST00000106023.8	2237	10	395	7	395	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGGAAACAGTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	140845939	140842625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_140843294_140843368_140843488_140843571_140843962_140844135_140844229_140844405_140844473_140844637_140844697_140844987_140845205_140845289_140845453_140845535
ENSMUSG00000025499.19_0	chr7	-	2802	6	FSM	ENSMUSG00000025499.19	ENSMUST00000026572.11	2828	6	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAAGAGTATCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	140773856	140769026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140771108_140771254_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUSG00000025499.19_1	chr7	-	2264	6	FSM	ENSMUSG00000025499.19	ENSMUST00000168550.8	2272	6	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTAGCAGGCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140773910	140769847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUSG00000025499.19_2	chr7	-	1190	5	FSM	ENSMUSG00000025499.19	ENSMUST00000097957.11	1199	5	8	1	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140773910	140770839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140771381_140772043_140772204_140772354_140772534_140772742_140772895_140773752
ENSMUSG00000025499.19_3	chr7	-	1045	5	FSM	ENSMUSG00000025499.19	ENSMUST00000124314.3	1073	5	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTCTGGCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140772825	140770839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140771381_140771867_140771950_140772043_140772204_140772354_140772534_140772742
ENSMUSG00000025503.6_0	chr7	+	1360	9	FSM	ENSMUSG00000025503.6	ENSMUST00000211654.2	1362	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTTCATTTCACCG	NA	NA	NA	NA	NA	NA	NA	NA	140972113	140982879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140972232_140975522_140975658_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUSG00000025503.6_1	chr7	+	1218	8	FSM	ENSMUSG00000025503.6	ENSMUST00000026576.5	1229	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGTTTCATTTCACCGT	NA	NA	NA	NA	NA	NA	NA	NA	140972121	140982880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140972232_140975961_140976086_140978407_140978516_140980200_140980333_140981493_140981670_140981784_140981983_140982096_140982243_140982656
ENSMUSG00000025504.15_0	chr7	+	3168	21	FSM	ENSMUSG00000025504.15	ENSMUST00000026577.13	3191	21	18	5	18	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACTTAGATATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140918810	140942928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140918972_140921805_140921888_140921967_140922024_140922838_140922904_140934858_140935021_140935557_140935708_140935782_140935863_140936004_140936154_140936237_140936309_140936449_140936577_140936959_140937049_140937154_140937230_140937455_140937605_140937698_140937832_140938117_140938231_140940234_140940341_140940914_140941035_140941293_140941367_140941492_140941674_140941760_140941894_140942035
ENSMUSG00000025505.17_0	chr7	+	1520	6	FSM	ENSMUSG00000025505.17	ENSMUST00000133012.8	1524	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TTAAAAAAAAAGAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	140908046	140916724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140908180_140911330_140911475_140912822_140912922_140913560_140913645_140913923_140914017_140915757
ENSMUSG00000025505.17_1	chr7	+	1781	6	FSM	ENSMUSG00000025505.17	ENSMUST00000026578.14	1800	6	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTTGTCTTCATTATA	NA	NA	NA	NA	NA	NA	NA	NA	140908060	140917068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140908180_140911330_140911475_140912822_140912843_140913550_140913645_140913923_140914017_140915757
ENSMUSG00000025507.14_0	chr7	-	3286	15	FSM	ENSMUSG00000025507.14	ENSMUST00000106005.9	2900	15	8	-394	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	141023260	141018033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880
ENSMUSG00000025507.14_1	chr7	-	3349	16	FSM	ENSMUSG00000025507.14	ENSMUST00000026580.12	3357	16	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGAATACCTTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	141023938	141018033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141018761_141018990_141019191_141019290_141019405_141019483_141019603_141019704_141019829_141019915_141020067_141020143_141020280_141020370_141020519_141020598_141020779_141020888_141021015_141021085_141021288_141021387_141021443_141021524_141021735_141022063_141022478_141022880_141023267_141023881
ENSMUSG00000025508.14_0	chr7	+	954	5	FSM	ENSMUSG00000025508.14	ENSMUST00000084434.11	964	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGCACTGCTCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	141027292	141031498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141027621_141027820_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025508.14_4	chr7	+	413	4	FSM	ENSMUSG00000025508.14	ENSMUST00000106003.2	449	4	29	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAGTGGCCTTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	141027791	141031256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141027945_141028638_141028688_141030916_141031016_141031144
ENSMUSG00000025509.16_0	chr7	+	2616	9	FSM	ENSMUSG00000025509.16	ENSMUST00000164016.8	2625	9	9	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTATCCTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	141035119	141040656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141035387_141037185_141037419_141037504_141037571_141037917_141038128_141038342_141038404_141038504_141038673_141038757_141038891_141039079_141039203_141039301
ENSMUSG00000025510.15_0	chr7	+	1836	8	FSM	ENSMUSG00000025510.15	ENSMUST00000106000.10	1865	8	18	11	-11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTATAAGCACTCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	141047323	141051375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141047498_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_2	chr7	+	1698	8	FSM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATGTAAATGTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	141047334	141051366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141047380_141048331_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_5	chr7	+	1643	7	ISM	ENSMUSG00000025510.15	ENSMUST00000177840.9	1708	8	1007	10	-393	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATGTAAATGTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	141048341	141051366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_141048460_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_6	chr7	+	1609	7	FSM	ENSMUSG00000025510.15	ENSMUST00000058746.7	1619	7	0	10	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTATAAGCACTCGAAT	NA	NA	NA	NA	NA	NA	NA	NA	141048734	141051375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141048810_141049167_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050382_141050463
ENSMUSG00000025510.15_8	chr7	+	751	6	FSM	ENSMUSG00000025510.15	ENST00000528011.2	764	6	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCACGATGATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	141049174	141050605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141049259_141049378_141049571_141049849_141049925_141050033_141050139_141050222_141050376_141050463
ENSMUSG00000025511.16_0	chr7	+	1452	8	FSM	ENSMUSG00000025511.16	ENSMUST00000026585.14	1466	8	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGGAAGTTCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141055164	141073338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141055411_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025511.16_2	chr7	+	1274	8	FSM	ENSMUSG00000025511.16	ENSMUST00000117634.2	1281	8	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTTCAACTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	141056314	141073329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141056392_141062399_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025511.16_5	chr7	+	668	6	FSM	ENSMUSG00000025511.16	ENST00000346501.8	677	6	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAAGGAAGATGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	141062401	141072904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025511.16_6	chr7	+	1196	7	FSM	ENSMUSG00000025511.16	ENSMUST00000239217.2	1157	7	424	-463	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCCTTCAACTGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	141062400	141073329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141062480_141069464_141069657_141070674_141070750_141071484_141071587_141071686_141071819_141071892_141071977_141072797
ENSMUSG00000025512.16_0	chr7	-	4192	13	FSM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	-18	8	-18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTCTATAGTCTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	141119747	141073056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731_141112887_141119685
ENSMUSG00000025512.16_1	chr7	-	4130	12	ISM	ENSMUSG00000025512.16	ENSMUST00000153191.8	4182	13	6844	7	6832	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTATAGTCTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	141112885	141073055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_141076060_141076283_141076327_141076513_141076595_141093646_141093803_141095314_141095417_141102521_141102615_141106344_141106407_141107511_141107619_141108375_141108421_141109481_141109615_141110062_141110213_141112731
ENSMUSG00000025521.16_0	chr8	+	1107	6	FSM	ENSMUSG00000025521.16	ENSMUST00000026595.13	1122	6	6	9	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCGAATGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65399842	65421676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65416849_65416985_65418190_65418294_65421362
ENSMUSG00000025521.16_2	chr8	+	905	5	FSM	ENSMUSG00000025521.16	ENSMUST00000079896.9	916	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGCGAATGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65399909	65421676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_65399986_65409037_65409185_65411996_65412262_65418190_65418294_65421362
ENSMUSG00000025525.13_0	chrX	+	1346	9	FSM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCACACGAGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	111221037	111282446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_111221134_111243497_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025525.13_3	chrX	+	1251	8	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	22466	6	-1	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCACACGAGCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	111243496	111282446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853_111273968_111274158_111274268_111281890
ENSMUSG00000025525.13_5	chrX	+	557	6	FSM	ENSMUSG00000025525.13	ENST00000511152.1	578	6	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCAAAGGAAGAAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	111243503	111273947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_111243603_111255934_111256055_111259499_111259553_111260996_111261096_111263857_111263950_111273853
ENSMUSG00000025525.13_6	chrX	+	549	6	ISM	ENSMUSG00000025525.13	ENSMUST00000026599.10	1359	9	22483	8505	16	-15	internal_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCAAAGGAAGAAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	111243513	111273947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_111243603_111255934_111256055_111259497_111259553_111260996_111261096_111263857_111263950_111273853
ENSMUSG00000025531.15_0	chrX	-	4792	14	ISM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	25946	0	25946	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTGTAATGGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	112069268	111950289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200
ENSMUSG00000025531.15_1	chrX	-	4861	15	FSM	ENSMUSG00000025531.15	ENSMUST00000026607.15	4868	15	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTCCACTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	112095214	111950296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112022245_112022363_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUSG00000025531.15_2	chrX	-	4738	14	FSM	ENSMUSG00000025531.15	ENSMUST00000113388.3	4749	14	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTCCACTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	112095208	111950296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112025712_112026128_112049032_112049158_112050410_112050484_112069200_112069268_112095137
ENSMUSG00000025531.15_3	chrX	-	4653	13	ISM	ENSMUSG00000025531.15	ENSMUST00000113388.3	4749	14	25961	5	25961	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTCCACTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	112069253	111950296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_111953333_111957032_111957194_111962758_111962858_111974543_111974641_111979275_111979340_111981613_111981719_111989834_111989913_112019872_112020099_112021625_112021747_112025712_112026128_112049032_112049158_112050410_112050484_112069200
ENSMUSG00000025532.14_0	chr5	+	1459	6	FSM	ENSMUSG00000025532.14	ENSMUST00000026608.11	1492	6	7	26	-5	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAACCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	130058137	130089604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130058249_130063752_130063790_130066660_130066760_130071046_130071142_130077766_130077825_130088545
ENSMUSG00000025533.16_0	chr5	-	1723	16	FSM	ENSMUSG00000025533.16	ENSMUST00000160129.8	2413	16	921	-231	-10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCTGAAGGAATGATG	NA	NA	NA	NA	NA	NA	NA	NA	130052939	130040113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
ENSMUSG00000025533.16_1	chr5	-	1811	17	FSM	ENSMUSG00000025533.16	ENSMUST00000161094.8	1824	17	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATGATGGAGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	130053215	130040104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130052938_130053134
ENSMUSG00000025533.16_18	chr5	-	1378	15	FSM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGGAGCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	130052929	130040370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882
ENSMUSG00000025533.16_19	chr5	-	1325	14	ISM	ENSMUSG00000025533.16	ENST00000673518.1	1388	15	4238	10	4238	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGGAGCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	130048691	130040370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502
ENSMUSG00000025533.16_7	chr5	-	2071	18	FSM	ENSMUSG00000025533.16	ENSMUST00000159619.8	2088	18	8	9	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATATGCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	130058080	130040344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130040542_130040705_130040813_130040890_130040972_130041497_130041582_130041837_130041898_130042009_130042095_130042241_130042357_130042803_130042867_130043519_130043573_130044937_130045016_130045136_130045215_130047150_130047249_130047388_130047446_130047673_130047758_130048502_130048698_130052882_130053203_130053917_130053975_130057821
ENSMUSG00000025534.18_0	chr5	-	2653	12	FSM	ENSMUSG00000025534.18	ENSMUST00000026613.14	2687	12	10	24	10	-24	multi-exon	TRUE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATGAATCTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130031880	130017875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130018529_130018857_130018994_130022258_130022436_130024287_130024373_130026620_130026768_130026857_130027037_130027250_130027395_130028181_130028370_130028767_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025534.18_6	chr5	-	2023	4	FSM	ENSMUSG00000025534.18	ENSMUST00000111308.8	2038	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTTAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130031695	130027503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130028911_130029201_130029384_130029597_130029784_130031447
ENSMUSG00000025538.16_0	chr5	+	2252	9	FSM	ENSMUSG00000025538.16	ENSMUST00000171300.8	2264	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTCTGCCTATCACGGT	NA	NA	NA	NA	NA	NA	NA	NA	129875838	129892891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129875928_129878741_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_10	chr5	+	598	6	FSM	ENSMUSG00000025538.16	ENST00000437307.6	616	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCCAGACCGAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	129878771	129891563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129878899_129881714_129881827_129882863_129882909_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025538.16_11	chr5	+	660	7	FSM	ENSMUSG00000025538.16	ENST00000652303.1	678	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCCAGACCGAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	129878771	129891563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129878899_129881714_129881827_129882863_129882909_129883528_129883680_129887080_129887137_129888677_129888763_129891479
ENSMUSG00000025538.16_9	chr5	+	550	5	FSM	ENSMUSG00000025538.16	ENST00000395435.7	571	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGCCAGACCGAGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	129878774	129891563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129878899_129881714_129881827_129888677_129888763_129888910_129889056_129891479
ENSMUSG00000025544.14_0	chr14	+	3088	17	FSM	ENSMUSG00000025544.14	ENSMUST00000026624.11	3107	17	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2812	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTACGTTCCAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	122344461	122397009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_122344848_122361127_122361196_122363517_122363612_122370691_122370820_122374783_122374914_122377061_122377187_122378610_122378723_122379775_122379856_122380818_122380928_122382508_122382642_122384076_122384197_122385399_122385458_122387261_122387422_122388145_122388298_122389375_122389488_122392739_122392912_122396060
ENSMUSG00000025545.11_0	chr14	+	1219	8	FSM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122419120	122639639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_122419194_122548655_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_1	chr14	+	1146	7	ISM	ENSMUSG00000025545.11	ENSMUST00000026625.7	1231	8	129540	7	-59995	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTAAGCTTATGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	122548655	122639639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_122548843_122608652_122608842_122613293_122613396_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025545.11_2	chr14	+	763	5	FSM	ENSMUSG00000025545.11	ENST00000376354.5	780	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCTCATTTCACGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	122608660	122639553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_122608842_122615195_122615290_122616614_122616783_122621609_122621735_122639358
ENSMUSG00000025555.15_0	chr14	+	4870	27	FSM	ENSMUSG00000025555.15	ENSMUST00000026635.8	4885	27	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAAAACCACCACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121272979	121521145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_121273338_121339400_121339595_121444665_121444771_121456788_121456832_121460051_121460131_121468040_121468139_121471141_121471257_121472477_121472626_121474547_121474644_121476039_121476204_121477385_121477455_121479798_121479875_121480764_121481021_121492819_121493008_121494128_121494219_121495244_121495379_121505284_121505367_121509091_121509330_121510155_121510287_121512786_121512856_121512997_121513088_121513648_121513732_121513804_121513918_121514310_121514478_121517247_121517356_121518231_121518384_121519721
ENSMUSG00000025558.20_0	chr14	-	7407	54	FSM	ENSMUSG00000025558.20	ENST00000682017.1	7420	54	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTCTGGTAATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	121935769	121779578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_121780334_121780572_121781038_121783377_121783517_121783967_121784069_121787605_121787797_121792527_121792739_121796398_121796546_121798001_121798116_121799466_121799590_121813324_121813432_121815566_121815625_121817896_121818113_121818743_121818858_121820769_121820953_121821073_121821212_121823638_121823755_121829223_121829361_121831747_121831796_121832953_121833021_121835053_121835169_121837099_121837234_121842583_121842702_121844222_121844337_121844512_121844692_121846567_121846680_121847173_121847258_121847434_121847582_121856874_121856947_121858706_121858833_121859693_121859764_121860257_121860374_121862567_121862658_121863314_121863402_121864228_121864351_121864706_121864831_121865203_121865297_121865920_121865982_121866132_121866325_121866413_121866494_121871915_121872039_121872568_121872652_121876878_121877002_121877373_121877572_121878889_121879031_121880532_121880608_121889161_121889230_121890382_121890558_121894913_121895049_121896121_121896218_121897844_121897915_121899922_121900006_121905821_121905912_121918758_121918876_121935605
ENSMUSG00000025571.14_0	chr11	+	8712	22	FSM	ENSMUSG00000025571.14	ENSMUST00000026658.13	8724	22	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTGCTGTGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117545122	117654259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117545513_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632470_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ENSMUSG00000025571.14_3	chr11	+	8835	22	FSM	ENSMUSG00000025571.14	ENSMUST00000106344.8	8847	22	4	8	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTAATTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117545642	117654257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117546158_117591550_117591651_117593204_117593227_117604951_117605279_117611775_117614377_117622993_117623207_117624435_117624603_117626797_117626879_117629116_117629175_117630692_117630836_117632470_117632645_117633752_117633891_117638002_117638123_117640069_117640154_117640402_117640644_117643802_117643971_117646156_117646349_117646788_117646933_117648762_117648958_117649729_117649801_117650449_117650590_117651316
ENSMUSG00000025572.19_0	chr11	-	2856	20	FSM	ENSMUSG00000025572.19	ENSMUST00000026659.10	2865	20	6	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGTTTGTGCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	117671459	117656816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117657160_117658391_117658460_117659747_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669627_117669758_117669875_117669988_117670118_117671361
ENSMUSG00000025572.19_11	chr11	-	2173	16	FSM	ENSMUSG00000025572.19	ENST00000322914.7	2190	16	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGTGCCAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	117669854	117659750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663498_117663679_117663772_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025572.19_12	chr11	-	994	8	FSM	ENSMUSG00000025572.19	ENST00000591436.5	1009	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGAGTGCCAGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	117665174	117659750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117659827_117659931_117660109_117660218_117660353_117661294_117661371_117661516_117661613_117663772_117663925_117664188_117664345_117665047
ENSMUSG00000025572.19_28	chr11	-	1619	9	FSM	ENSMUSG00000025572.19	ENST00000589553.5	1630	9	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGAGGCCTTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	117669859	117663495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117663925_117664188_117664345_117665047_117665193_117665833_117666025_117666414_117666673_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025572.19_36	chr11	-	1127	8	FSM	ENSMUSG00000025572.19	ENST00000306591.11	1140	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAAGCAGCTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	117669858	117665050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117665193_117665833_117666025_117666414_117666673_117666879_117666977_117667063_117667170_117669069_117669229_117669530_117669578_117669731
ENSMUSG00000025574.14_0	chr11	-	1422	7	FSM	ENSMUSG00000025574.14	ENSMUST00000026661.4	1440	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGAGAACGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117716908	117706359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117706966_117707272_117707393_117707927_117708018_117712922_117713017_117715496_117715608_117716426_117716459_117716539
ENSMUSG00000025575.15_0	chr11	-	2857	5	FSM	ENSMUSG00000025575.15	ENSMUST00000106288.8	2873	5	10	6	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTTCTCTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	118309868	118297120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308481_118309755
ENSMUSG00000025575.15_3	chr11	-	4151	4	FSM	ENSMUSG00000025575.15	ENSMUST00000017620.10	4182	4	25	6	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTTCTCTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	118309887	118297120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399
ENSMUSG00000025575.15_5	chr11	-	2980	5	FSM	ENSMUSG00000025575.15	ENSMUST00000092378.10	2995	5	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGGTTCTCTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	118309839	118297120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118298921_118299506_118299711_118301678_118302338_118308399_118308633_118309755
ENSMUSG00000025576.18_0	chr11	-	2627	12	FSM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	0	9	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGAAAGCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	118501026	118380592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448_118396584_118403975_118404231_118500984
ENSMUSG00000025576.18_1	chr11	-	2580	11	ISM	ENSMUSG00000025576.18	ENST00000583458.5	2636	12	96801	9	96801	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGGAAAGCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	118404225	118380592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_118382068_118384975_118385055_118386043_118386109_118387176_118387358_118387763_118387897_118388012_118388067_118392394_118392456_118393667_118393761_118394545_118394600_118396448_118396584_118403975
ENSMUSG00000025577.8_0	chr11	+	3794	5	FSM	ENSMUSG00000025577.8	ENSMUST00000026662.8	3807	5	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTGCTGTTCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	118913799	118922095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118914007_118914083_118914128_118915000_118915067_118917275_118917382_118918724
ENSMUSG00000025578.10_0	chr11	-	3567	5	FSM	ENSMUSG00000025578.10	ENSMUST00000026663.8	3580	5	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGACACGTGTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	118931787	118927135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118930346_118930757_118930825_118930919_118930986_118931173_118931218_118931607
ENSMUSG00000025579.15_0	chr11	+	3619	20	FSM	ENSMUSG00000025579.15	ENSMUST00000106259.9	3633	20	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	119158722	119176276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119159049_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUSG00000025579.15_10	chr11	+	3295	19	ISM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	2060	4	2058	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	119160911	119176276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUSG00000025579.15_7	chr11	+	3356	20	FSM	ENSMUSG00000025579.15	ENSMUST00000026666.13	3363	20	3	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTCTCACGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	119158854	119176276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119158918_119160913_119161505_119163695_119163842_119164800_119164967_119165040_119165138_119165466_119165587_119165681_119165801_119165885_119166018_119167667_119167779_119168326_119168441_119168519_119168605_119169090_119169209_119169701_119169836_119171237_119171390_119171938_119172088_119173999_119174142_119174485_119174639_119174884_119175050_119175272_119175426_119175830
ENSMUSG00000025580.16_0	chr11	-	1498	12	FSM	ENSMUSG00000025580.16	ENSMUST00000026667.15	1509	12	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGAGTGCAGATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119190905	119179189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119179386_119179485_119179614_119179694_119179803_119183644_119183761_119184384_119184524_119184717_119184860_119185150_119185232_119185396_119185530_119186298_119186362_119186892_119186960_119188630_119188704_119190653
ENSMUSG00000025582.5_0	chr11	-	5196	5	FSM	ENSMUSG00000025582.5	ENSMUST00000026670.5	5217	5	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGAAAGACTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	119438571	119429557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119433521_119434007_119434188_119435417_119435663_119437477_119437686_119437971
ENSMUSG00000025583.16_0	chr11	+	6573	34	FSM	ENSMUSG00000025583.16	ENSMUST00000026671.13	6594	34	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGTGAGATGTCGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	119493987	119790225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119494798_119548489_119548593_119562103_119562187_119615835_119615995_119634692_119634840_119647064_119647241_119671368_119671429_119689594_119689696_119690147_119690293_119702770_119702847_119707903_119708006_119712486_119712571_119713736_119713848_119734507_119734583_119737183_119737250_119737578_119737771_119742152_119742294_119747092_119747211_119748138_119748280_119748661_119748821_119756377_119756497_119762320_119762425_119763041_119763226_119764979_119765091_119775749_119775856_119777862_119777978_119779367_119779493_119781939_119782045_119783377_119783485_119785081_119785210_119785744_119785832_119786728_119786846_119787245_119787376_119788239
ENSMUSG00000025584.18_0	chr7	+	3774	22	FSM	ENSMUSG00000025584.18	ENSMUST00000026672.8	3802	22	23	5	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTTATTTGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	80863366	80984276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80951902_80952041_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ENSMUSG00000025584.18_5	chr7	+	2521	21	FSM	ENSMUSG00000025584.18	ENST00000339708.9	2541	21	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAGCGTGATGTACACG	NA	NA	NA	NA	NA	NA	NA	NA	80863468	80983263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80863837_80930925_80930983_80932570_80932762_80941984_80942042_80942879_80942935_80945425_80945515_80950387_80950467_80956442_80956532_80958552_80958605_80958686_80958730_80964857_80964936_80966709_80966781_80967033_80967196_80968815_80968865_80969070_80969207_80970399_80970599_80973763_80973982_80975998_80976129_80977775_80977944_80982617_80982748_80983163
ENSMUSG00000025586.18_0	chr7	-	2953	11	FSM	ENSMUSG00000025586.18	ENST00000611031.4	2969	11	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGTTGTAGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81086113	80996779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950
ENSMUSG00000025586.18_4	chr7	-	1763	10	FSM	ENSMUSG00000025586.18	ENST00000616959.4	1772	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAAATAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	81021949	80997807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759
ENSMUSG00000025586.18_5	chr7	-	2052	12	FSM	ENSMUSG00000025586.18	ENST00000615198.4	2073	12	12	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATGAAAATAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	81104496	80997807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80998188_80999539_80999621_81000092_81000188_81001491_81001691_81005622_81005760_81006656_81006747_81007052_81007167_81009476_81009730_81011333_81011558_81021759_81021949_81085950_81086126_81104381
ENSMUSG00000025591.7_0	chr8	-	4314	7	FSM	ENSMUSG00000025591.7	ENSMUST00000026681.7	4328	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCTTTCTGAGTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66939163	66925775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_66929562_66930666_66930710_66932991_66933141_66934114_66934200_66935157_66935196_66936709_66936823_66939063
ENSMUSG00000025592.18_0	chrX	+	2415	12	FSM	ENSMUSG00000025592.18	ENST00000373125.9	2430	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCAGTCATTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	112207966	112745582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_112208633_112362154_112362194_112465944_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ENSMUSG00000025592.18_12	chrX	+	1751	11	FSM	ENSMUSG00000025592.18	ENST00000373131.5	1766	11	9	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCAGTCATTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	112465950	112745582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112740784_112740832_112745095
ENSMUSG00000025592.18_8	chrX	+	1706	10	FSM	ENSMUSG00000025592.18	ENST00000510272.5	1718	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCAGTCATTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	112465948	112745582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_112466058_112549590_112549723_112614405_112614565_112633941_112634115_112659967_112660104_112724539_112724689_112724813_112724962_112727319_112727467_112729645_112729712_112745095
ENSMUSG00000025597.14_5	chrX	+	2147	10	FSM	ENSMUSG00000025597.14	ENST00000373114.4	2168	10	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAAAGAGGTATTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	113384049	113468397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_113384549_113431324_113431477_113431995_113432133_113435328_113435526_113439719_113439933_113452698_113452886_113459049_113459275_113461165_113461329_113463688_113463902_113468236
ENSMUSG00000025602.14_0	chr9	+	3435	7	FSM	ENSMUSG00000025602.14	ENSMUST00000026693.14	3461	7	12	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGGAAGATATACATCTA	NA	NA	NA	NA	NA	NA	NA	NA	40103624	40124471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40103734_40118494_40118991_40119600_40119812_40120173_40120263_40121062_40121193_40121736_40121857_40122191
ENSMUSG00000025607.16_0	chr6	-	3868	23	ISM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	1148	11	1148	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAACTGGGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30872526	30747563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476
ENSMUSG00000025607.16_1	chr6	-	3946	24	FSM	ENSMUSG00000025607.16	ENSMUST00000048774.13	3961	24	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTGGGTTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	30873668	30747561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30748987_30749404_30749504_30749759_30749899_30750536_30750635_30786493_30786666_30787265_30787406_30787859_30787923_30788527_30788654_30789678_30789783_30790645_30790722_30792865_30793110_30793677_30793774_30801302_30801492_30802561_30802630_30803072_30803207_30835672_30835831_30836822_30836910_30838302_30838396_30840469_30840546_30862514_30862595_30867535_30867608_30871781_30871863_30872476_30872530_30873595
ENSMUSG00000025609.16_0	chr6	+	11378	18	FSM	ENSMUSG00000025609.16	ENSMUST00000026699.15	11395	18	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGACACGTGTTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	31375677	31493737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_31375890_31395865_31395936_31403648_31403792_31405071_31405161_31408074_31408185_31409873_31410067_31426430_31426509_31428453_31428520_31435889_31436003_31445065_31445279_31451233_31451456_31454861_31454992_31466269_31466418_31467376_31467492_31469579_31469720_31473603_31473707_31476821_31476877_31484559
ENSMUSG00000025610.8_0	chr16	+	731	6	FSM	ENSMUSG00000025610.8	ENST00000399926.5	740	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGGCAAATGTCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	87350203	87391413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87350231_87350354_87350484_87352789_87352899_87367185_87367248_87378017_87378134_87391125
ENSMUSG00000025610.8_2	chr16	+	705	5	FSM	ENSMUSG00000025610.8	ENSMUST00000026700.8	1652	5	138	809	138	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAAATGTCTAGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	87350355	87391415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87350484_87352789_87352899_87367185_87367248_87378017_87378134_87391125
ENSMUSG00000025612.6_0	chr16	+	5841	5	FSM	ENSMUSG00000025612.6	ENSMUST00000026703.6	5867	5	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGACTAGAGTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	87495852	87530228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87495945_87512218_87512513_87515694_87517039_87519289_87519497_87526324
ENSMUSG00000025613.14_0	chr16	-	2379	15	FSM	ENSMUSG00000025613.14	ENSMUST00000026704.14	2394	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTTAGGTGAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	87292751	87280218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288189_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUSG00000025613.14_5	chr16	-	2380	15	NIC	ENSMUSG00000025613.14	novel	2394	15	NA	NA	13	-5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTTAGGTGAACATAA	NA	NA	NA	NA	NA	NA	NA	NA	87292748	87280218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr16_-_87280954_87281691_87281812_87282467_87282633_87282721_87282794_87283123_87283240_87283320_87283409_87283482_87283550_87284421_87284601_87285694_87285833_87287208_87287271_87287372_87287554_87288185_87288340_87290594_87290675_87291224_87291316_87292616
ENSMUSG00000025616.15_0	chr16	+	3189	18	FSM	ENSMUSG00000025616.15	ENSMUST00000026710.12	3205	18	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTGTTTTATTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	87251600	87280399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266562_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUSG00000025616.15_23	chr16	+	2540	17	FSM	ENSMUSG00000025616.15	ENSMUST00000119504.8	2562	17	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATAAATTATGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	87251878	87280188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279994
ENSMUSG00000025616.15_3	chr16	+	3171	18	FSM	ENSMUSG00000025616.15	ENST00000399975.7	2930	18	-240	-1	19	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCCAAAACTTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	87251609	87280393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87251991_87255528_87255631_87258852_87259029_87261622_87261727_87263140_87263245_87266565_87266751_87267241_87267338_87268599_87268731_87268968_87269057_87269994_87270074_87271469_87271562_87272304_87272362_87273601_87273776_87276013_87276678_87277762_87277858_87278601_87278689_87279747_87279905_87279994
ENSMUSG00000025626.17_0	chrX	+	4322	11	FSM	ENSMUSG00000025626.17	ENSMUST00000078944.13	4350	11	22	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCAGGTCTGTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52001164	52045814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029101_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025626.17_2	chrX	+	4321	11	FSM	ENSMUSG00000025626.17	ENST00000625464.2	4337	11	10	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCAGGTCTGTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52001168	52045814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_52001314_52005429_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029098_52029269_52029413_52029558_52031440_52031546_52034760_52034895_52042328_52042456_52042782
ENSMUSG00000025626.17_9	chrX	+	882	7	FSM	ENSMUSG00000025626.17	ENST00000370800.4	897	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTTTTATATATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	52005437	52031552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_52005614_52006042_52006145_52020449_52020584_52020857_52020902_52029098_52029269_52029413_52029558_52031440
ENSMUSG00000025630.9_0	chrX	+	1271	9	FSM	ENSMUSG00000025630.9	ENSMUST00000026723.9	1289	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAATTCGCCACTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	52077023	52110528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_52077128_52087967_52088075_52090964_52091149_52097529_52097596_52101153_52101172_52105223_52105307_52108981_52109029_52109199_52109277_52109943
ENSMUSG00000025645.9_0	chr9	+	1508	4	FSM	ENSMUSG00000025645.9	ENSMUST00000026735.9	1526	4	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTAAAAGGTAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108911567	108921546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108911636_108918404_108918716_108919908_108920074_108920582
ENSMUSG00000025645.9_2	chr9	+	1158	3	FSM	ENSMUSG00000025645.9	ENST00000442740.1	1173	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGGGACCTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108918584	108921333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108918716_108919797_108920074_108920582
ENSMUSG00000025646.10_0	chr9	-	2552	13	FSM	ENSMUSG00000025646.10	ENSMUST00000045011.9	2572	13	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACAAGCTTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	108903181	108888823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108888977_108889330_108889581_108889696_108889778_108890177_108890270_108890599_108890737_108894195_108894868_108895033_108895161_108896084_108896187_108896820_108896979_108898346_108898466_108900785_108900957_108901674_108901806_108902822
ENSMUSG00000025647.17_0	chr9	+	1887	6	FSM	ENSMUSG00000025647.17	ENSMUST00000112059.10	1910	6	10	13	-10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAAAAACTATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	108867642	108886832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108867833_108869937_108870095_108880431_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025647.17_1	chr9	+	1818	6	FSM	ENSMUSG00000025647.17	ENSMUST00000026737.12	1834	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCGCTTCCCCTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108867662	108886786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108867833_108869937_108870095_108880434_108880522_108885045_108885162_108885354_108885574_108885717
ENSMUSG00000025648.19_0	chr9	+	3447	14	FSM	ENSMUSG00000025648.19	ENSMUST00000198140.5	3488	14	10	31	10	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	108820855	108861265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_10	chr9	+	1395	13	FSM	ENSMUSG00000025648.19	ENST00000383734.6	1409	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACCCTGACCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108820988	108859451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840373_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025648.19_18	chr9	+	1476	14	FSM	ENSMUSG00000025648.19	ENST00000416568.5	1493	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACCCTGACCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108820991	108859451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108821181_108827926_108828044_108828180_108828278_108834639_108834707_108836351_108836427_108836759_108836817_108837416_108837539_108839516_108839725_108840225_108840352_108854114_108854220_108856587_108856718_108856812_108856876_108857961_108858027_108859396
ENSMUSG00000025650.14_0	chr9	+	9239	119	FSM	ENSMUSG00000025650.14	ENSMUST00000112070.8	9250	119	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCCTTGTTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	108782657	108813936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108782705_108782811_108782901_108783397_108783579_108784262_108784423_108784510_108784605_108784696_108784859_108784959_108785124_108785197_108785328_108785429_108785547_108785628_108785776_108785860_108785978_108786054_108786205_108786281_108786411_108787159_108787304_108787391_108787518_108787630_108787775_108788304_108788425_108788558_108788703_108789003_108789130_108789232_108789380_108789581_108789705_108790019_108790167_108790413_108790549_108790622_108790770_108790847_108790985_108791224_108791352_108791433_108791581_108791667_108791841_108791932_108791969_108792052_108792080_108792170_108792216_108792285_108792349_108792955_108793028_108793117_108793154_108793288_108793325_108793480_108793553_108793654_108793733_108794117_108794145_108794225_108794280_108794368_108794432_108794505_108794566_108794646_108794683_108794878_108794924_108794994_108795031_108795370_108795416_108795503_108795540_108795639_108795673_108796061_108796095_108796239_108796294_108796372_108796433_108796525_108796562_108796672_108796754_108796838_108796875_108797073_108797119_108797371_108797444_108797662_108797708_108797944_108797972_108798168_108798199_108798329_108798402_108798490_108798527_108798601_108798638_108798726_108798808_108799018_108799055_108799422_108799486_108799569_108799615_108800520_108800557_108800626_108800663_108800769_108800866_108800979_108801016_108801106_108801143_108801260_108801309_108801594_108801631_108801757_108801881_108801966_108802168_108802259_108802296_108802374_108802429_108802576_108802646_108802719_108802765_108802880_108802944_108803132_108803178_108803488_108803525_108803640_108803677_108803831_108803877_108803990_108804024_108804096_108804160_108804277_108804314_108804393_108804475_108804600_108804670_108804790_108804827_108804893_108804936_108805104_108805150_108805238_108805284_108806147_108806184_108806266_108806327_108806432_108806541_108806710_108806783_108806888_108806925_108807020_108807081_108807185_108807231_108807417_108807454_108807565_108807602_108807678_108807736_108807888_108807961_108808281_108808354_108808562_108808599_108808866_108808948_108809274_108809329_108809592_108809647_108809723_108809787_108810129_108810193_108810295_108810413_108811367_108811446_108811537_108811592_108811741_108811791_108812401_108812435_108812586_108812674_108812856_108812986_108813085_108813281_108813569
ENSMUSG00000025650.14_14	chr9	+	9105	117	ISM	ENSMUSG00000025650.14	ENSMUST00000026740.6	9198	118	583	7	583	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCCTTGTTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	108783395	108813936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_108783579_108784262_108784423_108784510_108784605_108784696_108784859_108784959_108785124_108785197_108785328_108785429_108785547_108785628_108785776_108785860_108785978_108786054_108786205_108786281_108786411_108787159_108787304_108787391_108787518_108787630_108787775_108788304_108788425_108788558_108788703_108789003_108789130_108789232_108789380_108789581_108789705_108790019_108790167_108790413_108790549_108790622_108790770_108790847_108790985_108791224_108791352_108791433_108791581_108791667_108791841_108791932_108791969_108792052_108792080_108792170_108792216_108792285_108792349_108792955_108793028_108793117_108793154_108793288_108793325_108793480_108793553_108793654_108793733_108794117_108794145_108794225_108794280_108794368_108794432_108794505_108794566_108794646_108794683_108794878_108794924_108794994_108795031_108795370_108795416_108795503_108795540_108795639_108795673_108796061_108796095_108796239_108796294_108796372_108796433_108796525_108796562_108796672_108796754_108796838_108796875_108797073_108797119_108797371_108797444_108797662_108797708_108797944_108797972_108798168_108798199_108798329_108798402_108798490_108798527_108798601_108798638_108798726_108798808_108799018_108799055_108799422_108799486_108799569_108799615_108800520_108800557_108800626_108800663_108800769_108800866_108800979_108801016_108801106_108801143_108801260_108801309_108801594_108801631_108801757_108801881_108801966_108802168_108802259_108802296_108802374_108802429_108802576_108802646_108802719_108802765_108802880_108802944_108803132_108803178_108803488_108803525_108803640_108803677_108803831_108803877_108803990_108804024_108804096_108804160_108804277_108804314_108804393_108804475_108804600_108804670_108804790_108804827_108804893_108804936_108805104_108805150_108805238_108805284_108806147_108806184_108806266_108806327_108806432_108806541_108806710_108806783_108806888_108806925_108807020_108807081_108807185_108807231_108807417_108807454_108807565_108807602_108807678_108807736_108807888_108807961_108808281_108808354_108808562_108808599_108808866_108808948_108809274_108809329_108809592_108809647_108809723_108809787_108810129_108810193_108810295_108810413_108811367_108811446_108811537_108811592_108811741_108811791_108812401_108812435_108812586_108812674_108812856_108812986_108813085_108813281_108813569
ENSMUSG00000025650.14_9	chr9	+	9182	118	FSM	ENSMUSG00000025650.14	ENSMUST00000026740.6	9198	118	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCCTTGTTGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	108782821	108813936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108782901_108783397_108783579_108784262_108784423_108784510_108784605_108784696_108784859_108784959_108785124_108785197_108785328_108785429_108785547_108785628_108785776_108785860_108785978_108786054_108786205_108786281_108786411_108787159_108787304_108787391_108787518_108787630_108787775_108788304_108788425_108788558_108788703_108789003_108789130_108789232_108789380_108789581_108789705_108790019_108790167_108790413_108790549_108790622_108790770_108790847_108790985_108791224_108791352_108791433_108791581_108791667_108791841_108791932_108791969_108792052_108792080_108792170_108792216_108792285_108792349_108792955_108793028_108793117_108793154_108793288_108793325_108793480_108793553_108793654_108793733_108794117_108794145_108794225_108794280_108794368_108794432_108794505_108794566_108794646_108794683_108794878_108794924_108794994_108795031_108795370_108795416_108795503_108795540_108795639_108795673_108796061_108796095_108796239_108796294_108796372_108796433_108796525_108796562_108796672_108796754_108796838_108796875_108797073_108797119_108797371_108797444_108797662_108797708_108797944_108797972_108798168_108798199_108798329_108798402_108798490_108798527_108798601_108798638_108798726_108798808_108799018_108799055_108799422_108799486_108799569_108799615_108800520_108800557_108800626_108800663_108800769_108800866_108800979_108801016_108801106_108801143_108801260_108801309_108801594_108801631_108801757_108801881_108801966_108802168_108802259_108802296_108802374_108802429_108802576_108802646_108802719_108802765_108802880_108802944_108803132_108803178_108803488_108803525_108803640_108803677_108803831_108803877_108803990_108804024_108804096_108804160_108804277_108804314_108804393_108804475_108804600_108804670_108804790_108804827_108804893_108804936_108805104_108805150_108805238_108805284_108806147_108806184_108806266_108806327_108806432_108806541_108806710_108806783_108806888_108806925_108807020_108807081_108807185_108807231_108807417_108807454_108807565_108807602_108807678_108807736_108807888_108807961_108808281_108808354_108808562_108808599_108808866_108808948_108809274_108809329_108809592_108809647_108809723_108809787_108810129_108810193_108810295_108810413_108811367_108811446_108811537_108811592_108811741_108811791_108812401_108812435_108812586_108812674_108812856_108812986_108813085_108813281_108813569
ENSMUSG00000025651.15_0	chr9	+	1634	13	FSM	ENSMUSG00000025651.15	ENSMUST00000026743.14	1653	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9657	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGAACTGTGTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108765711	108778683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108765856_108766083_108766225_108771151_108771239_108773111_108773242_108773757_108773957_108774427_108774508_108776005_108776122_108776403_108776548_108776665_108776827_108776923_108777010_108777612_108777702_108778006_108778083_108778502
ENSMUSG00000025656.18_10	chrX	-	1924	10	FSM	ENSMUSG00000025656.18	ENST00000636926.1	1946	10	11	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAAAGGTACTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	94210016	94098558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94209194_94209577_94209824
ENSMUSG00000025656.18_6	chrX	-	2092	11	FSM	ENSMUSG00000025656.18	ENST00000637178.1	2115	11	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	94209612	94095498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94095761_94098548_94098618_94102422_94102667_94114778_94114911_94121044_94121175_94125083_94125317_94144562_94144743_94155960_94156153_94174441_94174622_94175493_94175546_94209194
ENSMUSG00000025658.17_0	chrX	-	5124	21	FSM	ENSMUSG00000025658.17	ENST00000644585.1	5141	21	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATTTTATAAGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	156825971	156604579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156606833_156609352_156609550_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156673078_156673169_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_16	chrX	-	3643	19	FSM	ENSMUSG00000025658.17	ENST00000643220.1	3657	19	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCAGTGTGTGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	156825926	156615953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654802_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_17	chrX	-	3281	17	FSM	ENSMUSG00000025658.17	ENST00000645074.1	3294	17	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCAGTGTGTGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	156825966	156615953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_5	chrX	-	6171	18	FSM	ENSMUSG00000025658.17	ENST00000642501.1	6184	18	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATAAATTAGACGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	156779667	156613270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516
ENSMUSG00000025658.17_6	chrX	-	6378	19	FSM	ENSMUSG00000025658.17	ENST00000645791.1	6391	19	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATAAATTAGACGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	156825966	156613270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025658.17_9	chrX	-	4181	20	FSM	ENSMUSG00000025658.17	ENST00000279451.9	4195	20	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGATCTTTTTAGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	156826225	156615873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156617070_156636090_156636632_156639555_156639657_156643564_156643633_156648825_156648898_156649586_156649661_156654640_156654814_156655100_156655150_156671393_156671609_156689665_156689878_156693112_156693247_156702741_156702889_156717635_156717705_156722991_156723052_156728292_156728413_156744249_156744292_156773103_156773192_156776726_156776930_156779516_156779681_156825772
ENSMUSG00000025665.17_0	chrX	-	3697	21	FSM	ENSMUSG00000025665.17	ENST00000262752.5	3699	21	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGATTGGACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	110355987	110297942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849_110348967_110355927
ENSMUSG00000025665.17_1	chrX	-	3634	20	ISM	ENSMUSG00000025665.17	ENST00000262752.5	3699	21	7026	0	7026	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGATTGGACATTAT	NA	NA	NA	NA	NA	NA	NA	NA	110348963	110297942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_110299609_110300774_110300916_110308277_110308396_110309904_110309982_110314374_110314537_110317152_110317312_110318341_110318432_110319029_110319153_110319546_110319678_110320231_110320335_110322401_110322461_110323234_110323324_110323534_110323606_110326794_110326938_110330608_110330647_110331366_110331474_110342310_110342391_110344013_110344095_110344883_110344966_110348849
ENSMUSG00000025666.17_0	chrX	+	3992	3	FSM	ENSMUSG00000025666.17	ENSMUST00000026760.3	4007	3	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAATGCTCTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	80114328	80141470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_80114767_80127896_80128038_80138057
ENSMUSG00000025701.13_0	chr6	-	2795	14	FSM	ENSMUSG00000025701.13	ENSMUST00000026795.13	2821	14	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAATCTAAAGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	116438126	116387050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_116387860_116389420_116389592_116390082_116390184_116390402_116390525_116390698_116390878_116391483_116391571_116392334_116392539_116397201_116397349_116400103_116400277_116401097_116401205_116404103_116404227_116425230_116425313_116431077_116431277_116437835
ENSMUSG00000025702.16_0	chr6	+	4431	8	FSM	ENSMUSG00000025702.16	ENSMUST00000079012.13	4450	8	10	9	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGAATTTTGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	116314994	116386492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116315177_116315346_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ENSMUSG00000025702.16_1	chr6	+	4593	7	FSM	ENSMUSG00000025702.16	ENSMUST00000101032.10	4611	7	9	9	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGAATTTTGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	116315002	116386492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116315452_116353653_116353825_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ENSMUSG00000025702.16_2	chr6	+	4224	7	FSM	ENSMUSG00000025702.16	ENSMUST00000203193.3	4245	7	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGGAATTTTGTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	116315030	116386492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116315177_116315346_116315452_116369484_116369536_116377997_116378084_116380380_116380562_116382595_116382744_116382985
ENSMUSG00000025722.17_0	chr7	-	2099	8	FSM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATTTATTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80551010	80540478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391_80550460_80550932
ENSMUSG00000025722.17_1	chr7	-	2020	7	ISM	ENSMUSG00000025722.17	ENSMUST00000026816.15	2114	8	559	8	559	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATTTATTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80550458	80540478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_80541658_80542723_80543090_80543396_80543562_80547670_80547736_80548250_80548340_80550095_80550185_80550391
ENSMUSG00000025724.13_0	chr7	-	1003	5	FSM	ENSMUSG00000025724.13	ENST00000559729.5	1012	5	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTGAATTCTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80597331	80565119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80584774_80584885_80597149
ENSMUSG00000025724.13_4	chr7	-	953	5	FSM	ENSMUSG00000025724.13	ENST00000558134.5	961	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAACCCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80597202	80565132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80565653_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_5	chr7	-	895	4	ISM	ENSMUSG00000025724.13	ENST00000558134.5	961	5	12323	8	12323	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAACCCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80584879	80565132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_80565653_80572848_80572969_80577484_80577635_80584774
ENSMUSG00000025724.13_6	chr7	-	1049	7	FSM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAACCCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80597202	80565132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025724.13_7	chr7	-	991	6	ISM	ENSMUSG00000025724.13	ENST00000560266.5	1057	7	12323	8	12323	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAACCCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80584879	80565132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_80565653_80565922_80565981_80572094_80572133_80572848_80572969_80577484_80577635_80584774
ENSMUSG00000025724.13_8	chr7	-	1328	6	FSM	ENSMUSG00000025724.13	ENSMUST00000026818.12	1345	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGAACCCCTTTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80597519	80565132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80565653_80565922_80565981_80572848_80572969_80577484_80577635_80584774_80584885_80597149
ENSMUSG00000025726.12_0	chr7	+	1351	13	FSM	ENSMUSG00000025726.12	ENST00000538177.5	1360	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCAAGTCTTCCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80765293	80819008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80765383_80766232_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80817713_80817796_80818711_80818811_80818914
ENSMUSG00000025726.12_13	chr7	+	1263	12	ISM	ENSMUSG00000025726.12	ENST00000538177.5	1360	13	947	0	947	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCAAGTCTTCCAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80766231	80819008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_80766322_80767348_80767441_80771794_80771979_80774615_80774758_80775908_80776023_80777459_80777538_80787909_80787991_80791711_80791793_80803147_80803274_80817713_80817796_80818711_80818811_80818914
ENSMUSG00000025728.17_0	chr17	-	3152	11	FSM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACCAGCTTGGGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	26161008	26145401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000025728.17_1	chr17	-	2979	11	FSM	ENSMUSG00000025728.17	ENSMUST00000208043.2	2987	11	0	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGAGTACCAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26161797	26145408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737_26156437_26161743
ENSMUSG00000025728.17_2	chr17	-	2918	10	ISM	ENSMUSG00000025728.17	ENSMUST00000026823.16	3173	11	4593	14	4439	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGAGTACCAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26156429	26145408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153731_26153853_26153976_26154109_26155737
ENSMUSG00000025728.17_3	chr17	-	3212	12	FSM	ENSMUSG00000025728.17	ENSMUST00000097368.10	3233	12	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGAGTACCAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26160895	26145408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26146731_26147764_26147827_26149494_26149610_26149931_26150013_26150435_26150548_26150647_26150802_26151078_26151206_26153067_26153248_26153731_26153853_26153976_26154109_26155737_26156437_26160788
ENSMUSG00000025730.15_0	chr17	-	2398	6	FSM	ENSMUSG00000025730.15	ENSMUST00000167626.8	2506	6	100	8	-46	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGAGCTTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	26138526	26101095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338
ENSMUSG00000025730.15_1	chr17	-	2451	7	FSM	ENSMUSG00000025730.15	ENSMUST00000179998.8	2456	7	0	5	0	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGCTTGTGTCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	26138616	26101092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138563
ENSMUSG00000025730.15_2	chr17	-	2454	7	FSM	ENSMUSG00000025730.15	ENSMUST00000026826.14	2466	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTGAGCTTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	26138684	26101095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26102883_26103553_26103777_26104048_26104127_26109611_26109673_26110259_26110321_26138338_26138524_26138625
ENSMUSG00000025731.17_0	chr17	+	1226	6	FSM	ENSMUSG00000025731.17	ENSMUST00000026827.16	1243	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	26094057	26096136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634_26095714_26095923
ENSMUSG00000025731.17_12	chr17	+	465	4	FSM	ENSMUSG00000025731.17	ENST00000397665.6	481	4	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGCATCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	26094516	26095962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26094701_26094933_26095097_26095634_26095714_26095923
ENSMUSG00000025731.17_3	chr17	+	1010	5	FSM	ENSMUSG00000025731.17	ENSMUST00000169308.8	1026	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTTGCTGGGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	26094483	26096136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095468_26095537_26095634
ENSMUSG00000025731.17_6	chr17	+	529	5	FSM	ENSMUSG00000025731.17	ENST00000397666.6	544	5	12	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGCATCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	26094512	26095962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26094701_26094933_26095097_26095193_26095254_26095634_26095714_26095923
ENSMUSG00000025731.17_8	chr17	+	539	5	FSM	ENSMUSG00000025731.17	ENST00000614890.4	552	5	10	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATAGCATCTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	26094510	26095962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26094701_26094933_26095097_26095468_26095537_26095634_26095714_26095923
ENSMUSG00000025732.7_0	chr17	-	730	5	FSM	ENSMUSG00000025732.7	ENSMUST00000235806.2	738	5	6	2	-6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTCGGGTGTTGGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	26087702	26082673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26082940_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUSG00000025732.7_1	chr17	-	825	5	FSM	ENSMUSG00000025732.7	ENSMUST00000026828.7	842	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTGCCCTTTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26087731	26082681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26083014_26083224_26083327_26083567_26083696_26087387_26087518_26087598
ENSMUSG00000025733.18_0	chr17	-	3173	19	FSM	ENSMUSG00000025733.18	ENSMUST00000043897.16	3189	19	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGCAATGTGACTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	26063817	26057438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26058469_26058662_26058866_26058958_26059082_26059228_26059310_26059411_26059543_26059624_26059726_26059809_26059953_26060025_26060111_26060335_26060457_26060532_26060642_26060730_26060830_26060963_26061066_26061153_26061263_26061339_26061393_26062080_26062135_26062914_26062959_26063062_26063145_26063228_26063288_26063373
ENSMUSG00000025735.14_0	chr17	-	1406	9	FSM	ENSMUSG00000025735.14	ENST00000352681.8	1416	9	2	8	2	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAGCACCAGGTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	26056101	26053446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26053520_26053648_26054031_26054110_26054172_26054250_26054352_26054443_26054557_26054718_26054868_26054942_26055168_26055384_26055547_26055961
ENSMUSG00000025736.16_0	chr17	+	2086	9	FSM	ENSMUSG00000025736.16	ENSMUST00000026832.14	2091	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCACTCTCCTGGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	26048016	26050811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26048138_26048213_26048313_26048457_26048507_26048579_26048677_26048758_26048828_26048915_26049036_26049112_26049181_26049273_26049409_26049483
ENSMUSG00000025736.16_9	chr17	+	561	5	NNC	ENSMUSG00000025736.16	novel	2268	9	NA	NA	1848	108	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTATAGGCTAGGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	26049864	26050925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_+_26049991_26050081_26050193_26050282_26050339_26050493_26050605_26050768
ENSMUSG00000025737.6_0	chr17	+	3086	9	FSM	ENSMUSG00000025737.6	ENSMUST00000026833.6	3099	9	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTTGTCACTTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	26042613	26047704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26043661_26044627_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUSG00000025737.6_3	chr17	+	2669	9	FSM	ENSMUSG00000025737.6	ENST00000647644.1	2684	9	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGCCTTCCCTAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26043134	26047556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26043661_26044375_26044806_26044925_26045599_26046008_26046128_26046208_26046331_26046401_26046507_26046626_26046968_26047127_26047313_26047388
ENSMUSG00000025738.9_0	chr17	+	3476	6	FSM	ENSMUSG00000025738.9	ENSMUST00000045692.9	3489	6	2	11	2	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGTTGTAAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	26028060	26040218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26028361_26035390_26036038_26036653_26037163_26037471_26037557_26037869_26037934_26038347
ENSMUSG00000025739.14_0	chr17	+	719	3	FSM	ENSMUSG00000025739.14	ENSMUST00000172002.8	719	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGAAGTCCCTCTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	25936144	25938380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25936252_25937640_25937773_25937900
ENSMUSG00000025742.6_0	chrX	-	3691	7	FSM	ENSMUSG00000025742.6	ENSMUST00000026839.5	3699	7	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTCTTGTCATCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	166165738	166129318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUSG00000025742.6_1	chrX	-	2279	8	FSM	ENSMUSG00000025742.6	ENST00000380668.10	2294	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTTCTTTCATAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	166165579	166129331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_166129971_166131210_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156998_166157183_166165465
ENSMUSG00000025742.6_4	chrX	-	1205	7	FSM	ENSMUSG00000025742.6	ENST00000398491.6	1217	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAACTCATCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	166165587	166131662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_166131995_166133510_166133671_166135131_166135306_166146540_166146666_166148114_166148214_166156989_166157183_166165465
ENSMUSG00000025743.15_0	chr4	+	4959	5	FSM	ENSMUSG00000025743.15	ENSMUST00000070478.4	4973	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTCGTGTGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	130519853	130553622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130520114_130544155_130544274_130545892_130546516_130548678_130548968_130549953
ENSMUSG00000025745.13_0	chr5	-	3999	20	FSM	ENSMUSG00000025745.13	ENSMUST00000156859.3	4017	20	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGACAAATGGCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	30360149	30323308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_30324959_30325042_30325189_30325685_30325801_30326335_30326532_30327147_30327217_30327618_30327760_30328605_30328693_30331562_30331735_30333797_30333933_30334818_30334929_30337237_30337295_30339055_30339175_30339976_30340100_30345946_30346050_30347716_30347837_30349156_30349296_30350232_30350367_30352343_30352415_30352977_30353020_30359879
ENSMUSG00000025746.12_0	chr5	+	2337	4	FSM	ENSMUSG00000025746.12	ENSMUST00000199183.5	2343	4	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACTGAAAGACGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	30218141	30224973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30218209_30218373_30218559_30219829_30219944_30223002
ENSMUSG00000025746.12_1	chr5	+	2250	3	ISM	ENSMUSG00000025746.12	ENSMUST00000199765.2	963	4	68	-129	68	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAGTGACTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	30218386	30224966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_30218559_30219829_30219944_30223002
ENSMUSG00000025747.13_0	chr5	-	3157	7	FSM	ENSMUSG00000025747.13	ENSMUST00000026846.11	3163	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTGTTAAGACTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	30278609	30263824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_30266132_30266965_30267038_30268233_30268410_30269082_30269185_30273463_30273639_30276631_30276706_30278358
ENSMUSG00000025757.14_0	chr3	+	9465	19	FSM	ENSMUSG00000025757.14	ENSMUST00000204702.3	9479	19	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAACCATGAGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	40699868	40750531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40700217_40705106_40705165_40707581_40707723_40711432_40711556_40714795_40714896_40715213_40715348_40721243_40721489_40721634_40721712_40722401_40722554_40723183_40723291_40724942_40725077_40726978_40727176_40733766_40733866_40735991_40736130_40738660_40738787_40739051_40739160_40739710_40739831_40741155_40741318_40743635
ENSMUSG00000025758.11_0	chr3	+	3468	16	FSM	ENSMUSG00000025758.11	ENSMUST00000026858.11	3479	16	9	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGGTTTATTGGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	40754462	40771316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760356_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_4	chr3	+	3553	16	FSM	ENSMUSG00000025758.11	ENST00000270861.10	3567	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTCCTTAACTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	40754465	40771305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40754719_40755434_40755531_40756219_40756316_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025758.11_8	chr3	+	3048	15	FSM	ENSMUSG00000025758.11	ENST00000513090.5	3066	15	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAAGCCTTTCTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	40754503	40770934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40754719_40755434_40755531_40756392_40756508_40759442_40760455_40760921_40761023_40763181_40763544_40764711_40764817_40765096_40765200_40765668_40765819_40766314_40766449_40766528_40766621_40767165_40767311_40767900_40768027_40769416_40769524_40770749
ENSMUSG00000025759.12_0	chr3	-	3140	12	FSM	ENSMUSG00000025759.12	ENSMUST00000026859.11	3151	12	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACATATGAAGAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	40801313	40772541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40788378_40788493_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUSG00000025759.12_20	chr3	-	667	5	FSM	ENSMUSG00000025759.12	ENST00000641695.1	678	5	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTATTTACTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	40789839	40781299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40781418_40785058_40785113_40786447_40786593_40788378_40788493_40789603
ENSMUSG00000025759.12_21	chr3	-	520	4	FSM	ENSMUSG00000025759.12	ENST00000641134.1	535	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTATTTACTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	40789835	40781299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40781418_40785058_40785115_40788378_40788493_40789603
ENSMUSG00000025759.12_3	chr3	-	1528	11	FSM	ENSMUSG00000025759.12	ENST00000641186.1	1546	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTAAGTTAGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	40801230	40773956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40785058_40785115_40786447_40786593_40789603_40789845_40791523_40791568_40793848_40793941_40801075
ENSMUSG00000025759.12_4	chr3	-	1023	6	FSM	ENSMUSG00000025759.12	ENST00000641147.1	1046	6	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTAAGTTAGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	40789831	40773956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40789603
ENSMUSG00000025759.12_5	chr3	-	1140	7	FSM	ENSMUSG00000025759.12	ENST00000641690.1	1160	7	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTAAGTTAGAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	40789834	40773956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40774156_40776297_40776546_40776629_40776734_40778261_40778397_40781308_40781418_40788378_40788493_40789603
ENSMUSG00000025762.17_0	chr3	+	1705	10	FSM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTTTTTAAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40905065	40932228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40905120_40916042_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ENSMUSG00000025762.17_2	chr3	+	1645	9	ISM	ENSMUSG00000025762.17	ENSMUST00000191805.7	1705	10	10976	7	10815	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCAAAATTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	40916041	40932221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_40916102_40916603_40916664_40918402_40918578_40921799_40921941_40924325_40924470_40924885_40925052_40926795_40926941_40930935_40931111_40931642
ENSMUSG00000025764.15_0	chr3	+	5466	11	FSM	ENSMUSG00000025764.15	ENSMUST00000026865.15	5481	11	6	9	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAGTGTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	41510171	41571290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41510255_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUSG00000025764.15_1	chr3	+	5550	11	FSM	ENSMUSG00000025764.15	ENSMUST00000163764.8	5584	11	28	6	28	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATTTTAAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	41517831	41571287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41518002_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUSG00000025764.15_2	chr3	+	4761	11	FSM	ENSMUSG00000025764.15	ENSMUST00000168086.7	4790	11	8	21	8	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAATAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	41519296	41570526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41519439_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904_41559427_41564237_41564356_41567557
ENSMUSG00000025764.15_3	chr3	+	3319	9	FSM	ENSMUSG00000025764.15	ENSMUST00000191952.2	3327	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGCTTGGGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	41519354	41561122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41519446_41535629_41535708_41543368_41543458_41546117_41546276_41548201_41548390_41551049_41551262_41554456_41554625_41555801_41555919_41558904
ENSMUSG00000025766.15_0	chr3	+	3448	6	FSM	ENSMUSG00000025766.15	ENSMUST00000108065.9	3452	6	4	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	41697052	41713365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41697125_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUSG00000025766.15_1	chr3	+	3565	7	FSM	ENSMUSG00000025766.15	ENSMUST00000146165.8	3574	7	0	9	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	41697052	41713365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUSG00000025766.15_2	chr3	+	3312	5	FSM	ENSMUSG00000025766.15	ENSMUST00000192193.6	3322	5	3	7	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41697055	41713367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41697125_41699130_41699248_41700982_41701164_41703107_41703169_41710483
ENSMUSG00000025766.15_4	chr3	+	3497	6	FSM	ENSMUSG00000025766.15	ENSMUST00000194346.6	744	6	24	-2777	24	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTCATATTTTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41699128	41713367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41699248_41700982_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUSG00000025766.15_5	chr3	+	3252	4	ISM	ENSMUSG00000025766.15	ENSMUST00000192193.6	3322	5	2076	0	24	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTTGTGCTGTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	41699128	41713374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_41699248_41700982_41701164_41703107_41703169_41710483
ENSMUSG00000025766.15_6	chr3	+	3356	5	FSM	ENSMUSG00000025766.15	ENSMUST00000195882.6	680	5	83	-2759	83	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCATATTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	41701002	41713365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_41701164_41703107_41703169_41708023_41708076_41708158_41708359_41710483
ENSMUSG00000025777.9_0	chr1	+	1140	7	FSM	ENSMUSG00000025777.9	ENST00000434412.3	1156	7	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGAAGTACATCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	17215736	17232296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_17215813_17217159_17217224_17227184_17227359_17228632_17228728_17230147_17230263_17231350_17231804_17232133
ENSMUSG00000025777.9_1	chr1	+	1063	6	ISM	ENSMUSG00000025777.9	ENST00000434412.3	1156	7	1430	10	1430	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGAAGTACATCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	17217160	17232296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_17217224_17227184_17227359_17228632_17228728_17230147_17230263_17231350_17231804_17232133
ENSMUSG00000025779.11_0	chr1	+	611	5	FSM	ENSMUSG00000025779.11	ENSMUST00000026881.11	632	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAAAAAACTGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	16758667	16779825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_16758844_16761907_16761998_16771018_16771148_16776396_16776450_16779662
ENSMUSG00000025781.15_0	chr2	-	1050	9	FSM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTAATAATTGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	10085234	10060832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025781.15_1	chr2	-	975	8	ISM	ENSMUSG00000025781.15	ENSMUST00000026887.14	1060	9	10699	6	10699	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTAATAATTGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	10074539	10060832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_10060973_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503
ENSMUSG00000025781.15_4	chr2	-	1145	10	FSM	ENSMUSG00000025781.15	ENSMUST00000114897.9	1166	10	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	4208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAGAAAATCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	10085312	10060852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_10060973_10061580_10061618_10063806_10063904_10064311_10064468_10068096_10068162_10068253_10068398_10068917_10069123_10073420_10073553_10074503_10074539_10085158
ENSMUSG00000025782.13_0	chr2	-	4780	7	FSM	ENSMUSG00000025782.13	ENSMUST00000026888.11	4792	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTTTCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	10053396	9919363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924_9957757_10047237_10047481_10053045
ENSMUSG00000025782.13_1	chr2	-	4884	5	FSM	ENSMUSG00000025782.13	ENSMUST00000114909.2	4897	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTGCTTTTCCATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	9958455	9919364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_9921278_9922913_9923021_9925862_9926113_9945737_9945821_9955924
ENSMUSG00000025785.6_1	chr9	+	1046	8	FSM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	122942285	122965193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122942388_122947955_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUSG00000025785.6_8	chr9	+	946	7	ISM	ENSMUSG00000025785.6	ENSMUST00000026891.5	1053	8	5674	1	5674	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGTGTTGTTAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	122947953	122965193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_122948058_122948305_122948401_122956870_122957037_122959588_122959660_122959891_122960016_122960949_122961106_122964963
ENSMUSG00000025786.18_0	chr9	-	5364	7	FSM	ENSMUSG00000025786.18	ENSMUST00000238520.2	5376	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCATCTTGCCAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	122942206	122895230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122899684_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ENSMUSG00000025786.18_2	chr9	-	6967	7	FSM	ENSMUSG00000025786.18	ENSMUST00000147563.9	6987	7	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAATGTAATACAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	122942258	122901382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122907387_122909415_122909547_122912609_122912692_122913278_122913376_122918096_122918222_122929327_122929658_122942060
ENSMUSG00000025786.18_7	chr9	-	941	6	FSM	ENSMUSG00000025786.18	ENST00000506315.1	960	6	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACCCTGACCAGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	122929616	122907228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122907387_122909415_122909591_122912594_122912692_122913278_122913376_122918096_122918222_122929327
ENSMUSG00000025789.10_0	chr7	-	5312	6	FSM	ENSMUSG00000025789.10	ENSMUST00000026896.10	5368	6	50	6	50	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAATCTTGGGTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73663372	73588872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73626405_73626469_73663144
ENSMUSG00000025789.10_1	chr7	-	1073	5	FSM	ENSMUSG00000025789.10	ENST00000539113.5	1089	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAAGGAGGACAGCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	73663256	73592932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73593213_73610439_73610734_73616488_73616747_73621665_73621795_73663144
ENSMUSG00000025790.15_0	chr7	-	2684	11	FSM	ENSMUSG00000025790.15	ENSMUST00000098371.9	2709	11	19	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTCCCTGTCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	74204362	73925172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73925837_73934174_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ENSMUSG00000025790.15_1	chr7	-	4577	10	FSM	ENSMUSG00000025790.15	ENSMUST00000026897.14	4589	10	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTTCCATGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74204350	73931605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73934418_73946968_73947034_73952869_73953046_73968206_73968346_73970232_73970432_73977607_73977773_73996395_73996660_74009568_74009668_74153924_74154391_74204158
ENSMUSG00000025791.19_0	chr4	+	2355	11	FSM	ENSMUSG00000025791.19	ENSMUST00000058351.16	2371	11	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGTTGCCTGTTGTCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	99786620	99844485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841301_99843871
ENSMUSG00000025791.19_16	chr4	+	2091	11	FSM	ENSMUSG00000025791.19	ENST00000650546.1	2102	11	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGTGAGATGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99786766	99844394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99787009_99818652_99818816_99819240_99819388_99820714_99820841_99821871_99822063_99824255_99824411_99827183_99827300_99836061_99836198_99839080_99839265_99841165_99841274_99843871
ENSMUSG00000025792.10_0	chr11	+	2012	11	FSM	ENSMUSG00000025792.10	ENSMUST00000026899.4	2023	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTGGGGGCTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120382675	120390012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387933_120388209_120388288_120388745_120388803_120388896
ENSMUSG00000025792.10_7	chr11	+	876	11	FSM	ENSMUSG00000025792.10	ENST00000331531.9	891	11	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGCCAACCACCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	120382814	120388983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120382903_120385302_120385423_120385785_120385901_120385985_120386035_120386271_120386314_120387248_120387293_120387461_120387533_120387839_120387952_120388196_120388288_120388745_120388803_120388896
ENSMUSG00000025793.18_0	chr11	+	2884	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106205.9	2900	22	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAACTCTCATGATT	NA	NA	NA	NA	NA	NA	NA	NA	120358467	120374796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369915_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUSG00000025793.18_1	chr11	+	2886	22	FSM	ENSMUSG00000025793.18	ENSMUST00000106203.9	2903	22	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAACTCTCATGATT	NA	NA	NA	NA	NA	NA	NA	NA	120358468	120374796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120358590_120359834_120359920_120360425_120360502_120360860_120360954_120362305_120362430_120363428_120363482_120365081_120365151_120365945_120366071_120367954_120368034_120368114_120368214_120368344_120368441_120369161_120369201_120369287_120369432_120369520_120369581_120369912_120370124_120370378_120370552_120370624_120370766_120370849_120371025_120373355_120373490_120373569_120373690_120373840_120373928_120374214
ENSMUSG00000025794.10_0	chr9	+	994	6	FSM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATGAACCATAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	120400517	120403713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120400608_120401161_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025794.10_12	chr9	+	905	5	ISM	ENSMUSG00000025794.10	ENSMUST00000165532.3	1009	6	651	7	0	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGATGAACCATAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	120401160	120403713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403160
ENSMUSG00000025794.10_13	chr9	+	672	5	FSM	ENSMUSG00000025794.10	ENST00000416518.1	682	5	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGGTAAATCTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	120401168	120403490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120401264_120401833_120401929_120402641_120402742_120402829_120402884_120403162
ENSMUSG00000025795.9_0	chr10	-	3501	5	FSM	ENSMUSG00000025795.9	ENSMUST00000026902.9	3522	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGATAAATTTGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	121312241	121246264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121248991_121250262_121250373_121251970_121252194_121252989_121253098_121311907
ENSMUSG00000025809.16_0	chr8	+	3797	16	FSM	ENSMUSG00000025809.16	ENSMUST00000090006.12	3815	16	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGATTTGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	129412144	129459673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129412441_129431893_129431961_129433554_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025809.16_16	chr8	+	3468	14	FSM	ENSMUSG00000025809.16	ENST00000676659.1	3485	14	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATTAAAATAAAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	129433556	129459645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452732_129458503
ENSMUSG00000025809.16_20	chr8	+	3556	15	FSM	ENSMUSG00000025809.16	ENST00000423113.5	3566	15	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTATGTGTTAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	129433557	129459717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129433641_129436733_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129453463_129453545_129458503
ENSMUSG00000025809.16_26	chr8	+	3464	14	FSM	ENSMUSG00000025809.16	ENST00000678591.1	3472	14	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTATGTGTTAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	129433555	129459717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129433641_129436746_129436957_129439688_129439860_129440407_129440647_129442602_129442759_129443687_129443784_129444065_129444156_129446472_129446614_129446755_129446956_129448864_129449104_129449290_129449514_129450676_129450910_129452500_129452668_129458503
ENSMUSG00000025810.10_0	chr8	+	3571	17	FSM	ENSMUSG00000025810.10	ENSMUST00000026917.10	3597	17	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAACGAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129085774	129229828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129086114_129089699_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092_129187238_129194827_129195160_129202630_129202776_129207365_129207471_129214377_129214438_129219507_129219646_129224300_129224573_129224985_129225083_129227102_129227154_129229005
ENSMUSG00000025810.10_9	chr8	+	1945	11	FSM	ENSMUSG00000025810.10	ENST00000374821.9	1965	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTATCAAAATCTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	129085912	129214435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129086114_129089699_129089875_129145193_129145376_129152222_129152451_129158372_129158529_129160689_129160857_129184337_129184494_129187092_129187238_129194827_129195160_129202630_129202776_129214377
ENSMUSG00000025812.19_1	chr8	+	4806	25	FSM	ENSMUSG00000025812.19	ENST00000545693.5	4814	25	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790835	128338767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_17	chr8	+	4824	26	FSM	ENSMUSG00000025812.19	ENST00000374788.8	4832	26	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790855	128338766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_20	chr8	+	4831	26	FSM	ENSMUSG00000025812.19	ENST00000374789.8	4841	26	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790857	128338766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128106945_128106985_128114990_128115180_128115808_128115980_128125080_128125241_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_25	chr8	+	4654	24	FSM	ENSMUSG00000025812.19	ENST00000374790.8	4661	24	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790854	128338766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_33	chr8	+	4498	22	FSM	ENSMUSG00000025812.19	ENST00000374794.8	4505	22	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790854	128338766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136189_128142050_128142279_128153002_128153235_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025812.19_8	chr8	+	4696	25	FSM	ENSMUSG00000025812.19	ENST00000350537.9	4703	25	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTGTGTCTCTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	127790854	128338766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127791224_127887959_127888062_128003501_128003683_128032810_128032990_128050521_128050654_128083755_128083848_128086207_128086292_128096728_128096855_128097976_128098360_128103224_128103365_128104666_128104796_128114990_128115180_128115808_128115980_128125080_128125232_128131855_128132046_128136036_128136099_128137209_128137255_128142050_128142279_128153002_128153235_128186754_128186866_128200859_128201097_128319541_128319663_128329539_128329668_128336912_128337390_128338329
ENSMUSG00000025815.14_0	chr2	-	5460	17	FSM	ENSMUSG00000025815.14	ENSMUST00000095147.9	5480	17	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAATAAAAATTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	5947586	5900928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5903624_5904721_5904808_5907139_5907310_5907778_5907862_5908770_5908936_5915112_5915220_5916624_5916776_5918322_5918463_5919620_5919706_5922483_5922797_5924250_5924450_5926475_5926648_5928679_5928950_5934448_5934644_5935585_5935798_5937197_5937354_5947325
ENSMUSG00000025816.16_0	chr2	-	2434	12	FSM	ENSMUSG00000025816.16	ENSMUST00000102981.10	2448	12	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTATTAAGTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	5900235	5875803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5876833_5878553_5878631_5879037_5879230_5881174_5881373_5881651_5881813_5882665_5882820_5887391_5887502_5887628_5887761_5891309_5891389_5896100_5896167_5897964_5898033_5900067
ENSMUSG00000025817.13_0	chr2	+	4726	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	6	-19	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAACAAATATTTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5849850	5876687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869271_5871164_5871219_5872899
ENSMUSG00000025817.13_1	chr2	+	4730	9	NNC	ENSMUSG00000025817.13	novel	4764	10	NA	NA	2	-16	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATATTTCAAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	5849846	5876690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_5850197_5859626_5859730_5860790_5860859_5865837_5865888_5867111_5867220_5868389_5868486_5869157_5869268_5871164_5871219_5872899
ENSMUSG00000025821.10_0	chr6	+	5556	8	FSM	ENSMUSG00000025821.10	ENSMUST00000061890.8	5573	8	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAAACCTGGTCCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	47854146	47885411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47854771_47856933_47857354_47866999_47867127_47867537_47867658_47869788_47869909_47874748_47874863_47875827_47875942_47881494
ENSMUSG00000025823.10_0	chr6	-	2384	10	FSM	ENSMUSG00000025823.10	ENSMUST00000077290.9	2399	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCATGTTGTTTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47790355	47773080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_47773838_47775298_47775533_47776119_47776277_47777871_47778024_47780364_47780524_47780638_47780845_47783439_47783579_47783939_47784146_47785108_47785278_47790150
ENSMUSG00000025825.13_0	chr5	+	940	5	FSM	ENSMUSG00000025825.13	ENSMUST00000026937.12	957	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAACCTGATTCTCGACT	NA	NA	NA	NA	NA	NA	NA	NA	113910819	113916343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113914911_113915893
ENSMUSG00000025825.13_1	chr5	+	1378	4	FSM	ENSMUSG00000025825.13	ENSMUST00000112311.8	1395	4	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTGAAGCTGTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	113910878	113915857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831
ENSMUSG00000025825.13_2	chr5	+	1097	5	FSM	ENSMUSG00000025825.13	ENSMUST00000112312.8	1116	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAATGGTTTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	113910874	113916326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_113911006_113912323_113912438_113913278_113913390_113914831_113915140_113915893
ENSMUSG00000025854.16_0	chr5	+	3572	10	FSM	ENSMUSG00000025854.16	ENSMUST00000026972.8	3582	10	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGGGACTCACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	138740278	138795832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138741981_138743555_138743735_138752383_138752463_138778941_138779035_138780748_138780865_138791961_138792143_138793005_138793116_138793228_138793311_138793790_138793851_138794862
ENSMUSG00000025856.16_0	chr5	-	2046	6	FSM	ENSMUSG00000025856.16	ENSMUST00000076095.14	2060	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACACTGGATGCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	138980782	138961772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463
ENSMUSG00000025856.16_3	chr5	-	1240	7	FSM	ENSMUSG00000025856.16	ENSMUST00000110897.8	1287	7	10	37	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAAAGAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	138981832	138962733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981488
ENSMUSG00000025856.16_4	chr5	-	1338	8	FSM	ENSMUSG00000025856.16	ENSMUST00000110896.2	1363	8	6	19	6	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAAACCACAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	138983119	138962744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138962983_138964900_138965028_138971944_138972133_138974103_138974209_138979042_138979140_138980463_138980594_138981953_138982152_138982864
ENSMUSG00000025857.11_0	chr5	+	3434	13	FSM	ENSMUSG00000025857.11	ENSMUST00000026975.11	3450	13	9	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTTGTGTGGCCATCT	NA	NA	NA	NA	NA	NA	NA	NA	139135986	139172258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139136591_139137237_139137423_139138594_139138720_139139112_139139232_139147455_139147689_139148953_139149167_139151814_139151959_139155928_139156098_139159880_139160029_139163669_139163821_139167171_139167329_139170282_139170475_139171264
ENSMUSG00000025858.13_0	chr5	+	2092	9	FSM	ENSMUSG00000025858.13	ENSMUST00000026976.12	2107	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3532	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGACTTTGCAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	139238087	139255800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139238375_139248235_139248315_139248624_139248707_139249233_139249384_139251381_139251521_139252758_139252900_139252981_139253058_139253157_139253231_139254735
ENSMUSG00000025860.16_0	chrX	+	6343	7	FSM	ENSMUSG00000025860.16	ENSMUST00000055483.10	6374	7	30	1	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATCTTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	41160231	41198532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_41160381_41183243_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUSG00000025860.16_1	chrX	+	6825	6	FSM	ENSMUSG00000025860.16	ENSMUST00000026978.7	6834	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTATCTTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	41182612	41198532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_41184150_41185489_41185590_41187680_41187760_41188713_41188757_41190872_41191074_41193667
ENSMUSG00000025862.15_0	chrX	+	6138	34	FSM	ENSMUSG00000025862.15	ENSMUST00000115073.9	6171	34	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	41238226	41366062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_41238563_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41355242_41355354_41358257_41358385_41360121_41360200_41364139
ENSMUSG00000025862.15_4	chrX	+	5794	33	FSM	ENSMUSG00000025862.15	ENSMUST00000069619.14	5825	33	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTATCTCTTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	41239608	41366062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_41239712_41290731_41290872_41294922_41295002_41299954_41300120_41306211_41306309_41309854_41309932_41312122_41312328_41313804_41313957_41315665_41315740_41317087_41317212_41318000_41318100_41318195_41318276_41322747_41322856_41323522_41323635_41325165_41325284_41325827_41325932_41335842_41335936_41336055_41336146_41336726_41336931_41338881_41338953_41339208_41339297_41339397_41339479_41341930_41342024_41342553_41342729_41345731_41345872_41346902_41347005_41348231_41348381_41349480_41349610_41351535_41351760_41354962_41355153_41358257_41358385_41360121_41360200_41364139
ENSMUSG00000025867.9_0	chr13	+	4912	4	FSM	ENSMUSG00000025867.9	ENSMUST00000026985.9	4928	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGTCCATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	54519171	54531724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54519389_54526393_54526513_54526624_54526801_54527324
ENSMUSG00000025868.7_0	chr13	+	631	2	FSM	ENSMUSG00000025868.7	ENSMUST00000026986.7	648	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTATTTCTTAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	54738031	54738966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54738233_54738536
ENSMUSG00000025869.12_0	chr13	-	1739	5	FSM	ENSMUSG00000025869.12	ENSMUST00000026987.12	1756	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTGGTAAGATGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	54737892	54732003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54733238_54733632_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025869.12_2	chr13	-	411	4	ISM	ENSMUSG00000025869.12	ENSMUST00000148222.2	790	6	76	1281	14	-1281	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCTGCCCACAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	54737795	54733629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_54733740_54736410_54736481_54737475_54737585_54737673
ENSMUSG00000025870.11_0	chr13	+	1012	4	FSM	ENSMUSG00000025870.11	ENSMUST00000026988.11	1046	4	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGATGCTCAGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	54722854	54728934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54723091_54723562_54723762_54726605_54726782_54728533
ENSMUSG00000025871.19_0	chr13	-	2711	9	FSM	ENSMUSG00000025871.19	ENSMUST00000026989.15	2727	9	9	7	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	54713239	54699037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54711997_54712086_54712327_54712435_54712994
ENSMUSG00000025871.19_13	chr13	-	881	6	FSM	ENSMUSG00000025871.19	ENST00000614420.4	889	6	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGCAACTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54709664	54700412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505
ENSMUSG00000025871.19_14	chr13	-	709	5	FSM	ENSMUSG00000025871.19	ENST00000620366.4	723	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGCAACTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54707124	54700412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010
ENSMUSG00000025871.19_16	chr13	-	1000	7	FSM	ENSMUSG00000025871.19	ENST00000393725.6	1014	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTGCAACTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54712426	54700412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327
ENSMUSG00000025871.19_21	chr13	-	872	6	ISM	ENSMUSG00000025871.19	ENST00000434580.1	910	7	2351	0	-5	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTCTGTCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54709673	54700426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010_54707134_54709505
ENSMUSG00000025871.19_30	chr13	-	910	7	FSM	ENSMUSG00000025871.19	ENST00000434580.1	910	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTCTGTCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	54712024	54700426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700705_54700851_54701010_54701118_54704339_54704465_54707010_54707134_54709505_54709685_54711997
ENSMUSG00000025871.19_4	chr13	-	2490	8	FSM	ENSMUSG00000025871.19	ENSMUST00000153065.8	2502	8	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCAGGTCTGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	54713106	54699037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54700631_54700710_54700851_54701010_54701118_54704339_54704465_54707010_54707138_54709505_54709685_54712327_54712435_54712994
ENSMUSG00000025872.6_0	chr13	-	2320	6	FSM	ENSMUSG00000025872.6	ENSMUST00000026990.6	2335	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGAGGTGTCTAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	54616651	54606653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54608051_54611284_54611386_54611494_54611657_54613992_54614198_54615638_54615796_54616353
ENSMUSG00000025873.17_0	chr13	+	4298	11	FSM	ENSMUSG00000025873.17	ENSMUST00000126071.9	4322	11	9	15	9	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAAAAAAATTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54769605	54811861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54769717_54786062_54786132_54789231_54789367_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUSG00000025873.17_11	chr13	+	1731	11	FSM	ENSMUSG00000025873.17	ENSMUST00000026991.16	1748	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGACCAAAGGAATGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	54769646	54809392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54769717_54786062_54786132_54789231_54789310_54793057_54793135_54796104_54796244_54797790_54797877_54797971_54798064_54799855_54800034_54803218_54803391_54804094_54804239_54808766
ENSMUSG00000025875.15_0	chr13	+	1565	8	FSM	ENSMUSG00000025875.15	ENSMUST00000026993.14	1585	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTGGTGGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	54937201	54944581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941007_54941179_54942865_54942992_54943223_54943272_54943778_54943896_54943969
ENSMUSG00000025875.15_1	chr13	+	786	8	FSM	ENSMUSG00000025875.15	ENST00000503045.5	801	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTGAGGCTGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	54937365	54944026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54937495_54940421_54940473_54940552_54940700_54941076_54941179_54942865_54942992_54943223_54943281_54943778_54943896_54943969
ENSMUSG00000025878.17_0	chr13	-	2908	15	FSM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGGCACAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55248094	55175701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025878.17_1	chr13	-	2922	15	FSM	ENSMUSG00000025878.17	ENSMUST00000127195.8	2936	15	7	7	2	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGGCACAGTTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55248106	55175699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223804_55224110_55224221_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025878.17_18	chr13	-	1669	13	FSM	ENSMUSG00000025878.17	ENSMUST00000099496.4	1678	13	9	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATCTTATTTCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	55248104	55176107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55225215_55225341_55233422_55233508_55240939_55241095_55248009
ENSMUSG00000025878.17_25	chr13	-	1273	10	FSM	ENSMUSG00000025878.17	ENST00000510698.2	1273	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGCTTATAGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55225267	55176148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55176532_55178738_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217571_55217621_55224114_55224221_55225215
ENSMUSG00000025878.17_26	chr13	-	1213	9	ISM	ENSMUSG00000025878.17	ENST00000510698.2	1273	10	1055	0	1055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGCTTATAGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55224212	55176148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55176532_55178738_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217571_55217621_55224114
ENSMUSG00000025878.17_3	chr13	-	2824	14	ISM	ENSMUSG00000025878.17	ENSMUST00000026997.12	2931	15	7013	9	7013	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACCAGGCACAGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55241095	55175701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55176532_55177228_55177272_55178765_55178830_55182701_55182880_55188357_55188437_55198553_55198708_55203787_55203892_55208078_55208156_55217534_55217621_55223070_55223808_55224114_55224221_55225215_55225341_55233422_55233508_55240939
ENSMUSG00000025880.12_0	chr18	+	4262	4	FSM	ENSMUSG00000025880.12	ENSMUST00000026999.10	4278	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGCATCCCTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75500607	75528998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75502640_75503965_75504020_75508944_75509020_75526897
ENSMUSG00000025880.12_1	chr18	+	1263	4	FSM	ENSMUSG00000025880.12	ENST00000589634.1	1278	4	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTCGTGTGGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	75502039	75527434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75502640_75503965_75504020_75508947_75509020_75526897
ENSMUSG00000025885.19_0	chr18	+	1124	8	FSM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGGTGAGTCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74867007	74895720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_74867060_74869216_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ENSMUSG00000025885.19_10	chr18	+	1065	7	ISM	ENSMUSG00000025885.19	ENST00000449815.2	1132	8	2216	8	2216	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCAGGTGAGTCCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74869223	74895720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_74869361_74873544_74873697_74875196_74875287_74877691_74877843_74892097_74892384_74893920_74894096_74895646
ENSMUSG00000025887.11_0	chr9	+	2633	11	FSM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGGATCATCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5345437	5373024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_5345526_5346481_5346734_5348898_5348959_5350399_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025887.11_3	chr9	+	2546	10	ISM	ENSMUSG00000025887.11	ENSMUST00000027009.11	2649	11	1051	8	977	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGGGATCATCCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5346480	5373024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_5346734_5348898_5348959_5350399_5350478_5352196_5352292_5352671_5352846_5353633_5353869_5354533_5354684_5358245_5358356_5358724_5358844_5371752
ENSMUSG00000025888.7_0	chr9	+	603	4	FSM	ENSMUSG00000025888.7	ENST00000534497.5	621	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4745	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTAAACGAAGTATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	5303005	5306761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_5303172_5303539_5303775_5306116_5306227_5306669
ENSMUSG00000025889.14_0	chr6	-	998	4	FSM	ENSMUSG00000025889.14	ENST00000618500.4	1017	4	9	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGACACAGTGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	60804582	60708492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_60709146_60710087_60710172_60792600_60792744_60804464
ENSMUSG00000025889.14_1	chr6	-	964	4	FSM	ENSMUSG00000025889.14	ENST00000345009.8	975	4	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGACACAGTGAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	60804590	60708492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_60709146_60792600_60792744_60795307_60795350_60804464
ENSMUSG00000025889.14_14	chr6	-	254	2	FSM	ENSMUSG00000025889.14	ENST00000611107.1	265	2	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTATGGCTGCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	60804578	60792603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_60792744_60804464
ENSMUSG00000025892.17_0	chr9	-	5153	16	FSM	ENSMUSG00000025892.17	ENST00000393127.6	5167	16	8	6	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAGAATGAATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	4795356	4417902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_4420317_4424206_4424455_4432772_4432888_4456004_4456253_4461905_4462105_4464113_4464485_4472011_4472219_4480177_4480289_4502373_4502479_4503561_4503730_4513222_4513382_4519485_4519540_4537634_4537820_4664767_4665008_4793809_4793969_4795186
ENSMUSG00000025893.9_0	chr9	+	2201	3	FSM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	19	11	17	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTCTGTGTAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4309851	4331721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_4309935_4316826_4317072_4329848
ENSMUSG00000025893.9_1	chr9	+	2297	4	FSM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTACATTAAACGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4309842	4331703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_4309935_4313701_4313807_4316826_4317072_4329848
ENSMUSG00000025893.9_7	chr9	+	2207	3	ISM	ENSMUSG00000025893.9	ENSMUST00000212221.2	2313	4	3865	8	3865	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTACATTAAACGATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	4313699	4331703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_4313807_4316826_4317072_4329848
ENSMUSG00000025893.9_8	chr9	+	2131	2	ISM	ENSMUSG00000025893.9	ENSMUST00000049648.9	2231	3	6992	0	6990	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGAAGGGAAAATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	4316824	4331732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_4317072_4329848
ENSMUSG00000025894.12_0	chr9	-	2825	6	FSM	ENSMUSG00000025894.12	ENSMUST00000051589.9	2843	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGAATTTTAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	4309457	4294800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_4296840_4299297_4299370_4302469_4302632_4303093_4303216_4308693_4308920_4309253
ENSMUSG00000025898.7_0	chr9	+	4425	18	FSM	ENSMUSG00000025898.7	ENSMUST00000027027.7	4446	18	15	6	15	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTAGCGATTATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3403606	3479230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_3404191_3409965_3410077_3411328_3411452_3417868_3417983_3418655_3418776_3421285_3421377_3428667_3428784_3430437_3431088_3441054_3441146_3442960_3443048_3447236_3447354_3450013_3450152_3454539_3454753_3456732_3456850_3458733_3458890_3460050_3460132_3475482_3475585_3477816
ENSMUSG00000025899.15_0	chr9	+	3585	12	FSM	ENSMUSG00000025899.15	ENSMUST00000053407.13	3603	12	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATTAAAAAAAATAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	3335491	3386925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_3335749_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUSG00000025899.15_13	chr9	+	1167	5	ISM	ENSMUSG00000025899.15	ENST00000452221.1	1267	6	2022	5	2022	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTGATCACTTATC	NA	NA	NA	NA	NA	NA	NA	NA	3347802	3385588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_3347909_3359483_3359591_3369657_3369915_3382693_3382844_3385041
ENSMUSG00000025899.15_3	chr9	+	7655	12	FSM	ENSMUSG00000025899.15	ENSMUST00000211933.2	7674	12	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGCTTTTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	3335487	3391145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_3335595_3338455_3338592_3343014_3343253_3344587_3344720_3345780_3345877_3347803_3347909_3349419_3349491_3359483_3359591_3367863_3368016_3369657_3369915_3382693_3382844_3385041
ENSMUSG00000025899.15_9	chr9	+	1253	6	FSM	ENSMUSG00000025899.15	ENST00000452221.1	1267	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTCTGATCACTTATC	NA	NA	NA	NA	NA	NA	NA	NA	3345789	3385588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_3345877_3347803_3347909_3359483_3359591_3369657_3369915_3382693_3382844_3385041
ENSMUSG00000025900.14_0	chr1	-	4310	29	FSM	ENSMUSG00000025900.14	ENST00000637698.1	4322	29	4	8	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTCATCATACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	4430533	4069785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4069841_4077878_4077961_4089292_4089372_4094958_4095114_4112110_4112331_4162839_4163004_4189890_4189936_4190237_4190297_4212834_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424_4423061_4430422
ENSMUSG00000025900.14_9	chr1	-	3358	22	FSM	ENSMUSG00000025900.14	ENST00000636932.1	3376	22	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGAAGATAACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4423053	4190177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4190297_4212834_4212990_4218034_4218187_4218834_4218968_4234077_4234165_4240427_4240628_4267756_4267865_4276882_4277061_4296833_4297047_4298665_4298843_4301265_4301368_4313352_4313486_4313639_4313672_4313765_4313843_4315253_4315330_4331749_4331829_4337691_4337844_4354988_4355122_4363148_4363236_4381492_4381657_4422132_4422305_4422424
ENSMUSG00000025903.15_0	chr1	+	2488	9	FSM	ENSMUSG00000025903.15	ENSMUST00000027036.11	2507	9	14	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATTGCTTTATATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	4878059	4916957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178_4911356_4915185
ENSMUSG00000025903.15_1	chr1	+	858	8	FSM	ENSMUSG00000025903.15	ENSMUST00000150971.8	877	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCAATTAAATTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4878061	4911499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_4878206_4878677_4878710_4898806_4898873_4900490_4900539_4902533_4902605_4907223_4907298_4909609_4909712_4911178
ENSMUSG00000025907.15_0	chr1	+	7587	24	FSM	ENSMUSG00000025907.15	ENSMUST00000027040.13	7607	24	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCAGGCTGGCCTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	6284883	6346867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_6285182_6298163_6298274_6300182_6300298_6304184_6304312_6304452_6304624_6308485_6308689_6310175_6310603_6314328_6314500_6315018_6315204_6315381_6315569_6315648_6315731_6315821_6315884_6317929_6318034_6318289_6318417_6318499_6320392_6331153_6331320_6333057_6333167_6333247_6333489_6334765_6334815_6335797_6335846_6338921_6338981_6340914_6341052_6342924_6342996_6344421
ENSMUSG00000025909.17_0	chr1	-	1746	14	FSM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATGCAAATCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8874179	8433290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025909.17_1	chr1	-	1527	13	FSM	ENSMUSG00000025909.17	ENST00000644093.1	1537	13	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATGCAAATCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8874179	8433290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025909.17_14	chr1	-	1438	16	FSM	ENSMUSG00000025909.17	ENST00000642164.1	1444	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGCCTGACAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8874179	8433691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8874140
ENSMUSG00000025909.17_16	chr1	-	1422	15	ISM	ENSMUSG00000025909.17	ENST00000517473.5	1486	16	21077	6	21047	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGCCTGACAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8853120	8433691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_8433858_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_17	chr1	-	1396	15	ISM	ENSMUSG00000025909.17	ENSMUST00000115488.3	1554	17	121917	-7	121917	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGCCTGACAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8752250	8433691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196
ENSMUSG00000025909.17_19	chr1	-	1480	16	FSM	ENSMUSG00000025909.17	ENST00000517473.5	1486	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGCCTGACAGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	8874197	8433691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_8433858_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025909.17_2	chr1	-	1480	12	ISM	ENSMUSG00000025909.17	ENST00000644093.1	1537	13	21066	10	21054	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATGCAAATCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8853113	8433290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8533617_8533690_8535660_8535778_8624948_8624988_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_3	chr1	-	1695	13	ISM	ENSMUSG00000025909.17	ENST00000643740.1	1756	14	21070	10	21058	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATGCAAATCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	8853109	8433290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_8433858_8484426_8484538_8515250_8515344_8518203_8518357_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_35	chr1	-	1135	13	ISM	ENSMUSG00000025909.17	ENST00000642826.1	1197	14	21068	13	21056	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAGGCAAAGCACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	8853111	8433723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986
ENSMUSG00000025909.17_36	chr1	-	1188	14	FSM	ENSMUSG00000025909.17	ENST00000642826.1	1197	14	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAAAGCACCTGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	8874179	8433719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_8433858_8533617_8533690_8535660_8535778_8624948_8624988_8653428_8653559_8665635_8665767_8677293_8677377_8695002_8695106_8748030_8748073_8748160_8748205_8749296_8749355_8752196_8752254_8852986_8853122_8874140
ENSMUSG00000025911.15_0	chr1	+	3208	14	FSM	ENSMUSG00000025911.15	ENSMUST00000144177.8	3239	14	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTCAAGTATTTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	9618194	9648186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_9618377_9620131_9620170_9621941_9621983_9623147_9623202_9623542_9623698_9623847_9624045_9625762_9625841_9627224_9627331_9628357_9628511_9630333_9630433_9633733_9633813_9634021_9634119_9637005_9637164_9646415
ENSMUSG00000025912.17_1	chr1	-	1682	12	FSM	ENSMUSG00000025912.17	ENST00000517885.5	1703	12	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATGCCCTACCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	9770613	9740093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_9740238_9741803_9741984_9742436_9742542_9742764_9742882_9743325_9743441_9743969_9744113_9746191_9746319_9757980_9758007_9760305_9760399_9762942_9763015_9763511_9763618_9770159
ENSMUSG00000025915.15_0	chr1	+	3702	17	FSM	ENSMUSG00000025915.15	ENSMUST00000166384.8	3706	17	4	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	9868335	9971068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_9868472_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUSG00000025915.15_2	chr1	+	3777	18	FSM	ENSMUSG00000025915.15	ENSMUST00000168907.8	3779	18	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	9868367	9971068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_9868472_9897237_9897345_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUSG00000025915.15_4	chr1	+	3674	17	ISM	ENSMUSG00000025915.15	ENSMUST00000168907.8	3779	18	28869	2	-21260	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTTGGACTATTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	9897236	9971068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_9897345_9935355_9935574_9938607_9938692_9941854_9941928_9942482_9942559_9947390_9947479_9949250_9949301_9950556_9950615_9951802_9951887_9951984_9952117_9954631_9954745_9954849_9954887_9955891_9955979_9956271_9956368_9959094_9959251_9961585_9961676_9968944
ENSMUSG00000025917.10_0	chr1	-	1681	8	FSM	ENSMUSG00000025917.10	ENSMUST00000027050.10	1698	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGAGCCCTGACTGGC	NA	NA	NA	NA	NA	NA	NA	NA	10108341	10094831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_10095289_10097327_10097477_10100823_10100936_10102563_10102650_10103482_10103549_10104232_10104362_10105153_10105389_10107894
ENSMUSG00000025920.20_0	chr1	-	3001	14	FSM	ENSMUSG00000025920.20	ENSMUST00000162751.8	3030	14	19	10	19	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAAACTGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	16589511	16298907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16300091_16301226_16301316_16415927_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ENSMUSG00000025920.20_2	chr1	-	3897	12	FSM	ENSMUSG00000025920.20	ENSMUST00000159558.8	3901	12	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTGCTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	16589435	16413634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16582153_16582236_16589396
ENSMUSG00000025920.20_3	chr1	-	3838	11	ISM	ENSMUSG00000025920.20	ENSMUST00000159558.8	3901	12	7220	4	7220	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAAGTTGCTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	16582215	16413634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16582153
ENSMUSG00000025920.20_4	chr1	-	2882	10	ISM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	9831	15	9802	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTTTAAACAAAAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	16579633	16414529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565
ENSMUSG00000025920.20_6	chr1	-	3907	12	FSM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTATGATTTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	16589471	16413709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565_16579633_16589396
ENSMUSG00000025920.20_7	chr1	-	3835	11	ISM	ENSMUSG00000025920.20	ENSMUST00000128957.9	3907	12	9836	0	9800	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGTATGATTTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	16579635	16413709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16556243_16556375_16579565
ENSMUSG00000025920.20_9	chr1	-	2953	11	FSM	ENSMUSG00000025920.20	ENSMUST00000162007.8	2964	11	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAGACTTTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	16589461	16414522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16416236_16436302_16436364_16439978_16440111_16444897_16445036_16460044_16460258_16462740_16462849_16464274_16464435_16510546_16510683_16533258_16533419_16579565_16579633_16589396
ENSMUSG00000025921.8_0	chr1	+	3576	6	FSM	ENSMUSG00000025921.8	ENSMUST00000027053.8	3587	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTGTCTTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	16176007	16203957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_16176531_16178018_16178255_16198388_16198488_16199419_16199566_16201298_16201431_16201517
ENSMUSG00000025925.15_0	chr1	+	2265	10	FSM	ENSMUSG00000025925.15	ENSMUST00000188371.7	2268	10	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAAAGCTGGCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15875871	15914275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_15876182_15877864_15877961_15883264_15883387_15886109_15886197_15889157_15889308_15889874_15889988_15901730_15901791_15903624_15903714_15908405_15908513_15913144
ENSMUSG00000025930.7_0	chr1	-	1719	2	FSM	ENSMUSG00000025930.7	ENSMUST00000027062.7	1741	2	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAAAACATGCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	14826202	14823579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_14824550_14825453
ENSMUSG00000025931.16_0	chr1	+	5324	3	FSM	ENSMUSG00000025931.16	ENSMUST00000189400.7	5330	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATTTTGGCCTACATT	NA	NA	NA	NA	NA	NA	NA	NA	20960829	21009868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_20960911_21002283_21002464_21004805
ENSMUSG00000025931.16_3	chr1	+	5243	2	ISM	ENSMUSG00000025931.16	ENSMUST00000187651.2	1463	3	9801	-3888	9801	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGATTTTGGCCTACATT	NA	NA	NA	NA	NA	NA	NA	NA	21002283	21009868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_21002464_21004805
ENSMUSG00000025932.15_0	chr1	-	4339	18	FSM	ENSMUSG00000025932.15	ENSMUST00000027066.13	4347	18	3	5	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATGCTCCTTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	14380421	14239182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ENSMUSG00000025932.15_4	chr1	-	4348	18	FSM	ENSMUSG00000025932.15	ENSMUST00000168081.9	4366	18	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGTATGCTCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	14380445	14239185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341052_14344288_14344435_14344757_14344828_14353344_14353423_14372993_14373122_14374648_14374699_14379869
ENSMUSG00000025932.15_7	chr1	-	3410	17	FSM	ENSMUSG00000025932.15	ENSMUST00000080664.14	3426	17	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCACTCAGAATGATTACC	NA	NA	NA	NA	NA	NA	NA	NA	14380335	14239897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_14241221_14249703_14249805_14253380_14253503_14253604_14253720_14254572_14254734_14254849_14254909_14279118_14279209_14299716_14299801_14301636_14301777_14322651_14322839_14323243_14323327_14340928_14341067_14344288_14344432_14344757_14344828_14353344_14353423_14374648_14374699_14379869
ENSMUSG00000025933.16_0	chr1	+	1149	5	FSM	ENSMUSG00000025933.16	ENSMUST00000027065.12	1168	5	12	7	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTAAGCCTTCTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21288810	21300384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_21289114_21295781_21295868_21296168_21296271_21296815_21296904_21299814
ENSMUSG00000025935.11_0	chr1	-	2920	11	FSM	ENSMUSG00000025935.11	ENSMUST00000027068.11	2938	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATTAAAAGATGAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	13660126	13634931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_13636621_13639694_13639856_13640162_13640307_13642026_13642132_13642227_13642299_13646591_13646677_13648323_13648383_13649673_13649791_13649913_13650036_13651246_13651311_13659823
ENSMUSG00000025937.7_0	chr1	-	4472	7	FSM	ENSMUSG00000025937.7	ENSMUST00000027071.7	4494	7	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGAGAAAATCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	13730762	13693567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_13697129_13697579_13697662_13700288_13700438_13708454_13708634_13717608_13717736_13720944_13721109_13730552
ENSMUSG00000025938.17_0	chr1	-	2593	8	FSM	ENSMUSG00000025938.17	ENST00000530307.1	2607	8	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGGAGCTTAGCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	13060718	12941885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_12942553_12946533_12946599_12949361_12949604_12951516_12951677_12964650_12964850_13009212_13009425_13014203_13014337_13059803
ENSMUSG00000025939.20_0	chr1	-	2161	6	FSM	ENSMUSG00000025939.20	ENSMUST00000117146.9	2181	6	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGCAAGCTCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16689703	16640015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16641507_16652150_16652227_16655499_16655656_16668174_16668278_16672485_16672578_16689460
ENSMUSG00000025940.7_0	chr1	+	1616	3	FSM	ENSMUSG00000025940.7	ENSMUST00000177501.2	1636	3	12	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACCATTACCCAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	16735442	16748411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_16735730_16737888_16737998_16747191
ENSMUSG00000025940.7_1	chr1	+	1695	3	FSM	ENSMUSG00000025940.7	ENSMUST00000065373.6	1710	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTAAGAGTGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	16735442	16748493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_16735730_16737891_16737998_16747191
ENSMUSG00000025949.17_5	chr1	+	1483	10	FSM	ENSMUSG00000025949.17	ENST00000308862.10	1499	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGAGTGGGTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	65229484	65263591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_65229659_65231303_65231454_65231692_65231726_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025949.17_6	chr1	+	1719	9	FSM	ENSMUSG00000025949.17	ENST00000392202.7	1728	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTGTAACAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65229483	65263859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_65229659_65231303_65231454_65241874_65242083_65244747_65244838_65255092_65255232_65258912_65259071_65261428_65261541_65262663_65262812_65263320
ENSMUSG00000025950.17_0	chr1	-	2290	9	FSM	ENSMUSG00000025950.17	ENSMUST00000097709.11	2302	9	10	2	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65218330	65197776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65218148
ENSMUSG00000025950.17_7	chr1	-	2271	9	FSM	ENSMUSG00000025950.17	ENSMUST00000169032.8	2283	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTATTATGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65225626	65197776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_65198715_65200208_65200372_65200958_65201100_65204258_65204411_65205265_65205444_65207657_65207764_65210117_65210410_65214389_65214528_65225463
ENSMUSG00000025956.11_0	chr1	-	2014	4	FSM	ENSMUSG00000025956.11	ENSMUST00000114079.9	2030	4	5	11	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGAGTACCTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	64656396	64645642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64647297_64654256_64654369_64655431_64655604_64656320
ENSMUSG00000025956.11_1	chr1	-	2608	3	FSM	ENSMUSG00000025956.11	ENSMUST00000053469.2	2666	3	54	4	54	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAGAGTACCTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	64656273	64645642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64647297_64654256_64654369_64655431
ENSMUSG00000025958.15_0	chr1	+	4997	9	FSM	ENSMUSG00000025958.15	ENSMUST00000049932.12	5009	9	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCCAAAAGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	64571967	64640404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_64572064_64590007_64590130_64597661_64597809_64598885_64598928_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUSG00000025958.15_1	chr1	+	8340	8	FSM	ENSMUSG00000025958.15	ENSMUST00000087366.11	8364	8	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGTATATGACTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64571993	64643699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_64572180_64590007_64590130_64597661_64597809_64605375_64605477_64609292_64609436_64613231_64613415_64615337_64615489_64636392
ENSMUSG00000025959.14_0	chr1	-	7648	4	FSM	ENSMUSG00000025959.14	ENSMUST00000114086.8	7662	4	11	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTCACTGTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	64160639	64068608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64074924_64081472_64081597_64117865_64118494_64160058
ENSMUSG00000025959.14_3	chr1	-	1448	4	FSM	ENSMUSG00000025959.14	ENSMUST00000055001.10	1477	4	25	4	25	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTTTAAAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	64160616	64081088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64081597_64117865_64118494_64160058_64160299_64160544
ENSMUSG00000025962.16_0	chr1	+	4483	12	FSM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTACAGTTTGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	63769775	63793814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_63769851_63770558_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUSG00000025962.16_13	chr1	+	4410	11	ISM	ENSMUSG00000025962.16	ENSMUST00000027103.7	4486	12	784	0	784	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTACAGTTTGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	63770556	63793814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_63771381_63773890_63773995_63774621_63774731_63775003_63775128_63776937_63777078_63778340_63778514_63785000_63785165_63787116_63787330_63788844_63788930_63790422_63790538_63791455
ENSMUSG00000025964.16_2	chr1	+	2645	26	FSM	ENSMUSG00000025964.16	ENST00000374415.7	2661	26	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTTCAAGTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	63485379	63631986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_63485572_63486886_63487108_63516837_63516915_63554735_63554800_63567916_63568000_63569393_63569458_63573444_63573518_63574299_63574368_63576077_63576144_63582277_63582350_63584589_63584754_63585574_63585660_63586885_63586977_63588905_63588955_63590919_63591020_63594313_63594386_63594972_63595063_63596566_63596648_63602567_63602619_63603303_63603368_63605760_63605867_63607007_63607128_63610068_63610238_63612045_63612158_63620295_63620387_63631766
ENSMUSG00000025967.17_0	chr1	+	1921	6	FSM	ENSMUSG00000025967.17	ENSMUST00000129339.8	1939	6	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5057	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATACATCACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	63215992	63219636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_63216451_63216912_63217036_63217597_63217725_63217990_63218058_63218406_63218533_63218616
ENSMUSG00000025968.17_0	chr1	-	2639	19	FSM	ENSMUSG00000025968.17	ENSMUST00000027111.15	2661	19	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTAAAAACACTGATATT	NA	NA	NA	NA	NA	NA	NA	NA	63215971	63182766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215744
ENSMUSG00000025968.17_10	chr1	-	2257	17	FSM	ENSMUSG00000025968.17	ENST00000440274.5	2258	17	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTAACTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63210067	63182807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63209208_63209301_63210007
ENSMUSG00000025968.17_11	chr1	-	2208	16	ISM	ENSMUSG00000025968.17	ENST00000423725.5	2274	17	1578	0	1578	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTAACTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63208490	63182807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387
ENSMUSG00000025968.17_12	chr1	-	2273	17	FSM	ENSMUSG00000025968.17	ENST00000423725.5	2274	17	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTAACTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63210067	63182807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63210007
ENSMUSG00000025968.17_39	chr1	-	2573	19	FSM	ENSMUSG00000025968.17	ENSMUST00000168099.9	2590	19	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGTAATATTTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	63215882	63182901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63208387_63208496_63209208_63209301_63210007_63210074_63215586
ENSMUSG00000025968.17_47	chr1	-	1876	14	ISM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	5884	9	5884	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACATTGCTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	63204184	63182954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107
ENSMUSG00000025968.17_48	chr1	-	1941	15	FSM	ENSMUSG00000025968.17	ENST00000432169.5	1951	15	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGACATTGCTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	63210067	63182954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63210007
ENSMUSG00000025968.17_9	chr1	-	2190	16	ISM	ENSMUSG00000025968.17	ENST00000440274.5	2258	17	775	0	775	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCATTAACTAGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	63209293	63182807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_63183082_63186278_63186352_63186448_63186584_63187554_63187731_63189115_63189271_63190709_63190871_63191933_63192064_63195362_63195492_63196290_63196437_63198908_63199024_63200038_63200174_63202825_63203012_63203888_63204020_63204107_63204190_63205449_63205527_63209208
ENSMUSG00000025969.16_0	chr1	+	6697	16	FSM	ENSMUSG00000025969.16	ENSMUST00000102822.9	6708	16	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATTTTTCCTACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	62742446	62857846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62854491
ENSMUSG00000025969.16_2	chr1	+	6713	16	FSM	ENSMUSG00000025969.16	ENSMUST00000075144.12	6723	16	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTCCTACATTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	62742449	62857850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825476_62854491
ENSMUSG00000025969.16_3	chr1	+	6522	16	FSM	ENSMUSG00000025969.16	ENSMUST00000114155.8	6534	16	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAACATCTGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62742865	62838466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_62743437_62758088_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824301_62825439_62825461_62834867
ENSMUSG00000025969.16_7	chr1	+	2645	14	FSM	ENSMUSG00000025969.16	ENST00000412873.2	2665	14	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATGACCGATTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62758096	62854788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_62758267_62777447_62777630_62783333_62783565_62784516_62784673_62786316_62786487_62788291_62788448_62799933_62800079_62801849_62802200_62804008_62804154_62808158_62808276_62810863_62811005_62822452_62822716_62824203_62824326_62854491
ENSMUSG00000025971.7_0	chr1	+	3518	5	FSM	ENSMUSG00000025971.7	ENSMUST00000027114.6	3540	5	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAAAGAAACTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	57445496	57457100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_57446382_57449070_57449143_57450881_57451009_57452398_57452547_57454814
ENSMUSG00000025977.16_0	chr1	-	2420	10	FSM	ENSMUSG00000025977.16	ENST00000321801.11	2440	10	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATTATATTGAACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	55399900	55308229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774
ENSMUSG00000025977.16_1	chr1	-	2695	11	FSM	ENSMUSG00000025977.16	ENST00000392296.9	2707	11	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATATTGAACAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	55401893	55308225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55385535_55385612_55388039_55388095_55394806_55394899_55399774_55399919_55401640
ENSMUSG00000025977.16_2	chr1	-	2287	8	FSM	ENSMUSG00000025977.16	ENST00000282278.12	2309	8	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATATTGAACAAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	55399894	55308225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55309825_55339245_55339345_55343656_55343786_55344834_55344883_55362808_55362881_55379631_55379760_55394806_55394899_55399774
ENSMUSG00000025978.15_0	chr1	-	3653	9	FSM	ENSMUSG00000025978.15	ENSMUST00000027121.15	3677	9	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAACACAAATATGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	55265929	55209329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55211242_55224108_55224188_55233402_55233507_55234674_55234797_55243341_55243552_55245494_55245775_55250308_55250421_55253278_55253463_55265279
ENSMUSG00000025979.14_0	chr1	+	2822	8	FSM	ENSMUSG00000025979.14	ENSMUST00000162364.8	2840	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCATCAGTTTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	55170400	55194051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55170519_55175835_55175899_55184282_55184384_55187477_55187521_55187706_55187794_55189304_55189385_55190129_55190242_55191833
ENSMUSG00000025980.15_0	chr1	-	2408	12	FSM	ENSMUSG00000025980.15	ENSMUST00000027123.15	2423	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTGGTTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55127174	55116999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55126937
ENSMUSG00000025980.15_1	chr1	-	2252	10	FSM	ENSMUSG00000025980.15	ENST00000678621.1	2268	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTGGTTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55126093	55116999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924
ENSMUSG00000025980.15_5	chr1	-	2373	12	FSM	ENSMUSG00000025980.15	ENST00000452200.6	2388	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTCTGGTTGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	55127349	55116999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55117600_55117687_55117867_55118214_55118390_55119260_55119507_55120231_55120332_55120818_55120988_55121216_55121311_55122225_55122322_55122883_55122967_55123691_55123945_55125924_55126101_55127147
ENSMUSG00000025981.14_0	chr1	+	1719	5	FSM	ENSMUSG00000025981.14	ENSMUST00000027125.7	1733	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGACCTTGGTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	55091935	55111854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55092150_55100433_55100584_55103339_55103533_55106655_55106758_55110794
ENSMUSG00000025982.14_0	chr1	-	6174	25	FSM	ENSMUSG00000025982.14	ENSMUST00000027127.14	6195	25	12	9	12	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	2597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCTAAAGTCATAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	55066628	55024336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55026652_55027097_55027315_55029461_55029735_55033488_55033621_55034524_55034646_55035975_55036088_55036170_55036354_55037196_55037419_55038785_55038912_55039173_55039321_55039400_55039547_55039802_55040074_55040170_55040258_55040541_55040722_55042262_55042365_55042451_55042650_55044960_55045083_55045329_55045543_55046638_55046877_55051260_55051432_55053641_55053722_55055534_55055650_55055937_55056043_55058392_55058560_55066497
ENSMUSG00000025983.12_1	chr1	+	3478	27	FSM	ENSMUSG00000025983.12	ENST00000389175.9	3495	27	10	7	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAGTAGATGTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	54299090	54407761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_54299247_54302602_54302824_54302932_54303112_54311636_54311706_54316812_54316930_54317869_54318000_54320888_54320933_54324693_54324787_54327993_54328102_54329860_54329986_54339464_54339643_54340158_54340228_54344022_54344141_54353300_54353376_54368115_54368224_54368641_54368705_54392154_54392284_54393777_54393948_54394845_54394940_54395822_54395993_54400150_54400278_54403576_54403772_54404053_54404123_54404206_54404369_54405291_54405379_54407072_54407193_54407459
ENSMUSG00000025986.7_0	chr1	-	5468	10	FSM	ENSMUSG00000025986.7	ENSMUST00000027131.6	5498	10	22	8	22	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTGTGTGGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46893184	46846711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_46849272_46851145_46851337_46857222_46857304_46858224_46858594_46859682_46859804_46865252_46865442_46866502_46866673_46871715_46871924_46874286_46875312_46892630
ENSMUSG00000025991.9_0	chr1	+	3323	27	ISM	ENSMUSG00000025991.9	ENST00000451903.3	3343	28	1524	3	1524	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCCGCCTAAAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	67200020	67269492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_67200117_67201739_67201836_67204540_67204731_67205527_67205686_67207399_67207529_67210007_67210153_67211814_67212026_67213461_67213661_67216067_67216245_67219229_67219349_67234301_67234444_67235696_67235763_67236163_67236228_67237459_67237642_67243666_67243862_67244290_67244359_67245914_67245991_67248754_67248833_67251561_67251670_67253175_67253266_67254568_67254740_67257010_67257086_67259661_67259761_67266282_67266343_67267394_67267508_67268547_67268678_67269406
ENSMUSG00000025993.11_0	chr1	-	3354	8	FSM	ENSMUSG00000025993.11	ENSMUST00000027137.11	3370	8	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTGTGCTGTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	45964728	45947229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_45948880_45950051_45950691_45951395_45951642_45957468_45957596_45958044_45958161_45960315_45960476_45963876_45963945_45964380
ENSMUSG00000025995.17_0	chr1	+	2930	21	FSM	ENSMUSG00000025995.17	ENSMUST00000027139.15	2953	21	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAAAATATTAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45834339	45862770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_45834765_45838175_45838306_45840320_45840387_45841198_45841290_45843036_45843162_45844536_45844608_45845832_45845953_45846830_45846920_45851200_45851360_45852204_45852265_45852349_45852466_45853700_45853877_45855636_45855795_45856422_45856604_45857329_45857425_45857981_45858078_45858648_45858819_45859290_45859351_45861607_45861755_45862042_45862135_45862467
ENSMUSG00000026000.17_0	chr1	-	4443	9	FSM	ENSMUSG00000026000.17	ENSMUST00000113979.10	4461	9	17	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCGGGTACTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67078014	67039676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653
ENSMUSG00000026000.17_1	chr1	-	4258	10	FSM	ENSMUSG00000026000.17	ENSMUST00000027149.12	4270	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGTATCGGGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	67078018	67039681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077934
ENSMUSG00000026000.17_3	chr1	-	1377	10	FSM	ENSMUSG00000026000.17	ENSMUST00000119559.8	1385	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAAGTGGTCGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	67077993	67042541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_67042717_67043497_67043571_67043948_67044126_67046026_67046210_67048386_67048534_67049069_67049206_67060016_67060225_67073282_67073401_67077653_67077751_67077930
ENSMUSG00000026003.6_0	chr1	-	1901	11	FSM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTGAGGCCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	66902427	66870003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557_66896714_66902331
ENSMUSG00000026003.6_1	chr1	-	1806	10	ISM	ENSMUSG00000026003.6	ENSMUST00000027153.6	1916	11	5722	6	5722	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTGAGGCCCTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	66896714	66870003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_66870687_66876120_66876208_66877437_66877566_66880780_66880895_66882239_66882342_66884326_66884492_66887558_66887626_66892285_66892451_66893782_66893921_66896557
ENSMUSG00000026005.16_0	chr1	+	2680	6	FSM	ENSMUSG00000026005.16	ENSMUST00000027157.10	2692	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66740001	66758964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_1	chr1	+	2702	7	FSM	ENSMUSG00000026005.16	ENSMUST00000113995.2	2713	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAACTTGAATTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	66740000	66758964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66740177_66740775_66740808_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756912
ENSMUSG00000026005.16_2	chr1	+	860	6	FSM	ENSMUSG00000026005.16	ENST00000429907.5	868	6	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTTCAAGAGGTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	66740071	66757156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756854
ENSMUSG00000026005.16_3	chr1	+	812	6	FSM	ENSMUSG00000026005.16	ENST00000435437.2	827	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATAACTACCTTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	66740074	66757173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66740188_66745604_66745685_66753735_66753876_66754271_66754407_66755117_66755205_66756916
ENSMUSG00000026012.3_0	chr1	+	4328	4	FSM	ENSMUSG00000026012.3	ENSMUST00000027165.3	4347	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACTAGATGGATTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	60785528	60812511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60785688_60802137_60802495_60804435_60804552_60808815
ENSMUSG00000026014.16_0	chr1	-	2483	13	FSM	ENSMUSG00000026014.16	ENST00000457812.5	2500	13	8	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCCCAAATGCACTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	60572558	60486085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60486797_60532696_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60564750_60565260_60566542_60566649_60572445
ENSMUSG00000026014.16_33	chr1	-	1845	13	FSM	ENSMUSG00000026014.16	ENST00000423104.5	1860	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAGGTAACACACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	60572556	60532702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60558138_60558220_60564750_60565260_60566542_60566649_60572445
ENSMUSG00000026014.16_36	chr1	-	1836	13	FSM	ENSMUSG00000026014.16	ENST00000439222.5	1854	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAGGTAACACACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	60572553	60532702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60532840_60534573_60534695_60535383_60535483_60537582_60537694_60538638_60538783_60539713_60539780_60540914_60541037_60541983_60542144_60542676_60542755_60549575_60549651_60564750_60565260_60566542_60566649_60572445
ENSMUSG00000026017.14_0	chr1	+	5450	15	FSM	ENSMUSG00000026017.14	ENSMUST00000187978.7	5463	15	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTAGTTTTTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60144514	60193111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60144587_60147241_60147360_60148380_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ENSMUSG00000026017.14_4	chr1	+	5380	14	FSM	ENSMUSG00000026017.14	ENSMUST00000180952.8	2157	14	0	-3223	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTAGTTTTTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	60147239	60193111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60147360_60148380_60148609_60164009_60164071_60165078_60165194_60167147_60167233_60171002_60171193_60175422_60175544_60178358_60178503_60180493_60180728_60183152_60183316_60185267_60185332_60186526_60186640_60186991_60187362_60189739
ENSMUSG00000026018.13_0	chr1	-	3631	11	FSM	ENSMUSG00000026018.13	ENSMUST00000027172.13	3650	11	7	12	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATAAAGCAATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60082239	60028238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226_60067396_60081955
ENSMUSG00000026018.13_1	chr1	-	3406	11	FSM	ENSMUSG00000026018.13	ENSMUST00000191251.7	3415	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAGCATAAAGCAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	60082281	60028242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226_60067406_60082228
ENSMUSG00000026018.13_3	chr1	-	3354	10	ISM	ENSMUSG00000026018.13	ENSMUST00000027172.13	3650	11	14840	16	-18	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAGCATAAAGCAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	60067406	60028242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_60030399_60036609_60036871_60042814_60042865_60045392_60045479_60046966_60047066_60049267_60049394_60052978_60053178_60054870_60054995_60061736_60061810_60067226
ENSMUSG00000026019.16_0	chr1	-	10001	13	FSM	ENSMUSG00000026019.16	ENSMUST00000027173.15	10012	13	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGGTACTGATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60137061	60108948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665
ENSMUSG00000026019.16_1	chr1	-	2843	14	FSM	ENSMUSG00000026019.16	ENSMUST00000122038.8	2850	14	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACTGTCTAGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	60137299	60116027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137203
ENSMUSG00000026019.16_2	chr1	-	3233	14	FSM	ENSMUSG00000026019.16	ENSMUST00000117438.8	3251	14	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAACTGTCTAGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	60137787	60116027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_60117401_60119677_60119751_60121195_60121329_60121449_60121556_60121667_60121809_60122913_60123000_60124869_60124916_60126204_60126360_60127199_60127316_60128410_60128518_60130178_60130274_60133590_60133686_60136665_60136887_60137301
ENSMUSG00000026020.10_0	chr1	+	1696	13	FSM	ENSMUSG00000026020.10	ENSMUST00000027174.10	1713	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAGGCAGTTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	59724145	59750662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59750429
ENSMUSG00000026020.10_10	chr1	+	332	3	ISM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	0	657	0	-657	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGATTTTGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59746160	59749811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_59746224_59748161_59748296_59749676
ENSMUSG00000026020.10_11	chr1	+	361	4	FSM	ENSMUSG00000026020.10	ENST00000564443.1	371	4	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGATGCTGAAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	59746161	59750459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59746224_59748161_59748296_59749676_59749812_59750429
ENSMUSG00000026020.10_2	chr1	+	9493	15	FSM	ENSMUSG00000026020.10	ENSMUST00000191142.7	9507	15	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCAGCGGGTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	59724181	59758203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59724386_59729644_59729722_59731495_59731549_59735136_59735259_59737481_59737619_59740043_59740109_59741971_59742107_59743221_59743368_59743782_59743910_59744751_59744916_59745791_59745927_59746161_59746224_59748161_59748296_59749653_59749812_59750429
ENSMUSG00000026021.16_0	chr1	-	1195	5	FSM	ENSMUSG00000026021.16	ENSMUST00000091374.9	1215	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATTACTGAAGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	59709983	59678602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59679428_59681576_59681649_59683675_59683754_59694616_59694692_59709838
ENSMUSG00000026021.16_5	chr1	-	265	4	FSM	ENSMUSG00000026021.16	ENST00000513479.1	275	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGGGGTCACTCGACG	NA	NA	NA	NA	NA	NA	NA	NA	59694692	59679384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59679428_59681576_59681645_59683675_59683754_59694616
ENSMUSG00000026023.17_0	chr1	+	1211	13	ISM	ENSMUSG00000026023.17	ENST00000260967.6	1233	14	0	66197	0	-8035	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGGTTAACAAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	59295961	59383493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_59296020_59296974_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920_59327045_59328817_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406
ENSMUSG00000026023.17_1	chr1	+	1232	14	FSM	ENSMUSG00000026023.17	ENST00000260967.6	1233	14	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACACAGAGGAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59295961	59449689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59296020_59296974_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920_59327045_59328817_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406_59383493_59449667
ENSMUSG00000026023.17_10	chr1	+	1167	13	ISM	ENSMUSG00000026023.17	ENST00000260967.6	1233	14	1020	1	916	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAACACAGAGGAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59296981	59449689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920_59327045_59328817_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406_59383493_59449667
ENSMUSG00000026023.17_11	chr1	+	1146	12	ISM	ENSMUSG00000026023.17	ENSMUST00000114248.3	1477	14	916	8035	916	-8035	internal_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGGGTTAACAAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	59296981	59383493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_59297116_59297861_59297957_59304762_59304843_59319727_59319823_59320567_59320631_59326920_59327045_59328817_59328939_59340353_59340448_59349954_59350019_59365829_59365879_59370017_59370158_59383406
ENSMUSG00000026024.15_104	chr1	-	5505	33	FSM	ENSMUSG00000026024.15	ENST00000680814.1	5516	33	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAACAGCAGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	59276413	59202129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59202657_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUSG00000026024.15_11	chr1	-	6171	33	FSM	ENSMUSG00000026024.15	ENST00000680759.1	6187	33	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAATGACATTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	59276414	59202111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59276313
ENSMUSG00000026024.15_152	chr1	-	4377	23	FSM	ENSMUSG00000026024.15	ENST00000681152.1	4385	23	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACACTCTCATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59276147	59219245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248277_59250289_59250648_59254260_59255181_59257085_59257241_59259533_59259612_59275531
ENSMUSG00000026024.15_9	chr1	-	6521	33	FSM	ENSMUSG00000026024.15	ENST00000680497.1	6542	33	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAAATGACATTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	59259819	59202111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59203375_59206341_59206439_59206621_59206772_59207309_59207372_59207547_59207594_59208995_59209173_59209595_59209719_59212314_59212473_59214082_59214201_59217690_59217859_59218218_59218353_59219264_59219343_59219707_59219820_59222322_59222488_59222939_59223039_59224371_59224438_59224555_59224759_59225170_59225238_59225614_59225686_59226479_59226609_59226893_59227026_59231047_59231211_59233191_59233258_59235349_59235531_59238178_59238351_59242073_59242257_59245677_59245756_59246918_59247016_59248107_59248294_59250231_59250648_59254260_59255181_59257085_59257241_59259533
ENSMUSG00000026027.14_0	chr1	+	1332	7	FSM	ENSMUSG00000026027.14	ENSMUST00000114296.8	1348	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTCCAGCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	59012690	59030665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171
ENSMUSG00000026027.14_1	chr1	+	2945	12	FSM	ENSMUSG00000026027.14	ENSMUST00000027185.11	2960	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGTTGGTTTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	59012690	59034869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59013010_59016117_59016225_59019092_59019174_59024447_59024548_59027664_59027787_59028848_59028958_59030171_59030296_59031362_59031535_59031809_59031915_59032051_59032297_59032719_59032763_59033451
ENSMUSG00000026028.13_0	chr1	-	6165	16	FSM	ENSMUSG00000026028.13	ENSMUST00000027186.12	6189	16	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGTCCTGTGTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59012573	58939615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949408_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405_58985695_59012395
ENSMUSG00000026028.13_3	chr1	-	3968	15	FSM	ENSMUSG00000026028.13	ENST00000332624.8	3982	15	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGATTTTATTGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	58985678	58941608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58943342_58945864_58945971_58947681_58947949_58949108_58949398_58950794_58950996_58951344_58951422_58954844_58954983_58957930_58958006_58958379_58958511_58960232_58960312_58960838_58961049_58962680_58962798_58965809_58965887_58974904_58975100_58985405
ENSMUSG00000026029.15_0	chr1	+	2570	9	FSM	ENSMUSG00000026029.15	ENSMUST00000027189.15	2585	9	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATAATTCTTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	58834544	58886659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58834898_58863073_58863407_58866365_58866472_58868031_58868171_58868254_58868309_58870764_58870827_58872791_58872934_58883502_58884005_58885780
ENSMUSG00000026029.15_2	chr1	+	932	4	FSM	ENSMUSG00000026029.15	ENST00000264275.9	940	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAAGTTTGGCCTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	58866372	58884003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58866472_58868031_58868171_58872740_58872934_58883502
ENSMUSG00000026029.15_8	chr1	+	772	3	FSM	ENSMUSG00000026029.15	ENST00000264274.13	783	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACAGTTCACATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58868044	58885924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58868171_58883502_58884005_58885780
ENSMUSG00000026029.15_9	chr1	+	965	4	FSM	ENSMUSG00000026029.15	ENST00000323492.11	976	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACAGTTCACATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	58868044	58885924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58868171_58872740_58872934_58883502_58884005_58885780
ENSMUSG00000026031.16_1	chr1	+	6568	10	FSM	ENSMUSG00000026031.16	ENSMUST00000114313.8	6572	10	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTCTGATGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58750718	58798039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58750752_58765464_58765892_58768214_58768321_58770310_58770447_58771411_58771486_58774816_58774872_58779421_58779472_58780123_58780206_58791497_58792006_58792942
ENSMUSG00000026031.16_3	chr1	+	1989	5	FSM	ENSMUSG00000026031.16	ENSMUST00000114309.8	2010	5	14	7	-9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTATCTCTTTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	58752466	58772379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411
ENSMUSG00000026031.16_4	chr1	+	3137	10	FSM	ENSMUSG00000026031.16	ENSMUST00000069333.8	3163	10	5	21	5	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAGAATCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58752480	58794303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58752819_58765464_58765892_58768214_58768321_58770310_58770447_58771411_58771486_58774816_58774872_58779421_58779472_58780123_58780206_58791497_58792006_58792942
ENSMUSG00000026031.16_6	chr1	+	6536	9	ISM	ENSMUSG00000026031.16	ENSMUST00000114313.8	6572	10	14745	4	-4845	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGTCTGATGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58765463	58798039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_58765892_58768214_58768321_58770310_58770447_58771411_58771486_58774816_58774872_58779421_58779472_58780123_58780206_58791497_58792006_58792942
ENSMUSG00000026031.16_7	chr1	+	827	5	FSM	ENSMUSG00000026031.16	ENST00000340870.6	842	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGCAAGGCAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	58770317	58791989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58770447_58771411_58771486_58779421_58779472_58780123_58780206_58791497
ENSMUSG00000026031.16_8	chr1	+	916	4	FSM	ENSMUSG00000026031.16	ENST00000341582.10	929	4	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGAACCCCAGACCGT	NA	NA	NA	NA	NA	NA	NA	NA	58770319	58793075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58770451_58780061_58780206_58791497_58792006_58792942
ENSMUSG00000026032.9_0	chr1	+	736	3	FSM	ENSMUSG00000026032.9	ENSMUST00000027193.9	763	3	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAACTGTAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	58625553	58635107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58625830_58630248_58630409_58634807
ENSMUSG00000026032.9_2	chr1	+	402	3	FSM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	5019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGAGAGCGCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58625808	58634959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58625899_58630248_58630409_58634807
ENSMUSG00000026032.9_6	chr1	+	312	2	ISM	ENSMUSG00000026032.9	ENST00000454214.1	419	3	4449	8	4449	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGAGAGCGCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58630248	58634959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_58630409_58634807
ENSMUSG00000026034.18_0	chr1	-	1780	13	FSM	ENSMUSG00000026034.18	ENSMUST00000034868.14	1796	13	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGTATAAAGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	58463218	58451167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58451500_58451805_58451897_58452105_58452186_58452548_58452632_58453530_58453661_58453748_58453844_58456171_58456339_58456425_58456543_58458825_58458893_58459279_58459371_58460241_58460468_58460932_58461094_58463078
ENSMUSG00000026035.16_0	chr1	-	1352	7	FSM	ENSMUSG00000026035.16	ENSMUST00000117069.8	1363	7	5	6	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATGTGAGTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58484583	58470158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58483969
ENSMUSG00000026035.16_1	chr1	-	1018	7	FSM	ENSMUSG00000026035.16	ENSMUST00000114348.8	1033	7	9	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATGTGAGTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58484584	58470158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUSG00000026035.16_2	chr1	-	885	7	FSM	ENSMUSG00000026035.16	ENSMUST00000081677.12	896	7	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACATGTGAGTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58484637	58470158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58470490_58473489_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484490
ENSMUSG00000026035.16_4	chr1	-	1174	6	FSM	ENSMUSG00000026035.16	ENSMUST00000114345.9	1175	6	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTACCAGGACATATTTG	NA	NA	NA	NA	NA	NA	NA	NA	58484527	58472945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58473609_58477502_58477571_58480001_58480096_58481683_58481759_58483747_58483799_58484304
ENSMUSG00000026036.18_0	chr1	+	3751	7	FSM	ENSMUSG00000026036.18	ENSMUST00000087521.13	3769	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAGAAAATAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	58484316	58502604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026036.18_1	chr1	+	2141	7	FSM	ENSMUSG00000026036.18	ENSMUST00000114337.8	2168	7	25	2	25	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCACCTTTCCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	58484450	58520973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58484794_58486792_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58520144
ENSMUSG00000026036.18_2	chr1	+	2083	6	FSM	ENSMUSG00000026036.18	ENSMUST00000171597.2	2098	6	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACCTTAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	58486793	58501414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58487249_58489545_58489709_58491247_58491375_58494755_58494895_58496938_58497023_58500299
ENSMUSG00000026037.15_0	chr1	-	3542	18	FSM	ENSMUSG00000026037.15	ENSMUST00000027198.12	3561	18	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCCTTTTGTAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58544255	58501935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58503450_58505153_58505273_58506809_58506872_58508826_58508999_58510098_58510246_58511463_58511561_58513967_58514101_58515592_58515703_58519409_58519509_58520118_58520313_58522801_58522863_58532015_58532048_58532819_58532910_58536534_58536625_58539399_58539544_58540481_58540586_58541000_58541050_58543930
ENSMUSG00000026039.10_0	chr1	+	4922	9	FSM	ENSMUSG00000026039.10	ENSMUST00000027202.9	4939	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATTTATTTATCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	58035137	58065049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58035472_58037254_58037381_58039122_58039299_58040376_58040455_58042052_58042139_58052665_58052902_58054517_58057143_58058747_58058902_58063942
ENSMUSG00000026042.17_0	chr1	-	6609	54	FSM	ENSMUSG00000026042.17	ENSMUST00000086430.5	6625	54	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGTATCAAGTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45542433	45413487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_45415391_45415798_45416039_45417466_45417655_45419159_45419452_45421275_45421384_45422326_45422381_45422750_45422859_45423559_45423614_45424121_45424230_45425992_45426047_45427372_45427481_45428531_45428640_45429191_45429354_45430235_45430290_45430821_45430876_45430983_45431092_45431463_45431518_45431974_45432029_45432212_45432267_45433541_45433596_45433880_45433989_45435220_45435320_45435609_45435655_45439980_45440035_45441238_45441293_45442275_45442330_45442419_45442474_45442580_45442680_45443360_45443415_45443892_45443992_45444399_45444454_45445399_45445508_45445703_45445758_45446181_45446281_45446392_45446438_45446861_45446961_45450593_45450648_45452629_45452675_45453907_45453962_45456086_45456132_45456747_45456802_45457658_45457713_45460380_45460435_45461103_45461158_45461545_45461600_45462841_45462887_45466147_45466226_45469057_45469169_45474051_45474106_45475538_45475572_45476623_45476657_45478029_45478044_45481806_45482029_45541980
ENSMUSG00000026043.19_0	chr1	+	5543	51	FSM	ENSMUSG00000026043.19	ENSMUST00000087883.13	5564	51	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	5031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGAAACATTCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	45350707	45388855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_45350993_45360656_45360857_45361101_45361153_45361565_45361680_45362882_45362958_45364519_45364574_45364964_45365019_45365730_45365785_45366748_45366803_45366969_45367024_45367592_45367647_45368036_45368082_45368212_45368267_45369262_45369308_45369714_45369769_45370265_45370365_45370676_45370722_45370837_45370937_45371132_45371187_45371294_45371403_45372124_45372179_45372722_45372822_45373166_45373221_45373373_45373473_45373756_45373811_45373920_45373975_45374294_45374349_45374887_45374942_45375819_45375865_45376400_45376500_45376585_45376694_45377117_45377172_45377733_45377788_45377869_45377924_45378518_45378573_45379033_45379142_45379414_45379469_45379789_45379844_45380025_45380188_45380297_45380406_45381282_45381391_45382415_45382470_45382553_45382662_45383125_45383180_45383618_45383727_45383956_45384011_45384111_45384220_45385007_45385303_45386279_45386468_45386795_45387039_45387760
ENSMUSG00000026047.14_0	chr1	-	2344	10	FSM	ENSMUSG00000026047.14	ENSMUST00000065767.9	2359	10	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTGGCCTCTGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	44157953	44145705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157477
ENSMUSG00000026047.14_7	chr1	-	1734	10	FSM	ENSMUSG00000026047.14	ENST00000376004.5	1752	10	11	7	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAAGGGTCTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	44157685	44146051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44146265_44146924_44147033_44149153_44149244_44149894_44150105_44151804_44152043_44152162_44152336_44153600_44153679_44153853_44154060_44156197_44156404_44157473
ENSMUSG00000026048.17_0	chr1	+	3884	15	NNC	ENSMUSG00000026048.17	novel	3907	15	NA	NA	19	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGTTTTACTATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44187025	44220413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_44187311_44196096_44196273_44197303_44197420_44197964_44198052_44200136_44200198_44200969_44201114_44203036_44203245_44205968_44207043_44212497_44212740_44213071_44213192_44213321_44213536_44214998_44215144_44217333_44217535_44218303_44218392_44219690
ENSMUSG00000026049.12_0	chr1	-	926	5	FSM	ENSMUSG00000026049.12	ENST00000376029.3	938	5	8	4	-8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTGCCTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44141609	44125776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44126224_44127635_44127688_44130520_44130752_44139007_44139082_44141487
ENSMUSG00000026049.12_1	chr1	-	1557	5	FSM	ENSMUSG00000026049.12	ENST00000376019.5	1573	5	12	4	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTGCCTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44139170	44125776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130908_44138705
ENSMUSG00000026049.12_10	chr1	-	1349	6	FSM	ENSMUSG00000026049.12	ENSMUST00000147571.8	1360	6	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTATTTCAGACTAATG	NA	NA	NA	NA	NA	NA	NA	NA	44141514	44125972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141059
ENSMUSG00000026049.12_11	chr1	-	938	6	FSM	ENSMUSG00000026049.12	ENSMUST00000150911.8	960	6	16	6	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAGTACGGTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	44141585	44126026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44141487
ENSMUSG00000026049.12_2	chr1	-	1267	8	FSM	ENSMUSG00000026049.12	ENSMUST00000027215.12	1272	8	1	4	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTGCCTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44141550	44125776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140683_44141059_44141118_44141487
ENSMUSG00000026049.12_4	chr1	-	1200	7	ISM	ENSMUSG00000026049.12	ENSMUST00000027215.12	1272	8	438	4	-281	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGGTGCCTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44141113	44125776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_44126224_44127002_44127209_44127635_44127688_44130520_44130752_44139007_44139162_44140626_44140683_44141059
ENSMUSG00000026058.12_0	chr1	+	3249	2	FSM	ENSMUSG00000026058.12	ENSMUST00000189878.2	3259	2	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACATACCTTGTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	32211813	32285953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_32212090_32282980
ENSMUSG00000026062.13_0	chr1	+	5006	12	FSM	ENSMUSG00000026062.13	ENSMUST00000027231.13	5019	12	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTAAACCAATGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	40719733	40808420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40721326_40757754_40758219_40765367_40765619_40781779_40781998_40782962_40783166_40794868_40794959_40795418_40795490_40801060_40801223_40802702_40802800_40804724_40804857_40805402_40805494_40806785
ENSMUSG00000026064.17_0	chr1	-	4221	6	FSM	ENSMUSG00000026064.17	ENSMUST00000232841.2	4236	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTCTGAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30988383	30979390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988077
ENSMUSG00000026068.12_0	chr1	+	4880	13	FSM	ENSMUSG00000026068.12	ENSMUST00000027237.12	4889	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGCTGTTTTATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	40554530	40590865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40554637_40554859_40554936_40555556_40555696_40563375_40563543_40563953_40564276_40564363_40564548_40570635_40570787_40576217_40576284_40578383_40578508_40581046_40581199_40582149_40582288_40586926_40587101_40587784
ENSMUSG00000026069.16_0	chr1	+	2656	8	FSM	ENSMUSG00000026069.16	ENSMUST00000173514.8	2661	8	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCATAATGAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40478935	40487303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40479017_40479787_40479989_40480451_40480663_40481465_40481641_40481758_40481922_40483493_40483563_40485246_40485389_40485689
ENSMUSG00000026069.16_2	chr1	+	2576	7	ISM	ENSMUSG00000026069.16	ENSMUST00000173514.8	2661	8	851	5	-1	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATCATAATGAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	40479786	40487303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_40479989_40480451_40480663_40481465_40481641_40481758_40481922_40483493_40483563_40485246_40485389_40485689
ENSMUSG00000026072.13_0	chr1	+	5815	11	FSM	ENSMUSG00000026072.13	ENSMUST00000027241.11	5819	11	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCGAGGTCTCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	40264242	40356416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40264467_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ENSMUSG00000026072.13_1	chr1	+	4828	11	FSM	ENSMUSG00000026072.13	ENSMUST00000114795.3	4832	11	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTGGTTGCTCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	40305746	40355358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40306042_40321392_40321457_40332279_40332518_40332617_40332808_40333917_40334087_40337068_40337135_40339919_40340038_40341437_40341590_40349445_40349590_40351506_40351675_40352134
ENSMUSG00000026074.16_125	chr1	+	3001	23	ISM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	60672	2	60672	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGTGAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	40001339	40063870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_13	chr1	+	4304	31	FSM	ENSMUSG00000026074.16	ENST00000425019.5	4316	31	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGACTCCACCATCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	39940148	40064119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39940447_39940668_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039783_40039910_40040589_40040752_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40050809_40051002_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_130	chr1	+	3767	23	ISM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	60671	0	60671	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	40001338	40064649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_138	chr1	+	5608	29	ISM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	60672	4	60672	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTTTACAGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	40001339	40065645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_33	chr1	+	3070	24	FSM	ENSMUSG00000026074.16	ENST00000627726.2	3072	24	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTGTGAGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	39940667	40063870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045830_40045983_40046592_40046702_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_45	chr1	+	3834	24	FSM	ENSMUSG00000026074.16	ENST00000456652.5	3835	24	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAGAAAGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	39940668	40064649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40043966_40044074_40045833_40045983_40046592_40046691_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026074.16_56	chr1	+	5675	30	FSM	ENSMUSG00000026074.16	ENST00000625522.2	5681	30	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCTTTTACAGCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	39940669	40065645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39940735_40001337_40001395_40013086_40013213_40015866_40015978_40019719_40019811_40022298_40022430_40023042_40023098_40024341_40024421_40025784_40025961_40028129_40028203_40029248_40029460_40036180_40036343_40039047_40039135_40039690_40039910_40040589_40040752_40042916_40043148_40043966_40044074_40045830_40045983_40046592_40046700_40048847_40049024_40049716_40049838_40053265_40053384_40053686_40053858_40056269_40056414_40058703_40058839_40060243_40060345_40061864_40062015_40062519_40062680_40063469_40063610_40063788
ENSMUSG00000026078.11_0	chr1	+	3897	6	FSM	ENSMUSG00000026078.11	ENSMUST00000027247.11	3914	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGATTTTATTGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	39024699	39036313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39026931_39030326_39030457_39033995_39034087_39034325_39034470_39034815_39035025_39035221
ENSMUSG00000026080.14_0	chr1	-	2958	7	FSM	ENSMUSG00000026080.14	ENSMUST00000027249.12	2975	7	7	10	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAAAGTGTATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	38937084	38902957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_38905117_38907061_38907168_38910681_38910917_38913029_38913122_38923430_38923563_38935017_38935138_38936970
ENSMUSG00000026082.12_0	chr1	-	4251	23	FSM	ENSMUSG00000026082.12	ENSMUST00000027251.12	4262	23	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGTTTTTTTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38168733	38091867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118480_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ENSMUSG00000026082.12_1	chr1	-	4249	23	NNC	ENSMUSG00000026082.12	novel	4262	23	NA	NA	0	-10	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTACAGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38168743	38091876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_38092280_38092696_38092800_38092920_38093078_38093164_38093377_38093825_38093947_38094371_38094606_38095344_38095548_38095797_38095964_38096754_38096858_38098202_38098376_38102195_38102417_38106580_38106701_38110423_38110579_38113395_38113525_38118370_38118477_38122784_38122902_38124625_38124734_38127051_38127756_38131143_38131297_38137933_38138103_38146648_38146776_38147484_38147549_38168542
ENSMUSG00000026083.13_2	chr1	+	7779	24	FSM	ENSMUSG00000026083.13	ENSMUST00000027252.8	7797	24	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1000	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACAGTAAAAGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	38037099	38094651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_38037406_38056886_38057013_38057105_38057191_38057945_38058616_38060674_38060893_38061244_38061396_38071357_38071457_38072148_38072239_38073109_38073185_38075073_38075355_38076283_38076392_38076627_38076739_38079753_38079822_38080777_38080920_38083784_38083917_38084404_38084588_38084728_38084891_38085692_38085825_38087873_38088006_38088097_38088175_38088256_38088422_38089267_38089407_38090203_38090366_38090686
ENSMUSG00000026087.12_0	chr1	+	955	6	FSM	ENSMUSG00000026087.12	ENSMUST00000027256.12	969	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTATGTAGTAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37929564	37937609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37929666_37932023_37932105_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026087.12_2	chr1	+	655	5	FSM	ENSMUSG00000026087.12	ENSMUST00000193673.6	662	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATCACTTCGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37929613	37937439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37929666_37933019_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026087.12_4	chr1	+	596	4	FSM	ENSMUSG00000026087.12	ENSMUST00000195373.2	587	4	11	-20	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATCACTTCGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	37933026	37937439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37933097_37934410_37934492_37936768_37936916_37937141
ENSMUSG00000026088.16_0	chr1	-	1215	7	FSM	ENSMUSG00000026088.16	ENSMUST00000027257.10	1231	7	11	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATTTCTGGATCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	37929481	37917973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_37918445_37918640_37918702_37920013_37920130_37920779_37920867_37921642_37921780_37924295_37924398_37929240
ENSMUSG00000026094.15_0	chr1	-	3275	8	FSM	ENSMUSG00000026094.15	ENSMUST00000027263.14	3293	8	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGAAGCTGCCTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53824373	53794672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53796930_53800140_53800321_53801747_53801797_53803190_53803318_53805079_53805225_53810768_53810982_53815675_53815839_53824232
ENSMUSG00000026095.16_0	chr1	-	2423	6	FSM	ENSMUSG00000026095.16	ENSMUST00000027264.10	2442	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTCATTGTGTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	53391898	53383781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53384139_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUSG00000026095.16_3	chr1	-	978	6	FSM	ENSMUSG00000026095.16	ENSMUST00000123519.9	983	6	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGGGTGTAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	53391906	53383803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53384139_53385738_53385921_53387604_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUSG00000026096.15_0	chr1	+	1854	8	FSM	ENSMUSG00000026096.15	ENSMUST00000027265.10	1868	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATATTGGCCTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	53352793	53365499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_53353018_53354014_53354259_53357060_53357449_53359101_53359456_53360238_53360370_53360654_53360727_53362325_53362430_53365162
ENSMUSG00000026097.10_0	chr1	+	1894	4	FSM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAGCTAAAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	53336259	53349458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_53336348_53338130_53338312_53344613_53344766_53347985
ENSMUSG00000026097.10_1	chr1	+	1805	3	ISM	ENSMUSG00000026097.10	ENSMUST00000027266.4	1910	4	1876	12	1876	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATTAGCTAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	53338129	53349456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_53338312_53344613_53344766_53347985
ENSMUSG00000026098.14_0	chr1	-	3038	13	FSM	ENSMUSG00000026098.14	ENSMUST00000027267.14	3054	13	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAAATTTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	53336170	53228354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099_53321252_53336044
ENSMUSG00000026098.14_13	chr1	-	1909	8	FSM	ENSMUSG00000026098.14	ENST00000639501.1	1925	8	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATATTAAAATAACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	53321228	53236249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53295787_53295952_53306986_53307090_53314228_53314412_53321099
ENSMUSG00000026098.14_2	chr1	-	2287	11	FSM	ENSMUSG00000026098.14	ENST00000447232.6	2305	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGGAAACTGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53321223	53228471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53306986_53307090_53314228_53314412_53321099
ENSMUSG00000026098.14_3	chr1	-	2661	11	FSM	ENSMUSG00000026098.14	ENST00000624204.3	2682	11	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGGAAACTGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53321220	53228471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53314228_53314412_53321099
ENSMUSG00000026098.14_4	chr1	-	2480	10	FSM	ENSMUSG00000026098.14	ENST00000432292.7	2499	10	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGGAAACTGATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	53321222	53228471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53228658_53231258_53231420_53234086_53234218_53235981_53236462_53245720_53246572_53246734_53246879_53247121_53247245_53255389_53255507_53295787_53295952_53321099
ENSMUSG00000026102.10_0	chr1	-	5753	6	FSM	ENSMUSG00000026102.10	ENSMUST00000027271.9	5767	6	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAATGTAAGATTATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	52856841	52824593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856560
ENSMUSG00000026102.10_1	chr1	-	1819	6	FSM	ENSMUSG00000026102.10	ENST00000322522.8	1836	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATACCAAGGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	52857026	52828602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52829377_52830846_52831022_52833628_52833830_52836199_52836261_52838443_52838696_52856670
ENSMUSG00000026103.15_0	chr1	-	4938	18	FSM	ENSMUSG00000026103.15	ENSMUST00000114513.9	4966	18	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTGAAAACAAACTATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	52272367	52202619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52205474_52207494_52207559_52207643_52207721_52208055_52208118_52227837_52227931_52228581_52228714_52230269_52230447_52235323_52235375_52235901_52235969_52238869_52238929_52239013_52239047_52246459_52246519_52251361_52251526_52253636_52253717_52254723_52254854_52258646_52258769_52259101_52259199_52271750
ENSMUSG00000026104.15_0	chr1	+	2795	23	FSM	ENSMUSG00000026104.15	ENSMUST00000186574.7	2834	23	15	24	0	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAATAAAAAAGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	52158613	52194547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144
ENSMUSG00000026104.15_14	chr1	+	3965	25	FSM	ENSMUSG00000026104.15	ENSMUST00000186057.7	3998	25	28	5	28	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCAAAATGAAATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	52158810	52199884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52158953_52159070_52159195_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187041_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ENSMUSG00000026104.15_4	chr1	+	5135	25	FSM	ENSMUSG00000026104.15	ENSMUST00000070968.14	5151	25	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGTAAGCGTAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	52158624	52201019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52158783_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ENSMUSG00000026104.15_9	chr1	+	4230	25	FSM	ENSMUSG00000026104.15	ENSMUST00000186857.7	4241	25	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATATATTTTATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	52158657	52200162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52158768_52159070_52159232_52161749_52161881_52162272_52162418_52165678_52165778_52171702_52171793_52174761_52174841_52176037_52176130_52176437_52176590_52178352_52178512_52179735_52179829_52182059_52182120_52183244_52183275_52183362_52183457_52184308_52184351_52186452_52186537_52187059_52187159_52188061_52188198_52189777_52189828_52190396_52190492_52191391_52191538_52193002_52193189_52194144_52194221_52195141_52195242_52198441
ENSMUSG00000026107.12_0	chr1	-	2811	6	FSM	ENSMUSG00000026107.12	ENSMUST00000027279.12	2838	6	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAAGATATAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	51517541	51508656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_51510571_51511487_51511540_51512164_51512241_51513692_51513765_51516636_51516776_51516983
ENSMUSG00000026109.15_0	chr1	+	2793	9	FSM	ENSMUSG00000026109.15	ENST00000272771.10	2811	9	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACTTCTTCATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	50966692	51225893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_50967279_50969707_50969818_50977371_50977530_51110626_51110724_51171301_51171451_51172217_51172278_51219410_51219535_51220895_51221055_51224543
ENSMUSG00000026109.15_4	chr1	+	3327	10	FSM	ENSMUSG00000026109.15	ENSMUST00000081851.4	3343	10	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATCATAAAGCTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	50966687	51226423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_50967279_50969707_50969818_50977371_50977502_50982355_50982383_51110626_51110724_51171301_51171451_51172217_51172278_51219410_51219535_51220895_51221055_51224543
ENSMUSG00000026111.16_0	chr1	+	1081	6	FSM	ENSMUSG00000026111.16	ENSMUST00000114925.10	1094	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGCTGTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37469227	37478060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37469364_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUSG00000026111.16_1	chr1	+	1406	6	FSM	ENSMUSG00000026111.16	ENSMUST00000027285.13	1414	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTCAGCAAGCGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	37469258	37478205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37469575_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUSG00000026111.16_5	chr1	+	1161	6	FSM	ENSMUSG00000026111.16	ENSMUST00000118059.3	1179	6	10	8	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAAAGCTGTGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37469292	37478060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37469509_37470373_37470658_37471631_37471753_37476242_37476383_37476457_37476560_37477762
ENSMUSG00000026112.8_0	chr1	-	3843	3	FSM	ENSMUSG00000026112.8	ENSMUST00000027286.7	3863	3	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACATCTTTGTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	37469172	37456172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_37459709_37467422_37467507_37468949
ENSMUSG00000026113.18_0	chr1	+	5660	26	FSM	ENSMUSG00000026113.18	ENSMUST00000027287.11	5691	26	17	14	-7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGAACATTAAACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	37338988	37449803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37339200_37396423_37396486_37396895_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411501_37413352_37413371_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37447207
ENSMUSG00000026113.18_4	chr1	+	2959	23	FSM	ENSMUSG00000026113.18	ENST00000409540.7	2978	23	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGTGTACCAAACTGGACA	NA	NA	NA	NA	NA	NA	NA	NA	37396961	37442767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37397106_37397588_37397634_37403190_37403310_37405243_37405361_37405619_37405700_37405950_37406063_37406837_37406929_37407357_37407506_37408438_37408570_37410782_37410888_37411391_37411515_37416658_37416843_37417921_37418141_37419002_37419142_37422419_37422453_37426778_37426952_37427867_37427992_37428730_37428858_37429129_37429271_37432023_37432122_37435150_37435264_37437846_37438002_37442529
ENSMUSG00000026114.15_0	chr1	+	1819	5	FSM	ENSMUSG00000026114.15	ENST00000436404.6	1846	5	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGATGAACAGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	37280927	37301102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37281022_37283913_37284099_37293037_37293146_37297073_37297181_37299777
ENSMUSG00000026116.12_0	chr1	-	6527	41	FSM	ENSMUSG00000026116.12	ENSMUST00000027290.12	6546	41	14	5	14	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGAATTGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	36978594	36831276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36832287_36833124_36833280_36833884_36833983_36834181_36834279_36834375_36834498_36835242_36835406_36838022_36838173_36838359_36838485_36840905_36841034_36843548_36843728_36846964_36847558_36847907_36848067_36849361_36849548_36850488_36850676_36851241_36851385_36851637_36851790_36854535_36854603_36854967_36855078_36855189_36855329_36857738_36857857_36857973_36858050_36858143_36858297_36862147_36862235_36863796_36863902_36864292_36864428_36864509_36864621_36866091_36866263_36866342_36866497_36867145_36867255_36868646_36868756_36872576_36872639_36873696_36873754_36873842_36873994_36877039_36877121_36879469_36879593_36880674_36880792_36893924_36894049_36911592_36911662_36920414_36920456_36928344_36928407_36978245
ENSMUSG00000026121.14_1	chr1	-	3771	15	FSM	ENSMUSG00000026121.14	ENSMUST00000191677.6	3779	15	1	7	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATATTTTGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	36597429	36587726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595162_36597096
ENSMUSG00000026121.14_2	chr1	-	3764	15	FSM	ENSMUSG00000026121.14	ENSMUST00000114991.8	3773	15	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGATATTTTGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	36597425	36587726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36589450_36589586_36589658_36589748_36589910_36590806_36590920_36591007_36591231_36591332_36591478_36591799_36591976_36592059_36592212_36592304_36592422_36592551_36592649_36592796_36592896_36593006_36593070_36593332_36593482_36595012_36595159_36597096
ENSMUSG00000026123.12_0	chr1	+	3269	8	FSM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTAAACCGTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34889073	34918652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34889145_34900953_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026123.12_1	chr1	+	3197	7	ISM	ENSMUSG00000026123.12	ENSMUST00000027297.11	3279	8	11879	12	11879	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACCTTAAACCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34900951	34918649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_34900999_34902086_34902240_34902551_34902655_34903553_34903594_34905221_34905312_34908380_34908487_34915991
ENSMUSG00000026127.14_0	chr1	+	5818	9	FSM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCAGAAAAAAAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34478934	34488422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34479009_34479121_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026127.14_3	chr1	+	5744	8	ISM	ENSMUSG00000026127.14	ENSMUST00000027303.14	5836	9	189	16	189	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCCCAGAAAAAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34479120	34488421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_34479231_34481990_34482075_34482458_34482569_34482643_34482777_34482849_34483005_34483077_34483173_34483276_34483351_34483438
ENSMUSG00000026131.21_0	chr1	+	23191	103	FSM	ENSMUSG00000026131.21	ENSMUST00000183034.5	23201	103	1	9	1	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATAGTGCAATTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	33947306	34346664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_33947534_33948079_33948115_34007783_34007985_34045271_34045480_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206022_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34335822_34335841_34338801_34338920_34340941_34341014_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ENSMUSG00000026131.21_18	chr1	+	17201	93	FSM	ENSMUSG00000026131.21	ENSMUST00000097786.10	17212	93	4	7	4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAACGTATGGAATACT	NA	NA	NA	NA	NA	NA	NA	NA	34050897	34347726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34050997_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206022_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34335822_34335841_34338801_34338920_34340941_34341014_34341910_34342114_34345608_34345733_34346410
ENSMUSG00000026131.21_26	chr1	+	23268	98	FSM	ENSMUSG00000026131.21	ENSMUST00000115104.10	23279	98	6	5	6	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAACGTATGGAATACT	NA	NA	NA	NA	NA	NA	NA	NA	34050911	34347726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34050997_34125322_34125385_34153013_34153104_34155198_34155277_34156512_34156606_34174170_34174338_34191282_34191396_34191493_34191601_34193593_34193714_34195679_34195776_34195861_34195990_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206022_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34227052_34232345_34232472_34232623_34233085_34233302_34233595_34233746_34234908_34235143_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34334746_34334765_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ENSMUSG00000026131.21_51	chr1	+	8756	24	FSM	ENSMUSG00000026131.21	ENST00000370765.11	8776	24	8	12	-6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAAAATATCGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	34199404	34222944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34199578_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206019_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34216876_34219580_34220215
ENSMUSG00000026131.21_59	chr1	+	16330	84	FSM	ENSMUSG00000026131.21	ENSMUST00000185269.7	16340	84	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTACATCGCTATGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	34199415	34347480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34199578_34199700_34199795_34200084_34200240_34202089_34202553_34202706_34202836_34202977_34203056_34203156_34203319_34203407_34203513_34204138_34204235_34205260_34205387_34206022_34206173_34206356_34206512_34206691_34206819_34206903_34207088_34208244_34208403_34208830_34209010_34209440_34209580_34210196_34210391_34211263_34211427_34212082_34212167_34213195_34213304_34213777_34213877_34223096_34223226_34225042_34225132_34225899_34226033_34236281_34236435_34237598_34237833_34238372_34238640_34239950_34240497_34241525_34241703_34247634_34247759_34250234_34250444_34251302_34251621_34251982_34252150_34253614_34253772_34254566_34254694_34256890_34256954_34257415_34257658_34258476_34258607_34262884_34263085_34264589_34265086_34266855_34268328_34281699_34281862_34283424_34283596_34286729_34286897_34288559_34288720_34288884_34289212_34289690_34289776_34290776_34291019_34291891_34292099_34295312_34295433_34295622_34295731_34296802_34297022_34299244_34299449_34301100_34301333_34302344_34302572_34303605_34303729_34303830_34303933_34305937_34306040_34307309_34307484_34307815_34307972_34309908_34310107_34310435_34310565_34313248_34313420_34314285_34314442_34314753_34314961_34317100_34317221_34321503_34321674_34323339_34323500_34326267_34326463_34326971_34327101_34328604_34328749_34329439_34329629_34330867_34330998_34332400_34332565_34333464_34333628_34334234_34334390_34334542_34334618_34335822_34335841_34338801_34338920_34341910_34342114_34342501_34342613_34345608_34345733_34346410
ENSMUSG00000026134.12_0	chr1	-	1950	14	FSM	ENSMUSG00000026134.12	ENSMUST00000027312.11	1975	14	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGACTATATCTGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	33708860	33492899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_33493386_33503133_33503203_33519538_33519622_33523762_33523890_33551096_33551283_33553225_33553299_33572376_33572445_33667475_33667614_33669418_33669515_33701326_33701448_33702857_33702938_33706125_33706230_33707938_33708102_33708704
ENSMUSG00000026135.18_0	chr1	-	6472	9	FSM	ENSMUSG00000026135.18	ENSMUST00000027315.14	6480	9	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTGTCCTATGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74627182	74605590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74606507_74607709_74607816_74608837_74611743_74612697_74612876_74614938_74615764_74617281_74617447_74618483_74619087_74624542_74624857_74626722
ENSMUSG00000026142.16_0	chr1	+	3614	7	FSM	ENSMUSG00000026142.16	ENSMUST00000027322.14	3636	7	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATAATCAGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	82294185	82423078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82294370_82318039_82318552_82320450_82320584_82346012_82346102_82348054_82348112_82355281_82355426_82420583
ENSMUSG00000026147.17_0	chr1	+	770	5	FSM	ENSMUSG00000026147.17	ENST00000370496.3	773	5	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATGGTTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24218365	24278387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_24218443_24218555_24218689_24224118_24224516_24233763_24233848_24278308
ENSMUSG00000026147.17_1	chr1	+	765	5	NNC	ENSMUSG00000026147.17	novel	773	5	NA	NA	10	-2	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATGGTTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24218374	24278387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_24218447_24218555_24218689_24224118_24224516_24233763_24233848_24278308
ENSMUSG00000026147.17_3	chr1	+	694	4	ISM	ENSMUSG00000026147.17	ENST00000370496.3	773	5	190	2	190	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAATGGTTTCCCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	24218554	24278387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_24218689_24224118_24224516_24233763_24233848_24278308
ENSMUSG00000026150.15_0	chr1	+	1879	9	FSM	ENSMUSG00000026150.15	ENSMUST00000078332.13	1894	9	8	7	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAGCAATGTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	82702618	82730104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713139_82713229_82719538_82719698_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_2	chr1	+	1692	8	FSM	ENSMUSG00000026150.15	ENSMUST00000073025.12	1706	8	10	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCAAAGCAATGTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	82702649	82730104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82702806_82704948_82705058_82706936_82707158_82708833_82709004_82713136_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026150.15_9	chr1	+	1060	8	FSM	ENSMUSG00000026150.15	ENST00000409616.5	1073	8	10	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACCTGGAAATATAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	82704957	82729468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82705058_82705787_82705960_82706936_82707158_82708833_82709004_82713139_82713229_82724803_82724864_82728240_82728326_82729305
ENSMUSG00000026153.16_0	chr1	-	4964	22	FSM	ENSMUSG00000026153.16	ENSMUST00000187369.7	4976	22	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGCTGTAATTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24139257	24050677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069022_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24137711_24137801_24139141
ENSMUSG00000026153.16_1	chr1	-	5514	21	FSM	ENSMUSG00000026153.16	ENSMUST00000027337.15	5536	21	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAACATTATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24139400	24050769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24051579_24053859_24053974_24059755_24059867_24060934_24061087_24063293_24063392_24063862_24063955_24065688_24065850_24067280_24069610_24069822_24069978_24071743_24071818_24083194_24083351_24085438_24085489_24092263_24092418_24093084_24093212_24094824_24094999_24096284_24096356_24096446_24096587_24106979_24107060_24124491_24124608_24125600_24125693_24139141
ENSMUSG00000026154.5_0	chr1	-	672	3	FSM	ENSMUSG00000026154.5	ENSMUST00000027338.4	683	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTATTATTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24044727	24035020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24035442_24042237_24042388_24044626
ENSMUSG00000026155.14_1	chr1	-	2268	10	FSM	ENSMUSG00000026155.14	ENSMUST00000027339.14	2289	10	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACACACCTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23961387	23884715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_23885645_23887344_23887653_23888383_23888550_23892503_23892632_23898103_23898195_23905297_23905379_23915454_23915531_23916789_23916876_23930940_23931075_23961118
ENSMUSG00000026156.9_0	chr1	+	2148	4	FSM	ENSMUSG00000026156.9	ENST00000615536.1	2159	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGGAGGACCCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23801726	23885668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_23802094_23854301_23854447_23883953_23884103_23884181
ENSMUSG00000026158.12_0	chr1	-	4835	7	FSM	ENSMUSG00000026158.12	ENSMUST00000027343.6	4844	7	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTACCACGCCCTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	23422253	23405510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_23409530_23414810_23414957_23415068_23415136_23415251_23415331_23417806_23417886_23418052_23418140_23421895
ENSMUSG00000026159.14_0	chr1	+	2062	14	FSM	ENSMUSG00000026159.14	ENST00000409979.6	2076	14	14	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTGTCTTGTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	82817197	82872843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82858467_82858540_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ENSMUSG00000026159.14_7	chr1	+	8038	13	FSM	ENSMUSG00000026159.14	ENSMUST00000189220.7	8044	13	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	82817209	82878903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82817611_82836076_82836171_82848405_82848522_82853008_82853172_82853891_82854046_82857728_82857849_82859948_82860159_82860901_82861083_82863831_82863909_82864095_82864189_82871144_82871304_82872202_82872289_82872719
ENSMUSG00000026162.9_0	chr1	-	1513	7	ISM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	4376	2	4376	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTGTGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75097468	75006299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219
ENSMUSG00000026162.9_1	chr1	-	1579	8	FSM	ENSMUSG00000026162.9	ENSMUST00000152855.3	1586	8	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGTGTGTGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75101839	75006299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75006928_75007327_75007435_75007953_75008072_75084467_75084527_75085659_75085799_75094701_75094915_75097219_75097475_75101779
ENSMUSG00000026167.15_0	chr1	+	2447	4	FSM	ENSMUSG00000026167.15	ENSMUST00000006718.15	2468	4	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACACAAACAAGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	74830681	74843324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74831443_74832521_74832785_74839691_74840072_74842281
ENSMUSG00000026170.7_0	chr1	+	1870	9	FSM	ENSMUSG00000026170.7	ENSMUST00000027356.7	1892	9	2	20	2	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATTTAAAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	74752734	74777031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74753051_74771077_74771269_74774435_74774636_74774712_74774911_74775022_74775196_74775839_74776007_74776175_74776258_74776337_74776551_74776701
ENSMUSG00000026171.13_0	chr1	-	1390	9	ISM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	2262	11	2242	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATCTAGCCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	74638294	74632917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224
ENSMUSG00000026171.13_1	chr1	-	1465	10	FSM	ENSMUSG00000026171.13	ENSMUST00000027357.12	1479	10	4	10	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCATCTAGCCTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	74640552	74632916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74633562_74633718_74633854_74634367_74634461_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUSG00000026171.13_5	chr1	-	1445	10	FSM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATCTAGCCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	74640536	74632917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224_74638300_74640483
ENSMUSG00000026171.13_6	chr1	-	1386	9	ISM	ENSMUSG00000026171.13	ENSMUST00000113721.8	1451	10	2243	6	2243	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCATCTAGCCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	74638293	74632917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_74633562_74633718_74633854_74634367_74634458_74634789_74634928_74635024_74635097_74637520_74637591_74637688_74637757_74637851_74637952_74638224
ENSMUSG00000026172.13_0	chr1	+	1469	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113733.10	1488	8	12	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAATCAGGCTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	74627459	74631276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74627553_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_2	chr1	+	1873	8	FSM	ENSMUSG00000026172.13	ENSMUST00000027358.11	1890	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATCTGCCTGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	74627468	74631595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74627647_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026172.13_4	chr1	+	1658	8	FSM	ENSMUSG00000026172.13	ENSMUST00000113732.2	1679	8	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCAGGTACCTACAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	74627550	74631345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74627764_74628644_74629038_74629118_74629259_74629423_74629619_74629829_74629894_74630118_74630289_74630747_74630866_74630980
ENSMUSG00000026173.16_0	chr1	+	4535	17	FSM	ENSMUSG00000026173.16	ENSMUST00000113747.8	2720	17	-6	-1809	-6	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74582055	74606945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74582188_74587071_74587128_74587263_74587423_74588333_74588563_74590178_74590309_74591146_74591379_74593648_74593851_74595101_74595247_74596878_74597032_74599448_74599653_74601213_74601383_74601872_74601990_74602609_74602783_74603535_74603672_74604190_74604341_74604418_74604527_74604905
ENSMUSG00000026174.10_0	chr1	+	3259	8	FSM	ENSMUSG00000026174.10	ENSMUST00000087215.7	3268	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTGTTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74545225	74570001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74545621_74556228_74556409_74558059_74558176_74561476_74561587_74562662_74562773_74566150_74566250_74566750_74566843_74567844
ENSMUSG00000026176.14_0	chr1	+	2847	7	FSM	ENSMUSG00000026176.14	ENSMUST00000027367.14	2876	7	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATACACAAAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	74430677	74436425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74431124_74432436_74432586_74432955_74433061_74433177_74433235_74433798_74433892_74433995_74434182_74434614
ENSMUSG00000026177.12_0	chr1	+	2282	15	FSM	ENSMUSG00000026177.12	ENSMUST00000027368.6	2315	15	5	28	5	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATAAATAAATCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	74414366	74425193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74414481_74414876_74415011_74415951_74416075_74416315_74416436_74418941_74419049_74419355_74419427_74419767_74419836_74420000_74420157_74420894_74421054_74422596_74422687_74422783_74422904_74423182_74423333_74423855_74423930_74424299_74424454_74424551
ENSMUSG00000026179.15_0	chr1	+	723	3	FSM	ENSMUSG00000026179.15	ENSMUST00000113805.8	740	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGGAAAGGAGGCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	74324096	74326604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74324297_74325000_74325170_74326250
ENSMUSG00000026179.15_1	chr1	+	2844	9	FSM	ENSMUSG00000026179.15	ENSMUST00000087225.6	2859	9	5	10	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATTTAACCAAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	74371773	74392835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74371951_74386543_74386660_74386810_74386924_74387921_74387981_74388466_74388560_74388872_74389037_74389775_74389863_74390695_74390812_74390916
ENSMUSG00000026181.14_0	chr16	+	4902	8	FSM	ENSMUSG00000026181.14	ENSMUST00000027373.12	4922	8	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTCCTGAGTGCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	16714346	16745222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16714489_16721187_16721456_16728802_16728946_16731897_16732101_16733023_16733213_16735523_16735668_16740326_16740421_16741503
ENSMUSG00000026185.9_0	chr1	-	5991	4	FSM	ENSMUSG00000026185.9	ENSMUST00000027377.9	6006	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGCTTGCATCGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72914034	72897096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_72901668_72902301_72902422_72903009_72903240_72912964
ENSMUSG00000026187.10_0	chr1	+	2534	21	FSM	ENSMUSG00000026187.10	ENSMUST00000027379.10	2549	21	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATTTCTTGTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	72346595	72434106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72346727_72349593_72349708_72351566_72351751_72353312_72353362_72354617_72354741_72358157_72358350_72364232_72364348_72365374_72365514_72369084_72369198_72373794_72373858_72378118_72378257_72379147_72379239_72382167_72382302_72385386_72385584_72393401_72393496_72395975_72396046_72420777_72420888_72422516_72422614_72422860_72422929_72433054_72433127_72433866
ENSMUSG00000026188.12_0	chr1	+	2905	3	FSM	ENSMUSG00000026188.12	ENSMUST00000027380.12	2928	3	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGATTAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	72323541	72342254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72323626_72336928_72337338_72339842
ENSMUSG00000026188.12_1	chr1	+	1835	3	FSM	ENSMUSG00000026188.12	ENST00000406027.2	1853	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATCCCAAGACCTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	72323623	72340994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72323851_72336881_72337338_72339842
ENSMUSG00000026189.14_0	chr1	-	1174	8	FSM	ENSMUSG00000026189.14	ENSMUST00000027381.13	1186	8	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCGGTTATCTTTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	72323464	72298333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_72298593_72301110_72301223_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ENSMUSG00000026189.14_4	chr1	-	910	7	FSM	ENSMUSG00000026189.14	ENSMUST00000097698.5	932	7	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAATGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72323399	72306157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_72306330_72306565_72306677_72309435_72309533_72314044_72314127_72315324_72315491_72316445_72316580_72323251
ENSMUSG00000026192.14_0	chr1	+	2837	16	FSM	ENSMUSG00000026192.14	ENSMUST00000027384.6	2845	16	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTTTCTGTGCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	71596315	71618789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_71596434_71596655_71596783_71598384_71598462_71600047_71600115_71602917_71603007_71603564_71603717_71603969_71604127_71606972_71607099_71608121_71608230_71608998_71609085_71609998_71610089_71612066_71612196_71615199_71615293_71615775_71615959_71616944_71617101_71617710
ENSMUSG00000026193.16_0	chr1	-	8031	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188894.7	8043	45	9	3	-2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTGGACGTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71692322	71624681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_19	chr1	-	7674	44	FSM	ENSMUSG00000026193.16	ENSMUST00000190780.7	7694	44	14	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692317	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_2	chr1	-	7389	44	FSM	ENSMUSG00000026193.16	ENSMUST00000189821.7	7410	44	14	7	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692317	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_20	chr1	-	8295	46	FSM	ENSMUSG00000026193.16	ENSMUST00000055226.13	8315	46	14	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692320	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71652921_71653195_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_22	chr1	-	7785	44	FSM	ENSMUSG00000026193.16	ENSMUST00000186129.7	7797	44	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692353	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636907_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_3	chr1	-	7946	45	FSM	ENSMUSG00000026193.16	ENSMUST00000187938.7	7965	45	12	7	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692319	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636832_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026193.16_7	chr1	-	7659	45	FSM	ENSMUSG00000026193.16	ENSMUST00000188674.7	7680	45	14	7	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCATGATGTGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	71692317	71624688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71625443_71625988_71626103_71629256_71629364_71629925_71630052_71632229_71632395_71634822_71634962_71636439_71636547_71637532_71637623_71638373_71638554_71638761_71638852_71639448_71639626_71640359_71640448_71641468_71641657_71642818_71643089_71644128_71644243_71645043_71645200_71645861_71646027_71647062_71647180_71648571_71648842_71650087_71650178_71651626_71651810_71654518_71654711_71657737_71657825_71658542_71658712_71659883_71659979_71663236_71663504_71665132_71665406_71666321_71666517_71667215_71667306_71667566_71667696_71668474_71668652_71668824_71669003_71671199_71671322_71676410_71676555_71677615_71677745_71679450_71679604_71680310_71680488_71681110_71681291_71682118_71682311_71684705_71684862_71687167_71687306_71688352_71688485_71689720_71689859_71690679_71690809_71691990
ENSMUSG00000026196.8_0	chr1	-	5631	11	FSM	ENSMUSG00000026196.8	ENSMUST00000027393.8	5659	11	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAAGAATGAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	71142283	71066662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_71070012_71070517_71070616_71085836_71085930_71086798_71086932_71092771_71092881_71104637_71104811_71106266_71106348_71113701_71114640_71127267_71127411_71128629_71128687_71141826
ENSMUSG00000026197.13_0	chr1	+	1199	10	FSM	ENSMUSG00000026197.13	ENSMUST00000160439.8	1206	10	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTATGAGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	75145289	75148266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75145352_75145474_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUSG00000026197.13_2	chr1	+	1135	9	FSM	ENSMUSG00000026197.13	ENSMUST00000027394.12	1316	9	175	6	175	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGATGTATGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75145473	75148263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75145551_75145828_75145924_75146143_75146276_75146408_75146561_75147010_75147104_75147182_75147244_75147329_75147398_75147619_75147693_75147879
ENSMUSG00000026198.16_0	chr1	-	2954	19	FSM	ENSMUSG00000026198.16	ENSMUST00000027396.15	2966	19	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGACGGCTGTGGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	75157028	75148364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75155574_75155713_75156213
ENSMUSG00000026198.16_1	chr1	-	2725	18	FSM	ENSMUSG00000026198.16	ENST00000295750.5	2749	18	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATAAATGGCCTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	75156957	75148384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75148633_75148757_75148827_75148909_75149005_75149198_75149312_75149434_75149610_75150188_75150294_75150505_75150564_75150782_75150869_75150969_75151034_75151121_75151199_75151345_75151472_75151616_75151683_75152151_75152262_75152733_75152856_75153946_75154131_75154308_75154411_75154565_75154747_75156213
ENSMUSG00000026199.18_1	chr1	+	2723	13	FSM	ENSMUSG00000026199.18	ENSMUST00000152233.9	2739	13	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAACTGTGTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	75168812	75176024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75169322_75170821_75170929_75171484_75171588_75171706_75171901_75172243_75172357_75172444_75172593_75172796_75173026_75173157_75173314_75174287_75174769_75174908_75175021_75175120_75175289_75175423_75175510_75175707
ENSMUSG00000026200.14_0	chr1	-	1601	13	FSM	ENSMUSG00000026200.14	ENST00000409640.5	1617	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1469	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAAGAAAGATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	75185861	75176142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75176402_75176554_75176771_75176973_75177106_75177587_75177702_75177841_75177932_75178042_75178118_75178386_75178506_75178693_75178735_75178830_75178953_75179051_75179111_75184962_75185024_75185330_75185482_75185699
ENSMUSG00000026201.13_1	chr1	+	2716	8	FSM	ENSMUSG00000026201.13	ENST00000409638.7	2724	8	1	7	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCTCCAAGTAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	75187465	75192245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75187526_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_16	chr1	+	2649	7	ISM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	409	5	11	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGCTCCAAGTAGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	75187890	75192245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_17	chr1	+	717	5	FSM	ENSMUSG00000026201.13	ENST00000409516.7	736	5	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGGCTCTCACAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	75187894	75190671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75188059_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026201.13_8	chr1	+	2857	8	FSM	ENSMUSG00000026201.13	ENSMUST00000027401.11	2876	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAACAGGCTCCAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	75187491	75192241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75187697_75187883_75188059_75188568_75188789_75189243_75189378_75189529_75189651_75189776_75189873_75190219_75190342_75190457
ENSMUSG00000026202.14_0	chr1	-	2833	4	FSM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTCTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	75195932	75190872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75193238_75193470_75193620_75193855_75194079_75195836
ENSMUSG00000026202.14_1	chr1	-	2738	3	ISM	ENSMUSG00000026202.14	ENSMUST00000186213.7	2840	4	1859	1	1859	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTCTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	75194079	75190872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_75193238_75193470_75193620_75193855
ENSMUSG00000026203.17_0	chr1	+	3051	9	FSM	ENSMUSG00000026203.17	ENSMUST00000188931.7	3066	9	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75213064	75222332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ENSMUSG00000026203.17_2	chr1	+	1183	7	ISM	ENSMUSG00000026203.17	ENSMUST00000055223.14	1199	8	5	1143	1	-1143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCGGGGGGCACAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	75213113	75220305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_75213593_75214098_75214209_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101
ENSMUSG00000026203.17_3	chr1	+	1814	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188346.7	1823	10	0	9	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAACTCGGTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75213112	75222327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75213182_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ENSMUSG00000026203.17_4	chr1	+	1849	10	FSM	ENSMUSG00000026203.17	ENSMUST00000188290.7	1855	10	4	2	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTCGGTGGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75213134	75222332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75213234_75213495_75213593_75214098_75214209_75215923_75215978_75216151_75216275_75217535_75217629_75217814_75217918_75218052_75218124_75220101_75220306_75221437
ENSMUSG00000026205.9_0	chr1	-	1541	11	FSM	ENSMUSG00000026205.9	ENST00000295738.11	1561	11	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCATCAAGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	75110559	75102377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75102663_75102985_75103082_75105116_75105285_75105547_75105654_75108304_75108351_75108791_75108886_75109242_75109425_75109594_75109672_75109838_75109937_75110044_75110203_75110328
ENSMUSG00000026207.17_1	chr1	+	10725	40	FSM	ENSMUSG00000026207.17	ENST00000312358.12	10753	40	13	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGGAAAATAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75351951	75408908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75352478_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75381530_75381792_75382949_75383109_75383222_75383413_75383519_75383744_75386597_75386718_75386932_75387038_75387200_75387408_75387722_75387847_75387929_75388106_75390959_75391073_75391643_75391813_75391963_75392061_75392185_75392387_75393686_75393745_75394306_75394385_75394470_75394650_75395596_75395768_75396872_75396916_75397934_75398004_75398203_75400173_75400459_75400592_75403407_75403525_75403687_75403856_75403957_75404081_75404254_75404423_75404535_75405116_75405703_75405944_75406040_75406265_75407082_75407159_75407440_75407591_75407902
ENSMUSG00000026207.17_10	chr1	+	10776	41	FSM	ENSMUSG00000026207.17	ENSMUST00000087122.12	10801	41	0	25	0	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAACAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75351940	75408939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75352478_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75381530_75381792_75382949_75383109_75383222_75383413_75383519_75383744_75386597_75386718_75386932_75387038_75387200_75387408_75387722_75387847_75387929_75388106_75390959_75391073_75391643_75391813_75391963_75392061_75392185_75392387_75393686_75393745_75394306_75394385_75394470_75394650_75395074_75395102_75395614_75395768_75396872_75396916_75397934_75398004_75398203_75400173_75400459_75400592_75403407_75403525_75403687_75403856_75403957_75404081_75404254_75404423_75404535_75405116_75405703_75405944_75406040_75406265_75407082_75407159_75407440_75407591_75407902
ENSMUSG00000026207.17_17	chr1	+	3386	11	FSM	ENSMUSG00000026207.17	ENSMUST00000113590.8	3393	11	3	4	3	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTAGTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75358760	75381203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75358819_75359780_75359824_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ENSMUSG00000026207.17_21	chr1	+	3327	10	ISM	ENSMUSG00000026207.17	ENSMUST00000113590.8	3393	11	1024	4	1024	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTAGTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75359781	75381203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_75359824_75361299_75361390_75361471_75361809_75364441_75365749_75367622_75367767_75368405_75368589_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ENSMUSG00000026207.17_23	chr1	+	1251	5	FSM	ENSMUSG00000026207.17	ENSMUST00000113587.8	1254	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTAGTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75377278	75381203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75377306_75377698_75377875_75378106_75378196_75378941_75379118_75380420
ENSMUSG00000026207.17_24	chr1	+	1209	4	FSM	ENSMUSG00000026207.17	ENSMUST00000122266.3	917	4	60	-352	60	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTAGTGTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75377713	75381203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75377875_75378106_75378196_75378941_75379118_75380420
ENSMUSG00000026208.10_0	chr1	+	3011	9	FSM	ENSMUSG00000026208.10	ENSMUST00000027409.10	3028	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	19565	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTATTATGAGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	75336983	75345217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75337637_75338801_75338863_75338956_75339053_75339208_75339371_75339537_75339664_75340114_75340336_75341971_75342016_75343403_75343487_75343652
ENSMUSG00000026209.16_0	chr1	-	2478	15	FSM	ENSMUSG00000026209.16	ENSMUST00000066668.14	2488	15	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCAGCTGGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75294278	75284546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293978
ENSMUSG00000026209.16_3	chr1	-	1564	15	FSM	ENSMUSG00000026209.16	ENSMUST00000113605.10	1571	15	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGCTCTCTGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75293588	75285214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353_75293448_75293534
ENSMUSG00000026209.16_4	chr1	-	1798	14	FSM	ENSMUSG00000026209.16	ENSMUST00000187836.7	1862	14	58	6	58	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCAGCTCTCTGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	75293735	75285214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75285354_75285942_75286111_75288435_75288538_75288635_75288676_75289048_75289210_75290069_75290154_75291007_75291086_75291773_75291882_75291988_75292065_75292262_75292394_75292588_75292715_75292973_75293088_75293184_75293274_75293353
ENSMUSG00000026211.19_0	chr1	-	5665	20	FSM	ENSMUSG00000026211.19	ENSMUST00000113567.10	5679	20	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCACACCTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75482998	75462475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75462604_75463283_75463554_75463866_75463972_75464272_75464435_75464549_75464707_75465232_75465346_75466126_75466394_75467439_75467713_75467831_75468102_75469149_75469438_75469513_75469790_75470428_75470702_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026211.19_11	chr1	-	3364	9	FSM	ENSMUSG00000026211.19	ENSMUST00000113565.3	3379	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGAAACCTCATGGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75482998	75472987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75473269_75473651_75473925_75474718_75474992_75476545_75476819_75478602_75478900_75479556_75479860_75480010_75480263_75480340_75480611_75481856
ENSMUSG00000026213.16_0	chr1	+	4444	25	FSM	ENSMUSG00000026213.16	ENSMUST00000027414.16	4458	25	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATTAGTCCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75498180	75513973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75498287_75498407_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ENSMUSG00000026213.16_2	chr1	+	4147	24	FSM	ENSMUSG00000026213.16	ENSMUST00000113553.2	4153	24	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATTGCTGACTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	75498199	75513574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75498494_75501326_75501533_75501731_75501807_75502062_75502159_75502495_75502604_75502730_75502803_75503701_75503829_75504006_75504111_75504219_75504316_75504445_75504488_75504612_75504763_75504952_75505038_75505554_75505906_75506054_75506261_75506577_75506695_75506816_75506995_75508946_75509160_75509270_75509375_75510203_75510302_75510396_75510576_75510815_75510898_75511047_75511119_75511821_75512070_75512729
ENSMUSG00000026219.15_113	chr1	-	1384	6	FSM	ENSMUSG00000026219.15	ENST00000409677.5	1392	6	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTATACTGACTGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84817018	84760551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ENSMUSG00000026219.15_114	chr1	-	1314	5	ISM	ENSMUSG00000026219.15	ENST00000409677.5	1392	6	24335	2	23743	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATACTGACTGGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	84792687	84760549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543
ENSMUSG00000026219.15_24	chr1	-	6577	43	FSM	ENSMUSG00000026219.15	ENST00000675423.1	6590	43	4	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTATAATTCGTAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	84816426	84702219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736849_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84812216_84812327_84816331
ENSMUSG00000026219.15_52	chr1	-	6389	42	FSM	ENSMUSG00000026219.15	ENST00000389044.8	6401	42	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAACGGCTTGCAGATT	NA	NA	NA	NA	NA	NA	NA	NA	84817062	84702234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_84702536_84703116_84703221_84703456_84703552_84703923_84704038_84705845_84706011_84708252_84708418_84709343_84709499_84709733_84709849_84714702_84714802_84716398_84716556_84717234_84717378_84719907_84720060_84720814_84720943_84721540_84721741_84722398_84722473_84722733_84722907_84724898_84725051_84726878_84727071_84728078_84728221_84729259_84729435_84729600_84729702_84731991_84732200_84735137_84735257_84735442_84735672_84736694_84736768_84738483_84738641_84738731_84738850_84739584_84739751_84739839_84739909_84741048_84741211_84741559_84741653_84743700_84743797_84743879_84743916_84746303_84746453_84754037_84754134_84755144_84755229_84760547_84760685_84763811_84763918_84771245_84772049_84773410_84773537_84792543_84792691_84816949
ENSMUSG00000026222.17_0	chr1	+	1968	12	FSM	ENSMUSG00000026222.17	ENSMUST00000054279.15	1978	12	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAAGGTTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85577739	85610834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85577849_85587423_85587584_85590193_85590363_85591246_85591319_85592999_85593066_85594634_85594725_85597722_85597804_85601345_85601493_85602915_85602988_85606779_85606831_85608806_85608861_85609937
ENSMUSG00000026223.16_0	chr1	+	2202	6	FSM	ENSMUSG00000026223.16	ENSMUST00000027425.16	2230	6	9	19	9	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	2592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAATTAAAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	85822010	85836377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85822511_85830730_85830872_85832934_85833124_85834142_85834254_85834728_85834880_85835267
ENSMUSG00000026228.7_0	chr1	-	2051	4	FSM	ENSMUSG00000026228.7	ENSMUST00000027431.7	2083	4	4	28	4	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAATAAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86039688	86026775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86027955_86030143_86030345_86038255_86038839_86039600
ENSMUSG00000026229.18_0	chr1	+	3071	24	FSM	ENSMUSG00000026229.18	ENST00000677180.1	3092	24	10	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATATATTAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	85992340	86066986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86066801
ENSMUSG00000026229.18_11	chr1	+	3039	23	FSM	ENSMUSG00000026229.18	ENST00000409643.6	3060	23	10	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATATATTAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	85992346	86066986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026229.18_15	chr1	+	3077	23	FSM	ENSMUSG00000026229.18	ENST00000678679.1	3091	23	10	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTTGTTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85992346	86067024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026229.18_17	chr1	+	3099	25	FSM	ENSMUSG00000026229.18	ENSMUST00000027432.9	3112	25	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCTGCTCAATCCACACA	NA	NA	NA	NA	NA	NA	NA	NA	85992350	86066870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026229.18_3	chr1	+	3137	24	FSM	ENSMUSG00000026229.18	ENST00000677259.1	3159	24	11	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATATATTAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	85992341	86066986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86058358_86058452_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026229.18_36	chr1	+	3114	24	FSM	ENSMUSG00000026229.18	ENST00000373635.9	3131	24	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGATTTGTTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85992396	86067024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85992528_85998304_85998349_85999335_85999410_85999548_85999719_86003520_86003727_86005077_86005222_86006289_86006517_86009758_86009820_86010868_86010998_86012903_86012993_86013751_86013831_86014296_86014471_86016530_86016643_86017715_86017913_86019724_86019821_86021997_86022063_86044296_86044412_86046231_86046349_86054177_86054281_86055857_86056028_86060435_86060523_86061359_86061507_86064684_86064839_86066801
ENSMUSG00000026234.13_0	chr1	-	8183	14	FSM	ENSMUSG00000026234.13	ENSMUST00000027438.8	8202	14	10	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGTCTAGATCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	86287112	86272449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026234.13_16	chr1	-	2141	12	FSM	ENSMUSG00000026234.13	ENST00000678364.1	2160	12	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGTAAAGATCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86287142	86278242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86278419_86278533_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026234.13_17	chr1	-	2325	14	FSM	ENSMUSG00000026234.13	ENST00000678246.1	2344	14	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGTAAAGATCCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86287110	86278242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86278413_86278590_86278758_86279088_86279216_86279919_86280042_86280231_86280356_86280847_86281003_86281453_86281578_86282741_86282867_86283773_86283916_86284092_86284180_86284277_86284464_86284678_86285175_86285828_86285946_86286927
ENSMUSG00000026235.15_0	chr1	-	6313	18	FSM	ENSMUSG00000026235.15	ENSMUST00000027451.13	6328	18	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACCTGAAATCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	77491719	77343830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_77346309_77349546_77350485_77351407_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUSG00000026235.15_1	chr1	-	3418	17	FSM	ENSMUSG00000026235.15	ENST00000409854.5	3436	17	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCATCACTCCTTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	77491693	77349966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_77350485_77351378_77351564_77354050_77354245_77357500_77357651_77359505_77359716_77360159_77360222_77364433_77364620_77365109_77365224_77366669_77366729_77375130_77375243_77376274_77376435_77377836_77377962_77403187_77403527_77421501_77421658_77483184_77483849_77488319_77488388_77491577
ENSMUSG00000026238.15_0	chr1	+	1203	5	FSM	ENSMUSG00000026238.15	ENSMUST00000045897.15	1216	5	10	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	22288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCCTGGTTTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86454457	86458431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86454673_86456894_86456967_86457177_86457275_86457452_86457527_86457686
ENSMUSG00000026239.15_0	chr1	-	1147	5	FSM	ENSMUSG00000026239.15	ENSMUST00000027444.15	1159	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGACTGTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	86510257	86470715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86471306_86473423_86473530_86474378_86474505_86475250_86475340_86510021
ENSMUSG00000026240.13_0	chr1	+	5360	8	FSM	ENSMUSG00000026240.13	ENSMUST00000121534.8	5383	8	16	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTGTACATTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86510641	86537090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86510819_86514737_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_1	chr1	+	772	5	FSM	ENSMUSG00000026240.13	ENST00000409091.5	784	5	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGACACCCAGGGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	86510649	86532984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86510819_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_10	chr1	+	2443	6	FSM	ENSMUSG00000026240.13	ENST00000373608.7	2455	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCATTCCATATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86516890	86534539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528947_86532779
ENSMUSG00000026240.13_2	chr1	+	1054	7	FSM	ENSMUSG00000026240.13	ENST00000410024.5	1067	7	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGCAGTGAGTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	86510654	86533017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86510819_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_6	chr1	+	2483	6	FSM	ENSMUSG00000026240.13	ENST00000620578.4	2492	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCATTCCATATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86514810	86534539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86514958_86516885_86517064_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026240.13_8	chr1	+	2219	7	FSM	ENSMUSG00000026240.13	ENSMUST00000027446.11	2231	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	86514830	86534219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86514958_86516885_86517064_86520012_86520089_86524472_86524562_86526724_86526928_86528804_86528911_86532779
ENSMUSG00000026245.17_0	chr1	-	2031	18	FSM	ENSMUSG00000026245.17	ENSMUST00000170217.8	2036	18	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGGCTCTGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	78465491	78394611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_78394860_78401829_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUSG00000026245.17_4	chr1	-	1933	17	FSM	ENSMUSG00000026245.17	ENSMUST00000068333.14	1951	17	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCATTAGGCCAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	78465523	78401711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_78401983_78420271_78420428_78431390_78431509_78435201_78435295_78438942_78439024_78439471_78439680_78439908_78439971_78443603_78443656_78444607_78444670_78445888_78445960_78447719_78447829_78449120_78449272_78452826_78452943_78454829_78454900_78456593_78456749_78458944_78459001_78465421
ENSMUSG00000026247.14_0	chr1	-	3003	18	FSM	ENSMUSG00000026247.14	ENSMUST00000161002.8	3033	18	20	10	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATATATAGCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87084223	87075386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87075809_87075947_87076025_87076346_87076443_87076855_87076922_87077217_87077343_87077505_87077574_87078198_87078251_87078327_87078387_87078621_87078726_87078856_87078932_87079170_87079270_87079704_87079928_87080540_87080666_87080841_87080935_87081022_87081134_87081239_87081309_87081925_87082811_87083969
ENSMUSG00000026248.10_0	chr1	+	1413	4	FSM	ENSMUSG00000026248.10	ENSMUST00000027464.9	1424	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTTTCCTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	79753744	79759161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_79754029_79755574_79756044_79757204_79757384_79758680
ENSMUSG00000026249.11_0	chr1	-	2184	9	FSM	ENSMUSG00000026249.11	ENSMUST00000027467.11	2210	9	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACCATGAGCCGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	79836398	79771924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_79772760_79774542_79774627_79777184_79777272_79779172_79779274_79780563_79780763_79788270_79788469_79794444_79794673_79798993_79799275_79836227
ENSMUSG00000026251.14_0	chr1	+	2912	12	FSM	ENSMUSG00000026251.14	ENSMUST00000073252.9	2925	12	9	4	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGAGCTTGTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	87118367	87127788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87118465_87118696_87118852_87119241_87119287_87119935_87120046_87120207_87120364_87120567_87120678_87122521_87122723_87123206_87123319_87123404_87123520_87125004_87125210_87125296_87125416_87126301
ENSMUSG00000026251.14_9	chr1	+	2872	11	FSM	ENSMUSG00000026251.14	ENSMUST00000186373.2	2949	11	74	3	74	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGAGCTTGTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	87118639	87127788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87118852_87119241_87119287_87119935_87120046_87120207_87120364_87120567_87120678_87122521_87122723_87123206_87123319_87123404_87123520_87125004_87125210_87125296_87125416_87126301
ENSMUSG00000026253.15_0	chr1	+	2768	12	FSM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87133534	87140406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87133602_87133796_87133937_87134189_87134235_87134371_87134482_87135108_87135265_87135929_87136028_87136736_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026253.15_4	chr1	+	2697	11	ISM	ENSMUSG00000026253.15	ENSMUST00000027470.14	2780	12	268	10	268	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87133800	87140406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87133937_87134189_87134235_87134371_87134482_87135108_87135265_87135929_87136028_87136736_87136938_87137148_87137264_87137485_87137601_87138245_87138463_87138624_87138759_87139036
ENSMUSG00000026254.18_1	chr1	+	1796	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113233.8	1807	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGGGTTGTCTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	87141646	87156578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_10	chr1	+	783	6	FSM	ENSMUSG00000026254.18	ENST00000409322.5	792	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAACAGCTGAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	87141691	87155745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87141742_87147302_87147418_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_11	chr1	+	1104	7	FSM	ENSMUSG00000026254.18	ENSMUST00000113231.4	1119	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGCTTGTCTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	87142015	87155779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87142218_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_14	chr1	+	1282	4	ISM	ENSMUSG00000026254.18	ENST00000409167.7	1345	5	5621	3	5299	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAACTCTGCCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	87147306	87154731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87147418_87152074_87152180_87153571_87153725_87153818
ENSMUSG00000026254.18_16	chr1	+	726	5	ISM	ENSMUSG00000026254.18	ENST00000409322.5	792	6	5618	9	5302	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACAACAGCTGAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	87147309	87155745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87147418_87152074_87152180_87153571_87153725_87153818_87153956_87155522
ENSMUSG00000026254.18_2	chr1	+	3376	7	FSM	ENSMUSG00000026254.18	ENSMUST00000076362.12	3394	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAACTTCTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87141645	87168202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87165567
ENSMUSG00000026254.18_3	chr1	+	3455	8	FSM	ENSMUSG00000026254.18	ENSMUST00000113235.8	3473	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAACTTCTGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	87141645	87168202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87141742_87147302_87147418_87148641_87148777_87152074_87152180_87153571_87153725_87153818_87153956_87160124_87160204_87165567
ENSMUSG00000026254.18_8	chr1	+	1345	5	FSM	ENSMUSG00000026254.18	ENST00000409167.7	1345	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCTGCCTCAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87141685	87154734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87141742_87147302_87147418_87152074_87152180_87153571_87153725_87153818
ENSMUSG00000026255.16_0	chr1	+	1842	4	FSM	ENSMUSG00000026255.16	ENSMUST00000027472.7	1854	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCAGTGTGCCTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87192095	87238560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87192477_87217189_87217338_87225350_87225486_87237382
ENSMUSG00000026259.15_0	chr1	-	2726	13	FSM	ENSMUSG00000026259.15	ENSMUST00000027477.15	2746	13	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATATAAAACAAGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	87438074	87404565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87405467_87406824_87406930_87407558_87407639_87408308_87408465_87408837_87409002_87410344_87410435_87412320_87412396_87413877_87414008_87415520_87415674_87417305_87417467_87430987_87431296_87436966_87437110_87437814
ENSMUSG00000026260.13_0	chr1	-	2001	10	FSM	ENSMUSG00000026260.13	ENSMUST00000027478.7	2020	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTCAGTTCCCTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	92401571	92366739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92392082_92392205_92395102_92395190_92397584_92397801_92398538_92398708_92401384
ENSMUSG00000026260.13_5	chr1	-	713	7	FSM	ENSMUSG00000026260.13	ENST00000678914.1	729	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAAGGGTCCCCTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	92397794	92367566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92367630_92379732_92379842_92388101_92388188_92390012_92390068_92390799_92390880_92395079_92395190_92397584
ENSMUSG00000026269.15_0	chr1	+	3322	11	FSM	ENSMUSG00000026269.15	ENSMUST00000027487.15	3337	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCACCTGGACTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	92838512	92848556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92839206_92842780_92842922_92843535_92843688_92844076_92844194_92844432_92844669_92844868_92844983_92845355_92845469_92845739_92845849_92846594_92846826_92846905_92847049_92847283
ENSMUSG00000026270.12_0	chr1	+	2882	12	FSM	ENSMUSG00000026270.12	ENSMUST00000027488.11	2902	12	11	9	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTTATGGATTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	92862108	92875654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92874936_92874983_92875230
ENSMUSG00000026270.12_5	chr1	+	1254	4	FSM	ENSMUSG00000026270.12	ENSMUST00000117814.8	1268	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCGGACCTGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92862501	92868694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92862737_92865666_92865799_92867044_92867242_92868004
ENSMUSG00000026270.12_6	chr1	+	2189	10	FSM	ENSMUSG00000026270.12	ENST00000404753.7	2212	10	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATAAACATGAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	92865672	92875641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92865799_92867044_92867242_92868004_92868223_92870203_92870346_92871021_92871189_92871400_92871664_92872416_92872620_92872738_92873001_92874495_92874696_92875230
ENSMUSG00000026272.7_0	chr1	+	1537	11	FSM	ENSMUSG00000026272.7	ENSMUST00000027491.7	1553	11	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGACCATGTGGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	93062973	93073139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93063247_93063330_93063524_93065016_93065082_93065621_93065723_93067002_93067074_93068043_93068129_93069035_93069132_93069789_93069860_93071776_93071873_93072232_93072362_93072781
ENSMUSG00000026273.14_0	chr1	-	3083	4	FSM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAGAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93233571	93226932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93229307_93230439_93230625_93232329_93232829_93233546
ENSMUSG00000026273.14_1	chr1	-	3047	3	ISM	ENSMUSG00000026273.14	ENSMUST00000112944.8	3097	4	768	0	768	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGAAAAAGAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	93232817	93226932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_93229307_93230439_93230625_93232329
ENSMUSG00000026273.14_2	chr1	-	1275	3	ISM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	809	0	757	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	93232828	93228926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_93229518_93230439_93230625_93232329
ENSMUSG00000026273.14_3	chr1	-	1358	4	FSM	ENSMUSG00000026273.14	ENSMUST00000027492.14	1366	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGAGTCTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	93233629	93228926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93229518_93230439_93230625_93232329_93232829_93233546
ENSMUSG00000026274.12_20	chr1	-	3105	12	FSM	ENSMUSG00000026274.12	ENST00000403638.7	3123	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGAGTGGGCCGGCGC	NA	NA	NA	NA	NA	NA	NA	NA	93263556	93244508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331
ENSMUSG00000026274.12_3	chr1	-	3457	14	FSM	ENSMUSG00000026274.12	ENST00000358649.8	3471	14	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTGAGCATGAGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	93263554	93240520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93240652_93242002_93242203_93244485_93244642_93244742_93244869_93247681_93247850_93248215_93248398_93248496_93249737_93251923_93252078_93253085_93253255_93254937_93255199_93258476_93258612_93259280_93259422_93262264_93262436_93263331
ENSMUSG00000026275.14_0	chr1	+	10298	10	FSM	ENSMUSG00000026275.14	ENSMUST00000027494.11	10315	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACACAACTGTTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	93270584	93301203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93271434_93273877_93274010_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478_93285584_93288447_93288535_93292611
ENSMUSG00000026275.14_4	chr1	+	725	7	FSM	ENSMUSG00000026275.14	ENST00000402734.5	735	7	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAACGTAAGAGCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	93270628	93285575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93270724_93278046_93278103_93278670_93278737_93279227_93279359_93280238_93280402_93282050_93282168_93285478
ENSMUSG00000026277.15_0	chr1	-	4240	12	FSM	ENSMUSG00000026277.15	ENSMUST00000027498.14	4249	12	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAGACAGCACTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	93563435	93547472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93550249_93551117_93551255_93552274_93552347_93552755_93552871_93553182_93553329_93553502_93553689_93553772_93553931_93554746_93554856_93555375_93555433_93556755_93556987_93563019_93563106_93563268
ENSMUSG00000026278.15_0	chr1	+	1453	5	FSM	ENSMUSG00000026278.15	ENSMUST00000027499.13	1468	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGTGTGAGACTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	93613390	93623480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93613577_93614139_93614392_93616878_93617008_93621781_93621946_93622758
ENSMUSG00000026279.15_0	chr1	-	5546	6	FSM	ENSMUSG00000026279.15	ENSMUST00000190116.7	5558	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTCCAAAAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	93682495	93629661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93677568_93678708_93682178
ENSMUSG00000026279.15_5	chr1	-	697	5	FSM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATCACTGTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	93659642	93633118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878_93653039_93659578
ENSMUSG00000026279.15_6	chr1	-	621	4	ISM	ENSMUSG00000026279.15	ENSMUST00000189728.7	713	5	6622	10	6622	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTATCACTGTGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	93653026	93633118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_93633378_93642619_93642724_93644353_93644464_93652878
ENSMUSG00000026280.18_0	chr1	+	4156	13	FSM	ENSMUSG00000026280.18	ENSMUST00000027502.16	4173	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGTAGCCCTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	93682635	93718324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93682777_93695774_93695877_93695974_93696047_93701491_93701591_93702854_93702957_93703349_93703423_93706006_93706087_93708439_93708634_93712133_93712213_93712474_93712621_93713631_93713689_93714232_93714327_93715407
ENSMUSG00000026281.16_0	chr1	-	985	5	FSM	ENSMUSG00000026281.16	ENSMUST00000027503.14	1003	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCTCACGAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	93729649	93720308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93720666_93722447_93722646_93726101_93726193_93728523_93728633_93729419
ENSMUSG00000026281.16_1	chr1	-	1015	3	FSM	ENSMUSG00000026281.16	ENSMUST00000112893.2	1040	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATCTACAAGACCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	93726710	93720457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93720666_93722447_93722646_93726101
ENSMUSG00000026281.16_2	chr1	-	1041	2	FSM	ENSMUSG00000026281.16	ENSMUST00000112890.3	1055	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCACACCCGGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	93729620	93727792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93728633_93729419
ENSMUSG00000026283.14_0	chr1	+	4528	8	FSM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATTTGAAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	93731691	93749817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93731762_93733769_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ENSMUSG00000026283.14_10	chr1	+	4458	7	ISM	ENSMUSG00000026283.14	ENSMUST00000027505.13	4533	8	2083	0	1703	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATTTGAAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	93733769	93749817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_93733842_93739503_93739671_93740128_93740241_93740387_93740482_93744096_93744233_93744359_93744422_93746002
ENSMUSG00000026289.16_0	chr1	+	2632	14	FSM	ENSMUSG00000026289.16	ENST00000347464.9	2656	14	17	7	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	87683737	87720144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87684037_87687772_87687867_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_2	chr1	+	3117	18	FSM	ENSMUSG00000026289.16	ENSMUST00000027512.13	3130	18	7	6	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTTGCGTCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	87683741	87720144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_5	chr1	+	2995	17	FSM	ENSMUSG00000026289.16	ENSMUST00000113186.8	3004	17	8	1	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTCCTTGCGTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	87683805	87720143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026289.16_7	chr1	+	3088	19	FSM	ENSMUSG00000026289.16	ENSMUST00000113190.3	3102	19	4	10	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCAAACTCCTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	87683811	87720137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87684037_87687772_87687867_87693059_87693166_87693830_87693905_87694527_87694780_87699113_87699180_87701866_87701954_87702534_87702592_87702802_87702851_87703478_87703582_87706643_87706750_87707846_87707918_87709392_87709465_87713597_87713719_87713962_87714069_87717052_87717203_87717293_87717342_87718307_87718410_87718937
ENSMUSG00000026305.16_0	chr1	+	2029	13	FSM	ENSMUSG00000026305.16	ENSMUST00000068116.13	2050	13	8	13	8	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACGTTAAAGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90926508	91056649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_90926616_90996284_90996372_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026305.16_3	chr1	+	2827	22	NIC	ENSMUSG00000026305.16	novel	2849	23	NA	NA	1	-3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCTGTGTGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	90981176	91056659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_90981446_90996284_90996386_91004665_91004714_91006112_91006158_91006752_91006804_91012667_91012728_91016355_91016434_91019323_91019390_91021281_91021360_91028298_91028335_91028906_91029033_91030968_91031041_91032848_91033020_91035019_91035113_91036301_91036395_91038076_91038170_91039877_91040020_91047862_91047913_91050143_91050262_91050799_91050880_91053362_91053468_91055807
ENSMUSG00000026305.16_6	chr1	+	3626	8	FSM	ENSMUSG00000026305.16	ENSMUST00000097649.10	3645	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTACAAGCCTACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90981187	91045030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_90981446_90996284_90996372_91028298_91028335_91028906_91029033_91032848_91033020_91035019_91035113_91039877_91040020_91042317
ENSMUSG00000026307.13_0	chr1	+	2185	12	FSM	ENSMUSG00000026307.13	ENSMUST00000027532.13	2202	12	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTGAAGTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	91226075	91248796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91226171_91228249_91228363_91230490_91230592_91232995_91233177_91236035_91236164_91236372_91236538_91237518_91237626_91243210_91243248_91244785_91244870_91245313_91245414_91246759_91246836_91247798
ENSMUSG00000026308.9_0	chr1	+	3072	8	FSM	ENSMUSG00000026308.9	ENSMUST00000027533.9	3089	8	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCATGCTCTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	91278748	91290132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91278858_91281327_91282175_91283173_91283310_91285055_91285143_91285476_91285633_91286509_91286699_91287057_91287204_91288730
ENSMUSG00000026309.15_0	chr1	-	1359	12	FSM	ENSMUSG00000026309.15	ENSMUST00000027534.13	1368	12	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTTGAGTGACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	91326497	91303553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91312961_91313069_91314936_91315064_91316066_91316187_91318328_91318386_91318853_91318920_91326372
ENSMUSG00000026309.15_5	chr1	-	873	8	ISM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	7517	0	7517	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTTATTTGAGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	91318915	91303556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328_91318386_91318853
ENSMUSG00000026309.15_6	chr1	-	937	9	FSM	ENSMUSG00000026309.15	ENST00000622223.4	937	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTTATTTGAGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	91326432	91303556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91303805_91304039_91304122_91306187_91306308_91309572_91309695_91311025_91311114_91312286_91312381_91318328_91318386_91318853_91318920_91326372
ENSMUSG00000026311.17_0	chr1	+	5806	5	FSM	ENSMUSG00000026311.17	ENSMUST00000027538.9	5826	5	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGTGTCTGGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91468449	91487305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91468587_91471872_91472020_91474649_91474953_91479775_91480162_91482472
ENSMUSG00000026313.17_0	chr1	-	8093	27	FSM	ENSMUSG00000026313.17	ENSMUST00000097644.9	8100	27	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTACCTCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	92108057	91856501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977_92076217_92107979
ENSMUSG00000026313.17_1	chr1	-	3937	26	FSM	ENSMUSG00000026313.17	ENSMUST00000008995.15	3937	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92076115	91860478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91861109_91861377_91861520_91862323_91862409_91873621_91873756_91875139_91875259_91883011_91883110_91883763_91883884_91886076_91886165_91887132_91887189_91889174_91889283_91892501_91892549_91896074_91896181_91898664_91898799_91900421_91900609_91903160_91903416_91909750_91909975_91912099_91912296_91912382_91912500_91915266_91915380_91919204_91919337_91923778_91923901_91929876_91929998_91940390_91940542_91957676_91957919_91982622_91982695_92075977
ENSMUSG00000026315.14_0	chr1	+	4565	7	FSM	ENSMUSG00000026315.14	ENSMUST00000112706.4	4581	7	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATATTCACTTATTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	107517748	107538211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_107518018_107525184_107525368_107526629_107526768_107530529_107530648_107532333_107532477_107533513_107533667_107534650
ENSMUSG00000026317.8_0	chr8	+	6835	3	FSM	ENSMUSG00000026317.8	ENSMUST00000027554.8	6857	3	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCCCAAATTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	14938120	14951708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_14939119_14944571_14945231_14946530
ENSMUSG00000026319.14_0	chr1	+	5440	29	FSM	ENSMUSG00000026319.14	ENST00000256858.10	5451	29	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTGTTTTTGCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	105591597	105682837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662177_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ENSMUSG00000026319.14_10	chr1	+	4314	29	FSM	ENSMUSG00000026319.14	ENSMUST00000039173.13	4328	29	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTATGAAAGAATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	105591613	105681792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_105592359_105605887_105605978_105614673_105614746_105614854_105614911_105615006_105615121_105619630_105619835_105619936_105620029_105620608_105620903_105623152_105623229_105624225_105624322_105631655_105631769_105641573_105641665_105644502_105644575_105646499_105646641_105647176_105647342_105648992_105649141_105653373_105653531_105654067_105654192_105655664_105655714_105658925_105659006_105662242_105662350_105663647_105663748_105668159_105668243_105669021_105669086_105670935_105671075_105673793_105673911_105678046_105678136_105678697_105678769_105681227
ENSMUSG00000026322.10_0	chr18	+	2867	7	FSM	ENSMUSG00000026322.10	ENST00000377888.8	2879	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGATCATCTGTGCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	62456975	62598837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_62457387_62474075_62474149_62545242_62545369_62546600_62546802_62561093_62561248_62570453_62571023_62597504
ENSMUSG00000026331.14_2	chr1	-	321	3	FSM	ENSMUSG00000026331.14	ENST00000389019.7	322	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGCTACTGTTTTTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	97009075	97000574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97000708_97003553_97003708_97009041
ENSMUSG00000026331.14_3	chr1	-	279	2	ISM	ENSMUSG00000026331.14	ENST00000389019.7	322	3	5377	0	5377	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTACTGTTTTTTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	97003698	97000573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_97000708_97003553
ENSMUSG00000026333.15_0	chr1	+	2029	8	FSM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	1	16	1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATAACATAAATGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	97697897	97720678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_97697981_97703171_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUSG00000026333.15_1	chr1	+	1010	3	FSM	ENSMUSG00000026333.15	ENSMUST00000112842.8	1037	3	19	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	97697922	97705856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_97697981_97703171_97703318_97705050
ENSMUSG00000026333.15_2	chr1	+	1950	7	ISM	ENSMUSG00000026333.15	ENSMUST00000112844.10	2046	8	5274	13	5249	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAACATAAATGAAACGAA	NA	NA	NA	NA	NA	NA	NA	NA	97703170	97720681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_97703318_97705050_97705245_97710651_97710958_97712477_97712670_97712779_97712948_97713700_97713984_97720021
ENSMUSG00000026335.17_0	chr1	-	4086	26	FSM	ENSMUSG00000026335.17	ENSMUST00000097625.10	4102	26	8	8	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCATTAGCAGTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98023349	97748827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97749714_97750660_97750715_97753561_97753763_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ENSMUSG00000026335.17_1	chr1	-	4078	26	FSM	ENSMUSG00000026335.17	ENSMUST00000058762.15	4095	26	8	9	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCATTAGCAGTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	98023338	97748827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97791927_97792246_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581_97904985_98023209
ENSMUSG00000026335.17_42	chr1	-	3617	24	FSM	ENSMUSG00000026335.17	ENSMUST00000161567.8	3630	24	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCATTAGCAGTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97904970	97748827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97749714_97750660_97750715_97753561_97753766_97759179_97759234_97762132_97762242_97765687_97765804_97768004_97768206_97768423_97768635_97769956_97770030_97772320_97772438_97780827_97780958_97811850_97811923_97813326_97813512_97822085_97822190_97823356_97823434_97823693_97823775_97824932_97825001_97826065_97826115_97850818_97850903_97852155_97852242_97862375_97862464_97872344_97872403_97903509_97903631_97904581
ENSMUSG00000026339.19_0	chr1	+	7255	24	FSM	ENSMUSG00000026339.19	ENSMUST00000036025.16	7274	24	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTAATTTGGTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	121358788	121434181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389961_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUSG00000026339.19_7	chr1	+	2313	24	FSM	ENSMUSG00000026339.19	ENSMUST00000112621.2	2338	24	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTTCAGCAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	121358854	121429308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_121358987_121362261_121362376_121365524_121365620_121369510_121369623_121373368_121373468_121375952_121376010_121383799_121383901_121389192_121389230_121389615_121389709_121389964_121390013_121390827_121390915_121403760_121403878_121405563_121405627_121408543_121408618_121409724_121409807_121410329_121410396_121411015_121411070_121414331_121414395_121418850_121418960_121420633_121420717_121422124_121422163_121424712_121424798_121426936_121427051_121428918
ENSMUSG00000026341.17_0	chr1	-	2552	13	FSM	ENSMUSG00000026341.17	ENSMUST00000027579.17	2554	13	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTTTTCTTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	125363462	125320641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021_125363195_125363386
ENSMUSG00000026341.17_1	chr1	-	2545	12	FSM	ENSMUSG00000026341.17	ENSMUST00000178474.8	2565	12	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTCCTGATGGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	125363270	125320648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_125321828_125322804_125322889_125324843_125324970_125325188_125325282_125331129_125331304_125333581_125333726_125335028_125335137_125336256_125336353_125339000_125339112_125343992_125344118_125345985_125346042_125363021
ENSMUSG00000026341.17_40	chr1	-	487	5	FSM	ENSMUSG00000026341.17	ENST00000415792.5	500	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAGCTACACACACTG	NA	NA	NA	NA	NA	NA	NA	NA	125363107	125333584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_125333726_125335028_125335137_125336256_125336353_125345985_125346042_125363021
ENSMUSG00000026342.11_0	chr1	+	2695	16	FSM	ENSMUSG00000026342.11	ENSMUST00000027580.11	2733	16	8	30	8	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	125488760	125523527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_125489022_125490011_125490103_125490236_125490379_125494204_125494349_125496283_125496347_125498283_125498366_125500049_125500241_125502402_125502485_125503908_125503997_125506999_125507065_125512189_125512295_125512810_125512971_125515101_125515193_125517547_125517703_125518769_125518867_125522649
ENSMUSG00000026343.7_0	chr1	+	2669	2	FSM	ENSMUSG00000026343.7	ENSMUST00000027581.7	2691	2	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCAAAGTCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	125604741	125801587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_125605930_125800106
ENSMUSG00000026349.15_0	chr1	+	4510	10	FSM	ENSMUSG00000026349.15	ENSMUST00000112570.2	4511	10	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTGTGTGAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	127701901	127733669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128
ENSMUSG00000026349.15_5	chr1	+	4407	11	FSM	ENSMUSG00000026349.15	ENST00000295238.10	4424	11	10	7	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTACAGGATTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	127701953	127733663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_127702123_127702837_127702920_127719341_127719471_127721094_127721156_127722991_127723055_127725577_127725624_127727126_127727291_127729342_127729414_127729898_127731031_127731128_127732316_127732360
ENSMUSG00000026353.10_0	chr1	+	4096	13	FSM	ENSMUSG00000026353.10	ENSMUST00000027592.6	4113	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACTACCCTGCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128171907	128207107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_128172290_128179939_128180043_128183169_128183199_128183855_128183975_128186568_128186741_128187180_128187275_128188570_128188626_128190529_128190695_128194026_128194152_128197605_128197709_128200557_128200690_128202538_128202742_128204693
ENSMUSG00000026355.12_0	chr1	-	2897	17	FSM	ENSMUSG00000026355.12	ENSMUST00000027601.11	2910	17	12	1	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2847	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTGTTGGATTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	128287389	128259327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_128259789_128261253_128261394_128262499_128262656_128263466_128263603_128265852_128266015_128267086_128267216_128269021_128269178_128271147_128271256_128272033_128272176_128273608_128273751_128276105_128276257_128276661_128276808_128277040_128277207_128279169_128279420_128281196_128281308_128283249_128283397_128287195
ENSMUSG00000026356.16_0	chr1	-	2157	16	FSM	ENSMUSG00000026356.16	ENSMUST00000027602.15	2175	16	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTGATGATAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	128345086	128291451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_128292063_128294434_128294507_128294657_128294770_128296101_128296183_128297229_128297273_128299876_128300024_128301673_128301822_128303914_128304050_128306502_128306615_128314853_128314914_128316855_128316937_128319007_128319111_128333102_128333206_128341396_128341490_128343090_128343149_128344888
ENSMUSG00000026360.10_0	chr1	-	2997	5	FSM	ENSMUSG00000026360.10	ENSMUST00000127206.8	3021	5	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATAATTGTTTGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	143879879	143875079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_143877613_143877853_143878021_143878517_143878580_143878689_143878792_143879746
ENSMUSG00000026361.10_0	chr1	-	11560	17	FSM	ENSMUSG00000026361.10	ENSMUST00000018337.9	11586	17	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGTTCACTGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	143578612	143474544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143543362_143543428_143545727_143545807_143547067_143547167_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ENSMUSG00000026361.10_2	chr1	-	2501	14	FSM	ENSMUSG00000026361.10	ENST00000635846.1	2513	14	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGGTTTTGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	143578366	143483114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_143484296_143485107_143485250_143491040_143491142_143493016_143493179_143503239_143503328_143503583_143503620_143510769_143510828_143553376_143553594_143561660_143561750_143567012_143567066_143567151_143567215_143571130_143571201_143574954_143575061_143578231
ENSMUSG00000026365.16_0	chr1	-	4334	22	FSM	ENSMUSG00000026365.16	ENSMUST00000066859.13	4361	22	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACTTCTTGCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	140111128	140013602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_140014261_140016395_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040170_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688_140090875_140110902
ENSMUSG00000026365.16_6	chr1	-	3425	20	FSM	ENSMUSG00000026365.16	ENST00000367429.9	3441	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTACGTAAGTACCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	140090851	140016401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_140016579_140026607_140026785_140028545_140028723_140029322_140029497_140030074_140030285_140030445_140030623_140033132_140033310_140036229_140036410_140036495_140036679_140040166_140040345_140046324_140046502_140047608_140047792_140063884_140064062_140064433_140064629_140071668_140071843_140075392_140075564_140082206_140082399_140084997_140085075_140090283_140090390_140090688
ENSMUSG00000026374.15_1	chr1	-	7044	6	FSM	ENSMUSG00000026374.15	ENSMUST00000027623.9	7063	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATATATTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118239137	118222517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_118228768_118232420_118232501_118232929_118233046_118236474_118236572_118237502_118237597_118238730
ENSMUSG00000026377.13_0	chr1	+	1880	7	FSM	ENSMUSG00000026377.13	ENSMUST00000027626.13	1889	7	9	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTGGGACTTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	118249577	118261552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_118249728_118251311_118251456_118255354_118255464_118257082_118257295_118258335_118258393_118260073_118260209_118260479
ENSMUSG00000026380.11_0	chr1	+	9250	15	FSM	ENSMUSG00000026380.11	ENSMUST00000027629.10	9269	15	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAACCCATGTGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	118555684	118612888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_118555833_118559971_118560124_118580030_118580108_118580598_118580705_118581445_118581553_118584097_118584251_118586737_118586849_118589709_118589802_118592488_118592538_118592627_118592722_118593845_118593937_118596360_118596465_118597118_118597262_118603304_118603357_118605117
ENSMUSG00000026383.15_0	chr1	-	6423	25	FSM	ENSMUSG00000026383.15	ENSMUST00000052404.13	6442	25	13	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTCATGTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	119576653	119472772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119476926_119477616_119477748_119478251_119478294_119481935_119482011_119482781_119482873_119495525_119495591_119497774_119497904_119500535_119500634_119506643_119506808_119526734_119526851_119527927_119527968_119532957_119532986_119535716_119535824_119536846_119537017_119543075_119543146_119544130_119544220_119545093_119545182_119545283_119545405_119547896_119547950_119548404_119548450_119549615_119549695_119551655_119551699_119561274_119561380_119570206_119570389_119576514
ENSMUSG00000026384.14_1	chr1	-	10855	27	FSM	ENSMUSG00000026384.14	ENSMUST00000064091.12	10874	27	9	10	9	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATCTAATGACTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	119765334	119580206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119587648_119595243_119595380_119603278_119603428_119606484_119606614_119607778_119607926_119610213_119610276_119610434_119610526_119612196_119612364_119615339_119615497_119619330_119619388_119619475_119619560_119620479_119620640_119633884_119634044_119635505_119635632_119643676_119643746_119649593_119649767_119653762_119653827_119669084_119669174_119671081_119671170_119692760_119692882_119693158_119693212_119693607_119693653_119700778_119700858_119700958_119701002_119711211_119711320_119730052_119730208_119764631
ENSMUSG00000026385.17_0	chr1	-	559	4	FSM	ENSMUSG00000026385.17	ENSMUST00000027634.13	569	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4747	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTGTCTGGGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	120048798	120041009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_120041264_120044115_120044179_120047624_120047743_120048674
ENSMUSG00000026387.16_0	chr1	+	1974	14	FSM	ENSMUSG00000026387.16	ENSMUST00000072886.11	2012	14	30	8	30	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGCCTAGCCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119934653	119991258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_119935062_119949887_119950003_119950195_119950241_119959293_119959402_119964064_119964169_119971180_119971279_119972360_119972494_119974388_119974543_119981403_119981465_119982001_119982072_119983114_119983207_119984123_119984251_119989623_119989666_119990841
ENSMUSG00000026388.16_0	chr1	+	481	6	FSM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTTGGTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	120048924	120115912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_120048948_120078332_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ENSMUSG00000026388.16_1	chr1	+	447	5	ISM	ENSMUSG00000026388.16	ENSMUST00000112644.9	488	6	29419	7	29414	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCTTGGTTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	120078343	120115912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_120078478_120088335_120088387_120093864_120093903_120099130_120099213_120115770
ENSMUSG00000026389.17_0	chr1	-	5143	6	FSM	ENSMUSG00000026389.17	ENSMUST00000112641.8	5158	6	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTTTTATTTCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	120198797	120152115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197712_120197990_120198667
ENSMUSG00000026389.17_1	chr1	-	2747	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATTACAATAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	120193014	120154157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120192961
ENSMUSG00000026389.17_2	chr1	-	2692	4	ISM	ENSMUSG00000026389.17	ENSMUST00000112640.8	2752	5	21019	5	21019	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATTACAATAGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	120171995	120154157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497
ENSMUSG00000026389.17_3	chr1	-	2927	5	FSM	ENSMUSG00000026389.17	ENSMUST00000112639.8	2931	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACCCTGTCGCCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	120198153	120154365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197712
ENSMUSG00000026389.17_4	chr1	-	2852	6	FSM	ENSMUSG00000026389.17	ENSMUST00000112643.2	2873	6	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAATAATAGGGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	120200421	120154389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_120155659_120161971_120162137_120169161_120169690_120171497_120171998_120197854_120197990_120200166
ENSMUSG00000026393.11_0	chr1	-	5246	10	FSM	ENSMUSG00000026393.11	ENSMUST00000186017.7	5258	10	9	3	-4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138547478	138410615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUSG00000026393.11_1	chr1	-	4316	10	FSM	ENSMUSG00000026393.11	ENSMUST00000187407.7	4336	10	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGTCAGAAAGGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	138547868	138411583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547641
ENSMUSG00000026393.11_2	chr1	-	3718	8	FSM	ENSMUSG00000026393.11	ENSMUST00000027642.5	3737	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAGTTTTAGTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	138547400	138411856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138414849_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547289
ENSMUSG00000026393.11_3	chr1	-	1006	10	FSM	ENSMUSG00000026393.11	ENST00000538004.5	1024	10	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACCTAAACTGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	138547466	138414747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440_138489524_138547385
ENSMUSG00000026393.11_4	chr1	-	926	9	ISM	ENSMUSG00000026393.11	ENST00000538004.5	1024	10	57950	10	57888	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACCTAAACTGTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	138489524	138414747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_138414849_138426313_138426428_138430308_138430404_138443362_138443471_138444265_138444375_138460474_138460586_138462101_138462165_138471940_138472082_138489440
ENSMUSG00000026394.6_0	chr1	+	422	3	FSM	ENSMUSG00000026394.6	ENST00000309309.11	436	3	9	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGCTCCACACATCCAA	NA	NA	NA	NA	NA	NA	NA	NA	138201480	138215697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_138201586_138211360_138211505_138215524
ENSMUSG00000026398.15_0	chr1	-	3051	7	FSM	ENSMUSG00000026398.15	ENST00000236914.7	3071	7	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTATTAATACTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	136888254	136771857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_136773449_136810001_136810150_136818420_136818541_136868146_136868788_136871024_136871167_136872696_136872816_136887964
ENSMUSG00000026399.13_0	chr1	-	2499	10	FSM	ENSMUSG00000026399.13	ENSMUST00000027650.13	2533	10	13	21	13	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAGAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	130390468	130366784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_130368117_130375355_130375377_130376064_130376146_130377153_130377301_130380120_130380313_130384557_130384644_130385823_130385924_130387318_130387511_130389558_130389745_130390306
ENSMUSG00000026404.13_0	chr1	+	2148	8	FSM	ENSMUSG00000026404.13	ENSMUST00000027655.8	2166	8	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGCAATATCGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	136343015	136367885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136343162_136344319_136345135_136347147_136347316_136352532_136352623_136360049_136360302_136361450_136361604_136362243_136362373_136367490
ENSMUSG00000026407.18_0	chr1	+	5947	43	FSM	ENSMUSG00000026407.18	ENST00000681874.1	5964	43	17	0	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGCACCTGGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	135980575	136047259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135980791_135982316_135982423_135996658_135996799_135998371_135998515_135998647_135998801_136001244_136001451_136002804_136002909_136004464_136004611_136005366_136005449_136007216_136007378_136011952_136012179_136013029_136013238_136014421_136014543_136015061_136015177_136016040_136016135_136016757_136016828_136019435_136019569_136020324_136020455_136022618_136022726_136023200_136023289_136023507_136023616_136024815_136024869_136025102_136025250_136025909_136026112_136026269_136026429_136028337_136028449_136029216_136029301_136032307_136032365_136033185_136033315_136033521_136033588_136034139_136034232_136034754_136034915_136035817_136035946_136038603_136038701_136039715_136039819_136040647_136040750_136041020_136041146_136042885_136043015_136043662_136043914_136045344_136045431_136046073_136046166_136046398_136046552_136046694
ENSMUSG00000026409.15_0	chr1	-	3329	14	FSM	ENSMUSG00000026409.15	ENSMUST00000171479.8	3342	14	4	9	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAGGTACAATGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	130642308	130616927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_130618886_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202
ENSMUSG00000026409.15_1	chr1	-	2785	14	ISM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	1201	7	-1	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGTACTTTTTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	130642314	130624414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202
ENSMUSG00000026409.15_2	chr1	-	2842	15	FSM	ENSMUSG00000026409.15	ENSMUST00000169659.8	2849	15	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGTACTTTTTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	130643515	130624414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_130625823_130626415_130626481_130626924_130626988_130627717_130627848_130628506_130628612_130629441_130629589_130629967_130630176_130633113_130633239_130634162_130634220_130634579_130634655_130634788_130634856_130635245_130635343_130635812_130635939_130642202_130642314_130643457
ENSMUSG00000026411.18_0	chr1	+	1796	6	FSM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCTAAGCAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	135945710	135963076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135945801_135946243_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026411.18_4	chr1	+	1709	5	ISM	ENSMUSG00000026411.18	ENSMUST00000063719.15	1806	6	536	4	-13	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCTAAGCAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	135946240	135963076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_135946346_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026411.18_5	chr1	+	1384	5	FSM	ENSMUSG00000026411.18	ENST00000367332.5	1393	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTGCAGATCTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	135946262	135962764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135946355_135947395_135947488_135952355_135952465_135955134_135955267_135961805
ENSMUSG00000026413.13_0	chr1	-	4648	14	FSM	ENSMUSG00000026413.13	ENSMUST00000027667.13	4669	14	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTTCTCAAGCCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	135846930	135799138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135801388_135803335_135803443_135804808_135804897_135805410_135805598_135805859_135806014_135807583_135807761_135808459_135808616_135810218_135810334_135811634_135811813_135812642_135812851_135814470_135814616_135817429_135817825_135836613_135836721_135846548
ENSMUSG00000026414.14_0	chr1	+	1174	14	NNC	ENSMUSG00000026414.14	novel	1200	16	NA	NA	4	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACTGCACATATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	135764095	135779989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_135764185_135768602_135768655_135771516_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026414.14_117	chr1	+	1031	12	ISM	ENSMUSG00000026414.14	ENSMUST00000179863.8	1097	15	2905	10	2905	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACTGCACATATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	135771517	135779988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026414.14_120	chr1	+	1007	11	NNC	ENSMUSG00000026414.14	novel	1076	14	NA	NA	-2163	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACTGCACATATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	135773290	135779988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777203_135778443_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026414.14_131	chr1	+	554	6	FSM	ENSMUSG00000026414.14	ENST00000438742.6	564	6	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAAATACGAAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	135775453	135779166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135775511_135775718_135775836_135776548_135776627_135777087_135777203_135778448_135778559_135779089
ENSMUSG00000026414.14_34	chr1	+	1105	14	NNC	ENSMUSG00000026414.14	novel	1112	15	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGCACATATGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	135764150	135779991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_135764185_135768598_135768651_135769638_135769650_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777203_135778443_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026414.14_65	chr1	+	1063	13	NNC	ENSMUSG00000026414.14	novel	1064	14	NA	NA	-6	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGCACATATGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	135768606	135779991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_135768651_135769638_135769650_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777203_135778443_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026414.14_9	chr1	+	1149	14	NNC	ENSMUSG00000026414.14	novel	1172	16	NA	NA	2	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGCACATATGGAATAG	NA	NA	NA	NA	NA	NA	NA	NA	135764125	135779991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_135764185_135768598_135768655_135771517_135771553_135773292_135773383_135773635_135773672_135774459_135774494_135775446_135775511_135775718_135775836_135776548_135776627_135777087_135777199_135778448_135778559_135779089_135779181_135779433_135779475_135779764
ENSMUSG00000026418.17_0	chr1	+	1093	9	NIC	ENSMUSG00000026418.17	novel	1105	10	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135727147	135738727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_135727235_135727710_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026418.17_9	chr1	+	1008	8	NIC	ENSMUSG00000026418.17	novel	1150	9	NA	NA	138	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTCTGTAGCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	135727708	135738727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_135727759_135730331_135730362_135732790_135732833_135733236_135733369_135735258_135735349_135736370_135736548_135737363_135737474_135738350
ENSMUSG00000026421.15_0	chr1	+	1802	6	FSM	ENSMUSG00000026421.15	ENSMUST00000097561.9	1828	6	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGAACTCTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	135647815	135679961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135647932_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026421.15_2	chr1	+	1801	6	FSM	ENSMUSG00000026421.15	ENSMUST00000027677.8	1823	6	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGAACTCTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	135656897	135679961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135657013_135667137_135667251_135672996_135673166_135674457_135674588_135678302_135678397_135678781
ENSMUSG00000026425.16_0	chr1	-	6649	21	FSM	ENSMUSG00000026425.16	ENST00000573034.8	6670	21	15	6	15	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTTGCCGCTGTACGTC	NA	NA	NA	NA	NA	NA	NA	NA	131453319	131214236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131217479_131220258_131220584_131224057_131224205_131226069_131226251_131228130_131228211_131238211_131238437_131244866_131244973_131247262_131247398_131248172_131248251_131252825_131252887_131259854_131259880_131264101_131264213_131272086_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
ENSMUSG00000026425.16_20	chr1	-	3049	10	FSM	ENSMUSG00000026425.16	ENST00000612199.4	3075	10	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAGAAAATAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	131453325	131270807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131271318_131271486_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675
ENSMUSG00000026425.16_21	chr1	-	3168	11	FSM	ENSMUSG00000026425.16	ENST00000367123.8	3195	11	10	17	2	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAGAAGAAAATAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	131455083	131270807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131271318_131271486_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131339537_131339701_131364412_131364606_131452675_131453332_131454970
ENSMUSG00000026425.16_28	chr1	-	1438	7	FSM	ENSMUSG00000026425.16	ENST00000619678.1	1450	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAGCTTTAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	131453092	131271998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131272285_131273499_131273602_131277189_131277415_131283248_131283378_131284427_131284644_131291739_131291803_131452675
ENSMUSG00000026426.11_0	chr1	+	1700	7	FSM	ENSMUSG00000026426.11	ENSMUST00000027684.11	1713	7	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTGTGTATGGTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	135074574	135084007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135074839_135080208_135080290_135080530_135080605_135081913_135082008_135082145_135082214_135082450_135082522_135082959
ENSMUSG00000026427.17_0	chr1	+	1995	15	FSM	ENSMUSG00000026427.17	ENSMUST00000068805.14	2009	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGCTTTTATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	131080924	131101208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131081163_131081965_131082157_131082904_131082989_131083369_131083461_131085928_131086037_131088146_131088362_131089021_131089140_131091256_131091303_131092139_131092244_131092356_131092507_131092856_131092947_131094063_131094160_131095856_131095978_131098673_131098849_131101040
ENSMUSG00000026429.10_0	chr1	+	1098	7	FSM	ENSMUSG00000026429.10	ENSMUST00000027687.8	1116	7	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAAGTGTGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	134890312	134901892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134890525_134895464_134895637_134896978_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537
ENSMUSG00000026429.10_2	chr1	+	649	6	FSM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAAGTGTGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	134896980	134901892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134897049_134898987_134899094_134899638_134899738_134899843_134899928_134901537_134901764_134901826
ENSMUSG00000026429.10_3	chr1	+	579	5	ISM	ENSMUSG00000026429.10	ENST00000646651.1	657	6	2011	6	2011	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAAGTGTGTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	134898989	134901892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_134899094_134899638_134899738_134899843_134899928_134901537_134901764_134901826
ENSMUSG00000026430.17_0	chr1	-	3461	6	FSM	ENSMUSG00000026430.17	ENSMUST00000027688.15	3485	6	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGTAAAAACAAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	131172984	131104159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131106415_131108289_131108406_131108890_131109189_131109880_131109992_131139993_131140116_131172425
ENSMUSG00000026430.17_1	chr1	-	3360	6	FSM	ENSMUSG00000026430.17	ENSMUST00000112442.2	3388	6	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGTAAAAACAAGTCACGA	NA	NA	NA	NA	NA	NA	NA	NA	131172980	131104159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131106415_131108289_131108406_131108987_131109189_131109880_131109992_131139993_131140116_131172425
ENSMUSG00000026433.14_0	chr1	+	1180	5	FSM	ENSMUSG00000026433.14	ENSMUST00000112386.8	1202	5	19	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCATGTGCATCTGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	131794980	131800474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUSG00000026433.14_1	chr1	+	1217	6	FSM	ENSMUSG00000026433.14	ENSMUST00000027693.8	1226	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGAATTGTGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	131794977	131800616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131795149_131795256_131795514_131797670_131797743_131798417_131798600_131799804_131799927_131800203
ENSMUSG00000026434.13_0	chr1	+	2370	7	FSM	ENSMUSG00000026434.13	ENSMUST00000189946.7	2375	7	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCACATTCAGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	131838273	131860414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857353_131857501_131858771
ENSMUSG00000026434.13_1	chr1	+	5981	7	FSM	ENSMUSG00000026434.13	ENSMUST00000062264.8	5998	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCAGATGTGTGCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	131838304	131864053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131838489_131846742_131846793_131849680_131849787_131852323_131852380_131855801_131855955_131857350_131857501_131858771
ENSMUSG00000026435.16_0	chr1	+	3192	5	FSM	ENSMUSG00000026435.16	ENSMUST00000177943.8	3212	5	14	6	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATATGTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	131890718	131910701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131890791_131904455_131904851_131905150_131905937_131906485_131906752_131909028
ENSMUSG00000026435.16_1	chr1	+	3122	4	ISM	ENSMUSG00000026435.16	ENSMUST00000027695.8	3340	5	6107	1	6107	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATATGTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	131904453	131910701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_131904851_131905150_131905937_131906485_131906752_131909028
ENSMUSG00000026436.16_0	chr1	+	4409	5	FSM	ENSMUSG00000026436.16	ENSMUST00000086556.12	4433	5	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAGTAACCTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	131935361	131954179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131935679_131942120_131942337_131945330_131946201_131947087_131947205_131951290
ENSMUSG00000026437.12_0	chr1	-	4342	16	FSM	ENSMUSG00000026437.12	ENSMUST00000027697.12	4355	16	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCAAGGGCTGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	132067417	132039982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132042709_132043202_132043281_132043599_132043691_132044184_132044228_132044333_132044440_132044621_132044720_132045219_132045341_132045487_132045612_132046258_132046322_132046587_132046683_132046837_132046953_132047705_132047763_132049185_132049312_132049774_132049855_132050049_132050199_132067147
ENSMUSG00000026439.15_0	chr1	+	2828	14	FSM	ENSMUSG00000026439.15	ENSMUST00000190997.7	2856	14	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAATGGATTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	132405122	132432617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132405266_132411789_132411816_132412483_132412657_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425860_132431501
ENSMUSG00000026439.15_1	chr1	+	3375	15	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACCACAAGTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	132405179	132433391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_132405266_132411789_132411816_132412483_132412540_132413185_132413247_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ENSMUSG00000026439.15_7	chr1	+	3290	14	NNC	ENSMUSG00000026439.15	novel	3385	15	NA	NA	6616	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACCACAAGTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	132411788	132433391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_132411816_132412483_132412540_132413185_132413247_132417325_132417467_132418160_132418324_132420290_132420401_132421552_132421673_132421758_132421913_132422007_132422080_132422594_132422713_132423943_132424014_132424536_132424767_132425667_132425746_132431501
ENSMUSG00000026442.15_0	chr1	-	6362	28	FSM	ENSMUSG00000026442.15	ENST00000401399.5	6372	28	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACCAGCGGTCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	132593315	132495703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132498390_132501507_132501578_132504023_132504156_132510732_132510886_132512101_132512219_132515811_132516049_132523210_132523396_132524263_132524387_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132534740_132534786_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132565601_132565620_132570415_132570597_132593216
ENSMUSG00000026442.15_24	chr1	-	4099	26	FSM	ENSMUSG00000026442.15	ENST00000513543.6	4106	26	7	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTCATTGTCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	132593320	132497762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132498390_132501507_132501578_132504023_132504156_132523221_132523396_132524263_132524387_132525502_132525708_132527836_132527953_132529708_132529932_132531535_132531607_132532778_132532977_132533221_132533324_132536120_132536246_132537494_132537643_132538048_132538216_132538512_132538625_132539267_132539412_132547126_132547259_132548662_132548848_132549249_132549362_132555609_132555661_132559422_132559594_132561905_132562029_132562361_132562559_132564723_132564830_132570415_132570597_132593216
ENSMUSG00000026450.15_0	chr1	+	2037	10	FSM	ENSMUSG00000026450.15	ENST00000367229.6	2051	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCAAGACAAGCGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	134070984	134079877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134071180_134071748_134071806_134072989_134073156_134073328_134073454_134074299_134074424_134076073_134076260_134077113_134077222_134078216_134078344_134078841_134079317_134079403
ENSMUSG00000026455.15_0	chr1	+	3213	12	FSM	ENSMUSG00000026455.15	ENSMUST00000112232.8	3220	12	2	5	2	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	134383270	134418606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416753_134416860_134417069
ENSMUSG00000026455.15_1	chr1	+	3403	12	FSM	ENSMUSG00000026455.15	ENSMUST00000027725.11	3408	12	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTGGATTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	134383273	134418756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134383404_134386203_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUSG00000026455.15_2	chr1	+	3266	12	FSM	ENSMUSG00000026455.15	ENSMUST00000116528.2	3277	12	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGCTTTAAGAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	134383298	134418606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134383404_134386165_134386405_134391564_134391719_134395388_134395607_134400131_134400282_134403525_134403641_134411484_134411592_134413455_134413652_134414747_134414907_134415381_134415481_134416672_134416860_134417069
ENSMUSG00000026456.19_0	chr1	+	1822	9	FSM	ENSMUSG00000026456.19	ENSMUST00000027726.14	1837	9	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1761	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGAATCATTGTCGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	134333526	134339471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134333792_134334050_134334201_134334336_134334410_134334783_134334891_134335311_134335442_134336141_134336226_134337338_134337425_134338230_134338331_134338644
ENSMUSG00000026457.15_0	chr1	+	3107	8	FSM	ENSMUSG00000026457.15	ENSMUST00000027727.15	3123	8	10	6	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTGATGTCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134343125	134361083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134343324_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026457.15_9	chr1	+	3432	8	FSM	ENSMUSG00000026457.15	ENSMUST00000112237.2	3446	8	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTGATGTCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134343204	134361083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134343728_134350658_134350894_134351695_134351813_134352488_134352661_134353646_134353834_134355819_134356008_134358794_134358989_134359267
ENSMUSG00000026458.14_0	chr1	-	6053	29	FSM	ENSMUSG00000026458.14	ENSMUST00000168515.8	6067	29	3	11	3	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAATGTACAAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	134260663	134224531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134226567_134226763_134226875_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239266_134239294_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252333_134254221_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027
ENSMUSG00000026458.14_3	chr1	-	2380	15	FSM	ENSMUSG00000026458.14	ENST00000599966.5	2396	15	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTGGCCTTCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	134247156	134226102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952
ENSMUSG00000026458.14_5	chr1	-	4482	29	FSM	ENSMUSG00000026458.14	ENST00000367240.6	4487	29	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATTGGCCTTCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	134272440	134226102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134226567_134227028_134227207_134228207_134228277_134231342_134231519_134232024_134232123_134237313_134237490_134239266_134239294_134239794_134239858_134240273_134240475_134240824_134240907_134241367_134241462_134244352_134244517_134244800_134244935_134245175_134245212_134245545_134245787_134246952_134247162_134248798_134248908_134250739_134250832_134251816_134251949_134252248_134252327_134254217_134254357_134254553_134254701_134254995_134255188_134255737_134255828_134256030_134256106_134256381_134256547_134256883_134256986_134260027_134260667_134272330
ENSMUSG00000026459.6_0	chr1	+	1482	3	FSM	ENSMUSG00000026459.6	ENSMUST00000027730.6	1495	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGAGCATCTGCAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	134217735	134220282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134218265_134218830_134218913_134219411
ENSMUSG00000026463.18_0	chr1	-	11711	21	FSM	ENSMUSG00000026463.18	ENSMUST00000143567.8	11725	21	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTTAGCTTCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	133728765	133627194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826_133681488_133728374
ENSMUSG00000026463.18_3	chr1	-	8078	20	FSM	ENSMUSG00000026463.18	ENSMUST00000165602.9	8101	20	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGCTATCGTCTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	133681468	133630417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133634735_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ENSMUSG00000026463.18_4	chr1	-	4554	21	FSM	ENSMUSG00000026463.18	ENSMUST00000125659.8	4579	21	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAATACCCTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	133681406	133634060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133634735_133639379_133639561_133642791_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ENSMUSG00000026463.18_5	chr1	-	3268	19	ISM	ENSMUSG00000026463.18	ENSMUST00000112264.2	3324	20	45	1072	45	-1072	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCTGTGGTGGCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	133680974	133642790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_133642969_133644242_133644351_133645525_133645738_133646437_133646652_133647061_133647254_133654194_133654302_133655460_133655549_133656434_133656615_133657454_133657687_133658106_133658349_133659400_133659644_133659963_133660179_133662785_133662948_133664353_133664390_133665727_133665857_133666275_133666402_133666900_133667159_133667651_133667850_133680826
ENSMUSG00000026466.17_0	chr1	-	4223	10	FSM	ENSMUSG00000026466.17	ENSMUST00000097527.10	4234	10	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTATGTTATAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	155912162	155880359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155883456_155889063_155889121_155893256_155893326_155893963_155894006_155898045_155898127_155898894_155898934_155906132_155906178_155907159_155907220_155909471_155909547_155911503
ENSMUSG00000026469.15_1	chr1	-	7462	15	FSM	ENSMUSG00000026469.15	ENSMUST00000027741.12	7492	15	25	5	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTCTGGCCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	155293050	155151451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155156817_155158958_155159181_155165940_155166078_155168854_155169022_155183367_155183563_155184696_155184869_155188504_155188685_155188916_155189108_155200059_155200142_155204344_155204429_155206083_155206234_155207908_155208133_155221298_155221401_155260356_155260409_155292911
ENSMUSG00000026470.15_0	chr1	+	4575	8	FSM	ENSMUSG00000026470.15	ENSMUST00000027743.13	4589	8	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGATGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	155034468	155081399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155034674_155049731_155049902_155053599_155053695_155063523_155063587_155067174_155067301_155068964_155069072_155073086_155073182_155077685
ENSMUSG00000026471.15_0	chr1	-	2495	6	FSM	ENSMUSG00000026471.15	ENSMUST00000027744.10	2512	6	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTTTTAGACCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	155022516	155003627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155005072_155006378_155006478_155008105_155008382_155012320_155012597_155013259_155013521_155022377
ENSMUSG00000026471.15_5	chr1	-	613	3	FSM	ENSMUSG00000026471.15	ENST00000282990.10	628	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGTCACAAGGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	155013510	155006391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155006478_155012320_155012597_155013259
ENSMUSG00000026471.15_6	chr1	-	804	4	FSM	ENSMUSG00000026471.15	ENST00000617803.5	817	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGTCACAAGGTGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	155013512	155006391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155006478_155008105_155008295_155012320_155012597_155013259
ENSMUSG00000026473.17_0	chr1	+	2740	7	FSM	ENSMUSG00000026473.17	ENSMUST00000086199.12	2792	7	23	29	23	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	153775712	153785440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_153775806_153778679_153778859_153780282_153780445_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026473.17_1	chr1	+	2767	7	NNC	ENSMUSG00000026473.17	novel	2792	7	NA	NA	0	-29	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	153775689	153785440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_153775806_153778679_153778859_153780282_153780449_153782094_153782242_153782765_153782894_153783031_153783232_153783609
ENSMUSG00000026475.8_0	chr1	+	2321	5	FSM	ENSMUSG00000026475.8	ENSMUST00000027748.8	2339	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCAATATTTCCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	153616103	153621205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_153616259_153616608_153616720_153617365_153617428_153617708_153617876_153619379
ENSMUSG00000026478.15_0	chr1	-	7612	28	FSM	ENSMUSG00000026478.15	ENSMUST00000027752.15	7622	28	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTTGTGTGGCCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	153208523	153094668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153097476_153099404_153099505_153102129_153102289_153103256_153103457_153104480_153104596_153104787_153104938_153106467_153106613_153107479_153107618_153109230_153109311_153110193_153110400_153115000_153115158_153116062_153116242_153117622_153117766_153118374_153118529_153118976_153119223_153122683_153122873_153122982_153123205_153124785_153124899_153125310_153125501_153125590_153125714_153126132_153126270_153126357_153126457_153126822_153126941_153127697_153127887_153130934_153131102_153133821_153133953_153138135_153138441_153207873
ENSMUSG00000026479.14_0	chr1	-	5154	24	FSM	ENSMUSG00000026479.14	ENSMUST00000027753.13	5164	24	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	153062183	152998501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654_153061848_153061999
ENSMUSG00000026479.14_1	chr1	-	4910	23	FSM	ENSMUSG00000026479.14	ENSMUST00000185356.7	4916	23	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGTTTCTGATTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	153061787	152998501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153000030_153002561_153002662_153002751_153002911_153004702_153004903_153005781_153005897_153006395_153006546_153007568_153007714_153009344_153009495_153010522_153010603_153012443_153012650_153012936_153013100_153015471_153015618_153017271_153017518_153019471_153019655_153020259_153020479_153021384_153021498_153024673_153024864_153026489_153026613_153027782_153027920_153030137_153030237_153034597_153034734_153041864_153042054_153061654
ENSMUSG00000026482.14_0	chr1	-	5071	19	FSM	ENSMUSG00000026482.14	ENSMUST00000111859.8	5092	19	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTTGTATTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	152642040	152392515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152499568_152499680_152550610_152550775_152641657
ENSMUSG00000026482.14_1	chr1	-	4552	18	FSM	ENSMUSG00000026482.14	ENSMUST00000027760.14	4572	18	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCCAAGTGGGTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	152500957	152392710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152499568_152499680_152500734
ENSMUSG00000026482.14_2	chr1	-	3031	18	FSM	ENSMUSG00000026482.14	ENSMUST00000111857.3	3037	18	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTATGCGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	152642098	152394502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152394948_152397045_152397161_152400395_152400651_152404023_152404211_152407256_152407347_152409256_152409379_152412017_152412051_152413481_152413569_152415687_152415778_152420101_152420187_152424817_152424922_152428171_152428388_152430046_152430172_152433153_152433339_152447348_152447427_152462157_152462367_152550610_152550775_152641657
ENSMUSG00000026483.14_0	chr1	+	6522	14	FSM	ENSMUSG00000026483.14	ENSMUST00000148810.8	6531	14	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACATTCACAGTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	151447125	151597683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151447336_151512154_151512286_151517178_151517311_151520625_151520741_151525029_151525195_151565269_151565386_151571440_151571546_151571875_151572039_151575859_151576048_151579452_151579615_151581737_151581849_151584847_151584956_151591410_151591523_151592979
ENSMUSG00000026484.14_2	chr1	-	3142	7	FSM	ENSMUSG00000026484.14	ENSMUST00000076110.11	3160	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGTGAAGTTATTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	151376695	151345163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_151347169_151347388_151347561_151348822_151349096_151351890_151352107_151352622_151352784_151354287_151354377_151376469
ENSMUSG00000026484.14_4	chr1	-	719	5	FSM	ENSMUSG00000026484.14	ENST00000511357.2	733	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAACCTGGATACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151354368	151347459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_151347561_151348822_151349096_151351890_151351998_151352626_151352784_151354287
ENSMUSG00000026489.14_0	chr1	-	3997	15	FSM	ENSMUSG00000026489.14	ENSMUST00000027766.13	4026	15	21	8	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTATCAAATAAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	180023564	179992810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_179995022_179995886_179995974_179996135_179996202_179996337_179996446_179996644_179996787_179996980_179997075_179997197_179997280_179997626_179997768_179997907_179997994_179999128_179999252_180001815_180001891_180006141_180006209_180006447_180006850_180009626_180009813_180023437
ENSMUSG00000026490.19_0	chr1	+	6694	35	FSM	ENSMUSG00000026490.19	ENSMUST00000097453.9	6704	35	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAGGGGACGGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	179788045	179990720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUSG00000026490.19_17	chr1	+	4909	35	FSM	ENSMUSG00000026490.19	ENSMUST00000076687.12	4917	35	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGCCCAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	179788674	179989723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUSG00000026490.19_18	chr1	+	5152	36	FSM	ENSMUSG00000026490.19	ENSMUST00000097450.10	5160	36	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGCCCAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	179788674	179989723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUSG00000026490.19_19	chr1	+	5232	38	FSM	ENSMUSG00000026490.19	ENSMUST00000212756.2	5247	38	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATGAGCCCAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	179788681	179989723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179946300_179946349_179951488_179951528_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUSG00000026490.19_8	chr1	+	9134	37	FSM	ENSMUSG00000026490.19	ENSMUST00000111117.8	9161	37	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTCAGCATTGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	179788168	179993160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179788853_179826926_179827019_179859069_179859154_179864393_179864490_179867616_179867766_179889354_179889449_179892530_179892732_179894715_179894965_179896861_179896942_179899909_179900077_179902134_179902258_179911936_179912071_179921508_179921752_179921945_179922057_179928589_179928838_179933611_179933718_179936718_179936844_179938828_179938935_179939309_179939459_179941587_179941680_179945231_179945309_179951488_179951528_179961861_179961946_179964216_179964323_179965294_179965432_179965996_179966137_179967287_179967370_179968906_179969124_179969841_179969905_179971971_179972566_179974509_179974608_179976717_179976803_179977699_179977824_179978724_179978843_179987170_179987289_179989104_179989263_179989599
ENSMUSG00000026491.14_0	chr1	-	8219	34	FSM	ENSMUSG00000026491.14	ENST00000366508.5	8234	34	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCATGTCGGTGTGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	179626889	179572391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583199_179587748_179587918_179590074_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775
ENSMUSG00000026491.14_19	chr1	-	8462	36	FSM	ENSMUSG00000026491.14	ENSMUST00000027768.14	8506	36	28	16	28	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTGACAAGAGAAATACT	NA	NA	NA	NA	NA	NA	NA	NA	179631217	179572474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_179574094_179574744_179574822_179576121_179576256_179579875_179581638_179583013_179583220_179585499_179585595_179587826_179587927_179590109_179590528_179591034_179591239_179593442_179593636_179595859_179595968_179596553_179596705_179596873_179597025_179598153_179598286_179598363_179598509_179602896_179603085_179603572_179603720_179605067_179605125_179605264_179605389_179607168_179607263_179608420_179608526_179609207_179609349_179610511_179610602_179611654_179611746_179612572_179612702_179613634_179613697_179614259_179614442_179614532_179614666_179615753_179615905_179617213_179617299_179617863_179617981_179619910_179620119_179621207_179621389_179623241_179623496_179626775_179626904_179630917
ENSMUSG00000026492.12_0	chr1	-	2434	8	FSM	ENSMUSG00000026492.12	ENSMUST00000027769.6	2449	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGTTTGTGTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	179373822	179355624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_179356920_179358868_179359030_179359629_179359693_179361197_179361288_179365263_179365413_179369871_179370023_179372462_179372552_179373386
ENSMUSG00000026494.13_0	chr1	+	13727	15	FSM	ENSMUSG00000026494.13	ENSMUST00000161017.8	13749	15	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTACCCAGAGTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	178356705	178766759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_178357191_178357953_178358356_178506390_178506925_178543367_178543535_178649047_178649232_178692410_178692618_178696910_178697005_178698161_178698425_178701536_178701721_178711479_178711640_178741253_178741417_178742326_178745742_178755723_178755927_178756408_178756560_178759644
ENSMUSG00000026495.9_0	chr1	+	3574	7	FSM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCTGGGACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	178233667	178312072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_178233699_178264966_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUSG00000026495.9_1	chr1	+	3537	6	ISM	ENSMUSG00000026495.9	ENSMUST00000027775.9	3580	7	31305	6	31305	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCAGCTGGGACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	178264972	178312072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_178265052_178283380_178283454_178302446_178302527_178303249_178303293_178303389_178303457_178308877
ENSMUSG00000026496.12_0	chr1	+	3859	23	FSM	ENSMUSG00000026496.12	ENSMUST00000027777.12	3873	23	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTACTCTCGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	180396500	180428812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411472_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157_180427220_180427660_180427776_180428014
ENSMUSG00000026496.12_12	chr1	+	2821	21	FSM	ENSMUSG00000026496.12	ENST00000413631.1	2838	21	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTACTGTCCCTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	180396609	180427215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180396719_180401216_180401383_180405147_180405264_180406718_180406934_180408097_180408201_180410322_180410440_180411294_180411460_180413407_180413556_180414825_180414967_180415485_180415726_180415923_180415993_180416214_180416348_180416962_180417159_180418782_180418912_180420412_180420497_180421607_180421731_180422219_180422349_180424854_180424954_180425775_180425929_180426517_180426646_180427157
ENSMUSG00000026499.6_0	chr1	+	3456	8	FSM	ENSMUSG00000026499.6	ENSMUST00000027780.6	3471	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTTAATTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	180553617	180581764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180553944_180560730_180560873_180561941_180562083_180564256_180564416_180566027_180566203_180572635_180572823_180574358_180574644_180579723
ENSMUSG00000026500.7_0	chr1	+	460	4	FSM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTATTGTTTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	178146699	178150252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_178146774_178149309_178149425_178149506_178149571_178150045
ENSMUSG00000026500.7_3	chr1	+	386	3	ISM	ENSMUSG00000026500.7	ENSMUST00000027781.7	471	4	2615	6	2615	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTATTGTTTTACATG	NA	NA	NA	NA	NA	NA	NA	NA	178149309	178150252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_178149425_178149506_178149571_178150045
ENSMUSG00000026502.14_1	chr1	+	8781	5	FSM	ENSMUSG00000026502.14	ENSMUST00000027783.14	8802	5	11	10	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATAAAACTGTGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	178015108	178084857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_178015524_178065477_178065551_178070177_178070272_178071906_178072049_178076800
ENSMUSG00000026502.14_6	chr1	+	794	4	FSM	ENSMUSG00000026502.14	ENST00000263831.11	820	4	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATCAAAAACAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	178015321	178077182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_178015524_178065477_178065551_178071911_178072049_178076800
ENSMUSG00000026504.18_0	chr1	+	2757	18	FSM	ENSMUSG00000026504.18	ENSMUST00000027785.15	2776	18	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGAGTTGTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	176642239	176847998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_176642622_176652317_176652471_176653764_176653851_176656435_176656550_176658622_176658749_176667850_176667992_176672389_176672455_176672746_176672936_176681329_176681469_176695777_176695931_176702129_176702265_176705555_176705673_176747109_176747253_176773673_176773802_176775846_176775956_176783357_176783490_176839454_176839582_176847680
ENSMUSG00000026509.16_0	chr1	-	3214	20	NNC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	9	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3850	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACAGTCGCACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	182345080	182294831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311750_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ENSMUSG00000026509.16_3	chr1	-	3191	20	NIC	ENSMUSG00000026509.16	novel	3225	21	NA	NA	15	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACACAGTCGCACCATGC	NA	NA	NA	NA	NA	NA	NA	NA	182345074	182294831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_182295801_182297743_182297803_182298243_182298361_182300085_182300165_182300488_182300558_182301446_182301512_182304815_182304874_182306112_182306179_182307270_182307308_182309011_182309224_182311767_182311938_182314108_182314270_182315279_182315355_182316558_182316645_182317529_182317614_182318431_182318601_182319626_182319761_182320316_182320436_182339771_182339842_182344682
ENSMUSG00000026510.11_0	chr1	+	4345	18	FSM	ENSMUSG00000026510.11	ENSMUST00000117245.2	4361	18	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTCCAAGCTATTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	182236742	182289987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_182237016_182256458_182256607_182259123_182259238_182262916_182263000_182264462_182264565_182268401_182268577_182269186_182269369_182269697_182269863_182270197_182270427_182271889_182271998_182272225_182272375_182273838_182274302_182275965_182276745_182280219_182280358_182281262_182281397_182283261_182283429_182286324_182286525_182289251
ENSMUSG00000026511.8_1	chr1	+	1354	3	FSM	ENSMUSG00000026511.8	ENSMUST00000027792.6	1367	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTATAGGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	181952326	181959971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_181952541_181956248_181956318_181958900
ENSMUSG00000026516.9_0	chr1	-	9381	23	FSM	ENSMUSG00000026516.9	ENSMUST00000027797.9	9392	23	8	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATACTAGTGATCTGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	180971761	180914705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180921475_180922548_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180962356_180962630_180964437_180964496_180966635_180966733_180966818_180966872_180969890_180969965_180971615
ENSMUSG00000026516.9_6	chr1	-	2183	20	FSM	ENSMUSG00000026516.9	ENST00000469075.5	2197	20	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAGGTGAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	180969964	180922558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635_180966733_180966818_180966872_180969890
ENSMUSG00000026516.9_7	chr1	-	2052	18	ISM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	147	11	147	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAGGTGAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	180966728	180922558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635
ENSMUSG00000026516.9_9	chr1	-	2112	19	FSM	ENSMUSG00000026516.9	ENST00000469968.5	2124	19	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAAGGTGAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	180966874	180922558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180922620_180924700_180924790_180926691_180926769_180929093_180929201_180932636_180932737_180934424_180934545_180936724_180936788_180939852_180939958_180941647_180941867_180945000_180945251_180947919_180948065_180951431_180951550_180954502_180954605_180957073_180957209_180957958_180958036_180958302_180958436_180964437_180964496_180966635_180966733_180966818
ENSMUSG00000026519.17_0	chr1	+	3298	23	FSM	ENSMUSG00000026519.17	ENSMUST00000027800.15	3306	23	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCATGCTTCTTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	180770030	180802676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180770125_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026519.17_10	chr1	+	3198	22	ISM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	2529	0	2529	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	180774128	180802668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026519.17_8	chr1	+	3256	23	FSM	ENSMUSG00000026519.17	ENSMUST00000161523.8	3258	23	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCTGCCTCTCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	180771601	180802668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180771662_180774130_180774331_180776377_180776458_180779696_180779761_180780545_180780584_180782372_180782516_180783557_180783610_180783984_180784094_180785541_180785613_180787990_180788072_180788299_180788424_180788612_180788747_180789911_180790050_180790563_180790718_180793104_180793212_180793308_180793396_180794032_180794096_180796309_180796473_180797744_180797851_180799531_180799700_180800280_180800397_180800704_180800768_180801733
ENSMUSG00000026520.9_0	chr1	+	1565	7	FSM	ENSMUSG00000026520.9	ENSMUST00000027802.9	1580	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTCTAGTCTCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	180731869	180735650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180733727_180733950_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026520.9_11	chr1	+	654	5	ISM	ENSMUSG00000026520.9	ENST00000612039.4	743	6	290	12	290	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGAAGGAGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	180732312	180735191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_180732380_180733438_180733619_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026520.9_6	chr1	+	728	6	FSM	ENSMUSG00000026520.9	ENST00000612039.4	743	6	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGAAGGAGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	180732025	180735191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180732096_180732308_180732380_180733438_180733619_180734159_180734253_180734354_180734519_180735041
ENSMUSG00000026525.10_0	chr1	-	1890	4	FSM	ENSMUSG00000026525.10	ENSMUST00000027809.8	1913	4	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAAAGGCTGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	175520328	175489995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_175490721_175491092_175491345_175492875_175493196_175519735
ENSMUSG00000026526.15_0	chr1	-	2615	10	FSM	ENSMUSG00000026526.15	ENSMUST00000027810.14	2636	10	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAGAAAAGGCAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	175453191	175427950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_175429133_175431503_175431658_175433620_175433749_175435382_175435587_175437202_175437369_175439712_175439896_175442302_175442480_175444094_175444206_175446616_175446752_175453016
ENSMUSG00000026527.14_0	chr1	-	1803	13	FSM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTCGTTGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	175016791	174886661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_175016742
ENSMUSG00000026527.14_1	chr1	-	1750	12	ISM	ENSMUSG00000026527.14	ENST00000348120.6	1811	13	66234	8	66234	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTCGTTGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	174950557	174886661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_174887361_174903582_174903664_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496
ENSMUSG00000026527.14_2	chr1	-	2016	16	FSM	ENSMUSG00000026527.14	ENST00000440928.6	2024	16	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTCGTTGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	175016791	174886661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_174887361_174903582_174903664_174904389_174904444_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_174977217_174977270_174980689_174980797_175016742
ENSMUSG00000026527.14_7	chr1	-	1956	15	ISM	ENSMUSG00000026527.14	ENST00000440928.6	2024	16	36006	8	36006	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTCGTTGCTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	174980785	174886661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_174887361_174903582_174903664_174904389_174904444_174905754_174905845_174906970_174907158_174911537_174911664_174913681_174913793_174916984_174917047_174918559_174918659_174921369_174921445_174949293_174949376_174949460_174949538_174950496_174950562_174977217_174977270_174980689
ENSMUSG00000026535.10_0	chr1	-	1612	6	ISM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	5308	13	5308	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAAGCAATACTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	173805002	173790146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_173790390_173791359_173791549_173798918_173799324_173799756_173799946_173802298_173802713_173804830
ENSMUSG00000026535.10_1	chr1	-	1684	7	FSM	ENSMUSG00000026535.10	ENSMUST00000000266.9	1697	7	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGCAATACTTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	173810308	173790144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173790390_173791359_173791549_173798918_173799324_173799756_173799946_173802298_173802713_173804830_173805004_173810239
ENSMUSG00000026536.10_0	chr1	-	1762	7	FSM	ENSMUSG00000026536.10	ENSMUST00000009340.10	1785	7	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTACAAAGTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	173740597	173723918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173724210_173726909_173727099_173729185_173729609_173733038_173733198_173733697_173733895_173735162_173735448_173740379
ENSMUSG00000026544.7_0	chr1	-	1401	2	FSM	ENSMUSG00000026544.7	ENSMUST00000027826.7	1410	2	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCATGTTTCTCAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	172460521	172458331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172459394_172460182
ENSMUSG00000026546.17_0	chr1	+	1740	11	FSM	ENSMUSG00000026546.17	ENST00000368099.9	1761	11	11	10	11	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	2024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCTATTCTATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	172355366	172373413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172355483_172357376_172357520_172359647_172359793_172360097_172360269_172361512_172361696_172362777_172362908_172366045_172366193_172368053_172368168_172368751_172368946_172372658_172372884_172373241
ENSMUSG00000026547.16_0	chr1	+	1572	5	FSM	ENSMUSG00000026547.16	ENSMUST00000111230.8	1586	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	8984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATTCTGGCTGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	172327622	172334942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172327900_172332686_172332895_172333327_172333503_172333752_172333856_172334133
ENSMUSG00000026547.16_4	chr1	+	581	4	FSM	ENSMUSG00000026547.16	ENST00000524097.1	600	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCCTCTGATCATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	172332726	172334264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172332899_172333327_172333503_172333752_172333856_172334133
ENSMUSG00000026553.18_0	chr1	+	4604	33	FSM	ENSMUSG00000026553.18	ENSMUST00000135192.8	4622	33	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCCTGCTTGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	171910110	171949889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_16	chr1	+	4338	33	FSM	ENSMUSG00000026553.18	ENSMUST00000027833.12	4351	33	7	6	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCCTGCTTGCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	171910405	171949891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938216_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946407_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_24	chr1	+	3651	33	FSM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAACCCCATACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	171910458	171949344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171910517_171915118_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946467_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026553.18_46	chr1	+	3586	32	ISM	ENSMUSG00000026553.18	ENST00000647683.1	3656	33	4668	4	4668	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTAACCCCATACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	171915125	171949344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_171915233_171916663_171916738_171918505_171918587_171918730_171918808_171919811_171919922_171925240_171925351_171927234_171927335_171928945_171929082_171929776_171929860_171931675_171931827_171932752_171932820_171933683_171933760_171935878_171935962_171937352_171937493_171938055_171938142_171938243_171938383_171939431_171939595_171939690_171939838_171940592_171940783_171940900_171940997_171942311_171942401_171942589_171942714_171944492_171944583_171944753_171944864_171945581_171945660_171945819_171945889_171946467_171946545_171946753_171946941_171947024_171947136_171947443_171947606_171948796_171948992_171949266
ENSMUSG00000026554.16_0	chr1	+	2746	14	FSM	ENSMUSG00000026554.16	ENSMUST00000191689.6	2754	14	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACCTATATATTCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	171975684	172023066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171975736_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUSG00000026554.16_3	chr1	+	2843	14	FSM	ENSMUSG00000026554.16	ENSMUST00000192704.6	2859	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGGATGTATCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	171975717	172023026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171975906_171976815_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUSG00000026554.16_6	chr1	+	4627	13	FSM	ENSMUSG00000026554.16	ENSMUST00000074144.11	4656	13	26	3	26	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTTTGTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	171975770	172023953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171976889_171993414_171993486_171999895_172000549_172001509_172001651_172003049_172003145_172007473_172007585_172013862_172013936_172014421_172014480_172014919_172015028_172016505_172016637_172020084_172020205_172021351_172021469_172022122
ENSMUSG00000026556.16_0	chr1	-	5692	8	FSM	ENSMUSG00000026556.16	ENSMUST00000027837.13	5698	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTAGTGGGGGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171854862	171828532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564
ENSMUSG00000026556.16_1	chr1	-	6522	9	FSM	ENSMUSG00000026556.16	ENSMUST00000111263.9	6528	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTAGTGGGGGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171856011	171828532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171832430_171833656_171833889_171835477_171835614_171836073_171836211_171837007_171837616_171840394_171840516_171840649_171840913_171854564_171855613_171855931
ENSMUSG00000026558.14_0	chr1	-	4717	7	FSM	ENSMUSG00000026558.14	ENSMUST00000053686.9	4731	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTTTGTGGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	167112877	167050453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_167054091_167055300_167055350_167057461_167057560_167062260_167062404_167064171_167064269_167065057_167065218_167112344
ENSMUSG00000026563.14_0	chr1	+	2201	8	FSM	ENSMUSG00000026563.14	ENSMUST00000027846.8	2215	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACCCTTTTCCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	166206674	166221185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_166207046_166209695_166209788_166209965_166210032_166214234_166214333_166216130_166216341_166217404_166217557_166219391_166219555_166220136
ENSMUSG00000026564.10_0	chr1	-	4035	6	FSM	ENSMUSG00000026564.10	ENSMUST00000192369.6	4045	6	5	5	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCTTCATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	165955486	165925721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954769_165955360
ENSMUSG00000026564.10_2	chr1	-	4011	6	FSM	ENSMUSG00000026564.10	ENSMUST00000085992.4	4018	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTCTTCATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	165955458	165925721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165928956_165935541_165935760_165937620_165937853_165939599_165939695_165954638_165954773_165955360
ENSMUSG00000026565.19_0	chr1	-	12999	17	FSM	ENSMUSG00000026565.19	ENSMUST00000160260.9	13022	17	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTCACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	165830231	165692729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ENSMUSG00000026565.19_2	chr1	-	12902	16	ISM	ENSMUSG00000026565.19	ENSMUST00000111427.9	13050	17	3217	7	3169	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTCACATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	165759300	165692729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_165703618_165704545_165704635_165707698_165708045_165710615_165710688_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230
ENSMUSG00000026565.19_3	chr1	-	2506	15	ISM	ENSMUSG00000026565.19	ENSMUST00000069609.12	2402	16	3178	-206	3178	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAGAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	165759291	165703044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230
ENSMUSG00000026565.19_4	chr1	-	2552	16	FSM	ENSMUSG00000026565.19	ENSMUST00000160908.8	2591	16	7	32	3	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAAAAATTTTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	165830184	165703057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165703618_165704545_165704635_165707698_165708045_165719378_165719485_165722473_165722654_165724005_165724152_165725193_165725336_165729708_165729883_165734253_165734349_165736448_165736576_165738856_165739046_165740795_165740919_165742678_165742733_165744490_165744592_165759230_165759297_165830130
ENSMUSG00000026566.16_0	chr1	-	2270	6	FSM	ENSMUSG00000026566.16	ENSMUST00000111435.9	2285	6	13	2	-3	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGGTGTTGTCTGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	165462085	165419810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165421247_165429318_165429425_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUSG00000026566.16_1	chr1	-	2155	5	FSM	ENSMUSG00000026566.16	ENSMUST00000068705.13	2171	5	12	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTGTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	165462078	165419812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165421247_165432178_165432312_165433177_165433392_165436006_165436174_165461871
ENSMUSG00000026568.7_0	chr1	+	1012	5	FSM	ENSMUSG00000026568.7	ENSMUST00000027853.6	1025	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATACCCCCCACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	165288615	165308780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_165289081_165302522_165302564_165305789_165305875_165307035_165307148_165308471
ENSMUSG00000026571.13_0	chr1	-	4101	19	FSM	ENSMUSG00000026571.13	ENSMUST00000027856.13	4110	19	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCAGGTTATTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	165288028	165156269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165157573_165160857_165160964_165164313_165164403_165165756_165165914_165167453_165167593_165178452_165178850_165179040_165179110_165179529_165179646_165184997_165185116_165216226_165216485_165217982_165218103_165219707_165219802_165227222_165227438_165239032_165239169_165247679_165247794_165250424_165250611_165251870_165251964_165256822_165256885_165287699
ENSMUSG00000026574.6_0	chr1	+	1709	4	FSM	ENSMUSG00000026574.6	ENSMUST00000027861.6	1724	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTGCCATAAATATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	164624222	164651830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164624606_164636474_164636601_164646463_164646572_164650738
ENSMUSG00000026575.16_0	chr1	+	1723	14	FSM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	6	11	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAACAAGTGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	164135246	164264858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164135324_164135628_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026575.16_7	chr1	+	1652	13	ISM	ENSMUSG00000026575.16	ENSMUST00000193683.6	1740	14	387	6	-14	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGACTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	164135627	164264863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_164135820_164140421_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026575.16_8	chr1	+	1628	13	FSM	ENSMUSG00000026575.16	ENSMUST00000191947.6	1635	13	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCAAACAAGTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	164135642	164264857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164135820_164140424_164140508_164155861_164155970_164160180_164160348_164168297_164168409_164170782_164170834_164172787_164172996_164175342_164175449_164206927_164206993_164208209_164208279_164213268_164213371_164230538_164230647_164264584
ENSMUSG00000026576.13_0	chr1	-	2571	7	FSM	ENSMUSG00000026576.13	ENST00000367816.5	2587	7	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTCCTCACGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	164286520	164264686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329_164285818_164286413
ENSMUSG00000026576.13_1	chr1	-	2555	6	FSM	ENSMUSG00000026576.13	ENSMUST00000027863.13	2580	6	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTCCTCACGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	164285908	164264686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_164266109_164266867_164266952_164269025_164269211_164270763_164270920_164281057_164281187_164285329
ENSMUSG00000026577.14_1	chr1	-	3933	9	FSM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTAAATAACTGAATG	NA	NA	NA	NA	NA	NA	NA	NA	164135053	164117383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131472_164131494_164134007_164134086_164134715_164134924_164135010
ENSMUSG00000026577.14_2	chr1	-	3882	8	ISM	ENSMUSG00000026577.14	ENSMUST00000027866.11	3948	9	145	8	145	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAACTGAATGACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	164134908	164117376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164131472_164131494_164134007_164134086_164134715
ENSMUSG00000026577.14_3	chr1	-	2412	7	FSM	ENSMUSG00000026577.14	ENSMUST00000120447.8	2430	7	11	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTTATCATAAGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	164135047	164118964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715
ENSMUSG00000026577.14_4	chr1	-	1597	8	FSM	ENSMUSG00000026577.14	ENSMUST00000086032.4	1602	8	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATACATACCCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	164135057	164119702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_164119981_164123278_164123499_164125807_164125937_164127113_164127314_164129852_164130290_164134007_164134086_164134715_164134924_164135010
ENSMUSG00000026578.7_0	chr1	+	1897	6	FSM	ENSMUSG00000026578.7	ENSMUST00000027867.7	1909	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAATGTGTGGTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	164103159	164115410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164103331_164105742_164105884_164107435_164108384_164109959_164110107_164113809_164113965_164115075
ENSMUSG00000026580.17_0	chr1	+	3415	16	FSM	ENSMUSG00000026580.17	ENSMUST00000162746.2	3438	16	13	10	13	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTACATATGGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	163942845	163977585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163942959_163951270_163951362_163953795_163954183_163954765_163954874_163955731_163955918_163957647_163957834_163959706_163959893_163961435_163961622_163964672_163964859_163968920_163969107_163970242_163970453_163971462_163971649_163972463_163972584_163974887_163974919_163976044_163976101_163976588
ENSMUSG00000026581.15_0	chr1	+	1223	7	FSM	ENSMUSG00000026581.15	ENST00000650983.1	1240	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTAGGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	163889601	163899802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163889761_163890621_163890704_163892870_163893258_163893778_163893887_163894179_163894366_163898126_163898317_163899691
ENSMUSG00000026581.15_31	chr1	+	971	5	FSM	ENSMUSG00000026581.15	ENST00000236147.6	989	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTAGGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	163892881	163899802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163893258_163893778_163893887_163894179_163894366_163898126_163898317_163899691
ENSMUSG00000026584.15_0	chr1	+	4351	14	FSM	ENSMUSG00000026584.15	ENSMUST00000027876.11	4368	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTATTTCTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163757343	163782688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773732_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ENSMUSG00000026584.15_4	chr1	+	4288	14	FSM	ENSMUSG00000026584.15	ENSMUST00000170359.8	4288	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGGTTACAATTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	163757358	163782679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163757756_163761047_163761263_163762200_163762387_163763986_163764101_163766308_163766366_163767449_163767553_163768675_163768788_163771392_163771471_163772364_163772505_163773771_163773918_163776710_163776883_163778136_163778296_163779505_163780186_163780950
ENSMUSG00000026585.14_0	chr1	+	3997	21	FSM	ENSMUSG00000026585.14	ENSMUST00000077642.12	4012	21	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	163607160	163744672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163739640_163739707_163743293
ENSMUSG00000026585.14_3	chr1	+	3930	20	FSM	ENSMUSG00000026585.14	ENSMUST00000027877.7	3946	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTCCAACTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	163607161	163744672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163607472_163610553_163610686_163621517_163621673_163623553_163623610_163624820_163624963_163641937_163642038_163643393_163643519_163645401_163645501_163653256_163653436_163656701_163656865_163676229_163676331_163683604_163683714_163685040_163685154_163689523_163689690_163690279_163690406_163693007_163693107_163696269_163696356_163710951_163711142_163715774_163715875_163743293
ENSMUSG00000026586.17_0	chr1	-	4967	5	FSM	ENSMUSG00000026586.17	ENSMUST00000075805.13	4986	5	9	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATACAATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	163141232	163072697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163075966_163081545_163081618_163085329_163085512_163089408_163089585_163139963
ENSMUSG00000026586.17_1	chr1	-	4928	4	FSM	ENSMUSG00000026586.17	ENSMUST00000027878.14	4952	4	14	10	14	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATAATACAATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	163141265	163072697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163075966_163085329_163085512_163089408_163089585_163139963
ENSMUSG00000026586.17_2	chr1	-	6512	3	FSM	ENSMUSG00000026586.17	ENSMUST00000174397.3	6527	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCGAAAAGGCTGAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	163141226	163080438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163085512_163089408_163089585_163139963
ENSMUSG00000026589.15_0	chr1	+	4645	28	FSM	ENSMUSG00000026589.15	ENSMUST00000086130.9	4661	28	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAATGCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	157334308	157395987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157334431_157334955_157335124_157352354_157352424_157356733_157357075_157358849_157358963_157359622_157359744_157360648_157360749_157362198_157362344_157362930_157363083_157363421_157363484_157365087_157365224_157365682_157365914_157371435_157371534_157373768_157373851_157378576_157378695_157380502_157380615_157382316_157382423_157384334_157384476_157385604_157385719_157387018_157387092_157388252_157388547_157389085_157389154_157392016_157392167_157392330_157392430_157392990_157393100_157393222_157393303_157394197_157394297_157394845
ENSMUSG00000026589.15_4	chr1	+	4406	27	FSM	ENSMUSG00000026589.15	ENSMUST00000027881.15	4414	27	0	8	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAATGCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	157334379	157395987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157334431_157352354_157352424_157356733_157357075_157358849_157358963_157359622_157359744_157360648_157360749_157362198_157362344_157362930_157363083_157363421_157363484_157365087_157365224_157365682_157365914_157371435_157371534_157373768_157373851_157378576_157378695_157380502_157380615_157382316_157382423_157384334_157384476_157385604_157385719_157387018_157387092_157388252_157388547_157389085_157389154_157392016_157392167_157392330_157392430_157392990_157393100_157393222_157393303_157394197_157394297_157394845
ENSMUSG00000026589.15_5	chr1	+	4333	26	ISM	ENSMUSG00000026589.15	ENSMUST00000027881.15	4414	27	17997	8	-1340	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAATGCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	157352376	157395987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_157352424_157356733_157357075_157358849_157358963_157359622_157359744_157360648_157360749_157362198_157362344_157362930_157363083_157363421_157363484_157365087_157365224_157365682_157365914_157371435_157371534_157373768_157373851_157378576_157378695_157380502_157380615_157382316_157382423_157384334_157384476_157385604_157385719_157387018_157387092_157388252_157388547_157389085_157389154_157392016_157392167_157392330_157392430_157392990_157393100_157393222_157393303_157394197_157394297_157394845
ENSMUSG00000026589.15_6	chr1	+	4364	26	FSM	ENSMUSG00000026589.15	ENSMUST00000111700.8	4369	26	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAAATGCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	157353716	157395987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157353795_157356733_157357075_157358849_157358963_157359622_157359744_157360648_157360749_157362198_157362344_157362930_157363083_157363421_157363484_157365087_157365224_157365682_157365914_157371435_157371534_157373768_157373851_157378576_157378695_157380502_157380615_157382316_157382423_157384334_157384476_157385604_157385719_157387018_157387092_157388252_157388547_157389085_157389154_157392016_157392167_157392330_157392430_157392990_157393100_157393222_157393303_157394197_157394297_157394845
ENSMUSG00000026594.15_0	chr1	-	6848	19	FSM	ENSMUSG00000026594.15	ENSMUST00000172057.8	6863	19	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAAAGTATAGATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156767168	156631746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156735208_156735349_156767058
ENSMUSG00000026594.15_10	chr1	-	2914	17	FSM	ENSMUSG00000026594.15	ENSMUST00000189316.7	2924	17	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTCTTGTATCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	156767127	156644093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUSG00000026594.15_11	chr1	-	2832	16	ISM	ENSMUSG00000026594.15	ENSMUST00000189316.7	2924	17	31802	0	31053	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTCTTGTATCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	156735335	156644093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208
ENSMUSG00000026594.15_2	chr1	-	4230	19	FSM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCAGACCGACTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	156767112	156634335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUSG00000026594.15_3	chr1	-	4180	18	ISM	ENSMUSG00000026594.15	ENSMUST00000027886.14	4237	19	31761	6	31036	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCAGACCGACTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	156735352	156634335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208
ENSMUSG00000026594.15_6	chr1	-	2931	20	FSM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	0	16	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTGAAAATATAAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	156767101	156635701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUSG00000026594.15_7	chr1	-	2897	19	ISM	ENSMUSG00000026594.15	ENSMUST00000063199.13	2947	20	31749	11	31036	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAAAACCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	156735352	156635696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_156636764_156639014_156639107_156641007_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208
ENSMUSG00000026594.15_8	chr1	-	2216	18	FSM	ENSMUSG00000026594.15	ENSMUST00000185198.7	2229	18	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTACATACAATATATAG	NA	NA	NA	NA	NA	NA	NA	NA	156767192	156640659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156641114_156645310_156645404_156647382_156647489_156648956_156649035_156651560_156651616_156655709_156655862_156656541_156656699_156657954_156658023_156660234_156660326_156660464_156660603_156697010_156697138_156712102_156712196_156714660_156714751_156715516_156715601_156728155_156728207_156729355_156729461_156735208_156735349_156767058
ENSMUSG00000026596.14_0	chr1	+	1831	9	FSM	ENSMUSG00000026596.14	ENST00000392043.4	1847	9	13	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGTGTTGGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	156386372	156464474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387
ENSMUSG00000026596.14_1	chr1	+	4985	12	FSM	ENSMUSG00000026596.14	ENST00000502732.6	4997	12	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGAGCCCTCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	156386372	156471479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565
ENSMUSG00000026596.14_10	chr1	+	4412	13	FSM	ENSMUSG00000026596.14	ENST00000344730.7	4426	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCAGAGCCCTCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	156443486	156471479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156443629_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ENSMUSG00000026596.14_18	chr1	+	3501	11	FSM	ENSMUSG00000026596.14	ENST00000512653.5	3509	11	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGTACCTCAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	156448407	156470397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565
ENSMUSG00000026596.14_22	chr1	+	2999	11	FSM	ENSMUSG00000026596.14	ENST00000504405.5	3017	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTAGCCATCGTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	156450061	156470278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ENSMUSG00000026596.14_3	chr1	+	3155	12	FSM	ENSMUSG00000026596.14	ENST00000507173.5	3171	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTAGCCATCGTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	156386626	156470278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156386776_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ENSMUSG00000026596.14_5	chr1	+	3222	13	FSM	ENSMUSG00000026596.14	ENST00000511413.5	3234	13	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTAGCCATCGTCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	156386622	156470278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156386776_156448408_156448472_156450054_156450226_156452857_156453154_156457422_156457696_156458914_156459000_156460649_156460828_156461322_156461508_156462634_156462788_156464387_156464478_156468008_156468183_156468565_156468800_156469111
ENSMUSG00000026600.13_0	chr1	-	8350	16	FSM	ENSMUSG00000026600.13	ENSMUST00000189661.7	8371	16	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	156301893	156252107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250_156294369_156301717
ENSMUSG00000026600.13_10	chr1	-	2908	15	FSM	ENSMUSG00000026600.13	ENSMUST00000051396.13	2925	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAAGGACATGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	156294363	156257368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156258686_156259773_156259920_156260416_156260553_156261722_156261822_156263362_156263461_156265273_156265404_156266857_156266904_156267270_156267353_156268076_156268156_156268798_156269082_156269950_156270059_156272124_156272185_156274110_156274263_156285515_156285575_156294250
ENSMUSG00000026601.15_3	chr1	-	1851	15	FSM	ENSMUSG00000026601.15	ENST00000617277.4	1866	15	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	2290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGCAGCTTAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	156246973	156176582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156176680_156178927_156179022_156193185_156193464_156208349_156208514_156209945_156210048_156215560_156215682_156219482_156219588_156220218_156220360_156223001_156223124_156225009_156225113_156226061_156226119_156227751_156227835_156230400_156230516_156245803_156245908_156246808
ENSMUSG00000026603.14_0	chr1	-	1666	12	NNC	ENSMUSG00000026603.14	novel	1680	12	NA	NA	11	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAAGCCTTGGTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	189654549	189612694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_189613064_189614305_189614415_189616020_189616199_189617495_189617617_189618717_189618829_189621011_189621115_189623596_189623665_189628767_189628893_189629619_189629681_189632014_189632126_189642047_189642112_189654303
ENSMUSG00000026604.18_0	chr1	+	10730	19	FSM	ENSMUSG00000026604.18	ENSMUST00000097442.9	10746	19	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAATACCTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	189460472	189608884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_189460862_189518832_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189565514_189565603_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ENSMUSG00000026604.18_2	chr1	+	3687	17	FSM	ENSMUSG00000026604.18	ENST00000543945.5	3703	17	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAGATAATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	189518914	189602400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_189519146_189530708_189530879_189554785_189554884_189557226_189557295_189564924_189564996_189568537_189568627_189571668_189571757_189572658_189572742_189575358_189575417_189578530_189578610_189582220_189583705_189587121_189587266_189588830_189589050_189592654_189592784_189595400_189595636_189597568_189597733_189602123
ENSMUSG00000026605.15_0	chr1	-	11098	18	FSM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	11	21	11	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	189420272	189372823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141_189417336_189420172
ENSMUSG00000026605.15_2	chr1	-	10999	17	ISM	ENSMUSG00000026605.15	ENSMUST00000171929.8	11130	18	2944	24	2944	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	189417339	189372826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_189375000_189378998_189379178_189380807_189381285_189382758_189382919_189383344_189383498_189384457_189387290_189388841_189392270_189394193_189394330_189400712_189400836_189403244_189403374_189404705_189404832_189411135_189411339_189412417_189412704_189414557_189414650_189415041_189415149_189415964_189416162_189417141
ENSMUSG00000026608.14_0	chr1	-	3688	18	FSM	ENSMUSG00000026608.14	ENSMUST00000085678.8	3706	18	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGTTAAAGCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	188740031	188703303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_188704881_188706262_188706402_188706483_188706669_188708807_188708905_188710693_188710850_188713421_188713593_188715206_188715324_188715403_188715492_188719712_188719829_188724759_188724951_188727938_188728030_188728596_188728738_188729158_188729240_188729473_188729533_188732449_188732524_188733539_188733586_188734101_188734156_188739726
ENSMUSG00000026610.14_0	chr1	+	2658	5	FSM	ENSMUSG00000026610.14	ENST00000463665.5	2676	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCAAACCAACCAACC	NA	NA	NA	NA	NA	NA	NA	NA	187775536	187944796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_187775947_187878509_187878621_187882375_187882538_187930772_187931043_187943091
ENSMUSG00000026610.14_5	chr1	+	5074	6	FSM	ENSMUSG00000026610.14	ENST00000673908.1	5087	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGCCGCTGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	187775537	187947075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_187775947_187798537_187798655_187878509_187878621_187882354_187882538_187930772_187931043_187943091
ENSMUSG00000026615.15_0	chr1	+	4889	32	FSM	ENSMUSG00000026615.15	ENSMUST00000046514.13	4906	32	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATCTATTTGGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	185095251	185160551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_185095441_185099727_185099813_185101773_185101874_185103085_185103243_185105114_185105255_185106314_185106410_185110971_185111099_185111741_185111935_185113996_185114169_185117073_185117308_185118442_185118528_185119255_185119316_185126559_185126671_185128226_185128364_185129256_185129465_185130590_185130704_185131418_185131537_185133505_185133866_185139157_185139392_185139687_185139951_185142381_185142434_185143354_185143565_185143899_185143973_185145351_185145432_185145645_185145748_185146526_185146683_185147950_185148149_185150408_185150583_185152323_185152485_185156507_185156587_185160048_185160114_185160193
ENSMUSG00000026617.17_0	chr1	+	2183	9	FSM	ENSMUSG00000026617.17	ENSMUST00000027916.13	2200	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGGTAATTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	185064354	185089966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_10	chr1	+	957	7	ISM	ENSMUSG00000026617.17	ENSMUST00000110965.2	1046	8	9043	5	9043	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCATCTAATACGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	185073419	185088973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_3	chr1	+	1221	10	FSM	ENSMUSG00000026617.17	ENSMUST00000210277.2	1226	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCATCTAATACGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	185064368	185088973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_185064461_185070302_185070430_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185082033_185082079_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026617.17_4	chr1	+	1032	8	FSM	ENSMUSG00000026617.17	ENSMUST00000110965.2	1046	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCATCTAATACGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	185064385	185088973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_185064461_185073419_185073525_185077511_185077620_185078871_185078921_185080940_185081033_185084378_185084577_185086153_185086260_185088674
ENSMUSG00000026618.12_0	chr1	-	5456	23	FSM	ENSMUSG00000026618.12	ENSMUST00000027921.11	5471	23	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATATTGTTTCTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	185061584	185016928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_185019389_185020236_185020382_185021549_185021741_185022682_185022829_185023515_185023623_185026940_185027073_185027751_185027878_185028607_185028711_185029669_185029779_185034904_185034999_185035495_185035599_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ENSMUSG00000026618.12_25	chr1	-	2407	13	FSM	ENSMUSG00000026618.12	ENSMUST00000110974.4	2431	13	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGACAAACCTTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	185061573	185044046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_185044725_185048090_185048252_185050003_185050156_185050760_185050852_185053033_185053204_185054596_185054713_185055017_185055109_185055189_185055300_185055382_185055433_185055863_185056013_185057699_185057860_185059816_185059940_185061217
ENSMUSG00000026620.12_0	chr1	-	4399	18	FSM	ENSMUSG00000026620.12	ENST00000611084.4	4418	18	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTCAGAACAGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	184731783	184628826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_184631076_184633005_184633051_184637599_184637855_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184660230_184660297_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ENSMUSG00000026620.12_1	chr1	-	4332	17	FSM	ENSMUSG00000026620.12	ENST00000677505.1	4349	17	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTCAGAACAGAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	184731785	184628826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_184631076_184633005_184633051_184637599_184637852_184639279_184639445_184640525_184640627_184644192_184644387_184644678_184644833_184646713_184646827_184648275_184648376_184651506_184651627_184651714_184651952_184653748_184653806_184658012_184658084_184661518_184661568_184675402_184675457_184676993_184677198_184731618
ENSMUSG00000026622.16_0	chr1	+	3207	8	FSM	ENSMUSG00000026622.16	ENSMUST00000027931.8	3227	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATCACTGTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	191553567	191565154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191553854_191554258_191554477_191554603_191554845_191557594_191557678_191558334_191558462_191559261_191559482_191561503_191561630_191563248
ENSMUSG00000026623.17_0	chr1	+	7223	8	FSM	ENSMUSG00000026623.17	ENSMUST00000110855.8	7233	8	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTGGGTGGCCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	191449950	191516362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191450318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ENSMUSG00000026623.17_13	chr1	+	1216	7	ISM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	230	24	230	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATATATAAAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	191451461	191510718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ENSMUSG00000026623.17_3	chr1	+	1298	8	FSM	ENSMUSG00000026623.17	ENST00000366996.1	1322	8	4	20	4	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	1617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TATATAAAAAGAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	191451235	191510722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191451318_191451465_191451731_191481651_191481771_191488043_191488140_191492085_191492360_191495656_191495784_191508434_191508542_191510494
ENSMUSG00000026626.12_0	chr1	-	3069	13	FSM	ENSMUSG00000026626.12	ENSMUST00000067976.9	3088	13	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTTGCTCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	191129220	191084172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191085307_191086070_191086173_191086727_191086856_191086938_191087059_191087219_191087271_191088530_191088585_191089083_191089193_191089988_191090049_191091121_191091253_191094445_191094539_191100837_191100940_191104666_191104864_191128432
ENSMUSG00000026627.8_0	chr1	+	2230	8	FSM	ENSMUSG00000026627.8	ENSMUST00000027940.6	2246	8	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAAATATTCCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	191058115	191083102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191058274_191060379_191060477_191070978_191071189_191072923_191073076_191077173_191077317_191078956_191079102_191080564_191080673_191081885
ENSMUSG00000026628.14_0	chr1	-	1974	4	FSM	ENSMUSG00000026628.14	ENSMUST00000027941.14	1984	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGTTAGTGTGGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	190915530	190902495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190903877_190904571_190904680_190909427_190909672_190915289
ENSMUSG00000026632.18_0	chr1	-	1224	10	FSM	ENSMUSG00000026632.18	ENSMUST00000110893.10	1242	10	6	12	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAAAAGGAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	190795123	190778034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUSG00000026632.18_10	chr1	-	641	8	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	1585	9	1585	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAAAGTCACCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	190793454	190778375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190778518_190781478_190781557_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421
ENSMUSG00000026632.18_11	chr1	-	658	7	ISM	ENSMUSG00000026632.18	ENST00000526641.5	745	9	2655	13	2655	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTTCAAAGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	190792384	190778379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190791023_190791109_190792309
ENSMUSG00000026632.18_12	chr1	-	694	8	ISM	ENSMUSG00000026632.18	ENST00000526641.5	745	9	1585	9	1585	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAAAGTCACCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	190793454	190778375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190791023_190791109_190792309_190792384_190793421
ENSMUSG00000026632.18_14	chr1	-	605	7	ISM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	2656	12	2656	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCTTCAAAGTCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	190792383	190778378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190778518_190781478_190781557_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309
ENSMUSG00000026632.18_37	chr1	-	279	3	ISM	ENSMUSG00000026632.18	ENST00000530441.5	363	5	2655	10	2655	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAATTCCTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	190792384	190787427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190787569_190788559_190788623_190792309
ENSMUSG00000026632.18_38	chr1	-	353	5	FSM	ENSMUSG00000026632.18	ENST00000530441.5	363	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAATTCCTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	190795039	190787427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190787569_190788559_190788623_190792309_190792384_190793421_190793455_190794997
ENSMUSG00000026632.18_39	chr1	-	311	4	ISM	ENSMUSG00000026632.18	ENST00000530441.5	363	5	1585	10	1585	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCAAATTCCTTAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	190793454	190787427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_190787569_190788559_190788623_190792309_190792384_190793421
ENSMUSG00000026632.18_8	chr1	-	736	9	FSM	ENSMUSG00000026632.18	ENST00000526641.5	745	9	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAAAGTCACCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	190795039	190778375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190778518_190781478_190781560_190785056_190785170_190787052_190787109_190787458_190787569_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUSG00000026632.18_9	chr1	-	683	9	FSM	ENSMUSG00000026632.18	ENST00000526997.5	692	9	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAAAGTCACCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	190795039	190778375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190778518_190781478_190781557_190787052_190787109_190787458_190787569_190788559_190788623_190791023_190791109_190792309_190792384_190793421_190793455_190794997
ENSMUSG00000026634.17_0	chr1	+	3559	10	FSM	ENSMUSG00000026634.17	ENSMUST00000027947.13	3562	10	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	190657310	190679158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_190657377_190658884_190658932_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_3	chr1	+	3492	9	ISM	ENSMUSG00000026634.17	ENSMUST00000027947.13	3562	10	1577	1	1577	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	190658885	190679158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_190658932_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_5	chr1	+	3706	9	FSM	ENSMUSG00000026634.17	ENSMUST00000066632.14	3714	9	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	190660695	190679158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_190660956_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026634.17_8	chr1	+	3662	9	FSM	ENSMUSG00000026634.17	ENSMUST00000110899.7	3673	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGTGGACAGAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	190660698	190679158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_190660915_190665063_190665390_190669640_190669898_190671283_190671354_190673070_190673493_190674317_190674445_190675026_190675085_190675973_190676138_190677136
ENSMUSG00000026637.15_0	chr1	-	2202	11	FSM	ENSMUSG00000026637.15	ENSMUST00000195815.3	2214	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACAAGGCCTGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	191776863	191729174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191729969_191731758_191731928_191733717_191733859_191738764_191738858_191741554_191741630_191742389_191742468_191743409_191743575_191746941_191747044_191751193_191751252_191754716_191754936_191776555
ENSMUSG00000026639.19_0	chr1	+	4833	27	FSM	ENSMUSG00000026639.19	ENSMUST00000194677.6	4867	27	21	13	21	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAATGATCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	192890053	193026173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192890186_192951751_192951871_192962530_192962584_192962678_192963230_192976660_192976745_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ENSMUSG00000026639.19_2	chr1	+	4023	23	FSM	ENSMUSG00000026639.19	ENSMUST00000016315.16	4056	23	20	13	20	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAAATGATCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	192984320	193026173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192984450_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ENSMUSG00000026639.19_5	chr1	+	3978	23	FSM	ENSMUSG00000026639.19	ENSMUST00000159955.2	4013	23	19	16	19	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTCAAGAAGAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	192984569	193026167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192984660_192985795_192985856_192986743_192986899_193002739_193002855_193003360_193003435_193006044_193006237_193007867_193007932_193008196_193008382_193010201_193010323_193010942_193011132_193012347_193012504_193013055_193013253_193013603_193013716_193014430_193014810_193016487_193016649_193016723_193016942_193017156_193017355_193017664_193017810_193021113_193021322_193021696_193021839_193022192_193022370_193023055_193023210_193025681
ENSMUSG00000026640.13_0	chr1	+	11012	32	FSM	ENSMUSG00000026640.13	ENSMUST00000027952.12	11040	32	12	16	12	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCTTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	194302144	194499161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_194302706_194325993_194327256_194331763_194331947_194394491_194394627_194428437_194428539_194431619_194431744_194433683_194433838_194434360_194434458_194436627_194436743_194444706_194444908_194446789_194446887_194449678_194449870_194462820_194462973_194468874_194468993_194471086_194471224_194472028_194472197_194472418_194472513_194476036_194476277_194476680_194476825_194477130_194477366_194479214_194479358_194479847_194480117_194481817_194481885_194482082_194482230_194482808_194482969_194483350_194483455_194487210_194487311_194488589_194488781_194489809_194489980_194492369_194492583_194493164_194493316_194494373
ENSMUSG00000026641.14_0	chr1	+	2153	10	FSM	ENSMUSG00000026641.14	ENSMUST00000161241.8	2167	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGAACCCCCTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	171238889	171246705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171239009_171242004_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244574_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026641.14_11	chr1	+	986	9	FSM	ENSMUSG00000026641.14	ENST00000368019.5	997	9	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCATGCCCCTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	171242010	171245747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171242098_171243072_171243123_171243282_171243399_171243702_171243805_171244377_171244490_171244809_171244898_171245040_171245100_171245208_171245433_171245599
ENSMUSG00000026643.17_0	chr2	+	4444	14	FSM	ENSMUSG00000026643.17	ENSMUST00000081932.13	4461	14	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTGTTTTGAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3285258	3329907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3308019_3308070_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026643.17_9	chr2	+	1661	13	FSM	ENSMUSG00000026643.17	ENSMUST00000091504.5	1676	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAATTGAAGTAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3285312	3327228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3285444_3305848_3305985_3306433_3306477_3310503_3310649_3313492_3313612_3313698_3313791_3313897_3314015_3315730_3315902_3317176_3317286_3323607_3323779_3325867_3326036_3326300_3326439_3327107
ENSMUSG00000026646.17_0	chr2	-	4303	6	FSM	ENSMUSG00000026646.17	ENSMUST00000027956.9	4327	6	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTAAAGATTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	3476055	3456862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_3459767_3460793_3460924_3463517_3463665_3465303_3465964_3473538_3473685_3475739
ENSMUSG00000026648.19_14	chr2	+	1843	12	ISM	ENSMUSG00000026648.19	ENST00000378246.6	1907	13	3911	5	3911	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAGTTAACAAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3430309	3454836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884_3454302_3454344
ENSMUSG00000026648.19_2	chr2	+	1902	13	FSM	ENSMUSG00000026648.19	ENST00000378246.6	1907	13	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAGTTAACAAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3426398	3454836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3426453_3430304_3430390_3434783_3434844_3438025_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884_3454302_3454344
ENSMUSG00000026648.19_21	chr2	+	1698	10	FSM	ENSMUSG00000026648.19	ENST00000378249.5	1710	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAGTTAACAAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3438030	3454836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3438128_3438712_3438786_3438988_3439130_3441794_3441897_3444690_3444828_3445237_3445293_3448110_3448200_3451315_3451411_3453884_3454302_3454344
ENSMUSG00000026649.15_0	chr1	+	1011	6	FSM	ENSMUSG00000026649.15	ENSMUST00000027959.11	1034	6	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTTTACGTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	170949252	170954536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170949391_170950614_170950763_170952602_170952666_170952838_170952920_170953602_170953780_170954132
ENSMUSG00000026650.16_0	chr2	-	568	3	FSM	ENSMUSG00000026650.16	ENSMUST00000115082.10	603	3	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTGAATTGTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	3420137	3410089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_3410361_3412881_3413049_3420007
ENSMUSG00000026655.16_0	chr2	+	3587	5	FSM	ENSMUSG00000026655.16	ENSMUST00000226435.2	3602	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGCAGCCATGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3571531	3783171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3572092_3649264_3649323_3773832_3774017_3779454_3779606_3780537
ENSMUSG00000026655.16_2	chr2	+	3138	4	FSM	ENSMUSG00000026655.16	ENSMUST00000027965.11	3156	4	10	8	-10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACGCAGCCATGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	3714504	3783171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3714674_3773832_3774017_3779454_3779606_3780537
ENSMUSG00000026655.16_3	chr2	+	639	4	FSM	ENSMUSG00000026655.16	ENST00000496330.5	652	4	7	6	7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGTGTGACCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	3750239	3780658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3750343_3773752_3774017_3779454_3779606_3780537
ENSMUSG00000026655.16_5	chr2	+	537	3	ISM	ENSMUSG00000026655.16	ENST00000496330.5	652	4	23519	6	-1231	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGTGTGTGACCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	3773751	3780658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_3774017_3779454_3779606_3780537
ENSMUSG00000026656.16_0	chr1	-	559	3	FSM	ENSMUSG00000026656.16	ENST00000236937.13	573	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTTATTATCCTAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	170795790	170793322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170793381_170794010_170794270_170795548
ENSMUSG00000026657.18_0	chr2	+	6732	24	FSM	ENSMUSG00000026657.18	ENSMUST00000075767.14	6761	24	17	12	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAACACCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4405802	4618842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4406405_4436009_4436076_4477931_4478027_4488850_4488944_4502799_4502885_4518599_4518657_4519807_4519831_4534602_4534687_4539356_4539423_4539983_4540042_4542049_4542137_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4612882_4615777
ENSMUSG00000026657.18_20	chr2	+	6198	23	NNC	ENSMUSG00000026657.18	novel	6208	23	NA	NA	2	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATCTGCTTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	4157684	4618743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_4157922_4436007_4436076_4477931_4478027_4488850_4488944_4502799_4502885_4518599_4518657_4519807_4519831_4534602_4534687_4539356_4539423_4539983_4540042_4542049_4542137_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4615777
ENSMUSG00000026657.18_3	chr2	+	6131	23	ISM	ENSMUSG00000026657.18	ENSMUST00000075767.14	6761	24	30223	12	30223	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAACACCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4436008	4618842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_4436076_4477931_4478027_4488850_4488944_4502799_4502885_4518599_4518657_4519807_4519831_4534602_4534687_4539356_4539423_4539983_4540042_4542049_4542137_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4612882_4615777
ENSMUSG00000026657.18_5	chr2	+	6517	25	NNC	ENSMUSG00000026657.18	novel	6538	25	NA	NA	12	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAAACACCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	4022566	4618842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_4022831_4023271_4023394_4436008_4436076_4477931_4478027_4488850_4488944_4502799_4502885_4518599_4518657_4519807_4519831_4534602_4534687_4539356_4539423_4539983_4540042_4542049_4542137_4565024_4565102_4570862_4571002_4577108_4577251_4591171_4591306_4595430_4595554_4599349_4599579_4602148_4602206_4605925_4606167_4606925_4607091_4608187_4609063_4610780_4610878_4612809_4612882_4615777
ENSMUSG00000026659.14_0	chr1	-	1358	6	FSM	ENSMUSG00000026659.14	ENSMUST00000027970.14	1374	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACCCAGGTCCTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	170713101	170701764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170702140_170707228_170707416_170707698_170707796_170708141_170708261_170708483_170708598_170712635
ENSMUSG00000026662.14_0	chr2	+	5297	9	FSM	ENSMUSG00000026662.14	ENSMUST00000027973.14	5319	9	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAGTTTAAACTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	4886383	4915355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_3	chr2	+	2354	8	FSM	ENSMUSG00000026662.14	ENST00000378614.8	2363	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGCTCTTGTATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	4886406	4912648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4886672_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4911391
ENSMUSG00000026662.14_5	chr2	+	2928	9	FSM	ENSMUSG00000026662.14	ENSMUST00000115019.2	2933	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTCAAAAGAGAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	4887055	4912943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4887387_4889142_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4910282_4910496_4911391
ENSMUSG00000026662.14_6	chr2	+	934	7	FSM	ENSMUSG00000026662.14	ENST00000426891.1	950	7	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCCTAATCCAGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	4889246	4911597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4889417_4893993_4894098_4896397_4896506_4897995_4898151_4901499_4901591_4904274_4904375_4911391
ENSMUSG00000026663.7_0	chr1	-	7235	16	FSM	ENSMUSG00000026663.7	ENSMUST00000027974.7	7246	16	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGTCTGTACAAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	170695329	170532242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680473_170680562_170682681_170682759_170695218
ENSMUSG00000026663.7_20	chr1	-	1647	13	FSM	ENSMUSG00000026663.7	ENST00000679833.1	1657	13	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTAGCTGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	170682746	170614888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465_170680562_170682681
ENSMUSG00000026663.7_21	chr1	-	1577	12	ISM	ENSMUSG00000026663.7	ENST00000679833.1	1657	13	2191	9	2191	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTTAGCTGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	170680556	170614888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_170615030_170616176_170616245_170621525_170621626_170622225_170622340_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465
ENSMUSG00000026663.7_3	chr1	-	2607	15	FSM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGGGGAAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	170682745	170536810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622396_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465_170680562_170682681
ENSMUSG00000026663.7_4	chr1	-	2538	14	ISM	ENSMUSG00000026663.7	ENST00000680688.1	2609	15	2191	0	2191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGGGGAAGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	170680556	170536810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_170537657_170574674_170574760_170614914_170615030_170616176_170616245_170621525_170621626_170622225_170622396_170627182_170627315_170642991_170643084_170646815_170647002_170662388_170662610_170668249_170668454_170669254_170669382_170676685_170676787_170680465
ENSMUSG00000026664.8_0	chr2	+	1421	9	FSM	ENSMUSG00000026664.8	ENSMUST00000027975.8	1438	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGTAGGCATATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	4923838	4943533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4923956_4927638_4927698_4930408_4930520_4932160_4932330_4933481_4933564_4935523_4935706_4940779_4940930_4942486_4942622_4943117
ENSMUSG00000026667.15_0	chr1	-	7837	8	FSM	ENSMUSG00000026667.15	ENSMUST00000027979.14	7864	8	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAAAAGAAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	170042952	170021001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170027583_170032683_170032773_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ENSMUSG00000026667.15_1	chr1	-	7743	7	FSM	ENSMUSG00000026667.15	ENSMUST00000123399.2	7775	7	19	13	19	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGAAAAGAAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	170042947	170021001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170027583_170034682_170034782_170034914_170034992_170036223_170036319_170038599_170038792_170039804_170040098_170042541
ENSMUSG00000026669.15_0	chr2	-	4850	20	FSM	ENSMUSG00000026669.15	ENSMUST00000102985.8	4867	20	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAATCCACTACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	5017149	4994535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5016705
ENSMUSG00000026669.15_1	chr2	-	3472	20	FSM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTGAGAGGCTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	5017589	4995543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499_5015587_5017515
ENSMUSG00000026669.15_2	chr2	-	3403	19	ISM	ENSMUSG00000026669.15	ENSMUST00000027980.8	3494	20	2019	1	1572	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCTGTGAAACGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	5015583	4995535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_4996288_4996905_4996949_4997688_4997835_4998553_4998668_4999380_4999494_5000531_5000677_5001914_5002144_5003344_5003454_5003540_5003652_5004490_5004592_5005670_5005868_5006074_5006192_5008818_5008987_5009756_5009923_5011154_5011390_5011877_5012013_5012138_5012244_5013290_5013624_5015499
ENSMUSG00000026670.16_0	chr1	-	2309	10	FSM	ENSMUSG00000026670.16	ENSMUST00000111350.10	2311	10	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAATGCATAAAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	170002526	169969508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169970142_169970965_169971033_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026670.16_2	chr1	-	2278	11	FSM	ENSMUSG00000026670.16	ENSMUST00000111351.10	2287	11	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	170002507	169969571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169970142_169970965_169971033_169975564_169975616_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026670.16_4	chr1	-	2276	11	FSM	ENSMUSG00000026670.16	ENSMUST00000027981.8	2283	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCTTGTTTCTACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	170002508	169969571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169970142_169970965_169971033_169975564_169975613_169976839_169977029_169977880_169978022_169978511_169978706_169984492_169984666_169986319_169986496_169988935_169989141_169994194_169994518_170002318
ENSMUSG00000026672.12_0	chr2	-	2597	14	FSM	ENSMUSG00000026672.12	ENSMUST00000114996.8	2614	14	9	8	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTCTGTGTGTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	5068847	5025460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5026293_5028877_5028961_5031924_5032056_5036070_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5051011_5057798_5058002_5059350_5059528_5068717
ENSMUSG00000026672.12_31	chr2	-	1180	9	FSM	ENSMUSG00000026672.12	ENST00000378764.6	1199	9	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAACTAACCAAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	5059507	5037961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_8	chr2	-	1356	10	FSM	ENSMUSG00000026672.12	ENST00000378752.7	1368	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGAGTCAGGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5059506	5036072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045085_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026672.12_9	chr2	-	1372	10	FSM	ENSMUSG00000026672.12	ENST00000378747.8	1382	10	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGAGTCAGGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	5059508	5036072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5036230_5037941_5038036_5038964_5039115_5039778_5039895_5041481_5041582_5044949_5045099_5047257_5047332_5050797_5050951_5057780_5058002_5059350
ENSMUSG00000026674.10_0	chr1	-	8572	18	FSM	ENSMUSG00000026674.10	ENSMUST00000194690.6	8590	18	13	5	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATACAGTCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	169938117	169799880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641_169832874_169834330_169834434_169863481_169863591_169916363_169916514_169937830
ENSMUSG00000026674.10_1	chr1	-	8268	17	FSM	ENSMUSG00000026674.10	ENSMUST00000170800.8	8289	17	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATACAGTCTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	169916496	169799880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169805559_169809545_169809696_169811940_169812176_169812445_169812635_169814585_169814714_169815977_169816202_169818001_169818213_169822153_169822285_169823120_169823184_169825499_169825744_169829397_169829582_169831732_169831839_169832223_169832372_169832641_169832874_169834330_169834434_169863481_169863591_169916363
ENSMUSG00000026675.13_1	chr1	-	4598	9	FSM	ENSMUSG00000026675.13	ENSMUST00000027989.13	4612	9	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGGTTTTAGACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	169796802	169777109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169780704_169783503_169783603_169786991_169787049_169787255_169787361_169788573_169788769_169791959_169792075_169793255_169793349_169794798_169795003_169796666
ENSMUSG00000026676.8_0	chr2	+	2651	3	FSM	ENSMUSG00000026676.8	ENSMUST00000027988.8	2670	3	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5142591	5235675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_5143119_5146041_5146217_5233726
ENSMUSG00000026678.11_0	chr1	+	4079	5	FSM	ENSMUSG00000026678.11	ENSMUST00000027997.9	4096	5	12	5	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAAATATGTATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	169483081	169523377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_169483191_169504395_169504507_169510323_169510386_169517984_169518152_169519747
ENSMUSG00000026679.4_0	chr2	-	785	5	FSM	ENSMUSG00000026679.4	ENSMUST00000027992.3	1199	5	196	218	9	-218	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCAACTGTTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21209980	21185759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_21185930_21193977_21194125_21199085_21199310_21201460_21201607_21209882
ENSMUSG00000026679.4_1	chr2	-	536	3	ISM	ENSMUSG00000026679.4	ENST00000615958.4	551	4	8	1806	8	-218	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCCAACTGTTGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	21199304	21185759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_21185930_21193977_21194125_21199085
ENSMUSG00000026683.15_0	chr1	-	2384	14	FSM	ENSMUSG00000026683.15	ENSMUST00000111368.8	2405	14	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATGAAATTCTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	169359020	169325510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169358890
ENSMUSG00000026683.15_10	chr1	-	2055	15	FSM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTACTACTGTTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	169358991	169325886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUSG00000026683.15_11	chr1	-	1962	14	ISM	ENSMUSG00000026683.15	ENSMUST00000028000.13	2068	15	2614	2	2597	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACTGTTATCCAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	169356383	169325881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_169326490_169332033_169332170_169333550_169333727_169334812_169334954_169337968_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304
ENSMUSG00000026683.15_24	chr1	-	1260	11	FSM	ENSMUSG00000026683.15	ENSMUST00000192248.2	1271	11	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGAATTCTTAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	169358978	169337694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169338107_169339735_169339799_169341013_169341111_169342480_169342555_169344129_169344228_169349939_169350002_169350423_169350501_169351472_169351548_169352880_169353019_169356304_169356381_169358890
ENSMUSG00000026687.15_0	chr1	+	2829	11	FSM	ENSMUSG00000026687.15	ENSMUST00000028004.11	2835	11	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTTTGCCGTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	167177565	167196101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_167177986_167180088_167180235_167181995_167182126_167183240_167183376_167184098_167184296_167184878_167185020_167188971_167189161_167189372_167189461_167192076_167192219_167193343_167193457_167194973
ENSMUSG00000026688.6_0	chr1	-	1002	5	ISM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	15424	6	15424	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTTCTTTCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	167205986	167199540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860
ENSMUSG00000026688.6_1	chr1	-	1087	6	FSM	ENSMUSG00000026688.6	ENSMUST00000028005.3	1097	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGCTTCTTTCTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	167221404	167199538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_167200212_167201361_167201435_167203020_167203079_167204829_167204904_167205860_167205985_167221319
ENSMUSG00000026694.20_0	chr1	-	4537	8	FSM	ENSMUSG00000026694.20	ENSMUST00000028017.16	4541	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTTTGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	162376116	162359695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162362120_162363410_162363543_162364687_162364901_162366400_162366569_162369826_162370023_162371754_162371955_162373336_162374097_162375672
ENSMUSG00000026696.16_0	chr1	+	1448	8	FSM	ENSMUSG00000026696.16	ENSMUST00000135241.8	1461	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGTAAGTGAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	162398166	162422929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_162398350_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ENSMUSG00000026696.16_7	chr1	+	1403	8	FSM	ENSMUSG00000026696.16	ENSMUST00000155003.2	1428	8	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGTAAGTGAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	162398814	162422929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_162398953_162401866_162401986_162405440_162405488_162409387_162409439_162415764_162415866_162417033_162417114_162420194_162420247_162422114
ENSMUSG00000026698.9_0	chr1	+	3278	2	FSM	ENSMUSG00000026698.9	ENSMUST00000111594.3	3290	2	7	5	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTGTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	161796761	161800999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_161796849_161797808
ENSMUSG00000026698.9_1	chr1	+	2186	2	FSM	ENSMUSG00000026698.9	ENSMUST00000028021.7	2196	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAGATGTGACTACATA	NA	NA	NA	NA	NA	NA	NA	NA	161796762	161799895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_161796849_161797795
ENSMUSG00000026698.9_2	chr1	+	3185	1	FSM	ENSMUSG00000026698.9	ENSMUST00000193784.2	4207	1	1010	12	1010	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGTATTGTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	161797806	161800991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_161797800_161801000
ENSMUSG00000026701.16_0	chr1	-	2372	5	FSM	ENSMUSG00000026701.16	ENSMUST00000071718.12	2387	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGCAAATGTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	161078779	161067686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161069420_161071144_161071292_161071765_161071913_161074826_161074984_161078591
ENSMUSG00000026705.17_0	chr1	-	4042	12	FSM	ENSMUSG00000026705.17	ENSMUST00000111611.8	4072	12	20	10	20	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTAAAGTTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	160959061	160915954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160918082_160921250_160921358_160923098_160923308_160925832_160925967_160926711_160926856_160929020_160929205_160930548_160930665_160932970_160933066_160934276_160934436_160936791_160937366_160957958_160958023_160958932
ENSMUSG00000026707.16_0	chr2	-	3131	12	FSM	ENSMUSG00000026707.16	ENSMUST00000195749.6	3149	12	7	11	-4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACTGAATTAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	15059688	14999952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732_15054124_15059475
ENSMUSG00000026707.16_1	chr2	-	2883	11	FSM	ENSMUSG00000026707.16	ENSMUST00000028034.15	2897	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAATTAATTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	15054084	14999948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUSG00000026707.16_2	chr2	-	3035	12	FSM	ENSMUSG00000026707.16	ENSMUST00000076435.9	3042	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAATTAATTTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	15059683	14999948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_15001358_15002977_15003104_15014220_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732_15054029_15059475
ENSMUSG00000026707.16_20	chr2	-	2385	4	FSM	ENSMUSG00000026707.16	ENSMUST00000114713.2	2420	4	29	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACAACAGCTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	15054094	15041251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_15043039_15047037_15047118_15051958_15052115_15053732
ENSMUSG00000026707.16_6	chr2	-	1501	11	FSM	ENSMUSG00000026707.16	ENST00000377304.7	1512	11	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACAGGATGATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	15053798	15001041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_15001358_15002977_15003104_15014223_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958_15052115_15053732
ENSMUSG00000026707.16_7	chr2	-	1427	10	ISM	ENSMUSG00000026707.16	ENST00000377304.7	1512	11	1694	9	1694	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACAGGATGATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	15052106	15001041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_15001358_15002977_15003104_15014223_15014370_15017950_15018096_15034839_15034960_15041085_15041168_15042884_15043039_15044543_15044654_15047037_15047118_15051958
ENSMUSG00000026708.17_0	chr1	+	4863	4	FSM	ENSMUSG00000026708.17	ENSMUST00000028035.14	4883	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCATAATGCTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	160898296	160914284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477
ENSMUSG00000026708.17_1	chr1	+	1901	5	FSM	ENSMUSG00000026708.17	ENSMUST00000111620.10	1910	5	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAAGTTATTTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	160898343	160913906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160898927_160902326_160902501_160905798_160906051_160910477_160911021_160913557
ENSMUSG00000026709.11_0	chr1	-	3609	17	FSM	ENSMUSG00000026709.11	ENSMUST00000035430.4	3619	17	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCTGCATGTCCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	160898218	160868170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026709.11_12	chr1	-	1957	16	FSM	ENSMUSG00000026709.11	ENST00000648807.1	1974	16	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTTAGAACCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	160897785	160869236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160877507_160877571_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026709.11_13	chr1	-	2049	16	FSM	ENSMUSG00000026709.11	ENST00000647645.1	2064	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTTAGAACCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	160897787	160869236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160869501_160871182_160871259_160872528_160872640_160872827_160873047_160874346_160874500_160878900_160879009_160881510_160881691_160884030_160884101_160885016_160885124_160887614_160887662_160888305_160888430_160890351_160890448_160890816_160890919_160892794_160892862_160896649_160896750_160897562
ENSMUSG00000026712.4_0	chr2	+	5361	30	FSM	ENSMUSG00000026712.4	ENSMUST00000028045.4	5374	30	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAATACTGTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	14234208	14336861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_14234385_14242936_14243339_14248928_14249103_14253617_14253783_14261814_14261929_14265999_14266147_14271160_14271347_14274949_14275108_14276074_14276186_14281097_14281214_14284646_14284796_14293797_14293998_14297329_14297458_14298256_14298345_14299610_14299756_14308921_14308964_14310126_14310291_14311274_14311343_14312697_14312799_14313489_14313633_14314778_14314894_14320044_14320212_14321652_14321756_14323911_14324145_14326583_14326750_14330038_14330189_14332597_14332712_14333230_14333396_14334693_14334736_14335732
ENSMUSG00000026718.18_0	chr2	+	4973	14	FSM	ENSMUSG00000026718.18	ENSMUST00000102960.11	5000	14	15	12	15	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAAGGATCTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	14078923	14154433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_14079148_14107211_14107297_14120627_14120704_14120788_14120885_14122199_14122347_14133356_14133448_14133789_14133983_14135834_14135930_14139163_14139253_14142297_14142386_14142946_14143002_14143766_14143921_14146512_14146689_14151029
ENSMUSG00000026721.17_0	chr1	-	1653	10	FSM	ENSMUSG00000026721.17	ENST00000367687.5	1673	10	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGAACAGACCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	160269528	160051255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160085012_160085106_160169605_160169735_160219751_160219794_160269392
ENSMUSG00000026721.17_11	chr1	-	1395	7	FSM	ENSMUSG00000026721.17	ENST00000367688.3	1414	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTGACAGGTTTCACTC	NA	NA	NA	NA	NA	NA	NA	NA	160079017	160051310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160051939_160054054_160054253_160059365_160059438_160064195_160064280_160066100_160066206_160075028_160075140_160078820
ENSMUSG00000026721.17_20	chr1	-	567	3	FSM	ENSMUSG00000026721.17	ENST00000486220.5	592	3	15	10	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGCACAGTAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	160134939	160084556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160084837_160085012_160085106_160134745
ENSMUSG00000026721.17_21	chr1	-	2874	21	FSM	ENSMUSG00000026721.17	ENST00000251507.8	2886	21	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAGCACAGTAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	160620428	160084556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160084837_160085012_160085106_160169605_160169735_160219751_160219794_160269392_160269537_160270760_160270887_160281320_160281396_160299567_160299682_160454784_160454936_160472877_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568321_160568493_160620300
ENSMUSG00000026721.17_29	chr1	-	1711	12	FSM	ENSMUSG00000026721.17	ENST00000357444.10	1728	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGGTAAGAATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	160620536	160472883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160472972_160509610_160509753_160528281_160528449_160529927_160530031_160537716_160537784_160549702_160549814_160551601_160551760_160561098_160561274_160563117_160563329_160566465_160566659_160568432_160568493_160620300
ENSMUSG00000026723.11_0	chr2	-	3766	11	FSM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCTGAAATCACCATTG	NA	NA	NA	NA	NA	NA	NA	NA	13549468	13513835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194_13538305_13549379
ENSMUSG00000026723.11_1	chr2	-	3681	10	ISM	ENSMUSG00000026723.11	ENSMUST00000124488.7	3788	11	11173	9	11173	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTGAAATCACCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13538306	13513833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_13516502_13520825_13520956_13521469_13521528_13524566_13524911_13526073_13526158_13526888_13526959_13527634_13527701_13528236_13528309_13530428_13530506_13538194
ENSMUSG00000026725.18_0	chr1	-	4968	19	FSM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAAAAGCCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	159981104	159912609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016_159975459_159981051
ENSMUSG00000026725.18_1	chr1	-	4907	18	ISM	ENSMUSG00000026725.18	ENST00000239462.9	4979	19	5654	11	3	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAAAAGCCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	159975450	159912609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159945908_159946173_159950224_159950489_159958253_159958518_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026725.18_12	chr1	-	3338	16	FSM	ENSMUSG00000026725.18	ENST00000622870.4	3363	16	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGAAGCGCTCCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	159975439	159913639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_159913739_159915962_159916127_159924763_159924932_159925782_159925880_159932396_159932549_159932967_159933101_159934580_159934712_159937815_159938080_159942060_159942325_159943639_159943904_159948067_159948332_159966818_159966909_159968156_159968343_159972552_159972817_159973581_159973957_159975016
ENSMUSG00000026726.11_0	chr2	-	11248	67	FSM	ENSMUSG00000026726.11	ENSMUST00000091436.7	11262	67	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCATACAGTTCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	13496617	13281155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13281647_13283172_13283409_13284886_13285053_13287715_13287898_13288791_13288940_13291791_13291998_13292355_13292519_13299008_13299218_13311069_13311288_13313332_13313463_13315325_13315527_13318792_13318943_13319463_13319621_13322967_13323156_13324600_13324827_13325979_13326102_13327761_13327912_13329967_13330175_13331466_13331639_13336291_13336474_13337123_13337265_13338156_13338367_13339585_13339765_13340898_13341074_13344633_13344818_13344952_13345144_13347245_13347393_13352333_13352532_13352810_13353004_13354661_13354847_13355682_13355889_13360378_13360512_13361394_13361524_13362929_13363041_13365067_13365182_13367013_13367174_13386568_13386739_13388680_13388856_13393649_13393832_13408776_13408928_13429482_13429671_13431762_13431920_13432647_13432830_13433418_13433580_13435625_13435816_13445225_13445357_13449065_13449283_13449731_13449898_13450778_13450958_13451756_13451902_13460159_13460351_13461415_13461579_13463756_13463939_13470625_13470861_13472420_13472534_13473524_13473712_13474572_13474695_13478208_13478311_13480847_13480980_13482870_13483034_13483880_13484008_13490857_13490962_13491565_13491668_13494129_13494169_13494708_13494805_13495991_13496122_13496511
ENSMUSG00000026726.11_3	chr2	-	1629	9	FSM	ENSMUSG00000026726.11	ENST00000457461.1	1652	9	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGGTTAGTTCAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	13345127	13329972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13330175_13331461_13331639_13336291_13336474_13337123_13337265_13338152_13338367_13339585_13339765_13340898_13341074_13344633_13344818_13344952
ENSMUSG00000026727.11_0	chr2	-	1634	8	FSM	ENSMUSG00000026727.11	ENST00000345264.10	1640	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATTATCTCACCAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	13275831	13081514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275723
ENSMUSG00000026727.11_18	chr2	-	289	3	FSM	ENSMUSG00000026727.11	ENST00000661630.1	289	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCAGAGCTTGGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	13229216	13221594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13221696_13221995_13222083_13229115
ENSMUSG00000026727.11_8	chr2	-	1530	9	FSM	ENSMUSG00000026727.11	ENSMUST00000028059.9	1546	9	11	5	-10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTATATCACACGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	13276215	13081827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13082419_13174808_13174942_13221580_13221696_13221999_13222083_13223819_13223939_13229115_13229237_13246555_13246607_13275721_13275834_13276010
ENSMUSG00000026728.10_0	chr2	+	2175	9	FSM	ENSMUSG00000026728.10	ENSMUST00000028062.8	2193	9	10	8	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	64345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGTTTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13578772	13587629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_13579806_13580351_13580413_13583223_13583320_13583399_13583562_13584231_13584358_13584828_13585050_13585450_13585495_13586423_13586510_13587283
ENSMUSG00000026730.13_0	chr2	+	3556	5	FSM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	13	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGAGTCTAAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	12928915	13008264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999702_13005667
ENSMUSG00000026730.13_1	chr2	+	1628	5	FSM	ENSMUSG00000026730.13	ENSMUST00000028063.7	1652	5	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTACCTATGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12928927	13006418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_12929010_12982970_12983429_12985103_12985370_12999560_12999632_13005667
ENSMUSG00000026730.13_3	chr2	+	3458	4	ISM	ENSMUSG00000026730.13	ENSMUST00000134794.8	3571	5	54066	8	54058	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTCAAGAGAGTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	12982968	13008258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_12983429_12985103_12985370_12999560_12999702_13005667
ENSMUSG00000026737.13_0	chr2	-	3468	10	FSM	ENSMUSG00000026737.13	ENSMUST00000006912.12	3477	10	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGGCTTCTCTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	19002929	18847066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_18849272_18850685_18850790_18852244_18852489_18857623_18857738_18870922_18870962_18877094_18877242_18893862_18894016_18911039_18911137_18912865_18912964_19002662
ENSMUSG00000026739.14_0	chr2	+	3574	10	FSM	ENSMUSG00000026739.14	ENSMUST00000028071.13	3594	10	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAAGATGCATCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	18681836	18691428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_18682281_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ENSMUSG00000026739.14_1	chr2	+	2728	10	FSM	ENSMUSG00000026739.14	ENSMUST00000051929.13	2747	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATTTAGAAAATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	18685193	18690933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_18685287_18686603_18686735_18687033_18687131_18687649_18687706_18687791_18687843_18687985_18688095_18688179_18688220_18688475_18688575_18688796_18688878_18688962
ENSMUSG00000026740.13_0	chr2	-	5059	13	FSM	ENSMUSG00000026740.13	ENSMUST00000091418.12	5070	13	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAACTATCCTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	18397621	18211153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_18214232_18222055_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ENSMUSG00000026740.13_2	chr2	-	5480	12	FSM	ENSMUSG00000026740.13	ENSMUST00000166495.8	5497	12	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAAAACTCTGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	18397633	18218568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_18222137_18224261_18224711_18227523_18227573_18236514_18236635_18289433_18289598_18298764_18298856_18311783_18311878_18312725_18312824_18313594_18313761_18321168_18321216_18321709_18321812_18397101
ENSMUSG00000026743.17_6	chr2	+	253	3	FSM	ENSMUSG00000026743.17	ENST00000652497.1	259	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGTAAGGACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	18069630	18076009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_18069650_18069845_18070006_18075935
ENSMUSG00000026743.17_8	chr2	+	219	2	ISM	ENSMUSG00000026743.17	ENST00000652497.1	259	3	230	6	230	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGGTAAGGACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	18069860	18076009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_18070006_18075935
ENSMUSG00000026748.14_0	chr2	+	6931	14	FSM	ENSMUSG00000026748.14	ENSMUST00000028081.13	6947	14	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTACATTGATTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	16361122	16760642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_16362049_16516832_16517045_16552927_16553075_16570146_16570217_16643397_16643521_16654919_16655039_16665584_16665685_16674304_16674401_16674633_16674716_16708127_16708195_16716892_16717041_16718480_16718520_16734063_16734225_16756001
ENSMUSG00000026749.12_0	chr2	+	10326	10	FSM	ENSMUSG00000026749.12	ENSMUST00000054234.10	10338	10	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	38401666	38484618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38401806_38440564_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291
ENSMUSG00000026749.12_8	chr2	+	2008	10	FSM	ENSMUSG00000026749.12	ENST00000540326.5	2016	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGTGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	38440574	38476614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38440684_38447827_38447969_38448864_38448928_38450892_38451004_38458858_38458968_38459639_38459748_38467250_38467346_38472394_38472509_38475291_38476210_38476374
ENSMUSG00000026750.7_0	chr2	-	1131	8	FSM	ENSMUSG00000026750.7	ENSMUST00000028083.6	1160	8	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	1833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAGACAAAAAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	38534089	38478066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38478301_38480708_38480861_38503443_38503503_38523862_38523979_38530084_38530226_38532189_38532288_38533369_38533464_38533852
ENSMUSG00000026753.6_0	chr2	-	4093	7	FSM	ENSMUSG00000026753.6	ENSMUST00000028087.6	4115	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAATTTTATCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	39116449	39084373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_39087602_39089674_39089885_39090053_39090134_39094844_39094987_39096663_39096730_39100969_39101066_39116178
ENSMUSG00000026754.17_0	chr2	-	4846	23	FSM	ENSMUSG00000026754.17	ENSMUST00000039165.15	4869	23	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATGATCCATGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38955539	38906175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38942967_38943043_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ENSMUSG00000026754.17_5	chr2	-	4628	22	FSM	ENSMUSG00000026754.17	ENSMUST00000112850.9	4635	22	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCACTCAGCTTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	38955500	38906279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38908502_38909001_38909089_38909494_38909666_38910082_38910143_38912712_38912857_38913151_38913286_38913384_38913488_38914220_38914311_38923168_38923265_38924072_38924223_38925236_38925333_38929051_38929148_38931238_38931365_38937034_38937147_38937608_38937779_38938321_38938451_38940170_38940204_38942015_38942114_38946071_38946163_38953253_38953517_38954686_38954736_38955392
ENSMUSG00000026755.15_0	chr2	+	1327	4	FSM	ENSMUSG00000026755.15	ENSMUST00000112862.7	1339	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAGGCTTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38898094	38905884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38898357_38903126_38903200_38903734_38903912_38905069
ENSMUSG00000026755.15_1	chr2	+	1325	4	NNC	ENSMUSG00000026755.15	novel	1339	4	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATTGAGGCTTCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38898095	38905884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_38898358_38903128_38903200_38903734_38903912_38905069
ENSMUSG00000026761.13_0	chr2	-	4043	14	FSM	ENSMUSG00000026761.13	ENSMUST00000028098.11	4066	14	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAACTGGAAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	48839280	48792850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839128
ENSMUSG00000026761.13_8	chr2	-	1445	14	FSM	ENSMUSG00000026761.13	ENST00000264169.6	1458	14	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTAAGTACATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48840096	48795423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_48795612_48799277_48799346_48799430_48799527_48800197_48800307_48802573_48802661_48807176_48807351_48817107_48817260_48819692_48819742_48823091_48823178_48823561_48823635_48826783_48826875_48827463_48827541_48830344_48830413_48839969
ENSMUSG00000026764.16_0	chr2	+	6829	26	FSM	ENSMUSG00000026764.16	ENSMUST00000028102.14	6856	26	23	4	23	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGACTGGTCTGGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	49509332	49664786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_49509800_49561763_49561855_49570176_49570251_49578664_49578770_49583705_49583755_49584011_49584068_49584779_49584868_49587991_49588117_49590512_49590618_49590968_49591118_49600731_49600881_49612988_49613162_49617902_49617972_49620128_49620336_49622715_49622863_49625444_49625634_49629094_49629213_49631344_49631422_49631950_49632061_49634376_49634479_49634697_49634759_49639310_49639383_49642260_49642366_49647350_49647568_49648821_49648935_49661175
ENSMUSG00000026765.13_0	chr2	+	1048	5	FSM	ENSMUSG00000026765.13	ENST00000409876.5	1049	5	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCATTACCGTAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	49756674	49838033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_49756739_49832456_49832609_49833533_49833633_49836091_49836223_49837431
ENSMUSG00000026765.13_3	chr2	+	977	4	ISM	ENSMUSG00000026765.13	ENST00000409876.5	1049	5	75784	6	75784	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTGCCCATTACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	49832457	49838027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_49832609_49833533_49833633_49836091_49836223_49837431
ENSMUSG00000026766.17_0	chr2	-	1335	8	FSM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGCTTGTGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	50186727	50169897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263_50186322_50186654
ENSMUSG00000026766.17_1	chr2	-	1261	7	ISM	ENSMUSG00000026766.17	ENSMUST00000102769.11	1342	8	409	5	409	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGGCTTGTGTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	50186320	50169897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_50170415_50171114_50171202_50177806_50177938_50178938_50179045_50181296_50181515_50182820_50182966_50186263
ENSMUSG00000026766.17_4	chr2	-	1228	6	FSM	ENSMUSG00000026766.17	ENST00000422782.2	1246	6	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGGGAAAACTTTAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	50182957	50169947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_50170415_50171114_50171229_50177751_50177938_50178938_50179045_50181296_50181515_50182820
ENSMUSG00000026767.13_0	chr2	-	2329	15	FSM	ENSMUSG00000026767.13	ENSMUST00000028105.13	2344	15	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACCCTTGCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	12424273	12352080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_12353015_12355739_12355812_12360087_12360176_12361715_12361789_12369257_12369331_12386913_12386995_12391419_12391491_12400989_12401070_12402303_12402378_12404833_12404949_12405835_12405888_12408808_12408980_12410670_12410732_12414811_12414892_12423969
ENSMUSG00000026771.15_0	chr2	-	6575	11	FSM	ENSMUSG00000026771.15	ENSMUST00000132484.7	6595	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGAATTAATTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	23462104	23396239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_23401473_23405016_23405071_23405159_23405303_23407840_23407964_23427339_23427396_23427472_23427651_23433208_23433337_23434757_23434910_23435164_23435287_23435455_23435592_23461854
ENSMUSG00000026773.20_0	chr2	-	4783	15	FSM	ENSMUSG00000026773.20	ENSMUST00000192949.6	4801	15	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAAATTAATAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	11558876	11476249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_11479355_11485008_11485183_11486681_11486747_11486864_11486928_11487255_11487386_11488739_11488845_11489015_11489163_11489465_11489674_11491029_11491155_11493536_11493594_11494481_11494557_11495100_11495168_11497370_11497468_11498713_11498840_11558637
ENSMUSG00000026775.10_0	chr2	+	4690	19	FSM	ENSMUSG00000026775.10	ENSMUST00000028117.4	4707	19	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTATCACATTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	23046389	23089264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_23046744_23050203_23050336_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026775.10_16	chr2	+	2121	18	FSM	ENSMUSG00000026775.10	ENST00000375972.7	2139	18	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACATGCGAAAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	23050210	23086929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_23050463_23052512_23052676_23054510_23054610_23058296_23058407_23062967_23063119_23065180_23065265_23071037_23071121_23073224_23073316_23076189_23076343_23076877_23077011_23077791_23077855_23081024_23081138_23082418_23082575_23083099_23083252_23084528_23084656_23084746_23084821_23085333_23085421_23086899
ENSMUSG00000026779.7_1	chr2	-	5562	12	FSM	ENSMUSG00000026779.7	ENSMUST00000028119.7	5590	12	6	22	6	-22	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23046030	23005639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_23008605_23010468_23010571_23010904_23011019_23021691_23021831_23022636_23023744_23026882_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026779.7_4	chr2	-	2744	11	FSM	ENSMUSG00000026779.7	ENST00000342386.10	2765	11	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTATCAATAAACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23045877	23008185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_23008605_23010468_23010571_23021691_23021831_23022636_23023728_23026871_23027056_23029919_23030068_23030510_23030618_23035375_23035465_23036053_23036194_23040999_23041138_23045690
ENSMUSG00000026781.18_14	chr2	+	2540	10	FSM	ENSMUSG00000026781.18	ENST00000677311.1	2555	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTCACAAGGTATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	22959282	23003437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989802_23002488
ENSMUSG00000026781.18_30	chr2	+	1577	12	FSM	ENSMUSG00000026781.18	ENST00000375888.5	1596	12	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAGGAGAAGGTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	22959443	23000762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22970679_22970713_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_38	chr2	+	1522	11	FSM	ENSMUSG00000026781.18	ENST00000676997.1	1541	11	11	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTAAGACTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22959472	23000769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984261_22984530_22989576_22989777_23000256_23000299_23000665
ENSMUSG00000026781.18_6	chr2	+	3602	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114529.10	3630	13	15	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGAACCTCATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	22959094	23004414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989573_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUSG00000026781.18_9	chr2	+	3697	13	FSM	ENSMUSG00000026781.18	ENSMUST00000114526.9	3725	13	14	14	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAGAAATGAAATGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	22959093	23004511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22959297_22959462_22959632_22965501_22965623_22968155_22968229_22970350_22970466_22977496_22977632_22979602_22979801_22980487_22980595_22984300_22984530_22989576_22989777_23000256_23000299_23000665_23000776_23002516
ENSMUSG00000026782.16_0	chr1	+	5743	9	FSM	ENSMUSG00000026782.16	ENSMUST00000052332.15	5768	9	15	10	15	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGTATATTGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	60448792	60520307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60483143_60483242_60486418_60486566_60487236_60487362_60492762_60492922_60509824_60509999_60515898
ENSMUSG00000026782.16_2	chr1	+	4101	11	FSM	ENSMUSG00000026782.16	ENSMUST00000189980.7	4115	11	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	60448892	60518663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60449079_60473401_60473570_60476214_60476392_60478100_60478119_60483143_60483242_60486418_60486566_60487236_60487362_60489328_60489413_60492762_60492922_60509824_60509999_60515898
ENSMUSG00000026784.15_0	chr2	+	1621	11	FSM	ENSMUSG00000026784.15	ENSMUST00000053729.14	1642	11	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGTGGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	22785545	22830269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426_22805537_22819551_22819633_22819755_22819870_22825570_22825652_22829834
ENSMUSG00000026784.15_6	chr2	+	1535	7	FSM	ENSMUSG00000026784.15	ENSMUST00000152170.8	1538	7	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTCTGGTCCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	22785608	22806224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22785775_22791292_22791358_22791764_22791886_22796806_22796938_22802611_22802754_22805213_22805326_22805426
ENSMUSG00000026785.15_0	chr2	+	3089	22	FSM	ENSMUSG00000026785.15	ENSMUST00000045246.8	3113	22	18	6	18	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGCCAGGGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29968613	29981025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29968803_29969545_29969775_29969937_29970084_29970586_29970699_29970767_29970896_29971064_29971249_29972827_29972975_29973052_29973163_29973250_29973395_29974702_29974779_29974861_29975025_29975194_29975292_29975371_29975440_29976448_29976513_29976643_29976736_29977036_29977214_29978531_29978595_29978707_29978785_29979850_29979994_29980079_29980188_29980342_29980424_29980534
ENSMUSG00000026786.15_0	chr2	+	2758	14	FSM	ENSMUSG00000026786.15	ENSMUST00000014290.15	2773	14	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGTATCTCTAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	22664111	22765656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_22664534_22706964_22707037_22709616_22709705_22713306_22713609_22716861_22716940_22724267_22724428_22725929_22726052_22739548_22739636_22743078_22743223_22748234_22748346_22756904_22757004_22757646_22757762_22761460_22761574_22764811
ENSMUSG00000026788.14_0	chr2	-	4906	2	FSM	ENSMUSG00000026788.14	ENSMUST00000095035.3	4925	2	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33352351	33340303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33345136_33352277
ENSMUSG00000026788.14_1	chr2	-	4976	3	FSM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	17	5	-10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33358527	33340303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33345136_33354925_33354987_33358444
ENSMUSG00000026788.14_2	chr2	-	4895	2	ISM	ENSMUSG00000026788.14	ENSMUST00000028125.12	4998	3	3556	5	-2623	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTGTGTTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33354988	33340303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_33345136_33354925
ENSMUSG00000026788.14_4	chr2	-	1815	4	FSM	ENSMUSG00000026788.14	ENSMUST00000113156.2	1828	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGTATGTTCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	33358509	33343538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33345136_33352277_33352370_33354925_33354987_33358444
ENSMUSG00000026790.20_1	chr2	+	3813	21	FSM	ENSMUSG00000026790.20	ENSMUST00000113756.8	3826	21	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTATGTCAGACTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	29779813	29821751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026790.20_13	chr2	+	2290	17	FSM	ENSMUSG00000026790.20	ENSMUST00000113755.8	2305	17	12	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	29779841	29812548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29779934_29782197_29782289_29783012_29783167_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026790.20_15	chr2	+	2793	21	FSM	ENSMUSG00000026790.20	ENST00000604420.5	2807	21	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCACCTGTCCAGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29779837	29820672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29779934_29780777_29781015_29782197_29782289_29783455_29783582_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224_29812384_29813550_29813652_29815951_29816115_29816715_29816842_29820481
ENSMUSG00000026790.20_33	chr2	+	2122	16	FSM	ENSMUSG00000026790.20	ENST00000546203.5	2134	16	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGCGTGTTGCACAA	NA	NA	NA	NA	NA	NA	NA	NA	29780088	29812548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29780224_29782197_29782289_29783455_29783525_29791088_29791260_29792192_29792354_29793332_29793463_29793987_29794120_29802580_29802653_29804242_29804315_29804405_29804523_29804745_29804932_29805219_29805330_29807621_29807758_29810786_29810898_29811015_29811121_29812224
ENSMUSG00000026791.15_0	chr2	-	2094	10	FSM	ENSMUSG00000026791.15	ENSMUST00000028129.13	2108	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTTCAACTTCAGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	32872085	32863006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32863745_32864849_32864996_32865325_32865497_32865931_32866041_32866148_32866293_32866872_32867073_32870013_32870114_32871372_32871580_32871732_32871896_32871969
ENSMUSG00000026792.17_10	chr2	-	2026	22	ISM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	1376	6	1376	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32848227	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169
ENSMUSG00000026792.17_11	chr2	-	2132	23	FSM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32849599	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32848169_32848227_32849528
ENSMUSG00000026792.17_20	chr2	-	2061	22	ISM	ENSMUSG00000026792.17	ENST00000675213.1	2142	23	1377	6	1377	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32848226	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32848169
ENSMUSG00000026792.17_26	chr2	-	2491	24	FSM	ENSMUSG00000026792.17	ENST00000675883.1	2511	24	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32851424	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055
ENSMUSG00000026792.17_7	chr2	-	2098	23	FSM	ENSMUSG00000026792.17	ENST00000373324.8	2106	23	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32849601	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32822102_32822202_32823826_32823923_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528
ENSMUSG00000026792.17_9	chr2	-	2476	24	FSM	ENSMUSG00000026792.17	ENST00000675141.1	2493	24	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGAAGGCACAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	32851427	32816793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32816914_32817996_32818143_32818663_32818746_32819585_32819718_32823826_32823923_32825179_32825261_32826447_32826523_32828808_32828897_32830252_32830353_32831814_32831886_32834716_32834762_32835453_32835594_32835862_32835986_32836103_32836134_32837802_32837934_32841104_32841196_32843375_32843498_32844213_32844299_32845192_32845262_32846486_32846565_32847260_32847306_32848169_32848227_32849528_32849626_32851055
ENSMUSG00000026796.17_0	chr2	+	3694	14	FSM	ENSMUSG00000026796.17	ENSMUST00000028135.15	3714	14	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTCATTTCCTCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	32766137	32815258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32766417_32795780_32795912_32799860_32799990_32801352_32801459_32802431_32802600_32809004_32809121_32809507_32809613_32809714_32809878_32810964_32811153_32812080_32812237_32812569_32812687_32812867_32812976_32813058_32813171_32813442
ENSMUSG00000026797.17_0	chr2	-	3881	19	FSM	ENSMUSG00000026797.17	ENSMUST00000050000.16	3892	19	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGAAGAGCTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	32737247	32677614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32679650_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ENSMUSG00000026797.17_4	chr2	-	3604	20	FSM	ENSMUSG00000026797.17	ENSMUST00000077458.7	3616	20	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGGTGCCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	32737205	32677975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32679650_32684599_32684726_32686027_32686183_32688116_32688203_32690591_32690694_32691831_32691942_32692765_32692905_32696080_32696162_32696732_32696799_32698013_32698075_32699112_32699221_32701116_32701248_32702032_32702118_32704890_32705040_32707297_32707402_32708438_32708518_32709845_32709923_32711846_32711929_32713547_32713598_32737066
ENSMUSG00000026798.11_0	chr2	+	1980	7	FSM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAAAAACTAAAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	29678277	29687751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29678370_29678448_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUSG00000026798.11_3	chr2	+	1894	6	ISM	ENSMUSG00000026798.11	ENSMUST00000028137.10	1991	7	176	0	176	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAAATGAAGCCGG	NA	NA	NA	NA	NA	NA	NA	NA	29678446	29687755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_29678581_29679914_29680012_29680468_29680572_29685392_29685523_29685947_29686042_29686419
ENSMUSG00000026799.16_0	chr2	+	1237	8	FSM	ENSMUSG00000026799.16	ENSMUST00000028139.11	1254	8	13	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGCTCTGTGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	29236843	29414801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29390230_29390339_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026799.16_2	chr2	+	825	7	FSM	ENSMUSG00000026799.16	ENST00000357028.6	843	7	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACAGTGACCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	29236852	29414506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29237060_29239857_29240003_29303399_29303531_29361304_29361399_29399434_29399477_29412785_29412864_29414378
ENSMUSG00000026803.18_0	chr2	+	4153	12	FSM	ENSMUSG00000026803.18	ENSMUST00000100237.4	4160	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATGTGTGTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	28950273	28977661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28950316_28954630_28955921_28957014_28957242_28959903_28960090_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648_28974827_28976118
ENSMUSG00000026803.18_10	chr2	+	975	8	FSM	ENSMUSG00000026803.18	ENST00000334270.3	990	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGACTTTCTGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	28959909	28974752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28960094_28961309_28961389_28963900_28964032_28964585_28964821_28969400_28969491_28971023_28971090_28973544_28973631_28974648
ENSMUSG00000026806.16_0	chr2	+	3252	20	FSM	ENSMUSG00000026806.16	ENSMUST00000113853.3	3271	20	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTACAGAGGACTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	28730483	28795577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28730873_28734849_28735107_28735209_28735286_28736005_28736050_28737452_28737524_28738297_28738363_28744782_28744828_28746206_28746249_28747131_28747197_28748747_28748868_28748999_28749107_28749880_28750090_28750727_28750905_28753727_28753788_28764142_28764194_28765701_28765842_28771154_28771237_28776902_28777015_28782390_28782554_28794600
ENSMUSG00000026809.16_0	chr2	-	711	4	FSM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTCTCTGCCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	28586056	28582101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28582130_28582729_28583072_28583635_28583839_28585918
ENSMUSG00000026809.16_3	chr2	-	667	3	ISM	ENSMUSG00000026809.16	ENST00000356311.10	725	4	26	632	26	-632	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGTACTTGGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	28586039	28582728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_28583072_28583635_28583839_28585918
ENSMUSG00000026810.13_0	chr2	+	867	4	FSM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32460871	32463591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32460925_32461217_32461308_32462308_32462412_32462970
ENSMUSG00000026810.13_1	chr2	+	805	3	ISM	ENSMUSG00000026810.13	ENSMUST00000028151.7	869	4	357	0	357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCATCCTTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32461226	32463591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32461308_32462308_32462412_32462970
ENSMUSG00000026811.19_0	chr2	+	2390	6	FSM	ENSMUSG00000026811.19	ENSMUST00000113290.8	2402	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAACTCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32496978	32510810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32497124_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026811.19_1	chr2	+	2528	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095045.9	2536	7	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAACTCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32497024	32510810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32497124_32498053_32498238_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026811.19_2	chr2	+	2383	7	FSM	ENSMUSG00000026811.19	ENSMUST00000095044.10	2394	7	3	8	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAACTCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32497040	32510810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026811.19_4	chr2	+	1965	7	FSM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGAGCATTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32497053	32510424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32497124_32498053_32498109_32499237_32499329_32502235_32502416_32504792_32505181_32508508_32508617_32509351
ENSMUSG00000026811.19_5	chr2	+	1894	6	ISM	ENSMUSG00000026811.19	ENST00000291839.10	1973	7	1003	6	-28	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGAGCATTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32498054	32510424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32498109_32499237_32499329_32502235_32502416_32504792_32505181_32508508_32508617_32509351
ENSMUSG00000026811.19_6	chr2	+	2271	6	FSM	ENSMUSG00000026811.19	ENSMUST00000072111.8	2277	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAACTCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32498082	32510810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32498109_32499237_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026811.19_8	chr2	+	1444	4	FSM	ENSMUSG00000026811.19	ENST00000542456.5	1460	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGAGAGCATTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	32499245	32510424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32499329_32502235_32502416_32508508_32508617_32509351
ENSMUSG00000026811.19_9	chr2	+	2234	5	ISM	ENSMUSG00000026811.19	ENSMUST00000081879.12	2345	6	773	6	13	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCAACTCAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32499248	32510810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32499329_32502235_32502416_32504792_32505200_32508508_32508617_32509351
ENSMUSG00000026812.17_0	chr2	+	1696	11	FSM	ENSMUSG00000026812.17	ENST00000403810.6	1707	11	4	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTATGTGGATCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	28531249	28562512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28531332_28542180_28542244_28548616_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28562140_28562316
ENSMUSG00000026812.17_10	chr2	+	1379	10	FSM	ENSMUSG00000026812.17	ENST00000647078.1	1394	10	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGTGGATTAGATCA	NA	NA	NA	NA	NA	NA	NA	NA	28548624	28562920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28548803_28551593_28551698_28552472_28552626_28553511_28553657_28555019_28555175_28555567_28555642_28560880_28561057_28561777_28561936_28562404_28562517_28562796
ENSMUSG00000026814.17_0	chr2	+	3401	15	FSM	ENSMUSG00000026814.17	ENSMUST00000009705.14	3422	15	0	21	0	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAATAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	32536606	32572649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32537037_32547527_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ENSMUSG00000026814.17_1	chr2	+	3385	15	FSM	ENSMUSG00000026814.17	ENSMUST00000167841.8	3403	15	9	9	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTTCAATTAGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	32536642	32572672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32537037_32547530_32547683_32559434_32559576_32561353_32561520_32562229_32562396_32562848_32562970_32563261_32563437_32563603_32563747_32567564_32567703_32567934_32567974_32568467_32568585_32568902_32569155_32570292_32570348_32571207_32571310_32571448
ENSMUSG00000026816.15_0	chr2	-	2723	12	FSM	ENSMUSG00000026816.15	ENSMUST00000028157.9	2739	12	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCAGCACTGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	28473282	28456329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28457190_28457619_28457797_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ENSMUSG00000026816.15_3	chr2	-	1538	11	FSM	ENSMUSG00000026816.15	ENST00000372108.9	1547	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCGCTGTTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	28472949	28457645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28457815_28458496_28458640_28459303_28459387_28460414_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28467887_28468087_28469529_28469750_28472836
ENSMUSG00000026816.15_4	chr2	-	1221	9	FSM	ENSMUSG00000026816.15	ENST00000372099.10	1235	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCGCTGTTCCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	28473067	28457645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28457815_28458496_28458640_28459303_28459387_28460430_28460529_28460624_28460706_28461124_28461240_28462207_28462313_28463388_28463585_28472836
ENSMUSG00000026817.15_0	chr2	+	2067	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113278.9	2085	7	10	8	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATAAGAAGTGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	32511779	32525062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32511890_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_12	chr2	+	1960	6	ISM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	3011	4	-1056	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATAAGAAGTGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	32518459	32525062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_13	chr2	+	2018	6	FSM	ENSMUSG00000026817.15	ENSMUST00000068271.5	2034	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAGTTATAAGAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	32519524	32525057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32519629_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026817.15_5	chr2	+	2052	7	FSM	ENSMUSG00000026817.15	ENSMUST00000113277.8	2063	7	7	4	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTATAAGAAGTGAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	32515455	32525062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32515551_32518462_32518501_32519860_32519897_32520246_32520411_32521087_32521205_32523305_32523498_32523652
ENSMUSG00000026818.6_0	chr2	-	832	5	FSM	ENSMUSG00000026818.6	ENST00000421286.4	841	5	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGACACCCTCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	28453372	28446206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28446386_28446685_28446884_28447626_28447831_28447942_28448130_28453308
ENSMUSG00000026818.6_1	chr2	-	766	4	ISM	ENSMUSG00000026818.6	ENST00000421286.4	841	5	5247	7	5247	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGACACCCTCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	28448127	28446206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_28446386_28446685_28446884_28447626_28447831_28447942
ENSMUSG00000026819.16_1	chr2	-	3266	10	FSM	ENSMUSG00000026819.16	ENSMUST00000113310.9	3278	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGACAATGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	32341450	32304506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32311314_32311403_32311484_32311612_32341078
ENSMUSG00000026819.16_2	chr2	-	2686	11	FSM	ENSMUSG00000026819.16	ENST00000683206.1	2704	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTCGCTTCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	32311602	32304520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32304788_32305008_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484
ENSMUSG00000026819.16_3	chr2	-	3265	13	FSM	ENSMUSG00000026819.16	ENST00000682371.1	3283	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTCGCTTCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	32320996	32304520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32304788_32305008_32306335_32306420_32306572_32307103_32307272_32307357_32307466_32307735_32307889_32309059_32309219_32310316_32310429_32310667_32310704_32311314_32311403_32311484_32311612_32318579_32318694_32320540
ENSMUSG00000026820.6_0	chr2	+	4968	7	FSM	ENSMUSG00000026820.6	ENSMUST00000028162.5	4978	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTTTTGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	32285917	32295784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32286563_32287549_32287748_32290061_32290121_32290414_32290565_32290889_32291091_32291498_32291617_32292187
ENSMUSG00000026820.6_5	chr2	+	727	7	FSM	ENSMUSG00000026820.6	ENST00000617202.4	730	7	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGAAGCCCCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	32287554	32292289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32287616_32287707_32287748_32290061_32290121_32290418_32290565_32290889_32291091_32291498_32291617_32292187
ENSMUSG00000026820.6_9	chr2	+	665	6	ISM	ENSMUSG00000026820.6	ENST00000617202.4	730	7	155	2	155	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGAAGCCCCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	32287708	32292289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32287748_32290061_32290121_32290418_32290565_32290889_32291091_32291498_32291617_32292187
ENSMUSG00000026821.17_0	chr2	+	3577	18	FSM	ENSMUSG00000026821.17	ENSMUST00000028170.15	3590	18	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGGTTTTACTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28403350	28443093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28403573_28430722_28430834_28432301_28432496_28432866_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ENSMUSG00000026821.17_2	chr2	+	3672	18	FSM	ENSMUSG00000026821.17	ENSMUST00000113893.8	3683	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTACGGCCTGGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	28423377	28443078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28423746_28430722_28430834_28432301_28432496_28432902_28432963_28433565_28433760_28434000_28434399_28435021_28435238_28435426_28435531_28435872_28435958_28437163_28437233_28437545_28437633_28438124_28438158_28438395_28438518_28438681_28438778_28438966_28439169_28439301_28439545_28440460_28440576_28442103
ENSMUSG00000026825.18_2	chr2	-	443	3	FSM	ENSMUSG00000026825.18	ENST00000565702.1	462	3	11	8	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTAACCAGATCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	32205049	32199023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32199077_32202695_32202938_32204901
ENSMUSG00000026826.14_1	chr2	-	3546	8	FSM	ENSMUSG00000026826.14	ENSMUST00000028166.9	3568	8	10	12	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACAGAACTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57005040	56996853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57004729
ENSMUSG00000026826.14_2	chr2	-	3453	8	FSM	ENSMUSG00000026826.14	ENST00000339562.9	3476	8	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGTAAATGAACAGAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	57004947	56996857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_56998425_56998572_56998752_56999074_56999278_57000125_57000290_57000648_57000779_57001587_57002454_57002962_57003085_57004725
ENSMUSG00000026827.13_0	chr2	+	5731	17	FSM	ENSMUSG00000026827.13	ENSMUST00000169687.8	5745	17	4	10	4	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAGCGCTCCATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57127693	57260721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_57128001_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_1	chr2	+	5749	18	FSM	ENSMUSG00000026827.13	ENSMUST00000112618.9	5759	18	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAGCGCTCCATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57128308	57260721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57251797_57251852_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026827.13_3	chr2	+	5605	17	FSM	ENSMUSG00000026827.13	ENSMUST00000028167.3	5620	17	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGCTCCATTTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	57128401	57260724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_57128580_57157984_57158095_57179856_57180029_57194372_57194498_57195819_57195918_57196943_57197108_57228858_57229024_57230075_57230221_57235242_57235437_57245471_57245607_57245771_57245948_57246530_57246663_57247666_57247826_57254042_57254156_57254261_57254341_57254516_57254616_57257363
ENSMUSG00000026831.17_0	chr2	-	778	3	FSM	ENSMUSG00000026831.17	ENSMUST00000086370.11	812	3	24	10	24	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCTCAATTTCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	28356320	28352022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28352447_28355148_28355228_28356045
ENSMUSG00000026833.19_0	chr2	+	2670	6	FSM	ENSMUSG00000026833.19	ENSMUST00000100244.10	2686	6	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAGATAACCTCGATTTG	NA	NA	NA	NA	NA	NA	NA	NA	28083110	28120738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28083475_28098089_28098240_28102543_28102700_28104620_28104841_28112562_28112670_28119065
ENSMUSG00000026833.19_1	chr2	+	948	4	FSM	ENSMUSG00000026833.19	ENST00000277415.15	963	4	9	6	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTGTGGTGTTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	28083157	28104437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28083475_28098089_28098240_28102543_28102700_28104112
ENSMUSG00000026835.16_0	chr2	-	829	7	FSM	ENSMUSG00000026835.16	ENST00000371806.4	832	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTAGCTTCCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	27972995	27966594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27966835_27968258_27968394_27969133_27969264_27969633_27969762_27970569_27970634_27970907_27970962_27972917
ENSMUSG00000026835.16_1	chr2	-	753	6	ISM	ENSMUSG00000026835.16	ENST00000371806.4	832	7	2035	0	2035	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTAGCTTCCCACACAG	NA	NA	NA	NA	NA	NA	NA	NA	27970963	27966594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_27966835_27968258_27968394_27969133_27969264_27969633_27969762_27970569_27970634_27970907
ENSMUSG00000026836.16_0	chr2	-	2829	10	FSM	ENSMUSG00000026836.16	ENST00000684595.1	2846	10	9	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAAATGATGATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	58456104	58336457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_58337686_58338325_58338457_58348896_58349095_58352892_58353169_58358525_58358673_58364184_58364285_58367616_58367829_58369676_58369941_58390495_58390570_58455905
ENSMUSG00000026837.17_1	chr2	+	8384	66	FSM	ENSMUSG00000026837.17	ENSMUST00000028280.14	8406	66	12	10	12	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAGAAACTTGACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	27776448	27929516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27776937_27812028_27812197_27818053_27818268_27819390_27819554_27839638_27839771_27840638_27840771_27841298_27841539_27842284_27842459_27842980_27843038_27848233_27848276_27848496_27848560_27850398_27850474_27852073_27852167_27854079_27854137_27855262_27855317_27855608_27855663_27856941_27856996_27858150_27858205_27859756_27859811_27861458_27861504_27863159_27863214_27863879_27863925_27864455_27864510_27864704_27864750_27865566_27865621_27870483_27870529_27871048_27871103_27875060_27875106_27876732_27876787_27879150_27879259_27880049_27880104_27882005_27882060_27885717_27885763_27885872_27885927_27886880_27886926_27887574_27887629_27888737_27888792_27891581_27891636_27892494_27892603_27893872_27893963_27894053_27894108_27895190_27895299_27897759_27897868_27899119_27899174_27900035_27900090_27900181_27900290_27901096_27901151_27901253_27901362_27902686_27902741_27903471_27903580_27904118_27904173_27904381_27904436_27905865_27905920_27906450_27906505_27907106_27907215_27907292_27907347_27907437_27907492_27908452_27908561_27909948_27910003_27910779_27910816_27912292_27912347_27914616_27914873_27915604_27915718_27918978_27919048_27922602_27922837_27926881
ENSMUSG00000026842.17_0	chr2	+	6313	11	FSM	ENSMUSG00000026842.17	ENSMUST00000075759.13	6327	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACAGACTGCTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31578569	31693546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31579955_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026842.17_2	chr2	+	5770	11	FSM	ENSMUSG00000026842.17	ENSMUST00000028190.13	5794	11	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAGGTCCTGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	31649978	31694239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31650128_31668345_31668520_31668932_31669229_31674518_31674792_31680282_31680368_31680673_31680852_31682249_31682435_31684553_31684707_31686984_31687075_31687574_31687740_31690217
ENSMUSG00000026843.16_0	chr2	+	3259	19	FSM	ENSMUSG00000026843.16	ENSMUST00000113482.8	3268	19	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGTTTTGTTTGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	31462670	31507537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509_31505638_31506190
ENSMUSG00000026843.16_10	chr2	+	3633	18	FSM	ENSMUSG00000026843.16	ENSMUST00000055244.13	3648	18	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTCTTAGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31462838	31507526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31462966_31473166_31473273_31482474_31482509_31484854_31484905_31485261_31485334_31486605_31486664_31488549_31488713_31490464_31490564_31493222_31493328_31494625_31494729_31495254_31495356_31498096_31498239_31501590_31501752_31502496_31502571_31502848_31502921_31503042_31503120_31504722_31504795_31505509
ENSMUSG00000026848.15_0	chr2	+	3022	5	FSM	ENSMUSG00000026848.15	ENSMUST00000028199.12	3039	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACGTAACTTTCCTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	30842979	30849019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30843236_30843763_30844030_30845789_30845966_30846459_30846588_30846823
ENSMUSG00000026849.19_0	chr2	-	1387	5	FSM	ENSMUSG00000026849.19	ENSMUST00000028200.9	1401	5	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGGTGGCTTTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30857933	30850640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30851210_30853486_30853615_30853705_30853882_30857101_30857368_30857685
ENSMUSG00000026851.10_0	chr2	-	1958	9	FSM	ENSMUSG00000026851.10	ENSMUST00000028205.10	1984	9	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAGAAAGAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30871944	30862205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30863314_30863703_30863803_30863912_30864050_30865902_30866101_30867903_30867982_30868906_30868978_30870010_30870063_30871494_30871555_30871789
ENSMUSG00000026853.16_0	chr2	-	4200	15	FSM	ENSMUSG00000026853.16	ENSMUST00000102855.8	4224	15	21	3	21	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCTCACACTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	30305762	30290485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323_30305455_30305651
ENSMUSG00000026853.16_5	chr2	-	3820	14	FSM	ENSMUSG00000026853.16	ENSMUST00000028207.13	3833	14	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATTTGAAGTCTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	30305819	30291119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30292806_30293500_30293639_30294539_30294603_30294949_30295086_30295177_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994_30303259_30305323
ENSMUSG00000026853.16_8	chr2	-	1702	11	FSM	ENSMUSG00000026853.16	ENST00000681325.1	1710	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCCTCCAGTTTGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30303251	30292509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30292806_30293500_30293624_30295188_30295301_30295396_30295517_30296379_30296481_30296967_30297147_30297717_30297893_30298067_30298234_30298752_30298807_30299968_30300088_30302994
ENSMUSG00000026854.17_0	chr2	+	5072	25	FSM	ENSMUSG00000026854.17	ENSMUST00000102849.11	5088	25	12	4	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGCTCTGGTGAACCTA	NA	NA	NA	NA	NA	NA	NA	NA	30872302	30913594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30872411_30886059_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026854.17_11	chr2	+	4949	24	FSM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTAAGATGCTCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	30886069	30913589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30886160_30888784_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026854.17_14	chr2	+	2832	23	ISM	ENSMUSG00000026854.17	ENSMUST00000170476.8	4970	24	2664	2099	2664	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGCCATGCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30888717	30911495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026854.17_5	chr2	+	2878	24	FSM	ENSMUSG00000026854.17	ENST00000315480.9	2879	24	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGCCATGCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30872376	30911495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30872411_30888705_30888881_30890068_30890123_30892567_30892631_30892927_30893060_30894415_30894513_30894943_30895014_30896395_30896510_30897790_30897870_30900177_30900626_30900990_30901135_30901392_30901509_30901634_30901808_30902318_30902414_30906299_30906334_30906504_30906551_30907140_30907322_30907396_30907524_30907693_30907864_30907944_30908027_30908726_30908836_30909796_30909900_30910840_30910913_30911335
ENSMUSG00000026856.15_0	chr2	+	2239	8	FSM	ENSMUSG00000026856.15	ENSMUST00000028209.15	2251	8	7	5	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGGCTGAGCATACATT	NA	NA	NA	NA	NA	NA	NA	NA	30282272	30290536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30282525_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUSG00000026856.15_3	chr2	+	2277	9	FSM	ENSMUSG00000026856.15	ENSMUST00000123202.8	2294	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTGGAGGCTGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	30282436	30290531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30282525_30283658_30283866_30285670_30285772_30285988_30286074_30286164_30286265_30286443_30286543_30287030_30287160_30287479_30287570_30289153
ENSMUSG00000026857.10_0	chr2	+	1370	4	FSM	ENSMUSG00000026857.10	ENSMUST00000041830.10	1387	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGTCTGTGTGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	30697849	30713040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30698096_30709640_30709845_30710460_30710714_30712373
ENSMUSG00000026858.19_0	chr2	+	3368	16	FSM	ENSMUSG00000026858.19	ENSMUST00000077977.14	3381	16	9	4	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTCTCTGTGTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	30254253	30275529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30254318_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ENSMUSG00000026858.19_4	chr2	+	3550	16	FSM	ENSMUSG00000026858.19	ENSMUST00000100214.10	3586	16	29	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGACTCTTCTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30254336	30275524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30254588_30257563_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ENSMUSG00000026858.19_5	chr2	+	3300	15	ISM	ENSMUSG00000026858.19	ENSMUST00000100214.10	3586	16	3255	7	3255	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGACTCTTCTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30257562	30275524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30257800_30258888_30259100_30260306_30260420_30261126_30261245_30261544_30261682_30265684_30265803_30266657_30266759_30267490_30267607_30267982_30268056_30268185_30268273_30271649_30271749_30271950_30272086_30272977_30273032_30273601_30273719_30273940
ENSMUSG00000026860.17_0	chr2	-	1746	12	FSM	ENSMUSG00000026860.17	ENSMUST00000100215.11	1749	12	1	2	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30249251	30234822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026860.17_1	chr2	-	1796	11	FSM	ENSMUSG00000026860.17	ENSMUST00000028214.15	1810	11	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30249316	30234822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026860.17_7	chr2	-	1685	10	FSM	ENSMUSG00000026860.17	ENSMUST00000113620.10	1694	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30249268	30234822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30235440_30235710_30235952_30236364_30236466_30236622_30236713_30237092_30237117_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026860.17_9	chr2	-	1850	13	FSM	ENSMUSG00000026860.17	ENSMUST00000113621.10	1851	13	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGATCTCAGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30249343	30234822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30235440_30235710_30235952_30236070_30236086_30236364_30236466_30236622_30236713_30237092_30237117_30238566_30238630_30239237_30239250_30240299_30240393_30240595_30240730_30244864_30244994_30245272_30245415_30249154
ENSMUSG00000026864.14_0	chr2	+	3661	9	FSM	ENSMUSG00000026864.14	ENSMUST00000028222.13	3672	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTACATTGCAACTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34661992	34667559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34662159_34662240_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUSG00000026864.14_11	chr2	+	2529	8	FSM	ENSMUSG00000026864.14	ENST00000680272.1	2540	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTCGGTGGGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	34662089	34666556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664660_34664785_34665077_34665246_34665562
ENSMUSG00000026864.14_20	chr2	+	2594	8	FSM	ENSMUSG00000026864.14	ENSMUST00000100171.3	2613	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGATTCTCAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34662116	34666534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34662459_34662570_34662803_34663181_34663320_34663832_34663946_34664039_34664431_34664546_34664785_34665077_34665246_34665562
ENSMUSG00000026867.20_0	chr2	-	8320	27	FSM	ENSMUSG00000026867.20	ENSMUST00000102800.9	8339	27	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34645232	34564612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277_34644572_34644989
ENSMUSG00000026867.20_6	chr2	-	5678	26	FSM	ENSMUSG00000026867.20	ENSMUST00000028224.15	5695	26	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	34644556	34566996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607327_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ENSMUSG00000026867.20_8	chr2	-	5739	26	FSM	ENSMUSG00000026867.20	ENSMUST00000113099.10	5758	26	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	34644554	34566996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34568190_34568444_34568643_34571646_34571720_34574193_34574408_34578869_34579058_34580473_34580634_34581117_34581228_34583384_34583515_34585497_34585621_34589837_34589919_34590774_34590863_34594177_34594543_34594647_34594726_34596031_34596152_34596709_34596845_34599123_34599265_34602176_34602351_34605216_34605343_34607264_34607395_34610579_34610741_34615054_34615245_34615390_34615526_34617227_34617315_34618342_34619187_34620474_34620693_34644277
ENSMUSG00000026869.13_0	chr2	-	4385	10	FSM	ENSMUSG00000026869.13	ENSMUST00000028225.12	4397	10	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACCCAAGAGAAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	34760965	34739748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755538_34755668_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026869.13_10	chr2	-	1372	9	FSM	ENSMUSG00000026869.13	ENST00000373904.5	1389	9	11	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCCCTTTCCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	34760925	34742592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34742846_34744263_34744405_34746459_34746570_34747649_34747842_34750643_34750787_34753468_34753579_34755993_34756108_34756904_34757050_34760761
ENSMUSG00000026869.13_16	chr2	-	200	2	FSM	ENSMUSG00000026869.13	ENST00000625444.1	217	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTCAATAATGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	34760924	34756070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34756108_34760761
ENSMUSG00000026872.19_0	chr2	-	9103	9	FSM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGATCTTTTAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	44914042	44873242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44879166_44884490_44884672_44886037_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_44913856
ENSMUSG00000026872.19_1	chr2	-	8912	8	ISM	ENSMUSG00000026872.19	ENST00000638007.1	9123	9	943	8	943	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGATCTTTTAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	44913111	44873242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_44879166_44884490_44884672_44886037_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858
ENSMUSG00000026872.19_11	chr2	-	5170	11	FSM	ENSMUSG00000026872.19	ENST00000636026.2	5185	11	9	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGTAAAGAGAAGAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	45003285	44877470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44878891_44879002_44879166_44884490_44884672_44886037_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_45000027_45000170_45002834
ENSMUSG00000026872.19_2	chr2	-	8959	9	FSM	ENSMUSG00000026872.19	ENST00000636413.1	8967	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGATCTTTTAAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	44914134	44873242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44879166_44884490_44884672_44886037_44888008_44888895_44889005_44891611_44891827_44892527_44892717_44907408_44907481_44912858_44913117_44914092
ENSMUSG00000026872.19_26	chr2	-	526	2	FSM	ENSMUSG00000026872.19	ENST00000475115.3	535	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	45007460	45006436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_45006714_45007211
ENSMUSG00000026873.10_0	chr2	-	3737	15	FSM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTAAGCGTGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	34803988	34783772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628_34801815_34803952
ENSMUSG00000026873.10_1	chr2	-	3689	14	ISM	ENSMUSG00000026873.10	ENSMUST00000028232.7	3741	15	2186	4	2186	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTAAGCGTGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	34801802	34783772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_34786074_34787068_34787165_34788085_34788172_34788935_34789024_34789594_34789757_34791071_34791140_34793147_34793269_34793363_34793433_34794066_34794163_34795461_34795611_34796469_34796571_34797016_34797113_34801175_34801258_34801628
ENSMUSG00000026875.15_0	chr2	-	3425	7	FSM	ENSMUSG00000026875.15	ENSMUST00000172159.8	3436	7	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGATTTGTACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34848172	34831769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970
ENSMUSG00000026875.15_1	chr2	-	2061	9	FSM	ENSMUSG00000026875.15	ENSMUST00000028234.12	2069	9	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAAGCTTCAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34851597	34833275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524_34848655_34851531
ENSMUSG00000026875.15_2	chr2	-	1978	8	ISM	ENSMUSG00000026875.15	ENSMUST00000028234.12	2069	9	2960	8	-462	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAAGCTTCAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34848637	34833275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_34834104_34835409_34835559_34836693_34836872_34838152_34838564_34839050_34839117_34846207_34846293_34847970_34848119_34848524
ENSMUSG00000026878.18_0	chr2	-	3058	8	FSM	ENSMUSG00000026878.18	ENSMUST00000028238.15	3081	8	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTGAACATAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	35091120	35070227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35072460_35073404_35073436_35073755_35073844_35076685_35076753_35079911_35080090_35081523_35081578_35082632_35082692_35090771
ENSMUSG00000026879.15_0	chr2	+	2596	18	FSM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	8861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTCTCCCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35146397	35197897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35146486_35156831_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026879.15_21	chr2	+	2511	17	ISM	ENSMUSG00000026879.15	ENSMUST00000201185.4	2607	18	10437	5	10437	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTCTCCCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35156828	35197897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_35156916_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026879.15_26	chr2	+	2636	17	FSM	ENSMUSG00000026879.15	ENSMUST00000028239.8	2653	17	10	7	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTTCTCCCCAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35172401	35197897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35172614_35173916_35174122_35174685_35174841_35180344_35180507_35182598_35182749_35183489_35183580_35184946_35185080_35186136_35186226_35186377_35186594_35188806_35188941_35191477_35191569_35192502_35192674_35193179_35193355_35194275_35194401_35194592_35194671_35196557_35196619_35197508
ENSMUSG00000026880.12_0	chr2	-	2774	7	FSM	ENSMUSG00000026880.12	ENSMUST00000028241.7	2787	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGACTCTGTGAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	35226980	35204002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35206068_35210342_35210478_35211494_35211699_35213675_35213759_35215325_35215399_35216432_35216537_35226870
ENSMUSG00000026883.18_0	chr2	+	5571	17	FSM	ENSMUSG00000026883.18	ENSMUST00000112986.9	5580	17	2	7	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35448279	35620999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35448625_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069_35618141_35619122
ENSMUSG00000026883.18_2	chr2	+	6179	15	FSM	ENSMUSG00000026883.18	ENSMUST00000112992.9	6184	15	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35512171	35620999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35512296_35533899_35534004_35551503_35551638_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35613040_35613235_35617437_35617526_35618069
ENSMUSG00000026883.18_3	chr2	+	6347	14	FSM	ENSMUSG00000026883.18	ENSMUST00000065001.12	6392	14	36	9	36	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTTTAAGCCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35582041	35620995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35582423_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUSG00000026883.18_7	chr2	+	6046	14	FSM	ENSMUSG00000026883.18	ENSMUST00000112983.8	6051	14	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAAGCCTGACTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35586743	35620999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35586820_35597659_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUSG00000026883.18_9	chr2	+	5967	13	ISM	ENSMUSG00000026883.18	ENSMUST00000112983.8	6051	14	10915	9	10915	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTTTAAGCCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35597658	35620995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_35597814_35598825_35598925_35599829_35600385_35602877_35603023_35603117_35603263_35605280_35605518_35607082_35607285_35608771_35608951_35609864_35610754_35611272_35611426_35613040_35613235_35617437_35617526_35618069
ENSMUSG00000026885.14_0	chr2	-	3160	10	FSM	ENSMUSG00000026885.14	ENSMUST00000028248.11	3176	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGACACTGTTTCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	35869625	35641257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35642505_35674100_35674208_35685368_35685615_35707734_35707834_35779276_35779393_35780283_35780380_35792581_35793158_35830685_35830820_35834874_35834972_35869183
ENSMUSG00000026885.14_1	chr2	-	3061	9	FSM	ENSMUSG00000026885.14	ENSMUST00000112976.9	3077	9	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGTTTCTCAAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	35869620	35641252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35642505_35674100_35674208_35685368_35685615_35779276_35779393_35780283_35780380_35792581_35793158_35830685_35830820_35834874_35834972_35869183
ENSMUSG00000026887.10_0	chr2	+	2611	7	FSM	ENSMUSG00000026887.10	ENSMUST00000028250.9	2623	7	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTGATTCCAGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	36026407	36080654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36026712_36031457_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36067126_36067287_36079086
ENSMUSG00000026887.10_3	chr2	+	640	5	FSM	ENSMUSG00000026887.10	ENST00000394315.3	650	5	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAGTCAGCAGTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	36031470	36079160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36031670_36037914_36038071_36043604_36043724_36049610_36049703_36079086
ENSMUSG00000026888.15_0	chr2	-	1974	14	FSM	ENSMUSG00000026888.15	ENSMUST00000028252.14	1986	14	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAAATAGACTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	64853126	64742831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_64743198_64745059_64745154_64747172_64747261_64747378_64747452_64747542_64747660_64753880_64753962_64760243_64760340_64760529_64760641_64763563_64763702_64766760_64766836_64768712_64768835_64783905_64784063_64851430_64851564_64852803
ENSMUSG00000026889.13_0	chr2	-	2596	6	FSM	ENSMUSG00000026889.13	ENSMUST00000028251.10	2617	6	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACAGTATCTATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	36026773	36006099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_36007987_36010824_36010911_36012863_36012951_36017136_36017264_36024146_36024276_36026493
ENSMUSG00000026890.20_0	chr2	-	3168	8	FSM	ENSMUSG00000026890.20	ENSMUST00000112966.10	3188	8	13	7	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAATGCCATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	35994059	35971971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35974088_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35992869_35992992_35993357_35993541_35993905
ENSMUSG00000026890.20_1	chr2	-	3263	7	FSM	ENSMUSG00000026890.20	ENST00000559895.5	3277	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAAACCCAGAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35988564	35971975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35988110
ENSMUSG00000026890.20_4	chr2	-	3263	9	FSM	ENSMUSG00000026890.20	ENSMUST00000112961.10	3292	9	19	10	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAACCCAGAATGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	35994053	35971974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35974088_35977379_35977484_35980973_35981149_35981331_35981428_35981617_35981719_35984224_35984446_35992869_35992992_35993357_35993541_35993905
ENSMUSG00000026895.8_0	chr2	-	836	4	FSM	ENSMUSG00000026895.8	ENSMUST00000070112.6	861	4	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	3337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAGGAAACAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35939406	35926350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35926654_35929723_35929890_35934361_35934526_35939203
ENSMUSG00000026896.15_2	chr2	-	3138	15	FSM	ENSMUSG00000026896.15	ENST00000649979.2	3158	15	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGATTTTAATTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	62476297	62428208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_62428433_62428522_62428614_62429129_62429321_62431733_62431896_62433763_62433914_62435784_62436045_62436524_62436801_62437316_62437441_62439528_62439646_62440784_62441003_62442053_62442265_62447604_62447829_62453736_62453912_62469603_62469843_62475821
ENSMUSG00000026904.18_0	chr2	+	5643	27	FSM	ENSMUSG00000026904.18	ENST00000375514.9	5662	27	11	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTGTACAATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	61876813	62157091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61877037_61978323_61978476_61988549_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724_62064914_62073705_62073798_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62143625_62143694_62146908_62147026_62147819_62147859_62155068
ENSMUSG00000026904.18_13	chr2	+	5473	27	FSM	ENSMUSG00000026904.18	ENST00000446997.6	5490	27	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTACCTACTTTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	61876894	62157064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61877037_61988549_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724_62064914_62073705_62073798_62074695_62074786_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62143625_62143694_62146908_62147026_62147819_62147859_62155068
ENSMUSG00000026904.18_20	chr2	+	3359	24	FSM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAAACCCTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	61876934	62155214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61877037_61988549_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724_62064914_62073705_62073798_62074695_62074786_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62155068
ENSMUSG00000026904.18_31	chr2	+	3258	23	ISM	ENSMUSG00000026904.18	ENST00000421911.1	3374	24	111620	9	111620	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAAACCCTCTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	61988548	62155214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_61988632_62021083_62021231_62041698_62041838_62058910_62059072_62064724_62064914_62073705_62073798_62074695_62074786_62080722_62080881_62083654_62083743_62087802_62087950_62094296_62094398_62097744_62097920_62098484_62098619_62099004_62099251_62112217_62112324_62117145_62117308_62119051_62119166_62120253_62120416_62127099_62127352_62128495_62128565_62134147_62134322_62134996_62135120_62155068
ENSMUSG00000026914.16_0	chr2	+	1524	12	FSM	ENSMUSG00000026914.16	ENSMUST00000028278.14	1541	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCCATGTCTCCCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	61542046	61630712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61542218_61550787_61550916_61553053_61553106_61590979_61591052_61591318_61591439_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777_61615904_61627738_61627802_61630325
ENSMUSG00000026914.16_9	chr2	+	701	7	FSM	ENSMUSG00000026914.16	ENST00000427142.1	711	7	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAGGTAAAAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	61590983	61615895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61591052_61591318_61591429_61594180_61594252_61595192_61595344_61607016_61607125_61614176_61614252_61615777
ENSMUSG00000026915.17_0	chr2	-	16335	17	FSM	ENSMUSG00000026915.17	ENSMUST00000028279.10	16348	17	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGAATGGCCTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	37537293	37459888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537127
ENSMUSG00000026915.17_2	chr2	-	2936	18	FSM	ENSMUSG00000026915.17	ENST00000360998.3	2950	18	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTGTTTTATCTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	37593331	37473485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37474119_37476521_37476567_37480668_37480793_37486715_37486857_37489132_37489268_37490756_37490916_37492946_37493147_37493933_37494027_37514184_37514297_37514504_37514603_37515189_37515302_37516493_37516590_37517446_37517539_37525435_37525581_37530862_37531029_37535482_37535704_37537061_37537298_37593203
ENSMUSG00000026917.16_0	chr2	+	2876	14	FSM	ENSMUSG00000026917.16	ENSMUST00000113952.10	2890	14	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTTCCATATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	27405180	27426545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27405293_27408640_27408805_27409360_27409470_27409754_27409829_27410338_27410429_27410584_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_3	chr2	+	1120	11	FSM	ENSMUSG00000026917.16	ENST00000513652.1	1131	11	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCAGCTCCTCATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	27408720	27425125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27408805_27409360_27409464_27410558_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026917.16_7	chr2	+	1038	10	ISM	ENSMUSG00000026917.16	ENST00000513652.1	1131	11	643	6	643	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCAGCTCCTCATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	27409358	27425125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_27409464_27410558_27410675_27410839_27410924_27415117_27415174_27418285_27418333_27421650_27421727_27423004_27423039_27423348_27423424_27423779_27423868_27424768
ENSMUSG00000026918.17_0	chr2	-	5247	12	FSM	ENSMUSG00000026918.17	ENSMUST00000077737.13	5272	12	9	16	-4	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGGAAAGAAGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	27365689	27335606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUSG00000026918.17_3	chr2	-	5390	12	FSM	ENSMUSG00000026918.17	ENSMUST00000028282.15	5419	12	12	17	12	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGGGAAAGAAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	27365398	27335607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365153
ENSMUSG00000026918.17_8	chr2	-	5281	13	FSM	ENSMUSG00000026918.17	ENSMUST00000113941.9	5289	13	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAATAAAAAGGGAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	27365677	27335611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27338593_27339212_27339339_27340268_27340562_27342844_27343087_27343411_27343463_27344324_27344517_27346920_27347050_27349468_27349841_27351540_27351756_27352432_27352581_27353466_27353605_27353900_27354206_27365588
ENSMUSG00000026921.21_0	chr2	+	1379	10	FSM	ENSMUSG00000026921.21	ENSMUST00000238951.2	1389	10	4	6	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGCTGTTGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	26471071	26482688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26471254_26475596_26475688_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUSG00000026921.21_1	chr2	+	1154	9	FSM	ENSMUSG00000026921.21	ENSMUST00000239075.2	1163	9	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAGCTGTTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	26476643	26482686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26476694_26479056_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUSG00000026921.21_2	chr2	+	1105	8	ISM	ENSMUSG00000026921.21	ENSMUST00000150404.10	892	9	501	-231	501	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAGCTGTTGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	26479055	26482686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_26479182_26479341_26479459_26480391_26480508_26480668_26480765_26480910_26481076_26481675_26481741_26482129_26482293_26482429
ENSMUSG00000026922.14_0	chr2	-	1472	6	FSM	ENSMUSG00000026922.14	ENSMUST00000028286.12	1489	6	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGTGGGTAGAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	26494332	26483073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26483775_26484791_26484865_26486091_26486188_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026922.14_4	chr2	-	934	5	FSM	ENSMUSG00000026922.14	ENST00000371694.7	950	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTATGTAACTTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	26494243	26483426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26483775_26484791_26484865_26486302_26486479_26487215_26487350_26494040
ENSMUSG00000026923.16_0	chr2	-	9479	34	FSM	ENSMUSG00000026923.16	ENSMUST00000028288.5	9488	34	6	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGAGTGTGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26393828	26347917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26350989_26352159_26352258_26352353_26352502_26353721_26354018_26354817_26354984_26355074_26355163_26355361_26355579_26356478_26356628_26357640_26358043_26358243_26358816_26359616_26359730_26359812_26360071_26360285_26360419_26360833_26361019_26361163_26361318_26362082_26362285_26362795_26363025_26363692_26363846_26364132_26364253_26366085_26366200_26366359_26366506_26366958_26367152_26367891_26368003_26368081_26368316_26368618_26368733_26369458_26369573_26369882_26370069_26370235_26370392_26370985_26371220_26371582_26371706_26374279_26374619_26375198_26375462_26391892_26391972_26393509
ENSMUSG00000026924.18_0	chr2	-	8786	31	FSM	ENSMUSG00000026924.18	ENSMUST00000114082.9	8797	31	0	11	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26335226	26299453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26300966_26302847_26302926_26303690_26303751_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ENSMUSG00000026924.18_1	chr2	-	8708	30	FSM	ENSMUSG00000026924.18	ENSMUST00000091252.5	8737	30	20	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAACTTAATTTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	26335208	26299453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26300966_26302847_26302926_26304382_26304458_26305318_26305414_26305645_26305784_26306128_26306241_26306382_26306440_26306645_26306724_26309632_26309783_26311385_26311469_26312019_26312266_26313465_26313650_26313894_26314009_26314428_26314570_26315205_26315312_26315487_26315600_26315778_26315897_26316091_26316174_26316462_26316561_26318151_26318398_26318826_26318966_26319073_26319136_26319385_26319529_26320088_26320264_26320405_26320605_26321116_26321241_26323342_26323441_26325923_26326061_26328398_26332083_26335086
ENSMUSG00000026925.17_0	chr2	-	4129	10	FSM	ENSMUSG00000026925.17	ENSMUST00000145701.8	4147	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACAACTGGCATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	26299202	26286268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26287984_26288567_26288705_26289244_26289361_26289424_26289587_26290047_26290156_26290384_26290505_26290897_26291023_26291612_26291711_26292111_26292236_26297778
ENSMUSG00000026926.15_0	chr2	+	3119	13	FSM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	7	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACTAGAGTGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	26279357	26287125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026926.15_6	chr2	+	1627	11	FSM	ENSMUSG00000026926.15	ENSMUST00000114093.2	1638	11	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTACCACTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	26279362	26283945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26279445_26279947_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529
ENSMUSG00000026926.15_9	chr2	+	3034	12	ISM	ENSMUSG00000026926.15	ENSMUST00000076431.13	3135	13	595	9	586	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACTAGAGTGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	26279945	26287125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_26280151_26280242_26280323_26280506_26280590_26281095_26281191_26281877_26281979_26282423_26282688_26282917_26283011_26283097_26283217_26283308_26283400_26283529_26283593_26285036_26285182_26285430
ENSMUSG00000026927.18_0	chr2	-	1936	8	FSM	ENSMUSG00000026927.18	ENSMUST00000077983.13	1955	8	11	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCATTTAGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26279298	26272821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26279160
ENSMUSG00000026927.18_1	chr2	-	2008	9	FSM	ENSMUSG00000026927.18	ENSMUST00000028293.12	2031	9	15	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCATTTAGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26279301	26272821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26279160
ENSMUSG00000026927.18_2	chr2	-	2075	9	FSM	ENSMUSG00000026927.18	ENSMUST00000114100.10	2099	9	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCATTTAGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26279287	26272821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278927_26279078_26279160
ENSMUSG00000026927.18_4	chr2	-	2172	10	FSM	ENSMUSG00000026927.18	ENSMUST00000114102.10	2193	10	13	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCATTTAGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	26279315	26272821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26273707_26274693_26274834_26275094_26275158_26275509_26275622_26276001_26276076_26276915_26277324_26277567_26277684_26278503_26278573_26278927_26279078_26279160
ENSMUSG00000026930.16_0	chr2	+	3370	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066936.9	3384	14	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTGTGGCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26205534	26238243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
ENSMUSG00000026930.16_2	chr2	+	3103	13	FSM	ENSMUSG00000026930.16	ENSMUST00000078616.12	3127	13	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTGTGGCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26205621	26238243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26205733_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26234613_26234771_26235162_26235372_26236818
ENSMUSG00000026930.16_5	chr2	+	3418	14	FSM	ENSMUSG00000026930.16	ENSMUST00000066889.13	3432	14	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTGTGGCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26209792	26238243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26210039_26212425_26212648_26213519_26213656_26213900_26214044_26214424_26214549_26214809_26214926_26215348_26215505_26216225_26216335_26217303_26217428_26229647_26229719_26230416_26230597_26234613_26234771_26235162_26235372_26236818
ENSMUSG00000026930.16_6	chr2	+	2036	5	FSM	ENSMUSG00000026930.16	ENSMUST00000114134.9	2043	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGTGTGGCTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26220403	26238243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26220578_26229647_26229719_26234613_26234771_26235162_26235372_26236818
ENSMUSG00000026932.15_0	chr2	-	6356	6	FSM	ENSMUSG00000026932.15	ENSMUST00000028300.6	6378	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCTTTCCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	26012815	25945553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_26012700
ENSMUSG00000026932.15_1	chr2	-	6655	6	FSM	ENSMUSG00000026932.15	ENSMUST00000114159.9	6675	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCAGCTTTCCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	25982176	25945553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25950486_25951584_25951683_25952203_25952310_25954465_25954631_25979554_25980495_25981762
ENSMUSG00000026933.18_16	chr2	-	5557	18	FSM	ENSMUSG00000026933.18	ENST00000409386.3	5566	18	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAAGCCGGCAGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	25873004	25819019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25845271_25845305_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026933.18_2	chr2	-	5847	17	FSM	ENSMUSG00000026933.18	ENST00000389532.9	5864	17	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTAGCGTACTTTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	25873235	25818927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25820041_25823602_25823722_25824231_25824348_25825473_25825577_25825861_25826071_25826526_25826664_25827957_25830326_25830876_25830962_25831389_25831482_25834437_25834616_25834953_25835051_25835145_25835286_25842689_25842832_25846258_25846340_25855674_25855837_25856697_25856961_25872793
ENSMUSG00000026938.11_0	chr2	-	1352	10	FSM	ENSMUSG00000026938.11	ENSMUST00000028307.9	1374	10	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCAGAGGCCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	25518031	25514688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25515101_25515224_25515360_25515445_25515576_25516023_25516152_25516267_25516304_25516652_25516689_25516978_25517015_25517289_25517344_25517447_25517562_25517760
ENSMUSG00000026939.13_0	chr2	-	782	5	FSM	ENSMUSG00000026939.13	ENSMUST00000142087.2	795	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGAGGTTGTTCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	25512009	25510083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25510543_25511077_25511186_25511386_25511471_25511619_25511687_25511945
ENSMUSG00000026939.13_2	chr2	-	265	3	FSM	ENSMUSG00000026939.13	ENST00000290079.9	271	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGGCCCAGAGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	25511685	25511074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25511186_25511382_25511471_25511619
ENSMUSG00000026939.13_3	chr2	-	193	2	ISM	ENSMUSG00000026939.13	ENST00000290079.9	271	3	221	6	221	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGGGCCCAGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	25511466	25511076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25511186_25511382
ENSMUSG00000026941.17_1	chr2	-	3306	25	FSM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCGGTAGGAACCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	25460250	25453549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25453720_25454177_25454287_25454363_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397_25459529_25459705_25459832_25459918_25460093_25460168
ENSMUSG00000026941.17_2	chr2	-	3223	24	ISM	ENSMUSG00000026941.17	ENST00000317446.7	3321	25	167	7	167	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCGGTAGGAACCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	25460091	25453549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25453720_25454177_25454287_25454363_25454492_25454587_25454723_25454836_25454984_25455107_25455199_25455291_25455411_25455495_25455634_25455722_25455943_25456031_25456169_25456257_25456393_25456463_25456581_25457138_25457271_25457364_25457494_25457597_25457787_25457870_25457956_25458196_25458371_25458469_25458559_25458641_25458780_25458970_25459097_25459240_25459326_25459397_25459529_25459705_25459832_25459918
ENSMUSG00000026942.14_0	chr2	-	3036	11	FSM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGATTCTTGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	25436950	25407999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877_25429097_25436873
ENSMUSG00000026942.14_1	chr2	-	2960	10	ISM	ENSMUSG00000026942.14	ENSMUST00000028311.13	3044	11	7855	6	7825	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGATTCTTGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	25429097	25407999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428877
ENSMUSG00000026942.14_10	chr2	-	2144	11	FSM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGTGCTGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25436922	25408884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856_25429097_25436873
ENSMUSG00000026942.14_9	chr2	-	2090	10	ISM	ENSMUSG00000026942.14	ENSMUST00000114234.2	2151	11	7831	7	7831	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTGTGCTGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	25429091	25408884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25409641_25410339_25410489_25414351_25414530_25414878_25415161_25417485_25417561_25418243_25418319_25420298_25420461_25426687_25426787_25427082_25427162_25428856
ENSMUSG00000026944.19_0	chr2	+	8001	48	FSM	ENSMUSG00000026944.19	ENSMUST00000102919.4	8033	48	16	16	16	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAGCAAAAAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	25318730	25338536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25318848_25322007_25322102_25323109_25323222_25323305_25323470_25323693_25323822_25323975_25324087_25324320_25324540_25324901_25325270_25325510_25325671_25326379_25326509_25326600_25326766_25326841_25326939_25327256_25327431_25327499_25327603_25327676_25327792_25327904_25328096_25328242_25328394_25328469_25328675_25328812_25328978_25329078_25329260_25329338_25329552_25330536_25330734_25330821_25331005_25331199_25331385_25331490_25331612_25331886_25332124_25332202_25332410_25332661_25332765_25332846_25333167_25333240_25333455_25333540_25333647_25333737_25333850_25333938_25334000_25334081_25334257_25334336_25334453_25334533_25334682_25334825_25334950_25335083_25335217_25335319_25335438_25335561_25335741_25335981_25336124_25336222_25336358_25336449_25336554_25336626_25336720_25336802_25336906_25336989_25337128_25337211_25337413_25337852
ENSMUSG00000026946.10_0	chr2	-	1290	8	FSM	ENSMUSG00000026946.10	ENSMUST00000028314.9	1291	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTGATGCAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	51863236	51838499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_51838789_51839995_51840103_51842453_51842641_51842787_51842895_51845937_51846101_51848908_51849005_51850582_51850673_51862985
ENSMUSG00000026946.10_1	chr2	-	1106	8	FSM	ENSMUSG00000026946.10	ENSMUST00000112705.9	1130	8	7	17	-5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAACAAAAAATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	51863021	51838533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_51838789_51839995_51840103_51842453_51842641_51842787_51842895_51845937_51846101_51848908_51849005_51850582_51850673_51862920
ENSMUSG00000026950.19_23	chr2	-	22654	164	FSM	ENSMUSG00000026950.19	ENST00000427231.7	22666	164	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAAGACCTCCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52225767	52027267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52040548_52040642_52040978_52041072_52041375_52041469_52043067_52043161_52043694_52043788_52044581_52044675_52046366_52046460_52047302_52047396_52047843_52047937_52049488_52049582_52050667_52050761_52051382_52051488_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533_52067639_52067980_52068086_52069473_52069579_52073284_52073393_52073743_52073849_52076023_52076129_52077422_52077528_52078694_52078800_52079610_52079716_52079865_52079971_52081937_52082043_52082481_52082587_52083181_52083287_52083887_52083999_52084391_52084491_52085431_52085537_52085631_52085737_52086303_52086412_52087808_52087914_52089415_52089524_52090637_52090743_52091409_52091515_52091825_52092024_52092520_52092635_52094237_52094346_52094635_52094741_52094838_52094944_52095633_52095739_52096077_52096276_52096676_52096791_52096893_52097002_52097672_52097778_52098070_52098176_52098287_52098393_52099352_52099665_52100339_52100448_52100561_52100664_52100842_52100942_52101493_52101599_52102501_52102814_52102918_52103024_52106263_52106369_52106893_52107098_52109106_52109414_52110159_52110268_52110905_52111011_52111651_52111856_52112748_52113061_52114525_52114634_52115580_52115686_52116454_52116659_52117255_52117568_52118509_52118618_52118759_52118865_52119967_52120172_52121978_52122291_52122932_52123041_52124278_52124384_52125491_52125696_52126863_52127176_52128203_52128312_52132007_52132113_52133204_52133409_52133853_52134166_52135292_52135401_52136771_52136877_52137167_52137372_52139214_52139527_52141718_52141827_52145543_52145649_52146101_52146306_52146592_52146905_52147573_52147682_52147767_52147873_52148099_52148304_52148604_52148917_52149230_52149339_52150505_52150611_52153507_52153712_52153897_52154210_52157705_52157814_52160219_52160325_52160982_52161190_52161310_52161623_52162871_52162980_52163896_52164002_52167369_52167577_52168785_52169098_52169643_52169752_52169855_52169961_52170447_52170655_52171475_52171788_52172601_52172710_52174261_52174367_52175966_52176174_52177055_52177368_52178782_52178891_52179637_52179743_52180765_52180973_52181053_52181366_52182624_52182733_52182812_52182918_52183639_52183739_52185302_52185411_52186250_52186449_52188630_52188745_52188820_52188929_52189488_52189594_52192453_52192553_52193642_52193748_52193838_52193947_52194041_52194144_52195105_52195220_52195295_52195404_52196540_52196646_52197697_52197797_52198287_52198393_52198496_52198605_52198693_52198803_52200540_52200658_52203129_52203238_52203787_52203893_52209645_52209751_52214974_52215080_52215708_52215814_52216681_52216787_52216947_52217056_52218729_52218931_52220820_52220863_52224457_52224523_52225045_52225128_52225692
ENSMUSG00000026950.19_27	chr2	-	22580	163	ISM	ENSMUSG00000026950.19	ENST00000427231.7	22666	164	644	7	18	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAAGACCTCCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	52225128	52027267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52040548_52040642_52040978_52041072_52041375_52041469_52043067_52043161_52043694_52043788_52044581_52044675_52046366_52046460_52047302_52047396_52047843_52047937_52049488_52049582_52050667_52050761_52051382_52051488_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533_52067639_52067980_52068086_52069473_52069579_52073284_52073393_52073743_52073849_52076023_52076129_52077422_52077528_52078694_52078800_52079610_52079716_52079865_52079971_52081937_52082043_52082481_52082587_52083181_52083287_52083887_52083999_52084391_52084491_52085431_52085537_52085631_52085737_52086303_52086412_52087808_52087914_52089415_52089524_52090637_52090743_52091409_52091515_52091825_52092024_52092520_52092635_52094237_52094346_52094635_52094741_52094838_52094944_52095633_52095739_52096077_52096276_52096676_52096791_52096893_52097002_52097672_52097778_52098070_52098176_52098287_52098393_52099352_52099665_52100339_52100448_52100561_52100664_52100842_52100942_52101493_52101599_52102501_52102814_52102918_52103024_52106263_52106369_52106893_52107098_52109106_52109414_52110159_52110268_52110905_52111011_52111651_52111856_52112748_52113061_52114525_52114634_52115580_52115686_52116454_52116659_52117255_52117568_52118509_52118618_52118759_52118865_52119967_52120172_52121978_52122291_52122932_52123041_52124278_52124384_52125491_52125696_52126863_52127176_52128203_52128312_52132007_52132113_52133204_52133409_52133853_52134166_52135292_52135401_52136771_52136877_52137167_52137372_52139214_52139527_52141718_52141827_52145543_52145649_52146101_52146306_52146592_52146905_52147573_52147682_52147767_52147873_52148099_52148304_52148604_52148917_52149230_52149339_52150505_52150611_52153507_52153712_52153897_52154210_52157705_52157814_52160219_52160325_52160982_52161190_52161310_52161623_52162871_52162980_52163896_52164002_52167369_52167577_52168785_52169098_52169643_52169752_52169855_52169961_52170447_52170655_52171475_52171788_52172601_52172710_52174261_52174367_52175966_52176174_52177055_52177368_52178782_52178891_52179637_52179743_52180765_52180973_52181053_52181366_52182624_52182733_52182812_52182918_52183639_52183739_52185302_52185411_52186250_52186449_52188630_52188745_52188820_52188929_52189488_52189594_52192453_52192553_52193642_52193748_52193838_52193947_52194041_52194144_52195105_52195220_52195295_52195404_52196540_52196646_52197697_52197797_52198287_52198393_52198496_52198605_52198693_52198803_52200540_52200658_52203129_52203238_52203787_52203893_52209645_52209751_52214974_52215080_52215708_52215814_52216681_52216787_52216947_52217056_52218729_52218931_52220820_52220863_52224457_52224523_52225045
ENSMUSG00000026950.19_3	chr2	-	23233	164	FSM	ENSMUSG00000026950.19	ENSMUST00000238288.2	23256	164	12	11	10	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAATAAACTGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	52225762	52026684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52027444_52037151_52037259_52037648_52037802_52038772_52038866_52039105_52039290_52039601_52039710_52040548_52040642_52040978_52041072_52041375_52041469_52043067_52043161_52043694_52043788_52044581_52044675_52046366_52046460_52047302_52047396_52047843_52047937_52049488_52049582_52050667_52050761_52051382_52051488_52052079_52052185_52052916_52053022_52053948_52054063_52054603_52054715_52055178_52055290_52057571_52057677_52059070_52059176_52059854_52059960_52060450_52060562_52065090_52065196_52065300_52065403_52065618_52065730_52066597_52066709_52066798_52066904_52067533_52067639_52067980_52068086_52069473_52069579_52073284_52073393_52073743_52073849_52076023_52076129_52077422_52077528_52078694_52078800_52079610_52079716_52079865_52079971_52081937_52082043_52082481_52082587_52083181_52083287_52083887_52083999_52084391_52084491_52085431_52085537_52085631_52085737_52086303_52086412_52087808_52087914_52089415_52089524_52090637_52090743_52091409_52091515_52091825_52092024_52092520_52092635_52094237_52094346_52094635_52094741_52094838_52094944_52095633_52095739_52096077_52096276_52096676_52096791_52096893_52097002_52097672_52097778_52098070_52098176_52098287_52098393_52099352_52099665_52100339_52100448_52100561_52100664_52100842_52100942_52101493_52101599_52102501_52102814_52102918_52103024_52106263_52106369_52106893_52107098_52109101_52109414_52110159_52110268_52110905_52111011_52111651_52111856_52112748_52113061_52114525_52114634_52115580_52115686_52116454_52116659_52117255_52117568_52118509_52118618_52118759_52118865_52119967_52120172_52121978_52122291_52122932_52123041_52124278_52124384_52125491_52125696_52126863_52127176_52128203_52128312_52132007_52132113_52133204_52133409_52133853_52134166_52135292_52135401_52136771_52136877_52137167_52137372_52139214_52139527_52141718_52141827_52145543_52145649_52146101_52146306_52146592_52146905_52147573_52147682_52147767_52147873_52148099_52148304_52148604_52148917_52149230_52149339_52150505_52150611_52153507_52153712_52153897_52154210_52157705_52157814_52160219_52160325_52160982_52161190_52161310_52161623_52162871_52162980_52163896_52164002_52167369_52167577_52168785_52169098_52169643_52169752_52169855_52169961_52170447_52170655_52171475_52171788_52172601_52172710_52174261_52174367_52175966_52176174_52177055_52177368_52178782_52178891_52179637_52179743_52180765_52180973_52181053_52181366_52182624_52182733_52182812_52182918_52183639_52183739_52185302_52185411_52186250_52186449_52188630_52188745_52188820_52188929_52189488_52189594_52192453_52192553_52193642_52193748_52193838_52193947_52194041_52194144_52195105_52195220_52195295_52195404_52196540_52196646_52197697_52197797_52198287_52198393_52198496_52198605_52198697_52198803_52200540_52200658_52203129_52203238_52203787_52203893_52209645_52209751_52214974_52215080_52215708_52215814_52216681_52216787_52216947_52217056_52218729_52218931_52220820_52220863_52224457_52224523_52225045_52225128_52225692
ENSMUSG00000026955.14_0	chr2	+	3107	7	FSM	ENSMUSG00000026955.14	ENSMUST00000028329.13	3121	7	14	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAGGCCCTATTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25262346	25268225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25263011_25263427_25263530_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUSG00000026955.14_5	chr2	+	1588	6	FSM	ENSMUSG00000026955.14	ENSMUST00000114293.9	1600	6	9	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25262350	25266812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979_25266088_25266175_25266287_25266363
ENSMUSG00000026955.14_6	chr2	+	1739	4	FSM	ENSMUSG00000026955.14	ENSMUST00000100323.3	1761	4	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGGCTGTATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	25262364	25266812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25263011_25264963_25265077_25265696_25265844_25265979
ENSMUSG00000026956.16_0	chr2	-	3330	9	FSM	ENSMUSG00000026956.16	ENSMUST00000102925.4	3349	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2982	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGGAAGGAGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	25255682	25249907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25251752_25252082_25252150_25252674_25252861_25253255_25253397_25253817_25254012_25254112_25254286_25254523_25254700_25254892_25255098_25255338
ENSMUSG00000026958.14_0	chr2	-	1668	13	FSM	ENSMUSG00000026958.14	ENSMUST00000028332.8	1682	13	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTAGTAGGATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	25246357	25242301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25242579_25242697_25242769_25243164_25243230_25243371_25243529_25243619_25243739_25244244_25244306_25244479_25244647_25244752_25244835_25244904_25245041_25245569_25245734_25245825_25245966_25246040_25246155_25246242
ENSMUSG00000026959.14_0	chr2	-	3802	19	FSM	ENSMUSG00000026959.14	ENSMUST00000114312.2	3838	19	30	6	30	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTTCCGGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25209169	25181198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25182141_25185803_25185950_25186036_25186147_25186559_25186722_25186888_25187047_25187159_25187309_25187381_25187495_25187607_25187727_25187799_25187965_25188197_25188326_25188405_25188548_25193737_25193822_25193918_25194064_25195049_25195225_25195296_25195419_25200386_25200488_25203439_25203617_25206766_25206902_25208640
ENSMUSG00000026960.7_0	chr2	+	2537	4	FSM	ENSMUSG00000026960.7	ENSMUST00000028336.7	2548	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTGTGTGTAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	53082106	53109228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_53082535_53084295_53084350_53092930_53093064_53107306
ENSMUSG00000026965.13_0	chr2	+	2992	13	FSM	ENSMUSG00000026965.13	ENSMUST00000028341.11	3004	13	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGTGGCATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25162501	25175927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25162690_25162926_25163550_25163811_25163945_25164677_25164853_25166327_25166448_25167647_25167766_25168335_25168518_25169183_25169326_25170138_25170215_25170294_25170499_25174573_25174704_25174948_25175185_25175262
ENSMUSG00000026966.7_0	chr2	-	846	3	FSM	ENSMUSG00000026966.7	ENSMUST00000028342.7	862	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCTGTGTCTGCTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	25162416	25161054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25161594_25161940_25162141_25162309
ENSMUSG00000026970.17_0	chr2	-	4419	14	FSM	ENSMUSG00000026970.17	ENSMUST00000028347.13	4436	14	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTCTTCTTCCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	60793527	60580544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60793034
ENSMUSG00000026970.17_8	chr2	-	2532	15	FSM	ENSMUSG00000026970.17	ENSMUST00000164147.8	2543	15	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGATGTTCTAGGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	60711782	60582307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60583327_60584073_60584159_60585759_60585841_60586779_60586891_60589147_60589199_60590102_60590151_60592396_60592491_60592613_60592664_60593579_60593687_60610074_60610155_60612204_60612363_60623032_60623125_60628027_60628087_60672640_60672817_60711461
ENSMUSG00000026971.16_2	chr2	-	2373	13	FSM	ENSMUSG00000026971.16	ENST00000428609.6	2387	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTATGTGGACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	60503999	60435488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60435651_60441710_60441831_60446988_60447084_60450554_60450778_60458091_60458510_60458678_60458814_60464923_60465014_60480317_60480414_60483485_60483648_60484982_60485149_60498631_60498879_60499445_60499651_60503745
ENSMUSG00000026971.16_3	chr2	-	2141	12	FSM	ENSMUSG00000026971.16	ENST00000409967.6	2156	12	9	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGGTATGTGGACTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	60504005	60435488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60435651_60441710_60441831_60458091_60458510_60458678_60458814_60464923_60465014_60480317_60480414_60483485_60483648_60484982_60485149_60498631_60498879_60499445_60499651_60502975_60503056_60503745
ENSMUSG00000026972.16_0	chr2	-	1644	8	FSM	ENSMUSG00000026972.16	ENSMUST00000028349.14	1666	8	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24825245	24815366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24815689_24815767_24816207_24816283_24816461_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUSG00000026972.16_2	chr2	-	1567	8	FSM	ENSMUSG00000026972.16	ENSMUST00000102935.10	1574	8	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGGGCGAGTGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24825171	24815366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24815689_24815767_24816207_24816283_24816458_24816556_24816740_24816889_24817045_24817137_24817189_24817740_24817852_24825039
ENSMUSG00000026974.12_0	chr2	+	3893	6	FSM	ENSMUSG00000026974.12	ENSMUST00000028350.9	3903	6	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTATTTTTAGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	24839806	24852080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24840060_24841484_24841545_24842597_24842705_24843247_24843389_24848047_24848229_24848929
ENSMUSG00000026975.11_0	chr2	+	1643	9	FSM	ENSMUSG00000026975.11	ENSMUST00000028351.9	1666	9	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGTAATTATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	24852424	24862165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24852638_24853034_24853169_24853467_24853556_24855571_24855667_24856513_24856687_24858896_24858967_24859061_24859128_24859517_24859691_24861534
ENSMUSG00000026976.16_0	chr2	-	2537	12	FSM	ENSMUSG00000026976.16	ENSMUST00000028355.11	2560	12	23	0	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTTTATCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	24365588	24310571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24311637_24312980_24313068_24319538_24319641_24325774_24325982_24326459_24326581_24330651_24330828_24331089_24331216_24331603_24331693_24332951_24333150_24334577_24334744_24365084_24365193_24365496
ENSMUSG00000026976.16_1	chr2	-	1672	11	FSM	ENSMUSG00000026976.16	ENST00000681162.1	1683	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAGAGAAAAGGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24365129	24311262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24311618_24312980_24313068_24319538_24319641_24325774_24325982_24326459_24326581_24330651_24330828_24331089_24331216_24331603_24331693_24332951_24333150_24334577_24334744_24365084
ENSMUSG00000026976.16_2	chr2	-	1613	10	ISM	ENSMUSG00000026976.16	ENST00000681162.1	1683	11	30397	14	30397	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAGGAGAGAAAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	24334732	24311265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24311618_24312980_24313068_24319538_24319641_24325774_24325982_24326459_24326581_24330651_24330828_24331089_24331216_24331603_24331693_24332951_24333150_24334577
ENSMUSG00000026977.18_0	chr2	+	3577	10	FSM	ENSMUSG00000026977.18	ENSMUST00000102748.11	3594	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTTTGAACTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	60040241	60079549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_60040429_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUSG00000026977.18_6	chr2	+	2233	10	FSM	ENSMUSG00000026977.18	ENSMUST00000067542.15	2244	10	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60055119	60078297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_60055215_60059261_60059427_60060027_60060224_60062543_60062712_60064242_60065342_60067097_60067271_60071286_60071397_60073900_60074015_60075555_60075605_60078233
ENSMUSG00000026980.16_0	chr2	-	6886	35	FSM	ENSMUSG00000026980.16	ENSMUST00000112533.8	6901	35	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTAATCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	60213638	60122452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60124283_60129390_60129559_60131298_60131422_60133921_60134072_60136673_60136843_60138482_60138710_60141952_60142148_60144500_60144618_60146432_60146601_60148651_60148818_60152041_60152269_60154162_60154293_60158130_60158292_60158733_60158840_60160319_60160460_60161069_60161153_60161420_60161489_60162662_60162839_60163268_60163301_60164789_60164909_60168638_60168708_60170496_60170579_60178696_60178840_60180201_60180402_60182399_60182570_60182697_60182787_60183265_60183377_60184748_60184907_60185712_60185905_60187620_60187762_60188811_60188923_60195354_60195520_60199102_60199274_60206201_60206574_60213481
ENSMUSG00000026981.16_0	chr2	+	2455	5	FSM	ENSMUSG00000026981.16	ENSMUST00000114487.9	2474	5	11	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATCTACCACTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	24226875	24241498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24227005_24235531_24235584_24237477_24237567_24238527_24238641_24239426
ENSMUSG00000026987.17_0	chr2	-	7872	35	FSM	ENSMUSG00000026987.17	ENSMUST00000112550.8	7895	35	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTAACATTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	59956027	59729715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386_59836534_59955806
ENSMUSG00000026987.17_14	chr2	-	7575	34	FSM	ENSMUSG00000026987.17	ENSMUST00000090925.13	7576	34	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCACATAGATCAGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	59836530	59729788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59731147_59731818_59731963_59732069_59732336_59733502_59733650_59737259_59737396_59737782_59738094_59742025_59742187_59742745_59742902_59743072_59743350_59743883_59744540_59747697_59747843_59748782_59748846_59750638_59750883_59752486_59752562_59753884_59754100_59755004_59755260_59756363_59756505_59762448_59762515_59764014_59764060_59765558_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787973_59788083_59788775_59788837_59790164_59790450_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809052_59831849_59831901_59836386
ENSMUSG00000026987.17_18	chr2	-	2349	14	FSM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCCGAGAAACGAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	59814174	59765578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787618_59787711_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886_59809046_59814125
ENSMUSG00000026987.17_20	chr2	-	2283	13	ISM	ENSMUSG00000026987.17	ENST00000343439.9	2355	14	5146	6	5146	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCCGAGAAACGAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	59809028	59765578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_59765625_59767029_59767096_59773105_59773168_59773281_59773375_59778430_59778642_59787618_59787711_59787973_59788083_59788775_59788837_59792364_59792975_59798970_59799367_59799561_59799763_59807702_59807897_59808886
ENSMUSG00000026988.16_0	chr2	-	2054	11	FSM	ENSMUSG00000026988.16	ENSMUST00000028368.14	2072	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAATTGCAATGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	59712918	59682715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59683306_59688953_59689095_59691904_59692082_59692963_59693071_59693160_59693202_59694645_59694680_59703559_59703654_59704582_59704673_59707010_59707196_59708473_59708895_59712744
ENSMUSG00000026988.16_10	chr2	-	1245	7	FSM	ENSMUSG00000026988.16	ENST00000392796.7	1264	7	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGGTATGTGTGCGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	59708861	59688958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59689095_59691904_59692085_59692963_59693110_59703533_59703654_59704582_59704673_59707010_59707196_59708473
ENSMUSG00000026988.16_25	chr2	-	1098	6	FSM	ENSMUSG00000026988.16	ENST00000409124.1	1121	6	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAATCGGTAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	59708862	59691916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_59692085_59692963_59693110_59703533_59703654_59704582_59704673_59707010_59707196_59708473
ENSMUSG00000026991.21_0	chr2	+	152	2	FSM	ENSMUSG00000026991.21	ENST00000629219.1	162	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGGCATGGAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59045032	59045303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_59045159_59045277
ENSMUSG00000026991.21_14	chr2	+	2095	13	ISM	ENSMUSG00000026991.21	ENSMUST00000168631.8	4484	21	150855	755	9	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGACGGCTGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59142048	59184793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_59142258_59148855_59148989_59152845_59153060_59165091_59165276_59167927_59168046_59169062_59169255_59169424_59169599_59172436_59172588_59175141_59175338_59178063_59178149_59178267_59178386_59182605_59182680_59184546
ENSMUSG00000026991.21_2	chr2	+	131	1	NIC	ENSMUSG00000026991.21	novel	4484	21	NA	NA	3	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	462	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCTTTCATTGACGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59045029	59045160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_59045000_59045200
ENSMUSG00000026999.15_0	chr2	+	1543	9	FSM	ENSMUSG00000026999.15	ENSMUST00000028382.13	1559	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCTAAACATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80469169	80489240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80469277_80472968_80473140_80474495_80474624_80476752_80476808_80483197_80483340_80485136_80485207_80486292_80486422_80487532_80487698_80488664
ENSMUSG00000027001.11_0	chr2	+	1629	4	FSM	ENSMUSG00000027001.11	ENSMUST00000028384.5	1632	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCTTCAAGTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	80447391	80462005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80447951_80451537_80451585_80454551_80454705_80461135
ENSMUSG00000027001.11_3	chr2	+	449	3	FSM	ENSMUSG00000027001.11	ENST00000342619.10	474	3	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAATGGAGGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	80447735	80461322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80447951_80451537_80451585_80461135
ENSMUSG00000027002.14_0	chr2	-	4456	31	FSM	ENSMUSG00000027002.14	ENSMUST00000028386.12	4469	31	5	8	5	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGAATGATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	80411603	80330863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80411201
ENSMUSG00000027002.14_2	chr2	-	4560	32	FSM	ENSMUSG00000027002.14	ENSMUST00000111760.3	4597	32	30	7	30	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACCTTGAATGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	80411694	80330868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_80331756_80332568_80332659_80336516_80336627_80337164_80337282_80339055_80339150_80343020_80343102_80343457_80343541_80348238_80348333_80349902_80350001_80350182_80350314_80350715_80350935_80353719_80353852_80354881_80355022_80355902_80356023_80358878_80359012_80360501_80360648_80363988_80364048_80365817_80365900_80368447_80368581_80370462_80370570_80370853_80370951_80371806_80371864_80375333_80375491_80378244_80378294_80379173_80379312_80383480_80383572_80383650_80383794_80384545_80384603_80385041_80385135_80400462_80400574_80401556_80401575_80411201
ENSMUSG00000027006.14_0	chr2	+	4033	23	FSM	ENSMUSG00000027006.14	ENSMUST00000028392.8	4042	23	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTCTTTTGAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	80145818	80184387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80146150_80147592_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612_80179733_80180972_80181078_80183202
ENSMUSG00000027006.14_16	chr2	+	2228	19	FSM	ENSMUSG00000027006.14	ENST00000616986.5	2247	19	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCAAAGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	80147627	80179721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80163272_80163363_80164069_80164184_80165796_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612
ENSMUSG00000027006.14_23	chr2	+	2304	20	FSM	ENSMUSG00000027006.14	ENST00000680258.1	2325	20	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCAAAGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	80147629	80179721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80147944_80149503_80149667_80151587_80151639_80155003_80155087_80155338_80155471_80155961_80156056_80157001_80157080_80158415_80158460_80161612_80161751_80163272_80163363_80164069_80164184_80165856_80165912_80170816_80170945_80171155_80171273_80174260_80174363_80175267_80175424_80176855_80176990_80177687_80177742_80177991_80178140_80179612
ENSMUSG00000027007.17_0	chr2	+	5150	18	FSM	ENSMUSG00000027007.17	ENSMUST00000111785.9	5168	18	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTAAATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79465709	79503306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_79466089_79466376_79466423_79469600_79469651_79470489_79470547_79472305_79472346_79472434_79472534_79473747_79473957_79474748_79475453_79481731_79481805_79485430_79485520_79487490_79488694_79490576_79490655_79490736_79490865_79491197_79491349_79491982_79492049_79492652_79493109_79501073_79501192_79502102
ENSMUSG00000027009.19_0	chr2	+	9731	28	FSM	ENSMUSG00000027009.19	ENSMUST00000099972.5	9767	28	25	11	25	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGCAAACTGTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	79085868	79163456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_79086201_79086521_79086644_79103131_79103239_79103336_79103467_79108105_79108174_79109426_79109557_79110917_79111004_79111837_79111901_79111989_79112128_79115083_79115196_79117348_79117444_79118550_79118642_79119165_79119212_79119580_79119736_79122328_79122484_79131328_79131479_79133626_79133704_79144036_79144188_79145258_79145355_79145968_79146049_79146318_79146409_79148446_79148538_79150825_79150934_79151736_79151863_79152978_79153099_79155410_79155510_79155918_79156039_79156863
ENSMUSG00000027010.17_0	chr2	-	6334	18	FSM	ENSMUSG00000027010.17	ENSMUST00000151937.8	6351	18	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAGGAGTCGTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	71198082	71101412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_71105698_71106775_71106867_71106984_71107144_71109859_71109999_71112813_71112955_71123703_71123785_71124015_71124069_71127008_71127168_71128913_71128996_71138399_71138485_71141806_71141901_71142768_71142908_71145326_71145474_71154319_71154460_71163948_71164065_71174233_71174377_71196870_71196925_71197856
ENSMUSG00000027011.15_0	chr2	+	1525	6	FSM	ENSMUSG00000027011.15	ENST00000410062.9	1540	6	9	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATAGTTTCTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78699395	78750921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_78699750_78700803_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_10	chr2	+	1521	6	FSM	ENSMUSG00000027011.15	ENST00000602710.5	1536	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAAAGTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78699914	78750939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_78700244_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_2	chr2	+	2236	6	FSM	ENSMUSG00000027011.15	ENSMUST00000028398.14	2249	6	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCTTTTCCGGTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	78699396	78751630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_78699750_78700800_78701023_78702765_78702817_78744017_78744151_78749030_78749179_78750301
ENSMUSG00000027011.15_5	chr2	+	427	3	FSM	ENSMUSG00000027011.15	ENST00000602475.5	437	3	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAAGAAACAAATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78699590	78702814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_78699750_78700803_78701023_78702765
ENSMUSG00000027012.16_15	chr2	+	2616	16	FSM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	12	3	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTCACTTTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	71042189	71093644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71042419_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_2	chr2	+	2462	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112139.8	2483	16	12	9	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTAACTTCTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	71042096	71093629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092994
ENSMUSG00000027012.16_29	chr2	+	2371	15	ISM	ENSMUSG00000027012.16	ENSMUST00000081710.12	2631	16	2602	22	2444	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGCTAACTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	71044779	71093625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027012.16_7	chr2	+	2453	16	FSM	ENSMUSG00000027012.16	ENSMUST00000112138.8	2466	16	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATATGCTAACTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	71042104	71093625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71042190_71044782_71044900_71049644_71049763_71058943_71059035_71066258_71066375_71077032_71077129_71077356_71077520_71077632_71077733_71078164_71078291_71079130_71079278_71079652_71079767_71080062_71080197_71081185_71081331_71088427_71088569_71091165_71091292_71092991
ENSMUSG00000027014.15_0	chr2	-	3368	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111821.9	3388	20	17	3	17	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCAGTGAGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	77776680	77725999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ENSMUSG00000027014.15_1	chr2	-	3459	21	FSM	ENSMUSG00000027014.15	ENSMUST00000065889.10	3471	21	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCAGTGAGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	77776710	77725999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77726923_77734139_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77770645_77770707_77776493
ENSMUSG00000027014.15_10	chr2	-	3241	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111818.8	3255	20	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCATTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77776687	77726115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763108_77766936_77767067_77776493
ENSMUSG00000027014.15_11	chr2	-	3038	19	ISM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	9473	6	9470	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCATTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77767054	77726115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936
ENSMUSG00000027014.15_9	chr2	-	3084	20	FSM	ENSMUSG00000027014.15	ENSMUST00000111819.8	3090	20	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATCATTGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77776527	77726115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77726923_77734157_77734379_77734467_77734570_77735700_77735829_77737425_77737579_77738411_77738490_77741853_77741915_77745840_77745923_77747399_77747508_77751161_77751225_77751310_77751518_77751753_77751890_77754483_77754538_77754830_77755000_77757551_77757681_77759599_77759843_77761778_77761890_77763042_77763111_77766936_77767067_77776493
ENSMUSG00000027018.12_0	chr2	+	1880	11	FSM	ENSMUSG00000027018.12	ENSMUST00000112122.9	1899	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACACTAAAACTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71219312	71271958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264377_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_2	chr2	+	1568	11	FSM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACACTAAAACTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71219603	71271958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71219649_71220246_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027018.12_9	chr2	+	1512	10	ISM	ENSMUSG00000027018.12	ENSMUST00000028408.3	1576	11	654	8	654	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTACACTAAAACTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71220257	71271958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_71220343_71239331_71239408_71240486_71240608_71250518_71250699_71250933_71251056_71251554_71251660_71251976_71252084_71264398_71264551_71269039_71269157_71271511
ENSMUSG00000027030.16_0	chr2	-	3522	18	FSM	ENSMUSG00000027030.16	ENSMUST00000102715.4	3536	18	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGCACTCGAGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	68302606	68040796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_68042338_68051247_68051313_68093578_68093648_68097382_68097436_68137384_68137453_68139335_68139399_68144707_68144738_68144824_68144948_68189157_68189224_68189329_68189379_68196417_68196552_68198740_68198843_68199339_68199450_68221257_68221314_68222454_68222597_68228767_68228877_68240372_68240486_68301977
ENSMUSG00000027035.11_0	chr2	+	7015	10	FSM	ENSMUSG00000027035.11	ENSMUST00000028426.9	7038	10	10	13	10	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTAAGAGTACAGCATG	NA	NA	NA	NA	NA	NA	NA	NA	68691794	68944613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_68692150_68764858_68764965_68777570_68777702_68833090_68833149_68877488_68877540_68881123_68881217_68898972_68899102_68901675_68901783_68935346_68935504_68938785
ENSMUSG00000027048.16_1	chr2	-	3958	27	FSM	ENSMUSG00000027048.16	ENST00000650372.1	3966	27	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGACTGGAGACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69159688	69069428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69069629_69073758_69073906_69076088_69076296_69079057_69079256_69087550_69087708_69089826_69090069_69091706_69091911_69095728_69095891_69095981_69096087_69104341_69104504_69108114_69108215_69112934_69112999_69114933_69115136_69115553_69115725_69117008_69117213_69117942_69118069_69119709_69119821_69122284_69122399_69126655_69126831_69130146_69130272_69134280_69134453_69136848_69136983_69138802_69138891_69154175_69154415_69155487_69155540_69158320_69158343_69159613
ENSMUSG00000027048.16_8	chr2	-	3883	26	ISM	ENSMUSG00000027048.16	ENST00000650372.1	3966	27	1350	4	1350	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGACTGGAGACCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	69158342	69069428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_69069629_69073758_69073906_69076088_69076296_69079057_69079256_69087550_69087708_69089826_69090069_69091706_69091911_69095728_69095891_69095981_69096087_69104341_69104504_69108114_69108215_69112934_69112999_69114933_69115136_69115553_69115725_69117008_69117213_69117942_69118069_69119709_69119821_69122284_69122399_69126655_69126831_69130146_69130272_69134280_69134453_69136848_69136983_69138802_69138891_69154175_69154415_69155487_69155540_69158320
ENSMUSG00000027067.17_0	chr2	+	2718	17	FSM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84867797	84877450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84867875_84868137_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027067.17_10	chr2	+	2643	16	ISM	ENSMUSG00000027067.17	ENSMUST00000168266.8	2721	17	341	0	341	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATGTCCTTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84868135	84877450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_84868314_84868696_84868883_84870217_84870324_84870608_84870800_84870902_84871134_84871262_84871367_84871451_84871581_84871778_84872001_84872586_84872660_84873036_84873176_84873299_84873346_84874662_84874793_84875753_84875925_84876027_84876117_84876596_84876784_84876989
ENSMUSG00000027068.7_0	chr2	+	4250	5	FSM	ENSMUSG00000027068.7	ENSMUST00000063690.4	4281	5	27	4	27	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTATCGTGGTCCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	69210815	69234873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69210976_69223195_69223567_69224626_69224886_69227959_69228124_69231577
ENSMUSG00000027070.15_0	chr2	-	15303	79	NIC	ENSMUSG00000027070.15	novel	15460	79	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGATGGCTTTTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69416283	69254686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_69256148_69256314_69256387_69258936_69259045_69260606_69260709_69261418_69261549_69262260_69262379_69262526_69262595_69263345_69263437_69265346_69265467_69266911_69267089_69267766_69267988_69268685_69268815_69270115_69270282_69271629_69271774_69273089_69273222_69274023_69274156_69278458_69278588_69281605_69281729_69284135_69284274_69285153_69285271_69285803_69285921_69287166_69287287_69288715_69288845_69289817_69290064_69290684_69290882_69291600_69291779_69294917_69295142_69295932_69296104_69296548_69296702_69297108_69297626_69299716_69300013_69302689_69302892_69305723_69305856_69307353_69307477_69308915_69309042_69309442_69309686_69310359_69310564_69311468_69311759_69312568_69312728_69313040_69313207_69313336_69314258_69316507_69316697_69318166_69318407_69319478_69319693_69322098_69322277_69322695_69322806_69326014_69326159_69326672_69326840_69329535_69329665_69330953_69331132_69331830_69332060_69332821_69333007_69333730_69333943_69335424_69335674_69336722_69337101_69338108_69338226_69338311_69338432_69339476_69339723_69340686_69340969_69341273_69341412_69343590_69343722_69344480_69344607_69346734_69346928_69348652_69348857_69350257_69350399_69352062_69352266_69353489_69353697_69354264_69354489_69355504_69355675_69357859_69357989_69363796_69363917_69365252_69365403_69366328_69366446_69367858_69367973_69368294_69368406_69379283_69379401_69381173_69381290_69382696_69382805_69416158
ENSMUSG00000027074.15_2	chr2	+	2569	13	FSM	ENSMUSG00000027074.15	ENSMUST00000090726.6	2583	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAACTACTGCTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	84767014	84788846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84767194_84767866_84768214_84768566_84768697_84771324_84771372_84774585_84774663_84774861_84774955_84777183_84777324_84778678_84778777_84780316_84780536_84780764_84780885_84785774_84785962_84786615_84786731_84788029
ENSMUSG00000027075.17_0	chr2	+	3034	15	FSM	ENSMUSG00000027075.17	ENSMUST00000121114.8	3089	15	50	5	50	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAAATCTGGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84669243	84693917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84670026_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027075.17_1	chr2	+	2533	15	FSM	ENSMUSG00000027075.17	ENSMUST00000111624.8	2556	15	7	16	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGGAAATGAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	84670549	84693909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84670839_84671182_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027075.17_3	chr2	+	2482	14	FSM	ENSMUSG00000027075.17	ENSMUST00000111625.2	2487	14	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGTGACTGGAGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	84670973	84693938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84671350_84680009_84680188_84680295_84680352_84680459_84680537_84683011_84683105_84684755_84684890_84685814_84685994_84687100_84687248_84687404_84687441_84687627_84687782_84690032_84690175_84690433_84690508_84691719_84691844_84693226
ENSMUSG00000027076.11_0	chr2	+	672	3	FSM	ENSMUSG00000027076.11	ENSMUST00000028470.10	690	3	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCAGTGTCTTTACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	84657356	84660555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84657492_84657942_84658058_84660133
ENSMUSG00000027078.15_0	chr2	+	1546	4	FSM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCACCCAGAAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	84629179	84640514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84629277_84633122_84633219_84636680_84636868_84639348
ENSMUSG00000027078.15_2	chr2	+	1449	3	ISM	ENSMUSG00000027078.15	ENSMUST00000102642.9	1560	4	3951	6	3951	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCCACCCAGAAGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	84633122	84640514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_84633219_84636680_84636868_84639348
ENSMUSG00000027079.16_0	chr2	-	2563	4	FSM	ENSMUSG00000027079.16	ENSMUST00000165219.8	2564	4	1	0	1	0	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATAATTCACATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	84557585	84552447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84553097_84553354_84554562_84555872_84556501_84557506
ENSMUSG00000027079.16_10	chr2	-	1118	2	FSM	ENSMUSG00000027079.16	ENST00000302731.4	1132	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGAATGGACTATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	84556455	84553834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84554562_84556064
ENSMUSG00000027079.16_6	chr2	-	1898	3	FSM	ENSMUSG00000027079.16	ENSMUST00000028475.9	1912	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGTTGGTATGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	84557686	84553471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84554562_84555872_84556501_84557506
ENSMUSG00000027080.7_0	chr2	+	2049	5	FSM	ENSMUSG00000027080.7	ENSMUST00000102645.4	2059	5	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGGCTGGAGTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	84508754	84518558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84509006_84515534_84515792_84515946_84516044_84516534_84516630_84517209
ENSMUSG00000027080.7_1	chr2	+	1411	5	FSM	ENSMUSG00000027080.7	ENST00000337672.9	1442	5	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGATCCTAGGACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84508813	84517526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84509006_84515534_84515792_84515946_84516297_84516485_84516666_84517094
ENSMUSG00000027082.16_0	chr2	-	2019	10	FSM	ENSMUSG00000027082.16	ENSMUST00000111718.8	2027	10	3	5	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCATGTTGACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84305621	84263203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286_84304530_84305105
ENSMUSG00000027082.16_1	chr2	-	1462	9	FSM	ENSMUSG00000027082.16	ENSMUST00000028487.10	1492	9	24	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGAGCAATCATGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	84304494	84263209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84263529_84264585_84264766_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84304286
ENSMUSG00000027082.16_3	chr2	-	3958	8	FSM	ENSMUSG00000027082.16	ENSMUST00000111711.8	3968	8	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCATCTTGCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	84307091	84270492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84273657_84274353_84274465_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ENSMUSG00000027082.16_4	chr2	-	3898	7	ISM	ENSMUSG00000027082.16	ENSMUST00000111711.8	3968	8	2952	9	7	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCATCTTGCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	84304140	84270492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_84273657_84274353_84274465_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042
ENSMUSG00000027082.16_5	chr2	-	3605	8	FSM	ENSMUSG00000027082.16	ENSMUST00000111714.8	3614	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTGCTTAAATCTATT	NA	NA	NA	NA	NA	NA	NA	NA	84307101	84270486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307034
ENSMUSG00000027082.16_6	chr2	-	3525	7	FSM	ENSMUSG00000027082.16	ENSMUST00000111717.4	2962	7	12	-575	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCATCTTGCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	84304135	84270491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042
ENSMUSG00000027082.16_7	chr2	-	3575	8	FSM	ENSMUSG00000027082.16	ENSMUST00000090732.10	3576	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCTTAAATCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	84307119	84270484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84273270_84274353_84274483_84275083_84275261_84282900_84282940_84284143_84284342_84288366_84288478_84304042_84304144_84307084
ENSMUSG00000027086.17_0	chr2	-	2830	14	FSM	ENSMUSG00000027086.17	ENSMUST00000073152.13	2865	14	14	21	14	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTTTAAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	69542936	69517179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69517485_69520406_69520522_69521578_69521709_69524212_69524327_69524859_69524992_69527186_69527316_69530467_69530583_69532706_69533194_69534596_69534729_69535765_69535877_69537651_69538051_69538854_69538981_69541837_69541907_69542470
ENSMUSG00000027087.12_0	chr2	+	7032	30	FSM	ENSMUSG00000027087.12	ENSMUST00000028499.11	7054	30	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	83554759	83637257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83592211_83592274_83593995_83594042_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ENSMUSG00000027087.12_4	chr2	+	6772	28	FSM	ENSMUSG00000027087.12	ENSMUST00000111740.9	6788	28	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTGTGTGGATTCTA	NA	NA	NA	NA	NA	NA	NA	NA	83554911	83637257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_83555264_83566853_83566985_83578196_83578289_83586149_83586265_83596111_83596238_83596970_83597016_83598638_83598683_83599035_83599093_83600396_83600450_83601478_83601682_83606711_83606904_83609357_83609404_83612282_83612391_83614148_83614208_83615676_83615832_83619260_83619399_83621538_83621607_83622236_83622385_83622894_83622988_83624577_83624658_83625262_83625344_83625782_83625889_83626429_83626589_83627694_83627797_83632113_83632228_83632321_83632430_83633223_83633347_83633583
ENSMUSG00000027088.11_0	chr2	+	2241	4	FSM	ENSMUSG00000027088.11	ENSMUST00000028494.9	2260	4	12	7	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATATGTCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	69619991	69627560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69620301_69620629_69620666_69622680_69622836_69625819
ENSMUSG00000027091.15_0	chr2	+	2093	10	FSM	ENSMUSG00000027091.15	ENSMUST00000081591.7	2111	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTATGGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	83474788	83494958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_83475072_83483701_83483804_83487359_83487472_83488352_83488506_83488873_83488966_83490401_83490585_83491490_83491638_83491776_83491879_83492492_83492617_83494163
ENSMUSG00000027099.10_0	chr2	+	2942	10	FSM	ENSMUSG00000027099.10	ENSMUST00000028511.8	2950	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATCGTAGAAAATAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	74656154	74708775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_74656388_74677581_74677630_74678642_74678690_74689748_74689822_74697214_74697292_74698663_74698757_74699226_74699266_74699647_74699774_74700751_74700829_74706646
ENSMUSG00000027102.5_0	chr2	+	1585	3	FSM	ENSMUSG00000027102.5	ENST00000429017.2	1598	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAAACAGCCGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74535222	74538220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_74535297_74536314_74536463_74536857
ENSMUSG00000027102.5_12	chr2	+	1511	2	FSM	ENSMUSG00000027102.5	ENSMUST00000019749.4	2634	2	1066	57	819	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAAACAGCCGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	74536314	74538220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_74536463_74536857
ENSMUSG00000027104.19_0	chr2	-	3928	12	FSM	ENSMUSG00000027104.19	ENSMUST00000112016.9	3943	12	6	9	-2	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTATAATTTGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	73722977	73646861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUSG00000027104.19_25	chr2	-	784	6	FSM	ENSMUSG00000027104.19	ENST00000409499.5	799	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTTTTTTTTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	73722929	73649168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73649493_73653544_73653651_73693512_73693583_73704013_73704090_73710628_73710726_73722818
ENSMUSG00000027104.19_5	chr2	-	4189	14	FSM	ENSMUSG00000027104.19	ENSMUST00000055833.12	4210	14	17	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTGCTTGTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	73722941	73646856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73675782_73675898_73676540_73676720_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73704013_73704090_73710628_73710724_73722818
ENSMUSG00000027104.19_8	chr2	-	3716	11	FSM	ENSMUSG00000027104.19	ENST00000409437.5	3724	11	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAATTATGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	73704082	73646873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966_73701030_73704013
ENSMUSG00000027104.19_9	chr2	-	3645	10	ISM	ENSMUSG00000027104.19	ENST00000409437.5	3724	11	3057	6	3057	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAATTATGTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	73701027	73646873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73649493_73653544_73653651_73658815_73659023_73660135_73660286_73672703_73672791_73680932_73681062_73681207_73681327_73684138_73684236_73693512_73693583_73700966
ENSMUSG00000027107.4_0	chr2	-	4380	9	FSM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGTGTGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73410676	73393558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73396652_73397045_73397286_73398435_73398660_73400750_73400989_73401756_73401953_73403603_73403714_73404664_73404710_73404829_73404976_73410588
ENSMUSG00000027107.4_1	chr2	-	4293	8	ISM	ENSMUSG00000027107.4	ENSMUST00000028515.4	4386	9	5706	0	5706	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGTGTGTTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73404976	73393558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73396652_73397045_73397286_73398435_73398660_73400750_73400989_73401756_73401953_73403603_73403714_73404664_73404710_73404829
ENSMUSG00000027108.16_0	chr2	-	2156	11	FSM	ENSMUSG00000027108.16	ENSMUST00000028517.13	2175	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGACCATTTCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	73044781	72923153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_72924069_72927488_72927612_72929635_72929733_72930417_72930559_72972241_72972340_72972651_72972733_72987081_72987258_73029744_73029873_73033668_73033813_73043203_73043305_73044629
ENSMUSG00000027109.17_0	chr2	-	4165	7	FSM	ENSMUSG00000027109.17	ENSMUST00000102689.10	4181	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAGCTTGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72810782	72766778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809241_72809374_72809830_72809977_72810593
ENSMUSG00000027109.17_2	chr2	-	3796	6	FSM	ENSMUSG00000027109.17	ENSMUST00000066003.7	3808	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTGTTGTAGTCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	72810758	72766991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_72768727_72770886_72771084_72776889_72777083_72800498_72801859_72809830_72809977_72810593
ENSMUSG00000027111.17_0	chr2	+	4299	26	FSM	ENSMUSG00000027111.17	ENSMUST00000028522.10	4310	26	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTGCAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71617327	71687097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71617665_71646973_71647099_71648824_71648905_71650342_71650599_71652781_71652914_71655852_71656064_71656733_71656928_71657066_71657156_71658239_71658359_71664039_71664139_71664352_71664415_71668611_71668773_71668921_71669066_71670905_71671022_71671129_71671320_71671410_71671495_71671592_71671673_71671822_71671901_71671987_71672091_71673472_71673647_71676126_71676226_71676316_71676428_71676507_71676607_71679724_71679851_71683877_71684008_71686197
ENSMUSG00000027115.15_0	chr2	+	3347	17	FSM	ENSMUSG00000027115.15	ENSMUST00000028527.8	3369	17	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTTAAACAGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	109111094	109172082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109111239_109118141_109118512_109120023_109120182_109122409_109122515_109123315_109123427_109125283_109125482_109126964_109127142_109128419_109128495_109128681_109128795_109133147_109133311_109137194_109137360_109140891_109141014_109148219_109148456_109163600_109164013_109164665_109164774_109168911_109169022_109171502
ENSMUSG00000027122.16_0	chr2	-	3314	5	FSM	ENSMUSG00000027122.16	ENSMUST00000028536.13	3337	5	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATAATAATGCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	106804757	106792882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_106795216_106795766_106795992_106797444_106797573_106799416_106799904_106804616
ENSMUSG00000027130.16_0	chr2	+	3546	24	FSM	ENSMUSG00000027130.16	ENST00000397707.6	3566	24	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATAATCAGCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	112097020	112190844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112097438_112163727_112163823_112164713_112164846_112166120_112166268_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUSG00000027130.16_13	chr2	+	3027	23	FSM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATAATCAGCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	112146585	112190844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112146631_112163727_112163823_112164713_112164846_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUSG00000027130.16_26	chr2	+	2974	22	ISM	ENSMUSG00000027130.16	ENST00000560164.5	3035	23	17150	8	17150	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATAATCAGCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	112163735	112190844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_112163823_112164713_112164846_112167702_112167758_112168203_112168335_112169590_112169833_112172175_112172391_112174173_112174333_112174483_112174583_112174832_112174891_112177243_112177419_112177661_112177781_112179620_112179720_112181623_112181744_112182788_112182894_112183236_112183406_112184518_112184715_112185319_112185490_112186804_112186937_112187828_112187937_112188112_112188298_112188850_112188985_112190760
ENSMUSG00000027131.4_0	chr2	-	968	5	FSM	ENSMUSG00000027131.4	ENSMUST00000028551.4	983	5	10	5	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCACAAGTTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112198362	112193360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112193700_112194136_112194298_112194496_112194651_112197746_112197862_112198163
ENSMUSG00000027131.4_2	chr2	-	676	4	FSM	ENSMUSG00000027131.4	ENST00000249209.8	690	4	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACAATGCTTAATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	112198243	112193372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112193700_112194496_112194651_112197746_112197862_112198163
ENSMUSG00000027131.4_4	chr2	-	153	2	FSM	ENSMUSG00000027131.4	ENST00000559421.1	166	2	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGCACCATGCATATGG	NA	NA	NA	NA	NA	NA	NA	NA	112197858	112193658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112193700_112197746
ENSMUSG00000027131.4_6	chr2	-	515	2	FSM	ENSMUSG00000027131.4	ENST00000557879.1	529	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTATGGTTAAAGTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	112197854	112194138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112194518_112197718
ENSMUSG00000027132.4_0	chr2	+	2867	10	FSM	ENSMUSG00000027132.4	ENSMUST00000028552.4	2886	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCAAAGAATGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112209566	112244577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112209703_112234505_112234622_112235102_112235144_112236418_112236699_112237930_112238050_112238727_112238779_112238868_112238959_112239485_112239576_112240487_112240582_112242727
ENSMUSG00000027133.4_0	chr2	+	1090	2	FSM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAATCTGTCTGGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	112092283	112093608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112092423_112092657
ENSMUSG00000027133.4_1	chr2	+	136	2	FSM	ENSMUSG00000027133.4	ENST00000557912.1	140	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTCGTTAATCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	112092368	112092797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112092423_112092715
ENSMUSG00000027133.4_2	chr2	+	84	1	ISM	ENSMUSG00000027133.4	ENSMUST00000028553.4	1109	2	443	817	345	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTCGTTAATCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	112092713	112092797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_112092700_112092800
ENSMUSG00000027134.5_0	chr2	+	2257	14	FSM	ENSMUSG00000027134.5	ENSMUST00000028554.4	2275	14	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGGTCCAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	112069823	112077449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112070403_112071795_112071939_112072269_112072491_112072820_112072934_112073045_112073107_112073348_112073408_112073603_112073639_112074185_112074241_112074327_112074411_112074664_112074791_112075007_112075141_112076140_112076240_112076619_112076777_112077056
ENSMUSG00000027160.17_0	chr2	+	2052	6	FSM	ENSMUSG00000027160.17	ENSMUST00000028580.12	2070	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTGATAAAATCACCATT	NA	NA	NA	NA	NA	NA	NA	NA	109848173	109875655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109848560_109852226_109852360_109862676_109862785_109870918_109871078_109871605_109871748_109874531
ENSMUSG00000027162.8_0	chr2	+	4225	5	FSM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGGGTAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	109721199	109731347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109721267_109724809_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUSG00000027162.8_3	chr2	+	4155	4	ISM	ENSMUSG00000027162.8	ENSMUST00000028583.8	4228	5	3615	1	3615	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAGGGGTAATGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	109724812	109731347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_109724929_109725452_109725525_109726580_109726791_109727590
ENSMUSG00000027163.14_0	chr2	+	1183	6	FSM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATGATGCTGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	101716598	101731984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_101716665_101725479_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_1	chr2	+	1115	5	ISM	ENSMUSG00000027163.14	ENSMUST00000028584.8	1191	6	8884	7	-1901	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCATGATGCTGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	101725481	101731984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_101725606_101727384_101727525_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027163.14_2	chr2	+	417	4	FSM	ENSMUSG00000027163.14	ENST00000263401.10	435	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGCTATTGGCCTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	101727394	101731416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_101727529_101729212_101729248_101730213_101730318_101731272
ENSMUSG00000027164.9_0	chr2	+	6157	8	FSM	ENSMUSG00000027164.9	ENSMUST00000004949.8	6169	8	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCACGTTGCTGGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	101508790	101532008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_101508966_101511169_101511373_101514823_101515142_101518808_101518960_101520400_101520560_101521772_101521845_101524599_101524678_101527007
ENSMUSG00000027165.17_0	chr2	-	2255	7	FSM	ENSMUSG00000027165.17	ENSMUST00000111231.10	2273	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATGTACATACACTTC	NA	NA	NA	NA	NA	NA	NA	NA	101459325	101391133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101459225
ENSMUSG00000027165.17_1	chr2	-	2157	6	ISM	ENSMUSG00000027165.17	ENSMUST00000090513.11	969	7	10369	-1335	10369	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCATGTACATACACTTC	NA	NA	NA	NA	NA	NA	NA	NA	101441022	101391133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868
ENSMUSG00000027165.17_4	chr2	-	917	7	FSM	ENSMUSG00000027165.17	ENSMUST00000160722.8	931	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTCCCTCTGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	101479868	101392473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_101392700_101406356_101406497_101413865_101413933_101415588_101415661_101416656_101416815_101440868_101441021_101479766
ENSMUSG00000027166.15_0	chr2	-	1180	5	FSM	ENSMUSG00000027166.15	ENSMUST00000102555.11	1197	5	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGGTAAGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	105833885	105797061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105797440_105800792_105800862_105811326_105811466_105832273_105832421_105833438
ENSMUSG00000027167.12_0	chr2	-	3035	10	FSM	ENSMUSG00000027167.12	ENSMUST00000122965.8	3048	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTAACCTTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	105734901	105531376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105533207_105622560_105622668_105624861_105624971_105639610_105639800_105644610_105644696_105662475_105662616_105672576_105672706_105696303_105696426_105727246_105727283_105734613
ENSMUSG00000027168.22_0	chr2	+	770	6	FSM	ENSMUSG00000027168.22	ENST00000638965.1	791	6	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGCTCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105499279	105525796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105499395_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650
ENSMUSG00000027168.22_1	chr2	+	2458	14	FSM	ENSMUSG00000027168.22	ENST00000639409.1	2468	14	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATATTTGACAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	105504923	105527402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105505009_105506088_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515095_105515138_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650_105525802_105526614
ENSMUSG00000027168.22_17	chr2	+	3105	12	FSM	ENSMUSG00000027168.22	ENSMUST00000111082.8	3116	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTATAGTGTGGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	105506478	105527700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105507184_105510154_105510235_105510591_105510653_105514172_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650_105525802_105526614
ENSMUSG00000027168.22_23	chr2	+	1549	9	FSM	ENSMUSG00000027168.22	ENST00000638963.1	1559	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATATCAAATACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	105510598	105527087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105510653_105514172_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105526614
ENSMUSG00000027168.22_27	chr2	+	1489	10	FSM	ENSMUSG00000027168.22	ENST00000481563.6	1504	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGCTCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105512699	105525796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105512979_105514172_105514304_105515095_105515138_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650
ENSMUSG00000027168.22_32	chr2	+	1487	8	ISM	ENSMUSG00000027168.22	ENST00000638963.1	1559	9	3582	10	8	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATATCAAATACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	105514180	105527087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105526614
ENSMUSG00000027168.22_34	chr2	+	1052	8	FSM	ENSMUSG00000027168.22	ENST00000638755.1	1066	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGGTGAGCTCTCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105514180	105525796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105514304_105515231_105515340_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081_105523198_105525650
ENSMUSG00000027168.22_8	chr2	+	1787	11	FSM	ENSMUSG00000027168.22	ENST00000639034.2	1794	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAAAACAAACACTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	105505784	105523382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105505995_105506088_105506318_105510154_105510235_105510591_105510653_105514172_105514304_105515231_105515448_105516122_105516289_105521909_105522069_105522538_105522622_105522814_105522966_105523081
ENSMUSG00000027170.13_0	chr2	-	1262	11	FSM	ENSMUSG00000027170.13	ENSMUST00000028592.12	1283	11	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGAAATTTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	104847415	104830011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104830187_104830586_104830648_104831615_104831760_104835269_104835352_104836125_104836226_104837100_104837185_104843195_104843291_104843542_104843667_104844089_104844229_104845114_104845248_104847290
ENSMUSG00000027171.11_0	chr2	-	2860	6	FSM	ENSMUSG00000027171.11	ENSMUST00000028593.11	2872	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCACCAAAACAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104680215	104661091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104663156_104669666_104669800_104672399_104672449_104675334_104675499_104679420_104679546_104679890
ENSMUSG00000027173.8_0	chr2	-	1788	9	FSM	ENSMUSG00000027173.8	ENSMUST00000028595.8	1801	9	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATTACTCAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	104573215	104552133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104552464_104553220_104553300_104553383_104553510_104553652_104553796_104554914_104555127_104557466_104557657_104558427_104558556_104560528_104560920_104573026
ENSMUSG00000027175.11_0	chr2	-	5455	10	FSM	ENSMUSG00000027175.11	ENSMUST00000111118.8	5474	10	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCTTGTTCTGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	104542489	104508368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104512304_104514438_104514612_104515707_104515890_104518722_104518920_104520838_104520976_104527854_104528076_104528879_104529001_104530186_104530320_104536700_104536888_104542320
ENSMUSG00000027176.9_0	chr2	+	2800	21	FSM	ENSMUSG00000027176.9	ENSMUST00000028599.8	2817	21	6	11	6	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGCCTCCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	104420873	104495763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104421048_104439215_104439318_104439435_104439532_104474633_104474667_104475323_104475422_104476744_104476812_104476953_104476989_104477068_104477196_104478514_104478593_104479797_104479961_104481986_104482097_104482789_104482907_104483348_104483424_104484505_104484650_104486033_104486137_104489610_104489681_104490863_104491060_104493638_104493793_104494413_104494509_104494641_104494703_104495061
ENSMUSG00000027177.15_0	chr2	-	7239	16	FSM	ENSMUSG00000027177.15	ENST00000379016.7	7249	16	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCTTGCTGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	104324582	104256828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104324292
ENSMUSG00000027177.15_18	chr2	-	7293	16	FSM	ENSMUSG00000027177.15	ENST00000456517.2	7309	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCGGCAAACAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	104323919	104256838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104260677_104261071_104261200_104261496_104261733_104263512_104263654_104263899_104264191_104264682_104264845_104264934_104265060_104265280_104265403_104267341_104267466_104268195_104268353_104269574_104269760_104270550_104270638_104271589_104271710_104276856_104276981_104301093_104302193_104323565
ENSMUSG00000027180.13_0	chr2	+	4725	11	FSM	ENSMUSG00000027180.13	ENSMUST00000028603.10	4740	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCATCAATGTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	103858074	103893579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885372_103890226
ENSMUSG00000027180.13_4	chr2	+	3706	10	FSM	ENSMUSG00000027180.13	ENSMUST00000111135.8	3740	10	27	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTTAAAGCTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	103858215	103887861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103858312_103860703_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ENSMUSG00000027180.13_5	chr2	+	4182	11	FSM	ENSMUSG00000027180.13	ENSMUST00000111136.8	4211	11	21	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCTGTAAACTACATTGC	NA	NA	NA	NA	NA	NA	NA	NA	103858211	103893340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180_103885205_103890226
ENSMUSG00000027180.13_6	chr2	+	3715	10	FSM	ENSMUSG00000027180.13	ENSMUST00000102565.4	3720	10	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTTATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	103858207	103887847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103858312_103860688_103860779_103863940_103864105_103873248_103873364_103876002_103876208_103878278_103878325_103880615_103880701_103881478_103881602_103883709_103883826_103885180
ENSMUSG00000027184.15_0	chr2	-	6151	19	FSM	ENSMUSG00000027184.15	ENSMUST00000028607.13	6169	19	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCACTGCAGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	103627984	103593293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075_103627286_103627807
ENSMUSG00000027184.15_14	chr2	-	4056	18	FSM	ENSMUSG00000027184.15	ENSMUST00000111147.8	4069	18	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCTCATGTGTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	103627437	103595363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_103597209_103598750_103598815_103599147_103599249_103599779_103599975_103602041_103602193_103603013_103603164_103603318_103603430_103604078_103604141_103605761_103605871_103605954_103606111_103606278_103606366_103606449_103606503_103608307_103608446_103609508_103609592_103609677_103609917_103613300_103613388_103613487_103613551_103627075
ENSMUSG00000027185.16_0	chr2	-	3867	29	FSM	ENSMUSG00000027185.16	ENSMUST00000028608.13	3879	29	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACCATTTGCCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	103591611	103551608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_103552274_103554536_103554621_103555433_103555508_103556008_103556108_103556464_103556585_103557060_103557234_103558147_103558259_103558344_103558442_103560592_103560642_103560854_103560989_103561651_103561769_103562317_103562393_103562498_103562601_103563263_103563381_103564088_103564186_103564719_103564871_103565210_103565336_103570097_103570235_103573388_103573488_103573608_103573703_103574630_103574765_103578323_103578432_103578530_103578646_103580566_103580629_103582924_103583048_103584403_103584576_103587513_103587606_103588015_103588139_103591393
ENSMUSG00000027187.11_0	chr2	-	2592	13	FSM	ENSMUSG00000027187.11	ENSMUST00000028610.10	2613	13	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTCAACGTCCTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	103315493	103284202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_103285167_103285422_103285507_103287194_103287303_103290586_103290718_103293631_103293771_103297421_103297575_103298038_103298231_103300643_103300770_103302110_103302216_103303295_103303427_103304674_103304786_103307093_103307266_103315317
ENSMUSG00000027188.9_0	chr2	+	2307	9	FSM	ENSMUSG00000027188.9	ENST00000615849.4	2330	9	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGACCATGTGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	102380296	102473102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_102380610_102411077_102411255_102416939_102417069_102445180_102445289_102464672_102464886_102466518_102466586_102469555_102469789_102471011_102471305_102472328
ENSMUSG00000027189.17_0	chr2	-	5596	5	FSM	ENSMUSG00000027189.17	ENSMUST00000102573.8	5612	5	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCATTTGTCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102231237	102130471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_102134850_102177308_102177329_102187761_102188002_102211208_102211287_102230357
ENSMUSG00000027193.13_0	chr2	-	3724	14	FSM	ENSMUSG00000027193.13	ENSMUST00000028617.7	3736	14	9	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTAGATATTAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	94268472	94242029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94260023_94260186_94268268
ENSMUSG00000027193.13_6	chr2	-	1999	13	FSM	ENSMUSG00000027193.13	ENST00000420461.6	2014	13	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTGTCGCATTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	94268457	94243577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_94244127_94248600_94248738_94249215_94249293_94251330_94251388_94251777_94251872_94252641_94252824_94253756_94253847_94255318_94255424_94255935_94256143_94257277_94257430_94257856_94257923_94258390_94258485_94268268
ENSMUSG00000027194.17_0	chr2	-	4567	25	FSM	ENSMUSG00000027194.17	ENSMUST00000111238.8	4590	25	14	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAATCATTCCGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	94237020	94131120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_94132213_94133889_94134034_94135288_94135409_94153433_94153518_94154706_94154867_94157042_94157164_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUSG00000027194.17_6	chr2	-	3396	20	FSM	ENSMUSG00000027194.17	ENSMUST00000094801.5	3408	20	7	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAATTTTTTAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	94237026	94158286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_94158831_94160862_94161017_94163137_94163398_94172971_94173143_94189095_94189283_94192684_94192910_94193044_94193123_94194610_94194777_94194918_94195035_94196866_94197014_94199657_94199771_94202081_94202243_94204862_94205003_94205426_94205572_94206374_94206485_94207945_94208078_94208338_94208451_94209033_94209204_94216436_94216527_94236851
ENSMUSG00000027195.11_0	chr2	-	1880	11	FSM	ENSMUSG00000027195.11	ENSMUST00000028619.5	1902	11	14	8	14	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAAGTGTATTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	93988295	93863041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93864007_93864271_93864422_93874217_93874284_93875705_93875788_93882598_93882634_93895898_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
ENSMUSG00000027196.12_0	chr2	+	1545	4	NIC	ENSMUSG00000027196.12	novel	1549	5	NA	NA	0	-5	intron_retention	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGGAAAGAAAATGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	93810378	93813915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_93810980_93811427_93811518_93812674_93812961_93813347
ENSMUSG00000027198.17_0	chr2	-	2860	14	FSM	ENSMUSG00000027198.17	ENSMUST00000028623.13	2871	14	11	0	-8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGTCTAGAATGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	93652902	93525975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93526617_93533538_93533622_93534827_93534957_93537578_93537723_93560502_93560670_93569914_93570105_93592897_93593030_93621354_93621449_93625979_93626120_93628516_93628713_93636369_93636487_93642241_93642332_93643743_93644310_93652731
ENSMUSG00000027199.15_0	chr2	-	2374	9	FSM	ENSMUSG00000027199.15	ENSMUST00000028624.9	2389	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1791	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGAGTTTGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	122441775	122424953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122426091_122427852_122427970_122428617_122428682_122430859_122431025_122431172_122431311_122432985_122433177_122434062_122434259_122440149_122440369_122441628
ENSMUSG00000027200.18_0	chr2	+	4328	19	FSM	ENSMUSG00000027200.18	ENST00000558816.5	4338	19	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTCCATACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	124451982	124508306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_124452198_124495500_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124504123_124504156_124505940_124507867_124507913
ENSMUSG00000027200.18_24	chr2	+	5491	17	FSM	ENSMUSG00000027200.18	ENST00000558014.5	5510	17	10	9	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCATTACATCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	124495504	124509681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502163_124502265_124505940_124507867_124507913
ENSMUSG00000027200.18_35	chr2	+	5685	19	FSM	ENSMUSG00000027200.18	ENST00000536845.7	5699	19	8	6	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGCCTTTTGATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	124495506	124509691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_124495664_124496066_124496179_124496715_124496777_124496897_124496961_124497072_124497175_124497405_124497497_124497929_124498050_124498749_124498839_124499563_124499782_124499890_124500023_124500329_124500486_124500565_124500740_124501487_124501629_124501726_124501805_124502202_124502265_124502624_124502682_124504123_124504292_124505940_124507867_124507913
ENSMUSG00000027201.17_0	chr2	-	2913	15	NIC	ENSMUSG00000027201.17	novel	2942	16	NA	NA	12	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTATACAGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	124965531	124929669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124940716_124940768_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
ENSMUSG00000027201.17_2	chr2	-	2960	15	NIC	ENSMUSG00000027201.17	novel	2999	16	NA	NA	-11	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTATACAGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	124965557	124929669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939482_124939555_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
ENSMUSG00000027201.17_3	chr2	-	2889	14	NIC	ENSMUSG00000027201.17	novel	2928	15	NA	NA	-12	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTATACAGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	124965558	124929669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_124930958_124937627_124937680_124937831_124938041_124939896_124939996_124940369_124940439_124942238_124942341_124950875_124950940_124951073_124951124_124951589_124951744_124952399_124952592_124955768_124955863_124957357_124957411_124958584_124958794_124965304
ENSMUSG00000027203.16_0	chr2	+	1001	7	FSM	ENSMUSG00000027203.16	ENSMUST00000082122.14	1020	7	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAACTGACTGGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	125089121	125099661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125089322_125089683_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027203.16_3	chr2	+	1935	6	FSM	ENSMUSG00000027203.16	ENSMUST00000051605.9	1950	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAGAAGTATATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	125089411	125100523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125089817_125091085_125091178_125092892_125092938_125098768_125098844_125098989_125099061_125099276
ENSMUSG00000027204.14_0	chr2	-	9841	66	FSM	ENSMUSG00000027204.14	ENSMUST00000028633.13	9847	66	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTATCCCTGCTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	125348305	125142519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125143896_125145005_125145181_125148189_125148422_125150389_125150510_125151300_125151430_125151676_125151794_125154419_125154543_125154758_125154885_125156513_125156721_125157278_125157405_125158886_125159019_125159331_125159455_125160916_125161037_125162782_125162900_125163115_125163182_125163535_125163686_125166745_125166872_125170012_125170133_125170910_125171040_125172452_125172570_125174177_125174304_125177284_125177408_125180352_125180479_125183175_125183248_125183922_125184082_125184719_125184843_125185724_125185851_125185944_125186014_125187774_125187940_125188249_125188373_125190026_125190150_125192165_125192292_125193601_125193725_125193872_125193996_125200725_125200852_125202027_125202154_125203103_125203227_125204381_125204508_125204594_125204721_125205531_125205661_125205781_125205908_125207403_125207632_125209502_125209629_125211253_125211305_125211713_125211852_125212065_125212186_125212695_125212822_125214310_125214437_125215830_125215885_125219706_125219860_125220926_125221050_125223904_125224028_125225530_125225657_125229185_125229306_125231090_125231232_125231799_125231986_125236531_125236691_125239697_125239824_125245023_125245150_125254525_125254724_125308522_125308619_125310462_125310559_125319416_125319516_125321109_125321193_125347359_125347710_125348258
ENSMUSG00000027204.14_1	chr2	-	11914	65	FSM	ENSMUSG00000027204.14	ENSMUST00000103234.2	11971	65	57	0	57	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTGAAATAAAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	125349856	125142546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125143896_125145005_125145181_125148189_125148422_125150389_125150510_125151300_125151430_125151676_125151794_125154419_125154543_125154758_125154885_125156513_125156721_125157278_125157405_125158886_125159019_125159331_125159455_125160916_125161037_125162782_125162900_125163115_125163182_125163535_125163686_125166745_125166872_125170012_125170133_125170910_125171040_125172452_125172570_125174177_125174304_125177284_125177408_125180352_125180479_125183175_125183248_125183922_125184082_125184719_125184843_125185724_125185851_125185944_125186014_125187774_125187940_125188249_125188373_125190026_125190150_125192165_125192292_125193601_125193725_125193872_125193996_125200725_125200852_125202027_125202154_125203103_125203227_125204381_125204508_125204594_125204721_125205531_125205661_125205781_125205908_125207403_125207632_125209502_125209629_125211253_125211305_125211713_125211852_125212065_125212186_125212695_125212822_125214310_125214437_125215830_125215885_125219706_125219860_125220926_125221050_125223904_125224028_125225530_125225657_125229185_125229306_125231090_125231232_125231799_125231986_125236531_125236691_125239697_125239824_125245023_125245150_125254525_125254724_125308522_125308619_125310462_125310559_125319416_125319516_125321109_125321193_125347359
ENSMUSG00000027206.14_0	chr2	-	3383	13	FSM	ENSMUSG00000027206.14	ENSMUST00000110463.8	3392	13	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGGTGTGTGCATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	125701050	125672223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684653_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027206.14_16	chr2	-	1574	11	FSM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTCCTTTTCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	125700935	125673704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125700855
ENSMUSG00000027206.14_20	chr2	-	1493	10	ISM	ENSMUSG00000027206.14	ENST00000542928.5	1582	11	14089	0	14089	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTTCCTTTTCTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	125686854	125673704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729
ENSMUSG00000027206.14_9	chr2	-	2058	13	FSM	ENSMUSG00000027206.14	ENSMUST00000028635.6	2073	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTATAGCTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125701051	125673528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125674258_125675643_125675703_125676673_125676757_125678061_125678160_125681068_125681122_125681225_125681405_125682243_125682419_125684352_125684431_125684541_125684632_125686729_125686856_125690126_125690205_125691659_125691774_125700855
ENSMUSG00000027207.16_0	chr2	+	2592	10	FSM	ENSMUSG00000027207.16	ENSMUST00000028636.13	2605	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTTTCTTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	125701059	125826212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125701298_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027207.16_2	chr2	+	1906	10	FSM	ENSMUSG00000027207.16	ENSMUST00000094604.9	1928	10	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACTGAACTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	125708037	125825496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125708306_125720197_125720287_125729783_125729908_125735272_125735364_125738564_125738712_125771480_125771580_125773172_125773326_125788703_125788915_125817179_125817382_125824974
ENSMUSG00000027208.15_0	chr2	+	2662	4	FSM	ENSMUSG00000027208.15	ENSMUST00000064794.14	2672	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAAAGAATCAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	125876587	125933105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125876771_125877364_125877921_125930154_125930259_125931286
ENSMUSG00000027208.15_1	chr2	+	2267	3	FSM	ENSMUSG00000027208.15	ENSMUST00000110442.2	2287	3	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAGAAAAAAACCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	125876896	125932425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125877921_125930154_125930259_125931286
ENSMUSG00000027208.15_2	chr2	+	207	2	FSM	ENSMUSG00000027208.15	ENST00000514120.1	227	2	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTAAGTGTACATGG	NA	NA	NA	NA	NA	NA	NA	NA	125930166	125931471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125930259_125931356
ENSMUSG00000027208.15_3	chr2	+	117	1	ISM	ENSMUSG00000027208.15	ENSMUST00000064794.14	2672	4	54777	1634	1198	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACCTAAGTGTACATGG	NA	NA	NA	NA	NA	NA	NA	NA	125931354	125931471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_125931400_125931500
ENSMUSG00000027209.18_0	chr2	-	434	5	FSM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGGCGTGTACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125966536	125942885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125942955_125957922_125958050_125962902_125963002_125965910_125966013_125966499
ENSMUSG00000027209.18_1	chr2	-	383	4	ISM	ENSMUSG00000027209.18	ENST00000561064.5	440	5	535	9	535	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCAGCAGGCGTGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	125966001	125942888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_125942955_125957922_125958050_125962902_125963002_125965910
ENSMUSG00000027210.21_0	chr2	-	2794	12	FSM	ENSMUSG00000027210.21	ENSMUST00000102538.11	2810	12	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGGTGTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	115895513	115693545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_115694995_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ENSMUSG00000027210.21_1	chr2	-	3686	13	FSM	ENSMUSG00000027210.21	ENSMUST00000110908.9	3697	13	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGGTGTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	115896310	115693545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115895282
ENSMUSG00000027210.21_4	chr2	-	3217	13	FSM	ENSMUSG00000027210.21	ENSMUST00000110906.9	3229	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGACTGTGACGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	115895193	115693628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_115694995_115697290_115697386_115697749_115697861_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
ENSMUSG00000027210.21_7	chr2	-	2809	13	FSM	ENSMUSG00000027210.21	ENSMUST00000074285.8	2844	13	30	5	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTGAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115894963	115693785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_115694995_115697290_115697386_115697749_115697840_115699225_115699285_115752152_115752230_115830611_115830758_115879564_115879680_115889111_115889262_115889994_115890046_115891161_115891213_115891931_115892074_115893668_115893902_115894572
ENSMUSG00000027215.14_0	chr2	-	1805	10	FSM	ENSMUSG00000027215.14	ENSMUST00000028644.11	1824	10	12	7	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATCCAGTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93292835	93249462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93292674
ENSMUSG00000027215.14_1	chr2	-	1647	9	FSM	ENSMUSG00000027215.14	ENSMUST00000099696.8	1657	9	3	7	3	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATCCAGTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93292753	93249462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93292674
ENSMUSG00000027215.14_6	chr2	-	1681	10	FSM	ENSMUSG00000027215.14	ENSMUST00000116457.9	1683	10	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGATCCAGTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	93293291	93249462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93250288_93250584_93250669_93250899_93251101_93252171_93252274_93260289_93260365_93260475_93260601_93264205_93264279_93267732_93267816_93273713_93273790_93293254
ENSMUSG00000027219.14_0	chr2	+	3899	19	FSM	ENSMUSG00000027219.14	ENSMUST00000110525.8	3911	19	6	6	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGTTGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	122256963	122291612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122257117_122270334_122271488_122272039_122272137_122272240_122272333_122277366_122277462_122278250_122278435_122280243_122280386_122281406_122281521_122282008_122282087_122282463_122282545_122282964_122283046_122284961_122285088_122285169_122285301_122285712_122285882_122286039_122286238_122286801_122286884_122288364_122288464_122288648_122288761_122290900
ENSMUSG00000027220.3_0	chr2	+	3745	6	FSM	ENSMUSG00000027220.3	ENSMUST00000028648.3	3761	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGACATGTGGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	92745451	92786396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92745715_92771097_92771324_92773396_92773532_92776258_92776561_92781646_92781777_92783707
ENSMUSG00000027221.6_0	chr2	+	2664	3	FSM	ENSMUSG00000027221.6	ENSMUST00000065797.7	2680	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTGCCTGAGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	92430060	92445588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92430494_92442038_92442169_92443487
ENSMUSG00000027222.15_0	chr2	+	1384	11	FSM	ENSMUSG00000027222.15	ENSMUST00000028650.9	1392	11	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTGGCTCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	92205656	92211560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92206021_92206215_92206252_92206971_92207049_92207774_92207909_92208035_92208137_92208937_92209019_92209140_92209294_92209378_92209452_92209560_92209681_92210754_92210820_92211380
ENSMUSG00000027223.16_0	chr2	-	3270	12	FSM	ENSMUSG00000027223.16	ENSMUST00000111279.9	3274	12	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAGAGTGGGTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	92223072	92214020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217729_92217898_92217981_92219319_92219626_92221380_92221487_92222501
ENSMUSG00000027223.16_1	chr2	-	1432	11	FSM	ENSMUSG00000027223.16	ENST00000574657.1	1444	11	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCAGCACCCCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	92219594	92214698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92214767_92215068_92215168_92215268_92215340_92215491_92215609_92215757_92215868_92216139_92216313_92216707_92216784_92216915_92217163_92217614_92217729_92217898_92217981_92219319
ENSMUSG00000027224.15_0	chr2	-	2462	5	FSM	ENSMUSG00000027224.15	ENSMUST00000110538.8	2467	5	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAGGAAAGACAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	122137328	122132675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122134480_122135106_122135325_122135543_122135758_122136791_122136850_122137160
ENSMUSG00000027224.15_1	chr2	-	1495	10	FSM	ENSMUSG00000027224.15	ENSMUST00000110537.8	1506	10	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCTAAGGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	122144174	122134040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122134480_122135106_122135325_122135543_122135758_122136034_122136170_122136791_122136850_122137160_122137345_122138371_122138432_122143412_122143530_122143879_122143926_122144150
ENSMUSG00000027224.15_2	chr2	-	1473	9	ISM	ENSMUSG00000027224.15	ENSMUST00000110537.8	1506	10	249	9	249	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGCTAAGGCTCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	122143925	122134038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_122134480_122135106_122135325_122135543_122135758_122136034_122136170_122136791_122136850_122137160_122137345_122138371_122138432_122143412_122143530_122143879
ENSMUSG00000027224.15_3	chr2	-	1418	8	ISM	ENSMUSG00000027224.15	ENSMUST00000110537.8	1506	10	652	11	652	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGCTAAGGCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	122143522	122134040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_122134480_122135106_122135325_122135543_122135758_122136034_122136170_122136791_122136850_122137160_122137345_122138371_122138432_122143412
ENSMUSG00000027227.8_0	chr2	+	2343	9	FSM	ENSMUSG00000027227.8	ENSMUST00000110551.4	2352	9	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGTATGTGGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	122065236	122095819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122065440_122076962_122076997_122079279_122079445_122083667_122083828_122087322_122087442_122089545_122089612_122090660_122090837_122093668_122093791_122094521
ENSMUSG00000027230.10_0	chr2	-	2583	12	FSM	ENSMUSG00000027230.10	ENSMUST00000028663.5	2603	12	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCAACCTTGACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	91854835	91812680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91813353_91813509_91813778_91816505_91816633_91817380_91817481_91821051_91821121_91821253_91821313_91821470_91821621_91822231_91822390_91823615_91823695_91825601_91825787_91832189_91832419_91854348
ENSMUSG00000027233.5_0	chr2	-	1157	10	FSM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGTAAGTGCTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	121956668	121951646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199_121956354_121956611
ENSMUSG00000027233.5_1	chr2	-	1091	9	ISM	ENSMUSG00000027233.5	ENST00000682850.1	1165	10	324	8	324	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGAGTAAGTGCTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	121956344	121951646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_121951790_121952264_121952360_121954198_121954340_121954816_121954977_121955099_121955234_121955327_121955382_121955562_121955661_121955750_121955872_121956199
ENSMUSG00000027236.9_0	chr2	+	5399	8	FSM	ENSMUSG00000027236.9	ENSMUST00000028668.8	5413	8	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCTGTCTTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121859039	121887078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121880967_121881130_121882222_121882297_121882447
ENSMUSG00000027236.9_3	chr2	+	923	7	FSM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAACAAAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	121859142	121882867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121859206_121859288_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121882222_121882297_121882447
ENSMUSG00000027236.9_7	chr2	+	851	6	ISM	ENSMUSG00000027236.9	ENST00000535391.5	937	7	155	14	155	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAACAAAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	121859297	121882867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_121859393_121871636_121871692_121872062_121872155_121877916_121878032_121882222_121882297_121882447
ENSMUSG00000027238.18_1	chr2	-	2202	14	NNC	ENSMUSG00000027238.18	novel	2222	14	NA	NA	14	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACTAGACTGATGATT	NA	NA	NA	NA	NA	NA	NA	NA	121637459	121378796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_121379714_121383818_121383926_121384745_121384815_121386050_121386126_121387797_121387890_121388304_121388369_121393365_121393455_121399373_121399462_121404025_121404150_121406802_121406901_121416386_121416466_121416909_121416953_121422138_121422247_121637210
ENSMUSG00000027239.15_0	chr2	-	627	4	FSM	ENSMUSG00000027239.15	ENST00000395569.8	638	4	5	6	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATAAAAGCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91762120	91760154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91760461_91761162_91761325_91761716_91761794_91762038
ENSMUSG00000027239.15_1	chr2	-	545	3	ISM	ENSMUSG00000027239.15	ENST00000395569.8	638	4	332	6	240	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATAAAAGCCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91761793	91760154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_91760461_91761162_91761325_91761716
ENSMUSG00000027242.15_0	chr2	+	4165	13	FSM	ENSMUSG00000027242.15	ENSMUST00000110602.9	4170	13	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	121337265	121375338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121337330_121341019_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
ENSMUSG00000027242.15_1	chr2	+	4098	12	ISM	ENSMUSG00000027242.15	ENSMUST00000110603.2	2341	13	694	-1848	694	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTTTGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	121341022	121375338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_121341407_121348185_121348279_121349898_121349955_121355932_121356063_121357282_121357385_121357482_121357527_121359291_121359446_121361766_121361923_121364588_121364804_121365904_121366058_121367587_121367642_121372781
ENSMUSG00000027243.9_0	chr2	+	2289	3	FSM	ENSMUSG00000027243.9	ENSMUST00000090608.6	2308	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTTTCAAAAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91541279	91551884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91541597_91542424_91543211_91550698
ENSMUSG00000027244.15_0	chr2	-	3533	16	FSM	ENSMUSG00000027244.15	ENSMUST00000076803.12	3551	16	10	8	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATAGCTTCCTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	91540911	91504970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526345_91540591
ENSMUSG00000027244.15_14	chr2	-	1860	15	FSM	ENSMUSG00000027244.15	ENST00000530500.5	1881	15	14	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTCGGGCCGTCGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	91540883	91506533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91540591
ENSMUSG00000027244.15_5	chr2	-	2597	16	FSM	ENSMUSG00000027244.15	ENST00000524625.5	2610	16	12	1	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGGCCTCCCGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91540871	91505908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027244.15_9	chr2	-	2827	18	FSM	ENSMUSG00000027244.15	ENST00000683050.1	2834	18	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGGCCTCCCGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	91540891	91505908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91506809_91509071_91509201_91509657_91509775_91510264_91510343_91510687_91510803_91511903_91512041_91512370_91512482_91513147_91513247_91515013_91515105_91515495_91515595_91516126_91516224_91516845_91516887_91518985_91519127_91520135_91520183_91522772_91522893_91524269_91524351_91526262_91526387_91540591
ENSMUSG00000027245.12_0	chr2	+	4149	5	FSM	ENSMUSG00000027245.12	ENSMUST00000110612.8	4170	5	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGAAACAAATTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121283779	121288979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121287188_121287489_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUSG00000027247.17_0	chr2	+	3170	14	FSM	ENSMUSG00000027247.17	ENSMUST00000111329.8	3201	14	13	18	13	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGTAAATGAAAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91480217	91502653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91480598_91482108_91482169_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_10	chr2	+	2858	13	FSM	ENSMUSG00000027247.17	ENSMUST00000111331.9	2883	13	7	18	7	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGTAAATGAAAAAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	91480469	91502653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91480598_91484417_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_14	chr2	+	1786	13	FSM	ENSMUSG00000027247.17	ENST00000311956.9	1796	13	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGCATTGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	91480538	91501627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91480598_91484394_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027247.17_30	chr2	+	1720	12	ISM	ENSMUSG00000027247.17	ENSMUST00000111330.3	3068	13	849	1020	849	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAGCATTGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	91484401	91501627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_91484553_91484780_91484877_91492642_91492731_91498541_91498674_91498830_91498918_91499073_91499173_91499530_91499639_91499729_91499807_91499996_91500075_91500490_91500620_91500810_91500915_91501056
ENSMUSG00000027248.14_0	chr2	+	2752	13	FSM	ENSMUSG00000027248.14	ENSMUST00000028683.14	2770	13	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCTAAATCAGAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121244264	121269159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121244687_121252929_121253009_121255005_121255124_121257075_121257184_121259934_121260065_121262132_121262250_121262754_121262881_121263997_121264181_121264465_121264575_121265269_121265399_121266401_121266482_121266837_121266896_121268066
ENSMUSG00000027253.16_0	chr2	+	7917	38	FSM	ENSMUSG00000027253.16	ENSMUST00000028689.4	7926	38	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTCATGTGTAATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	91287860	91344120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91288098_91301473_91301621_91303501_91303619_91303902_91304017_91304252_91304370_91304692_91304822_91305050_91305171_91305527_91305654_91306610_91306737_91306928_91307064_91307442_91307569_91307865_91308097_91308854_91309012_91310657_91310876_91311037_91311215_91312202_91312326_91316098_91316308_91316432_91316515_91317383_91317490_91318776_91318979_91320702_91320893_91320979_91321112_91322301_91322443_91322689_91322777_91322881_91323054_91324086_91324250_91324365_91324592_91325101_91325406_91327234_91327454_91327600_91327736_91328684_91328794_91331333_91331479_91331725_91331840_91332255_91332392_91335937_91336006_91336345_91336434_91338813_91338956_91341773
ENSMUSG00000027254.14_0	chr2	+	11809	7	FSM	ENSMUSG00000027254.14	ENSMUST00000094639.10	11825	7	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTACAACATTGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	121120086	121141303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121120354_121121200_121121303_121129077_121129161_121129386_121129528_121129749_121137854_121137995_121138217_121138412
ENSMUSG00000027254.14_2	chr2	+	10145	6	FSM	ENSMUSG00000027254.14	ENST00000300231.6	10155	6	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCAGATGGTGTGGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	121125927	121139911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121126024_121129077_121129161_121129386_121129528_121129749_121137858_121137998_121138217_121138412
ENSMUSG00000027254.14_4	chr2	+	10135	6	FSM	ENSMUSG00000027254.14	ENSMUST00000110639.8	10145	6	7	3	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGTGGTGCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	121125941	121139916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121126024_121129077_121129161_121129386_121129528_121129749_121137854_121137995_121138217_121138412
ENSMUSG00000027255.15_1	chr2	+	3056	16	FSM	ENSMUSG00000027255.15	ENSMUST00000080008.13	3068	16	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91095329	91107275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_11	chr2	+	2783	17	FSM	ENSMUSG00000027255.15	ENSMUST00000028691.7	2791	17	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCCTCTCCGTCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91095644	91107275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91097680_91097762_91098501_91098584_91098796_91098854_91099414_91099457_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027255.15_4	chr2	+	2868	15	FSM	ENSMUSG00000027255.15	ENST00000426335.6	2887	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCCCAAGGGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91095410	91107249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91095750_91095916_91096036_91096570_91096644_91097469_91097602_91098501_91098584_91098796_91098854_91099796_91099850_91100277_91100415_91100502_91100635_91103885_91104015_91104097_91104233_91105139_91105267_91105417_91105512_91105620_91105740_91106109
ENSMUSG00000027257.14_14	chr2	+	1980	11	FSM	ENSMUSG00000027257.14	ENSMUST00000111349.9	1993	11	6	7	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGTGAGCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91087679	91095017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91087922_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027257.14_15	chr2	+	1763	11	FSM	ENSMUSG00000027257.14	ENST00000539589.5	1777	11	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGAGGTTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	91087686	91094810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91087922_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094112_91094232_91094535
ENSMUSG00000027257.14_2	chr2	+	1846	11	FSM	ENSMUSG00000027257.14	ENSMUST00000028694.12	1862	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTTGTGAGCGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91087167	91095017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91087272_91090208_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027257.14_26	chr2	+	1465	9	FSM	ENSMUSG00000027257.14	ENST00000298838.11	1473	9	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGAGGTTGGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	91090518	91094810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094112_91094232_91094535
ENSMUSG00000027257.14_5	chr2	+	1845	11	FSM	ENSMUSG00000027257.14	ENSMUST00000168916.8	1859	11	12	2	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGAGCGTCTTTTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	91087169	91095022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91087272_91090212_91090273_91090515_91090607_91090748_91090906_91091515_91091752_91091855_91092012_91093112_91093289_91093403_91093525_91093631_91093769_91094109_91094232_91094535
ENSMUSG00000027259.16_6	chr2	+	929	8	FSM	ENSMUSG00000027259.16	ENST00000422466.6	947	8	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATACATTGTAGCCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120973016	120986027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120973136_120973629_120973691_120976513_120976602_120978721_120978804_120980700_120980828_120982910_120983050_120985199_120985301_120985815
ENSMUSG00000027261.3_0	chr2	-	2024	8	FSM	ENSMUSG00000027261.3	ENSMUST00000028704.3	2045	8	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAGTAATTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	134396273	134339286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_134340248_134342735_134342806_134342917_134343077_134347490_134347583_134364904_134365081_134372461_134372718_134390048_134390201_134396115
ENSMUSG00000027263.13_0	chr2	+	4225	18	FSM	ENSMUSG00000027263.13	ENSMUST00000110658.8	4250	18	17	8	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACCACGTCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121001665	121029243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027263.13_4	chr2	+	2897	19	FSM	ENSMUSG00000027263.13	ENSMUST00000186659.7	2915	19	11	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACCACGTCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121001700	121029243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020307_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215_121027352_121028644
ENSMUSG00000027263.13_7	chr2	+	4187	18	FSM	ENSMUSG00000027263.13	ENSMUST00000039541.12	4206	18	11	8	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACCACGTCTGGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	121001706	121029243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121001953_121004038_121004168_121005820_121005944_121006251_121006306_121007008_121007066_121009150_121009231_121013969_121014172_121014814_121014981_121015182_121015308_121018612_121018664_121019005_121019112_121019842_121019951_121020304_121020447_121022713_121022892_121024422_121024558_121025890_121026008_121026583_121026724_121027215
ENSMUSG00000027272.6_0	chr2	-	7740	47	FSM	ENSMUSG00000027272.6	ENSMUST00000028728.6	7768	47	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAAAAGGGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	120801183	120690764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120693273_120694798_120694901_120696870_120697042_120698706_120698785_120701469_120701527_120703604_120703714_120705846_120705981_120707439_120707540_120711511_120711663_120712701_120712770_120720256_120720354_120722552_120722609_120723548_120723698_120725552_120725647_120726976_120727075_120730981_120731132_120732082_120732177_120734474_120734681_120737324_120737507_120739902_120739990_120741582_120741693_120742478_120742579_120745347_120745503_120745848_120745898_120746904_120747008_120748301_120748355_120751858_120751984_120754612_120754677_120756435_120756538_120756774_120756841_120759866_120759978_120760201_120760264_120761326_120761508_120764784_120764914_120765696_120765797_120771447_120771606_120772957_120773057_120775131_120775221_120776314_120776423_120776754_120776879_120777102_120777166_120778238_120778378_120780520_120780652_120786090_120786202_120791565_120791645_120793844_120794102_120801002
ENSMUSG00000027274.17_0	chr2	-	2928	6	FSM	ENSMUSG00000027274.17	ENSMUST00000028730.13	2935	6	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTATACAATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	136733298	136715702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136733198
ENSMUSG00000027274.17_1	chr2	-	3168	6	FSM	ENSMUSG00000027274.17	ENSMUST00000110089.9	3178	6	7	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGTATACAATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	136733302	136715702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_136716627_136718008_136718120_136719534_136719711_136722170_136723560_136727392_136727621_136732962
ENSMUSG00000027276.8_0	chr2	-	5577	26	FSM	ENSMUSG00000027276.8	ENSMUST00000028735.8	5612	26	24	11	24	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAACATGGAACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	136958540	136923386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_136925402_136926201_136926353_136926494_136926627_136926841_136927076_136927165_136927276_136927837_136927952_136928996_136929083_136929535_136929564_136930031_136930149_136930315_136930430_136930516_136930631_136931131_136931246_136931684_136931850_136932774_136932926_136933355_136933530_136933869_136933917_136934416_136934531_136935126_136935241_136936372_136936487_136937366_136937487_136938112_136938244_136941975_136942037_136943500_136943756_136948786_136948839_136957323_136957630_136958096
ENSMUSG00000027281.17_0	chr2	+	5076	8	FSM	ENSMUSG00000027281.17	ENSMUST00000099311.9	5089	8	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAAGTAAGTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	136734093	136913863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_136734282_136747462_136747521_136842103_136842194_136846853_136846975_136885919_136885998_136888636_136888726_136908049_136908151_136909512
ENSMUSG00000027282.18_0	chr2	+	2580	13	FSM	ENSMUSG00000027282.18	ENSMUST00000136872.8	2596	13	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAGAGGTGTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	90677509	90697149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683394_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027282.18_14	chr2	+	2341	13	FSM	ENSMUSG00000027282.18	ENSMUST00000150232.8	2377	13	27	9	-15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAATGCACCATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	90677601	90696975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90677730_90679714_90679800_90679941_90680049_90683183_90683211_90683367_90683458_90685267_90685326_90685779_90685832_90687149_90687210_90689819_90689914_90690806_90690855_90691725_90691794_90693933_90694010_90695527
ENSMUSG00000027284.17_0	chr2	-	6382	28	FSM	ENSMUSG00000027284.17	ENSMUST00000110701.8	6384	28	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACCACTACCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120561996	120546634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551492_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560987_120561182_120561674_120561892
ENSMUSG00000027284.17_3	chr2	-	5956	28	FSM	ENSMUSG00000027284.17	ENSMUST00000110700.2	5996	28	31	9	30	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATGACAAGAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	120561968	120547011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120549409_120549621_120549730_120550904_120551087_120551214_120551279_120551362_120551471_120553090_120553240_120553419_120553499_120553672_120553737_120554228_120554388_120554613_120554718_120554813_120554948_120555152_120555208_120555372_120555463_120555656_120555745_120556075_120556243_120556401_120556549_120556657_120556779_120557070_120557277_120557777_120557854_120558338_120558429_120558814_120558925_120559091_120559213_120560011_120560091_120560169_120560284_120560410_120560581_120560779_120560984_120561182_120561669_120561884
ENSMUSG00000027285.14_0	chr2	+	3131	6	FSM	ENSMUSG00000027285.14	ENSMUST00000124187.8	3154	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTAAATGTGGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	120439877	120452032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120440027_120442818_120442912_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_2	chr2	+	698	5	FSM	ENSMUSG00000027285.14	ENST00000568876.5	711	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATATTAATGGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	120439935	120449750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120440027_120443531_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027285.14_9	chr2	+	609	4	ISM	ENSMUSG00000027285.14	ENST00000568876.5	711	5	3600	7	3454	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATATTAATGGAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	120443529	120449750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120443602_120446335_120446469_120448353_120448463_120449455
ENSMUSG00000027286.17_0	chr2	-	1944	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102499.8	1961	6	11	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTGTCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120439990	120434724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439761
ENSMUSG00000027286.17_1	chr2	-	1828	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102496.8	1848	6	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTGTCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120439782	120434724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439669
ENSMUSG00000027286.17_2	chr2	-	1935	6	FSM	ENSMUSG00000027286.17	ENSMUST00000102497.10	1962	6	21	6	-19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTTTGTCTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	120439815	120434724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120435740_120436428_120436615_120438279_120438549_120439153_120439293_120439398_120439505_120439595
ENSMUSG00000027287.15_0	chr2	+	2702	8	FSM	ENSMUSG00000027287.15	ENSMUST00000110711.9	2723	8	12	9	-8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACTTATTCACAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	120398163	120431727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120398288_120414749_120414847_120415631_120415674_120416036_120416086_120416639_120416758_120425281_120425438_120427123_120427269_120429756
ENSMUSG00000027287.15_10	chr2	+	514	3	ISM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	408	5	408	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGCAGTCAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	120416037	120421650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120416086_120416639_120416758_120421302
ENSMUSG00000027287.15_13	chr2	+	467	2	ISM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	1009	5	1009	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGCAGTCAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	120416638	120421650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120416758_120421302
ENSMUSG00000027287.15_14	chr2	+	322	3	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	1009	8	1009	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTAAAGCCCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	120416638	120429814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120416758_120427123_120427269_120429756
ENSMUSG00000027287.15_4	chr2	+	559	4	FSM	ENSMUSG00000027287.15	ENST00000567094.5	564	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGCAGTCAGCACCTA	NA	NA	NA	NA	NA	NA	NA	NA	120415629	120421650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120415674_120416036_120416086_120416639_120416758_120421302
ENSMUSG00000027287.15_6	chr2	+	414	5	FSM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTAAAGCCCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	120415629	120429814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120415674_120416036_120416086_120416639_120416758_120427123_120427269_120429756
ENSMUSG00000027287.15_9	chr2	+	368	4	ISM	ENSMUSG00000027287.15	ENST00000397138.5	422	5	409	8	409	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTAAAGCCCTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	120416038	120429814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120416086_120416639_120416758_120427123_120427269_120429756
ENSMUSG00000027288.17_0	chr2	-	9071	22	FSM	ENSMUSG00000027288.17	ENSMUST00000055241.13	9085	22	13	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTTATTTGTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	120394275	120337301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775_120369974_120376323_120376386_120385711_120385797_120394167
ENSMUSG00000027288.17_13	chr2	-	3949	18	FSM	ENSMUSG00000027288.17	ENST00000565611.5	3961	18	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTCACTATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	120370315	120340085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120370031
ENSMUSG00000027288.17_18	chr2	-	3915	20	FSM	ENSMUSG00000027288.17	ENST00000565380.5	3932	20	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTCTCACTATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	120394270	120340085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120376323_120376386_120385711_120385797_120394167
ENSMUSG00000027288.17_39	chr2	-	6374	19	FSM	ENSMUSG00000027288.17	ENSMUST00000171215.8	6391	19	11	6	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATTATGTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120370330	120340100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120340624_120340967_120341115_120343183_120343256_120344097_120344170_120344623_120344744_120345922_120345986_120346394_120346587_120349545_120349663_120350891_120351027_120353165_120353312_120354001_120354055_120354345_120355106_120357229_120357566_120358817_120358879_120358955_120359111_120360928_120360999_120362075_120362704_120363991_120366161_120369775
ENSMUSG00000027291.16_0	chr2	-	4322	25	FSM	ENSMUSG00000027291.16	ENSMUST00000028752.8	4339	25	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAAAACCAAGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120183601	120146953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120148591_120149946_120150039_120151132_120151268_120151367_120151518_120152090_120152137_120152338_120152442_120153513_120153643_120154063_120154182_120154671_120154771_120155111_120155186_120155666_120155754_120155866_120156009_120156486_120156631_120159053_120159197_120163870_120164001_120168946_120169068_120169161_120169283_120169799_120169984_120172464_120172558_120173673_120173773_120174605_120174701_120176098_120176142_120176808_120176874_120180644_120180711_120183395
ENSMUSG00000027293.14_0	chr2	-	3716	6	FSM	ENSMUSG00000027293.14	ENSMUST00000028755.8	3730	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCAATGCACAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119985077	119919659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119922166_119927443_119927609_119932500_119932914_119958072_119958171_119967379_119967557_119984720
ENSMUSG00000027298.18_0	chr2	+	3961	19	FSM	ENSMUSG00000027298.18	ENSMUST00000028763.10	3989	19	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAAAGAATCAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	119630005	119648568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119630365_119632028_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643025_119643136_119643283_119643444_119643643_119643781_119647124
ENSMUSG00000027298.18_2	chr2	+	2574	18	FSM	ENSMUSG00000027298.18	ENST00000558165.3	2581	18	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTCAGGCAGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119632030	119647513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119632213_119632759_119632861_119633720_119633892_119635248_119635336_119636095_119636212_119638315_119638494_119639213_119639360_119639883_119640029_119640385_119640516_119640597_119640699_119640958_119641055_119641341_119641423_119642078_119642172_119642540_119642663_119643040_119643136_119643283_119643444_119643643_119643779_119647078
ENSMUSG00000027300.11_0	chr2	-	3728	6	FSM	ENSMUSG00000027300.11	ENSMUST00000028761.5	3731	6	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGACATTTATTTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	130471955	130431921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130433935_130439217_130439377_130441433_130442632_130444476_130444573_130446404_130446547_130471835
ENSMUSG00000027303.19_0	chr2	+	5301	21	FSM	ENSMUSG00000027303.19	ENSMUST00000028769.14	5325	21	23	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	130292220	130398043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130292479_130345393_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_1	chr2	+	3317	22	FSM	ENSMUSG00000027303.19	ENST00000399903.7	3329	22	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATATCGGTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130292216	130395940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130292479_130345305_130345473_130345913_130346256_130351749_130351777_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027303.19_10	chr2	+	3049	21	ISM	ENSMUSG00000027303.19	ENSMUST00000077303.4	3066	22	52929	3	52929	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAATATCGGTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130345392	130395940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_130345473_130345913_130346256_130359650_130359736_130360869_130360944_130361291_130361429_130374008_130374100_130374408_130374517_130375003_130375081_130377242_130377280_130379471_130379570_130381554_130381675_130382402_130382570_130383214_130383351_130384226_130384377_130385989_130386084_130386340_130386418_130386868_130387004_130391404_130391531_130391610_130391763_130394116_130394253_130395313
ENSMUSG00000027304.10_0	chr2	+	4638	18	FSM	ENSMUSG00000027304.10	ENSMUST00000028767.9	4664	18	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGATCAGATTTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	119505565	119565879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119505762_119522596_119522708_119531598_119531747_119535919_119536125_119541445_119541561_119542489_119542602_119550646_119550783_119551555_119551734_119555305_119555389_119557197_119557286_119557373_119557482_119558018_119558097_119558875_119558998_119559159_119559218_119560374_119560453_119561135_119561232_119562884_119562997_119563265
ENSMUSG00000027305.10_0	chr2	-	1453	5	FSM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	-5	3	-5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTACCCTCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	119493284	119485934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493089
ENSMUSG00000027305.10_1	chr2	-	1249	4	ISM	ENSMUSG00000027305.10	ENSMUST00000028768.2	1451	5	2148	3	11	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTACCCTCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	119491131	119485934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482
ENSMUSG00000027305.10_2	chr2	-	1300	5	FSM	ENSMUSG00000027305.10	ENSMUST00000110802.8	1308	5	0	8	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTACCCTCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	119493302	119485934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119486274_119486848_119486924_119488754_119488941_119490482_119491141_119493260
ENSMUSG00000027305.10_3	chr2	-	882	3	FSM	ENSMUSG00000027305.10	ENST00000676533.1	899	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGAGAACTGGGGACGT	NA	NA	NA	NA	NA	NA	NA	NA	119491134	119486129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119486174_119488754_119488941_119490482
ENSMUSG00000027306.16_0	chr2	+	2949	11	FSM	ENSMUSG00000027306.16	ENSMUST00000068225.15	2960	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATAAATCTATAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	119448786	119480638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119464200_119464300_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027306.16_7	chr2	+	3508	10	FSM	ENSMUSG00000027306.16	ENSMUST00000028771.8	3526	10	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACTGAAAAACTAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	119449210	119481720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119449377_119454598_119454668_119458027_119458175_119460817_119460987_119465958_119466069_119468928_119469045_119470057_119470216_119474264_119474382_119477570_119477680_119479373
ENSMUSG00000027309.19_1	chr2	-	6609	37	FSM	ENSMUSG00000027309.19	ENSMUST00000044766.15	6628	37	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGTACCTCTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	130682043	130548127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130551239_130551857_130551952_130552731_130552798_130554179_130554383_130554871_130554947_130555316_130555424_130559180_130559268_130561759_130561896_130569067_130569106_130572708_130572835_130578386_130578546_130579298_130579388_130580900_130581019_130581290_130581390_130582320_130582410_130583736_130583884_130590604_130590709_130606372_130606461_130607607_130607659_130609529_130609601_130612591_130612710_130616978_130617025_130617646_130617692_130619124_130619202_130620336_130620425_130626343_130626381_130627378_130627461_130633771_130633908_130635908_130635965_130640086_130640186_130648790_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ENSMUSG00000027309.19_10	chr2	-	1954	7	FSM	ENSMUSG00000027309.19	ENSMUST00000110243.8	1984	7	13	17	2	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGATAAGAAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	130682052	130647612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130648869_130652741_130652849_130654764_130654862_130656098_130656224_130662388_130662509_130664340_130664421_130681883
ENSMUSG00000027312.15_0	chr2	+	8731	29	FSM	ENSMUSG00000027312.15	ENSMUST00000028781.9	8745	29	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGCGTGCGTTTCG	NA	NA	NA	NA	NA	NA	NA	NA	130748419	130872244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130748888_130775305_130775390_130777443_130777558_130786801_130786931_130787933_130788140_130789478_130789648_130798940_130799032_130799824_130800069_130802304_130802489_130803439_130803595_130806763_130806849_130811924_130812146_130814144_130814267_130815296_130815436_130817797_130817989_130821849_130822070_130823823_130824010_130824514_130824749_130828637_130828776_130836040_130836135_130836950_130837004_130841065_130841161_130844681_130844761_130846367_130846526_130855526_130855589_130860532_130860612_130862860_130862969_130864921_130865037_130867736
ENSMUSG00000027313.4_0	chr2	+	965	4	FSM	ENSMUSG00000027313.4	ENST00000444189.7	975	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGTCTGAGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119181471	119184087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119182118_119182837_119182874_119183669_119183712_119183846
ENSMUSG00000027313.4_1	chr2	+	1622	3	FSM	ENSMUSG00000027313.4	ENSMUST00000028780.4	1637	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCTCCCAAGTAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	119181718	119184856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119182118_119182837_119182874_119183669
ENSMUSG00000027314.7_0	chr2	+	3391	11	FSM	ENSMUSG00000027314.7	ENST00000249749.7	3409	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAATTTATTACTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119156308	119166134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119156688_119156798_119157069_119157543_119157602_119158409_119158674_119159012_119159074_119159162_119159294_119161096_119161267_119161442_119161663_119162623_119163327_119164528_119164638_119165108
ENSMUSG00000027315.14_0	chr2	+	2243	11	FSM	ENSMUSG00000027315.14	ENSMUST00000028783.14	2273	11	15	15	15	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTACAAAATAAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	119067857	119079980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119067954_119068181_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUSG00000027315.14_1	chr2	+	2305	10	FSM	ENSMUSG00000027315.14	ENSMUST00000110817.3	2323	10	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTCCTCCCACCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	119068051	119080008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119068725_119075635_119075764_119075990_119076130_119076217_119076389_119076540_119076568_119076839_119076966_119077077_119077129_119078491_119078663_119078836_119078885_119079237
ENSMUSG00000027316.16_0	chr2	-	1361	5	ISM	ENSMUSG00000027316.16	ENSMUST00000110240.10	1426	6	1338	11	932	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGACCAACCTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	130883670	130881562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151_130883262_130883314
ENSMUSG00000027316.16_1	chr2	-	1419	6	FSM	ENSMUSG00000027316.16	ENSMUST00000110240.10	1426	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAACCTGGTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	130885008	130881558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130882246_130882318_130882396_130882935_130883071_130883151_130883262_130883314_130883679_130884962
ENSMUSG00000027318.18_0	chr2	-	1077	4	ISM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	2475	8	2475	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCAACATTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	130900652	130894798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_130894883_130894961_130895071_130897899_130898713_130900581
ENSMUSG00000027318.18_1	chr2	-	1152	5	FSM	ENSMUSG00000027318.18	ENST00000617732.1	1156	5	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGTCATCGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	130903124	130894791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130894883_130894961_130895071_130897899_130898713_130900581_130900659_130903062
ENSMUSG00000027323.11_0	chr2	+	3336	10	FSM	ENSMUSG00000027323.11	ENSMUST00000028795.10	3368	10	17	15	17	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATTAGCAAAAAAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	118943304	118967756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118943516_118946792_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_2	chr2	+	1034	8	FSM	ENSMUSG00000027323.11	ENST00000423169.6	1047	8	6	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTCTCTGGTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118946796	118965791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118946882_118949088_118949227_118951906_118952025_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118965529
ENSMUSG00000027323.11_3	chr2	+	1147	8	FSM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTCTCTGGTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118946797	118965791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118946882_118949088_118949337_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027323.11_8	chr2	+	1065	7	ISM	ENSMUSG00000027323.11	ENST00000382643.7	1157	8	2292	7	2292	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCTCTCTGGTAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	118949086	118965791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_118949337_118954264_118954357_118957543_118957639_118961984_118962099_118964554_118964685_118964867_118964990_118965529
ENSMUSG00000027324.2_0	chr2	+	2689	3	FSM	ENSMUSG00000027324.2	ENSMUST00000028796.2	2706	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAATATCCAAAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	118865276	118870239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118865950_118867398_118867696_118868520
ENSMUSG00000027324.2_1	chr2	+	1174	3	FSM	ENSMUSG00000027324.2	ENST00000559271.1	1190	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCCTTGAGACAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	118865653	118869284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118865767_118867398_118867696_118868520
ENSMUSG00000027326.14_0	chr2	+	6511	24	FSM	ENSMUSG00000027326.14	ENSMUST00000099542.9	6525	24	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAACAAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	118877601	118934590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118877705_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ENSMUSG00000027326.14_10	chr2	+	7739	22	ISM	ENSMUSG00000027326.14	ENSMUST00000028802.3	7800	23	1078	6	1078	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCCGGGCGTGGTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	118888839	118935976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ENSMUSG00000027326.14_3	chr2	+	5505	8	FSM	ENSMUSG00000027326.14	ENSMUST00000028799.12	5527	8	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGATACCAAATATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	118877640	118903388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118878042_118887761_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603
ENSMUSG00000027326.14_7	chr2	+	7794	23	FSM	ENSMUSG00000027326.14	ENSMUST00000028802.3	7800	23	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGCCGGGCGTGGTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	118887761	118935976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118887813_118888835_118888876_118890024_118890085_118892840_118892903_118894525_118894579_118896429_118896483_118898603_118903101_118906712_118906852_118907416_118907485_118908378_118908478_118911990_118912107_118917040_118917132_118917956_118918074_118919279_118919368_118924486_118924565_118924746_118924787_118925608_118925711_118927898_118928000_118930242_118930312_118931193_118931304_118932462_118932582_118932979_118933103_118934458
ENSMUSG00000027327.17_0	chr2	-	1239	6	FSM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAGAGGTTAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	131001938	130988244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513_130995631_131001872
ENSMUSG00000027327.17_1	chr2	-	1171	5	ISM	ENSMUSG00000027327.17	ENSMUST00000103188.10	1241	6	6312	0	6312	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTCAGAGGTTAGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	130995628	130988244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_130988896_130989080_130989204_130990075_130990215_130993537_130993681_130995513
ENSMUSG00000027329.10_0	chr2	-	2311	8	FSM	ENSMUSG00000027329.10	ENSMUST00000028801.8	2328	8	4	13	4	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACACATGATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	131029198	131012193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131013711_131013821_131013946_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484_131016703_131029110
ENSMUSG00000027329.10_1	chr2	-	2591	7	FSM	ENSMUSG00000027329.10	ENSMUST00000110218.9	2600	7	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTATCTATTACTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	131017115	131012238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131013711_131013821_131013946_131014123_131014179_131014289_131014330_131014542_131014700_131015115_131015228_131016484
ENSMUSG00000027330.17_0	chr2	+	3073	16	FSM	ENSMUSG00000027330.17	ENSMUST00000028804.15	3089	16	9	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTGAATAATCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	131028877	131040408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033642_131033732_131033856_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027330.17_3	chr2	+	2986	15	FSM	ENSMUSG00000027330.17	ENSMUST00000079857.9	3004	15	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGAATAATCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	131028887	131040409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131029301_131030025_131030148_131030998_131031051_131033064_131033107_131033269_131033307_131033515_131033687_131034476_131034609_131034987_131035069_131035158_131035333_131035514_131035608_131036034_131036098_131036258_131036358_131036545_131036680_131038896_131039009_131039148
ENSMUSG00000027331.16_0	chr2	+	4586	9	FSM	ENSMUSG00000027331.16	ENSMUST00000134661.8	4602	9	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTGAAAAAAAAAATTCACC	NA	NA	NA	NA	NA	NA	NA	NA	118644495	118668173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118644791_118644881_118644974_118648344_118648472_118649315_118649364_118653900_118654007_118654173_118654268_118659439_118659496_118662033_118662109_118664480
ENSMUSG00000027332.12_0	chr2	+	3640	12	FSM	ENSMUSG00000027332.12	ENSMUST00000028807.6	3665	12	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAACTATGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	118692444	118713375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118692649_118699915_118700006_118700211_118700264_118701858_118702029_118703365_118703460_118703648_118703786_118705145_118705243_118706796_118706891_118707368_118707451_118708141_118708247_118708355_118708429_118710933
ENSMUSG00000027333.19_0	chr2	+	2258	7	FSM	ENSMUSG00000027333.19	ENSMUST00000028806.12	2270	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTCAGTTCAAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	131333695	131367103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366662
ENSMUSG00000027333.19_3	chr2	+	1902	6	FSM	ENSMUSG00000027333.19	ENSMUST00000110189.9	1919	6	13	4	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	131333875	131367088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131366662
ENSMUSG00000027333.19_4	chr2	+	2141	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110186.9	2170	8	25	4	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGCTCCTTTGCTTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	131333887	131367088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131363092_131363978_131364140_131366163_131366254_131366662
ENSMUSG00000027333.19_6	chr2	+	2299	7	FSM	ENSMUSG00000027333.19	ENSMUST00000110181.8	2299	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGCCTGTCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	131333883	131367842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362841_131363092_131363978_131364140_131366662
ENSMUSG00000027333.19_7	chr2	+	1617	8	FSM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTCCTTTGCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	131333912	131367087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131333957_131353903_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366662
ENSMUSG00000027333.19_8	chr2	+	1565	7	ISM	ENSMUSG00000027333.19	ENSMUST00000110180.2	1617	8	19999	0	19999	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGCTCCTTTGCTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	131353911	131367087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_131354138_131358136_131358364_131362014_131362189_131362331_131362567_131362974_131363092_131363978_131364140_131366662
ENSMUSG00000027335.10_0	chr2	-	1874	2	FSM	ENSMUSG00000027335.10	ENSMUST00000103184.4	1899	2	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATCTCACCTCAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	131404178	131387769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131388461_131402995
ENSMUSG00000027339.16_0	chr2	-	4585	11	FSM	ENSMUSG00000027339.16	ENSMUST00000103182.8	4589	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGCCCCTGTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	131872122	131834775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481_131854573_131872078
ENSMUSG00000027339.16_1	chr2	-	4541	10	ISM	ENSMUSG00000027339.16	ENSMUST00000103182.8	4589	11	17550	4	17349	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGAGCCCCTGTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	131854572	131834775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_131838374_131840164_131840263_131842352_131842475_131843605_131843658_131844801_131844904_131846218_131846380_131847227_131847317_131849285_131849438_131851605_131851682_131854481
ENSMUSG00000027340.16_0	chr2	-	6350	16	FSM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTTCTGTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	131987019	131894420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391_131943647_131986931
ENSMUSG00000027340.16_2	chr2	-	6263	15	ISM	ENSMUSG00000027340.16	ENSMUST00000028815.15	6364	16	43381	5	43381	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTTCTGTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	131943647	131894420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_131898822_131900119_131900216_131902582_131902721_131903978_131904109_131907283_131907390_131908637_131908786_131913230_131913388_131913836_131913958_131917418_131917601_131919348_131919414_131920332_131920422_131931015_131931174_131933132_131933250_131936061_131936161_131943391
ENSMUSG00000027341.11_0	chr2	-	1597	4	FSM	ENSMUSG00000027341.11	ENSMUST00000028816.9	1612	4	13	2	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	132089714	132081413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089492
ENSMUSG00000027341.11_1	chr2	-	2941	3	FSM	ENSMUSG00000027341.11	ENSMUST00000110164.8	2957	3	14	2	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	132089560	132081413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132082547_132085938_132086062_132087875
ENSMUSG00000027341.11_2	chr2	-	1539	4	FSM	ENSMUSG00000027341.11	ENSMUST00000110163.8	1551	4	10	2	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGTGTTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	132089679	132081413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132082547_132085938_132086062_132087875_132087995_132089515
ENSMUSG00000027342.15_0	chr2	-	1502	6	FSM	ENSMUSG00000027342.15	ENSMUST00000028817.7	1518	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2021	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATTACGTTGTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	132095224	132091087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132091616_132091693_132091818_132093163_132093359_132093610_132093679_132093822_132093921_132094735
ENSMUSG00000027344.15_0	chr2	-	1669	11	FSM	ENSMUSG00000027344.15	ENSMUST00000028821.10	1673	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCACCTGGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	118087447	118035372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118035656_118052806_118052942_118063384_118063541_118067394_118067506_118070872_118071031_118072123_118072217_118078775_118078873_118080286_118080442_118082119_118082301_118083766_118083900_118087280
ENSMUSG00000027346.16_0	chr2	-	3656	20	FSM	ENSMUSG00000027346.16	ENSMUST00000060955.12	3686	20	25	5	-21	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTTTGGCTTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132420128	132371006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414175_132419987
ENSMUSG00000027346.16_1	chr2	-	3693	20	FSM	ENSMUSG00000027346.16	ENSMUST00000110142.8	3703	20	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCTTTGGCTTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132420162	132371006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132372663_132375993_132376155_132376617_132376754_132377281_132377419_132378604_132378671_132380001_132380064_132381818_132381859_132382204_132382283_132384162_132384256_132386311_132386367_132388760_132388894_132389476_132389640_132392233_132392475_132395876_132396001_132398854_132398897_132400526_132400603_132406546_132406632_132410539_132410637_132414104_132414178_132419987
ENSMUSG00000027349.6_0	chr2	+	1846	8	FSM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTGTCATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117080233	117102020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_117080320_117088114_117088261_117089701_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027349.6_4	chr2	+	1761	7	ISM	ENSMUSG00000027349.6	ENSMUST00000028825.5	1861	8	7894	1	7894	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCACTGTGTCATGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	117088113	117102020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_117088261_117089701_117089837_117090655_117090835_117093319_117093401_117094303_117094421_117098260_117098429_117101086
ENSMUSG00000027351.15_0	chr2	+	5998	7	FSM	ENSMUSG00000027351.15	ENSMUST00000028829.13	6016	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAAAAGGGCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116951862	117012750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_116952238_116983472_116983648_116993978_116994148_116995426_116995477_117002408_117002568_117005824_117005927_117007782
ENSMUSG00000027353.15_0	chr2	+	3174	19	FSM	ENSMUSG00000027353.15	ENSMUST00000028831.15	3179	19	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTTCAGGTCACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132658065	132685815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132658386_132658993_132659166_132659624_132659709_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUSG00000027353.15_1	chr2	+	3339	18	FSM	ENSMUSG00000027353.15	ENSMUST00000066559.6	3397	18	34	24	34	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAATCTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132658094	132686093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132658386_132658993_132659166_132661522_132661606_132661898_132662049_132663264_132663369_132665094_132665294_132666644_132666731_132669386_132669539_132669849_132670046_132673567_132673599_132674682_132674824_132676657_132676800_132680006_132680203_132680625_132680846_132681373_132681584_132682663_132682741_132684522_132684713_132685394
ENSMUSG00000027357.17_0	chr2	+	1921	7	FSM	ENSMUSG00000027357.17	ENSMUST00000028835.13	1924	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGTTGTCCTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	132688588	132708705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132703128_132703215_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027357.17_2	chr2	+	1662	6	FSM	ENSMUSG00000027357.17	ENST00000452938.5	1687	6	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGCTGGAAAAAAATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	132688735	132708679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132689046_132691785_132691924_132696812_132696943_132704254_132704324_132706009_132706102_132707756
ENSMUSG00000027358.7_0	chr2	+	3530	3	FSM	ENSMUSG00000027358.7	ENSMUST00000028836.7	3555	3	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACCTAACCCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	133394092	133404794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_133395272_133396338_133396689_133402793
ENSMUSG00000027359.17_0	chr2	+	2060	9	FSM	ENSMUSG00000027359.17	ENST00000380902.8	2075	9	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAACACTAACATACGA	NA	NA	NA	NA	NA	NA	NA	NA	126395012	126430150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126395553_126403456_126403667_126409666_126409792_126416621_126416817_126419779_126419871_126420768_126420968_126422825_126422924_126428171_126428303_126429679
ENSMUSG00000027360.6_0	chr2	-	2356	12	FSM	ENSMUSG00000027360.6	ENSMUST00000028838.5	2392	12	30	6	-30	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCTAAAATAAAGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	126460568	126435592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095_126458269_126460437
ENSMUSG00000027360.6_1	chr2	-	2130	11	ISM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	2270	3	2270	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTGCAGGCGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126458268	126435687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095
ENSMUSG00000027360.6_2	chr2	-	2202	12	FSM	ENSMUSG00000027360.6	ENST00000267845.8	2213	12	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTTGCAGGCGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126460530	126435687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126436607_126436756_126436859_126439790_126439890_126443533_126443625_126443706_126443870_126444880_126444948_126445761_126445906_126446160_126446296_126448279_126448403_126449216_126449331_126458095_126458269_126460458
ENSMUSG00000027361.16_1	chr2	-	4136	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110425.9	4153	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCTACAGTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	126517478	126469368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_10	chr2	-	2633	9	FSM	ENSMUSG00000027361.16	ENST00000220429.12	2651	9	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTTTCCACATAGCT	NA	NA	NA	NA	NA	NA	NA	NA	126517434	126470848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126472303_126481148_126481265_126488482_126488669_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_16	chr2	-	1381	8	FSM	ENSMUSG00000027361.16	ENST00000429662.6	1400	8	10	9	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATGATTGAATGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126517432	126480944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126481265_126488482_126488669_126491987_126492102_126492407_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027361.16_8	chr2	-	2600	9	FSM	ENSMUSG00000027361.16	ENSMUST00000110424.9	2613	9	9	4	-7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGCTCCATGCAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	126517413	126470836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126472303_126481148_126481265_126488482_126488666_126491987_126492102_126492428_126492541_126494152_126494348_126495474_126495643_126500389_126500498_126517275
ENSMUSG00000027363.16_0	chr2	+	4122	19	FSM	ENSMUSG00000027363.16	ENSMUST00000028841.14	4145	19	9	14	-8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAGAAAAAAATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	126549271	126601203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126549408_126559914_126560085_126561944_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027363.16_7	chr2	+	4139	19	FSM	ENSMUSG00000027363.16	ENSMUST00000110416.3	4154	19	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAGAAAAAAATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	126549287	126601203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126549408_126559914_126560085_126561911_126562090_126567264_126567351_126571079_126571243_126573980_126574024_126575879_126576025_126578268_126578432_126579330_126579476_126579778_126580003_126584043_126584602_126589415_126589497_126590105_126590369_126592899_126593113_126594191_126594403_126596768_126597006_126597892_126598036_126600039_126600173_126600340
ENSMUSG00000027365.15_0	chr2	-	7095	39	FSM	ENSMUSG00000027365.15	ENSMUST00000103224.10	7107	39	9	3	9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTTTAATGAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126718141	126633487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126634877_126637151_126637259_126637362_126637415_126639030_126639237_126639386_126639470_126639581_126639866_126641088_126641155_126641232_126641284_126643042_126643069_126644505_126644541_126646936_126647008_126649208_126649300_126652082_126652151_126654615_126655329_126656607_126656741_126658679_126658865_126661756_126661884_126663083_126663259_126664389_126664669_126665895_126666025_126667331_126667476_126667553_126667710_126668634_126668864_126670929_126671211_126672048_126672184_126673116_126673258_126675607_126675662_126677375_126677511_126679254_126679356_126682663_126682737_126684775_126684900_126686219_126686395_126687993_126688166_126690416_126690542_126691818_126692033_126693262_126693462_126696562_126696602_126700332_126700413_126717893
ENSMUSG00000027366.13_0	chr2	-	5590	15	FSM	ENSMUSG00000027366.13	ENSMUST00000028844.11	5616	15	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAAAATAAAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	126775145	126732326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126736207_126746829_126746991_126750025_126750101_126754562_126754666_126755451_126755509_126759130_126759206_126759719_126759802_126761558_126761661_126762237_126762335_126765375_126765528_126767665_126767800_126768207_126768298_126768736_126768920_126769668_126769789_126774866
ENSMUSG00000027367.17_0	chr2	+	3100	8	FSM	ENSMUSG00000027367.17	ENSMUST00000110375.9	3116	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTACAGAAGAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127112158	127140846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127112801_127126014_127126224_127126451_127126502_127132691_127132803_127132877_127132961_127134070_127134171_127137403_127137489_127139026
ENSMUSG00000027368.7_0	chr2	+	1598	4	FSM	ENSMUSG00000027368.7	ENSMUST00000028846.7	1617	4	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAGCAGTACCACAT	NA	NA	NA	NA	NA	NA	NA	NA	127178084	127180283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127178558_127178696_127178819_127179168_127179389_127179500
ENSMUSG00000027371.11_0	chr2	-	1189	8	FSM	ENSMUSG00000027371.11	ENSMUST00000028848.4	1211	8	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCAGTTTAGCTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	127286455	127278141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127278327_127278465_127278554_127278656_127278766_127280032_127280193_127280429_127280490_127282305_127282523_127283793_127284045_127286336
ENSMUSG00000027374.13_0	chr2	+	4465	12	FSM	ENSMUSG00000027374.13	ENSMUST00000028852.13	4481	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATTGTCTTCCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	127429151	127448743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127429406_127432614_127432702_127433733_127433872_127436363_127436490_127437583_127437818_127438819_127438855_127440105_127440197_127441931_127441979_127442748_127442807_127443297_127443361_127444304_127444442_127445548
ENSMUSG00000027375.15_0	chr2	-	164	1	ISM	ENSMUSG00000027375.15	ENSMUST00000028854.15	2778	4	21641	1665	21079	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAACAAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127476974	127476810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_127476800_127477000
ENSMUSG00000027375.15_1	chr2	-	250	2	FSM	ENSMUSG00000027375.15	ENST00000349807.3	271	2	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAGAAAACAAGCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	127498046	127476810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127476975_127497960
ENSMUSG00000027376.16_0	chr2	-	2771	24	FSM	ENSMUSG00000027376.16	ENST00000317620.14	2779	24	8	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTTCTCTAGCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	127383377	127370409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127370525_127370665_127370739_127371051_127371159_127371319_127371410_127372039_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027376.16_16	chr2	-	2631	23	FSM	ENSMUSG00000027376.16	ENST00000317668.8	2651	23	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTATAGAACCCACCGGT	NA	NA	NA	NA	NA	NA	NA	NA	127383370	127370683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127370739_127371051_127371159_127371319_127371410_127372039_127372100_127372272_127372365_127372623_127372678_127373024_127373118_127373728_127373801_127374656_127374804_127376744_127376830_127376966_127377059_127377464_127377589_127378462_127378616_127378875_127379036_127379249_127379314_127380177_127380253_127380581_127380788_127381102_127381193_127381442_127381507_127381696_127381818_127381915_127382119_127382431_127382482_127382996
ENSMUSG00000027378.17_0	chr2	-	2248	20	FSM	ENSMUSG00000027378.17	ENSMUST00000028857.14	2260	20	2	10	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGAACATTGTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	127630772	127582661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608042_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ENSMUSG00000027378.17_1	chr2	-	2280	20	FSM	ENSMUSG00000027378.17	ENSMUST00000110357.2	2296	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGAACATTGTTATATC	NA	NA	NA	NA	NA	NA	NA	NA	127630807	127582661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610179_127611534_127611578_127612178_127612313_127614020_127614123_127615817_127616020_127619188_127619314_127621023_127621085_127621982_127622057_127630705
ENSMUSG00000027378.17_16	chr2	-	1229	12	ISM	ENSMUSG00000027378.17	ENST00000355301.8	1295	13	1412	13	1412	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGAAAGAACTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	127610167	127582858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090
ENSMUSG00000027378.17_17	chr2	-	1282	13	FSM	ENSMUSG00000027378.17	ENST00000355301.8	1295	13	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGAAAGAACTCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	127611579	127582858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127583109_127584991_127585037_127587815_127587890_127589919_127590033_127595892_127595993_127598011_127598089_127599598_127599682_127601495_127601607_127603081_127603157_127605698_127605828_127607943_127608039_127610090_127610176_127611534
ENSMUSG00000027379.14_0	chr2	-	3405	25	FSM	ENSMUSG00000027379.14	ENSMUST00000028858.8	3421	25	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACCCATGTGACCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	127673777	127643049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127643359_127644937_127645045_127646101_127646271_127646393_127646552_127646728_127646891_127647199_127647316_127648145_127648290_127649728_127649932_127650886_127650975_127652528_127652704_127654867_127654950_127655748_127655846_127656557_127656669_127656758_127656888_127658008_127658068_127659171_127659399_127661132_127661285_127663594_127663780_127663861_127663915_127665878_127665980_127667026_127667071_127669220_127669418_127671357_127671497_127671597_127671658_127673639
ENSMUSG00000027381.17_0	chr2	+	5027	4	FSM	ENSMUSG00000027381.17	ENSMUST00000110341.9	5036	4	8	1	-3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTGTTCGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	127967966	128004466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127968173_127970539_127970935_127989004_127989115_128000150
ENSMUSG00000027384.7_0	chr2	+	1144	11	FSM	ENSMUSG00000027384.7	ENSMUST00000044825.5	1166	11	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAAACTAGTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	140012578	140045597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_140012854_140013946_140013988_140019153_140019218_140023493_140023542_140025817_140025922_140029663_140029704_140030634_140030833_140035502_140035564_140044785_140044870_140045207_140045291_140045451
ENSMUSG00000027386.10_0	chr2	+	3209	9	FSM	ENSMUSG00000027386.10	ENSMUST00000110324.8	3228	9	15	4	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTTGTGTTTCTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	128704915	128738950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128705220_128705851_128706068_128719279_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737136
ENSMUSG00000027386.10_3	chr2	+	2881	8	FSM	ENSMUSG00000027386.10	ENSMUST00000028864.3	2905	8	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATGTTCAGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	128705863	128738938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128706068_128719279_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737136
ENSMUSG00000027386.10_4	chr2	+	1046	7	FSM	ENSMUSG00000027386.10	ENST00000409903.5	1061	7	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACACATTGTGGGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	128719285	128737566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128719440_128722175_128722347_128731620_128731747_128734362_128734504_128735686_128735825_128736685_128736825_128737389
ENSMUSG00000027387.12_0	chr2	-	1616	9	FSM	ENSMUSG00000027387.12	ENSMUST00000028866.9	1624	9	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTGTTTTCATACTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128785990	128768188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128768732_128770806_128770849_128771766_128771877_128772711_128772824_128773197_128773321_128775118_128775253_128777231_128777467_128781762_128781857_128785767
ENSMUSG00000027394.14_0	chr2	+	4550	7	FSM	ENSMUSG00000027394.14	ENSMUST00000035812.14	4567	7	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGGTCCTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	128907878	128938203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128908224_128910774_128910854_128917775_128918009_128923129_128923266_128923893_128924164_128930913_128931058_128934860
ENSMUSG00000027395.16_0	chr2	+	3985	15	FSM	ENSMUSG00000027395.16	ENSMUST00000103205.11	3998	15	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATATGTGTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128942922	128968509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128943184_128944882_128945051_128945497_128945645_128947168_128947302_128949906_128950044_128951150_128951375_128951959_128952132_128954561_128954734_128955420_128955703_128957558_128957693_128959847_128960019_128960959_128961117_128964989_128965187_128965630_128965885_128967133
ENSMUSG00000027397.15_0	chr2	+	3293	11	FSM	ENSMUSG00000027397.15	ENSMUST00000028880.10	3316	11	15	8	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTTCTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	129040698	129053528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129040913_129041368_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUSG00000027397.15_5	chr2	+	3209	10	FSM	ENSMUSG00000027397.15	ENSMUST00000110315.2	3219	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAATTTCTCTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	129041238	129053528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129041985_129042102_129042244_129042419_129042506_129045978_129046076_129048286_129048407_129049529_129049797_129049900_129050460_129050960_129051144_129051791_129051877_129052603
ENSMUSG00000027399.2_0	chr2	-	1142	4	FSM	ENSMUSG00000027399.2	ENST00000263339.4	1148	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCGCAGCAGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129151031	129141977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_129142785_129148383_129148613_129149802_129149852_129150974
ENSMUSG00000027399.2_1	chr2	-	1082	3	ISM	ENSMUSG00000027399.2	ENST00000263339.4	1148	4	1183	6	1183	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCGCAGCAGGGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129149848	129141977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_129142785_129148383_129148613_129149802
ENSMUSG00000027400.12_0	chr2	-	824	3	FSM	ENSMUSG00000027400.12	ENST00000217305.3	835	3	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATAACACTTCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	129540415	129529921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_129530536_129531656_129531798_129540346
ENSMUSG00000027400.12_1	chr2	-	749	2	ISM	ENSMUSG00000027400.12	ENST00000217305.3	835	3	8627	8	8627	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATAACACTTCCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	129531791	129529921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_129530536_129531656
ENSMUSG00000027401.10_0	chr2	+	4130	13	FSM	ENSMUSG00000027401.10	ENSMUST00000110299.3	4135	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCACTGATGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	129854268	129892314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129854330_129865608_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871544_129871723_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
ENSMUSG00000027401.10_1	chr2	+	4068	12	ISM	ENSMUSG00000027401.10	ENSMUST00000110299.3	4135	13	11341	5	11341	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCACTGATGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	129865609	129892314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_129865783_129866264_129866505_129867177_129867297_129868604_129868734_129871544_129871723_129871820_129871957_129879392_129879497_129880282_129880529_129883676_129883986_129886422_129886581_129889607_129889742_129890172
ENSMUSG00000027403.13_0	chr2	+	1984	11	FSM	ENSMUSG00000027403.13	ENST00000381423.1	2000	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAACTGGGGAGGACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129977674	129995042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129977844_129978348_129978592_129979295_129979415_129980747_129980877_129983084_129983263_129983692_129983832_129985120_129985225_129985291_129985535_129986869_129987212_129993193_129993349_129994879
ENSMUSG00000027404.17_0	chr2	-	1144	7	FSM	ENSMUSG00000027404.17	ENSMUST00000103199.9	1161	7	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	6521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGATATATTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	130021314	130013562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130013864_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934_130019087_130021153
ENSMUSG00000027404.17_5	chr2	-	807	6	FSM	ENSMUSG00000027404.17	ENST00000438552.6	831	6	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAACTAAGAGACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	130019077	130013587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130013722_130014522_130014649_130014955_130015095_130015526_130015680_130017249_130017362_130018934
ENSMUSG00000027404.17_6	chr2	-	243	2	FSM	ENSMUSG00000027404.17	ENST00000461548.1	257	2	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCCTCTGACCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	130019077	130018572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130018673_130018934
ENSMUSG00000027405.17_0	chr2	+	1866	12	FSM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATAGTATGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	130116349	130121222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130116397_130116553_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027405.17_25	chr2	+	1815	11	ISM	ENSMUSG00000027405.17	ENSMUST00000103198.11	1877	12	211	8	186	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTATGTGTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	130116560	130121225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_130116644_130116951_130117067_130117582_130117745_130117895_130118095_130118355_130118544_130118626_130118779_130118951_130119053_130119395_130119545_130119768_130119891_130120075_130120211_130120816
ENSMUSG00000027406.14_0	chr2	-	1595	12	FSM	ENSMUSG00000027406.14	ENSMUST00000028892.11	1616	12	11	10	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATACTATCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	130126456	130121238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130121647_130122182_130122244_130122376_130122472_130122875_130123023_130123132_130123236_130123326_130123461_130123557_130123691_130123767_130123829_130125628_130125750_130125857_130125957_130126090_130126169_130126301
ENSMUSG00000027408.8_0	chr2	-	2355	14	FSM	ENSMUSG00000027408.8	ENSMUST00000028897.8	2366	14	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCCTCTTGAGTTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	130239486	130232697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130233063_130233157_130233261_130234990_130235131_130235303_130235602_130235685_130235866_130235951_130236149_130236229_130236354_130236656_130236746_130236841_130236993_130237555_130237644_130237748_130237889_130238027_130238138_130238250_130238413_130239278
ENSMUSG00000027411.18_0	chr2	+	2141	20	FSM	ENSMUSG00000027411.18	ENST00000380469.7	2161	20	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGAGCCTGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	130266255	130285572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_11	chr2	+	3150	24	FSM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAAACCTAGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	130266290	130286184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130266368_130279541_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027411.18_29	chr2	+	3072	23	ISM	ENSMUSG00000027411.18	ENSMUST00000028900.11	3161	24	13255	8	13255	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATTTGAAACCTAGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	130279539	130286181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_130279631_130279834_130279933_130280016_130280146_130280226_130280372_130280488_130280605_130280702_130280826_130280965_130281022_130281355_130281446_130281539_130281635_130281760_130281838_130282150_130282283_130282371_130282500_130282626_130282663_130282819_130282929_130283084_130283220_130283314_130283424_130283527_130283626_130283713_130283822_130284092_130284171_130284254_130284425_130284506_130284604_130285215_130285320_130285433
ENSMUSG00000027412.13_0	chr2	+	3451	20	FSM	ENSMUSG00000027412.13	ENSMUST00000109456.9	3470	20	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTTTAAGAAGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	160722600	160747909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160722717_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUSG00000027412.13_1	chr2	+	3432	20	FSM	ENSMUSG00000027412.13	ENSMUST00000040872.13	3458	20	13	13	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTTTAAGAAGGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	160730040	160747909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743577_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUSG00000027412.13_3	chr2	+	3212	20	FSM	ENSMUSG00000027412.13	ENSMUST00000109457.3	3215	20	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTAGGCCATTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	160730093	160747712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160730138_160733915_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743547_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUSG00000027412.13_5	chr2	+	3150	19	ISM	ENSMUSG00000027412.13	ENSMUST00000109457.3	3215	20	3843	0	3843	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTAGGCCATTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	160733933	160747712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_160734309_160735913_160736010_160737242_160737494_160737670_160737752_160738669_160738791_160738934_160739287_160740549_160740650_160740788_160740950_160741489_160741584_160741679_160741750_160743547_160743671_160743752_160743797_160744482_160744622_160745522_160745672_160745843_160745931_160746402_160746556_160746719_160746835_160746922_160747027_160747177
ENSMUSG00000027419.10_0	chr2	+	2287	11	FSM	ENSMUSG00000027419.10	ENST00000536609.1	2307	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACATCTATGTCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	143388140	143655939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_143388585_143529483_143529598_143532246_143532356_143538576_143538615_143591044_143591122_143615820_143615910_143626447_143626624_143635008_143635225_143637863_143637965_143642923_143643152_143655244
ENSMUSG00000027422.16_0	chr2	-	5168	24	FSM	ENSMUSG00000027422.16	ENSMUST00000016072.12	5177	24	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTTCTGTCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	143853175	143789315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_143789850_143790255_143790400_143791189_143791289_143791591_143791676_143792347_143792444_143794111_143794196_143795153_143795250_143795861_143795934_143796035_143796129_143796654_143796745_143796876_143796958_143797033_143797127_143798687_143798781_143799474_143799566_143805023_143805059_143805165_143805336_143806681_143806821_143809359_143809514_143810436_143810556_143811329_143811483_143815388_143815512_143816380_143816530_143830067_143832187_143852918
ENSMUSG00000027422.16_18	chr2	-	2686	3	FSM	ENSMUSG00000027422.16	ENSMUST00000037875.6	2701	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAATCCAGGAAGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	143853173	143827777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_143828090_143830067_143832187_143852918
ENSMUSG00000027423.16_0	chr2	-	2405	13	FSM	ENSMUSG00000027423.16	ENSMUST00000028909.5	2419	13	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAAGTCTGGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	144112486	144092050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296
ENSMUSG00000027423.16_1	chr2	-	2494	14	FSM	ENSMUSG00000027423.16	ENSMUST00000110030.10	2512	14	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAAAGTCTGGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	144112816	144092050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_144093153_144094364_144094451_144095581_144095742_144096645_144096733_144096822_144096863_144097259_144097336_144097418_144097525_144099019_144099116_144099789_144099914_144100976_144101099_144102644_144102756_144103839_144103945_144112296_144112380_144112620
ENSMUSG00000027424.12_0	chr2	+	2281	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110028.8	2308	5	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTCCTAGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	144112602	144122429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144112935_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_1	chr2	+	2827	5	FSM	ENSMUSG00000027424.12	ENSMUST00000028910.9	2840	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGGTGTATTTATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	144112832	144123147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144112993_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027424.12_3	chr2	+	2339	5	FSM	ENSMUSG00000027424.12	ENSMUST00000110027.2	2359	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATTCCTAGTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	144112873	144122429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144113264_144113834_144114405_144118234_144118452_144120913_144121047_144121400
ENSMUSG00000027425.19_0	chr2	+	3783	11	FSM	ENSMUSG00000027425.19	ENSMUST00000028911.15	3801	11	13	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTTGCACTCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	144210915	144249591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144211078_144215110_144215776_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ENSMUSG00000027425.19_3	chr2	+	3286	11	FSM	ENSMUSG00000027425.19	ENSMUST00000147747.8	3299	11	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTTGCACTCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	144210926	144249591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144211078_144215110_144215290_144217764_144217884_144222626_144222749_144231094_144231277_144235223_144235641_144235735_144236299_144242605_144242743_144244314_144244491_144245918_144246110_144248542
ENSMUSG00000027427.14_0	chr2	+	4389	9	FSM	ENSMUSG00000027427.14	ENSMUST00000028914.9	4403	9	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATAACTTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	144369641	144383905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144376218_144376332_144377860_144378005_144378202_144378311_144379085_144379278_144380531
ENSMUSG00000027427.14_2	chr2	+	1620	5	FSM	ENSMUSG00000027427.14	ENSMUST00000110017.3	1632	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATATAACCAAAAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	144369670	144377084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144369846_144370622_144370741_144374273_144374342_144375077_144375146_144375893
ENSMUSG00000027428.10_0	chr2	-	2158	5	FSM	ENSMUSG00000027428.10	ENSMUST00000028915.6	2170	5	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATCTTCTGACTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	144392781	144384188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_144385930_144386293_144386380_144389913_144390020_144391023_144391067_144392599
ENSMUSG00000027429.17_0	chr2	+	2763	20	FSM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	144398178	144432656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144398263_144401126_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027429.17_18	chr2	+	2575	19	FSM	ENSMUSG00000027429.17	ENST00000643747.1	2592	19	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGATCATAAAGGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	144401132	144432612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408736_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027429.17_26	chr2	+	2681	19	ISM	ENSMUSG00000027429.17	ENSMUST00000028916.15	2779	20	2949	13	0	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAATACTAATGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	144401124	144432656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_144401362_144404051_144404110_144406485_144406573_144408682_144408920_144409020_144409107_144409802_144409948_144410535_144410695_144411019_144411136_144414398_144414523_144416586_144416668_144420251_144420342_144421216_144421324_144423863_144424018_144425610_144425689_144427517_144427680_144428293_144428381_144428785_144428942_144429421_144429488_144432205
ENSMUSG00000027430.13_0	chr2	+	1339	6	FSM	ENSMUSG00000027430.13	ENSMUST00000028917.7	1350	6	9	2	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGTTTTCTGTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	144441825	144610676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144442012_144445707_144445799_144459111_144459348_144477677_144477785_144588820_144588994_144610130
ENSMUSG00000027433.6_0	chr2	+	3415	30	FSM	ENSMUSG00000027433.6	ENSMUST00000028921.6	3434	30	7	12	7	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	1602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTAAAAATGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	146854922	146919908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_146855117_146866427_146866556_146866634_146866747_146867114_146867227_146868300_146868360_146868434_146868525_146869226_146869300_146869514_146869566_146870012_146870171_146871257_146871333_146871414_146871549_146871646_146871705_146871788_146871897_146876773_146876819_146878583_146878716_146880088_146880208_146882735_146882872_146883907_146884016_146884093_146884184_146884779_146884853_146889554_146889639_146891211_146891310_146891902_146891983_146893632_146893690_146903168_146903238_146903325_146903458_146905152_146905281_146910711_146910776_146916804_146916947_146919402
ENSMUSG00000027434.12_0	chr2	-	2098	2	FSM	ENSMUSG00000027434.12	ENSMUST00000067075.7	2120	2	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAACAAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	147028318	147025018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_147026478_147027679
ENSMUSG00000027438.15_0	chr2	-	4396	11	FSM	ENSMUSG00000027438.15	ENSMUST00000028926.13	4412	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGTAACCTTTTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	148574379	148535912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148551236_148551354_148554594_148554675_148574185
ENSMUSG00000027438.15_2	chr2	-	1612	10	FSM	ENSMUSG00000027438.15	ENST00000432543.6	1629	10	11	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGCCTTAAACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	148574381	148538581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148549078_148549126_148554594_148554675_148574185
ENSMUSG00000027438.15_3	chr2	-	1686	10	FSM	ENSMUSG00000027438.15	ENST00000398425.7	1699	10	7	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGCCTTAAACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	148574385	148538581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_148539427_148540102_148540154_148540850_148540920_148542292_148542398_148544980_148545066_148545189_148545246_148548865_148548944_148551236_148551354_148554594_148554675_148574185
ENSMUSG00000027439.10_0	chr2	+	4224	6	FSM	ENSMUSG00000027439.10	ENSMUST00000028928.8	4232	6	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTCTGCTTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	148522948	148534867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_148523136_148525513_148526889_148528433_148528529_148529923_148530092_148531995_148532154_148532626
ENSMUSG00000027445.4_0	chr2	+	668	3	FSM	ENSMUSG00000027445.4	ENSMUST00000028935.4	687	3	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTTTGTGTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	148677082	148680655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_148677353_148678593_148678708_148680371
ENSMUSG00000027447.7_0	chr2	-	850	3	FSM	ENSMUSG00000027447.7	ENSMUST00000028938.7	860	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGAGTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	148717486	148713641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_148713964_148714736_148714851_148717072
ENSMUSG00000027454.11_0	chr2	+	1075	7	FSM	ENSMUSG00000027454.11	ENSMUST00000028948.5	1087	7	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGGGAATCTCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	150751521	150773196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150751714_150754700_150754766_150758055_150758155_150759788_150759880_150767801_150767919_150769961_150770037_150772760
ENSMUSG00000027455.17_0	chr2	+	1453	9	FSM	ENSMUSG00000027455.17	ENSMUST00000028949.16	1364	9	-95	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATACTACCAATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	151336117	151353219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151336333_151338503_151338602_151342634_151342710_151344933_151345100_151346030_151346124_151347272_151347383_151348166_151348305_151351428_151351594_151352826
ENSMUSG00000027456.9_0	chr2	+	1377	9	FSM	ENSMUSG00000027456.9	ENSMUST00000028950.9	1399	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCCCCGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	151414555	151431917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151414625_151424612_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ENSMUSG00000027456.9_1	chr2	+	1302	8	ISM	ENSMUSG00000027456.9	ENSMUST00000028950.9	1399	9	10073	12	10073	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAACCCAGCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	151424614	151431913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_151424686_151425853_151425924_151426728_151426830_151428246_151428406_151428986_151429163_151429241_151429414_151431124_151431217_151431452
ENSMUSG00000027459.17_0	chr2	-	1743	2	FSM	ENSMUSG00000027459.17	ENSMUST00000062047.6	1754	2	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGACTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	151822130	151811319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_151812845_151821912
ENSMUSG00000027460.8_0	chr2	+	2318	9	FSM	ENSMUSG00000027460.8	ENSMUST00000028955.6	2335	9	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCAGGACTTGTCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	151753139	151787250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151753588_151767306_151767463_151768983_151769106_151771299_151771539_151776326_151776443_151778586_151778689_151780824_151780992_151785223_151785355_151786413
ENSMUSG00000027463.15_0	chr2	+	1105	2	FSM	ENSMUSG00000027463.15	ENST00000675066.1	1122	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCCCAAATGCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	151846050	151847986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151846632_151847462
ENSMUSG00000027463.15_1	chr2	+	1381	4	FSM	ENSMUSG00000027463.15	ENST00000645534.1	1395	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCCGTGTAGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	151846050	151850064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151846632_151847462_151847940_151849400_151849525_151849865
ENSMUSG00000027465.14_0	chr2	+	3371	8	FSM	ENSMUSG00000027465.14	ENSMUST00000028963.14	3386	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACTTGTCTTTGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	152135758	152155912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152135961_152144071_152144258_152146865_152146947_152149908_152150096_152150249_152150352_152152305_152152448_152153236_152153425_152153629
ENSMUSG00000027466.16_0	chr2	-	2369	12	FSM	ENSMUSG00000027466.16	ENSMUST00000109847.9	2384	12	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAAGGTGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	152174321	152158257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027466.16_4	chr2	-	2238	13	FSM	ENSMUSG00000027466.16	ENSMUST00000028964.14	2252	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGGAAAGGTGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	152174563	152158257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953_152174043_152174415
ENSMUSG00000027466.16_8	chr2	-	1807	11	FSM	ENSMUSG00000027466.16	ENST00000353660.7	1830	11	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTATAGCAGTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	152174365	152158718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152165091_152165253_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152173953
ENSMUSG00000027466.16_9	chr2	-	1797	11	FSM	ENSMUSG00000027466.16	ENST00000640614.1	1814	11	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTATAGCAGTGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	152174371	152158718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152158835_152160231_152160376_152160632_152160732_152161043_152161224_152164079_152164192_152166186_152166361_152166444_152166561_152168135_152168335_152169166_152169261_152172879_152173025_152173953
ENSMUSG00000027469.17_0	chr2	+	4349	18	FSM	ENSMUSG00000027469.17	ENSMUST00000164120.8	4365	18	14	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	152689897	152737239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152690218_152696840_152696936_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027469.17_14	chr2	+	3647	18	FSM	ENSMUSG00000027469.17	ENSMUST00000028969.9	3654	18	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTCTTGTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	152689920	152736573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152690218_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027469.17_3	chr2	+	3472	18	FSM	ENSMUSG00000027469.17	ENSMUST00000109816.8	3483	18	10	1	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGCTCTTGTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	152689907	152736573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152690030_152696840_152696923_152709103_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027469.17_4	chr2	+	4145	18	FSM	ENSMUSG00000027469.17	ENSMUST00000178997.8	4161	18	14	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	152689897	152737239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152690030_152696840_152696923_152709106_152709278_152711572_152711696_152715009_152715137_152717460_152717593_152718486_152718613_152722023_152722146_152722934_152723087_152724113_152724283_152726093_152726233_152726930_152727148_152730022_152730116_152731065_152731243_152732410_152732558_152733362_152733475_152734032_152734221_152735503
ENSMUSG00000027470.10_0	chr2	+	2938	12	FSM	ENSMUSG00000027470.10	ENSMUST00000028970.8	2951	12	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAAGTTACTGCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	152753277	152764981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152753520_152753959_152754435_152755364_152755661_152757049_152757156_152757576_152757671_152759253_152759364_152759444_152759587_152761068_152761140_152761244_152761374_152762205_152762359_152762440_152762574_152763994
ENSMUSG00000027472.15_0	chr2	-	1253	5	FSM	ENSMUSG00000027472.15	ENSMUST00000028972.9	1273	5	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACAACAGCTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	152857338	152850820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152851657_152852177_152852259_152854300_152854376_152855929_152856006_152857153
ENSMUSG00000027475.10_0	chr2	+	5618	9	FSM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACAAAGAGGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	153133340	153175301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153133425_153158136_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ENSMUSG00000027475.10_1	chr2	+	5536	8	ISM	ENSMUSG00000027475.10	ENSMUST00000028977.7	5635	9	24802	9	24802	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACAAAGAGGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	153158134	153175301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_153159605_153162194_153162297_153162498_153162622_153162703_153162823_153164731_153164846_153165456_153165563_153171491_153171671_153171978
ENSMUSG00000027478.16_0	chr2	+	3931	20	FSM	ENSMUSG00000027478.16	ENSMUST00000103151.8	3956	20	21	4	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	153491393	153529646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153491661_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ENSMUSG00000027478.16_1	chr2	+	4064	21	FSM	ENSMUSG00000027478.16	ENSMUST00000103150.10	4070	21	2	4	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACGTGCTGTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	153491375	153529646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153491661_153492704_153492820_153503344_153503523_153504062_153504125_153504633_153504754_153507171_153507298_153507826_153508022_153509423_153509583_153511667_153511776_153512222_153512368_153514135_153514256_153514415_153514461_153515906_153515987_153516268_153516382_153516777_153516965_153517648_153517734_153518615_153518762_153519090_153519182_153519430_153519580_153520390_153520477_153528177
ENSMUSG00000027479.15_0	chr2	+	7324	7	FSM	ENSMUSG00000027479.15	ENSMUST00000028981.9	7336	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAAATGGCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	153583203	153615228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153583340_153588175_153588300_153597850_153597997_153599844_153600053_153603455_153603578_153606866_153607020_153608793
ENSMUSG00000027482.13_0	chr2	+	747	5	FSM	ENSMUSG00000027482.13	ENST00000375452.3	765	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCTAGTAGGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	153972272	153979548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153972583_153975558_153975710_153978185_153978336_153979034_153979120_153979497
ENSMUSG00000027485.16_0	chr2	+	1637	16	FSM	ENSMUSG00000027485.16	ENSMUST00000028987.7	1637	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTGTCCGGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154042298	154062263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154042339_154044492_154044650_154046596_154046736_154047338_154047447_154048328_154048479_154049009_154049092_154051790_154051855_154053417_154053504_154054853_154055034_154055384_154055439_154055913_154056073_154057180_154057249_154058135_154058182_154059090_154059155_154060123_154060201_154062100
ENSMUSG00000027485.16_1	chr2	+	1582	15	ISM	ENSMUSG00000027485.16	ENSMUST00000028987.7	1637	16	2209	0	2209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGTTGTCCGGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154044507	154062263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_154044650_154046596_154046736_154047338_154047447_154048328_154048479_154049009_154049092_154051790_154051855_154053417_154053504_154054853_154055034_154055384_154055439_154055913_154056073_154057180_154057249_154058135_154058182_154059090_154059155_154060123_154060201_154062100
ENSMUSG00000027487.12_0	chr2	-	2154	15	FSM	ENSMUSG00000027487.12	ENSMUST00000109731.8	2160	15	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGCTTCCTTGTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	154214930	154177305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600_154214775_154214881
ENSMUSG00000027487.12_1	chr2	-	2089	14	FSM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	-124	5	-112	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAATGGCTTCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	154214763	154177310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555_154212876_154214600
ENSMUSG00000027487.12_10	chr2	-	1923	13	ISM	ENSMUSG00000027487.12	ENSMUST00000028990.10	1970	14	1765	7	1765	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTAATGGCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	154212874	154177312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_154177538_154184220_154184362_154187785_154187936_154190570_154190702_154192737_154192794_154194101_154194200_154195109_154195341_154196009_154196131_154202476_154202688_154207881_154207983_154210133_154210169_154210731_154210836_154212555
ENSMUSG00000027488.13_0	chr2	-	2122	8	FSM	ENSMUSG00000027488.13	ENSMUST00000109728.8	2131	8	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154250011	154218233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154218829_154218926_154219115_154219927_154220125_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ENSMUSG00000027488.13_1	chr2	-	2110	8	FSM	ENSMUSG00000027488.13	ENSMUST00000028991.7	2125	8	14	1	14	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCATGTCTGTGGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	154249987	154218233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154218829_154218926_154219115_154219927_154220137_154222593_154222725_154222830_154223039_154225699_154225905_154245641_154245828_154249599
ENSMUSG00000027489.16_0	chr2	-	1709	10	FSM	ENSMUSG00000027489.16	ENST00000246190.11	1731	10	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAATAAAGCTGGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	154397602	154386351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819_154396846_154397503
ENSMUSG00000027489.16_1	chr2	-	1606	9	ISM	ENSMUSG00000027489.16	ENST00000246190.11	1731	10	768	15	768	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGGCAATAAAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	154396845	154386355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_154387088_154387174_154387267_154387945_154388024_154388147_154388261_154388589_154388801_154388956_154389076_154389344_154389482_154396566_154396665_154396819
ENSMUSG00000027490.18_0	chr2	-	2710	7	FSM	ENSMUSG00000027490.18	ENSMUST00000103145.11	2732	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTGAACTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154411798	154401334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154411408
ENSMUSG00000027490.18_5	chr2	-	2738	7	FSM	ENSMUSG00000027490.18	ENSMUST00000000894.6	2755	7	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGGTTTGAAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	154411623	154401553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154402856_154402950_154403171_154403266_154403382_154404857_154405011_154405814_154406035_154406337_154406429_154410986
ENSMUSG00000027495.5_0	chr2	+	3605	3	FSM	ENSMUSG00000027495.5	ENSMUST00000028995.5	3617	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTCTGCGGTCTGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	172187489	172197662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172187768_172193374_172193545_172194505
ENSMUSG00000027496.16_0	chr2	-	1786	8	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	1480	1	1480	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	172210946	172198116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905
ENSMUSG00000027496.16_1	chr2	-	1853	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109140.10	1862	9	2	7	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	172212453	172198116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212392
ENSMUSG00000027496.16_2	chr2	-	1747	7	ISM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	3333	1	3333	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGAGTACGTGGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	172209093	172198116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841
ENSMUSG00000027496.16_3	chr2	-	1885	9	FSM	ENSMUSG00000027496.16	ENSMUST00000109139.8	1905	9	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCTACCTGGAGTACGT	NA	NA	NA	NA	NA	NA	NA	NA	172212414	172198123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_172198902_172199000_172199176_172201674_172201824_172204694_172204834_172205517_172205710_172206361_172206417_172208841_172209092_172210905_172210953_172212314
ENSMUSG00000027498.15_0	chr2	+	3428	6	FSM	ENSMUSG00000027498.15	ENSMUST00000116375.2	3451	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGTGACGTGACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	172212667	172224359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172212948_172214848_172215050_172217557_172217836_172217971_172218170_172219535_172219927_172222279
ENSMUSG00000027499.13_0	chr3	+	3611	3	FSM	ENSMUSG00000027499.13	ENSMUST00000028999.12	3617	3	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTCTCTCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7431732	7510423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_7431813_7502397_7502576_7507070
ENSMUSG00000027499.13_1	chr3	+	3530	2	ISM	ENSMUSG00000027499.13	ENSMUST00000193330.2	631	3	8281	-2950	8281	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTCTCTCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7502398	7510423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_7502576_7507070
ENSMUSG00000027500.11_0	chr3	+	2059	5	FSM	ENSMUSG00000027500.11	ENSMUST00000029002.9	2073	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATAACGGTTTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	8574427	8626660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_8574691_8606900_8606997_8610632_8610806_8619851_8620044_8625325
ENSMUSG00000027502.12_0	chr2	+	2153	9	FSM	ENSMUSG00000027502.12	ENSMUST00000029005.4	2173	9	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATATTTGGGGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	172282486	172311819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308193_172308252_172308348_172308445_172310515
ENSMUSG00000027502.12_5	chr2	+	863	8	FSM	ENSMUSG00000027502.12	ENST00000395881.7	870	8	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGGACCGGGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	172282592	172310693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172282660_172286566_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308348_172308445_172310515
ENSMUSG00000027502.12_9	chr2	+	795	7	ISM	ENSMUSG00000027502.12	ENST00000395881.7	870	8	3978	4	3978	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGGGACCGGGCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	172286567	172310693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_172286662_172287246_172287341_172288541_172288682_172288954_172289034_172305096_172305211_172308348_172308445_172310515
ENSMUSG00000027506.16_0	chr3	-	6303	6	FSM	ENSMUSG00000027506.16	ENSMUST00000120143.8	6317	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATCTCCACTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	9069774	8990657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_8996235_9000051_9000101_9009670_9009773_9012540_9012690_9018743_9018860_9069464
ENSMUSG00000027509.12_0	chr2	+	1721	12	FSM	ENSMUSG00000027509.12	ENSMUST00000029013.10	1742	12	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATAATGCTATGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	172841921	172857523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172842170_172844451_172844547_172845299_172845405_172846952_172847046_172848673_172848761_172849852_172849940_172850036_172850109_172851162_172851271_172853792_172853900_172853972_172854049_172854419_172854615_172857075
ENSMUSG00000027510.18_0	chr2	+	2059	5	FSM	ENSMUSG00000027510.18	ENSMUST00000173393.8	2071	5	3	9	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	172862293	172876518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172862355_172863464_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUSG00000027510.18_2	chr2	+	1768	4	FSM	ENSMUSG00000027510.18	ENSMUST00000029014.16	1768	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAAAGGTGGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	172863694	172876518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172864064_172864584_172864709_172865119_172865175_172875298
ENSMUSG00000027510.18_3	chr2	+	543	3	FSM	ENSMUSG00000027510.18	ENST00000440234.6	553	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCTGCAGCCACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	172863812	172875466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172864064_172864584_172864709_172875298
ENSMUSG00000027519.11_0	chr2	+	7142	7	FSM	ENSMUSG00000027519.11	ENSMUST00000029024.10	7155	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTTCTCTGTGGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	173501559	173549130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173501935_173503224_173503305_173529939_173530022_173536902_173536975_173537051_173537159_173537682_173537793_173542814
ENSMUSG00000027520.17_0	chr1	+	2359	5	FSM	ENSMUSG00000027520.17	ENST00000650097.1	2372	5	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTAATGTCCCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	63319935	63344209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_63320037_63334074_63334219_63341845_63342763_63342841_63343931_63344101
ENSMUSG00000027522.16_0	chr2	+	3847	9	FSM	ENSMUSG00000027522.16	ENSMUST00000087908.10	3865	9	7	11	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAAGAGCATCCAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	173918721	173941553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173918983_173926438_173926451_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ENSMUSG00000027522.16_1	chr2	+	3826	8	NIC	ENSMUSG00000027522.16	novel	3865	9	NA	NA	14	-12	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGAAGAGCATCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	173918728	173941551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_173918983_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ENSMUSG00000027522.16_3	chr2	+	3717	9	FSM	ENSMUSG00000027522.16	ENSMUST00000044638.13	3731	9	3	11	3	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGAAGAGCATCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	173918853	173941552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173918983_173919130_173919146_173932413_173932522_173933274_173933416_173934194_173934361_173935226_173935319_173935721_173935866_173936852_173936934_173938711
ENSMUSG00000027523.21_113	chr2	+	529	2	FSM	ENSMUSG00000027523.21	ENST00000484504.5	537	2	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATCCCTGTATCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	174176007	174179872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174176078_174179413
ENSMUSG00000027523.21_120	chr2	+	458	1	ISM	ENSMUSG00000027523.21	ENSMUST00000180362.8	1645	5	53302	5	3410	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	589	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATCCCTGTATCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	174179414	174179872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_174179400_174179900
ENSMUSG00000027523.21_17	chr2	+	1526	12	FSM	ENSMUSG00000027523.21	ENST00000657090.1	1554	12	11	17	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAATGAGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	174126159	174188519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174126302_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_4	chr2	+	2495	11	FSM	ENSMUSG00000027523.21	ENST00000419558.7	2514	11	5	14	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATGAGCAAAATACGG	NA	NA	NA	NA	NA	NA	NA	NA	174126117	174188522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174127271_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_41	chr2	+	1641	12	FSM	ENSMUSG00000027523.21	ENST00000477931.5	1662	12	5	16	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAATGAGCAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	174169478	174188520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174169735_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_51	chr2	+	1511	11	FSM	ENSMUSG00000027523.21	ENST00000480975.5	1540	11	8	21	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATCAATAAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	174169548	174188505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174169735_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_55	chr2	+	3876	13	FSM	ENSMUSG00000027523.21	ENSMUST00000087871.11	3903	13	10	17	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAATGAGCAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	174169570	174188520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174169735_174169900_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_72	chr2	+	1758	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109085.8	1789	11	13	18	13	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAATGAGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	174171811	174188519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174172228_174176004_174176078_174183442_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_74	chr2	+	1674	11	FSM	ENSMUSG00000027523.21	ENSMUST00000109084.8	1695	11	2	19	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAATGAGCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	174171891	174188518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174172228_174176004_174176078_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_80	chr2	+	1699	12	FSM	ENSMUSG00000027523.21	ENSMUST00000109087.8	1716	12	11	6	3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCATTAAAAAATCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	174171892	174188499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174172228_174176004_174176078_174178539_174178585_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027523.21_93	chr2	+	1649	12	FSM	ENSMUSG00000027523.21	ENST00000682803.1	1671	12	8	14	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTAAAAATGAGCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	174172123	174188519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174172228_174176004_174176078_174178539_174178746_174183445_174183501_174183602_174183723_174184992_174185091_174186867_174186923_174187020_174187095_174187175_174187356_174187441_174187573_174187782_174187851_174188034
ENSMUSG00000027524.10_0	chr2	+	1066	4	FSM	ENSMUSG00000027524.10	ENST00000371025.7	1079	4	9	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTATGTTAAGTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	174602597	174624036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_174602812_174603305_174603619_174620380_174620558_174623674
ENSMUSG00000027525.19_0	chr2	+	1882	11	FSM	ENSMUSG00000027525.19	ENST00000361300.4	1901	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGAAATGAATAAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	177897914	177977853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_177898068_177901970_177902049_177911109_177911293_177924802_177924978_177925652_177925901_177944477_177944632_177969930_177969987_177973372_177973435_177974614_177974756_177975843_177975921_177977298
ENSMUSG00000027531.17_0	chr3	-	4172	9	FSM	ENSMUSG00000027531.17	ENSMUST00000065938.15	4185	9	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATAGCATGTTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	10396490	10377019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10380362_10381162_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUSG00000027531.17_6	chr3	-	2969	8	FSM	ENSMUSG00000027531.17	ENSMUST00000118410.8	2988	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGACTTAGGAATACC	NA	NA	NA	NA	NA	NA	NA	NA	10396488	10379021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10381315_10386671_10386781_10387963_10388073_10389111_10389158_10391166_10391272_10393404_10393539_10394002_10394069_10396381
ENSMUSG00000027533.11_0	chr3	+	965	4	FSM	ENSMUSG00000027533.11	ENSMUST00000029046.9	987	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAGCTTACAAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	10077621	10081659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_10077779_10080030_10080204_10080531_10080634_10081126
ENSMUSG00000027534.17_0	chr3	-	2495	7	FSM	ENSMUSG00000027534.17	ENSMUST00000099223.11	2512	7	15	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAGAGTGTTATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	10505147	10482878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10484284_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUSG00000027534.17_3	chr3	-	2275	8	FSM	ENSMUSG00000027534.17	ENSMUST00000029047.12	2288	8	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCAGTTGGGTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	10505141	10483212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10484284_10485256_10485377_10485799_10485937_10491222_10491293_10499417_10499567_10500505_10500593_10502870_10503345_10504974
ENSMUSG00000027536.7_0	chr3	+	6151	5	FSM	ENSMUSG00000027536.7	ENSMUST00000029049.7	6188	5	30	7	30	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTGGAAATGTATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	10431996	10460390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_10432282_10450611_10450790_10452096_10452212_10454608_10454763_10454971
ENSMUSG00000027540.14_0	chr2	+	4195	9	FSM	ENSMUSG00000027540.14	ENSMUST00000029053.8	4213	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACAGGCGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	167774256	167821297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167774477_167805547_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344
ENSMUSG00000027540.14_11	chr2	+	1269	9	FSM	ENSMUSG00000027540.14	ENST00000371621.5	1280	9	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACAGGCGTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	167805548	167821297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167805639_167806929_167807031_167809648_167809748_167813612_167813751_167815979_167816190_167816648_167816811_167817228_167817450_167818344_167818480_167821184
ENSMUSG00000027544.17_0	chr2	-	2481	11	FSM	ENSMUSG00000027544.17	ENST00000610033.5	2500	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAGACCTAGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	168432255	168322126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168322170_168328605_168328692_168346364_168347055_168348787_168348915_168349234_168349291_168365157_168365299_168376837_168377011_168378122_168378326_168409058_168409231_168412517_168413034_168431981
ENSMUSG00000027546.16_0	chr2	-	3709	28	FSM	ENSMUSG00000027546.16	ENSMUST00000109175.9	3729	28	18	2	18	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGCAGGCTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	168576241	168476359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168476829_168479420_168479625_168480989_168481048_168481801_168481911_168482550_168482616_168485781_168485938_168489604_168489670_168490474_168490620_168490710_168490801_168491448_168491548_168494487_168494659_168495413_168495498_168496095_168496189_168503848_168504011_168509925_168510139_168515396_168515510_168516711_168516855_168517120_168517282_168518061_168518139_168523895_168523972_168525632_168525714_168529260_168529356_168531218_168531271_168532885_168532945_168547042_168547152_168548114_168548229_168552751_168552897_168575940
ENSMUSG00000027547.18_0	chr2	-	2964	3	FSM	ENSMUSG00000027547.18	ENST00000423288.1	2990	3	14	12	-6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAGATTGCTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	168598631	168591971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168592381_168594373_168594651_168596353
ENSMUSG00000027547.18_1	chr2	-	1499	3	FSM	ENSMUSG00000027547.18	ENST00000429385.1	1514	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGGTGAGCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	168598615	168592110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168592381_168594373_168594661_168597673
ENSMUSG00000027550.15_0	chr3	+	3338	19	FSM	ENSMUSG00000027550.15	ENSMUST00000108370.9	3359	19	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATAACAGTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	14598861	14637711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14637463
ENSMUSG00000027550.15_13	chr3	+	3383	19	FSM	ENSMUSG00000027550.15	ENSMUST00000091325.10	3391	19	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGTTGATAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	14598888	14631160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605127_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUSG00000027550.15_9	chr3	+	5634	19	FSM	ENSMUSG00000027550.15	ENSMUST00000169079.8	5638	19	4	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCATCATTTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	14598886	14633361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14599083_14601058_14601265_14601533_14601600_14602269_14602438_14604688_14604865_14604970_14605175_14610555_14610753_14612306_14612455_14613167_14613317_14615310_14615516_14616447_14616588_14619363_14619566_14622248_14622435_14623310_14623486_14624287_14624452_14627183_14627393_14627483_14627622_14628018_14628155_14630792
ENSMUSG00000027551.16_0	chr2	-	2841	9	FSM	ENSMUSG00000027551.16	ENSMUST00000109162.9	2848	9	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGTGAGCGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	168797501	168735251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168736454_168741704_168741957_168748003_168748067_168748759_168748910_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUSG00000027551.16_2	chr2	-	2419	6	FSM	ENSMUSG00000027551.16	ENSMUST00000087971.11	2438	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTATAGTTTGTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	168797179	168767286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168768854_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUSG00000027551.16_6	chr2	-	988	6	FSM	ENSMUSG00000027551.16	ENSMUST00000109161.3	1009	6	13	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCACTGTTACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	168797196	168776740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168776860_168777130_168777383_168781890_168781954_168782656_168782819_168793464_168793699_168797038
ENSMUSG00000027552.15_1	chr3	+	1758	8	FSM	ENSMUSG00000027552.15	ENSMUST00000165922.3	1751	8	-12	5	-12	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATTGATCTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	14643718	14671363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14644084_14652369_14652480_14653199_14653362_14666059_14666107_14667707_14667773_14668697_14668966_14670184_14670230_14670667
ENSMUSG00000027555.9_0	chr3	+	2276	7	FSM	ENSMUSG00000027555.9	ENSMUST00000029071.9	2299	7	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAATAGGAGAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	14706797	14728050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14706906_14710096_14710295_14715718_14715838_14719943_14720040_14721288_14721352_14721968_14722125_14726514
ENSMUSG00000027556.16_2	chr3	-	357	3	FSM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAGTCCCAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	14835958	14831602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_14831713_14832463_14832620_14835867
ENSMUSG00000027556.16_4	chr3	-	268	2	ISM	ENSMUSG00000027556.16	ENST00000522389.5	370	3	3343	7	3343	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAGTCCCAGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	14832621	14831602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_14831713_14832463
ENSMUSG00000027559.6_0	chr3	+	1660	7	FSM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	2	17	2	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	11028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAATAAAAGACAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	14928599	14937566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14928666_14929309_14929508_14931862_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ENSMUSG00000027559.6_9	chr3	+	1591	6	ISM	ENSMUSG00000027559.6	ENSMUST00000029076.6	1679	7	715	17	715	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAATAAAAGACAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	14929312	14937566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_14929508_14931862_14931982_14933408_14933502_14934294_14934358_14935101_14935258_14936601
ENSMUSG00000027562.13_0	chr3	+	1768	7	FSM	ENSMUSG00000027562.13	ENSMUST00000029078.9	1788	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTCTATTCTGGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	14951498	14965821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_14951847_14952893_14953092_14960081_14960201_14960594_14960688_14961759_14961823_14962973_14963130_14965030
ENSMUSG00000027566.16_0	chr2	-	902	7	FSM	ENSMUSG00000027566.16	ENSMUST00000029082.9	914	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGATGAGAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	179684216	179678168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179678367_179678730_179678794_179679175_179679296_179679857_179679981_179680517_179680643_179681145_179681273_179684070
ENSMUSG00000027569.16_0	chr2	+	1176	6	FSM	ENSMUSG00000027569.16	ENSMUST00000169630.8	1192	6	5	11	5	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACCAGCAAGACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	180223101	180227416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180223331_180224403_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ENSMUSG00000027569.16_1	chr2	+	1488	5	FSM	ENSMUSG00000027569.16	ENSMUST00000029085.9	1510	5	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATTAAAGCACTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	180224515	180228069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180224749_180225193_180225316_180226198_180226281_180226589_180226665_180227093
ENSMUSG00000027573.12_0	chr2	+	1630	5	FSM	ENSMUSG00000027573.12	ENSMUST00000029090.9	1655	5	14	11	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCACAATGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	180351923	180360515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180352144_180354983_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027573.12_1	chr2	+	2053	4	FSM	ENSMUSG00000027573.12	ENSMUST00000078687.6	2063	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCACAATGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	180354340	180360515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180355114_180356482_180356680_180358651_180358850_180359630
ENSMUSG00000027575.20_0	chr2	+	2364	12	FSM	ENSMUSG00000027575.20	ENSMUST00000108862.8	2382	12	13	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAAGTTCTGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	180609030	180624246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180609123_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622190_180622268_180622829
ENSMUSG00000027575.20_10	chr2	+	2623	12	FSM	ENSMUSG00000027575.20	ENSMUST00000108859.8	2639	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCATGTGTTATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	180609102	180624098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180622196_180622268_180622829
ENSMUSG00000027575.20_11	chr2	+	2619	13	ISM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	365	2	299	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	180609391	180624317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUSG00000027575.20_13	chr2	+	1227	12	FSM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCCTCCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	180612835	180623219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180612908_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_16	chr2	+	1358	13	FSM	ENSMUSG00000027575.20	ENST00000353546.7	1363	13	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGTGTGAAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	180612834	180623239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_2	chr2	+	2704	14	FSM	ENSMUSG00000027575.20	ENSMUST00000029092.13	2714	14	8	2	-3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTCCAGTGCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	180609034	180624317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180609123_180609394_180609608_180612843_180612908_180613366_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620963_180621021_180621453_180621514_180622190_180622268_180622829
ENSMUSG00000027575.20_26	chr2	+	1284	12	ISM	ENSMUSG00000027575.20	ENST00000353546.7	1363	13	535	3	520	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGTGTGAAGACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	180613367	180623239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_180613477_180613776_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027575.20_30	chr2	+	1155	11	ISM	ENSMUSG00000027575.20	ENST00000547204.5	1230	12	944	0	929	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCCTCCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	180613776	180623219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_180613949_180614487_180614589_180615253_180615341_180615852_180615950_180618099_180618157_180619112_180619146_180620204_180620235_180620963_180621021_180621453_180621514_180622196_180622268_180622829
ENSMUSG00000027580.18_1	chr2	-	10102	19	FSM	ENSMUSG00000027580.18	ENSMUST00000108831.8	10109	19	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTCATGTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180883820	180869414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180870663_180870747_180870916_180871016_180871174_180871348_180871703_180871859_180872056_180872126_180872244_180872325_180872474_180872551_180872714_180872800_180872933_180873023_180873296_180873479_180877165_180877308_180877385_180877544_180878329_180879148_180879791_180879888_180880407_180881099_180881205_180881277_180881462_180881772_180882865_180883758
ENSMUSG00000027580.18_2	chr2	-	10038	18	ISM	ENSMUSG00000027580.18	ENSMUST00000108831.8	10109	19	958	7	894	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTCTCATGTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180882862	180869414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_180870663_180870747_180870916_180871016_180871174_180871348_180871703_180871859_180872056_180872126_180872244_180872325_180872474_180872551_180872714_180872800_180872933_180873023_180873296_180873479_180877165_180877308_180877385_180877544_180878329_180879148_180879791_180879888_180880407_180881099_180881205_180881277_180881462_180881772
ENSMUSG00000027581.13_0	chr2	-	234	2	FSM	ENSMUSG00000027581.13	ENST00000604037.1	246	2	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGTATTGGACCCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	180949187	180948558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180948614_180949008
ENSMUSG00000027582.17_0	chr2	+	2286	7	FSM	ENSMUSG00000027582.17	ENSMUST00000029105.12	2293	7	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGACTCAGCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	181006726	181022586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181007170_181007437_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_1	chr2	+	2061	6	FSM	ENSMUSG00000027582.17	ENSMUST00000108807.9	2072	6	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAATTCTCTCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	181007205	181022572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181008046_181020175_181020310_181020543_181020700_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027582.17_2	chr2	+	1763	6	FSM	ENSMUSG00000027582.17	ENST00000357119.8	1778	6	9	6	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAATTCTCTCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	181007473	181022572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181008046_181020175_181020310_181020543_181020670_181021362_181021483_181021566_181021973_181022167
ENSMUSG00000027583.14_0	chr2	-	2552	3	FSM	ENSMUSG00000027583.14	ENSMUST00000087409.10	2577	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGGAAAATGATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	181101206	181052349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181053774_181065211_181066182_181101048
ENSMUSG00000027589.15_0	chr2	+	3561	7	FSM	ENSMUSG00000027589.15	ENSMUST00000029116.14	3569	7	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATTGCTTCTGTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	181479650	181499250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181479778_181482947_181483132_181484167_181484499_181486188_181486292_181488260_181488433_181493378_181493503_181496730
ENSMUSG00000027589.15_3	chr2	+	1380	3	NIC	ENSMUSG00000027589.15	novel	1403	4	NA	NA	7	-5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCACAATTCAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	181484191	181498820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_181484499_181486188_181486292_181497850
ENSMUSG00000027589.15_4	chr2	+	1387	4	FSM	ENSMUSG00000027589.15	ENST00000369758.8	1403	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCACAATTCAGTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	181484195	181498820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181484499_181486188_181486292_181488260_181488272_181497850
ENSMUSG00000027593.16_0	chr2	+	1690	8	FSM	ENSMUSG00000027593.16	ENSMUST00000109701.10	1709	8	11	8	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAATATGCTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	154633026	154709157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_3	chr2	+	1737	9	FSM	ENSMUSG00000027593.16	ENSMUST00000116389.9	1759	9	14	8	-9	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGAATGGTTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	154633043	154709173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154633469_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_4	chr2	+	1788	10	FSM	ENSMUSG00000027593.16	ENSMUST00000029120.14	1802	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAAATATGCTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	154633059	154709157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154701830_154701879_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027593.16_5	chr2	+	1725	9	FSM	ENSMUSG00000027593.16	ENSMUST00000058089.13	1747	9	14	8	14	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGAATGGTTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	154633090	154709173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154633469_154662926_154663010_154699188_154699454_154701597_154701671_154703759_154703927_154705469_154705584_154705733_154705970_154707827_154707877_154708813
ENSMUSG00000027597.16_0	chr2	-	2520	10	FSM	ENSMUSG00000027597.16	ENSMUST00000054607.16	2543	10	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGCTAAAAGCTGGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	154916404	154901239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154902501_154904068_154904264_154905699_154905818_154905908_154905997_154906073_154906282_154906733_154906847_154907456_154907607_154909242_154909319_154910747_154910939_154916284
ENSMUSG00000027598.17_29	chr2	+	4010	25	FSM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGAATGTTTAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	154975454	155068618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286_155066955_155067824
ENSMUSG00000027598.17_3	chr2	+	2935	24	FSM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGTCTCTTAGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	154975435	155066700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154975506_154980115_154980193_155005312_155005404_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUSG00000027598.17_52	chr2	+	2863	23	ISM	ENSMUSG00000027598.17	ENST00000535650.7	2938	24	4685	0	4639	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGTCTCTTAGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	154980117	155066700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_154980193_155005312_155005404_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155025654_155025751_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286
ENSMUSG00000027598.17_53	chr2	+	3947	24	ISM	ENSMUSG00000027598.17	ENST00000665484.1	4015	25	4673	5	4649	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGAATGTTTAATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	154980127	155068618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_154980193_155005312_155005404_155010603_155010746_155014376_155014502_155015853_155015992_155020961_155021008_155022473_155022632_155024077_155024274_155027349_155027525_155031356_155031427_155034045_155034131_155041254_155041384_155044126_155044200_155045200_155045273_155048212_155048302_155050978_155051139_155051906_155052041_155052359_155052501_155054256_155054378_155054917_155055023_155059910_155060008_155062127_155062201_155066286_155066955_155067824
ENSMUSG00000027599.10_0	chr3	-	3655	7	FSM	ENSMUSG00000027599.10	ENSMUST00000029125.10	3673	7	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCAACCTGTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	19217220	19185574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19198493_19198684_19203649_19203742_19211635_19211857_19217073
ENSMUSG00000027599.10_6	chr3	-	2557	5	FSM	ENSMUSG00000027599.10	ENST00000458464.3	2584	5	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATGAAAATCAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	19211843	19186322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_19188388_19189006_19189082_19189170_19189288_19203649_19203742_19211635
ENSMUSG00000027601.14_0	chr3	+	2927	8	FSM	ENSMUSG00000027601.14	ENSMUST00000130645.8	2953	8	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	638	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATACTATTATCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	19242287	19274969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_19242453_19254189_19254332_19260615_19260715_19265631_19265748_19269634_19269868_19271343_19271588_19272325_19272486_19273201
ENSMUSG00000027602.10_0	chr2	+	1104	4	FSM	ENSMUSG00000027602.10	ENSMUST00000029128.4	1112	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCCAGCTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	155118224	155119993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155118567_155118877_155118934_155119017_155119125_155119394
ENSMUSG00000027603.16_0	chr2	-	2586	15	FSM	ENSMUSG00000027603.16	ENSMUST00000029131.11	2614	15	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGACTCTGGCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155356748	155332306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155333037_155335528_155335629_155336765_155336904_155337561_155337680_155337793_155337944_155340682_155340772_155340933_155341062_155342622_155342711_155344555_155344753_155345047_155345122_155345331_155345400_155346623_155346742_155347874_155348027_155348245_155348482_155356548
ENSMUSG00000027605.19_0	chr2	+	2913	18	FSM	ENSMUSG00000027605.19	ENSMUST00000029135.15	2931	18	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACATAACTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155359875	155404656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155360205_155363900_155364097_155391110_155391203_155391395_155391500_155391718_155391792_155392022_155392099_155392274_155392390_155397773_155397912_155398252_155398424_155398697_155398832_155399016_155399150_155399229_155399287_155399468_155399550_155400510_155400620_155402541_155402611_155402949_155403127_155403665_155403741_155403872
ENSMUSG00000027610.18_0	chr2	-	1949	13	FSM	ENSMUSG00000027610.18	ENSMUST00000079691.13	1963	13	8	6	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAATGACTCATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	155434722	155405106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155405640_155406679_155406870_155408722_155408805_155409612_155409808_155413438_155413506_155414843_155414922_155415014_155415096_155419441_155419559_155420208_155420349_155420631_155420708_155423807_155423954_155429361_155429497_155434613
ENSMUSG00000027611.13_0	chr2	+	1561	4	FSM	ENSMUSG00000027611.13	ENSMUST00000029140.12	1597	4	23	13	23	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGTATAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	155593059	155597378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155593385_155595264_155595523_155596159_155596448_155596688
ENSMUSG00000027612.8_0	chr2	+	4279	9	FSM	ENSMUSG00000027612.8	ENSMUST00000029141.6	4306	9	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTTTTCCCCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	155617282	155660280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155617558_155634446_155634596_155639985_155640103_155641604_155641910_155649320_155649483_155652191_155652407_155654136_155654276_155655815_155656083_155657630
ENSMUSG00000027613.16_0	chr2	-	1484	6	FSM	ENSMUSG00000027613.16	ENSMUST00000029142.15	1500	6	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	4090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCAGTGTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155668835	155661757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155662032_155664756_155664939_155665111_155665289_155665784_155665961_155668044_155668131_155668246
ENSMUSG00000027615.15_1	chr3	-	4001	17	FSM	ENSMUSG00000027615.15	ENSMUST00000012580.13	4016	17	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATAGTGGAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	20089473	20050117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084970_20089212
ENSMUSG00000027615.15_4	chr3	-	3357	17	FSM	ENSMUSG00000027615.15	ENSMUST00000108321.2	3385	17	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAAATCTGTCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	20089444	20050336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_20051194_20056486_20056578_20057388_20057596_20062978_20063087_20064963_20065153_20065552_20065739_20066860_20067095_20068186_20068368_20069989_20070172_20072974_20073084_20073966_20074122_20076921_20077004_20079894_20080085_20083123_20083210_20083310_20083483_20084477_20084574_20089212
ENSMUSG00000027618.18_0	chr2	-	2039	13	FSM	ENSMUSG00000027618.18	ENSMUST00000029147.16	2051	13	12	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCCTTGAATTTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	155986094	155965558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155966248_155967200_155967291_155968238_155968323_155968930_155969013_155969585_155969692_155970357_155970516_155973572_155973708_155974552_155974647_155976325_155976479_155981648_155981733_155984045_155984163_155985286_155985379_155985939
ENSMUSG00000027618.18_12	chr2	-	694	3	FSM	ENSMUSG00000027618.18	ENSMUST00000109600.2	709	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGCATTTCGCGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	155986093	155983714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155984163_155985286_155985379_155985939
ENSMUSG00000027620.17_0	chr2	-	2792	17	FSM	ENSMUSG00000027620.17	ENSMUST00000109587.9	2810	17	8	10	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGAAAATTTTCGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	156022150	155989168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_17	chr2	-	2357	16	FSM	ENSMUSG00000027620.17	ENST00000528062.7	2369	16	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTAGTGTGTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	156022072	155989459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996210_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_22	chr2	-	651	4	FSM	ENSMUSG00000027620.17	ENSMUST00000109584.8	667	4	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTAGGATGGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	156022145	156016696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156016895_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027620.17_7	chr2	-	2691	17	FSM	ENSMUSG00000027620.17	ENSMUST00000029149.13	2711	17	12	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGCCACAAGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	156022075	155989176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155990112_155990204_155990284_155991155_155991262_155992654_155992737_155996158_155996192_156000319_156000398_156000956_156001162_156003487_156003554_156003747_156003886_156004648_156004802_156006725_156006844_156009457_156009512_156009604_156009671_156014747_156014943_156019255_156019306_156021096_156021161_156021806
ENSMUSG00000027624.21_0	chr2	+	6465	23	FSM	ENSMUSG00000027624.21	ENSMUST00000103137.10	6490	23	17	8	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAACCATGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156262845	156385126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUSG00000027624.21_2	chr2	+	6240	22	FSM	ENSMUSG00000027624.21	ENSMUST00000103136.8	6249	22	1	8	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAACCATGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156263021	156385126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156263220_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUSG00000027624.21_3	chr2	+	6228	22	FSM	ENSMUSG00000027624.21	ENSMUST00000109577.9	6251	22	15	8	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAACCATGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156263046	156385126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156263220_156280504_156280554_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUSG00000027624.21_4	chr2	+	6497	22	FSM	ENSMUSG00000027624.21	ENSMUST00000029155.16	6521	22	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGAACCATGGACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	156317471	156385126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156317927_156335823_156336015_156336876_156337042_156337779_156337885_156338405_156338449_156341506_156341583_156345564_156345784_156347685_156347774_156348270_156348424_156350732_156350831_156351051_156351228_156352652_156352802_156353704_156353741_156355947_156356131_156366800_156367209_156368808_156368914_156371309_156371391_156375700_156375788_156376605_156376690_156378899_156378981_156379286_156379404_156381729
ENSMUSG00000027628.11_0	chr2	+	2749	5	FSM	ENSMUSG00000027628.11	ENSMUST00000109570.8	2766	5	14	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATCCCCCTGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	156389517	156410073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156389804_156391804_156391948_156392568_156393370_156397746_156397977_156408784
ENSMUSG00000027628.11_4	chr2	+	3416	4	FSM	ENSMUSG00000027628.11	ENSMUST00000029158.4	3427	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACATTCAGTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	156389524	156410890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156389804_156392568_156393370_156397746_156397977_156408784
ENSMUSG00000027630.14_0	chr3	+	8205	17	FSM	ENSMUSG00000027630.14	ENSMUST00000193734.6	8237	17	22	10	22	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAAGTACAGATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	22130837	22270748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_22131119_22143576_22143687_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUSG00000027630.14_1	chr3	+	4191	16	FSM	ENSMUSG00000027630.14	ENSMUST00000202747.4	4209	16	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAATAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	22130901	22266908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_22131119_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUSG00000027630.14_3	chr3	+	6636	16	FSM	ENSMUSG00000027630.14	ENSMUST00000063988.14	6667	16	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTATGTTGGCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	22131472	22269451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_22131592_22203105_22203173_22233366_22233470_22242529_22242676_22243931_22244155_22245078_22245212_22245555_22245698_22246183_22246248_22246333_22246432_22247271_22247333_22254483_22254606_22254753_22254829_22257260_22257389_22257990_22258157_22263675_22263778_22264564
ENSMUSG00000027634.15_0	chr2	-	2579	16	FSM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTACCCGGCTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	156833976	156769271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_1	chr2	-	2605	17	FSM	ENSMUSG00000027634.15	ENSMUST00000069600.13	2612	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTACCCGGCTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	156833963	156769271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156770802_156771851_156771891_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956_156812059_156833918
ENSMUSG00000027634.15_13	chr2	-	1547	13	FSM	ENSMUSG00000027634.15	ENST00000373773.7	1563	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGCAGGCAGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	156812054	156770014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156800386_156800423_156811956
ENSMUSG00000027634.15_14	chr2	-	1741	14	FSM	ENSMUSG00000027634.15	ENST00000359675.6	1754	14	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGGCAGGCAGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	156812057	156770014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156811956
ENSMUSG00000027634.15_4	chr2	-	2516	15	ISM	ENSMUSG00000027634.15	ENSMUST00000072298.13	2586	16	21923	7	9	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTACCCGGCTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	156812053	156769271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_156770802_156773135_156773188_156773349_156773386_156776861_156776910_156779246_156779299_156779405_156779472_156780470_156780575_156782276_156782334_156785906_156785994_156786304_156786366_156787936_156788000_156790161_156790283_156791953_156792060_156800386_156800423_156811956
ENSMUSG00000027635.16_0	chr2	-	2063	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTACACTATGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	156848983	156837189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156847794_156848894
ENSMUSG00000027635.16_2	chr2	-	1976	10	ISM	ENSMUSG00000027635.16	ENSMUST00000103129.9	2080	11	1200	5	1200	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTACACTATGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	156847795	156837189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767
ENSMUSG00000027635.16_3	chr2	-	2617	11	FSM	ENSMUSG00000027635.16	ENSMUST00000103130.8	2636	11	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTTGAAGTGTACACTA	NA	NA	NA	NA	NA	NA	NA	NA	156849056	156837197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156838202_156838652_156838741_156839526_156839675_156840639_156840718_156841055_156841116_156842753_156842845_156843602_156843676_156844608_156844683_156847087_156847412_156847767_156848283_156848894
ENSMUSG00000027636.12_0	chr2	-	2605	8	FSM	ENSMUSG00000027636.12	ENSMUST00000109561.4	2634	8	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTATCATTAATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	156729094	156714852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156716458_156716796_156716930_156717741_156717892_156720623_156720728_156721361_156721449_156721765_156721866_156725508_156725640_156728799
ENSMUSG00000027637.4_0	chr2	+	1027	4	FSM	ENSMUSG00000027637.4	ENSMUST00000029165.4	1045	4	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAAGTGTGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	156705057	156715475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156705338_156707176_156707281_156714257_156714388_156714962
ENSMUSG00000027637.4_1	chr2	+	815	3	FSM	ENSMUSG00000027637.4	ENST00000342422.3	832	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAAAGTGTGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	156705139	156715475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156705338_156707176_156707281_156714962
ENSMUSG00000027639.17_0	chr2	-	3910	16	FSM	ENSMUSG00000027639.17	ENSMUST00000057725.10	3926	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGCTTAGTCTCTCGA	NA	NA	NA	NA	NA	NA	NA	NA	156977176	156939459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156941424_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUSG00000027639.17_5	chr2	-	1977	16	FSM	ENSMUSG00000027639.17	ENSMUST00000088523.11	1996	16	11	8	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTAACTCCAGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	156977131	156943287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156943364_156943640_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156954719_156954862_156956141_156956243_156958271_156958428_156962401_156962473_156963750_156963867_156965208_156965370_156968691_156968765_156971769_156971837_156976798
ENSMUSG00000027639.17_9	chr2	-	1009	9	FSM	ENSMUSG00000027639.17	ENST00000646066.1	1024	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGGGGGACGCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	156963855	156943644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156943779_156946751_156946857_156948150_156948244_156949348_156949486_156951336_156951453_156952467_156952560_156958271_156958428_156962401_156962473_156963750
ENSMUSG00000027641.14_0	chr2	-	4838	22	FSM	ENSMUSG00000027641.14	ENSMUST00000029170.8	4862	22	14	10	14	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTAAACTATTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	157046418	156987822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156989597_156992588_156992754_156994815_156994965_157001579_157001659_157003299_157003372_157005458_157005636_157009154_157009367_157011786_157012051_157016694_157016828_157017447_157017613_157019138_157019277_157029854_157029959_157030142_157030256_157033826_157033994_157034995_157035183_157035931_157035982_157037199_157037361_157037460_157037590_157037679_157037745_157038074_157038276_157041335_157041470_157046219
ENSMUSG00000027642.16_0	chr2	+	2746	17	FSM	ENSMUSG00000027642.16	ENSMUST00000116380.9	2756	17	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	6778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTCTTCTGTGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	157120988	157168239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157121256_157125503_157125698_157131447_157131544_157132456_157132633_157136072_157136149_157137173_157137309_157139301_157139479_157141460_157141580_157144325_157144432_157152120_157152213_157154396_157154512_157156697_157156893_157158042_157158130_157159866_157159963_157162040_157162117_157163662_157163793_157167630
ENSMUSG00000027646.16_0	chr2	+	3895	14	FSM	ENSMUSG00000027646.16	ENSMUST00000029175.14	3906	14	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGACATCGACTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	157266202	157313774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUSG00000027646.16_1	chr2	+	3868	15	FSM	ENSMUSG00000027646.16	ENSMUST00000092576.11	3887	15	7	12	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGACCTCAGTTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	157266219	157313746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157266335_157281120_157281198_157297510_157297688_157298996_157299252_157300453_157300554_157300762_157300781_157304629_157304729_157304898_157305003_157306548_157306699_157307792_157307949_157309350_157309531_157310402_157310480_157311044_157311199_157311309_157311442_157311672
ENSMUSG00000027649.16_1	chr2	+	2425	16	FSM	ENSMUSG00000027649.16	ENSMUST00000029178.7	2442	16	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGACTGCTTCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	157579331	157733528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157579480_157616330_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027649.16_29	chr2	+	1759	15	ISM	ENSMUSG00000027649.16	ENST00000628103.2	1778	16	36894	0	36894	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGGGCTGACATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	157616330	157733010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_157616520_157621731_157621839_157630911_157631052_157641346_157641445_157648594_157648689_157651384_157651477_157659674_157659748_157659970_157660030_157661373_157661523_157678429_157678612_157710219_157710318_157713027_157713109_157726052_157726191_157726347_157726421_157732824
ENSMUSG00000027650.13_1	chr2	-	3819	8	FSM	ENSMUSG00000027650.13	ENSMUST00000029179.11	3830	8	2	9	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTTGATGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	157870351	157823731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938_157851279_157870293
ENSMUSG00000027650.13_2	chr2	-	3758	7	FSM	ENSMUSG00000027650.13	ENSMUST00000109522.2	3765	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTCTTGATGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	157851275	157823731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_157824381_157834887_157834976_157835273_157835479_157837300_157837442_157838996_157839146_157842539_157842729_157848938
ENSMUSG00000027651.17_0	chr2	+	4480	7	FSM	ENSMUSG00000027651.17	ENSMUST00000103123.10	4504	7	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACAAGATCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	157870428	157920115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889838_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUSG00000027651.17_1	chr2	+	4234	7	FSM	ENSMUSG00000027651.17	ENSMUST00000029180.14	4283	7	37	12	37	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACAAGATCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	157870677	157920115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157916849
ENSMUSG00000027651.17_3	chr2	+	4381	8	FSM	ENSMUSG00000027651.17	ENSMUST00000109518.8	4399	8	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAACAAGATCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	157870626	157920115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157870966_157877915_157878046_157885325_157885460_157889835_157889949_157892006_157892134_157900571_157900748_157912480_157912577_157916849
ENSMUSG00000027652.16_0	chr2	+	8357	30	FSM	ENSMUSG00000027652.16	ENSMUST00000109486.9	8383	30	17	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATAACTTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	158251784	158341164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUSG00000027652.16_2	chr2	+	8356	30	FSM	ENSMUSG00000027652.16	ENSMUST00000046274.12	8366	30	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAATAACTTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	158251773	158341164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292108_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUSG00000027652.16_7	chr2	+	6678	31	FSM	ENSMUSG00000027652.16	ENSMUST00000109485.9	6709	31	23	8	23	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAAGAGGGCTGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	158251893	158339558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158252024_158262733_158262950_158268084_158268288_158272336_158272501_158274653_158274841_158277377_158277510_158278409_158278589_158278922_158279072_158279179_158279397_158281448_158281485_158282689_158282892_158285157_158285326_158285746_158285862_158286492_158286641_158288048_158288114_158290239_158290370_158292096_158292231_158296043_158296227_158298370_158298523_158303990_158304179_158305991_158306099_158307738_158307892_158308655_158308866_158315042_158315202_158318024_158318191_158319560_158319684_158324284_158324422_158334283_158334393_158334854_158334934_158336544_158336694_158337370
ENSMUSG00000027654.3_0	chr2	+	2245	4	FSM	ENSMUSG00000027654.3	ENSMUST00000029183.3	2266	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAGGTATTTGTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	158610024	158628548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158610508_158621764_158621933_158625052_158625178_158627079
ENSMUSG00000027655.15_1	chr2	+	3270	22	FSM	ENSMUSG00000027655.15	ENSMUST00000109478.9	3284	22	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGACATGTTTCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	158636734	158700128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158636849_158643294_158643429_158648317_158648411_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ENSMUSG00000027655.15_4	chr2	+	1975	20	FSM	ENSMUSG00000027655.15	ENST00000373323.8	1987	20	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGGCAAGTGGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	158643302	158699048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158643429_158648842_158648921_158657349_158657455_158659282_158659345_158660181_158660252_158662305_158662366_158668224_158668338_158669822_158669920_158671422_158671582_158673581_158673793_158676789_158676915_158678560_158678616_158682470_158682567_158684224_158684320_158684775_158684854_158685997_158686128_158688827_158688910_158691401_158691474_158693630_158693743_158698999
ENSMUSG00000027656.8_0	chr2	+	1715	5	FSM	ENSMUSG00000027656.8	ENSMUST00000029188.8	1719	5	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCGTTTTGTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	163662809	163675063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163663030_163663208_163663302_163667060_163667278_163670771_163671030_163674136
ENSMUSG00000027660.17_1	chr3	+	6564	7	FSM	ENSMUSG00000027660.17	ENSMUST00000118470.8	6578	7	6	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAATGAAGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	31149212	31176714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167652_31170964_31171189_31171521_31171747_31172603
ENSMUSG00000027660.17_23	chr3	+	2357	7	ISM	ENSMUSG00000027660.17	ENST00000426052.6	2392	8	1502	6	-117	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCCAGTGGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31150864	31172957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_31151020_31151500_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUSG00000027660.17_4	chr3	+	6704	7	FSM	ENSMUSG00000027660.17	ENSMUST00000029194.12	6717	7	2	11	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAATGAAGTTTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	31149211	31176715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_31149307_31150851_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUSG00000027660.17_9	chr3	+	2386	8	FSM	ENSMUSG00000027660.17	ENST00000426052.6	2392	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTCCAGTGGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31149362	31172957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_31149379_31150851_31151020_31151500_31152569_31165773_31165872_31167556_31167790_31170964_31171189_31171521_31171747_31172603
ENSMUSG00000027663.13_1	chr3	-	7793	6	FSM	ENSMUSG00000027663.13	ENSMUST00000029199.11	7797	6	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTCGGTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32419827	32388944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ENSMUSG00000027663.13_2	chr3	-	7652	7	FSM	ENSMUSG00000027663.13	ENSMUST00000168566.3	7672	7	20	0	20	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGTTCGGTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32419749	32388944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32394573_32394635_32395845_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419652
ENSMUSG00000027663.13_6	chr3	-	1184	6	FSM	ENSMUSG00000027663.13	ENST00000311417.7	1191	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCTGCTTAGTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	32419808	32395546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32395848_32397482_32397584_32397700_32397868_32399606_32399730_32415038_32415366_32419643
ENSMUSG00000027665.14_0	chr3	+	6656	21	FSM	ENSMUSG00000027665.14	ENSMUST00000108243.8	6689	21	30	3	30	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTAGTTCTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	32451849	32520253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32451950_32490278_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ENSMUSG00000027665.14_11	chr3	+	6168	20	FSM	ENSMUSG00000027665.14	ENSMUST00000108242.2	6171	20	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTAGTTCTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	32490524	32520253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32490565_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ENSMUSG00000027665.14_13	chr3	+	6128	19	ISM	ENSMUSG00000027665.14	ENSMUST00000108242.2	6171	20	742	3	742	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTAGTTCTTATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	32491266	32520253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ENSMUSG00000027665.14_2	chr3	+	8904	20	FSM	ENSMUSG00000027665.14	ENSMUST00000029201.14	8917	20	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATCTAAAAAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	32490302	32522625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32515998_32516709
ENSMUSG00000027665.14_4	chr3	+	4037	20	FSM	ENSMUSG00000027665.14	ENST00000643187.1	4050	20	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGGGAAATTCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	32490330	32517693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32490707_32491266_32491477_32491965_32492217_32493852_32494099_32494775_32494862_32496874_32496981_32497727_32497881_32497963_32498099_32502103_32502229_32503671_32503754_32504057_32504223_32504410_32504515_32505904_32506077_32508009_32508117_32508527_32508650_32510241_32510321_32514010_32514182_32515628_32515747_32515845_32516021_32516639
ENSMUSG00000027667.14_0	chr3	+	2195	7	FSM	ENSMUSG00000027667.14	ENSMUST00000193287.6	2211	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGCATGACAGTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	32564416	32574975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32564739_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUSG00000027667.14_3	chr3	+	1964	7	FSM	ENSMUSG00000027667.14	ENSMUST00000191783.6	1988	7	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTTAAAAATGGGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	32564696	32574881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32564882_32567149_32567342_32568532_32568604_32569432_32569502_32571177_32571289_32573258_32573394_32573680
ENSMUSG00000027668.14_0	chr3	+	4547	18	FSM	ENSMUSG00000027668.14	ENSMUST00000091257.11	4562	18	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATAGCATTTATCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	32583621	32633381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32583845_32586046_32586166_32588386_32588523_32592418_32592582_32596954_32597080_32598215_32598325_32600736_32600845_32608303_32608458_32609622_32609691_32615613_32615736_32617160_32617288_32617523_32617629_32617941_32618045_32618224_32618455_32622405_32622559_32623636_32623834_32628382_32628518_32631211
ENSMUSG00000027669.15_0	chr3	-	5978	10	FSM	ENSMUSG00000027669.15	ENSMUST00000155737.8	5997	10	13	6	13	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGGCTCACTGTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	32670721	32634486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32639376_32641709_32641927_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425_32650533_32652274_32652314_32656193_32656290_32670587
ENSMUSG00000027669.15_7	chr3	-	817	6	FSM	ENSMUSG00000027669.15	ENST00000466899.6	828	6	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAGGTGACTATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	32650525	32639154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32639376_32643857_32644060_32644145_32644213_32645259_32645423_32647306_32647371_32650425
ENSMUSG00000027670.5_0	chr2	-	3632	3	FSM	ENSMUSG00000027670.5	ENSMUST00000029213.5	3657	3	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTTTCTTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	165242300	165235679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165238219_165239140_165240141_165242207
ENSMUSG00000027671.15_0	chr3	+	1995	14	FSM	ENSMUSG00000027671.15	ENSMUST00000029214.14	2010	14	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGTGCTGGATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32762666	32781118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32763030_32766016_32766094_32766249_32766425_32768665_32768767_32769564_32769663_32772179_32772275_32772516_32772624_32772715_32772806_32774049_32774112_32774334_32774450_32774583_32774665_32776768_32776865_32779395_32779483_32780670
ENSMUSG00000027673.13_0	chr3	+	1061	6	FSM	ENSMUSG00000027673.13	ENSMUST00000127477.8	1079	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTAGCATCTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32791149	32805708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32791355_32799002_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUSG00000027673.13_6	chr3	+	606	5	FSM	ENSMUSG00000027673.13	ENSMUST00000122290.2	625	5	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACACAAGATTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32798919	32805375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32799092_32800596_32800664_32801876_32801939_32802609_32802717_32805177
ENSMUSG00000027674.17_1	chr3	-	2314	12	FSM	ENSMUSG00000027674.17	ENST00000392649.7	2326	12	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGAAGGGTGGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33079011	33004158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33069113_33069226_33078844
ENSMUSG00000027674.17_21	chr3	-	1784	13	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	58206	267	77	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAGAAGACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	33078946	33004818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844
ENSMUSG00000027674.17_3	chr3	-	2571	15	FSM	ENSMUSG00000027674.17	ENST00000467460.6	2571	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGAAGGGTGGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33197049	33004158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613_33134686_33196997
ENSMUSG00000027674.17_5	chr3	-	2513	14	ISM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	2473	-393	1538	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGAAGGGTGGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33134679	33004158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613
ENSMUSG00000027674.17_62	chr3	-	2300	15	FSM	ENSMUSG00000027674.17	ENST00000476138.5	2314	15	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCACTCGCTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33137143	33004556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33134613_33134686_33136964
ENSMUSG00000027674.17_7	chr3	-	2811	14	FSM	ENSMUSG00000027674.17	ENST00000485199.5	2821	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGAAGGGTGGGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33197394	33004158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33134613_33134686_33196997
ENSMUSG00000027674.17_83	chr3	-	1814	14	FSM	ENSMUSG00000027674.17	ENST00000464614.5	1830	14	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCCAAAACACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33137029	33004733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33069113_33069226_33078844_33078950_33134613_33134686_33136964
ENSMUSG00000027674.17_91	chr3	-	1839	14	FSM	ENSMUSG00000027674.17	ENST00000465751.5	1850	14	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAGAAGACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	33197049	33004818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33005023_33006619_33006778_33007184_33007351_33008476_33008675_33009910_33009982_33010821_33010966_33012894_33013012_33047054_33047151_33058452_33058550_33060068_33060193_33061270_33061466_33069113_33069226_33078844_33078950_33196997
ENSMUSG00000027676.12_2	chr3	-	2439	18	FSM	ENSMUSG00000027676.12	ENST00000651576.1	2450	18	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAGAGGCCCGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	33898338	33868397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892117_33893226_33893374_33895217_33895338_33898253
ENSMUSG00000027676.12_22	chr3	-	2422	17	ISM	ENSMUSG00000027676.12	ENST00000651576.1	2450	18	5	109	5	-109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAGTATAATATAGT	NA	NA	NA	NA	NA	NA	NA	NA	33898339	33868501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_33868679_33868803_33868945_33869560_33869668_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33886676_33886869_33890864_33890994_33891088_33891182_33891954_33892117_33893226_33893374_33895217_33895338_33898253
ENSMUSG00000027676.12_23	chr3	-	2387	17	ISM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	8	109	8	-109	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAGTATAATATAGT	NA	NA	NA	NA	NA	NA	NA	NA	33898336	33868501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33890864_33890994_33891088_33891182_33891954_33892117_33893226_33893374_33895217_33895338_33898253
ENSMUSG00000027676.12_3	chr3	-	2407	18	FSM	ENSMUSG00000027676.12	ENST00000651046.1	2418	18	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAAGAGGCCCGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	33898338	33868397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33868416_33868501_33868679_33868803_33868945_33869560_33869668_33870060_33870221_33870976_33871101_33873956_33874166_33875525_33875664_33879539_33879705_33880603_33880799_33884173_33884307_33884805_33884910_33890864_33890994_33891088_33891182_33891954_33892117_33893226_33893374_33895217_33895338_33898253
ENSMUSG00000027677.18_0	chr3	+	9655	10	FSM	ENSMUSG00000027677.18	ENSMUST00000099153.10	9661	10	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCAGCTGTTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	33853985	33869008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ENSMUSG00000027677.18_12	chr3	+	4886	11	FSM	ENSMUSG00000027677.18	ENSMUST00000117915.8	4913	11	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAGTATGCAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	33854379	33866431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ENSMUSG00000027677.18_15	chr3	+	2678	12	FSM	ENSMUSG00000027677.18	ENSMUST00000108210.9	2684	12	6	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTGGGGTAGAATATATG	NA	NA	NA	NA	NA	NA	NA	NA	33854405	33864093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_33854586_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964_33861083_33861987_33862098_33862834
ENSMUSG00000027677.18_9	chr3	+	2701	10	FSM	ENSMUSG00000027677.18	ENSMUST00000200271.5	2724	10	2	21	2	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGTAAGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33854341	33862172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_33854824_33855104_33855230_33855339_33855540_33857007_33857093_33857223_33857354_33857598_33857755_33858148_33858221_33858569_33858690_33858788_33858912_33860964
ENSMUSG00000027678.18_0	chr2	+	5745	23	FSM	ENSMUSG00000027678.18	ENSMUST00000109252.8	5757	23	6	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTAGCCCACTCATC	NA	NA	NA	NA	NA	NA	NA	NA	165834561	165913384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910251_165910469_165911124_165911300_165911730_165911873_165912051
ENSMUSG00000027678.18_1	chr2	+	7519	23	FSM	ENSMUSG00000027678.18	ENSMUST00000088095.6	7531	23	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCGCCTCCGCATGC	NA	NA	NA	NA	NA	NA	NA	NA	165834561	165915155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_165834679_165876804_165876884_165889375_165889481_165889702_165889876_165890374_165890476_165891985_165892161_165893231_165893418_165893533_165893627_165894274_165894416_165894673_165894822_165896201_165896579_165896690_165897560_165899008_165899139_165900561_165900757_165901083_165901396_165901614_165901742_165902676_165902849_165907677_165907972_165909481_165909566_165910248_165910469_165911124_165911300_165911730_165911873_165912051
ENSMUSG00000027679.14_0	chr3	-	2471	6	FSM	ENSMUSG00000027679.14	ENSMUST00000011029.12	2499	6	10	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34135451	34110186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_34112264_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUSG00000027679.14_2	chr3	-	641	6	FSM	ENSMUSG00000027679.14	ENSMUST00000108195.10	659	6	8	10	-1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTATAAATGCTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34135462	34131437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_34131674_34132923_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUSG00000027679.14_8	chr3	-	1684	5	FSM	ENSMUSG00000027679.14	ENSMUST00000117223.4	1695	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTTTAAGTCCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	34135411	34131593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_34132995_34133353_34133434_34134232_34134307_34134379_34134432_34135334
ENSMUSG00000027680.16_0	chr3	+	2448	17	FSM	ENSMUSG00000027680.16	ENSMUST00000001620.13	2459	17	6	5	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34074097	34123486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34119122_34119204_34122309_34122402_34123065
ENSMUSG00000027680.16_21	chr3	+	2117	15	FSM	ENSMUSG00000027680.16	ENSMUST00000198051.5	2127	15	2	8	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34074255	34123486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_24	chr3	+	2119	17	FSM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	2	8	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34074258	34123486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUSG00000027680.16_26	chr3	+	3008	16	FSM	ENSMUSG00000027680.16	ENSMUST00000200392.5	3014	16	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATGGTAAGCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34074257	34124466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34074313_34093675_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_41	chr3	+	2063	16	ISM	ENSMUSG00000027680.16	ENSMUST00000197694.5	2129	17	19421	8	19421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34093677	34123486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_34093729_34095211_34095306_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34122309_34122402_34123065
ENSMUSG00000027680.16_56	chr3	+	1697	13	ISM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	25935	3	25925	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGAAAGGGGAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	34100181	34123358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027680.16_6	chr3	+	1763	14	FSM	ENSMUSG00000027680.16	ENST00000491062.5	1767	14	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGAAAGGGGAGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	34074247	34123358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34074313_34100180_34100253_34100585_34100735_34101114_34101209_34101780_34101898_34103301_34103473_34104223_34104303_34108370_34108481_34110478_34110566_34112172_34112231_34112317_34112381_34115976_34116181_34118267_34118469_34123065
ENSMUSG00000027684.17_0	chr3	-	4353	15	FSM	ENSMUSG00000027684.17	ENSMUST00000172694.8	4381	15	10	18	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCATGAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	30067295	30005462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30031407_30031496_30033749_30034135_30039489_30039644_30041178_30041327_30047634_30047852_30051794_30051898_30063911_30064047_30066690
ENSMUSG00000027684.17_1	chr3	-	5678	15	FSM	ENSMUSG00000027684.17	ENSMUST00000108270.10	5692	15	6	8	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCATGAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	30067648	30005462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30031407_30031496_30033749_30035107_30039489_30039644_30041178_30041327_30047634_30047852_30051794_30051898_30063911_30064047_30066690
ENSMUSG00000027684.17_3	chr3	-	3812	15	FSM	ENSMUSG00000027684.17	ENSMUST00000108271.10	3851	15	32	7	32	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCATGAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	30194540	30005462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30031407_30031496_30033749_30034135_30039489_30039644_30041178_30041327_30047634_30047852_30051794_30051898_30063911_30064047_30194476
ENSMUSG00000027684.17_6	chr3	-	3740	14	ISM	ENSMUSG00000027684.17	ENSMUST00000172694.8	4381	15	3267	18	3267	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCATGAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	30064038	30005462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30031407_30031496_30033749_30034135_30039489_30039644_30041178_30041327_30047634_30047852_30051794_30051898_30063911
ENSMUSG00000027684.17_7	chr3	-	5031	16	FSM	ENSMUSG00000027684.17	ENSMUST00000173495.8	5066	16	20	15	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCATGAAAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	30563862	30005462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30007000_30010454_30010639_30011461_30011699_30015121_30015267_30017207_30017378_30019597_30019676_30020801_30020969_30026828_30026856_30031407_30031496_30033749_30035107_30039489_30039644_30041178_30041327_30047634_30047852_30051794_30051898_30063911_30064047_30563578
ENSMUSG00000027694.10_1	chr3	+	433	2	FSM	ENSMUSG00000027694.10	ENST00000430836.1	443	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAATTAGTCACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	60784445	60784997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60784468_60784586
ENSMUSG00000027694.10_5	chr3	+	399	1	ISM	ENSMUSG00000027694.10	ENST00000430836.1	443	2	153	10	153	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	1315	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCAATTAGTCACCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	60784598	60784997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_60784600_60785000
ENSMUSG00000027695.17_2	chr3	+	4839	27	FSM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	0	10	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGCCAAGGATGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	27992843	28187378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_27992900_28006661_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ENSMUSG00000027695.17_4	chr3	+	4786	26	ISM	ENSMUSG00000027695.17	ENSMUST00000120834.8	4849	27	13823	2	13823	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGGTGAAATCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	28006666	28187386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_28006812_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ENSMUSG00000027695.17_6	chr3	+	4777	26	FSM	ENSMUSG00000027695.17	ENSMUST00000067757.11	4804	26	22	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGCCAAGGATGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	28038341	28187378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_28038486_28078311_28078503_28079361_28079490_28082744_28082891_28083315_28083422_28085385_28085452_28093924_28093984_28095333_28095427_28099092_28099246_28102161_28102312_28103357_28103442_28110611_28110694_28125314_28125426_28130539_28130741_28132352_28132567_28139934_28140064_28141320_28141440_28142794_28142909_28149919_28150031_28153808_28153898_28163883_28163998_28166391_28166442_28174842_28174978_28178721_28178876_28184461_28184580_28185662
ENSMUSG00000027698.15_0	chr3	+	4464	5	FSM	ENSMUSG00000027698.15	ENSMUST00000046515.15	4480	5	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATGCCTCTGGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	27237127	27299105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_27237365_27276816_27277046_27280221_27280292_27293680_27293853_27295349
ENSMUSG00000027699.20_0	chr3	-	4054	25	FSM	ENSMUSG00000027699.20	ENSMUST00000108300.8	4086	25	20	12	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	27207990	27151382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27202943_27203037_27203141_27203222_27204177_27204330_27207865
ENSMUSG00000027699.20_1	chr3	-	3993	24	FSM	ENSMUSG00000027699.20	ENSMUST00000108298.9	4024	24	19	12	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	27208008	27151382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207851
ENSMUSG00000027699.20_2	chr3	-	3970	24	FSM	ENSMUSG00000027699.20	ENSMUST00000176242.9	3985	24	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAGTATCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	27207999	27151382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_27152638_27154976_27155121_27156543_27156652_27169544_27169700_27171926_27172066_27176109_27176230_27176545_27176625_27178051_27178134_27181027_27181125_27181882_27181994_27184202_27184272_27185933_27186054_27191173_27191311_27192650_27192874_27192996_27193060_27193162_27193279_27193680_27193812_27195774_27195849_27199100_27199209_27200104_27200195_27200985_27201169_27203141_27203222_27204177_27204330_27207865
ENSMUSG00000027706.9_0	chr3	+	3948	8	FSM	ENSMUSG00000027706.9	ENSMUST00000029256.9	3967	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAGTACGCAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	30847034	30875404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648
ENSMUSG00000027706.9_11	chr3	+	1350	8	ISM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	6805	8	6805	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTACTTATTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30854286	30873891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873150_30873729
ENSMUSG00000027706.9_4	chr3	+	1408	9	FSM	ENSMUSG00000027706.9	ENST00000480708.5	1416	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTACTTATTATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	30847481	30873891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_30847533_30854279_30854389_30855208_30855315_30863970_30864176_30864593_30864687_30866444_30866506_30868382_30868503_30872648_30873150_30873729
ENSMUSG00000027708.15_0	chr3	-	4969	7	FSM	ENSMUSG00000027708.15	ENSMUST00000108182.10	4980	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTTTTATTGCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35987610	35946253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986933
ENSMUSG00000027708.15_1	chr3	-	4428	7	FSM	ENSMUSG00000027708.15	ENSMUST00000178098.8	4434	7	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCTTTTATTGCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35986478	35946254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35986341
ENSMUSG00000027708.15_10	chr3	-	759	6	FSM	ENSMUSG00000027708.15	ENST00000406773.1	775	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAGCACTAAAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	35975328	35949775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_35949846_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ENSMUSG00000027708.15_5	chr3	-	897	7	FSM	ENSMUSG00000027708.15	ENST00000469954.5	914	7	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAACGGAAAATGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	35991574	35949726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119_35975337_35991496
ENSMUSG00000027708.15_6	chr3	-	819	6	ISM	ENSMUSG00000027708.15	ENSMUST00000198389.5	3020	7	8886	2073	0	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAACGGAAAATGCACA	NA	NA	NA	NA	NA	NA	NA	NA	35975337	35949727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_35949849_35951612_35951710_35951941_35952025_35970368_35970500_35973149_35973319_35975119
ENSMUSG00000027709.10_0	chr3	-	2435	19	FSM	ENSMUSG00000027709.10	ENSMUST00000029259.10	2455	19	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAATAAGACTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	36054817	36013991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36014279_36015081_36015154_36017733_36017842_36018475_36018614_36022572_36022623_36026626_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929_36050067_36051673_36051721_36054629
ENSMUSG00000027709.10_10	chr3	-	1692	14	FSM	ENSMUSG00000027709.10	ENST00000492597.5	1707	14	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAATCAGGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	36048156	36017738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36017842_36018475_36018614_36022572_36022623_36026629_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064
ENSMUSG00000027709.10_8	chr3	-	1704	14	FSM	ENSMUSG00000027709.10	ENST00000610757.4	1722	14	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAATCAGGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	36050059	36017738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36017842_36018475_36018614_36022572_36022623_36026629_36026714_36028222_36028440_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36048064_36048161_36049929
ENSMUSG00000027709.10_9	chr3	-	1607	14	FSM	ENSMUSG00000027709.10	ENST00000629669.2	1627	14	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAATCAGGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	36050057	36017738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36017842_36018475_36018614_36022572_36022623_36026629_36026714_36029943_36030054_36030809_36030994_36033071_36033200_36037881_36037964_36039130_36039243_36043992_36044115_36044197_36044346_36044845_36044968_36048064_36048161_36049929
ENSMUSG00000027710.15_0	chr3	+	3907	18	FSM	ENSMUSG00000027710.15	ENSMUST00000011492.15	3930	18	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATATTAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36120134	36146986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36120420_36123858_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143610_36144230_36144304_36144979
ENSMUSG00000027710.15_13	chr3	+	1846	17	FSM	ENSMUSG00000027710.15	ENST00000681367.1	1856	17	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAACCATGTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	36123862	36145079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36139562_36139692_36141868_36141949_36142636_36142764_36142963_36143042_36143480_36143673_36144158_36144304_36144979
ENSMUSG00000027710.15_17	chr3	+	1094	11	FSM	ENSMUSG00000027710.15	ENST00000681552.1	1105	11	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAACCATGTACCTG	NA	NA	NA	NA	NA	NA	NA	NA	36123863	36145079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36123953_36127655_36127758_36128498_36128606_36129391_36129493_36130124_36130204_36130870_36131046_36132586_36132661_36134369_36134446_36135959_36136031_36136257_36136378_36144979
ENSMUSG00000027712.14_0	chr3	-	1719	13	FSM	ENSMUSG00000027712.14	ENSMUST00000029266.14	1731	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTGTGTAGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36530034	36503074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36503556_36504460_36504584_36504786_36504846_36506335_36506432_36507619_36507714_36511141_36511199_36511607_36511688_36514591_36514683_36516029_36516144_36518116_36518212_36519399_36519485_36529578_36529610_36529721
ENSMUSG00000027713.7_0	chr3	+	883	3	FSM	ENSMUSG00000027713.7	ENSMUST00000029268.7	911	3	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACAGCATTGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36530102	36536437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36530389_36533632_36533717_36535924
ENSMUSG00000027714.12_0	chr3	+	1602	12	FSM	ENSMUSG00000027714.12	ENSMUST00000029269.12	1617	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAACATCTGAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	36606762	36619869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36606901_36607183_36607279_36607954_36608075_36608188_36608292_36608786_36608925_36609630_36609714_36611011_36611145_36615251_36615341_36616166_36616314_36617221_36617407_36619366_36619446_36619577
ENSMUSG00000027715.10_0	chr3	-	2954	8	FSM	ENSMUSG00000027715.10	ENSMUST00000029270.10	2965	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2676	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCATTTGGTGGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36626289	36619014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36620432_36620689_36620824_36621148_36621263_36621872_36622081_36622736_36622961_36623128_36623239_36624884_36625129_36625786
ENSMUSG00000027722.15_0	chr3	+	3275	16	FSM	ENSMUSG00000027722.15	ENSMUST00000108112.10	3295	16	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	37474058	37633239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUSG00000027722.15_4	chr3	+	2884	16	FSM	ENSMUSG00000027722.15	ENSMUST00000029277.13	2890	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	37474446	37633239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37474650_37478662_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37632900
ENSMUSG00000027722.15_6	chr3	+	2893	17	FSM	ENSMUSG00000027722.15	ENSMUST00000198968.2	2916	17	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAGCTAGTTTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	37474477	37633239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37474650_37478659_37478785_37480237_37480396_37484194_37484254_37485781_37486427_37487286_37487417_37487787_37487845_37490790_37490915_37493249_37493506_37502556_37502712_37505791_37506002_37510923_37510978_37512469_37512550_37518680_37518808_37582306_37582472_37584131_37584169_37632900
ENSMUSG00000027739.10_0	chr3	+	3462	2	FSM	ENSMUSG00000027739.10	ENSMUST00000054387.8	3492	2	8	22	8	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	51391394	51403631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51392002_51400776
ENSMUSG00000027742.14_0	chr3	-	3163	19	FSM	ENSMUSG00000027742.14	ENSMUST00000036665.10	3182	19	12	7	-9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGAATGAATACATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	52924646	52889302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914761_52916473_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889_52923034_52924466
ENSMUSG00000027742.14_10	chr3	-	1810	18	FSM	ENSMUSG00000027742.14	ENST00000455146.8	1823	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGTCGATGGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	52923024	52890465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_52890613_52893821_52893902_52896530_52896585_52897379_52897488_52900175_52900344_52900860_52900993_52903428_52903547_52905677_52905770_52907901_52907967_52909666_52909759_52909833_52909963_52914666_52914756_52916469_52916545_52916893_52916977_52917996_52918109_52920326_52920386_52921235_52921308_52922889
ENSMUSG00000027746.14_0	chr3	-	4879	6	FSM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACAGTTTACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53771247	53760803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034_53771092_53771169
ENSMUSG00000027746.14_1	chr3	-	4801	5	ISM	ENSMUSG00000027746.14	ENSMUST00000146598.8	4890	6	160	7	96	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATACAGTTTACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	53771091	53760803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_53765417_53766662_53766696_53767654_53767695_53768635_53768694_53771034
ENSMUSG00000027748.12_0	chr3	+	2987	10	FSM	ENSMUSG00000027748.12	ENST00000625583.2	2996	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAAATGTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	54102112	54225629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54102482_54129613_54130133_54173504_54173842_54187283_54187424_54198451_54198766_54206489_54206686_54209520_54209735_54223037_54223080_54223186_54223277_54224863
ENSMUSG00000027750.17_1	chr3	+	2895	20	FSM	ENSMUSG00000027750.17	ENST00000379742.4	2910	20	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTTCATACCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54270054	54298401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54270147_54273324_54273390_54274921_54275080_54276569_54276735_54277618_54277766_54278251_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54291904_54291995_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_30	chr3	+	2754	18	ISM	ENSMUSG00000027750.17	ENST00000541481.5	2867	19	3278	13	3278	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAACTGAATAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	54273324	54298442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_54273390_54274921_54275080_54276569_54276735_54277618_54277766_54278251_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027750.17_4	chr3	+	2850	19	FSM	ENSMUSG00000027750.17	ENST00000541481.5	2867	19	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAATAAACTAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54270054	54298446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54270147_54273324_54273390_54274921_54275080_54276569_54276735_54277618_54277766_54278251_54278394_54279424_54279638_54280190_54280326_54281125_54281275_54282438_54282576_54283457_54283589_54284110_54284242_54284331_54284435_54284585_54284654_54284981_54285028_54292628_54292707_54293091_54293176_54296759_54296802_54297682
ENSMUSG00000027751.14_0	chr3	+	2749	27	FSM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTACATACCAATCGCA	NA	NA	NA	NA	NA	NA	NA	NA	54600228	54636056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54600281_54600523_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027751.14_13	chr3	+	1952	20	FSM	ENSMUSG00000027751.14	ENSMUST00000170552.6	1968	20	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCTTTGTCAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	54600540	54624257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608907_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624058
ENSMUSG00000027751.14_8	chr3	+	2680	26	ISM	ENSMUSG00000027751.14	ENSMUST00000197502.5	2751	27	305	9	7	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTCCTGTACATAC	NA	NA	NA	NA	NA	NA	NA	NA	54600532	54636048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_54600630_54602543_54602629_54603904_54603941_54604371_54604431_54606013_54606081_54608910_54609038_54610491_54610596_54614280_54614398_54614508_54614563_54615677_54615818_54616451_54616609_54616693_54616751_54617821_54617894_54619512_54619671_54620596_54620624_54621153_54621187_54622108_54622218_54622574_54622678_54622954_54623111_54624996_54625067_54625654_54625813_54627826_54627883_54629941_54630062_54633390_54633497_54634989_54635118_54635764
ENSMUSG00000027752.16_0	chr3	-	1279	11	FSM	ENSMUSG00000027752.16	ENSMUST00000029316.16	1300	11	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATATTTCTAGTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	54642800	54636105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639639_54640120_54640167_54641078_54641153_54641523_54641588_54641716_54641754_54642428
ENSMUSG00000027752.16_4	chr3	-	705	8	ISM	ENSMUSG00000027752.16	ENST00000406079.1	742	9	156	10	156	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACACAAAGAAGTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	54641577	54636258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639664_54641059_54641153_54641523
ENSMUSG00000027752.16_5	chr3	-	732	9	FSM	ENSMUSG00000027752.16	ENST00000406079.1	742	9	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACACAAAGAAGTGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	54641733	54636258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639664_54641059_54641153_54641523_54641588_54641716
ENSMUSG00000027752.16_6	chr3	-	645	7	ISM	ENSMUSG00000027752.16	ENST00000406079.1	742	9	584	13	584	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGAGACACAAAGAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	54641149	54636261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_54636315_54636614_54636722_54637185_54637307_54638495_54638593_54639401_54639448_54639532_54639664_54641059
ENSMUSG00000027763.14_10	chr3	+	5451	9	FSM	ENSMUSG00000027763.14	ENSMUST00000194069.6	5460	9	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAACTTCTCTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	60408700	60537145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60532544_60532620_60533800
ENSMUSG00000027763.14_12	chr3	+	5134	9	FSM	ENSMUSG00000027763.14	ENSMUST00000193517.6	5151	9	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATATTTGTGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	60436463	60537164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60522103_60522158_60523040_60523195_60529566_60529662_60532544_60532620_60533800
ENSMUSG00000027763.14_15	chr3	+	4541	8	FSM	ENSMUSG00000027763.14	ENSMUST00000192607.6	4552	8	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGTGGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60436575	60536796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60523040_60523195_60528843_60528880_60532544_60532620_60533800
ENSMUSG00000027763.14_16	chr3	+	919	7	FSM	ENSMUSG00000027763.14	ENST00000465907.6	945	7	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTAGAGCTGTCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	60437069	60532593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60437226_60503014_60503186_60520683_60520942_60523040_60523195_60528843_60528880_60529566_60529662_60532544
ENSMUSG00000027763.14_17	chr3	+	1002	7	FSM	ENSMUSG00000027763.14	ENST00000485509.5	1019	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTAGAGCTGTCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	60437060	60532593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60529566_60529662_60531399_60531463_60532544
ENSMUSG00000027763.14_2	chr3	+	5635	10	FSM	ENSMUSG00000027763.14	ENSMUST00000099087.8	5655	10	13	7	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATATTTGTGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	60408612	60537164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_60408845_60436176_60437226_60503014_60503186_60511114_60511316_60520683_60520942_60523040_60523195_60528843_60528880_60529566_60529662_60532544_60532620_60533800
ENSMUSG00000027770.6_2	chr3	-	3316	24	FSM	ENSMUSG00000027770.6	ENST00000308361.10	3334	24	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTCAGCTAACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	62414283	62377512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_62378169_62378742_62378896_62379419_62379541_62380148_62380240_62380350_62380451_62382690_62382775_62384926_62385101_62386740_62386840_62388222_62388341_62391551_62391696_62392375_62392441_62394430_62394487_62395550_62395639_62395965_62396069_62396318_62396460_62399771_62399854_62401150_62401318_62401760_62401840_62402878_62402959_62404149_62404321_62405510_62405550_62408254_62408490_62409394_62409520_62414138
ENSMUSG00000027774.17_0	chr3	+	4064	18	FSM	ENSMUSG00000027774.17	ENSMUST00000077271.9	4078	18	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTTTTCTTCCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67337441	67383861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67337656_67338982_67339136_67340687_67340821_67342837_67343043_67345878_67345996_67347434_67347586_67350887_67351043_67352105_67352191_67357011_67357150_67358631_67358734_67361002_67361060_67363905_67364044_67365220_67365304_67375139_67375303_67376798_67376944_67380795_67380957_67381885_67381940_67382051
ENSMUSG00000027775.10_0	chr3	+	2992	16	FSM	ENSMUSG00000027775.10	ENSMUST00000029344.10	3011	16	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCTATTTGGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	67490083	67511561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67490311_67491976_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272_67507386_67507925_67507974_67508654_67508713_67510027
ENSMUSG00000027775.10_11	chr3	+	1138	12	FSM	ENSMUSG00000027775.10	ENST00000576210.1	1139	12	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCCCCGTGGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	67491976	67507388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67492030_67492930_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_17	chr3	+	1076	11	ISM	ENSMUSG00000027775.10	ENST00000576210.1	1139	12	963	1	963	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGCCCCGTGGCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	67492939	67507388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_67493044_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501741_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027775.10_8	chr3	+	1160	12	FSM	ENSMUSG00000027775.10	ENST00000392813.8	1168	12	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGTGCCCCGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	67490158	67507385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67490311_67491980_67492030_67494633_67494677_67495250_67495319_67497163_67497273_67499902_67500006_67501631_67501731_67502100_67502213_67503501_67503559_67503926_67504084_67505360_67505459_67507272
ENSMUSG00000027776.13_0	chr3	+	1274	8	FSM	ENSMUSG00000027776.13	ENSMUST00000029345.12	1303	8	24	5	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCACAGATGTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	68598000	68605875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68598075_68598823_68598900_68599355_68599490_68601493_68601608_68602522_68602565_68602637_68602680_68602769_68602914_68605227
ENSMUSG00000027776.13_2	chr3	+	1198	7	FSM	ENSMUSG00000027776.13	ENSMUST00000107816.4	1268	7	66	4	66	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTTCACAGATGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	68598822	68605872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68598900_68599355_68599490_68601493_68601608_68602522_68602565_68602637_68602680_68602769_68602914_68605227
ENSMUSG00000027777.16_0	chr3	+	2057	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182532.8	2059	8	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAAGCACTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68375515	68533812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68375563_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_1	chr3	+	1505	7	FSM	ENSMUSG00000027777.16	ENST00000460298.3	1523	7	10	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTGAACTTGGGAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	68401540	68528444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68401703_68401906_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305
ENSMUSG00000027777.16_3	chr3	+	2137	8	FSM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATACGTCCTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	68401554	68533791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68401703_68401906_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027777.16_9	chr3	+	1532	7	FSM	ENSMUSG00000027777.16	ENSMUST00000182997.3	1557	7	19	6	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGATACGTCCTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	68491530	68533791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68491758_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000027778.16_0	chr3	-	4033	20	FSM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	33	-2	6	2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGGTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68911870	68799855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831_68901916_68911764
ENSMUSG00000027778.16_1	chr3	-	3877	19	ISM	ENSMUSG00000027778.16	ENSMUST00000169064.8	4064	20	10033	3	0	-3	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCACAATAAAAAGGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	68901870	68799860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074_68898295_68901831
ENSMUSG00000027778.16_14	chr3	-	3823	18	ISM	ENSMUSG00000027778.16	ENSMUST00000029347.14	3880	19	3585	9	3585	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTACCACAATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	68898285	68799866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_68801515_68805817_68805942_68821944_68822118_68822226_68822317_68823424_68823597_68825289_68825438_68825822_68825959_68835059_68835125_68838154_68838319_68843179_68843255_68847418_68847538_68857686_68857867_68869512_68869651_68870955_68871046_68875179_68875290_68892747_68892817_68895216_68895328_68898074
ENSMUSG00000027782.11_0	chr3	-	8799	17	FSM	ENSMUSG00000027782.11	ENSMUST00000029353.9	8819	17	12	8	-9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTCTCACATGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	69034434	68974489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ENSMUSG00000027782.11_6	chr3	-	3375	16	FSM	ENSMUSG00000027782.11	ENST00000678765.1	3393	16	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACATTAAAACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	69034245	68979592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68997108_68997154_68997240_68997411_69000142_69000230_69001985_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673_69008764_69009536_69009582_69034064
ENSMUSG00000027782.11_7	chr3	-	1444	15	FSM	ENSMUSG00000027782.11	ENST00000402742.1	1453	15	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGAAGATGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	69008759	68981429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_68981521_68984082_68984178_68986709_68986873_68988491_68988564_68991382_68991488_68993019_68993149_68994789_68994922_68997108_68997154_68997240_68997411_69000142_69000230_69001981_69002072_69002852_69002949_69008384_69008438_69008534_69008565_69008673
ENSMUSG00000027784.11_0	chr3	+	9395	4	FSM	ENSMUSG00000027784.11	ENSMUST00000029355.9	9417	4	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATTCTTTTCCTTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	69224209	69468129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_69225299_69405103_69405279_69456658_69456821_69460160
ENSMUSG00000027787.15_0	chr3	+	9120	16	FSM	ENSMUSG00000027787.15	ENSMUST00000029358.15	9135	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTTGAAGTCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	69629328	69663702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_69629456_69629741_69629800_69631589_69631725_69633693_69633791_69636670_69636752_69637737_69637867_69638897_69638989_69642378_69642458_69643325_69643423_69647252_69647371_69648841_69648988_69650848_69650962_69652545_69652619_69654061_69654169_69655630_69655702_69656104
ENSMUSG00000027794.5_0	chr3	+	2355	11	FSM	ENSMUSG00000027794.5	ENSMUST00000029369.5	2364	11	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATAATAGTGTGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55089450	55117371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55089536_55096541_55096757_55097730_55097793_55097874_55097980_55099659_55099757_55102493_55102605_55104147_55104296_55104418_55104508_55111754_55111877_55115013_55115271_55116307
ENSMUSG00000027796.3_0	chr3	+	5354	6	FSM	ENSMUSG00000027796.3	ENSMUST00000029371.3	5368	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAAGCTTGTGAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	54663013	54708675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54663116_54689575_54690194_54693484_54693743_54696606_54696829_54701652_54701910_54704778
ENSMUSG00000027797.16_0	chr3	+	7952	17	FSM	ENSMUSG00000027797.16	ENSMUST00000196745.5	7962	17	2	8	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACAATGCCCTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	55149786	55446481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55150173_55154551_55154948_55163285_55163633_55288201_55288302_55358387_55358505_55370421_55370517_55385225_55385311_55387754_55387864_55394727_55394786_55395212_55395333_55397170_55397318_55407455_55407590_55409793_55409872_55410232_55410327_55414121_55414203_55424293_55424408_55440990
ENSMUSG00000027797.16_2	chr3	+	6006	7	FSM	ENSMUSG00000027797.16	ENSMUST00000167204.8	6025	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACTGCCTTCGTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	55149957	55378729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55150173_55154551_55154948_55163285_55163633_55288201_55288302_55358387_55358505_55370421_55370517_55373993
ENSMUSG00000027797.16_4	chr3	+	5180	3	FSM	ENSMUSG00000027797.16	ENSMUST00000199585.5	5196	3	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTTCGTTGTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	55369157	55378732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55369504_55370421_55370517_55373993
ENSMUSG00000027799.13_3	chr3	-	675	4	FSM	ENSMUSG00000027799.13	ENST00000420638.2	686	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTTTCTTTGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	55998530	55965370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_55965505_55966053_55966252_55992667_55992790_55998309
ENSMUSG00000027800.15_0	chr3	-	3352	7	FSM	ENSMUSG00000027800.15	ENSMUST00000196979.5	3372	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATAGTAGTTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	57209346	57193040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57195192_57197109_57197291_57200200_57200347_57200433_57200524_57202032_57202504_57208942_57209058_57209148
ENSMUSG00000027800.15_1	chr3	-	2838	5	FSM	ENSMUSG00000027800.15	ENSMUST00000171384.8	2855	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATAGTAGTTGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57202301	57193039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57195192_57197109_57197291_57200200_57200347_57200433_57200524_57202032
ENSMUSG00000027800.15_5	chr3	-	1417	6	FSM	ENSMUSG00000027800.15	ENSMUST00000029376.13	1436	6	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAGAGCTAACTATT	NA	NA	NA	NA	NA	NA	NA	NA	57209402	57194916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57195192_57197109_57197291_57200200_57200347_57200433_57200524_57202032_57202504_57209148
ENSMUSG00000027803.15_0	chr3	-	4682	7	FSM	ENSMUSG00000027803.15	ENSMUST00000029380.14	4697	7	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGGCCTTTGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57483235	57363070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483021
ENSMUSG00000027803.15_1	chr3	-	4504	7	FSM	ENSMUSG00000027803.15	ENSMUST00000120977.2	4533	7	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAATCCAGTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57483307	57363207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57366532_57369939_57370053_57370863_57370986_57384777_57384978_57409152_57409290_57482243_57482679_57483134
ENSMUSG00000027804.14_0	chr3	+	1740	10	FSM	ENSMUSG00000027804.14	ENSMUST00000029382.13	1752	10	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCTGGATGTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	79498680	79510954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_79498865_79500916_79501058_79502508_79502616_79504991_79505181_79506098_79506222_79506358_79506466_79507564_79507707_79509578_79509666_79509749_79509793_79510337
ENSMUSG00000027805.17_0	chr3	-	2322	3	FSM	ENSMUSG00000027805.17	ENSMUST00000066882.10	2342	3	10	10	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTCCATTGGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57755490	57749325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57750736_57752594_57752788_57754771
ENSMUSG00000027805.17_1	chr3	-	1301	2	FSM	ENSMUSG00000027805.17	ENST00000481767.5	1311	2	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGACAGATGAAATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	57752782	57749355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57750469_57752594
ENSMUSG00000027805.17_2	chr3	-	699	3	FSM	ENSMUSG00000027805.17	ENST00000490975.1	709	3	10	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAACCTTTATCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	57754965	57750378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57750736_57752639_57752788_57754771
ENSMUSG00000027806.10_0	chr3	+	4646	3	FSM	ENSMUSG00000027806.10	ENSMUST00000199164.2	4659	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	58322150	58369138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_58325035_58366751_58366804_58367428
ENSMUSG00000027808.9_0	chr3	-	4594	3	FSM	ENSMUSG00000027808.9	ENSMUST00000029385.9	4611	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAATTATTAGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	58433303	58427244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_58431290_58432503_58432580_58432830
ENSMUSG00000027809.15_1	chr3	-	2361	13	FSM	ENSMUSG00000027809.15	ENSMUST00000029386.14	2377	13	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACCTTTCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	79536158	79511098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ENSMUSG00000027809.15_14	chr3	-	1805	12	FSM	ENSMUSG00000027809.15	ENST00000307738.5	1820	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGACACTAGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79535956	79511314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79511473_79512211_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79535824
ENSMUSG00000027809.15_36	chr3	-	2169	14	FSM	ENSMUSG00000027809.15	ENST00000684622.1	2185	14	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGGAGGAGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	79536041	79511348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79511473_79511584_79511756_79512207_79512434_79512936_79513120_79517105_79517275_79519218_79519363_79520928_79521070_79522306_79522454_79523230_79523309_79525613_79525733_79526145_79526228_79530044_79530275_79530847_79530986_79535824
ENSMUSG00000027810.15_0	chr3	+	2280	14	FSM	ENSMUSG00000027810.15	ENSMUST00000029387.15	2299	14	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTTTTTGCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58433253	58464915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_58433508_58438507_58438578_58444954_58445030_58446948_58447068_58448460_58448561_58449054_58449138_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_11	chr3	+	1653	10	ISM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	6450	6	6450	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAGTATGTAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58444955	58464796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_58445030_58446948_58447068_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027810.15_7	chr3	+	1723	11	FSM	ENSMUSG00000027810.15	ENST00000406576.7	1732	11	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAGTATGTAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	58438508	58464796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_58438578_58444954_58445030_58446948_58447068_58452415_58452490_58452648_58452794_58452920_58453038_58455813_58456386_58459989_58460104_58462955_58463073_58463993_58464060_58464541
ENSMUSG00000027811.10_0	chr3	+	1951	2	FSM	ENSMUSG00000027811.10	ENSMUST00000029388.10	1970	2	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTACAAGTAAATTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	79536390	79540113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_79536664_79538435
ENSMUSG00000027822.17_1	chr3	-	3130	6	FSM	ENSMUSG00000027822.17	ENSMUST00000029402.15	3150	6	9	11	9	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACTATAAATCTCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	63872180	63849761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_63850838_63851986_63852203_63854989_63855108_63855492_63855678_63861234_63861426_63870836
ENSMUSG00000027822.17_2	chr3	-	2627	4	FSM	ENSMUSG00000027822.17	ENST00000646424.1	2656	4	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAATTTAAATGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	63872005	63849780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_63850838_63851986_63852203_63855492_63855678_63870836
ENSMUSG00000027823.10_0	chr3	+	8083	16	FSM	ENSMUSG00000027823.10	ENSMUST00000029405.8	8105	16	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCAAGAAATTTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	63883536	63929988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_63883732_63887556_63887739_63889831_63889947_63893020_63893119_63895079_63895184_63897575_63897770_63897937_63898104_63900611_63900764_63901220_63901395_63904227_63904334_63906022_63906139_63908933_63909060_63918977_63919094_63921674_63921806_63922845_63923019_63924053
ENSMUSG00000027827.18_0	chr3	+	3628	13	FSM	ENSMUSG00000027827.18	ENST00000618897.4	3652	13	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGGCATCTGCAATCT	NA	NA	NA	NA	NA	NA	NA	NA	65016316	65285618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_65017414_65173911_65173956_65202685_65202724_65205089_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278871_65283899
ENSMUSG00000027827.18_11	chr3	+	1228	11	ISM	ENSMUSG00000027827.18	ENST00000389636.9	1289	12	28780	11	28780	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGAAACAGGATATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	65202689	65284367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_65202724_65205089_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278867_65283899
ENSMUSG00000027827.18_14	chr3	+	1195	10	ISM	ENSMUSG00000027827.18	ENST00000389636.9	1289	12	31180	10	31180	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAACAGGATATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	65205089	65284368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278867_65283899
ENSMUSG00000027827.18_6	chr3	+	1278	12	FSM	ENSMUSG00000027827.18	ENST00000389636.9	1289	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGAAACAGGATATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	65173909	65284367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_65173956_65202685_65202724_65205089_65205170_65207008_65207054_65209568_65209614_65211540_65211585_65263684_65263771_65264442_65264564_65265668_65265764_65272022_65272144_65278777_65278867_65283899
ENSMUSG00000027828.13_0	chr3	-	2938	5	FSM	ENSMUSG00000027828.13	ENSMUST00000029414.12	2957	5	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTGTTTTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	65300034	65287084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65289456_65290412_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUSG00000027828.13_7	chr3	-	766	5	FSM	ENSMUSG00000027828.13	ENST00000476217.5	786	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGAAACTCAGAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	65299957	65289193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65289456_65290398_65290545_65295152_65295252_65298745_65298873_65299825
ENSMUSG00000027829.16_0	chr3	-	2157	11	FSM	ENSMUSG00000027829.16	ENSMUST00000029416.14	2169	11	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGTTTCAAATATCT	NA	NA	NA	NA	NA	NA	NA	NA	65865663	65853576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65854370_65855111_65855211_65855317_65855430_65855682_65855825_65855916_65856022_65856111_65856212_65857900_65857966_65858854_65858976_65864273_65864384_65864921_65864997_65865228
ENSMUSG00000027829.16_6	chr3	-	557	4	FSM	ENSMUSG00000027829.16	ENST00000295925.5	567	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCATGGCAACAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	65865540	65862637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65862698_65864273_65864384_65864921_65864997_65865228
ENSMUSG00000027832.6_0	chr3	+	1886	3	FSM	ENSMUSG00000027832.6	ENSMUST00000029421.6	1898	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTAGCCCGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	66127334	66133218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_66127613_66128070_66128473_66132012
ENSMUSG00000027833.17_0	chr3	-	3275	5	FSM	ENSMUSG00000027833.17	ENST00000483851.7	3283	5	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTGGTGATATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	66889269	66879047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_66881241_66882776_66882866_66883185_66883244_66885518_66885728_66888543
ENSMUSG00000027833.17_5	chr3	-	3067	5	FSM	ENSMUSG00000027833.17	ENSMUST00000029422.14	3079	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGGGGTGCGCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	66889093	66879115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_66881277_66882776_66882866_66883185_66883244_66885518_66885728_66888543
ENSMUSG00000027835.12_0	chr3	-	1910	8	FSM	ENSMUSG00000027835.12	ENSMUST00000161137.8	1927	8	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAACTTTGCTATAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	75464150	75423800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_75424909_75428008_75428092_75428337_75428417_75434894_75435022_75436116_75436235_75440847_75440902_75448466_75448686_75464028
ENSMUSG00000027843.14_0	chr3	+	2728	21	FSM	ENSMUSG00000027843.14	ENSMUST00000029433.9	2743	21	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGTTTATGCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	103767601	103819557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103767807_103780960_103781070_103781296_103781374_103781495_103781592_103781980_103782020_103783048_103783121_103783221_103783282_103783910_103784054_103784620_103784688_103786893_103786972_103789365_103789453_103792637_103792715_103792842_103793658_103795827_103795912_103796050_103796173_103797571_103797600_103809429_103809508_103810685_103810802_103812471_103812503_103816696_103816775_103819291
ENSMUSG00000027845.16_0	chr3	-	4091	3	FSM	ENSMUSG00000027845.16	ENSMUST00000063502.13	4113	3	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACATTTGTATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	103716678	103707926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103711372_103714709_103714893_103716215
ENSMUSG00000027845.16_1	chr3	-	4320	4	FSM	ENSMUSG00000027845.16	ENSMUST00000029435.15	4345	4	19	6	-14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACATTTGTATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	103716741	103707926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103711372_103714709_103714893_103715387_103715554_103716215
ENSMUSG00000027845.16_2	chr3	-	1760	3	FSM	ENSMUSG00000027845.16	ENST00000650596.1	1785	3	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACACCAGAGAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	103716783	103710345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103711372_103715387_103715554_103716215
ENSMUSG00000027848.13_0	chr3	-	5437	3	FSM	ENSMUSG00000027848.13	ENSMUST00000029440.10	5465	3	9	19	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1801	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	103645308	103638999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103643980_103644267_103644554_103645137
ENSMUSG00000027849.20_0	chr3	+	2900	8	FSM	ENSMUSG00000027849.20	ENST00000641643.2	2924	8	11	13	2	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	2350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAACAAAAATGAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	103482598	103541002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103482857_103492657_103493007_103494548_103495111_103528101_103528223_103532812_103532985_103534297_103534428_103538217_103538286_103539762
ENSMUSG00000027852.15_0	chr3	+	4455	7	FSM	ENSMUSG00000027852.15	ENSMUST00000029445.13	4470	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATTTTCCCTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	102965608	102975223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102965757_102966220_102966349_102967516_102967696_102969689_102969850_102970645_102970770_102971431_102971474_102971549
ENSMUSG00000027854.13_0	chr3	+	7353	5	FSM	ENSMUSG00000027854.13	ENSMUST00000029447.12	7375	5	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACATGAAAATCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	102903033	102915763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102903284_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027854.13_7	chr3	+	1216	5	FSM	ENSMUSG00000027854.13	ENST00000369528.9	1240	5	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGTAAGCCGGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	102903133	102909715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102903295_102903471_102903578_102904558_102904702_102905805_102905920_102909023
ENSMUSG00000027855.14_0	chr3	-	2396	25	FSM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATATTATGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	102841579	102727854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_102727999_102748177_102748358_102752347_102752405_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520
ENSMUSG00000027855.14_1	chr3	-	2406	25	ISM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	1462	0	1462	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATATTATGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	102840117	102727854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958
ENSMUSG00000027855.14_2	chr3	-	2329	24	ISM	ENSMUSG00000027855.14	ENST00000613524.4	2396	25	1464	0	1464	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATATTATGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	102840115	102727854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_102727999_102748177_102748358_102752347_102752405_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958
ENSMUSG00000027855.14_3	chr3	-	2471	26	FSM	ENSMUSG00000027855.14	ENST00000369518.1	2471	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAACATATTATGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	102841579	102727854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_102727999_102748177_102748358_102752347_102752405_102758879_102758955_102759434_102759528_102760703_102760815_102761426_102761544_102772172_102772236_102772389_102772453_102786089_102786172_102800853_102800925_102803170_102803289_102806169_102806274_102807347_102807453_102816221_102816284_102820736_102820805_102822471_102822657_102823119_102823215_102827844_102827954_102829703_102829778_102830316_102830387_102832516_102832576_102836564_102836639_102838943_102839012_102839958_102840124_102841520
ENSMUSG00000027859.11_1	chr3	+	1143	3	ISM	ENSMUSG00000027859.11	ENSMUST00000106925.9	1187	4	39787	7	-4240	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCGACACTTGAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	102417030	102428322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_102417154_102421271_102421396_102427426
ENSMUSG00000027859.11_2	chr3	+	927	2	FSM	ENSMUSG00000027859.11	ENST00000681124.1	945	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTCAAAGCATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102421281	102428302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102421396_102427489
ENSMUSG00000027860.16_0	chr3	-	6522	8	FSM	ENSMUSG00000027860.16	ENSMUST00000029453.13	6531	8	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCCATAGTGCAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	102112001	102060899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111827
ENSMUSG00000027860.16_5	chr3	-	3192	8	FSM	ENSMUSG00000027860.16	ENSMUST00000159388.8	3207	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	102111267	102064035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_102065814_102070614_102070721_102072690_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107_102104293_102111138
ENSMUSG00000027860.16_6	chr3	-	2505	8	FSM	ENSMUSG00000027860.16	ENST00000355485.7	2528	8	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTATCACAAGGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	102104197	102064408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_102064649_102064887_102065814_102070614_102070850_102072670_102072804_102074153_102074288_102091266_102091875_102096724_102096864_102104107
ENSMUSG00000027861.14_0	chr3	+	2542	11	FSM	ENSMUSG00000027861.14	ENSMUST00000029454.12	2556	11	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCGAGGCTATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101993740	102053826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_101994189_102017555_102017641_102020380_102020482_102024179_102024292_102027232_102027307_102033864_102033996_102035256_102035303_102040692_102040748_102049495_102049597_102051469_102051545_102052512
ENSMUSG00000027864.10_0	chr3	-	5881	9	FSM	ENSMUSG00000027864.10	ENSMUST00000102694.4	5902	9	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTAAATCAGACTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	101017582	100947556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_100950839_100952759_100953066_100957405_100957514_100963551_100963972_100967952_100968379_100980125_100980507_100984358_100984773_100987443_100987813_101017407
ENSMUSG00000027865.11_0	chr3	+	2989	14	FSM	ENSMUSG00000027865.11	ENSMUST00000029459.10	3008	14	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAAGGAATTCTATAAG	NA	NA	NA	NA	NA	NA	NA	NA	100069706	100114288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_100069982_100077251_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087
ENSMUSG00000027865.11_5	chr3	+	2820	14	FSM	ENSMUSG00000027865.11	ENST00000369443.10	2836	14	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTGTCTTTATAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100077312	100114517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_100077492_100078213_100078354_100085158_100085313_100085549_100085639_100089992_100090070_100093885_100094046_100095189_100095350_100098201_100098279_100098942_100099020_100101805_100101946_100103858_100103914_100109289_100109434_100113087_100113480_100113541
ENSMUSG00000027868.12_0	chr3	+	3550	8	FSM	ENSMUSG00000027868.12	ENSMUST00000029462.10	3566	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTTTTCTGTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	99161085	99261569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_99161402_99216145_99216360_99220328_99220431_99222059_99222232_99223506_99223675_99233699_99233765_99247865_99247964_99259154
ENSMUSG00000027878.12_0	chr3	+	898	4	FSM	ENSMUSG00000027878.12	ENST00000650865.1	909	4	9	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGAGCTCTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	97920857	97980236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_97921088_97955051_97955126_97978175_97978436_97979902
ENSMUSG00000027878.12_1	chr3	+	10484	34	FSM	ENSMUSG00000027878.12	ENSMUST00000079812.8	10500	34	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCAAAGCTCAGTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	97920862	98057670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_97921088_97955043_97955126_97978175_97978436_97979902_97980239_97989232_97989356_98005411_98005646_98006739_98006896_98007515_98007705_98008836_98008951_98009641_98009756_98011664_98011899_98014362_98014474_98018865_98019059_98020325_98020472_98022547_98022662_98024016_98024137_98024508_98024662_98028042_98028272_98029219_98029422_98031060_98031215_98031464_98031650_98033427_98033561_98038513_98038751_98041874_98041988_98042641_98043148_98044590_98044945_98045701_98045845_98045957_98046169_98046901_98046999_98048779_98048946_98050208_98050511_98051677_98051826_98052437_98052536_98053368
ENSMUSG00000027879.10_0	chr3	+	2788	5	FSM	ENSMUSG00000027879.10	ENSMUST00000029476.9	2810	5	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTACCTCCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97808518	97830583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_97808737_97814536_97814647_97819894_97820056_97821815_97821963_97828431
ENSMUSG00000027881.15_0	chr3	-	3013	6	FSM	ENSMUSG00000027881.15	ENSMUST00000029480.9	3026	6	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCCTTTATCCTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108819038	108810130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108812079_108812426_108812651_108815102_108815164_108815247_108815400_108815651_108815721_108818479
ENSMUSG00000027882.19_0	chr3	-	2402	19	FSM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	7	10	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAAAATTTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	108747820	108700501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ENSMUSG00000027882.19_2	chr3	-	2317	18	ISM	ENSMUSG00000027882.19	ENSMUST00000102621.11	2419	19	12889	10	12888	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCAAAATTTTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	108734938	108700501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717192_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888
ENSMUSG00000027882.19_4	chr3	-	2394	19	FSM	ENSMUSG00000027882.19	ENST00000370008.4	2424	19	13	17	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAGAAAATAAATATATTA	NA	NA	NA	NA	NA	NA	NA	NA	108747827	108700520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108701181_108702117_108702270_108704696_108704783_108706539_108706633_108707370_108707478_108708050_108708190_108709426_108709508_108710861_108710928_108712373_108712432_108712553_108712650_108717188_108717318_108720193_108720285_108723640_108723796_108729103_108729205_108729830_108729910_108733321_108733399_108734341_108734424_108734888_108734939_108747735
ENSMUSG00000027883.16_0	chr3	-	3479	15	FSM	ENSMUSG00000027883.16	ENSMUST00000029482.16	3498	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTCACCTGTGTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	108629613	108585960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618897_108629356
ENSMUSG00000027883.16_17	chr3	-	1938	13	FSM	ENSMUSG00000027883.16	ENST00000674700.1	1952	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACTAGCAAACCACA	NA	NA	NA	NA	NA	NA	NA	NA	108629535	108586901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108587120_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108629356
ENSMUSG00000027883.16_18	chr3	-	2092	13	FSM	ENSMUSG00000027883.16	ENST00000675086.1	2107	13	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACTAGCAAACCACA	NA	NA	NA	NA	NA	NA	NA	NA	108618887	108586901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592
ENSMUSG00000027883.16_19	chr3	-	2307	15	FSM	ENSMUSG00000027883.16	ENST00000674914.1	2321	15	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAACTAGCAAACCACA	NA	NA	NA	NA	NA	NA	NA	NA	108629535	108586901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108587120_108589321_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610462_108618572_108618665_108629356
ENSMUSG00000027883.16_72	chr3	-	2127	14	FSM	ENSMUSG00000027883.16	ENST00000441735.2	2142	14	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGTGCATTCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	108629535	108589323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108589540_108589987_108590142_108594135_108594316_108597081_108597153_108604264_108604395_108604843_108604953_108606233_108606390_108607979_108608096_108608202_108608327_108609060_108609204_108609714_108609851_108610180_108610403_108618592_108618784_108629356
ENSMUSG00000027884.17_2	chr3	+	2034	12	FSM	ENSMUSG00000027884.17	ENSMUST00000106609.8	2043	12	3	6	3	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATTTTGGTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108561231	108586150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108561297_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027884.17_26	chr3	+	1967	11	ISM	ENSMUSG00000027884.17	ENSMUST00000029483.15	2224	13	7399	2	2	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATTTTGGTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108568672	108586150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027884.17_28	chr3	+	1123	8	FSM	ENSMUSG00000027884.17	ENST00000676454.1	1142	8	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACATCCAGAAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	108568679	108582253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108568812_108569247_108569350_108570839_108570948_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952
ENSMUSG00000027884.17_9	chr3	+	2213	13	FSM	ENSMUSG00000027884.17	ENSMUST00000029483.15	2224	13	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTATTTTGGTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108561282	108586150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108561368_108561907_108562067_108568670_108568812_108569247_108569350_108570839_108570948_108575278_108575501_108576014_108576156_108578217_108578312_108580135_108580234_108580596_108580744_108581952_108582280_108584000_108584295_108585855
ENSMUSG00000027889.18_0	chr3	-	3626	18	FSM	ENSMUSG00000027889.18	ENSMUST00000102638.8	3650	18	14	10	14	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTAATGAGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	107993929	107981387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533
ENSMUSG00000027889.18_1	chr3	-	3565	19	FSM	ENSMUSG00000027889.18	ENSMUST00000102637.8	3586	19	13	8	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATTAATGAGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	107993954	107981387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107993533_107993669_107993754
ENSMUSG00000027889.18_21	chr3	-	3349	18	FSM	ENSMUSG00000027889.18	ENSMUST00000078912.7	3368	18	16	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAGAAATAAAAAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	107992699	107981405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUSG00000027889.18_29	chr3	-	3076	18	FSM	ENSMUSG00000027889.18	ENST00000369840.7	3089	18	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCTGGCCCACTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	107992702	107981714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982813_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUSG00000027889.18_3	chr3	-	3506	17	FSM	ENSMUSG00000027889.18	ENST00000667949.2	3527	17	9	12	-6	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATTATTTAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	107993949	107981396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107993533
ENSMUSG00000027889.18_38	chr3	-	2685	17	FSM	ENSMUSG00000027889.18	ENST00000358729.9	2691	17	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107992644	107981903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107992562
ENSMUSG00000027889.18_39	chr3	-	2606	16	ISM	ENSMUSG00000027889.18	ENST00000358729.9	2691	17	4200	0	1433	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCACCGGGAACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	107988450	107981903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_107982438_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316
ENSMUSG00000027889.18_49	chr3	-	2631	18	FSM	ENSMUSG00000027889.18	ENST00000528454.5	2645	18	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGACTGTGACCGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	107989873	107982193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107982438_107982564_107982676_107982846_107983021_107983286_107983408_107983673_107983838_107983928_107984056_107984334_107984499_107984647_107984780_107984867_107985063_107985995_107986126_107986302_107986393_107986500_107986643_107986902_107987090_107987378_107987491_107987582_107987652_107987959_107988091_107988316_107988448_107989666
ENSMUSG00000027893.15_0	chr3	-	3837	17	FSM	ENSMUSG00000027893.15	ENSMUST00000029490.15	3863	17	11	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATAAGACATTTAG	NA	NA	NA	NA	NA	NA	NA	NA	107603865	107570450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107603473
ENSMUSG00000027893.15_4	chr3	-	2417	17	FSM	ENSMUSG00000027893.15	ENST00000359172.3	2426	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTCTTTTAATTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	107591203	107571763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107572430_107572831_107572953_107574457_107574537_107574955_107575025_107575382_107575482_107575565_107575661_107575982_107576054_107576408_107576498_107577207_107577272_107577519_107577637_107578453_107578561_107579357_107579453_107580751_107580855_107581323_107581425_107582326_107582471_107585035_107585148_107590918
ENSMUSG00000027894.15_0	chr3	-	6306	12	FSM	ENSMUSG00000027894.15	ENSMUST00000169449.8	6322	12	10	6	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCTCTTGCCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107425324	107374864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107378866_107379351_107379515_107380851_107381012_107381587_107381781_107384043_107384237_107384492_107384735_107398735_107398847_107400374_107400557_107401252_107401380_107402981_107403140_107407683_107408057_107424921
ENSMUSG00000027896.16_0	chr3	+	1456	6	FSM	ENSMUSG00000027896.16	ENST00000437429.6	1472	6	9	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTGTCTTTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	107198538	107219365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107198737_107199723_107199842_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_17	chr3	+	1475	7	FSM	ENSMUSG00000027896.16	ENST00000369779.9	1484	7	2	7	2	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTGTCTTTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	107199783	107219365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107199842_107205260_107205394_107206151_107206296_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_23	chr3	+	1332	6	FSM	ENSMUSG00000027896.16	ENST00000472422.6	1340	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTGTCTTTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	107199782	107219365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107199842_107205260_107205394_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027896.16_36	chr3	+	1408	6	ISM	ENSMUSG00000027896.16	ENST00000369779.9	1484	7	5488	7	5488	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTGTCTTTTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	107205269	107219365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_107205394_107206151_107206296_107206435_107206598_107208017_107208537_107210376_107210456_107218985
ENSMUSG00000027900.16_0	chr3	+	3250	9	FSM	ENSMUSG00000027900.16	ENSMUST00000067630.13	3271	9	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACTCCACAATTGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	106455126	106483198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_10	chr3	+	1832	6	ISM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	4287	7	4287	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTCTCTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106459474	106482154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ENSMUSG00000027900.16_12	chr3	+	1965	7	ISM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	7306	7	7298	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTCTCTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106462485	106482154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_6	chr3	+	2024	8	FSM	ENSMUSG00000027900.16	ENSMUST00000121034.8	2035	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTCTCTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106455183	106482154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106455237_106462479_106462625_106469064_106469133_106473360_106473501_106478008_106478187_106478926_106479010_106480288_106480382_106480890
ENSMUSG00000027900.16_8	chr3	+	1884	7	FSM	ENSMUSG00000027900.16	ENSMUST00000029507.13	1891	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTTTCTCTTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	106455187	106482154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106455237_106459471_106459597_106462479_106462625_106469064_106469133_106473360_106473501_106480288_106480382_106480890
ENSMUSG00000027901.13_0	chr3	+	4021	12	FSM	ENSMUSG00000027901.13	ENSMUST00000029508.11	4050	12	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTTACCACATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	106389768	106410339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106390030_106394188_106394365_106395166_106395280_106395887_106395958_106397650_106397729_106398541_106398683_106399744_106399894_106402146_106402325_106406133_106406176_106406536_106406622_106407070_106407311_106407851
ENSMUSG00000027905.16_0	chr3	-	2890	11	FSM	ENSMUSG00000027905.16	ENSMUST00000090680.11	2905	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAATGTCAGTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	105594882	105585592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_105587029_105587659_105587762_105587865_105587972_105588296_105588380_105590041_105590101_105590192_105590332_105590468_105590612_105590731_105590847_105591600_105591770_105593954_105594050_105594439
ENSMUSG00000027907.5_0	chr3	+	503	3	FSM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACACTGAGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	93427796	93433588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_93427861_93431357_93431507_93433298
ENSMUSG00000027907.5_1	chr3	+	435	2	ISM	ENSMUSG00000027907.5	ENSMUST00000029515.5	511	3	3567	6	3567	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACACTGAGAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	93431361	93433588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_93431507_93433298
ENSMUSG00000027919.6_0	chr3	-	915	2	FSM	ENSMUSG00000027919.6	ENSMUST00000029527.6	925	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAATGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	92659645	92657464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92658329_92659594
ENSMUSG00000027919.6_1	chr3	-	863	1	ISM	ENSMUSG00000027919.6	ENSMUST00000029527.6	925	2	1318	10	1318	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTAAATGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	92658327	92657464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_92657500_92658300
ENSMUSG00000027932.15_1	chr3	-	2231	10	FSM	ENSMUSG00000027932.15	ENSMUST00000029541.12	2259	10	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTATCTGGCCCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90297212	90292551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90292841_90293556_90293688_90293786_90293885_90294054_90294254_90294370_90294462_90294561_90294757_90294942_90295068_90295634_90295794_90295996_90296207_90296478
ENSMUSG00000027933.12_0	chr3	-	4038	31	FSM	ENSMUSG00000027933.12	ENSMUST00000071488.8	4038	31	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGACATCTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	90340610	90298694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90299219_90299299_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUSG00000027933.12_3	chr3	-	4323	30	FSM	ENSMUSG00000027933.12	ENSMUST00000029542.12	4337	30	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCTTTTGTGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	90340830	90298710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90299413_90299518_90299676_90299834_90299908_90300097_90300199_90300402_90300571_90301052_90301102_90301380_90301495_90301629_90301706_90302444_90302514_90303684_90303839_90307610_90307731_90307901_90307947_90308374_90308479_90308711_90308767_90309149_90309280_90309614_90309735_90310385_90310493_90310812_90310905_90311291_90311372_90311820_90311909_90313480_90313673_90315808_90315907_90317304_90317435_90318507_90318653_90320836_90320904_90322464_90322550_90322799_90322914_90329042_90329127_90331310_90331395_90340110
ENSMUSG00000027935.15_0	chr3	+	1398	8	FSM	ENSMUSG00000027935.15	ENSMUST00000107373.8	1415	8	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAACCTGGCAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	90121013	90133687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90121130_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027935.15_1	chr3	+	1092	8	FSM	ENSMUSG00000027935.15	ENSMUST00000065418.7	1107	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGTCCCATTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	90128105	90133273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90128330_90129543_90129605_90130833_90130895_90131096_90131175_90131800_90131891_90132008_90132075_90132154_90132209_90132815
ENSMUSG00000027936.19_0	chr3	+	2726	14	FSM	ENSMUSG00000027936.19	ENSMUST00000029545.15	2747	14	13	8	13	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTTGTGTGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	90161482	90171424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90161866_90164423_90164526_90164601_90164719_90165771_90165834_90166460_90166530_90166692_90166800_90166889_90166920_90167069_90167135_90167260_90167311_90167432_90167678_90168003_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUSG00000027936.19_12	chr3	+	1592	5	FSM	ENSMUSG00000027936.19	ENST00000368630.7	1615	5	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATTAAACCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90161645	90171416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90161812_90168065_90168411_90169757_90170022_90170477_90170665_90170786
ENSMUSG00000027937.16_0	chr3	+	1083	5	FSM	ENSMUSG00000027937.16	ENSMUST00000029546.15	1101	5	10	8	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTTCCTTTAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90138913	90143137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90139348_90139501_90139540_90139735_90139819_90141229_90141310_90142689
ENSMUSG00000027939.12_0	chr3	+	5674	40	FSM	ENSMUSG00000027939.12	ENSMUST00000200410.2	5710	40	27	9	27	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAGAGGACTGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	90011467	90119346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90011665_90014205_90014343_90022361_90022494_90025839_90025934_90027173_90027325_90029993_90030127_90031513_90031673_90036422_90036492_90039626_90039734_90041869_90042011_90043355_90043494_90044152_90044309_90051465_90051665_90058409_90058556_90061775_90061998_90067136_90067311_90075040_90075234_90076600_90076690_90077296_90077402_90077865_90077972_90079359_90079485_90081636_90081765_90083144_90083278_90087456_90087520_90088677_90088858_90089189_90089271_90089786_90089919_90092731_90092891_90093338_90093431_90096727_90096907_90098163_90098336_90100261_90100480_90105357_90105495_90107105_90107230_90109223_90109374_90111014_90111263_90114589_90114792_90117660_90117766_90119062_90119138_90119223
ENSMUSG00000027940.19_1	chr3	+	2216	9	FSM	ENSMUSG00000027940.19	ENSMUST00000119570.8	2233	9	10	7	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89979967	90008202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89980158_89981026_89981153_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_14	chr3	+	2212	8	FSM	ENSMUSG00000027940.19	ENSMUST00000029549.16	2230	8	12	6	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89986858	90008202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_90006834
ENSMUSG00000027940.19_28	chr3	+	1505	9	FSM	ENSMUSG00000027940.19	ENST00000328159.9	1525	9	9	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAATAAGACAATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	89986963	90007521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_35	chr3	+	2035	9	FSM	ENSMUSG00000027940.19	ENST00000330188.13	2046	9	10	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89986964	90008202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_90006834_90007542_90007612
ENSMUSG00000027940.19_43	chr3	+	2178	9	FSM	ENSMUSG00000027940.19	ENSMUST00000118566.8	2190	9	11	1	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATCAGACCGGCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	89986971	90008202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89987171_89993752_89993887_89994761_89994880_89994980_89995052_89996354_89996431_89997103_89997167_89997316_89997387_89998319_89998399_90006834
ENSMUSG00000027940.19_8	chr3	+	1101	10	FSM	ENSMUSG00000027940.19	ENST00000368530.7	1116	10	7	8	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCACGGCCTCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	89979991	89999435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89980158_89981026_89981153_89993752_89993887_89994761_89994880_89994980_89995052_89995707_89995784_89997103_89997167_89997316_89997387_89998319_89998399_89999237
ENSMUSG00000027942.18_0	chr3	+	1339	9	FSM	ENSMUSG00000027942.18	ENSMUST00000159064.8	1344	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAACATTTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89958942	89969320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89959001_89959907_89960093_89960206_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000027942.18_1	chr3	+	1282	8	ISM	ENSMUSG00000027942.18	ENSMUST00000159064.8	1344	9	964	5	-214	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTAACATTTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89959906	89969320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89960093_89960206_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000027944.14_0	chr3	-	1129	7	FSM	ENSMUSG00000027944.14	ENSMUST00000079724.9	1139	7	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGGTTTTGTCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	89905995	89902753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904882_89905044_89905311_89905834
ENSMUSG00000027944.14_4	chr3	-	1058	7	FSM	ENSMUSG00000027944.14	ENSMUST00000197767.5	1092	7	26	8	-20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAAAGGTCTTAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	89905947	89902767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89903018_89903120_89903212_89903317_89903425_89903553_89903606_89904693_89904873_89905044_89905311_89905834
ENSMUSG00000027947.12_0	chr3	-	8622	10	FSM	ENSMUSG00000027947.12	ENSMUST00000197679.5	8639	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCATTTCTAGCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	89820493	89771372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786200_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ENSMUSG00000027947.12_2	chr3	-	3335	10	FSM	ENSMUSG00000027947.12	ENSMUST00000029559.7	3343	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGGGGATCGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	89820462	89776631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89778694_89784115_89784216_89785150_89785221_89786155_89786203_89793208_89793351_89793848_89794016_89794328_89794514_89796493_89796618_89797543_89797781_89820261
ENSMUSG00000027950.8_0	chr3	-	6394	6	FSM	ENSMUSG00000027950.8	ENSMUST00000029562.5	6399	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCACAAGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	89671934	89659739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89664578_89667978_89668949_89669705_89669816_89670316_89670362_89670526_89670673_89671649
ENSMUSG00000027951.17_0	chr3	+	5895	15	FSM	ENSMUSG00000027951.17	ENSMUST00000098924.9	5909	15	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAGCATCAGGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89622330	89660741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89622458_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUSG00000027951.17_2	chr3	+	5841	15	FSM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCAGGACTGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	89638076	89660745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89638146_89642148_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUSG00000027951.17_3	chr3	+	5776	14	ISM	ENSMUSG00000027951.17	ENSMUST00000107405.6	5871	15	4090	8	4090	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCAGGACTGTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	89642144	89660745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89643581_89645296_89645481_89646476_89646626_89647139_89647279_89647400_89647586_89652682_89652909_89653126_89653299_89653871_89653966_89654478_89654602_89654844_89654979_89656943_89657127_89657542_89657656_89657934_89658063_89658235
ENSMUSG00000027952.17_0	chr3	+	1177	5	FSM	ENSMUSG00000027952.17	ENSMUST00000029564.12	1194	5	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCAGAGCTGGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	89366434	89376313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89366772_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUSG00000027952.17_2	chr3	+	1139	5	FSM	ENSMUSG00000027952.17	ENSMUST00000184515.2	1156	5	14	3	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACAGCTCAGAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	89366891	89376310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89367194_89369188_89369253_89371602_89371756_89374853_89374984_89375820
ENSMUSG00000027953.14_0	chr3	-	1013	6	FSM	ENSMUSG00000027953.14	ENSMUST00000029565.11	1022	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGAGTGATGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89177868	89175552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177133_89177258_89177368_89177447_89177692
ENSMUSG00000027953.14_4	chr3	-	449	3	ISM	ENSMUSG00000027953.14	ENST00000484157.5	535	4	930	6	930	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCATGGATGCAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	89176518	89175738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89175906_89175979_89176100_89176356
ENSMUSG00000027953.14_5	chr3	-	525	4	FSM	ENSMUSG00000027953.14	ENST00000484157.5	535	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCATGGATGCAATAGG	NA	NA	NA	NA	NA	NA	NA	NA	89177444	89175738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89175906_89175979_89176100_89176356_89176519_89177368
ENSMUSG00000027954.10_0	chr3	-	1465	5	FSM	ENSMUSG00000027954.10	ENSMUST00000029566.9	1480	5	8	7	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACATGCTTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89186944	89179046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89186757
ENSMUSG00000027954.10_1	chr3	-	1608	5	FSM	ENSMUSG00000027954.10	ENSMUST00000118587.8	1632	5	20	4	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACATGCTTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89188429	89179046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89179912_89180078_89180130_89180263_89180330_89183436_89183733_89188099
ENSMUSG00000027954.10_3	chr3	-	1390	4	FSM	ENSMUSG00000027954.10	ENSMUST00000118860.2	1403	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACATGCTTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	89186935	89179046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89179912_89180078_89180130_89183436_89183733_89186757
ENSMUSG00000027955.17_0	chr3	+	2262	5	FSM	ENSMUSG00000027955.17	ENST00000296530.12	2280	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACGTGAAACTGACGCAG	NA	NA	NA	NA	NA	NA	NA	NA	79792167	79848912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_79792534_79793294_79794438_79815895_79816111_79843901_79844129_79848601
ENSMUSG00000027956.12_0	chr3	-	2886	12	FSM	ENSMUSG00000027956.12	ENSMUST00000029568.7	2898	12	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAAAAACTATTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79749986	79719882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79749694
ENSMUSG00000027956.12_3	chr3	-	2193	12	FSM	ENSMUSG00000027956.12	ENSMUST00000168038.8	2220	12	7	20	7	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGGGAAAAAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	79749029	79720459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79721454_79724323_79724378_79728564_79728663_79729937_79730058_79732585_79732705_79734129_79734207_79734921_79735004_79739368_79739450_79741214_79741315_79743540_79743664_79746444_79746614_79748853
ENSMUSG00000027957.14_0	chr3	-	5706	8	FSM	ENSMUSG00000027957.14	ENSMUST00000029569.9	5725	8	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCAGTAGTTCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	116506280	116463118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116505731
ENSMUSG00000027957.14_1	chr3	-	1777	6	FSM	ENSMUSG00000027957.14	ENST00000640715.1	1800	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATATTGAATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	116488268	116466349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078
ENSMUSG00000027957.14_3	chr3	-	1806	9	FSM	ENSMUSG00000027957.14	ENST00000427993.7	1826	9	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCCATACGATTTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	116505902	116466731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116467368_116468819_116468954_116471511_116471631_116474753_116474926_116480710_116480834_116480919_116481075_116488078_116488284_116495603_116495695_116505731
ENSMUSG00000027957.14_7	chr3	-	855	5	FSM	ENSMUSG00000027957.14	ENST00000639221.1	863	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGTTTGAAAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116488274	116467154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116467368_116471511_116471631_116474753_116474926_116480919_116481075_116488078
ENSMUSG00000027959.15_0	chr3	+	2372	17	FSM	ENSMUSG00000027959.15	ENSMUST00000198311.5	2404	17	14	18	12	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGTAAAAAAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	116388670	116422778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_116388828_116397110_116397172_116398845_116398926_116399313_116399419_116400971_116401144_116402032_116402099_116403912_116404033_116407554_116407747_116411904_116412100_116412208_116412299_116412372_116412553_116412899_116412982_116413706_116413841_116415031_116415158_116420721_116420817_116422166_116422262_116422356
ENSMUSG00000027962.15_0	chr3	-	3454	9	FSM	ENSMUSG00000027962.15	ENSMUST00000029574.13	3469	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAACTTAATGAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	115923329	115903604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_10	chr3	-	2193	7	ISM	ENSMUSG00000027962.15	ENST00000370119.8	2287	8	2533	4	2533	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCAGGTCAGAACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115919924	115904212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603
ENSMUSG00000027962.15_18	chr3	-	2508	5	FSM	ENSMUSG00000027962.15	ENSMUST00000196449.5	2532	5	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAATAGTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115923091	115915937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115917443_115918031_115918299_115919603_115919925_115922181_115922458_115922952
ENSMUSG00000027962.15_5	chr3	-	2437	7	FSM	ENSMUSG00000027962.15	ENST00000347652.6	2453	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTACTACTTTCTAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	115922449	115903960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115918031_115918299_115919603_115919925_115922181
ENSMUSG00000027962.15_8	chr3	-	2277	8	FSM	ENSMUSG00000027962.15	ENST00000370119.8	2287	8	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCAGGTCAGAACGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115922451	115904212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115904687_115908001_115908269_115909533_115909801_115910871_115911193_115914446_115914723_115918031_115918299_115919603_115919925_115922367
ENSMUSG00000027963.15_0	chr3	+	2981	5	FSM	ENSMUSG00000027963.15	ENSMUST00000029575.12	3000	5	10	9	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGAGCGGGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	115801120	115822657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115801532_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUSG00000027963.15_1	chr3	+	2878	4	FSM	ENSMUSG00000027963.15	ENSMUST00000106501.8	2887	4	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGCCACTGTGTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	115801132	115822641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115801532_115817655_115818084_115818973_115819045_115820661
ENSMUSG00000027963.15_2	chr3	+	2832	5	FSM	ENSMUSG00000027963.15	ENSMUST00000106502.2	2840	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTCATCCACTGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	115801876	115822609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115802187_115804270_115804346_115817655_115818084_115818973_115819045_115820661
ENSMUSG00000027966.21_0	chr3	+	5393	65	FSM	ENSMUSG00000027966.21	ENST00000512756.5	5420	65	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTTACGCCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	113824278	114012531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888165_113888283_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199_113907254_113907366_113907412_113908582_113908637_113909134_113909180_113909379_113909434_113910118_113910164_113915038_113915093_113917404_113917450_113917823_113917878_113917956_113918002_113923022_113923077_113925207_113925316_113926784_113926839_113932048_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997_113958106_113958884_113958939_113960625_113960680_113961130_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866_114006936_114010619_114010854_114012329
ENSMUSG00000027966.21_3	chr3	+	7068	66	FSM	ENSMUSG00000027966.21	ENST00000353414.8	7086	66	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTGGTCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	113824272	114013969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888849_113888943_113890648_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199_113907254_113907366_113907412_113908582_113908637_113909134_113909180_113909379_113909434_113910118_113910164_113915038_113915093_113917404_113917450_113917823_113917878_113917956_113918002_113923022_113923077_113925207_113925316_113926784_113926839_113932048_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997_113958106_113958884_113958939_113960625_113960680_113961130_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866_114006936_114010619_114010854_114012329
ENSMUSG00000027966.21_8	chr3	+	7224	67	FSM	ENSMUSG00000027966.21	ENST00000358392.6	7240	67	9	7	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTGGTCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	113824269	114013969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_113824653_113849243_113849412_113855012_113855227_113860060_113860224_113883780_113883907_113888509_113888663_113888849_113888943_113890648_113890904_113891475_113891539_113892724_113892767_113893439_113893503_113895087_113895163_113896183_113896268_113899038_113899096_113901929_113901984_113905683_113905738_113905853_113905908_113906066_113906121_113907199_113907254_113907366_113907412_113908582_113908637_113909134_113909180_113909379_113909434_113910118_113910164_113915038_113915093_113917404_113917450_113917823_113917878_113917956_113918002_113923022_113923077_113925207_113925316_113926784_113926839_113932048_113932103_113932226_113932272_113932392_113932447_113932569_113932615_113936692_113936747_113941418_113941473_113945023_113945078_113946257_113946366_113946747_113946838_113947289_113947344_113951733_113951842_113957997_113958106_113958884_113958939_113960625_113960680_113961130_113961239_113966998_113967053_113974990_113975045_113976261_113976316_113978506_113978561_113979144_113979253_113979530_113979585_113980176_113980231_113981346_113981401_113987536_113987591_113987721_113987830_113988378_113988433_113998472_113998527_113999427_113999536_114000016_114000071_114000173_114000210_114000302_114000357_114001759_114002010_114005721_114005835_114006866_114006936_114010619_114010854_114012329
ENSMUSG00000027968.12_0	chr3	-	1946	12	FSM	ENSMUSG00000027968.12	ENST00000344442.10	1981	12	30	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAATTGTTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127341167	127330369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337775_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010
ENSMUSG00000027968.12_4	chr3	-	2103	13	FSM	ENSMUSG00000027968.12	ENSMUST00000029588.10	2121	13	11	7	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATAATTGTTTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127346987	127330369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_127330684_127334193_127334286_127334447_127334608_127336680_127336806_127337802_127337928_127339474_127339620_127339695_127340053_127340124_127340219_127340302_127340468_127340569_127340654_127340738_127340840_127341010_127341196_127346831
ENSMUSG00000027977.16_0	chr3	-	5553	14	FSM	ENSMUSG00000027977.16	ENSMUST00000154668.8	5570	14	8	9	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATAGAGATGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	123484494	123319825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_123322580_123324732_123324836_123340417_123340528_123342520_123342692_123346154_123346330_123350440_123350565_123353848_123353946_123355550_123355734_123395089_123395219_123400494_123400681_123421607_123421763_123427901_123427990_123464989_123466127_123484353
ENSMUSG00000027978.10_0	chr3	+	2579	11	FSM	ENSMUSG00000027978.10	ENSMUST00000029603.10	2602	11	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCAGAAATGACAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	123240574	123300236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_123241286_123258385_123258537_123271625_123271805_123273213_123273356_123276322_123276520_123279071_123279214_123280605_123280812_123283204_123283284_123285150_123285274_123298926_123299208_123299868
ENSMUSG00000027981.15_0	chr3	-	3865	15	FSM	ENSMUSG00000027981.15	ENSMUST00000092154.10	3888	15	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAAGATTTAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	113423775	113398715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_113400949_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUSG00000027981.15_1	chr3	-	1827	15	FSM	ENSMUSG00000027981.15	ENSMUST00000106536.8	1839	15	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTGTCTAATTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	113423788	113399114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_113399297_113401988_113402061_113402686_113402820_113404706_113404766_113404857_113404953_113407406_113407566_113409011_113409161_113410396_113410523_113413673_113413817_113414757_113414827_113415480_113415593_113416014_113416099_113418587_113418707_113421993_113422042_113423511
ENSMUSG00000027983.14_0	chr3	-	4361	5	FSM	ENSMUSG00000027983.14	ENSMUST00000106337.7	4378	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGACCGTGTCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	131096862	131082095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_131084957_131087165_131087334_131089036_131089199_131091434_131092071_131096328
ENSMUSG00000027983.14_3	chr3	-	1680	4	FSM	ENSMUSG00000027983.14	ENSMUST00000200236.2	1716	4	9	27	9	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAATAAATAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131096840	131086963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_131087334_131089036_131089199_131091434_131092071_131096328
ENSMUSG00000027984.9_0	chr3	-	1766	8	FSM	ENSMUSG00000027984.9	ENSMUST00000029610.9	1789	8	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAATTATAAACATGGGC	NA	NA	NA	NA	NA	NA	NA	NA	131065740	131027080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131038808_131038936_131042064_131042223_131043451_131043581_131065524
ENSMUSG00000027984.9_6	chr3	-	508	5	FSM	ENSMUSG00000027984.9	ENST00000638621.1	531	5	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACAAGTGACACTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	131065645	131027829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_131027937_131029191_131029309_131034585_131034659_131036164_131036255_131065524
ENSMUSG00000027985.15_0	chr3	+	3472	12	FSM	ENSMUSG00000027985.15	ENSMUST00000029611.14	3482	12	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCGAGTTGGTGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	130904122	131017998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_130905328_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130984671_130984756_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ENSMUSG00000027985.15_3	chr3	+	1412	11	FSM	ENSMUSG00000027985.15	ENST00000510624.5	1422	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACCCCAAGGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	130906074	131016832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_130906470_130907504_130907572_130909061_130909196_130978291_130978425_130982983_130983075_130986777_130986901_130988273_130988437_130993943_130994052_130997904_130997954_130998581_130998623_131016724
ENSMUSG00000027993.17_0	chr3	-	7417	12	FSM	ENSMUSG00000027993.17	ENSMUST00000107691.8	7428	12	7	4	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGACTGAGTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	84167112	84067750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84072557_84074958_84075100_84078766_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84117479_84117662_84166631
ENSMUSG00000027993.17_3	chr3	-	1961	9	FSM	ENSMUSG00000027993.17	ENST00000433687.2	1977	9	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTGTCTAGTTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	84178047	84078719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84078838_84080071_84080241_84084938_84085107_84085381_84085486_84097819_84098544_84099387_84099569_84100527_84100680_84115480_84115719_84177940
ENSMUSG00000027994.15_0	chr3	-	1301	8	FSM	ENSMUSG00000027994.15	ENSMUST00000029624.15	1318	8	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCGCACTCCAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	129763847	129708617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129708836_129709351_129709469_129710587_129710792_129712234_129712396_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027994.15_2	chr3	-	987	7	FSM	ENSMUSG00000027994.15	ENSMUST00000153506.8	1005	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGCAAAGTATTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	129763714	129708637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129708836_129709351_129709469_129710587_129710792_129720013_129720119_129727231_129727403_129728273_129728350_129763598
ENSMUSG00000027995.11_0	chr3	-	3003	3	FSM	ENSMUSG00000027995.11	ENSMUST00000029623.11	3014	3	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAGGAGACCGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83749072	83743587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_83746097_83748195_83748444_83748826
ENSMUSG00000027996.14_0	chr3	+	1985	3	FSM	ENSMUSG00000027996.14	ENSMUST00000029625.8	2003	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATTCTTTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83673638	83681616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_83674351_83676632_83676714_83680424
ENSMUSG00000027997.10_0	chr3	+	1443	7	FSM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTATTTTATGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	129695079	129707745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129695156_129699114_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027997.10_3	chr3	+	1367	6	ISM	ENSMUSG00000027997.10	ENSMUST00000029626.9	1456	7	4041	7	4041	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTATTTTATGGCACTC	NA	NA	NA	NA	NA	NA	NA	NA	129699114	129707745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_129699157_129699551_129699702_129700049_129700127_129704171_129704348_129705766_129705924_129706980
ENSMUSG00000027998.12_0	chr3	+	1828	15	FSM	ENSMUSG00000027998.12	ENSMUST00000150268.8	1851	15	11	12	11	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAAGAATTCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	82962839	82979650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_82962962_82964077_82964185_82965962_82966106_82966633_82966688_82967143_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027998.12_4	chr3	+	1486	13	FSM	ENSMUSG00000027998.12	ENST00000302078.9	1504	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGTCTTCATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	82964087	82979470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_82964185_82965962_82966106_82967119_82967235_82968340_82968429_82973188_82973288_82973985_82974079_82975304_82975455_82975565_82975668_82976268_82976372_82976999_82977109_82977903_82978044_82978496_82978691_82979417
ENSMUSG00000027999.16_0	chr3	+	1546	4	FSM	ENSMUSG00000027999.16	ENSMUST00000029629.15	1561	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCCTGAGAGTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129672263	129689468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129672585_129682529_129682607_129683916_129684083_129688486
ENSMUSG00000028005.14_0	chr3	-	3136	13	FSM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCGCATTAATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	81981367	81939348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223_81945462_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547_81965667_81968326_81968477_81981279
ENSMUSG00000028005.14_1	chr3	-	3049	12	ISM	ENSMUSG00000028005.14	ENST00000652626.1	3148	13	12902	0	12902	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGCGCATTAATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	81968477	81939348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_81940589_81941618_81941746_81942048_81942204_81942586_81942728_81945223_81945462_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547_81965667_81968326
ENSMUSG00000028005.14_21	chr3	-	1726	12	FSM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGGTATGGCTCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	81981376	81941624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_81941746_81942048_81942204_81942586_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547_81965667_81968326_81968428_81981304
ENSMUSG00000028005.14_22	chr3	-	1653	11	ISM	ENSMUSG00000028005.14	ENST00000503520.5	1736	12	12953	7	12953	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGGTATGGCTCATTAG	NA	NA	NA	NA	NA	NA	NA	NA	81968426	81941624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_81941746_81942048_81942204_81942586_81942728_81945223_81945363_81947032_81947231_81950426_81950561_81951435_81951553_81952705_81952937_81953819_81954018_81965547_81965667_81968326
ENSMUSG00000028007.14_0	chr3	-	2002	9	FSM	ENSMUSG00000028007.14	ENSMUST00000029639.12	2021	9	12	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTCCAAAGTAGGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	117662573	117575302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117632468_117632634_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028007.14_5	chr3	-	1593	8	FSM	ENSMUSG00000028007.14	ENST00000529992.5	1611	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATCTTTAATAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117662571	117575544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_117576026_117594489_117594643_117623225_117623313_117626488_117626689_117630786_117630986_117633576_117633688_117640162_117640346_117662392
ENSMUSG00000028010.17_0	chr3	-	1252	7	FSM	ENSMUSG00000028010.17	ENSMUST00000029643.15	1271	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACGTTTATTGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	129625032	129618566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129618859_129619196_129619266_129620472_129620624_129622553_129622614_129622985_129623141_129624243_129624503_129624766
ENSMUSG00000028013.17_0	chr3	+	1207	12	FSM	ENSMUSG00000028013.17	ENSMUST00000029644.16	1226	12	11	8	-1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAACTTCTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133015881	133083831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083607
ENSMUSG00000028013.17_15	chr3	+	675	8	FSM	ENSMUSG00000028013.17	ENST00000348706.9	682	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133028330	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133028378_133032408_133032463_133036153_133036274_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_22	chr3	+	713	8	ISM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	4080	7	4080	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133032410	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_23	chr3	+	625	7	ISM	ENSMUSG00000028013.17	ENST00000348706.9	682	8	4081	7	4081	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133032411	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_133032463_133036153_133036274_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_4	chr3	+	1353	12	FSM	ENSMUSG00000028013.17	ENSMUST00000122334.8	1368	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATTACTATTATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	133015890	133083989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133016043_133026696_133026762_133028332_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079454_133082309_133082350_133083610
ENSMUSG00000028013.17_42	chr3	+	446	5	FSM	ENSMUSG00000028013.17	ENST00000432483.6	460	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133053832	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_45	chr3	+	317	4	FSM	ENSMUSG00000028013.17	ENST00000354147.7	334	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133073593	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028013.17_8	chr3	+	762	9	FSM	ENSMUSG00000028013.17	ENST00000341695.10	769	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGATGGGGACACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	133028330	133083630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_133028378_133032408_133032463_133036153_133036274_133045023_133045111_133053824_133053952_133073583_133073712_133076140_133076227_133079383_133079474_133083607
ENSMUSG00000028015.4_0	chr3	+	3455	8	FSM	ENSMUSG00000028015.4	ENSMUST00000029649.3	3468	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81839918	81864030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_81840083_81848838_81848945_81849499_81849640_81852168_81852337_81853620_81853743_81858679_81858844_81859505_81859599_81861532
ENSMUSG00000028015.4_1	chr3	+	831	6	FSM	ENSMUSG00000028015.4	ENST00000680553.1	842	6	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGATCATGACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81848846	81859650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_81848945_81849499_81849640_81852168_81852337_81853626_81853743_81858679_81858844_81859505
ENSMUSG00000028016.10_0	chr3	+	3072	7	FSM	ENSMUSG00000028016.10	ENSMUST00000029650.9	3101	7	16	13	16	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACTTAAAAATGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	132797616	132816736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_132797738_132802508_132802674_132804170_132804324_132806383_132806569_132808117_132808278_132812699_132812847_132814595
ENSMUSG00000028017.8_0	chr3	-	2894	19	FSM	ENSMUSG00000028017.8	ENST00000509793.5	2910	19	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGGTAACTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	129533683	129479840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129480002_129484419_129484565_129486566_129486690_129490439_129490566_129491366_129491484_129496113_129496231_129499752_129499900_129500857_129501026_129504901_129505126_129506602_129506708_129510278_129510428_129511572_129511710_129512705_129512832_129513879_129514003_129516918_129517042_129529450_129529654_129530405_129530631_129531043_129531226_129533490
ENSMUSG00000028018.16_0	chr3	-	3500	12	FSM	ENSMUSG00000028018.16	ENSMUST00000029651.11	3503	12	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCCTCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	132797583	132687512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790336_132790787_132797340
ENSMUSG00000028018.16_3	chr3	-	1888	12	FSM	ENSMUSG00000028018.16	ENST00000394730.7	1897	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGACGGGCACTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	132797574	132688849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132688981_132692145_132692216_132701926_132701958_132704585_132704720_132709424_132709554_132711148_132711194_132711320_132711437_132768326_132768421_132777660_132777913_132787799_132788268_132790602_132790787_132797340
ENSMUSG00000028019.10_1	chr3	+	3503	6	FSM	ENSMUSG00000028019.10	ENSMUST00000029652.4	3521	6	8	10	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTAAGTGTTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80943730	81121337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768
ENSMUSG00000028019.10_2	chr3	+	2885	7	FSM	ENSMUSG00000028019.10	ENST00000502773.6	2897	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGTAAGTGTTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80944289	81121337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_80944862_81048711_81048908_81082122_81082304_81111541_81111750_81116350_81116569_81119768_81119882_81119940
ENSMUSG00000028020.17_0	chr3	-	3012	10	FSM	ENSMUSG00000028020.17	ENSMUST00000029654.15	3029	10	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATTTGCTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	80820957	80750912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_80752565_80758214_80758508_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ENSMUSG00000028020.17_1	chr3	-	2341	9	FSM	ENSMUSG00000028020.17	ENST00000541722.5	2363	9	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTACAAAACAATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	80820914	80751247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_80752565_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274_80819426_80820823
ENSMUSG00000028020.17_2	chr3	-	2248	8	ISM	ENSMUSG00000028020.17	ENST00000541722.5	2363	9	1499	14	-30	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATGTTACAAAACAATGA	NA	NA	NA	NA	NA	NA	NA	NA	80819426	80751250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_80752565_80763091_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274
ENSMUSG00000028020.17_6	chr3	-	1081	7	ISM	ENSMUSG00000028020.17	ENSMUST00000107743.8	1101	8	1409	9	-30	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTACCTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	80819426	80762944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_80763245_80767467_80767609_80769009_80769093_80769198_80769429_80785315_80785384_80786932_80787040_80819274
ENSMUSG00000028023.17_1	chr3	+	1928	5	FSM	ENSMUSG00000028023.17	ENSMUST00000174661.9	1942	5	8	6	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAATTGGTCTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	128993534	129013233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_128993812_128997585_128997642_128998088_128998227_129009287_129009494_129011982
ENSMUSG00000028023.17_2	chr3	+	1740	4	FSM	ENSMUSG00000028023.17	ENSMUST00000106382.11	1757	4	10	7	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAATTGGTCTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	128993584	129013233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_128993812_128997585_128997642_129009287_129009494_129011982
ENSMUSG00000028023.17_4	chr3	+	2261	3	FSM	ENSMUSG00000028023.17	ENSMUST00000042587.12	2271	3	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAATTGGTCTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	129007626	129013233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129008431_129009287_129009494_129011982
ENSMUSG00000028024.15_4	chr3	-	4092	20	FSM	ENSMUSG00000028024.15	ENST00000265162.10	4118	20	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAATAAAAATTATATATG	NA	NA	NA	NA	NA	NA	NA	NA	129126310	129062852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129064072_129064993_129065073_129070290_129070432_129074071_129074243_129074333_129074439_129074550_129074625_129075192_129075344_129077516_129077573_129077698_129077833_129086854_129086935_129092478_129092631_129092746_129092813_129097363_129097430_129099055_129099186_129102666_129102785_129103417_129103573_129106209_129106331_129113028_129113161_129115008_129115151_129125510
ENSMUSG00000028028.12_0	chr3	-	3568	12	FSM	ENSMUSG00000028028.12	ENST00000504176.6	3588	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCAAACAAGTAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	127523089	127464602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_127464781_127466008_127466196_127466968_127467132_127471334_127471489_127473009_127475102_127477156_127477262_127477990_127478087_127478886_127478964_127479905_127479993_127481230_127481291_127489202_127489402_127522919
ENSMUSG00000028029.12_0	chr3	-	868	5	FSM	ENSMUSG00000028029.12	ENST00000442366.6	882	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTGGTTTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132382886	132366247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132380509_132380624_132382765
ENSMUSG00000028029.12_3	chr3	-	1024	6	ISM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	6746	10	-5	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATAAAATATGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	132382899	132366269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765
ENSMUSG00000028029.12_5	chr3	-	1109	7	FSM	ENSMUSG00000028029.12	ENSMUST00000029663.11	1126	7	7	10	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATAAAATATGTCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	132389638	132366269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132366503_132373145_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765_132382900_132389553
ENSMUSG00000028029.12_6	chr3	-	1001	6	FSM	ENSMUSG00000028029.12	ENST00000684504.1	1019	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCACTTACATATAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	132382884	132366276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132366498_132373141_132373315_132377739_132377949_132379725_132379891_132380509_132380624_132382765
ENSMUSG00000028030.13_0	chr3	+	6565	26	FSM	ENSMUSG00000028030.13	ENSMUST00000169172.5	6578	26	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTCTCGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	132389917	132547449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_132390156_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUSG00000028030.13_4	chr3	+	6560	26	NNC	ENSMUSG00000028030.13	novel	6578	26	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGTAGTCTCGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	132389926	132547449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_132390160_132392532_132392754_132400143_132400217_132411273_132411389_132413545_132413620_132421349_132421492_132424380_132424442_132426281_132426344_132428066_132428129_132428428_132428578_132430536_132430676_132431421_132431522_132432417_132432468_132432811_132432942_132437926_132438026_132440107_132440171_132440478_132440606_132441834_132441886_132443265_132443350_132448762_132448849_132456947_132456985_132458268_132458431_132480181_132480358_132507264_132507441_132520950_132521111_132543721
ENSMUSG00000028031.7_0	chr3	+	3684	4	FSM	ENSMUSG00000028031.7	ENSMUST00000029665.7	3705	4	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTTGAATGCAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	131791062	131886054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_131792016_131879544_131879696_131880729_131880886_131883630
ENSMUSG00000028032.14_1	chr3	+	2585	12	FSM	ENSMUSG00000028032.14	ENSMUST00000029666.14	2600	12	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATTTATGGTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	131270538	131349427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_131270745_131285071_131285187_131288141_131288378_131288847_131288987_131290808_131290928_131305625_131305740_131307735_131307848_131311605_131311812_131313088_131313225_131324781_131325051_131337346_131337577_131348724
ENSMUSG00000028034.16_0	chr3	+	6510	20	FSM	ENSMUSG00000028034.16	ENSMUST00000166984.8	6523	20	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATGATGAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	151916065	151942457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923471_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028034.16_17	chr3	+	2526	20	FSM	ENSMUSG00000028034.16	ENSMUST00000200524.5	2552	20	18	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCCTGTGTCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	151916136	151938401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151937891
ENSMUSG00000028034.16_45	chr3	+	5860	21	FSM	ENSMUSG00000028034.16	ENST00000370768.7	5878	21	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATGATGAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	151916239	151942457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931846_151933807_151933883_151937513_151937660_151938031_151941491_151941960
ENSMUSG00000028034.16_8	chr3	+	2360	20	FSM	ENSMUSG00000028034.16	ENSMUST00000196695.5	2374	20	7	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCCTGTGTCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	151916162	151938401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_151916338_151919613_151919705_151921228_151921268_151923045_151923086_151923468_151923522_151923612_151923685_151923849_151923908_151925320_151925484_151925569_151925669_151925772_151925875_151926101_151926205_151926322_151926424_151926903_151927046_151927720_151927882_151928465_151928618_151928922_151929003_151931716_151931855_151933807_151933883_151937513_151937660_151938031
ENSMUSG00000028035.14_0	chr3	-	2437	3	FSM	ENSMUSG00000028035.14	ENSMUST00000050073.13	2464	3	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAATGTGAAGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	151899466	151889602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151891018_151892051_151892621_151899013
ENSMUSG00000028035.14_1	chr3	-	2444	4	FSM	ENSMUSG00000028035.14	ENSMUST00000144950.8	2459	4	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGAGTCCTATAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	151915712	151889625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151891018_151892051_151892621_151899013_151899256_151915471
ENSMUSG00000028036.7_0	chr3	-	6619	3	FSM	ENSMUSG00000028036.7	ENSMUST00000029670.7	6624	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAGATCGCCACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	151543267	151502143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151507564_151540708_151541579_151542938
ENSMUSG00000028040.8_0	chr3	-	1584	4	FSM	ENSMUSG00000028040.8	ENSMUST00000029674.8	1599	4	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAAAAACCACCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89245330	89240706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89241740_89242088_89242158_89242483_89242780_89245144
ENSMUSG00000028041.18_1	chr3	-	2782	21	FSM	ENSMUSG00000028041.18	ENSMUST00000074582.7	2799	21	10	7	-6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTGGAATGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89257272	89246961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253316_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_11	chr3	-	2591	22	FSM	ENSMUSG00000028041.18	ENST00000359280.8	2599	22	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89257248	89247194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_12	chr3	-	2448	20	FSM	ENSMUSG00000028041.18	ENST00000360674.8	2457	20	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89257247	89247194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_13	chr3	-	2524	21	FSM	ENSMUSG00000028041.18	ENST00000368412.7	2532	21	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89257248	89247194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89248169_89248245_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_14	chr3	-	2661	23	FSM	ENSMUSG00000028041.18	ENST00000449910.6	2674	23	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89257243	89247194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89247707_89247780_89248169_89248245_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255935_89257115
ENSMUSG00000028041.18_15	chr3	-	2522	21	FSM	ENSMUSG00000028041.18	ENST00000531455.5	2529	21	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCAAGCTCTAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	89257220	89247194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89247261_89247361_89247487_89248814_89248885_89249243_89249383_89249595_89249669_89250419_89250498_89250694_89250891_89250979_89251285_89251424_89251518_89251731_89251907_89252012_89252162_89252585_89252671_89252799_89252970_89253075_89253145_89253249_89253310_89254183_89254374_89254458_89254536_89254713_89254793_89255175_89255253_89255824_89255966_89257115
ENSMUSG00000028042.16_0	chr3	-	4325	4	FSM	ENSMUSG00000028042.16	ENSMUST00000107435.8	4333	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCATATTTGTGTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	89294978	89284958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89287302_89287650_89288823_89292968_89293170_89294369
ENSMUSG00000028042.16_1	chr3	-	3844	3	FSM	ENSMUSG00000028042.16	ENSMUST00000029677.9	3851	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATATTTGTGTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	89300669	89284957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89287302_89287650_89288823_89300341
ENSMUSG00000028044.7_0	chr3	-	830	3	FSM	ENSMUSG00000028044.7	ENSMUST00000029679.4	849	3	9	10	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTTAACGCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	89325681	89322788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89323271_89323580_89323709_89325461
ENSMUSG00000028044.7_5	chr3	-	849	3	FSM	ENSMUSG00000028044.7	ENST00000368439.5	864	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCTTAACGCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	89325605	89322788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89323271_89323580_89323709_89325366
ENSMUSG00000028047.12_0	chr3	+	3177	22	FSM	ENSMUSG00000028047.12	ENST00000541576.5	3188	22	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	89122470	89134142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89122632_89123987_89124195_89124991_89125249_89125334_89125438_89126353_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028047.12_21	chr3	+	3031	21	FSM	ENSMUSG00000028047.12	ENST00000368378.7	3045	21	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGTGCAATTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	89123998	89134142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89124195_89124991_89125249_89125334_89125438_89126327_89126437_89126519_89126572_89126695_89126845_89127161_89127303_89127458_89127537_89128264_89128418_89128640_89128752_89128833_89128942_89130309_89130470_89130711_89130831_89130937_89130991_89131266_89131461_89131592_89131772_89131883_89131933_89132116_89132314_89132558_89132732_89133610_89133751_89133832
ENSMUSG00000028048.12_0	chr3	+	1761	11	FSM	ENSMUSG00000028048.12	ENSMUST00000077367.11	1779	11	10	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGAGTTCGCTCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	89110244	89115978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89110394_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_1	chr3	+	1914	12	FSM	ENSMUSG00000028048.12	ENSMUST00000167998.2	1938	12	15	9	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGTTCGCTCCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	89110261	89115979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89110394_89110498_89110668_89110778_89110849_89111291_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_3	chr3	+	1449	8	FSM	ENSMUSG00000028048.12	ENST00000427500.7	1467	8	10	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACACGGGGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	89111299	89116040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89111484_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114759_89115130_89115295_89115618_89115736_89115823
ENSMUSG00000028048.12_5	chr3	+	1421	9	FSM	ENSMUSG00000028048.12	ENST00000566701.5	1435	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGGAACTGACACCTG	NA	NA	NA	NA	NA	NA	NA	NA	89111308	89115924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89111484_89111581_89111729_89112753_89112888_89113098_89113272_89113440_89113676_89114533_89114770_89115191_89115295_89115618_89115736_89115823
ENSMUSG00000028049.16_0	chr3	+	1458	8	FSM	ENSMUSG00000028049.16	ENST00000355379.3	1472	8	10	4	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCACCCATTTCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	89084730	89090070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89084965_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_3	chr3	+	1470	9	FSM	ENSMUSG00000028049.16	ENSMUST00000029684.15	1489	9	11	8	-6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGAACTCACCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	89084790	89090064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89084965_89085296_89085375_89086401_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028049.16_7	chr3	+	1459	9	FSM	ENSMUSG00000028049.16	ENSMUST00000120697.8	1475	9	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGAACTCACCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	89084804	89090064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89084965_89085296_89085375_89086398_89086531_89086623_89086745_89087558_89087688_89088035_89088196_89088481_89088584_89089232_89089351_89089605
ENSMUSG00000028053.14_0	chr3	+	11629	28	FSM	ENSMUSG00000028053.14	ENSMUST00000186583.7	11644	28	13	2	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGAGTCTTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	88857941	88986680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88858303_88873118_88873636_88888539_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ENSMUSG00000028053.14_3	chr3	+	11261	27	FSM	ENSMUSG00000028053.14	ENSMUST00000090933.5	11268	27	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGGAGTCTTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	88873125	88986680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88873636_88888539_88893098_88909079_88909182_88914448_88915185_88930337_88930518_88933718_88933814_88940565_88940640_88942523_88942570_88942679_88942789_88950425_88950633_88950803_88950951_88959295_88959405_88960049_88960215_88960383_88960479_88961669_88961825_88965794_88965948_88970957_88971013_88971092_88971226_88973478_88973728_88974461_88974549_88976293_88976385_88977534_88977674_88977780_88977954_88979752_88979920_88982031_88982073_88983282_88983585_88984297
ENSMUSG00000028057.15_0	chr3	+	1196	6	FSM	ENSMUSG00000028057.15	ENSMUST00000029692.15	1204	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCTTCAACCTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	88624152	88637034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88624265_88624632_88624778_88624908_88624966_88633301_88633376_88633586_88633779_88636418
ENSMUSG00000028059.17_12	chr3	+	4273	22	FSM	ENSMUSG00000028059.17	ENSMUST00000029694.14	4300	22	17	10	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGCAAGGCTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88528429	88555349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88528629_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_20	chr3	+	4373	22	FSM	ENSMUSG00000028059.17	ENSMUST00000107510.10	4390	22	9	8	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGCAAGGCTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88528607	88555349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_23	chr3	+	4220	22	FSM	ENSMUSG00000028059.17	ENSMUST00000170653.9	4238	22	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTAAAATTGCAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88528747	88555342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88528907_88537093_88537239_88539217_88539286_88539582_88539641_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028059.17_4	chr3	+	4466	23	FSM	ENSMUSG00000028059.17	ENSMUST00000176500.8	4492	23	16	10	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGCAAGGCTGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88523465	88555349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88523764_88523867_88523962_88537093_88537239_88539217_88539286_88539582_88539647_88540219_88540350_88540564_88540675_88540806_88540954_88541716_88541968_88542289_88542416_88542907_88543026_88543161_88543411_88545577_88545655_88546629_88546800_88547589_88547658_88549732_88549934_88550232_88550347_88550455_88550524_88550651_88550688_88550868_88550920_88551096_88551541_88553483_88553668_88554096
ENSMUSG00000028060.15_0	chr3	+	2969	14	FSM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTATTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	88593112	88620222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUSG00000028060.15_15	chr3	+	1109	9	ISM	ENSMUSG00000028060.15	ENST00000368319.3	1158	10	502	3	502	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACTGGACAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88593658	88607805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668
ENSMUSG00000028060.15_16	chr3	+	2888	13	ISM	ENSMUSG00000028060.15	ENSMUST00000029696.11	2981	14	540	9	493	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTATTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	88593649	88620222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607567_88607822_88616086_88616249_88617136_88617250_88618067_88618160_88618936
ENSMUSG00000028060.15_5	chr3	+	1155	10	FSM	ENSMUSG00000028060.15	ENST00000368319.3	1158	10	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACTGGACAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88593156	88607805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88593195_88593650_88593874_88596481_88596611_88596930_88597011_88600382_88600436_88600727_88600892_88603871_88604084_88606155_88606217_88607257_88607316_88607668
ENSMUSG00000028062.16_0	chr3	-	648	4	FSM	ENSMUSG00000028062.16	ENSMUST00000029698.15	668	4	12	8	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTACCTGTGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	88460319	88457133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88457312_88458002_88458093_88459661_88459825_88460102
ENSMUSG00000028062.16_3	chr3	-	363	3	FSM	ENSMUSG00000028062.16	ENST00000368304.9	372	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACGCCATATCGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	88460185	88457194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88457312_88459661_88459825_88460102
ENSMUSG00000028062.16_4	chr3	-	280	2	ISM	ENSMUSG00000028062.16	ENST00000368304.9	372	3	366	4	342	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACGCCATATCGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	88459824	88457194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_88457312_88459661
ENSMUSG00000028063.16_0	chr3	-	3140	12	FSM	ENSMUSG00000028063.16	ENSMUST00000029699.13	3156	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGATGCTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	88410632	88388460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88389408_88389652_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_19	chr3	-	2277	11	FSM	ENSMUSG00000028063.16	ENST00000682650.1	2292	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGTTTTATACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	88410604	88389199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88389408_88389652_88389920_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_21	chr3	-	2610	11	FSM	ENSMUSG00000028063.16	ENST00000675667.1	2622	11	12	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTTCTATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	88410644	88389247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88389920_88390624_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_24	chr3	-	2005	10	FSM	ENSMUSG00000028063.16	ENSMUST00000120377.8	2021	10	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCACTTGCTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88410605	88390518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88410054
ENSMUSG00000028063.16_25	chr3	-	1528	10	FSM	ENSMUSG00000028063.16	ENSMUST00000036252.7	1536	10	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCACTTGCTGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	88400617	88390518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88390721_88391133_88391254_88391353_88391462_88391921_88392145_88392233_88392455_88393510_88393637_88393766_88393938_88394114_88394241_88395581_88395739_88400543
ENSMUSG00000028064.18_1	chr3	-	2801	13	FSM	ENSMUSG00000028064.18	ENST00000355014.6	2827	13	12	14	12	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGATATAAGCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	88360415	88343290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88344560_88345109_88345208_88345485_88345648_88345749_88345869_88348004_88348186_88355297_88355449_88356986_88357160_88357294_88357420_88357817_88357935_88358651_88358758_88358994_88359094_88359326_88359390_88360277
ENSMUSG00000028066.16_0	chr3	-	993	5	FSM	ENSMUSG00000028066.16	ENSMUST00000056370.13	1007	5	10	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTCATCTGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	88317628	88301453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88301878_88303211_88303408_88306441_88306543_88307017_88307124_88317462
ENSMUSG00000028066.16_3	chr3	-	783	3	FSM	ENSMUSG00000028066.16	ENSMUST00000193338.6	795	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTCATCTGTGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	88317625	88301453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88301878_88303211_88303408_88317462
ENSMUSG00000028068.15_0	chr3	+	5749	38	FSM	ENSMUSG00000028068.15	ENSMUST00000071812.11	5756	38	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTAACCCCTGCGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	87989277	88028348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87989400_87991237_87991326_87993456_87993614_87994584_87994663_87996200_87996278_87996967_87997036_87997123_87997238_87997444_87997624_87998042_87998122_87998777_87998942_87999718_87999807_88001890_88002055_88004208_88004367_88005624_88005747_88006163_88006328_88007932_88008024_88008734_88008903_88008984_88009125_88009203_88009375_88011366_88011451_88011607_88011680_88011772_88011843_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ENSMUSG00000028068.15_3	chr3	+	3260	17	FSM	ENSMUSG00000028068.15	ENSMUST00000194440.2	3263	17	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTAACCCCTGCGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88012448	88028348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88012578_88014818_88015028_88015667_88015821_88016113_88016278_88016578_88016804_88017301_88017443_88019610_88019696_88019904_88020138_88020406_88020540_88020653_88020757_88021230_88021358_88022210_88022299_88023210_88023424_88024086_88024254_88024505_88024608_88024982_88025092_88027469
ENSMUSG00000028069.17_0	chr3	+	1620	8	FSM	ENSMUSG00000028069.17	ENSMUST00000029707.13	1630	8	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAATGTCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87950419	87963292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87950487_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUSG00000028069.17_3	chr3	+	1760	9	FSM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	0	8	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAATGTCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87950414	87963292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87950487_87950773_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUSG00000028069.17_6	chr3	+	1686	8	ISM	ENSMUSG00000028069.17	ENSMUST00000166021.8	1768	9	361	8	341	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAATGTCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87950775	87963292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_87950909_87958468_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUSG00000028069.17_7	chr3	+	1548	7	ISM	ENSMUSG00000028069.17	ENSMUST00000193398.2	2210	8	8035	-5	8035	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATGAAATGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	87958469	87963288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_87958597_87958979_87959054_87959151_87959245_87959338_87959426_87961675_87961768_87962009_87962061_87962264
ENSMUSG00000028070.8_0	chr3	-	671	6	FSM	ENSMUSG00000028070.8	ENST00000680661.1	686	6	12	3	1	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGACAGTAGCCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	87965801	87950376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87950398_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028070.8_1	chr3	-	895	6	FSM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGGAGTCTTCTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87965792	87963829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87964084_87964292_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028070.8_6	chr3	-	643	5	ISM	ENSMUSG00000028070.8	ENSMUST00000029708.8	908	6	9	465	9	-465	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGACTCAGGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	87965793	87964291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_87964441_87965030_87965145_87965227_87965339_87965436_87965546_87965633
ENSMUSG00000028072.7_0	chr3	-	2655	16	FSM	ENSMUSG00000028072.7	ENST00000368196.7	2670	16	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGGCTGTGTCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	87702561	87685557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87685907_87686942_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976_87691307_87693274_87693408_87695623_87695767_87695928_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87702239
ENSMUSG00000028072.7_11	chr3	-	2356	16	FSM	ENSMUSG00000028072.7	ENST00000674537.1	2371	16	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGACCCAGCAGGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	87721266	87685635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87685907_87686942_87687102_87687377_87687619_87688737_87688911_87689047_87689179_87689457_87689605_87690031_87690135_87690380_87690437_87690976_87691307_87693274_87693408_87695623_87695767_87695928_87696081_87696923_87696993_87698680_87698753_87698976_87699052_87721165
ENSMUSG00000028073.16_0	chr3	-	4288	23	FSM	ENSMUSG00000028073.16	ENSMUST00000079083.12	4297	23	0	9	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAGTGGCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	87676260	87656412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87657605_87658416_87658663_87658746_87658822_87658956_87659081_87659160_87659250_87659413_87659627_87659778_87659908_87660014_87660144_87661072_87661202_87661370_87661518_87661599_87661703_87661804_87661969_87663211_87663333_87663412_87663588_87663858_87664072_87664155_87664293_87664450_87664572_87665233_87665478_87665631_87665725_87666400_87666502_87666783_87666889_87667530_87667693_87676184
ENSMUSG00000028073.16_4	chr3	-	4268	23	FSM	ENSMUSG00000028073.16	ENSMUST00000090981.13	4314	23	37	9	-14	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAGTGGCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	87731576	87656412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87657605_87658416_87658663_87658746_87658822_87658956_87659081_87659160_87659250_87659413_87659627_87659778_87659908_87660014_87660144_87661072_87661202_87661370_87661518_87661599_87661703_87661804_87661969_87663211_87663333_87663412_87663588_87663858_87664072_87664155_87664293_87664450_87664572_87665233_87665478_87665631_87665725_87666400_87666502_87666783_87666889_87667530_87667703_87731530
ENSMUSG00000028073.16_5	chr3	-	4482	25	FSM	ENSMUSG00000028073.16	ENSMUST00000172621.8	4490	25	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAGTGGCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	87676250	87656412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_87657605_87658416_87658663_87658746_87658822_87658956_87659081_87659160_87659250_87659413_87659627_87659778_87659908_87660014_87660144_87661072_87661202_87661370_87661518_87661599_87661703_87661804_87661969_87663211_87663333_87663412_87663588_87663858_87664072_87664155_87664293_87664450_87664572_87665233_87665478_87665631_87665725_87666400_87666502_87666783_87666889_87667530_87667693_87669518_87669589_87670531_87670666_87676184
ENSMUSG00000028073.16_6	chr3	-	4408	24	ISM	ENSMUSG00000028073.16	ENSMUST00000172621.8	4490	25	5601	0	5601	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGCTGAATCAAAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	87670649	87656404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_87657605_87658416_87658663_87658746_87658822_87658956_87659081_87659160_87659250_87659413_87659627_87659778_87659908_87660014_87660144_87661072_87661202_87661370_87661518_87661599_87661703_87661804_87661969_87663211_87663333_87663412_87663588_87663858_87664072_87664155_87664293_87664450_87664572_87665233_87665478_87665631_87665725_87666400_87666502_87666783_87666889_87667530_87667693_87669518_87669589_87670531
ENSMUSG00000028073.16_8	chr3	-	4216	22	ISM	ENSMUSG00000028073.16	ENSMUST00000172621.8	4490	25	8554	8	8554	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCTGAGTGGCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	87667696	87656412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_87657605_87658416_87658663_87658746_87658822_87658956_87659081_87659160_87659250_87659413_87659627_87659778_87659908_87660014_87660144_87661072_87661202_87661370_87661518_87661599_87661703_87661804_87661969_87663211_87663333_87663412_87663588_87663858_87664072_87664155_87664293_87664450_87664572_87665233_87665478_87665631_87665725_87666400_87666502_87666783_87666889_87667530
ENSMUSG00000028076.13_0	chr3	-	1921	6	FSM	ENSMUSG00000028076.13	ENSMUST00000029717.4	1946	6	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAAATGAAAATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	86906737	86903154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86903909_86903996_86904094_86904644_86904924_86905378_86905658_86905939_86906213_86906498
ENSMUSG00000028078.15_0	chr3	-	3461	16	FSM	ENSMUSG00000028078.15	ENSMUST00000195561.6	3486	16	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATCCATGGGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	86827617	86693465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86694720_86699301_86699419_86700525_86700607_86701123_86701221_86706317_86706396_86706767_86706902_86712890_86713038_86713428_86713549_86720983_86721042_86722396_86722506_86723664_86723738_86731942_86732038_86739039_86739142_86743611_86743715_86813191_86813524_86827056
ENSMUSG00000028080.17_0	chr3	+	9883	57	FSM	ENSMUSG00000028080.17	ENST00000651943.2	9892	57	4	5	-3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAGTGGAAACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	86131983	86689994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_86132062_86132375_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267043_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ENSMUSG00000028080.17_23	chr3	+	9806	56	ISM	ENSMUSG00000028080.17	ENST00000651943.2	9892	57	395	5	388	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGAGTGGAAACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	86132374	86689994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_86132812_86192303_86192536_86192940_86193042_86198733_86198830_86202395_86202518_86202608_86202736_86203552_86203673_86205171_86205319_86211542_86211741_86211906_86212041_86217267_86217377_86217693_86217847_86222642_86222812_86225401_86225482_86226867_86226931_86227811_86227910_86231035_86231129_86232312_86232422_86233007_86233090_86234905_86235030_86235470_86235664_86255425_86256476_86257553_86257733_86258509_86258664_86259135_86259317_86260975_86261104_86261505_86261614_86263893_86264054_86267043_86267489_86275810_86275945_86279384_86279464_86280742_86280877_86283211_86283274_86302527_86302593_86325194_86325304_86352613_86352781_86439391_86439517_86447209_86447357_86449881_86450019_86513176_86513295_86515654_86515758_86522278_86522395_86526816_86526930_86548797_86548939_86549959_86550080_86571744_86571898_86622819_86622988_86644388_86644479_86648711_86648890_86653107_86653171_86658833_86658990_86664688_86664857_86680406_86680509_86683304_86683502_86687418_86687571_86688877
ENSMUSG00000028081.7_0	chr3	-	961	6	FSM	ENSMUSG00000028081.7	ENSMUST00000029722.7	977	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTTTGCTTCTGTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	86049999	86045252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86045418_86045789_86045900_86046346_86046556_86048545_86048734_86049004_86049109_86049814
ENSMUSG00000028082.15_1	chr3	+	7203	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238443.2	7217	21	7	7	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATATTTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85878422	86037826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_85878732_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ENSMUSG00000028082.15_10	chr3	+	6379	15	FSM	ENSMUSG00000028082.15	ENSMUST00000107664.3	6414	15	32	3	-24	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATATTTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85991772	86037826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ENSMUSG00000028082.15_5	chr3	+	6986	21	FSM	ENSMUSG00000028082.15	ENSMUST00000238331.2	7025	21	24	15	24	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTTTTAAAAAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	85946207	86037818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_85946308_85948132_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ENSMUSG00000028082.15_6	chr3	+	7216	20	FSM	ENSMUSG00000028082.15	ENSMUST00000238222.2	7228	20	5	7	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATATTTTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	85947810	86037826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_85948173_85982454_85982496_85987701_85987745_85990533_85990673_85990808_85990963_85991674_85992665_86000996_86001105_86005453_86005567_86010196_86010259_86011389_86011655_86014276_86014346_86014518_86014660_86020412_86020486_86022093_86022225_86024125_86024185_86027836_86028040_86028440_86028494_86030452_86030640_86030992_86031091_86033901
ENSMUSG00000028085.13_0	chr3	+	3459	13	FSM	ENSMUSG00000028085.13	ENSMUST00000127348.8	3469	13	10	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGCAGTGAAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	85481435	85562929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_85481627_85483170_85483322_85509166_85509281_85511687_85511887_85512321_85512445_85518658_85518773_85520769_85520855_85523921_85523967_85526130_85526321_85544230_85544365_85552276_85552356_85559587_85559723_85561030
ENSMUSG00000028086.16_6	chr3	+	618	2	FSM	ENSMUSG00000028086.16	ENST00000604872.6	629	2	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTACCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	84810235	84811382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_84810279_84810807
ENSMUSG00000028086.16_7	chr3	+	568	1	ISM	ENSMUSG00000028086.16	ENST00000603548.6	5217	13	88872	75393	579	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	886	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTACCTTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	84810814	84811382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_84810800_84811400
ENSMUSG00000028089.6_0	chr3	-	2980	23	FSM	ENSMUSG00000028089.6	ENSMUST00000029730.5	3008	23	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTAATGGTTATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	97517497	97468063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97468404_97469894_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488294_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413_97512527_97517378
ENSMUSG00000028089.6_12	chr3	-	1341	10	FSM	ENSMUSG00000028089.6	ENST00000652587.1	1361	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCCTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97491229	97469898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123
ENSMUSG00000028089.6_14	chr3	-	1719	14	FSM	ENSMUSG00000028089.6	ENST00000369259.4	1735	14	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCCTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97497956	97469898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869
ENSMUSG00000028089.6_16	chr3	-	2025	16	FSM	ENSMUSG00000028089.6	ENST00000361293.10	2043	16	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCCTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97501467	97469898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323
ENSMUSG00000028089.6_17	chr3	-	2483	21	FSM	ENSMUSG00000028089.6	ENST00000369258.8	2504	21	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCCTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97512516	97469898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97479876_97480026_97488318_97488494_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413
ENSMUSG00000028089.6_18	chr3	-	2159	19	FSM	ENSMUSG00000028089.6	ENST00000650714.1	2180	19	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTATCCTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97512516	97469898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97470004_97470772_97470888_97474074_97474146_97476416_97476516_97477517_97477721_97478219_97478384_97490032_97490187_97491123_97491239_97494426_97494538_97495555_97495630_97497221_97497319_97497869_97497963_97498520_97498677_97501323_97501487_97505007_97505090_97509337_97509370_97510324_97510440_97510975_97511083_97512413
ENSMUSG00000028093.16_0	chr3	+	1737	10	FSM	ENSMUSG00000028093.16	ENSMUST00000090759.5	1754	10	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGAATGTTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	97066104	97083885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_97066682_97073158_97073288_97073389_97073521_97073855_97073933_97075302_97075391_97075756_97075890_97078957_97079059_97081118_97081215_97082943_97083110_97083646
ENSMUSG00000028096.14_0	chr3	-	4578	14	FSM	ENSMUSG00000028096.14	ENSMUST00000029738.14	4598	14	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGGAAAAAATATACATCT	NA	NA	NA	NA	NA	NA	NA	NA	96812656	96775610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789834_96789945_96797224_96797306_96798118_96798240_96800181_96800284_96800813_96800921_96804648_96804753_96805807_96805868_96812497
ENSMUSG00000028096.14_2	chr3	-	1243	12	FSM	ENSMUSG00000028096.14	ENST00000407924.2	1258	12	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGACTCCCTGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	96804741	96778704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96778911_96779792_96779859_96780775_96780866_96782943_96783040_96787389_96787483_96787936_96788026_96789862_96789945_96797224_96797306_96798118_96798240_96800181_96800303_96800815_96800921_96804648
ENSMUSG00000028098.14_0	chr3	+	2195	9	FSM	ENSMUSG00000028098.14	ENSMUST00000029740.14	2209	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATTAAGCTTCAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	96634988	96698463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96635227_96661650_96661710_96665292_96665351_96682945_96683158_96690963_96691036_96692308_96692382_96693246_96693341_96695885_96696002_96697190
ENSMUSG00000028099.9_0	chr3	-	2377	15	FSM	ENSMUSG00000028099.9	ENSMUST00000029741.9	2390	15	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGGGGTCAGCACGATA	NA	NA	NA	NA	NA	NA	NA	NA	96634935	96618809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96619377_96620796_96620947_96621410_96621461_96621574_96621677_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149_96633316_96634664
ENSMUSG00000028099.9_11	chr3	-	1293	11	FSM	ENSMUSG00000028099.9	ENST00000369294.5	1313	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAAGCAATGCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	96633286	96619291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96619377_96622435_96622587_96622949_96623011_96623744_96623797_96623982_96624064_96626549_96626643_96626776_96626882_96629855_96629942_96630829_96631016_96631112_96631369_96633149
ENSMUSG00000028100.12_1	chr3	-	1403	7	FSM	ENSMUSG00000028100.12	ENST00000334513.6	1417	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCGCCCGACTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	96615811	96612850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96613367_96613657_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615288_96615492_96615643
ENSMUSG00000028100.12_10	chr3	-	1092	8	FSM	ENSMUSG00000028100.12	ENSMUST00000171249.6	1110	8	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAAATGTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96615871	96613395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96613560_96613683_96613845_96614225_96614363_96614517_96614617_96614873_96614967_96615099_96615126_96615307_96615492_96615643
ENSMUSG00000028101.19_0	chr3	+	2840	14	FSM	ENSMUSG00000028101.19	ENSMUST00000107076.10	2858	14	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCTGTGAGCGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	96603710	96613271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96603848_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028101.19_1	chr3	+	2905	14	FSM	ENSMUSG00000028101.19	ENSMUST00000064900.16	2931	14	5	21	5	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTAAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96604403	96613365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96604512_96606735_96607154_96607308_96607394_96607533_96607585_96607804_96607896_96608601_96608737_96608931_96609038_96609489_96609564_96609672_96609834_96610841_96610976_96611054_96611224_96611374_96611509_96611664_96611703_96612164
ENSMUSG00000028102.16_0	chr3	+	2408	4	FSM	ENSMUSG00000028102.16	ENSMUST00000118557.8	2424	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAGTAGCCTCAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96542753	96552674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96543060_96543989_96544106_96544446_96544649_96550890
ENSMUSG00000028102.16_7	chr3	+	1537	4	FSM	ENSMUSG00000028102.16	ENSMUST00000165842.3	1562	4	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTTTTTTATTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	96543171	96552040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96543241_96543989_96544106_96544446_96544649_96550890
ENSMUSG00000028104.15_0	chr3	-	1410	8	FSM	ENSMUSG00000028104.15	ENSMUST00000091924.10	1427	8	15	2	-7	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGTCTAACAGAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	96501482	96485189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488150_96488220_96488959_96489090_96489403_96489572_96501399
ENSMUSG00000028104.15_6	chr3	-	614	6	FSM	ENSMUSG00000028104.15	ENST00000369313.7	633	6	9	10	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACTGAAAAACCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	96489564	96485826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96485905_96487113_96487228_96487331_96487406_96487765_96487823_96488959_96489090_96489403
ENSMUSG00000028106.14_1	chr3	-	7732	11	FSM	ENSMUSG00000028106.14	ENSMUST00000090791.8	7756	11	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTGACATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	95726053	95667659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95673733_95679307_95679509_95681423_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693764_95694595_95694697_95697411_95697542_95725858
ENSMUSG00000028106.14_2	chr3	-	3282	9	FSM	ENSMUSG00000028106.14	ENSMUST00000197449.2	3298	9	11	5	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACTGGAAAGTGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	95726079	95679571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95681685_95683826_95684110_95687726_95687903_95691525_95691653_95692365_95692419_95693631_95693710_95694595_95694697_95697411_95697542_95725858
ENSMUSG00000028107.15_0	chr3	-	2383	18	FSM	ENSMUSG00000028107.15	ENSMUST00000029752.15	2400	18	12	5	3	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGGCTGTGCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	95662171	95647292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95655353_95655453_95655798_95655946_95657650_95657730_95658012_95658078_95658178_95658297_95658817_95658943_95660318_95660443_95661630_95661828_95662069
ENSMUSG00000028107.15_16	chr3	-	1467	12	FSM	ENSMUSG00000028107.15	ENST00000438568.6	1479	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATGTCCATTGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	95661802	95647483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95647632_95648633_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95657650_95657730_95658817_95658898_95661630
ENSMUSG00000028107.15_39	chr3	-	1522	12	FSM	ENSMUSG00000028107.15	ENST00000369054.6	1537	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGTAAGAGGGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	95661803	95648639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95648749_95649385_95649459_95649627_95649730_95649889_95649991_95653096_95653175_95653344_95653483_95653846_95654010_95654750_95654969_95658178_95658297_95658817_95658943_95660318_95660443_95661630
ENSMUSG00000028108.17_0	chr3	-	1890	11	FSM	ENSMUSG00000028108.17	ENSMUST00000117507.10	1901	11	9	2	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTCGTTGTCTTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95646872	95641460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644370_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028108.17_1	chr3	-	1885	11	FSM	ENSMUSG00000028108.17	ENSMUST00000029753.14	1895	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTTGTCTTTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95646869	95641459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95641784_95642134_95642223_95642510_95642732_95643158_95643534_95643783_95644104_95644324_95644367_95644944_95645026_95645119_95645201_95645323_95645429_95645550_95645614_95646684
ENSMUSG00000028109.15_0	chr3	+	1540	11	FSM	ENSMUSG00000028109.15	ENST00000322343.11	1556	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACAACTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95469798	95495183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95469936_95473931_95473996_95474994_95475036_95482816_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028109.15_4	chr3	+	1555	11	FSM	ENSMUSG00000028109.15	ENST00000361824.7	1569	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACAACTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95469796	95495183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95469936_95473931_95473996_95474994_95475032_95482799_95482914_95483587_95483740_95485363_95485618_95487315_95487383_95487468_95487546_95488817_95488902_95492450_95492526_95494691
ENSMUSG00000028111.5_0	chr3	+	831	6	FSM	ENSMUSG00000028111.5	ENST00000679260.1	850	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGAGTGGGCATGGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	95408152	95416300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95408266_95408657_95408781_95408861_95409018_95413872_95414039_95414223_95414330_95416133
ENSMUSG00000028114.17_0	chr3	-	2732	11	FSM	ENSMUSG00000028114.17	ENSMUST00000029759.16	2741	11	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	123179750	123161947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_123163340_123164923_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUSG00000028114.17_2	chr3	-	7176	7	FSM	ENSMUSG00000028114.17	ENSMUST00000090371.14	7197	7	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTTGAATTAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123179569	123161955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUSG00000028114.17_3	chr3	-	4199	10	FSM	ENSMUSG00000028114.17	ENSMUST00000174323.6	4202	10	1	2	1	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTGTTTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	123179633	123161947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_123165135_123166205_123166323_123167618_123167712_123168393_123168536_123169793_123169885_123173868_123173957_123174296_123174378_123176403_123176492_123177244_123177334_123179410
ENSMUSG00000028116.14_0	chr3	-	1163	6	FSM	ENSMUSG00000028116.14	ENSMUST00000029761.14	1181	6	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTTTAAGTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	122828658	122799866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122800267_122807248_122807433_122810197_122810328_122819711_122819882_122827840_122827930_122828468
ENSMUSG00000028121.9_0	chr3	+	3290	12	FSM	ENSMUSG00000028121.9	ENSMUST00000029766.9	3311	12	10	11	10	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTATCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	122213436	122323829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122213833_122220093_122220404_122248701_122248742_122298575_122298705_122301774_122302221_122304867_122304972_122305999_122306653_122312911_122313028_122316817_122316990_122318572_122318685_122318935_122319149_122323230
ENSMUSG00000028124.16_0	chr3	+	5573	7	FSM	ENSMUSG00000028124.16	ENSMUST00000029769.14	5589	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTGCCTGATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	122039213	122064373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122039761_122049193_122049260_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028124.16_3	chr3	+	1779	6	FSM	ENSMUSG00000028124.16	ENST00000615724.1	1794	6	10	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGCTATCTTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	122039318	122060750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122039761_122052855_122052941_122055516_122055577_122056248_122056452_122058442_122058558_122059876
ENSMUSG00000028126.17_0	chr3	-	3597	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107236.9	3618	15	15	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTTTATTAGTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	95014171	94965846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ENSMUSG00000028126.17_13	chr3	-	1762	14	FSM	ENSMUSG00000028126.17	ENST00000441902.6	1777	14	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGGAGAGAATGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	95013867	94967293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ENSMUSG00000028126.17_2	chr3	-	3635	15	FSM	ENSMUSG00000028126.17	ENSMUST00000107233.9	3663	15	23	5	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTATTTTTAAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95014218	94965858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990140_95013686
ENSMUSG00000028126.17_4	chr3	-	3414	14	FSM	ENSMUSG00000028126.17	ENSMUST00000107232.9	3437	14	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGACCTATTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	95014151	94965862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990134_95013686
ENSMUSG00000028126.17_6	chr3	-	3101	14	FSM	ENSMUSG00000028126.17	ENST00000368890.8	3126	14	14	11	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTAAAGTTCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	95013858	94965885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990137_95013686
ENSMUSG00000028126.17_9	chr3	-	3468	15	FSM	ENSMUSG00000028126.17	ENSMUST00000005768.8	3480	15	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTAAAGTTCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	95014084	94965885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94967397_94967794_94967841_94970965_94971096_94971641_94971786_94972731_94972817_94973122_94973172_94974692_94974777_94975371_94975578_94978022_94978323_94979200_94979354_94979713_94979832_94981303_94981435_94985412_94985494_94990101_94990134_95013686
ENSMUSG00000028127.11_0	chr3	-	3146	19	FSM	ENSMUSG00000028127.11	ENSMUST00000197383.5	3156	19	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGGTCTCCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	121608810	121552427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUSG00000028127.11_1	chr3	-	3465	23	FSM	ENSMUSG00000028127.11	ENSMUST00000029770.8	3489	23	14	10	14	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTACAGAACATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	121608937	121552565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_121553959_121555063_121555121_121558649_121558755_121562270_121562391_121562815_121562906_121563000_121563067_121563163_121563242_121565951_121566016_121567637_121567711_121567790_121567883_121569079_121569172_121569265_121569364_121569450_121569521_121570645_121570716_121573203_121573347_121575576_121575634_121577659_121577784_121578121_121578220_121579650_121579721_121585382_121585472_121586452_121586552_121590097_121590135_121608657
ENSMUSG00000028128.14_0	chr3	+	1851	6	FSM	ENSMUSG00000028128.14	ENSMUST00000029771.13	1872	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAGACAATCGCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	121517195	121528686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_121517452_121518625_121518732_121522985_121523204_121525172_121525352_121526029_121526190_121527754
ENSMUSG00000028133.18_0	chr3	-	1449	5	FSM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	23	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAAAAGGACTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	120965321	120949058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416_120952905_120965240
ENSMUSG00000028133.18_1	chr3	-	1372	4	ISM	ENSMUSG00000028133.18	ENSMUST00000106466.10	1484	5	12437	11	12430	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAAGGACTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120952907	120949057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_120949707_120949835_120949952_120950049_120950166_120952416
ENSMUSG00000028133.18_2	chr3	-	1045	3	ISM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	12436	0	12430	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATGATTTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120952907	120949513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_120949952_120950049_120950166_120952416
ENSMUSG00000028133.18_3	chr3	-	1126	4	FSM	ENSMUSG00000028133.18	ENSMUST00000039761.12	1145	4	19	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATGATTTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	120965324	120949513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_120949952_120950049_120950166_120952416_120952905_120965240
ENSMUSG00000028134.12_0	chr3	-	3457	12	FSM	ENSMUSG00000028134.12	ENST00000676292.1	3469	12	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAAGGACTATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	119555427	119512091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351
ENSMUSG00000028134.12_2	chr3	-	3385	11	ISM	ENSMUSG00000028134.12	ENST00000676292.1	3469	12	8662	8	-5162	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGGACTATGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	119546767	119512089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592
ENSMUSG00000028134.12_23	chr3	-	3770	14	FSM	ENSMUSG00000028134.12	ENSMUST00000200097.5	3777	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGCACCAGCTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119577453	119512397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519855_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUSG00000028134.12_26	chr3	-	2722	9	FSM	ENSMUSG00000028134.12	ENST00000675401.1	2746	9	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACCATAAATAAATCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	119541594	119512424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438
ENSMUSG00000028134.12_46	chr3	-	2992	14	FSM	ENSMUSG00000028134.12	ENST00000370198.5	3000	14	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGTTGGGAGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	119576911	119512648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_119514107_119514255_119514334_119514437_119514655_119517742_119517836_119518260_119518295_119519714_119519870_119533963_119534160_119541240_119541352_119541438_119541604_119545512_119545657_119546592_119546766_119555351_119555428_119575152_119575184_119576850
ENSMUSG00000028136.16_0	chr3	-	6231	12	FSM	ENSMUSG00000028136.16	ENSMUST00000029783.16	6261	12	17	13	-14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGATGAAACAATTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94490006	94404863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ENSMUSG00000028136.16_1	chr3	-	3523	12	FSM	ENSMUSG00000028136.16	ENSMUST00000107283.8	3531	12	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCACAAAGTACAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	94489851	94406622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94408579_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94469075_94469308_94489551
ENSMUSG00000028136.16_2	chr3	-	1352	11	FSM	ENSMUSG00000028136.16	ENST00000642376.1	1370	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCCCATGTGAGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	94489980	94409353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94409373_94409476_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028136.16_5	chr3	-	1326	10	ISM	ENSMUSG00000028136.16	ENST00000642376.1	1370	11	20	128	20	-112	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTCTAAAGAGTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	94489972	94409475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_94409537_94410162_94410292_94410765_94410916_94418348_94418439_94426354_94426519_94427494_94427574_94431492_94431598_94436218_94436284_94438503_94438697_94489682
ENSMUSG00000028137.10_0	chr3	+	3409	13	FSM	ENSMUSG00000028137.10	ENST00000290583.9	3427	13	11	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGTTCTTCCACATCAA	NA	NA	NA	NA	NA	NA	NA	NA	94385645	94399670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94386559_94387574_94387658_94392123_94392173_94392579_94392709_94392803_94392884_94393830_94393975_94394100_94394243_94394441_94394592_94395093_94395160_94395445_94395587_94395833_94395978_94396777_94396915_94398439
ENSMUSG00000028138.9_0	chr3	+	1593	9	FSM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTACCAAGTATTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	138148859	138161255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_138148955_138151050_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUSG00000028138.9_12	chr3	+	934	6	FSM	ENSMUSG00000028138.9	ENST00000626055.2	943	6	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGGTGAGTTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	138151055	138160560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_138151153_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428
ENSMUSG00000028138.9_8	chr3	+	1501	8	ISM	ENSMUSG00000028138.9	ENSMUST00000005964.7	1604	9	2194	5	-1	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTACCAAGTATTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	138151047	138161255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_138151153_138152843_138152986_138153612_138153701_138156659_138156880_138157004_138157266_138159502_138159639_138160428_138160568_138160845
ENSMUSG00000028140.14_0	chr3	+	1600	7	FSM	ENSMUSG00000028140.14	ENSMUST00000029786.14	1612	7	12	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAAAAAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	94350643	94356015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94355092
ENSMUSG00000028140.14_3	chr3	+	1623	7	FSM	ENSMUSG00000028140.14	ENSMUST00000196143.2	1657	7	30	4	30	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGTCTGGCTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	94350673	94358433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94350802_94350965_94351123_94351893_94352019_94352207_94352259_94353942_94354045_94354566_94354651_94357457
ENSMUSG00000028141.13_0	chr3	-	865	5	FSM	ENSMUSG00000028141.13	ENST00000321531.10	880	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGCGTTTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94351130	94340700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94350944
ENSMUSG00000028141.13_1	chr3	-	692	4	FSM	ENSMUSG00000028141.13	ENST00000635322.1	704	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGCGTTTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94351133	94340700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94340948_94341770_94341857_94343262_94343433_94350944
ENSMUSG00000028141.13_2	chr3	-	894	5	FSM	ENSMUSG00000028141.13	ENST00000400999.7	911	5	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAAGCGTTTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94343909	94340700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94340948_94341770_94341857_94342277_94342454_94343262_94343433_94343694
ENSMUSG00000028145.10_0	chr3	+	1765	6	FSM	ENSMUSG00000028145.10	ENSMUST00000049822.10	1781	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCATATTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94217403	94239839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94217596_94224696_94224884_94230888_94231049_94231583_94231692_94237068_94237194_94238846
ENSMUSG00000028149.13_0	chr3	-	3650	15	FSM	ENSMUSG00000028149.13	ENSMUST00000098574.9	3669	15	10	9	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACAGTGAGATTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	138780952	138631671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUSG00000028149.13_11	chr3	-	2602	13	FSM	ENSMUSG00000028149.13	ENSMUST00000200396.2	2622	13	19	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAGCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138780890	138646527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUSG00000028149.13_2	chr3	-	3573	15	FSM	ENSMUSG00000028149.13	ENSMUST00000196280.5	3598	15	13	12	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAACTACAGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	138780885	138631678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661220_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138689482_138689630_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUSG00000028149.13_4	chr3	-	3333	13	ISM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	24489	8	24489	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAACTACAGTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	138756342	138631678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241
ENSMUSG00000028149.13_5	chr3	-	3372	14	FSM	ENSMUSG00000028149.13	ENSMUST00000029796.11	3383	14	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATATGAAACTACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	138780831	138631681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_138633474_138647490_138647620_138651423_138651551_138661082_138661223_138661954_138662081_138663170_138663306_138664314_138664447_138664796_138664941_138669585_138669712_138671628_138671758_138721306_138721433_138727573_138727697_138756241_138756350_138780796
ENSMUSG00000028150.15_0	chr3	+	2128	11	FSM	ENSMUSG00000028150.15	ENSMUST00000029795.10	2136	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCTTCTTCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	94280108	94305147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94280239_94282341_94282372_94294427_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ENSMUSG00000028150.15_1	chr3	+	2523	10	FSM	ENSMUSG00000028150.15	ENSMUST00000197040.5	2576	10	43	10	-41	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGGAAAACCCAAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	94284781	94305573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94284911_94294427_94294514_94294766_94294909_94296057_94296565_94296781_94296904_94298380_94298514_94298686_94298795_94298951_94299063_94300337_94300448_94304498
ENSMUSG00000028152.11_0	chr3	+	6636	8	FSM	ENSMUSG00000028152.11	ENSMUST00000029800.9	6653	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATGGCAGTGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	138447965	138613659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_138448422_138574106_138574158_138596495_138596643_138600108_138600280_138602549_138602676_138603873_138603922_138604027_138604145_138608139
ENSMUSG00000028156.13_0	chr3	+	4974	8	FSM	ENSMUSG00000028156.13	ENSMUST00000029803.12	4991	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3948	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCGACCTTGCTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	138231948	138265449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_138232056_138233028_138233076_138252081_138252189_138253419_138253516_138256023_138256088_138256653_138256768_138259342_138259483_138261150
ENSMUSG00000028158.15_0	chr3	-	3943	18	FSM	ENSMUSG00000028158.15	ENSMUST00000029805.13	3963	18	15	5	15	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGCCCCTTTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	137837123	137795619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810550_137810703_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818_137831007_137837000
ENSMUSG00000028158.15_1	chr3	-	2716	17	ISM	ENSMUSG00000028158.15	ENSMUST00000029805.13	3963	18	6144	1097	12	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCAGTGGAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	137830994	137796711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_137796991_137798339_137798511_137800719_137800845_137808847_137809076_137810427_137810550_137810703_137810802_137812862_137813072_137814716_137814930_137817404_137817513_137818220_137818390_137819816_137819975_137820896_137821048_137821762_137821903_137822167_137822285_137824073_137824182_137829493_137829638_137830818
ENSMUSG00000028161.18_0	chr3	+	4737	13	FSM	ENSMUSG00000028161.18	ENSMUST00000070198.14	4758	13	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGCAGTCGATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	136375896	136643479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_136376663_136503486_136503688_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136640789
ENSMUSG00000028161.18_11	chr3	+	1857	12	ISM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	197809	8	197809	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	136574360	136641534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ENSMUSG00000028161.18_5	chr3	+	1956	13	FSM	ENSMUSG00000028161.18	ENST00000507176.5	1974	13	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	136376561	136641534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_136376663_136574362_136574488_136581849_136581962_136583390_136583537_136587161_136587302_136593707_136593786_136596196_136596292_136608863_136608990_136611059_136611135_136627593_136627679_136634282_136634381_136637771_136637802_136640789
ENSMUSG00000028163.18_0	chr3	-	4104	25	FSM	ENSMUSG00000028163.18	ENSMUST00000029812.14	4117	25	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAATCTTGTCTGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	135397300	135290421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135291277_135295087_135295266_135296076_135296250_135296540_135296608_135297314_135297440_135299591_135299695_135299969_135300140_135300625_135300828_135307186_135307302_135309470_135309613_135310817_135311007_135312332_135312423_135313912_135314057_135318174_135318314_135319411_135319504_135319667_135319773_135321032_135321192_135324564_135324729_135332355_135332505_135361260_135361360_135364788_135364827_135368675_135368755_135373513_135373554_135375030_135375101_135396883
ENSMUSG00000028164.16_0	chr3	+	3664	17	FSM	ENSMUSG00000028164.16	ENSMUST00000029814.10	3675	17	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAAGCTGCATTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	135191375	135277158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135191619_135212669_135212765_135216735_135216842_135217563_135217735_135223663_135223788_135228752_135228929_135230277_135230389_135248072_135248225_135250486_135250605_135253310_135253398_135254960_135255129_135256823_135257043_135260520_135260686_135268965_135269111_135272248_135272392_135273224_135273483_135275975
ENSMUSG00000028165.10_0	chr3	-	3348	3	FSM	ENSMUSG00000028165.10	ENSMUST00000029815.8	3361	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGTTTTCTTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	135129674	135112173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135114652_135116771_135116987_135129019
ENSMUSG00000028165.10_2	chr3	-	1334	2	FSM	ENSMUSG00000028165.10	ENSMUST00000120988.2	1363	2	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTGTCTCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135129145	135115778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135116987_135129019
ENSMUSG00000028167.16_0	chr3	+	1156	10	FSM	ENSMUSG00000028167.16	ENSMUST00000120397.8	1172	10	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	134986994	135010184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_134987130_134991275_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUSG00000028167.16_1	chr3	+	1046	10	FSM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	134987031	135010184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_134987130_134991348_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUSG00000028167.16_3	chr3	+	948	9	ISM	ENSMUSG00000028167.16	ENSMUST00000029817.11	1059	10	4327	3	4327	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTAGTTTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	134991348	135010184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_134991429_134994021_134994101_134995315_134995413_134996754_134996864_135000988_135001050_135002580_135002695_135006434_135006494_135007322_135007416_135009928
ENSMUSG00000028173.11_0	chr3	+	3549	12	FSM	ENSMUSG00000028173.11	ENSMUST00000068952.10	3559	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGGAGTGAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	159545318	159641659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886
ENSMUSG00000028173.11_14	chr3	+	2032	13	FSM	ENSMUSG00000028173.11	ENSMUST00000198878.2	2050	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAAAGTATTATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	159545385	159644294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_159545685_159578545_159578819_159602967_159603093_159607018_159607181_159612751_159612889_159615289_159615459_159616934_159617033_159617396_159617461_159619397_159619542_159620572_159620657_159629062_159629217_159639886_159640006_159644090
ENSMUSG00000028175.16_0	chr3	+	3290	12	FSM	ENSMUSG00000028175.16	ENSMUST00000120272.8	3323	12	31	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTTATTTTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	159201100	159235590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159228162_159228994_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028175.16_1	chr3	+	1962	11	FSM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	159201103	159235096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_159201204_159204000_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028175.16_6	chr3	+	1863	10	ISM	ENSMUSG00000028175.16	ENSMUST00000106041.3	1971	11	2905	0	2905	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTTCTTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	159203999	159235096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_159204267_159219811_159219969_159221141_159221264_159221650_159221782_159222539_159222588_159226466_159226608_159229413_159229587_159232167_159232345_159233580_159233767_159234635
ENSMUSG00000028176.14_0	chr3	-	7156	27	FSM	ENSMUSG00000028176.14	ENST00000651989.2	7175	27	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTCACAGCACATCAC	NA	NA	NA	NA	NA	NA	NA	NA	158267384	157788287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157790184_157810064_157810140_157832851_157832945_157840824_157841047_157854216_157854337_157862424_157862566_157865869_157867551_157869528_157869710_157869911_157870024_157876192_157876394_157880739_157880989_157882845_157882971_157885401_157885502_157887177_157887248_157891014_157891131_157892612_157892743_157903753_157903827_157907986_157908132_157915326_157915402_157946085_157946150_157994616_157994674_157997569_157997660_158008973_158009053_158024071_158024190_158058901_158059105_158158328_158158427_158266742
ENSMUSG00000028176.14_7	chr3	-	945	7	FSM	ENSMUSG00000028176.14	ENST00000370958.5	957	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTTTTAGGAACCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	158158420	157968723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157969030_157994616_157994674_157997569_157997660_158008973_158009053_158024071_158024190_158058901_158059105_158158328
ENSMUSG00000028177.14_0	chr3	+	1429	5	FSM	ENSMUSG00000028177.14	ENSMUST00000196971.2	1450	5	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACTAATTTGAGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	157631359	157643983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_157631884_157632425_157632663_157633999_157634088_157642572_157642711_157643541
ENSMUSG00000028179.13_0	chr3	-	1798	12	FSM	ENSMUSG00000028179.13	ENSMUST00000118539.2	1815	12	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAATGTACCTGGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	157630707	157599894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157600465_157602828_157602968_157610781_157610835_157611819_157611942_157612956_157613110_157614535_157614614_157616519_157616578_157619236_157619369_157624062_157624173_157625653_157625750_157626591_157626674_157630502
ENSMUSG00000028180.19_1	chr3	+	2903	10	FSM	ENSMUSG00000028180.19	ENSMUST00000106058.8	2924	10	9	12	9	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCATAATAGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	157239805	157254035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_11	chr3	+	2512	9	NIC	ENSMUSG00000028180.19	novel	2540	10	NA	NA	-9	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACTATCAAGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	157240015	157253969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr3_+_157240112_157241970_157242018_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157252311
ENSMUSG00000028180.19_16	chr3	+	2710	11	FSM	ENSMUSG00000028180.19	ENSMUST00000106057.8	2737	11	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGAAAGTTGTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	157240038	157254000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_157240112_157241970_157242024_157242114_157242224_157243223_157243307_157246269_157246347_157246691_157246827_157247336_157247507_157248794_157248882_157250600_157250760_157251711_157251787_157252311
ENSMUSG00000028182.15_0	chr3	+	2636	8	FSM	ENSMUSG00000028182.15	ENSMUST00000029833.13	2652	8	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGGAACAGAACATTCT	NA	NA	NA	NA	NA	NA	NA	NA	154799074	154899905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_154799308_154804341_154804591_154806601_154806926_154820047_154820182_154834973_154835137_154869546_154869677_154893300_154894028_154899229
ENSMUSG00000028182.15_2	chr3	+	1700	7	FSM	ENSMUSG00000028182.15	ENSMUST00000192383.6	1717	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAACTATGTGATCCA	NA	NA	NA	NA	NA	NA	NA	NA	154799186	154887860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_154799308_154804341_154804591_154806601_154806926_154820047_154820182_154834973_154835137_154869546_154869677_154887281
ENSMUSG00000028184.13_15	chr3	-	4618	21	ISM	ENSMUSG00000028184.13	ENST00000627151.2	5830	22	35828	1088	8	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAAAAAGAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	148660363	148522579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198
ENSMUSG00000028184.13_18	chr3	-	5768	21	FSM	ENSMUSG00000028184.13	ENST00000674168.1	5782	21	12	2	-6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAATGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	148696197	148521520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ENSMUSG00000028184.13_36	chr3	-	4665	22	FSM	ENSMUSG00000028184.13	ENST00000370727.5	4669	22	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAAAAAGAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	148723641	148522579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148723602
ENSMUSG00000028184.13_37	chr3	-	4740	22	ISM	ENSMUSG00000028184.13	ENST00000370725.5	4798	23	63285	4	15	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAAAAAGAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	148660356	148522579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_148523565_148526915_148527045_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198
ENSMUSG00000028184.13_5	chr3	-	5819	22	FSM	ENSMUSG00000028184.13	ENST00000627151.2	5830	22	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTAACGTGCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	148696184	148521495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_148523565_148528590_148528688_148529331_148529461_148532000_148532170_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ENSMUSG00000028184.13_69	chr3	-	4234	23	FSM	ENSMUSG00000028184.13	ENST00000674489.1	4250	23	11	5	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATATAATATATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	148696198	148526601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_148527045_148528590_148528688_148529331_148529461_148532000_148532170_148532847_148532875_148533176_148533222_148534112_148534205_148539497_148539565_148540939_148541161_148541987_148542198_148543199_148543374_148544744_148544951_148545280_148545407_148552484_148552669_148555401_148555441_148556471_148556658_148557530_148557635_148558202_148558497_148564368_148565170_148571235_148571346_148596047_148596262_148660198_148660372_148696075
ENSMUSG00000028187.11_0	chr3	-	1652	9	FSM	ENSMUSG00000028187.11	ENSMUST00000029838.11	1661	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCTGTGTGAGCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	146227175	146211710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146212331_146212826_146212954_146213268_146213451_146213896_146213980_146217896_146218051_146218570_146218667_146223480_146223562_146225141_146225199_146226923
ENSMUSG00000028188.14_0	chr3	-	1912	15	FSM	ENSMUSG00000028188.14	ENSMUST00000029839.11	1920	15	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGGACTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	146205503	146162960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146163260_146168939_146169011_146171663_146171752_146173860_146173960_146175379_146175559_146181010_146181137_146181948_146182058_146186882_146186965_146187521_146187616_146192954_146193175_146193266_146193321_146194401_146194520_146195565_146195673_146199426_146199599_146205409
ENSMUSG00000028188.14_2	chr3	-	1820	14	ISM	ENSMUSG00000028188.14	ENSMUST00000029839.11	1920	15	5908	3	0	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACATTGGACTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	146199600	146162960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_146163260_146168939_146169011_146171663_146171752_146173860_146173960_146175379_146175559_146181010_146181137_146181948_146182058_146186882_146186965_146187521_146187616_146192954_146193175_146193266_146193321_146194401_146194520_146195565_146195673_146199426
ENSMUSG00000028188.14_4	chr3	-	2660	5	FSM	ENSMUSG00000028188.14	ENSMUST00000093951.3	2712	5	19	33	19	-33	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	146200851	146191198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146193321_146194401_146194520_146195565_146195673_146199426_146199599_146200710
ENSMUSG00000028189.13_0	chr3	+	2863	7	FSM	ENSMUSG00000028189.13	ENSMUST00000061937.13	2892	7	15	14	-8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTACCAAGAAACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	146156239	146171590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146165433_146165596_146169653
ENSMUSG00000028189.13_4	chr3	+	2601	6	FSM	ENSMUSG00000028189.13	ENSMUST00000029840.4	2629	6	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACAAAAGGTAAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	146156264	146171515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146156386_146160101_146160241_146160702_146160912_146163090_146163263_146164497_146164596_146169653
ENSMUSG00000028191.12_0	chr3	+	1937	3	FSM	ENSMUSG00000028191.12	ENSMUST00000029842.9	1949	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAATATTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	145630028	145640111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145630271_145636160_145636450_145638705
ENSMUSG00000028191.12_1	chr3	+	686	3	FSM	ENSMUSG00000028191.12	ENST00000620248.2	697	3	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATACATCACCGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	145630191	145639056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145630271_145636160_145636450_145638738
ENSMUSG00000028194.16_0	chr3	+	3750	6	FSM	ENSMUSG00000028194.16	ENSMUST00000029845.15	3764	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGCCCAGTAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	145464437	145600026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145464920_145551459_145551560_145558005_145558080_145558911_145559032_145594838_145594983_145597196
ENSMUSG00000028195.5_0	chr3	-	1986	6	FSM	ENSMUSG00000028195.5	ENST00000451137.7	2001	6	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAACCCATCCAGGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	145355725	145352702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_145353208_145353257_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
ENSMUSG00000028195.5_5	chr3	-	2004	5	FSM	ENSMUSG00000028195.5	ENSMUST00000029846.5	2019	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAATATCTGAATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	145355727	145352736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_145353724_145353951_145354167_145354287_145354633_145354976_145355191_145355484
ENSMUSG00000028199.19_0	chr3	+	2482	9	FSM	ENSMUSG00000028199.19	ENSMUST00000192462.6	2505	9	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACTGAAGCCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	154302361	154328808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_154302922_154310528_154310653_154312015_154312169_154317046_154317211_154319458_154319511_154324096_154324247_154327117_154327226_154327315_154327412_154327733
ENSMUSG00000028207.19_0	chr4	-	6614	23	FSM	ENSMUSG00000028207.19	ENSMUST00000108340.9	6646	23	18	14	18	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGCAAAAAACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	9669144	9449092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUSG00000028207.19_1	chr4	-	6672	24	FSM	ENSMUSG00000028207.19	ENSMUST00000078139.13	6694	24	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGCAAAAAACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	9669154	9449092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_9453446_9474897_9475032_9475389_9475482_9484471_9484608_9508626_9508765_9514588_9514679_9517635_9517735_9529885_9530023_9531914_9532066_9537678_9537766_9542224_9542311_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUSG00000028207.19_22	chr4	-	2819	13	FSM	ENSMUSG00000028207.19	ENSMUST00000108337.8	2836	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCTCTAGATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	9669152	9575273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUSG00000028207.19_24	chr4	-	2870	14	FSM	ENSMUSG00000028207.19	ENSMUST00000084915.11	2884	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTCTCTAGATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	9669155	9575273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_9576974_9583811_9583857_9594662_9594699_9595376_9595416_9598268_9598302_9598732_9598781_9601306_9601364_9602468_9602502_9604515_9604630_9607796_9607872_9610842_9610939_9635900_9635970_9639197_9639348_9668780
ENSMUSG00000028207.19_50	chr4	-	295	4	FSM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGCAAGTACTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9643570	9635905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_9635970_9637658_9637704_9639197_9639348_9643534
ENSMUSG00000028207.19_51	chr4	-	250	3	ISM	ENSMUSG00000028207.19	ENST00000389204.8	300	4	4232	5	4232	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGCAAGTACTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	9639338	9635905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_9635970_9637658_9637704_9639197
ENSMUSG00000028211.12_0	chr4	+	5382	4	FSM	ENSMUSG00000028211.12	ENSMUST00000029865.4	5404	4	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAACATGTGGAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	11156445	11174372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11156548_11164310_11164570_11165089_11165448_11169709
ENSMUSG00000028212.17_0	chr4	+	3002	12	FSM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTATATAAGATGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11191725	11204775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11191816_11192680_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_2	chr4	+	2886	12	FSM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	10	12	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAAAAACTACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11191739	11204670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11191816_11192680_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_5	chr4	+	2905	11	ISM	ENSMUSG00000028212.17	ENSMUST00000029866.16	3006	12	959	7	955	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTGTATATAAGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	11192684	11204772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_11192718_11192817_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028212.17_6	chr4	+	2807	11	ISM	ENSMUSG00000028212.17	ENSMUST00000108324.4	2908	12	949	17	949	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCAAATTAAAAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	11192678	11204665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_11192718_11192814_11192912_11192992_11193047_11193925_11194078_11195019_11195156_11197152_11197300_11198728_11198825_11199296_11199432_11201304_11201417_11202189_11202348_11202984
ENSMUSG00000028214.14_0	chr4	+	1992	5	FSM	ENSMUSG00000028214.14	ENSMUST00000108304.9	2006	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAAGCATTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	11704461	11714743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11704567_11705904_11706242_11711138_11711216_11711969_11712175_11713475
ENSMUSG00000028214.14_1	chr4	+	1959	4	FSM	ENSMUSG00000028214.14	ENSMUST00000029868.7	1994	4	26	9	26	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAAAGCATTCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	11705832	11714743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11706242_11711138_11711216_11711969_11712175_11713475
ENSMUSG00000028218.20_0	chr4	-	1616	8	NIC	ENSMUSG00000028218.20	novel	1639	9	NA	NA	-9	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCATCATCTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	12172004	12153414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983_12171219_12171697
ENSMUSG00000028218.20_7	chr4	-	797	7	FSM	ENSMUSG00000028218.20	ENST00000620645.1	821	7	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGAAGATGAAAACTAATT	NA	NA	NA	NA	NA	NA	NA	NA	12171204	12153912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_12153979_12155648_12155769_12157650_12157765_12164087_12164193_12168222_12168325_12168964_12169034_12170983
ENSMUSG00000028221.4_0	chr4	+	2325	7	FSM	ENSMUSG00000028221.4	ENSMUST00000029875.4	2339	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACCTCAAAGAGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	14864084	14915171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_14864438_14886533_14886683_14892392_14892500_14893500_14893625_14902486_14902540_14912431_14912523_14913723
ENSMUSG00000028223.9_1	chr4	-	2937	10	FSM	ENSMUSG00000028223.9	ENSMUST00000029877.9	2959	10	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAATCTTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	15945492	15917246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_15919095_15919193_15919257_15919831_15919979_15922484_15922558_15924253_15924354_15929726_15929875_15930913_15931001_15931124_15931183_15932892_15933096_15945282
ENSMUSG00000028224.15_0	chr4	+	2506	16	FSM	ENSMUSG00000028224.15	ENSMUST00000029879.15	2533	16	15	12	15	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAACTCTATTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15957939	15992577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_15958111_15962310_15962445_15963771_15963921_15964246_15964407_15965133_15965238_15969340_15969459_15970720_15970915_15971765_15971864_15976034_15976165_15979140_15979414_15981306_15981749_15983953_15984023_15986508_15986665_15989001_15989116_15991181_15991232_15992433
ENSMUSG00000028226.16_0	chr4	+	5000	10	FSM	ENSMUSG00000028226.16	ENSMUST00000029881.10	5011	10	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATCAAAAAGAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	17853466	18119143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_17853853_17987571_17987721_17996193_17996317_18011490_18011796_18051721_18051884_18054366_18054579_18093329_18093469_18110427_18110579_18111998_18112115_18115886
ENSMUSG00000028228.6_0	chr4	-	5628	16	FSM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACATAGCTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	19570092	19519257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361_19555502_19570000
ENSMUSG00000028228.6_1	chr4	-	5536	15	ISM	ENSMUSG00000028228.6	ENSMUST00000029885.5	5648	16	14607	4	14607	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACATAGCTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	19555501	19519257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_19523295_19525002_19525240_19526283_19526418_19528059_19528112_19528187_19528243_19532398_19532533_19533054_19533115_19535211_19535299_19536526_19536626_19540740_19540831_19543253_19543338_19550587_19550660_19552243_19552319_19553717_19553898_19555361
ENSMUSG00000028229.12_0	chr4	+	1727	10	FSM	ENSMUSG00000028229.12	ENSMUST00000029888.4	1734	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGGATTTAAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	19575213	19606932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_19575328_19580389_19580508_19586775_19586864_19588525_19588686_19595069_19595160_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_3	chr4	+	727	8	FSM	ENSMUSG00000028229.12	ENST00000430676.6	742	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGGCAACAACATACCTA	NA	NA	NA	NA	NA	NA	NA	NA	19580397	19606144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605402_19605537_19606084
ENSMUSG00000028229.12_6	chr4	+	689	8	FSM	ENSMUSG00000028229.12	ENST00000519966.5	703	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGGCAACAACATACCTA	NA	NA	NA	NA	NA	NA	NA	NA	19580396	19606144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_19580508_19586775_19586864_19588525_19588686_19599613_19599670_19601355_19601444_19602642_19602674_19605441_19605537_19606084
ENSMUSG00000028232.14_0	chr4	-	2662	8	FSM	ENSMUSG00000028232.14	ENSMUST00000029891.12	2690	8	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATGAACAAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	3574833	3549048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3550580_3551751_3551892_3554353_3554415_3560498_3560693_3564092_3564258_3569363_3569753_3570320_3570373_3574703
ENSMUSG00000028232.14_1	chr4	-	443	4	FSM	ENSMUSG00000028232.14	ENST00000523073.5	468	4	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGATACCGGGGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	3564243	3550542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3550580_3554353_3554415_3560498_3560693_3564092
ENSMUSG00000028233.7_0	chr4	+	4318	13	FSM	ENSMUSG00000028233.7	ENSMUST00000052712.6	4327	13	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAATTTTGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	3574880	3616616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3575130_3583424_3583490_3585030_3585189_3585451_3586266_3589146_3589265_3591227_3591315_3593459_3593638_3595356_3595658_3598513_3598664_3602146_3602291_3604698_3604916_3605822_3605902_3614858
ENSMUSG00000028234.7_0	chr4	-	3681	4	FSM	ENSMUSG00000028234.7	ENSMUST00000138502.2	3706	4	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	8127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTAAAAATATAAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	3835655	3831348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483
ENSMUSG00000028234.7_11	chr4	-	346	3	FSM	ENSMUSG00000028234.7	ENST00000519606.5	356	3	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAACTGAATAAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	3835548	3834502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3834684_3835191_3835292_3835483
ENSMUSG00000028234.7_5	chr4	-	522	5	FSM	ENSMUSG00000028234.7	ENST00000488192.1	538	5	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAACTGAATAAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	3855755	3834502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3834684_3834935_3835010_3835191_3835292_3835483_3835559_3855663
ENSMUSG00000028234.7_7	chr4	-	600	2	FSM	ENSMUSG00000028234.7	ENST00000523936.5	617	2	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAACTGAATAAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	3835284	3834502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3835010_3835191
ENSMUSG00000028238.7_0	chr4	-	2536	8	FSM	ENSMUSG00000028238.7	ENSMUST00000029900.6	2539	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTTTAGAGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	19922605	19876843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_19878381_19880004_19880080_19881275_19881453_19887307_19887386_19888743_19888824_19890677_19890857_19910586_19910759_19922367
ENSMUSG00000028243.6_0	chr4	+	6619	8	FSM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	16	7	16	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCTTTCGTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	6191113	6221681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_6191214_6196410_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUSG00000028243.6_6	chr4	+	6521	7	ISM	ENSMUSG00000028243.6	ENSMUST00000029907.6	6642	8	5311	7	5311	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTCCTTTCGTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	6196408	6221681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_6196515_6202291_6202443_6203776_6203861_6204563_6204674_6208805_6208944_6214638_6214801_6215911
ENSMUSG00000028245.16_0	chr4	-	3489	31	FSM	ENSMUSG00000028245.16	ENSMUST00000029910.12	3507	31	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAGCACTCTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	6454260	6396213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_6396818_6398318_6398429_6398544_6398648_6398808_6398960_6406786_6406871_6408557_6408682_6409089_6409158_6409843_6409912_6413567_6413627_6414963_6415073_6416499_6416664_6417164_6417208_6417745_6417878_6418260_6418382_6418471_6418524_6419863_6419928_6420049_6420141_6421056_6421137_6423321_6423499_6424878_6424988_6426401_6426474_6428391_6428522_6432679_6432733_6432829_6432878_6433262_6433335_6435056_6435108_6437741_6437779_6437853_6437922_6438042_6438122_6440899_6440990_6453984
ENSMUSG00000028246.14_0	chr4	+	2625	6	FSM	ENSMUSG00000028246.14	ENSMUST00000029908.8	2627	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTGAGATGCGTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21931330	21994749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21931830_21936632_21936769_21948691_21948889_21958443_21958668_21982385_21982503_21993297
ENSMUSG00000028247.3_0	chr4	+	2636	7	FSM	ENSMUSG00000028247.3	ENSMUST00000029909.3	2651	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGCCTTGGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	21879684	21912159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21879797_21892808_21892936_21896554_21896708_21899057_21899158_21900263_21900507_21908482_21908643_21910418
ENSMUSG00000028247.3_7	chr4	+	391	3	FSM	ENSMUSG00000028247.3	ENST00000369240.5	404	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAACACCTCCGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	21899097	21910589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21899158_21908482_21908643_21910418
ENSMUSG00000028247.3_8	chr4	+	326	2	ISM	ENSMUSG00000028247.3	ENST00000369240.5	404	3	9396	7	9396	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAACACCTCCGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	21908487	21910589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_21908643_21910418
ENSMUSG00000028248.16_0	chr4	+	4519	12	FSM	ENSMUSG00000028248.16	ENSMUST00000029911.12	4545	12	14	12	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAAATTCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	21847596	21876463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21848140_21854346_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585_21874673_21874912
ENSMUSG00000028248.16_19	chr4	+	4702	11	FSM	ENSMUSG00000028248.16	ENST00000481229.2	4713	11	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACACTTTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21848069	21876800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21848140_21854262_21854446_21857184_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_33	chr4	+	4633	10	ISM	ENSMUSG00000028248.16	ENST00000481229.2	4713	11	6198	5	6198	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACACTTTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21854261	21876800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_21854446_21857184_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028248.16_9	chr4	+	4722	11	FSM	ENSMUSG00000028248.16	ENST00000369239.10	4734	11	7	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACACTTTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21848054	21876800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21848140_21854262_21854446_21857179_21857369_21859083_21859308_21860819_21860992_21861986_21862178_21865876_21866015_21869515_21869616_21870351_21870406_21871437_21871609_21873585
ENSMUSG00000028249.16_0	chr4	+	2733	9	FSM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACAGTAACAGACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	6365657	6396280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_1	chr4	+	2068	9	FSM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTGAAATTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	6365680	6395641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_6365760_6377076_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_14	chr4	+	2633	8	ISM	ENSMUSG00000028249.16	ENSMUST00000029912.11	2745	9	11425	4	-9	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACAGTAACAGACTTAA	NA	NA	NA	NA	NA	NA	NA	NA	6377074	6396280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_6377143_6378965_6379048_6380989_6381100_6385025_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_15	chr4	+	1991	8	ISM	ENSMUSG00000028249.16	ENSMUST00000103008.12	2086	9	11398	14	-9	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATGTGAAATTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	6377074	6395641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_6377143_6378965_6379048_6380989_6381100_6385028_6385188_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028249.16_17	chr4	+	738	7	FSM	ENSMUSG00000028249.16	ENST00000447267.4	747	7	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTAAACCCTTGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	6377083	6394556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_6377143_6378965_6379048_6380989_6381100_6386532_6386709_6392945_6393118_6393636_6393729_6394509
ENSMUSG00000028251.6_0	chr4	-	1573	4	FSM	ENSMUSG00000028251.6	ENSMUST00000029915.6	1588	4	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGCATGTATTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	21767198	21757382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_21758476_21759369_21759530_21759622_21759794_21767049
ENSMUSG00000028252.21_1	chr4	+	986	12	FSM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATATTGGGAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	21727644	21748296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21727706_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_20	chr4	+	924	11	ISM	ENSMUSG00000028252.21	ENST00000523799.5	987	12	2754	0	2590	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATATTGGGAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	21730397	21748296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_5	chr4	+	3302	12	FSM	ENSMUSG00000028252.21	ENSMUST00000102997.8	3365	12	48	15	19	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATTAAAATTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21727773	21750531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028252.21_6	chr4	+	1374	12	FSM	ENSMUSG00000028252.21	ENSMUST00000108240.3	1406	12	11	21	11	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATAAAAACATAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	21727765	21747941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743246_21743315_21746349_21746430_21746655_21746775_21747482
ENSMUSG00000028252.21_8	chr4	+	1941	12	FSM	ENSMUSG00000028252.21	ENST00000369220.8	1957	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATTATTGTGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21727816	21749216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21727916_21730396_21730504_21732217_21732303_21732488_21732559_21735416_21735469_21740591_21740648_21741954_21741991_21742612_21742705_21743249_21743315_21746349_21746430_21746655_21746775_21748136
ENSMUSG00000028256.17_1	chr3	+	2408	16	FSM	ENSMUSG00000028256.17	ENSMUST00000106192.9	2425	16	13	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAGCAAGTGTCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	144824362	144859672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_144824544_144829971_144830137_144831853_144831987_144832783_144832913_144833591_144833652_144833770_144833843_144834650_144834768_144838392_144838579_144841385_144841496_144842348_144842485_144845544_144845656_144850072_144850178_144854291_144854378_144854675_144854839_144856720_144856847_144859144
ENSMUSG00000028256.17_9	chr3	+	1042	8	FSM	ENSMUSG00000028256.17	ENST00000317336.11	1064	8	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATGAACACTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	144841393	144856832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_144841496_144842348_144842500_144845491_144845656_144850072_144850178_144852523_144852683_144854291_144854378_144854675_144854839_144856720
ENSMUSG00000028261.14_0	chr4	+	3615	3	FSM	ENSMUSG00000028261.14	ENSMUST00000029925.10	3632	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTAGATCTGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	24898093	24904995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_24898303_24898572_24898677_24901693
ENSMUSG00000028266.18_0	chr3	-	1637	5	FSM	ENSMUSG00000028266.18	ENSMUST00000120539.8	1669	5	15	17	15	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATATTCAACAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	143910966	143894307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143910580
ENSMUSG00000028266.18_1	chr3	-	1366	5	FSM	ENSMUSG00000028266.18	ENSMUST00000121796.8	1417	5	29	22	29	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAATATTCAACA	NA	NA	NA	NA	NA	NA	NA	NA	143908128	143894312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573_143907813_143908008
ENSMUSG00000028266.18_2	chr3	-	1410	4	FSM	ENSMUSG00000028266.18	ENSMUST00000121112.6	1447	4	37	0	37	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAATGAAGAAAAAAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	143908056	143894392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_143895067_143899656_143899813_143900167_143900265_143907573
ENSMUSG00000028271.10_0	chr3	+	1430	7	FSM	ENSMUSG00000028271.10	ENSMUST00000029938.10	1455	7	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTAAAACCAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	142470813	142489350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_142471050_142477146_142477254_142483951_142484086_142485452_142485600_142485730_142485861_142487100_142487383_142488956
ENSMUSG00000028273.16_0	chr3	-	5002	13	FSM	ENSMUSG00000028273.16	ENSMUST00000029941.16	5016	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCGACAGCACGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	142101447	141945357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_141948531_141950656_141950773_141953055_141953177_141955090_141955272_141964890_141965054_141983577_141983763_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUSG00000028273.16_12	chr3	-	1189	8	FSM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAGAACAATTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	142101379	142008988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473_142097612_142101346
ENSMUSG00000028273.16_13	chr3	-	1148	7	ISM	ENSMUSG00000028273.16	ENSMUST00000196908.5	1196	8	3776	7	4	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAGAACAATTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	142097603	142008988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_142009183_142009703_142009741_142010057_142010231_142017883_142018303_142020166_142020210_142058494_142058647_142097473
ENSMUSG00000028273.16_4	chr3	-	1737	5	FSM	ENSMUSG00000028273.16	ENST00000318007.9	1751	5	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGTTATCCAGTAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	142097594	142008020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142058402_142058647_142097473
ENSMUSG00000028273.16_9	chr3	-	1742	8	FSM	ENSMUSG00000028273.16	ENSMUST00000168967.9	1755	8	12	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTGCTCTATACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	142097599	142008081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_142009183_142009703_142009741_142010057_142010231_142010465_142010484_142017883_142017976_142020166_142020210_142058494_142058647_142097473
ENSMUSG00000028274.18_0	chr4	+	4137	16	FSM	ENSMUSG00000028274.18	ENSMUST00000108153.9	4157	16	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACACACCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33310320	33502604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33310525_33320518_33320629_33324873_33324978_33325058_33325148_33329519_33329596_33330841_33331083_33337862_33337973_33338990_33339093_33356060_33356197_33362879_33362952_33368572_33368738_33379368_33379438_33404152_33404254_33443600_33443668_33498950_33499075_33500237
ENSMUSG00000028277.14_0	chr4	+	3504	8	FSM	ENSMUSG00000028277.14	ENSMUST00000124992.8	3530	8	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1379	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAAACTAAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	33031427	33052349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33031617_33036708_33036783_33038198_33038331_33040732_33040818_33041355_33041462_33043856_33043987_33045079_33045200_33049681
ENSMUSG00000028278.15_0	chr4	+	4969	7	FSM	ENSMUSG00000028278.15	ENSMUST00000098190.10	5008	7	24	15	24	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTTTAAAAATAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	32983060	33022165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32983608_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ENSMUSG00000028278.15_1	chr4	+	5015	8	FSM	ENSMUSG00000028278.15	ENSMUST00000029946.14	5055	8	23	17	23	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTTTTAAAAATAACCT	NA	NA	NA	NA	NA	NA	NA	NA	32983177	33022163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32983608_32995031_32995197_32995801_32996098_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ENSMUSG00000028278.15_2	chr4	+	4284	6	FSM	ENSMUSG00000028278.15	ENSMUST00000084747.6	4295	6	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAACCTCTTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32983456	33022172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32983608_33004150_33004351_33005133_33005249_33007069_33007213_33012903_33013053_33018646
ENSMUSG00000028280.10_0	chr4	+	1898	9	FSM	ENSMUSG00000028280.10	ENST00000435811.5	1919	9	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAGCACAGAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33132376	33163110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33132776_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028280.10_1	chr4	+	1693	10	FSM	ENSMUSG00000028280.10	ENST00000454853.7	1715	10	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAGCACAGAGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	33132632	33163110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33132776_33146939_33146991_33148920_33149028_33151368_33151437_33152412_33152637_33157059_33157143_33158036_33158178_33160116_33160270_33161629_33161827_33162584
ENSMUSG00000028282.13_0	chr4	+	6556	11	FSM	ENSMUSG00000028282.13	ENSMUST00000178925.8	6557	11	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32615472	32653264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32615493_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUSG00000028282.13_1	chr4	+	6782	11	FSM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32615493	32653264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32615740_32624083_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUSG00000028282.13_2	chr4	+	6527	10	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	8615	1	9	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32624092	32653264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_32624167_32630177_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUSG00000028282.13_4	chr4	+	6454	9	ISM	ENSMUSG00000028282.13	ENSMUST00000029950.10	6799	11	14699	1	6093	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATTAGTATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	32630176	32653264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_32630247_32631065_32631167_32631805_32631881_32634767_32634884_32639363_32641559_32643539_32646661_32648026_32648127_32649172_32649258_32652673
ENSMUSG00000028284.14_0	chr4	+	5750	17	FSM	ENSMUSG00000028284.14	ENSMUST00000037607.11	5773	17	15	8	-8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAGTGTACAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31964111	32023459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_31994873_31994955_32002088_32002154_32010315_32010422_32015938_32016001_32017036_32017153_32019500
ENSMUSG00000028284.14_1	chr4	+	5387	15	FSM	ENSMUSG00000028284.14	ENSMUST00000108183.8	5416	15	21	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCAAAGTGTACAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31964277	32023459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_31964383_31974822_31974934_31977323_31977390_31978430_31978477_31979735_31979875_31981457_31981583_31985685_31985815_31988588_31988720_31989933_31990016_31991712_31991844_31992386_31992517_32002088_32002154_32010315_32010422_32015938_32016001_32019500
ENSMUSG00000028289.13_0	chr4	+	6728	17	FSM	ENSMUSG00000028289.13	ENSMUST00000029964.12	6746	17	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGACAATGTAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28813140	28967491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_28813481_28817444_28817510_28820998_28821669_28870556_28870713_28871660_28871997_28935703_28935829_28938595_28938780_28942585_28942695_28943322_28943379_28947527_28947654_28948597_28948784_28949328_28949391_28950358_28950569_28951262_28951413_28961288_28961483_28962409_28962566_28963888
ENSMUSG00000028291.8_0	chr4	+	1384	5	FSM	ENSMUSG00000028291.8	ENSMUST00000084299.6	1397	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTATTCTGCCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34550942	34566901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_34551274_34562311_34562456_34565127_34565278_34565933_34566006_34566214
ENSMUSG00000028292.15_1	chr4	+	1863	20	FSM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34614957	34660163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_34615027_34618553_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUSG00000028292.15_14	chr4	+	1789	19	ISM	ENSMUSG00000028292.15	ENSMUST00000029968.14	1868	20	3602	4	3602	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTGTGTAGTAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34618558	34660163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_34618628_34623410_34623514_34625400_34625485_34630472_34630571_34633657_34633714_34636951_34637036_34639244_34639322_34645696_34645856_34646507_34646615_34647785_34647882_34650190_34650252_34652131_34652209_34654809_34654935_34656005_34656074_34656152_34656263_34656767_34656864_34657166_34657242_34659490_34659555_34659983
ENSMUSG00000028293.15_0	chr4	-	2023	8	FSM	ENSMUSG00000028293.15	ENSMUST00000029970.14	2039	8	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTTTGTGCAGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	34687426	34663260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34664231_34668925_34669061_34669486_34669664_34671779_34671847_34675029_34675183_34675471_34675632_34683284_34683463_34687243
ENSMUSG00000028295.15_0	chr4	-	747	3	FSM	ENSMUSG00000028295.15	ENSMUST00000108134.8	782	3	15	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAAAGAATAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	34778349	34768683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34769148_34771257_34771415_34778223
ENSMUSG00000028295.15_1	chr4	-	757	3	FSM	ENSMUSG00000028295.15	ENSMUST00000029972.4	786	3	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGAAAGAATAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	34778414	34768683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34769148_34771257_34771415_34778278
ENSMUSG00000028300.15_0	chr4	-	3375	10	FSM	ENSMUSG00000028300.15	ENSMUST00000084724.10	3413	10	30	8	30	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTATGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35226093	35191292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225928
ENSMUSG00000028300.15_1	chr4	-	2638	10	FSM	ENSMUSG00000028300.15	ENSMUST00000108126.8	2644	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTATGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35225834	35191292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35225787
ENSMUSG00000028300.15_2	chr4	-	3095	10	ISM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	6963	6	6917	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTATGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35218917	35191292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413
ENSMUSG00000028300.15_3	chr4	-	3180	11	FSM	ENSMUSG00000028300.15	ENSMUST00000108127.4	3193	11	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTATGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35225873	35191292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212_35217273_35218413_35218917_35225787
ENSMUSG00000028300.15_4	chr4	-	2592	9	ISM	ENSMUSG00000028300.15	ENSMUST00000108126.8	2644	10	8561	6	8561	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTGTGTATGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	35217273	35191292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_35193069_35193184_35193295_35194136_35194195_35196972_35197209_35205767_35205885_35211291_35211365_35213008_35213074_35213548_35213645_35217212
ENSMUSG00000028309.15_0	chr4	+	4297	20	FSM	ENSMUSG00000028309.15	ENSMUST00000167496.8	4312	20	9	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGCTCTTGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49632068	49656880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUSG00000028309.15_7	chr4	+	4144	21	FSM	ENSMUSG00000028309.15	ENSMUST00000029989.11	4154	21	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTTTGTGGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	49632075	49656887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_49632212_49632364_49632513_49633253_49633411_49637905_49638074_49638186_49638335_49638624_49638808_49642065_49642185_49644483_49644631_49645618_49645697_49645885_49646006_49648285_49648466_49649269_49649406_49649725_49649848_49649962_49650328_49651430_49651549_49652521_49652672_49653064_49653278_49654190_49654317_49654446_49654588_49655410_49655513_49655800
ENSMUSG00000028312.20_1	chr4	+	5384	25	FSM	ENSMUSG00000028312.20	ENSMUST00000102915.10	5404	25	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTAAATTTTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	52439252	52488250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_52439411_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028312.20_7	chr4	+	5311	25	FSM	ENSMUSG00000028312.20	ENSMUST00000117280.8	5328	25	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCTAAATTTTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	52439249	52488250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_52439335_52440200_52440424_52442252_52442403_52445951_52446075_52447712_52447752_52449320_52449432_52449610_52449656_52450819_52451054_52451227_52451378_52457261_52457496_52458414_52458575_52459020_52459139_52460157_52460297_52461049_52461170_52462802_52463008_52465932_52466069_52467789_52467915_52469771_52469966_52470765_52470910_52474920_52475116_52476643_52476845_52478395_52478513_52481669_52481831_52484039_52484188_52486496
ENSMUSG00000028314.7_0	chr4	+	2661	2	FSM	ENSMUSG00000028314.7	ENSMUST00000029995.6	2668	2	0	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAATATTTCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52596273	52612423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_52596337_52609825
ENSMUSG00000028314.7_1	chr4	+	2596	1	NIC	ENSMUSG00000028314.7	novel	2668	2	NA	NA	2618	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTAAATATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	52609823	52612419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_+_52609800_52612400
ENSMUSG00000028318.15_0	chr4	+	2972	12	FSM	ENSMUSG00000028318.15	ENSMUST00000133157.8	2986	12	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGACTAAGAATGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	45018588	45033684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45018793_45019273_45019378_45022207_45022285_45023192_45023279_45025769_45025829_45026763_45026909_45027363_45027472_45028002_45028100_45029337_45029472_45030752_45030835_45031366_45031499_45031940
ENSMUSG00000028322.12_0	chr4	-	1057	4	FSM	ENSMUSG00000028322.12	ENSMUST00000030003.10	1077	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCTATATTTGTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	45320615	45316618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45317029_45317677_45317830_45319549_45319700_45320270
ENSMUSG00000028322.12_1	chr4	-	587	3	FSM	ENSMUSG00000028322.12	ENST00000396521.3	603	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATATAAATTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	45320507	45316828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45317029_45319549_45319700_45320270
ENSMUSG00000028328.14_0	chr4	+	3148	10	FSM	ENSMUSG00000028328.14	ENSMUST00000107773.3	3158	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGGCTCTGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46038943	46116031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_46039310_46060965_46061135_46078313_46078471_46083543_46083664_46090845_46090936_46092138_46092270_46093908_46094017_46096934_46097079_46106869_46107015_46114313
ENSMUSG00000028329.14_0	chr4	-	1225	6	FSM	ENSMUSG00000028329.14	ENSMUST00000058232.11	1241	6	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACACTATCAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	46196306	46155357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46155827_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ENSMUSG00000028329.14_1	chr4	-	938	6	FSM	ENSMUSG00000028329.14	ENSMUST00000030013.12	955	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCCACGATGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46196301	46175228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46175416_46183117_46183236_46184287_46184454_46185590_46185697_46193049_46193158_46196048
ENSMUSG00000028330.9_0	chr4	+	2998	23	FSM	ENSMUSG00000028330.9	ENSMUST00000030014.9	3010	23	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTCTGGGAGTCATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	46138621	46172400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_46138887_46144784_46144874_46145373_46145475_46147378_46147536_46149861_46149970_46150638_46150761_46152015_46152086_46152909_46153126_46155749_46155848_46156759_46156824_46157822_46157934_46159658_46159724_46161260_46161324_46162091_46162167_46162960_46163065_46165165_46165289_46166737_46166841_46167301_46167396_46168450_46168555_46169128_46169244_46169944_46170074_46170471_46170586_46171892
ENSMUSG00000028331.13_1	chr4	-	1511	5	FSM	ENSMUSG00000028331.13	ENSMUST00000030015.6	1527	5	16	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGAGCTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	46389421	46379863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46380311_46382058_46382686_46386093_46386252_46387567_46387743_46389317
ENSMUSG00000028331.13_2	chr4	-	462	3	FSM	ENSMUSG00000028331.13	ENST00000611338.4	471	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTAACTCTCTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	46389405	46386097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46386252_46387522_46387743_46389317
ENSMUSG00000028331.13_3	chr4	-	377	2	ISM	ENSMUSG00000028331.13	ENST00000611338.4	471	3	1666	3	1666	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAACTCTCTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	46387744	46386096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_46386252_46387522
ENSMUSG00000028333.11_0	chr4	+	1705	7	FSM	ENSMUSG00000028333.11	ENSMUST00000102926.5	1716	7	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTAGTTGTACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	46450909	46472654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_46451350_46460089_46460240_46463806_46463930_46468558_46468788_46469882_46470008_46471397_46471468_46472086
ENSMUSG00000028334.11_0	chr4	+	2162	6	FSM	ENSMUSG00000028334.11	ENSMUST00000030018.5	2179	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTACTTACTTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	46489258	46503626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_46489491_46492705_46492922_46499042_46499143_46500065_46500221_46500712_46500980_46502434
ENSMUSG00000028337.15_0	chr4	-	4145	12	FSM	ENSMUSG00000028337.15	ENSMUST00000107756.4	4154	12	1	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCGATATTGCAATGCT	NA	NA	NA	NA	NA	NA	NA	NA	46602201	46536950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46539268_46540417_46540690_46541892_46541984_46542234_46542348_46543347_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767_46548918_46551328_46551446_46562894_46563096_46601816
ENSMUSG00000028337.15_2	chr4	-	1883	13	FSM	ENSMUSG00000028337.15	ENST00000343933.9	1889	13	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATCTGCAGTTCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	46574574	46538903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46539038_46539089_46539268_46540417_46540690_46541892_46541984_46542234_46542348_46543347_46543445_46544062_46544168_46545611_46545729_46546648_46546829_46548767_46548918_46551328_46551446_46562894_46563096_46574446
ENSMUSG00000028343.11_0	chr4	-	2601	12	FSM	ENSMUSG00000028343.11	ENSMUST00000030028.5	2624	12	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATAACTATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	48279546	48193333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_48194710_48196802_48196906_48204143_48204286_48205117_48205230_48208696_48208814_48211649_48211708_48218080_48218197_48219342_48219528_48236872_48236989_48241295_48241336_48243476_48243550_48279383
ENSMUSG00000028344.13_0	chr4	+	5617	17	FSM	ENSMUSG00000028344.13	ENSMUST00000030029.10	5633	17	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCATCCATCCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	48279810	48431947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48279976_48283225_48283356_48307682_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48422150_48425994_48426225_48427033_48427109_48429604
ENSMUSG00000028344.13_2	chr4	+	2588	16	FSM	ENSMUSG00000028344.13	ENST00000262456.6	2604	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGATCAGAACCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	48307688	48429714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48307850_48382104_48382279_48385104_48385273_48389958_48390140_48392583_48392694_48396234_48396407_48397504_48397661_48398049_48398280_48402832_48402940_48407597_48407811_48415905_48416199_48421446_48421558_48422052_48422150_48425994_48426225_48427033_48427109_48429604
ENSMUSG00000028345.16_0	chr4	-	2829	14	FSM	ENSMUSG00000028345.16	ENST00000535814.5	2848	14	10	9	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGTTCATGAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	48470056	48430863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_48431084_48433107_48433262_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883
ENSMUSG00000028345.16_4	chr4	-	3080	15	FSM	ENSMUSG00000028345.16	ENSMUST00000030030.15	3102	15	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTAAAGAAGTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	48473449	48430869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_48431084_48433107_48433319_48434901_48435084_48436436_48436518_48451925_48452060_48452892_48452982_48456733_48456912_48458537_48458714_48459250_48459387_48459863_48460103_48462768_48462882_48467663_48467905_48468280_48468994_48469883_48470073_48473265
ENSMUSG00000028347.15_0	chr4	+	2439	10	FSM	ENSMUSG00000028347.15	ENSMUST00000030032.13	2461	10	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATACGGTCTGCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	48585189	48663125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48585642_48604580_48604691_48610412_48610543_48614956_48614984_48617234_48617332_48636839_48636989_48638979_48639046_48650294_48650419_48658773_48658933_48662000
ENSMUSG00000028348.8_0	chr4	+	2029	2	FSM	ENSMUSG00000028348.8	ENSMUST00000030033.5	2054	2	8	17	8	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGTGAAAAAAGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	48663521	48673485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48664030_48671964
ENSMUSG00000028364.16_0	chr4	-	6824	25	FSM	ENSMUSG00000028364.16	ENSMUST00000030056.12	6833	25	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCTGTCATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	63938957	63878025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63900887_63901161_63911263_63911537_63913777_63914051_63918149_63918423_63918934_63919208_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067_63936478_63938380
ENSMUSG00000028364.16_1	chr4	-	7097	26	FSM	ENSMUSG00000028364.16	ENSMUST00000107372.8	7106	26	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCTGTCATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	63938957	63878025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63900887_63901161_63902696_63902970_63911263_63911537_63913777_63914051_63918149_63918423_63918934_63919208_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067_63936478_63938380
ENSMUSG00000028364.16_2	chr4	-	7091	26	FSM	ENSMUSG00000028364.16	ENSMUST00000107377.10	7100	26	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCTGTCATTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	63965247	63878025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63900887_63901161_63911263_63911537_63913777_63914051_63918149_63918423_63918934_63919208_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067_63936478_63938380_63938963_63964985
ENSMUSG00000028364.16_7	chr4	-	4825	20	FSM	ENSMUSG00000028364.16	ENST00000537320.5	4848	20	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAGACCACACGGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	63938848	63878550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63878781_63880223_63880388_63882834_63882997_63883820_63883918_63884747_63884900_63885453_63885587_63888550_63888682_63889394_63889539_63890914_63891035_63893438_63893583_63894682_63894806_63924482_63924747_63925584_63925675_63925918_63926105_63926850_63927121_63931304_63931462_63932165_63932282_63933131_63933396_63935067_63936478_63938380
ENSMUSG00000028367.6_0	chr4	-	1041	5	FSM	ENSMUSG00000028367.6	ENSMUST00000030051.6	1051	5	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	7315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGAGTGTGACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	57956401	57943372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_57943968_57945146_57945213_57950838_57950899_57951796_57951902_57956186
ENSMUSG00000028369.16_0	chr4	-	11588	48	FSM	ENSMUSG00000028369.16	ENSMUST00000042850.9	11629	48	26	15	26	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCTAAAAAAACAATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	58206570	58042456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58043169_58043962_58044057_58046541_58046638_58048110_58048207_58049109_58049281_58053118_58053296_58054538_58054713_58057929_58057994_58064171_58064328_58066428_58066655_58068356_58071140_58072662_58073336_58082650_58082819_58083966_58084159_58084514_58084600_58084809_58084987_58087727_58087848_58088217_58088392_58089351_58089523_58090580_58090705_58091872_58091998_58094000_58094177_58096158_58096361_58097283_58097442_58099942_58100145_58100762_58100877_58104437_58104552_58106294_58106392_58107516_58107609_58108227_58108390_58111298_58111461_58113488_58113651_58115696_58115931_58116487_58116653_58118124_58118234_58120544_58120667_58121826_58122022_58123144_58123277_58123981_58124090_58128765_58128896_58133303_58133423_58135425_58135621_58138604_58138785_58145157_58145338_58146514_58146674_58175930_58176108_58179451_58179708_58205842
ENSMUSG00000028378.7_0	chr4	-	2207	9	ISM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	2260	7	2260	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCACTGCTGGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58984859	58965445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743
ENSMUSG00000028378.7_1	chr4	-	2283	10	FSM	ENSMUSG00000028378.7	ENSMUST00000030069.7	2296	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCACTGCTGGCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58987113	58965445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58966764_58968758_58968878_58970990_58971100_58973534_58973691_58975860_58975979_58978013_58978182_58981826_58981884_58982879_58982926_58984743_58984860_58987037
ENSMUSG00000028381.9_0	chr4	+	3988	9	FSM	ENSMUSG00000028381.9	ENSMUST00000030074.8	4012	9	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAATCAACGAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	59189269	59222822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59189742_59207760_59207903_59211875_59211979_59213158_59213261_59213864_59213978_59217035_59217215_59218494_59218582_59219488_59219679_59220222
ENSMUSG00000028382.16_0	chr4	-	6837	14	FSM	ENSMUSG00000028382.16	ENSMUST00000030076.12	6855	14	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTTTTTCTGTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	59549348	59471869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524394_59524477_59549147
ENSMUSG00000028382.16_4	chr4	-	3397	15	FSM	ENSMUSG00000028382.16	ENSMUST00000102883.11	3409	15	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGAAACTGCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	59549281	59475267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_59477016_59477154_59477233_59481361_59481579_59482544_59482638_59485338_59485373_59485606_59485747_59488110_59488189_59493185_59493361_59494499_59494611_59501309_59501475_59514273_59514421_59517585_59517756_59524403_59524477_59546148_59546183_59549147
ENSMUSG00000028383.18_0	chr4	+	2598	11	FSM	ENSMUSG00000028383.18	ENSMUST00000030078.12	2611	11	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATGTGCCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	59581574	59618688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59581776_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ENSMUSG00000028383.18_3	chr4	+	2625	12	FSM	ENSMUSG00000028383.18	ENSMUST00000107528.8	2626	12	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATGTGCCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	59581645	59618688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59581776_59586319_59586418_59592154_59592319_59593236_59593336_59594395_59594511_59596862_59596967_59597256_59597356_59601372_59601568_59606471_59606544_59610509_59610876_59612681_59612811_59617634
ENSMUSG00000028385.15_1	chr4	+	7297	9	FSM	ENSMUSG00000028385.15	ENSMUST00000030080.7	7314	9	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATCATGTGCTCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	59805856	59904737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59806226_59857444_59857637_59868237_59868349_59879221_59879381_59884979_59885176_59886406_59886607_59892461_59892549_59894524_59894678_59898907
ENSMUSG00000028389.13_0	chr4	-	3476	4	FSM	ENSMUSG00000028389.13	ENSMUST00000068822.4	3494	4	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGAATGAAAGTGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62126677	62107788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126556
ENSMUSG00000028389.13_1	chr4	-	2541	4	FSM	ENSMUSG00000028389.13	ENSMUST00000222748.2	2564	4	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGCTCCACAGTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	62126416	62108704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62110927_62122755_62122888_62123260_62123346_62126314
ENSMUSG00000028391.17_0	chr4	-	2521	11	FSM	ENSMUSG00000028391.17	ENSMUST00000120095.8	2549	11	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAATATCCAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62389109	62370881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62388948
ENSMUSG00000028391.17_2	chr4	-	1434	11	FSM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTAGATGATTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62389124	62371876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073_62387171_62389055
ENSMUSG00000028391.17_3	chr4	-	1361	10	ISM	ENSMUSG00000028391.17	ENSMUST00000030087.14	1440	11	1958	6	1958	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTTAGATGATTTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62387166	62371876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_62372175_62374047_62374211_62375676_62375819_62377052_62377121_62378558_62378660_62378756_62378902_62380377_62380453_62381580_62381714_62382163_62382307_62387073
ENSMUSG00000028393.11_0	chr4	-	1198	12	FSM	ENSMUSG00000028393.11	ENSMUST00000030090.4	1206	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGCCCTGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62438155	62427413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438096
ENSMUSG00000028393.11_1	chr4	-	1224	12	FSM	ENSMUSG00000028393.11	ENSMUST00000107444.8	1247	12	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGCCCTGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62438116	62427413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310_62432498_62438031
ENSMUSG00000028393.11_2	chr4	-	1135	11	ISM	ENSMUSG00000028393.11	ENSMUST00000107444.8	1247	12	5638	8	5638	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGTGCCCTGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62432493	62427413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_62427548_62428341_62428472_62428751_62428839_62428930_62429019_62429104_62429161_62429760_62429850_62429938_62430023_62430123_62430260_62431107_62431205_62431768_62431820_62432310
ENSMUSG00000028394.10_0	chr4	-	1790	4	FSM	ENSMUSG00000028394.10	ENSMUST00000030091.10	1805	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGATGACTCATACAAT	NA	NA	NA	NA	NA	NA	NA	NA	62443297	62440892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62442348_62442554_62442674_62442986_62443073_62443167
ENSMUSG00000028397.14_0	chr4	+	4186	22	FSM	ENSMUSG00000028397.14	ENSMUST00000077851.10	4189	22	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	74160736	74324097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_74160878_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ENSMUSG00000028397.14_5	chr4	+	4191	22	FSM	ENSMUSG00000028397.14	ENSMUST00000030102.12	4196	22	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTTCTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	74170177	74324097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_74170324_74181045_74181207_74189430_74189607_74199133_74199249_74216677_74216872_74225201_74225252_74229883_74229988_74233748_74233887_74248891_74249086_74251869_74252106_74252785_74253106_74255118_74255228_74261606_74261789_74263679_74263894_74266636_74266714_74275578_74275635_74277656_74277766_74291802_74291989_74295866_74296038_74309613_74309734_74317583_74317677_74323057
ENSMUSG00000028398.9_0	chr4	-	727	2	FSM	ENSMUSG00000028398.9	ENSMUST00000030103.9	741	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAAGTAGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75196534	75195596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_75196007_75196217
ENSMUSG00000028399.19_11	chr4	-	777	4	FSM	ENSMUSG00000028399.19	ENST00000463477.5	796	4	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAAACCTGAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	76165126	76058340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_76058650_76058750_76058940_76161881_76162024_76164989
ENSMUSG00000028399.19_3	chr4	-	9856	35	NIC	ENSMUSG00000028399.19	novel	9899	36	NA	NA	29	-4	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCAGTCCTGGGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76368188	75859479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697_76003796_76004248_76004837_76009658_76009777_76013756_76013784_76017648_76017843_76018683_76018990_76021191_76021337_76025519_76025654_76046721_76047304_76051299_76051570_76053781_76053794_76055047_76055159_76056792_76056811_76058750_76058940_76161881_76162024_76164989_76165136_76243416_76243583_76367879
ENSMUSG00000028399.19_6	chr4	-	4723	29	NIC	ENSMUSG00000028399.19	novel	4793	31	NA	NA	-81	-28	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTACAAAAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76243582	75863070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697_76003796_76021191_76021337_76025519_76025654_76046721_76047304_76051299_76051570_76053781_76053794_76055047_76055159_76056792_76056811_76058750_76058940_76161881_76162024_76164989_76165136_76243416
ENSMUSG00000028399.19_8	chr4	-	4713	28	NIC	ENSMUSG00000028399.19	novel	4793	31	NA	NA	-81	-26	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TACAAAAAACAAACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76243582	75863068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_75863264_75865279_75865416_75868887_75869043_75872309_75872436_75873452_75873580_75874542_75874722_75875332_75875619_75900190_75900346_75900822_75900943_75916737_75916914_75930293_75930418_75957517_75957616_75968563_75968677_75977905_75978067_75984404_75984615_75990180_75990272_76002554_76002815_76003697_76003796_76021191_76021337_76025519_76025654_76046721_76047304_76051299_76051570_76055047_76055159_76056792_76056811_76058750_76058940_76161881_76162024_76164989_76165136_76243416
ENSMUSG00000028402.19_0	chr4	-	7503	47	FSM	ENSMUSG00000028402.19	ENSMUST00000107262.8	7518	47	2	13	2	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAACAAGCAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	81361040	81196749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245198_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ENSMUSG00000028402.19_1	chr4	-	7226	45	FSM	ENSMUSG00000028402.19	ENSMUST00000107258.9	7241	45	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAACAAGCAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	81339472	81196749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409
ENSMUSG00000028402.19_2	chr4	-	7502	47	FSM	ENSMUSG00000028402.19	ENSMUST00000102830.10	7512	47	2	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAACAAGCAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	81361042	81196749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81231736_81231836_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108_81337276_81339409_81339480_81360872
ENSMUSG00000028402.19_5	chr4	-	7136	44	ISM	ENSMUSG00000028402.19	ENSMUST00000107258.9	7241	45	2231	8	2231	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAACAAGCAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	81337248	81196749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_81198007_81199937_81200062_81200893_81201007_81201569_81201675_81202813_81202937_81203699_81203744_81204604_81204696_81205896_81205984_81208467_81208616_81210655_81210850_81210997_81211082_81211716_81211863_81213655_81213822_81215523_81215599_81215698_81215792_81221829_81221911_81225036_81225128_81225334_81225427_81226466_81226664_81228393_81228557_81235830_81235942_81238582_81238761_81245101_81245195_81247663_81247769_81253912_81254112_81266866_81266982_81267238_81267515_81274566_81274735_81276862_81276980_81278240_81278451_81279552_81279739_81281262_81281428_81282230_81282378_81284145_81284253_81286922_81286995_81287801_81287965_81296200_81296290_81296593_81296709_81299907_81300118_81301544_81301674_81301995_81302210_81303400_81303541_81304502_81304716_81337108
ENSMUSG00000028403.16_0	chr4	-	8751	9	FSM	ENSMUSG00000028403.16	ENSMUST00000030110.15	8763	9	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATAGGAATGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82777907	82716983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_82724699_82725249_82725294_82738566_82738684_82753682_82753822_82756512_82756625_82762340_82762440_82765779_82765977_82772205_82772353_82777726
ENSMUSG00000028405.10_0	chr4	+	3816	21	FSM	ENSMUSG00000028405.10	ENSMUST00000102973.4	3832	21	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACGTGTTGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	40143089	40198331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40143542_40163718_40163846_40164608_40164778_40167053_40167192_40175664_40175735_40175841_40176026_40176495_40176636_40177778_40177951_40178972_40179074_40180171_40180289_40181382_40181543_40182803_40182940_40183567_40183653_40184900_40185058_40186315_40186441_40188165_40188271_40189343_40189487_40190736_40190885_40193738_40193862_40196244_40196431_40197553
ENSMUSG00000028407.5_0	chr4	+	1026	2	FSM	ENSMUSG00000028407.5	ENSMUST00000129758.3	1044	2	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAATGACTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	40269583	40270927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40269720_40270037
ENSMUSG00000028409.12_0	chr4	-	2399	12	FSM	ENSMUSG00000028409.12	ENSMUST00000030117.5	2418	12	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAAATAGGTTCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	40757912	40736549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40737396_40738289_40738443_40739518_40739687_40743014_40743142_40744030_40744159_40745451_40745569_40748538_40748659_40751924_40752054_40753486_40753598_40754507_40754661_40755626_40755838_40757776
ENSMUSG00000028410.14_0	chr4	+	3360	9	FSM	ENSMUSG00000028410.14	ENSMUST00000030118.10	3376	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGGCTTGCTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	40722489	40734958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40722634_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028410.14_7	chr4	+	5619	9	FSM	ENSMUSG00000028410.14	ENSMUST00000164233.8	5622	9	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAATCAATCCGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	40722924	40737149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40723137_40723702_40723845_40723972_40724151_40726104_40726210_40727955_40728184_40730172_40730288_40731683_40731800_40732075_40732177_40732727
ENSMUSG00000028411.16_0	chr4	-	5244	8	FSM	ENSMUSG00000028411.16	ENSMUST00000030119.10	5250	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATAAAGTAGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	40703194	40682387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695424_40697216_40697354_40703136
ENSMUSG00000028411.16_14	chr4	-	871	7	FSM	ENSMUSG00000028411.16	ENST00000477119.2	883	7	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCGGGTGACACTCG	NA	NA	NA	NA	NA	NA	NA	NA	40697340	40686572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695020_40695376_40695424_40697216
ENSMUSG00000028411.16_7	chr4	-	924	6	FSM	ENSMUSG00000028411.16	ENST00000379813.7	940	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCGGGTGACACTCG	NA	NA	NA	NA	NA	NA	NA	NA	40697336	40686572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40694851_40695137_40695376_40695424_40697216
ENSMUSG00000028411.16_8	chr4	-	823	6	FSM	ENSMUSG00000028411.16	ENST00000436040.7	838	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCGGGTGACACTCG	NA	NA	NA	NA	NA	NA	NA	NA	40697337	40686572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695022_40697216
ENSMUSG00000028411.16_9	chr4	-	980	7	FSM	ENSMUSG00000028411.16	ENST00000673416.1	995	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGGCGGGTGACACTCG	NA	NA	NA	NA	NA	NA	NA	NA	40697337	40686572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40686714_40688108_40688213_40690968_40691196_40693389_40693450_40694851_40695137_40695376_40695419_40697216
ENSMUSG00000028412.18_0	chr4	+	3087	16	FSM	ENSMUSG00000028412.18	ENSMUST00000102911.10	3102	16	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCATTATGCGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	53440419	53622470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53621594
ENSMUSG00000028412.18_2	chr4	+	4374	16	FSM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTATGCTCTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53440670	53567810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53440717_53481463_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ENSMUSG00000028412.18_4	chr4	+	4328	15	ISM	ENSMUSG00000028412.18	ENSMUST00000107651.9	4382	16	40793	8	40780	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTATGCTCTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53481463	53567810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_53481554_53491387_53491531_53517544_53517682_53528654_53528749_53536322_53536493_53538389_53538480_53541300_53541441_53542364_53542552_53543541_53543708_53544540_53544698_53545684_53545769_53553485_53553624_53560914_53561152_53563140_53563222_53565396
ENSMUSG00000028413.14_0	chr4	-	3972	6	FSM	ENSMUSG00000028413.14	ENSMUST00000030121.13	3983	6	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGCTTCTTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40853996	40804603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40807318_40807732_40807838_40809678_40809802_40812684_40812873_40823438_40823675_40853390
ENSMUSG00000028414.18_0	chr4	+	6073	10	FSM	ENSMUSG00000028414.18	ENSMUST00000128667.8	6080	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTGTTTGTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	53714004	53765785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53714196_53720006_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747143_53748368_53748497_53761173
ENSMUSG00000028414.18_4	chr4	+	1310	8	NNC	ENSMUSG00000028414.18	novel	1332	9	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAATACAGGATGTACC	NA	NA	NA	NA	NA	NA	NA	NA	53720056	53750733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_53720210_53729979_53730040_53731131_53731336_53734849_53735128_53737526_53737660_53744618_53744749_53747008_53747147_53750519
ENSMUSG00000028415.5_0	chr4	+	378	4	FSM	ENSMUSG00000028415.5	ENSMUST00000030122.5	397	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGTGAAGTGGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	40920064	40931389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40920156_40924923_40924965_40929078_40929192_40931256
ENSMUSG00000028416.14_0	chr4	-	1315	7	FSM	ENSMUSG00000028416.14	ENSMUST00000030125.5	1295	7	-18	-2	-18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3034	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGGCTCTGTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	40948261	40936398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40936677_40937131_40937195_40939076_40939185_40941524_40941639_40943624_40943708_40946168_40946298_40947721
ENSMUSG00000028419.6_0	chr4	+	1502	8	FSM	ENSMUSG00000028419.6	ENSMUST00000030128.6	1519	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATGTAATTGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	40948416	40965296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40960858_40960972_40964594
ENSMUSG00000028419.6_9	chr4	+	1395	7	FSM	ENSMUSG00000028419.6	ENST00000419016.6	1415	7	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGAAAGGAAAGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	40948471	40965357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40948677_40949453_40949559_40950513_40950561_40952367_40952462_40952981_40953054_40958889_40958999_40964594
ENSMUSG00000028420.14_0	chr4	+	2848	6	FSM	ENSMUSG00000028420.14	ENSMUST00000030127.13	2862	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGCAAGGGGTATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53826054	53862015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53826221_53840626_53840784_53848865_53849051_53850473_53850562_53854311_53854430_53859881
ENSMUSG00000028423.16_0	chr4	+	3592	16	FSM	ENSMUSG00000028423.16	ENSMUST00000091614.7	3617	16	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTCTTGTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	40970929	41012607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41011526
ENSMUSG00000028423.16_1	chr4	+	4338	16	FSM	ENSMUSG00000028423.16	ENSMUST00000030133.15	4349	16	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTGTTGCCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	40970912	41013867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41012057
ENSMUSG00000028423.16_3	chr4	+	4572	24	FSM	ENSMUSG00000028423.16	ENSMUST00000098143.11	4594	24	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTACTTGTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40970919	41025985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_40971060_40976352_40977343_40984892_40985052_40986692_40986771_40988621_40988728_40990792_40990865_40991743_40991884_40993758_40993859_40993962_40994181_40996814_40996913_40999684_40999716_41003017_41003098_41004327_41004437_41004825_41004946_41009189_41009270_41015202_41015434_41016076_41016151_41017971_41018074_41018447_41018490_41021748_41021848_41022259_41022327_41023613_41023760_41024473_41024579_41024800
ENSMUSG00000028426.11_0	chr4	+	3790	10	FSM	ENSMUSG00000028426.11	ENSMUST00000030134.9	3810	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCTGACATTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	55350052	55392227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_55350428_55366776_55366859_55368044_55368125_55370203_55370473_55378233_55378290_55380988_55381117_55382479_55382616_55383586_55383715_55385409_55385602_55389883
ENSMUSG00000028427.14_0	chr4	-	1009	6	FSM	ENSMUSG00000028427.14	ENST00000624075.3	1019	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGCAGAGGAGTGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	41048056	41034706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41034972_41035134_41035254_41035492_41035631_41036013_41036138_41045279_41045398_41047811
ENSMUSG00000028430.15_0	chr4	-	4589	26	FSM	ENSMUSG00000028430.15	ENSMUST00000030138.9	4599	26	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGACTTGTCTTTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	41124446	41114427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41115507_41115681_41115784_41115883_41116079_41116375_41116466_41116594_41116720_41117394_41117493_41117659_41117813_41118089_41118254_41118417_41118573_41118648_41118767_41118882_41119024_41119236_41119313_41119412_41119562_41119753_41119877_41120006_41120185_41120273_41120390_41120537_41120640_41120723_41120783_41121006_41121128_41121210_41121366_41121451_41121587_41121778_41121948_41122123_41122304_41123258_41123376_41123458_41123660_41124158
ENSMUSG00000028431.12_0	chr4	-	6152	37	FSM	ENSMUSG00000028431.12	ENSMUST00000030140.3	6160	37	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCTCTCTTCTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	56802323	56749679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_56751720_56755303_56755380_56757116_56757272_56758212_56758341_56758963_56759076_56759800_56759915_56762248_56762310_56762840_56762904_56767814_56767877_56769013_56769216_56770980_56771079_56771432_56771557_56772380_56772530_56773015_56773102_56773198_56773337_56774521_56774602_56774687_56774767_56775016_56775091_56775424_56775541_56776689_56776796_56776884_56776939_56778958_56779063_56779656_56779764_56781025_56781218_56784537_56784638_56786587_56786753_56787740_56787972_56790130_56790225_56790887_56791012_56792026_56792118_56792384_56792482_56794089_56794176_56795505_56795587_56796503_56796586_56798657_56798811_56799974_56800138_56802158
ENSMUSG00000028433.15_0	chr4	-	4355	29	FSM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATTCTTGGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	41275127	41194320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534_41251672_41275039
ENSMUSG00000028433.15_1	chr4	-	4268	28	ISM	ENSMUSG00000028433.15	ENSMUST00000030143.13	4368	29	23463	5	23463	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATTCTTGGTCTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	41251672	41194320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_41195247_41195333_41195526_41195607_41195673_41195745_41195854_41195943_41196044_41196327_41196534_41196729_41196809_41199217_41199266_41199493_41199586_41199715_41199903_41201463_41201534_41202273_41202458_41203532_41203573_41205523_41205738_41206152_41206326_41206832_41207105_41209352_41209570_41211704_41211895_41216565_41216634_41218310_41218364_41221555_41221622_41223355_41223460_41226279_41226335_41227198_41227277_41229694_41229849_41233603_41233715_41235516_41235595_41251534
ENSMUSG00000028435.9_0	chr4	-	720	5	FSM	ENSMUSG00000028435.9	ENST00000645858.1	737	5	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGGGGACCAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	41098118	41093483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41093703_41094265_41094385_41094700_41094839_41095144_41095272_41098001
ENSMUSG00000028436.9_0	chr4	-	3420	9	FSM	ENSMUSG00000028436.9	ENSMUST00000030145.9	3442	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGAGCTGTTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	41314875	41291307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41293215_41293932_41294112_41296310_41296474_41298285_41298352_41299406_41299601_41301333_41301395_41302613_41302821_41313210_41313466_41314487
ENSMUSG00000028437.15_0	chr4	+	2497	6	FSM	ENSMUSG00000028437.15	ENSMUST00000108060.10	2514	6	1	16	1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCTAAAAGGTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	41348996	41389750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41388095_41388198_41388680
ENSMUSG00000028437.15_1	chr4	+	3438	7	FSM	ENSMUSG00000028437.15	ENSMUST00000072866.12	3456	7	10	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAACCATAGAGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	41349005	41390517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41349232_41366889_41366931_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ENSMUSG00000028437.15_2	chr4	+	1947	6	FSM	ENSMUSG00000028437.15	ENST00000625521.2	1961	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGGCTTTCAGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	41349012	41389074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41349232_41371724_41371850_41378946_41379871_41387174_41387358_41388095_41388198_41388680
ENSMUSG00000028438.17_0	chr4	-	5570	13	FSM	ENSMUSG00000028438.17	ENSMUST00000108055.9	5593	13	16	7	16	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAACCAGCTACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	41464824	41390751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41392253_41392877_41392972_41393437_41395664_41397546_41397657_41400436_41400509_41403789_41403896_41404676_41404799_41409731_41409820_41413828_41414045_41414901_41415000_41423451_41423636_41428344_41428983_41464709
ENSMUSG00000028439.15_0	chr4	-	872	7	FSM	ENSMUSG00000028439.15	ENST00000379084.5	890	7	8	10	-2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGCCAGACTCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	41569511	41517700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41517855_41520303_41520399_41520911_41520967_41521611_41521693_41521866_41521970_41524365_41524415_41569176
ENSMUSG00000028439.15_7	chr4	-	755	4	FSM	ENSMUSG00000028439.15	ENST00000379078.1	765	4	10	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGGGGTGGGTTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	41569509	41521473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41521693_41521866_41521970_41524314_41524415_41569176
ENSMUSG00000028441.13_0	chr4	-	565	4	FSM	ENSMUSG00000028441.13	ENST00000379124.5	582	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAAAGACTGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41507616	41505018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41505169_41505567_41505652_41507093_41507329_41507520
ENSMUSG00000028441.13_1	chr4	-	1087	7	FSM	ENSMUSG00000028441.13	ENST00000297623.7	1105	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAAAGACTGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41517321	41505018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41505169_41505567_41505652_41507098_41507329_41507520_41507594_41508516_41508628_41511431_41511577_41517027
ENSMUSG00000028441.13_3	chr4	-	567	4	ISM	ENSMUSG00000028441.13	ENSMUST00000030152.13	1114	7	9713	10	5	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAAAGACTGCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41507620	41505018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_41505169_41505567_41505655_41507098_41507329_41507520
ENSMUSG00000028443.7_0	chr4	+	843	3	FSM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGATGCTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41465150	41480924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41465181_41477513_41477648_41480245
ENSMUSG00000028443.7_1	chr4	+	804	2	ISM	ENSMUSG00000028443.7	ENSMUST00000030154.7	845	3	12372	2	12372	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTGATGCTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41477522	41480924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_41477648_41480245
ENSMUSG00000028445.8_0	chr4	-	1257	2	FSM	ENSMUSG00000028445.8	ENSMUST00000127306.2	1269	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCCAGCTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41640318	41638149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41639002_41639913
ENSMUSG00000028447.12_1	chr4	-	961	7	FSM	ENSMUSG00000028447.12	ENSMUST00000030158.11	973	7	9	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATACAGTGGGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	41723161	41714800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41717356_41717441_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_6	chr4	-	482	6	FSM	ENSMUSG00000028447.12	ENST00000378916.8	492	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCCCCACCAGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	41723123	41715157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41715260_41715395_41715456_41716395_41716455_41719836_41719924_41720782_41720868_41723034
ENSMUSG00000028447.12_7	chr4	-	395	5	ISM	ENSMUSG00000028447.12	ENST00000378916.8	492	6	2263	1	2263	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTCCCCACCAGGGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	41720869	41715157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_41715260_41715395_41715456_41716395_41716455_41719836_41719924_41720782
ENSMUSG00000028452.8_0	chr4	-	3214	17	FSM	ENSMUSG00000028452.8	ENST00000677257.1	3231	17	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCATCCTACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	43000374	42979925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996063_42996231_42996344_43000161
ENSMUSG00000028452.8_1	chr4	-	3380	16	FSM	ENSMUSG00000028452.8	ENST00000679902.1	3396	16	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTGCATCCTACTGACA	NA	NA	NA	NA	NA	NA	NA	NA	43000375	42979925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_14	chr4	-	3297	17	FSM	ENSMUSG00000028452.8	ENSMUST00000030164.8	3316	17	11	8	11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGGAGCCTGCGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	43000496	42979970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_42980635_42980793_42980949_42982530_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028452.8_63	chr4	-	2871	16	FSM	ENSMUSG00000028452.8	ENST00000679647.1	2893	16	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATGTTGGGTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	43000442	42979985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_42980510_42982607_42982687_42982840_42983150_42983363_42983577_42984303_42984427_42984530_42984696_42985153_42985267_42985931_42986068_42986145_42986280_42988661_42988765_42990745_42990878_42993148_42993280_42993685_42993829_42995895_42996069_42996231_42996344_43000161
ENSMUSG00000028453.11_0	chr4	-	2734	14	FSM	ENSMUSG00000028453.11	ENSMUST00000030165.5	2771	14	29	8	29	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCTTATTTTAAGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	43010326	43002350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43003093_43003226_43003345_43003782_43003933_43004558_43004606_43004743_43005034_43005210_43005278_43006461_43006614_43006749_43006897_43006983_43007115_43007267_43007404_43008710_43008914_43009147_43009280_43009706_43009801_43010001
ENSMUSG00000028454.17_0	chr4	-	4225	10	FSM	ENSMUSG00000028454.17	ENSMUST00000098109.9	4239	10	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGCTAAGATCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	43025743	43017635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUSG00000028454.17_2	chr4	-	2267	11	FSM	ENSMUSG00000028454.17	ENST00000298004.9	2290	11	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTGGAATAAAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	43025068	43017667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43018039_43018147_43018219_43019211_43019436_43019646_43019854_43020266_43020319_43021569_43021795_43022011_43022195_43022606_43022767_43023369_43023494_43023671_43023816_43024562
ENSMUSG00000028455.16_0	chr4	-	1855	10	FSM	ENSMUSG00000028455.16	ENSMUST00000030169.15	1874	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGCAGTTGAGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	43031700	43027698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43029769_43029905_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028455.16_8	chr4	-	1179	9	FSM	ENSMUSG00000028455.16	ENST00000452248.6	1196	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCACTCGGGTCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43031448	43027987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43028294_43028937_43029067_43029278_43029359_43029492_43029638_43030048_43030151_43030239_43030299_43030435_43030536_43030970_43031109_43031328
ENSMUSG00000028458.13_0	chr4	+	3929	10	FSM	ENSMUSG00000028458.13	ENSMUST00000060864.13	3947	10	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTTGACTGTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	43441950	43448058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43443639_43443782_43443905_43444030_43444080_43444572_43444720_43445040_43445124_43445283_43445375_43445522_43445607_43445728_43445819_43445938_43446069_43446613
ENSMUSG00000028459.12_0	chr4	-	2580	7	FSM	ENSMUSG00000028459.12	ENSMUST00000098104.10	2583	7	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAAAAAAAAAAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	43454627	43446464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43448037_43448259_43448416_43449451_43449529_43450069_43450222_43452306_43452640_43454241_43454350_43454445
ENSMUSG00000028461.13_0	chr4	+	807	6	FSM	ENSMUSG00000028461.13	ENSMUST00000030181.12	817	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGGTGTTCCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	43493370	43495920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43493537_43493607_43493760_43495194_43495256_43495341_43495433_43495508_43495622_43495696
ENSMUSG00000028463.15_0	chr4	+	1987	11	FSM	ENSMUSG00000028463.15	ENSMUST00000030183.10	2023	11	29	7	29	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAAACTCGTGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	43506994	43513722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43507396_43508313_43508344_43508602_43508774_43508892_43509036_43509117_43509211_43510196_43510264_43511826_43511985_43512141_43512278_43512411_43512439_43512851_43512934_43513043
ENSMUSG00000028464.17_0	chr4	-	2083	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107913.10	2098	9	9	6	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCATGCCAGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	43523379	43514717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43516004_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_1	chr4	-	2152	9	FSM	ENSMUSG00000028464.17	ENSMUST00000030184.12	2175	9	16	7	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCATGCCAGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	43523448	43514717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43516004_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_12	chr4	-	1000	9	FSM	ENSMUSG00000028464.17	ENST00000329305.6	1015	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTACTGGCATGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	43523443	43514722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43518643_43518720_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028464.17_2	chr4	-	1147	9	FSM	ENSMUSG00000028464.17	ENSMUST00000107914.10	1164	9	10	7	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCATGCCAGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	43523585	43514717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43514862_43518229_43518300_43518401_43518465_43519002_43519079_43519226_43519298_43519388_43519507_43519610_43519745_43522674_43522801_43523240
ENSMUSG00000028465.17_0	chr4	-	8377	57	FSM	ENSMUSG00000028465.17	ENSMUST00000030187.14	8393	57	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTACAGCTGCAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43562413	43531525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43532086_43532191_43532321_43532829_43533013_43533125_43533189_43533303_43533430_43533553_43533679_43533862_43533969_43534389_43534498_43534579_43534766_43535519_43535637_43535737_43535864_43535952_43536137_43536243_43536411_43536523_43536671_43537787_43537908_43537985_43538088_43538189_43538340_43538431_43538603_43538677_43538780_43539090_43539224_43539365_43539548_43539636_43539778_43539975_43540138_43540529_43540674_43542480_43542604_43542701_43542792_43542874_43542969_43543143_43543284_43543435_43543634_43543816_43543937_43544279_43544489_43544575_43544679_43544840_43544970_43545093_43545229_43545406_43545521_43545605_43545723_43545859_43545989_43546749_43546917_43547501_43547797_43547978_43548147_43549085_43549185_43549320_43549530_43549722_43549832_43549937_43550052_43550197_43550379_43550961_43551039_43551185_43551288_43552985_43553142_43553445_43553551_43554277_43554339_43555046_43555175_43555268_43555412_43555601_43555755_43555854_43555985_43556288_43556387_43556620_43556784_43562129
ENSMUSG00000028466.16_0	chr4	+	1874	9	FSM	ENSMUSG00000028466.16	ENSMUST00000102944.11	1884	9	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTTTTTACTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	43562341	43567060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43562960_43563049_43563207_43563280_43563352_43563468_43563559_43565260_43565368_43565466_43565536_43566119_43566205_43566293_43566379_43566468
ENSMUSG00000028467.16_0	chr4	-	3528	17	FSM	ENSMUSG00000028467.16	ENSMUST00000030189.14	3544	17	3	13	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAGAAAACTAGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	43578870	43566940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43567468_43567724_43567917_43567999_43568116_43568195_43568339_43568437_43568545_43568654_43568807_43568885_43568994_43569180_43569286_43569488_43569662_43569829_43569956_43570036_43570191_43570345_43570449_43570671_43570912_43571188_43571408_43573750_43573867_43574027_43574120_43578015
ENSMUSG00000028467.16_1	chr4	-	1510	2	FSM	ENSMUSG00000028467.16	ENST00000378088.1	1533	2	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTCAGAAAACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	43568538	43566945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43567917_43567999
ENSMUSG00000028468.16_0	chr4	+	5863	9	FSM	ENSMUSG00000028468.16	ENSMUST00000107886.9	5888	9	13	12	-7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAAATCAATGTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	43578727	43587475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43579004_43579374_43579510_43579886_43580024_43580295_43580380_43580476_43580627_43580863_43581011_43581187_43581316_43581486_43581677_43582859
ENSMUSG00000028469.16_0	chr4	+	3635	22	FSM	ENSMUSG00000028469.16	ENSMUST00000030191.15	3660	22	3	22	3	-22	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAACAACAACAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43631937	43651222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43632852_43633524_43633731_43640139_43640254_43640535_43640672_43640918_43641014_43641193_43641327_43641548_43641634_43643053_43643175_43643334_43643410_43643605_43643684_43644082_43644188_43644307_43644380_43646540_43646701_43646915_43647072_43647148_43647318_43647470_43647618_43648076_43648201_43648346_43648416_43650148_43650324_43650393_43650493_43650707_43650800_43650912
ENSMUSG00000028470.11_0	chr4	-	603	5	FSM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	43656459	43654228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905_43655047_43656358
ENSMUSG00000028470.11_1	chr4	-	505	4	ISM	ENSMUSG00000028470.11	ENSMUST00000030192.5	610	5	1417	0	1417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTATCCCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	43655049	43654228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_43654412_43654512_43654586_43654715_43654821_43654905
ENSMUSG00000028475.10_0	chr4	+	494	2	FSM	ENSMUSG00000028475.10	ENST00000636776.1	535	2	35	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCTGCTCACGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	43730699	43732078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43730736_43731620
ENSMUSG00000028475.10_4	chr4	+	538	1	ISM	ENSMUSG00000028475.10	ENSMUST00000131248.2	4086	2	1596	2367	930	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	859	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGACCTTGAATGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	43731629	43732167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_43731600_43732200
ENSMUSG00000028478.19_0	chr4	+	1692	6	FSM	ENSMUSG00000028478.19	ENSMUST00000107846.10	1710	6	8	10	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATGTATACATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44004459	44032836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44004701_44012261_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUSG00000028478.19_14	chr4	+	1060	5	FSM	ENSMUSG00000028478.19	ENSMUST00000170241.8	1079	5	10	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATGTATACATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44012652	44032836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44013009_44018812_44018851_44019873_44019992_44025448_44025561_44032400
ENSMUSG00000028478.19_23	chr4	+	897	3	FSM	ENSMUSG00000028478.19	ENST00000540080.5	918	3	10	11	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAATGTATACATGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	44012659	44032836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44013009_44025448_44025561_44032400
ENSMUSG00000028478.19_35	chr4	+	661	5	FSM	ENSMUSG00000028478.19	ENST00000466396.5	676	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGTGGAAACACTACGT	NA	NA	NA	NA	NA	NA	NA	NA	44012727	44032578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44013009_44025448_44025561_44030214_44030269_44031399_44031436_44032400
ENSMUSG00000028479.19_0	chr4	-	5359	12	FSM	ENSMUSG00000028479.19	ENSMUST00000030201.14	5384	12	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTAAACTAGTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44084164	44034086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44084047
ENSMUSG00000028479.19_1	chr4	-	2902	12	FSM	ENSMUSG00000028479.19	ENSMUST00000102936.9	2920	12	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCAAACTTGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	44072770	44036835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44055204_44055358_44059775_44060228_44066754_44066961_44072361
ENSMUSG00000028479.19_4	chr4	-	1862	9	FSM	ENSMUSG00000028479.19	ENST00000539208.5	1876	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGGACAGAGACTCGGGA	NA	NA	NA	NA	NA	NA	NA	NA	44060222	44037102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44037354_44038946_44039064_44040253_44040437_44041662_44041885_44042162_44042293_44044758_44044970_44045902_44045991_44052770_44052984_44059775
ENSMUSG00000028480.15_0	chr4	+	2309	5	FSM	ENSMUSG00000028480.15	ENSMUST00000030202.14	2320	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTCCTCTAATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	43957409	43979116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43957774_43968111_43968221_43968571_43968676_43970499_43970578_43977462
ENSMUSG00000028480.15_2	chr4	+	1812	3	FSM	ENSMUSG00000028480.15	ENSMUST00000107855.2	1816	3	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTCCTCTAATGCGA	NA	NA	NA	NA	NA	NA	NA	NA	43957693	43979116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43957774_43970499_43970578_43977462
ENSMUSG00000028483.14_0	chr4	+	1324	10	FSM	ENSMUSG00000028483.14	ENST00000610884.4	1349	10	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	2629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGGGAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83335863	83375318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277_83371328_83375246
ENSMUSG00000028483.14_18	chr4	+	1383	9	FSM	ENSMUSG00000028483.14	ENSMUST00000030206.10	1405	9	14	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACAACTTCTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83335974	83371569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123_83360207_83368307_83368473_83369441_83369550_83371277
ENSMUSG00000028483.14_24	chr4	+	918	6	FSM	ENSMUSG00000028483.14	ENSMUST00000071544.11	942	6	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATACAGCTGTTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	83335983	83360315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_83336292_83336942_83337021_83346018_83346104_83353427_83353533_83354560_83354711_83360123
ENSMUSG00000028484.17_0	chr4	-	3228	16	FSM	ENSMUSG00000028484.17	ENSMUST00000030207.15	3251	16	17	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACTCTATTAGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	83404679	83373922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83375317_83376311_83376424_83378080_83378295_83378390_83378493_83378695_83378767_83379422_83379479_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUSG00000028484.17_7	chr4	-	1879	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107215.9	1898	11	9	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83404686	83380117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83380711_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUSG00000028484.17_8	chr4	-	1950	11	FSM	ENSMUSG00000028484.17	ENSMUST00000107214.9	1973	11	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACCTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	83404677	83380117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83380791_83381831_83381951_83383161_83383388_83384944_83385021_83386819_83386914_83391276_83391340_83392514_83392620_83394518_83394658_83400693_83400771_83403953_83404166_83404511
ENSMUSG00000028487.19_0	chr4	-	4133	8	FSM	ENSMUSG00000028487.19	ENSMUST00000102820.9	4133	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84593271	84193331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84424764_84424849_84464441_84464643_84474015_84474142_84593211
ENSMUSG00000028487.19_1	chr4	-	4073	7	ISM	ENSMUSG00000028487.19	ENSMUST00000102820.9	4133	8	119130	0	119130	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84474141	84193331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84424764_84424849_84464441_84464643_84474015
ENSMUSG00000028487.19_2	chr4	-	3944	7	FSM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAGCAATTGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	84593304	84193469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015_84474142_84593211
ENSMUSG00000028487.19_3	chr4	-	3854	6	ISM	ENSMUSG00000028487.19	ENSMUST00000107198.9	3948	7	119164	0	119131	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAATTGTATTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	84474140	84193465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_84194685_84209929_84211900_84309125_84309362_84332482_84332586_84464441_84464643_84474015
ENSMUSG00000028492.14_0	chr4	-	1339	2	FSM	ENSMUSG00000028492.14	ENST00000380530.1	1360	2	15	6	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGAATAAAGGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	86406142	86362881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86364055_86405976
ENSMUSG00000028494.13_1	chr4	-	1875	8	FSM	ENSMUSG00000028494.13	ENSMUST00000000466.13	1888	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACGTTTATGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	86588289	86574806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86575642_86576817_86576953_86578324_86578507_86580170_86580451_86582665_86582749_86586603_86586800_86586886_86586943_86588181
ENSMUSG00000028495.15_0	chr4	-	873	5	FSM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	22477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTCATTAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86775645	86772897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964_86775097_86775557
ENSMUSG00000028495.15_2	chr4	-	783	4	ISM	ENSMUSG00000028495.15	ENSMUST00000102814.5	878	5	555	1	555	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCTTTCATTAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	86775094	86772897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_86773193_86774103_86774251_86774382_86774594_86774964
ENSMUSG00000028496.18_0	chr4	-	6059	11	FSM	ENSMUSG00000028496.18	ENSMUST00000078090.12	6069	11	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTATTGTGACTCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	87951597	87688167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87951320
ENSMUSG00000028496.18_2	chr4	-	2012	11	FSM	ENSMUSG00000028496.18	ENST00000630269.2	2024	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCCCCAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87950972	87692036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760_87949942_87950873
ENSMUSG00000028496.18_3	chr4	-	1914	10	ISM	ENSMUSG00000028496.18	ENST00000630269.2	2024	11	1035	7	1035	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATCCCCAGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	87949942	87692036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_87692384_87700523_87700596_87701885_87701958_87707523_87707624_87710089_87710220_87712172_87712249_87758918_87759627_87792074_87792219_87798302_87798386_87949760
ENSMUSG00000028497.13_0	chr4	-	2079	7	FSM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAAAAAGTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	88357153	88331166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696_88355801_88357069
ENSMUSG00000028497.13_1	chr4	-	1997	6	ISM	ENSMUSG00000028497.13	ENSMUST00000030221.3	2089	7	1361	0	1361	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAAAAAAAAAAGTGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	88355802	88331166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_88332584_88337935_88338062_88341227_88341335_88344972_88345086_88353175_88353304_88355696
ENSMUSG00000028514.16_9	chr4	+	625	4	FSM	ENSMUSG00000028514.16	ENST00000433802.1	644	4	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	2284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAGAAGTACATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	106267344	106269437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106267550_106267980_106268106_106268496_106268643_106269288
ENSMUSG00000028517.9_0	chr4	+	3139	6	FSM	ENSMUSG00000028517.9	ENSMUST00000064139.8	3159	6	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAACTAACCAAGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	105014549	105089947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_105015161_105051999_105052158_105065720_105066002_105066396_105066455_105076524_105076702_105088093
ENSMUSG00000028518.9_0	chr4	-	2987	10	FSM	ENSMUSG00000028518.9	ENST00000371244.9	2995	10	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTTTAAGACATAATTA	NA	NA	NA	NA	NA	NA	NA	NA	104967095	104891223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_104891907_104892743_104893528_104893895_104894023_104896918_104897424_104904287_104904513_104906530_104906619_104908398_104908544_104909112_104909207_104932610_104932753_104966901
ENSMUSG00000028519.17_0	chr4	+	1789	15	FSM	ENSMUSG00000028519.17	ENST00000371231.5	1802	15	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAGATAGCGCAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	104336377	104589356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_104336473_104462494_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266
ENSMUSG00000028519.17_2	chr4	+	1700	14	ISM	ENSMUSG00000028519.17	ENST00000371231.5	1802	15	126122	2	93223	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGCGCAGGTCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	104462492	104589360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_104462635_104470365_104470465_104535898_104536031_104536649_104536770_104537266_104537306_104538794_104538861_104545579_104545640_104570818_104570870_104570960_104571009_104575406_104575470_104577718_104577828_104584756_104585306_104588821_104588950_104589266
ENSMUSG00000028521.18_0	chr4	-	4230	10	FSM	ENSMUSG00000028521.18	ENSMUST00000150285.8	4242	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGTGTTAGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	103072353	103027849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_103030978_103042018_103042102_103062302_103062396_103065306_103065410_103067725_103067795_103068499_103068572_103070361_103070430_103071067_103071155_103071255_103071290_103071860
ENSMUSG00000028522.17_0	chr4	+	4822	15	FSM	ENSMUSG00000028522.17	ENSMUST00000106858.8	4830	15	1	7	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102971592	103022944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102971717_102972756_102972858_102975438_102975513_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUSG00000028522.17_2	chr4	+	4696	15	FSM	ENSMUSG00000028522.17	ENSMUST00000097945.10	4698	15	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102972834	103022944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102972858_102975435_102975513_102984469_102984495_102986537_102986611_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUSG00000028522.17_6	chr4	+	4674	14	ISM	ENSMUSG00000028522.17	ENSMUST00000097945.10	4698	15	2600	2	-1048	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102975434	103022944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_102975513_102984469_102984495_102986537_102986611_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUSG00000028522.17_8	chr4	+	4741	13	FSM	ENSMUSG00000028522.17	ENSMUST00000106857.8	4752	13	6	5	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATACTTGTGTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	102976488	103022944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102976707_102984469_102984495_102988162_102988309_102996554_102996714_102997307_102997441_102998033_102998099_103000330_103000404_103005495_103005648_103006320_103006403_103007730_103007826_103012683_103012812_103016878_103017019_103019619
ENSMUSG00000028524.22_0	chr4	+	2429	18	FSM	ENSMUSG00000028524.22	ENST00000682938.1	2444	18	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTAAACTGTACCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	102617499	102827507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102617763_102710079_102710162_102724836_102724894_102726950_102727006_102727745_102727922_102766004_102766030_102766934_102766987_102768655_102768742_102772255_102772349_102775977_102776053_102778218_102778717_102784657_102784783_102785982_102786110_102791742_102791803_102813295_102813408_102819571_102819728_102821737_102821871_102827253
ENSMUSG00000028524.22_35	chr4	+	1374	12	FSM	ENSMUSG00000028524.22	ENST00000424320.6	1384	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGAGAGCACCTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	102617594	102786249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102617763_102709966_102710162_102724836_102724894_102726950_102727006_102727745_102727922_102766004_102766030_102766934_102766987_102768655_102768742_102772255_102772349_102775977_102776053_102784657_102784783_102785982
ENSMUSG00000028525.17_12	chr4	+	4270	15	NNC	ENSMUSG00000028525.17	novel	4304	15	NA	NA	20	-15	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCATGAATAAATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	102112219	102464441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_102112654_102344406_102344603_102354818_102354856_102354950_102355022_102363189_102363240_102427962_102428076_102448027_102448122_102453130_102453310_102454655_102454755_102454890_102455056_102456839_102456940_102458729_102458885_102458975_102459099_102459783_102459967_102462170
ENSMUSG00000028525.17_2	chr4	+	2718	10	FSM	ENSMUSG00000028525.17	ENSMUST00000097950.9	2756	10	14	24	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	102427305	102463020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_102428076_102448027_102448122_102453130_102453310_102454655_102454755_102454890_102455056_102456839_102456940_102458729_102458885_102458975_102459099_102459783_102459967_102462170
ENSMUSG00000028525.17_3	chr4	+	1374	6	NNC	ENSMUSG00000028525.17	novel	1374	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACATGGCTTTGATCATA	NA	NA	NA	NA	NA	NA	NA	NA	102111939	102413121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_102112654_102344406_102344603_102354818_102354856_102354950_102355022_102363189_102363240_102412815
ENSMUSG00000028530.15_0	chr4	-	4887	25	FSM	ENSMUSG00000028530.15	ENSMUST00000102781.10	4906	25	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACTTCACATGCATATG	NA	NA	NA	NA	NA	NA	NA	NA	101122470	101009573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_101010788_101011734_101011846_101012212_101012331_101013589_101013763_101014148_101014274_101014950_101015144_101016010_101016106_101016211_101016363_101017228_101017381_101019003_101019140_101020045_101020174_101020854_101020943_101021654_101021799_101023739_101023847_101028431_101028619_101031282_101031407_101032270_101032429_101034764_101034954_101036651_101036992_101038976_101039141_101041533_101041688_101046275_101046400_101048671_101048871_101050979_101051061_101122238
ENSMUSG00000028532.15_0	chr4	+	5749	27	FSM	ENSMUSG00000028532.15	ENSMUST00000030257.15	5765	27	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACAGTCGAGGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	100633877	100861731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_100634566_100722178_100722242_100754853_100755003_100775238_100775346_100806269_100806397_100809202_100809348_100810230_100810448_100816646_100816797_100821622_100821857_100823381_100823532_100824142_100824267_100825253_100825372_100828077_100828247_100831202_100831346_100831975_100832158_100833542_100833654_100838167_100838291_100840501_100840602_100840690_100840808_100845278_100845440_100845747_100845835_100846575_100846693_100848020_100848173_100849925_100850088_100851231_100851310_100851931_100852034_100860058
ENSMUSG00000028533.11_0	chr4	-	653	6	FSM	ENSMUSG00000028533.11	ENST00000604921.5	672	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGATATACAAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	92035207	92032895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_92032988_92033217_92033309_92033837_92033919_92034533_92034624_92034768_92034844_92034983
ENSMUSG00000028538.13_12	chr4	-	1656	10	FSM	ENSMUSG00000028538.13	ENST00000647237.1	1678	10	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAACTCAGGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	117964879	117789599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117879960_117880123_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_13	chr4	-	1696	10	FSM	ENSMUSG00000028538.13	ENST00000372374.7	1717	10	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAGAACTCAGGAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	117964880	117789599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117797206_117797354_117797550_117797698_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_22	chr4	-	1022	11	FSM	ENSMUSG00000028538.13	ENST00000372369.5	1035	11	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTGGGCCGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	117964853	117790249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117797206_117797354_117797550_117797608_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_23	chr4	-	581	7	FSM	ENSMUSG00000028538.13	ENST00000528371.5	596	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTGGGCCGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	117964851	117790249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117964745
ENSMUSG00000028538.13_25	chr4	-	671	7	FSM	ENSMUSG00000028538.13	ENST00000531993.6	690	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAGTGGGCCGGACACC	NA	NA	NA	NA	NA	NA	NA	NA	117964847	117790249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117889036_117889080_117964745
ENSMUSG00000028538.13_38	chr4	-	449	6	FSM	ENSMUSG00000028538.13	ENST00000372362.6	465	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTGACTTAAGCAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	117964852	117790270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028538.13_6	chr4	-	1717	9	FSM	ENSMUSG00000028538.13	ENST00000353126.8	1737	9	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATAAAGCTCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	117964880	117789377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117790334_117815624_117815812_117816271_117816368_117817194_117817259_117821526_117821622_117871901_117871995_117889036_117889080_117911846_117911895_117964745
ENSMUSG00000028539.15_0	chr4	-	2168	5	FSM	ENSMUSG00000028539.15	ENSMUST00000070816.9	2177	5	4	5	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTGGTTTGTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	117786956	117783363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117784266_117784357_117784497_117784820_117785340_117786215_117786450_117786582
ENSMUSG00000028540.7_0	chr4	-	2525	6	FSM	ENSMUSG00000028540.7	ENSMUST00000030265.4	2555	6	21	9	21	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAACGAACATTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	117749208	117745848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117746874_117746951_117747129_117747214_117747899_117748091_117748316_117748511_117748625_117748906
ENSMUSG00000028541.15_1	chr4	-	1958	7	FSM	ENSMUSG00000028541.15	ENST00000309519.8	1972	7	6	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGCAGCCCCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117739991	117730336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117739908
ENSMUSG00000028541.15_2	chr4	-	1875	6	ISM	ENSMUSG00000028541.15	ENST00000309519.8	1972	7	1130	8	1130	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGCAGCCCCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117738867	117730336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511
ENSMUSG00000028541.15_4	chr4	-	2617	7	FSM	ENSMUSG00000028541.15	ENST00000356836.10	2634	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAGCAGCCCCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117740045	117730336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117731201_117734076_117734182_117734293_117734417_117734635_117734827_117738064_117738301_117738511_117738868_117739303
ENSMUSG00000028542.18_0	chr4	+	3449	14	FSM	ENSMUSG00000028542.18	ENSMUST00000030269.14	3479	14	29	1	29	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGATGTGCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117692276	117726501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117692675_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_11	chr4	+	3024	13	ISM	ENSMUSG00000028542.18	ENST00000673836.1	3099	14	7399	6	-6178	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTTCTATTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117700217	117726476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_13	chr4	+	2145	13	FSM	ENSMUSG00000028542.18	ENST00000357730.6	2160	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGGAGAAACCCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	117706403	117725452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117706664_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_15	chr4	+	2303	14	FSM	ENSMUSG00000028542.18	ENST00000360584.6	2320	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGGAGAAACCCCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	117706405	117725452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117706668_117712319_117712476_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028542.18_3	chr4	+	3091	14	FSM	ENSMUSG00000028542.18	ENST00000673836.1	3099	14	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAATTTCTATTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117692820	117726476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117692886_117700215_117700333_117713071_117713229_117713886_117714019_117714399_117714671_117720625_117720759_117720885_117721021_117721109_117721214_117721601_117721840_117721950_117722086_117722194_117722295_117722392_117722494_117724955_117725127_117725244
ENSMUSG00000028546.18_0	chr4	-	1735	7	FSM	ENSMUSG00000028546.18	ENST00000651347.1	1775	7	14	26	14	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAACAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	110148100	110063155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_110063857_110066936_110066976_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110147830
ENSMUSG00000028546.18_4	chr4	-	1777	6	FSM	ENSMUSG00000028546.18	ENST00000650764.1	1803	6	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAACAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	110144780	110063155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_110063857_110068622_110068849_110070324_110070479_110083741_110083846_110108477_110108719_110144429
ENSMUSG00000028549.18_0	chr4	-	2787	9	FSM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGAAAACTAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	99717411	99653645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294_99702338_99717319
ENSMUSG00000028549.18_2	chr4	-	2695	8	ISM	ENSMUSG00000028549.18	ENSMUST00000146258.2	2806	9	15086	7	15086	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGAAAACTAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	99702337	99653645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_99655814_99657730_99657779_99668998_99669059_99670113_99670208_99677837_99677917_99686932_99687000_99690333_99690470_99702294
ENSMUSG00000028550.16_0	chr4	+	3145	11	FSM	ENSMUSG00000028550.16	ENSMUST00000030279.15	3178	11	15	18	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATGAAAACATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99082185	99148006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99082690_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUSG00000028550.16_3	chr4	+	2772	11	FSM	ENSMUSG00000028550.16	ENSMUST00000180278.2	2792	11	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACATGAAAACATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	99082389	99148006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99082521_99100813_99100949_99104114_99104199_99106201_99106436_99109428_99109760_99111109_99111181_99112650_99112788_99116792_99116872_99117724_99117802_99123303_99123424_99146633
ENSMUSG00000028551.15_0	chr4	-	1091	2	FSM	ENSMUSG00000028551.15	ENSMUST00000063531.5	1106	2	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGGACCACATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	109522563	109518081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109518824_109522214
ENSMUSG00000028551.15_1	chr4	-	2452	3	FSM	ENSMUSG00000028551.15	ENSMUST00000097921.10	2471	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGGACCACATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	109524376	109518081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109518824_109522214_109522355_109522806
ENSMUSG00000028552.14_0	chr4	+	5171	25	FSM	ENSMUSG00000028552.14	ENSMUST00000102729.10	5190	25	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAAACTTTGTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	109137474	109245005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109137642_109154383_109154426_109161947_109162038_109162873_109162922_109166321_109166418_109169500_109169567_109170074_109170201_109173041_109173102_109178324_109178415_109179266_109179413_109181264_109181422_109186888_109186975_109200480_109200554_109218359_109218522_109218866_109219065_109220375_109220577_109223320_109223438_109223614_109223706_109226141_109226178_109227738_109227876_109230419_109230490_109235461_109235539_109237063_109237227_109239981_109240164_109242515
ENSMUSG00000028555.16_0	chr4	+	2332	18	FSM	ENSMUSG00000028555.16	ENSMUST00000064129.14	2356	18	15	9	-8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTAATATAGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	109264298	109301933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109264407_109273183_109273289_109278489_109278622_109279642_109279720_109280071_109280140_109283497_109283563_109285327_109285428_109286083_109286150_109288052_109288162_109288587_109288656_109288735_109288796_109290185_109290348_109295945_109296038_109297718_109297840_109299423_109299536_109299893_109300009_109300704_109300822_109301278
ENSMUSG00000028556.16_0	chr4	-	7100	49	FSM	ENSMUSG00000028556.16	ENSMUST00000030286.14	7127	49	24	3	24	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACCAGAATCTAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	99009128	98824910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98835001_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98881883_98881974_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ENSMUSG00000028556.16_7	chr4	-	6699	49	FSM	ENSMUSG00000028556.16	ENSMUST00000075836.12	6704	49	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAATTTTAATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	99008999	98825098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752_98977859_99008961
ENSMUSG00000028556.16_8	chr4	-	6642	48	ISM	ENSMUSG00000028556.16	ENSMUST00000075836.12	6704	49	31160	5	31160	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAATTTTAATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	98977839	98825098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_98825538_98829130_98829299_98830826_98830934_98832876_98833021_98833364_98833602_98833721_98833812_98834865_98834992_98842102_98842118_98843552_98843685_98846298_98846443_98847213_98847407_98849573_98849675_98850437_98850597_98854528_98854682_98855459_98855595_98857866_98857964_98859031_98859129_98861363_98861500_98861599_98861783_98864109_98864265_98866100_98866271_98872926_98873067_98875560_98875732_98877239_98877354_98877453_98877595_98879600_98879697_98880605_98880696_98889269_98889440_98891988_98892154_98896168_98896401_98897489_98897577_98903931_98904034_98904863_98905003_98908257_98908329_98911578_98911697_98943558_98943722_98945037_98945132_98949415_98949559_98952186_98952353_98953614_98953696_98958414_98958565_98960641_98960709_98967102_98967189_98967656_98967870_98967956_98968087_98970930_98971000_98971243_98971420_98977752
ENSMUSG00000028557.11_0	chr4	-	4035	3	FSM	ENSMUSG00000028557.11	ENSMUST00000030284.10	4061	3	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAAACAACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	109333860	109308308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109311620_109314094_109314265_109333306
ENSMUSG00000028557.11_1	chr4	-	1944	4	FSM	ENSMUSG00000028557.11	ENSMUST00000064167.8	1955	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGTTAAAAAATGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	109334173	109310099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109311620_109314094_109314265_109333306_109333459_109334071
ENSMUSG00000028558.15_0	chr4	+	2137	9	FSM	ENSMUSG00000028558.15	ENSMUST00000106631.9	2155	9	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGCTTGTCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	109092474	109111766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109092830_109092970_109093073_109095974_109096179_109099353_109099449_109101248_109101459_109101885_109102000_109103344_109103489_109108523_109108617_109110946
ENSMUSG00000028559.18_0	chr4	-	3119	21	FSM	ENSMUSG00000028559.18	ENSMUST00000084366.13	3134	21	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAATGAGACTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	108975209	108918346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUSG00000028559.18_12	chr4	-	2889	24	FSM	ENSMUSG00000028559.18	ENSMUST00000194478.6	2903	24	13	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAACCTGGCAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	109059418	108918812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108965077_108965147_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUSG00000028559.18_15	chr4	-	2591	20	FSM	ENSMUSG00000028559.18	ENSMUST00000160271.8	2604	20	8	5	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	108975225	108918851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108975091
ENSMUSG00000028559.18_16	chr4	-	2865	24	FSM	ENSMUSG00000028559.18	ENSMUST00000030288.14	2871	24	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109059463	108918851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109029470_109029522_109059301
ENSMUSG00000028559.18_21	chr4	-	2758	23	FSM	ENSMUSG00000028559.18	ENSMUST00000160774.8	2765	23	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATGTTTCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	109059407	108918851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108919530_108919661_108919798_108920562_108920655_108921759_108921839_108922820_108922962_108923061_108923126_108923324_108923436_108924111_108924197_108925559_108925732_108929139_108929226_108930010_108930130_108930233_108930347_108940285_108940446_108943523_108943629_108944591_108944683_108948857_108948897_108955699_108955751_108957117_108957148_108958312_108958361_108959693_108959790_108990940_108991018_109013851_109013931_109059301
ENSMUSG00000028560.12_0	chr4	+	3562	9	FSM	ENSMUSG00000028560.12	ENSMUST00000030289.9	3577	9	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCAAATGTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	98812051	98823770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98812481_98814691_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUSG00000028560.12_4	chr4	+	3502	9	FSM	ENSMUSG00000028560.12	ENSMUST00000091358.11	3527	9	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACCAAATGTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	98812130	98823770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98812481_98814672_98814912_98816470_98816592_98817100_98817206_98817930_98818092_98819096_98819786_98820422_98820594_98821060_98821263_98822306
ENSMUSG00000028563.17_0	chr4	-	1011	7	FSM	ENSMUSG00000028563.17	ENSMUST00000102793.11	1027	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACATTTTATTGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	98271534	98243613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_98243918_98246154_98246285_98253799_98253874_98258728_98258821_98263156_98263266_98268854_98268929_98271306
ENSMUSG00000028565.19_0	chr4	+	9496	11	FSM	ENSMUSG00000028565.19	ENSMUST00000075448.13	9526	11	23	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACGGAAGCCGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	97665867	98007101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_97666232_97671318_97671851_97844610_97844677_97888628_97888704_97902449_97902568_97909063_97909192_97929787_97929917_97951249_97951429_97953517_97953684_97969961_97970054_97999454
ENSMUSG00000028567.9_0	chr4	+	1343	7	FSM	ENSMUSG00000028567.9	ENSMUST00000030296.9	1359	7	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGCTATGGTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	108691803	108719314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108692054_108703147_108703209_108710365_108710419_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028567.9_7	chr4	+	1407	5	FSM	ENSMUSG00000028567.9	ENST00000648686.1	1423	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGCTTTATTAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	108705654	108719287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108706110_108713344_108713419_108715121_108715192_108716471_108716556_108718563
ENSMUSG00000028568.17_0	chr4	-	2362	7	FSM	ENSMUSG00000028568.17	ENST00000313334.13	2375	7	5	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTATGGTAGAACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	108690784	108670430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108670482_108672294_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_1	chr4	-	2283	6	ISM	ENSMUSG00000028568.17	ENST00000313334.13	2375	7	3008	8	1347	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTATGGTAGAACAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	108687781	108670430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_108670482_108672294_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714
ENSMUSG00000028568.17_2	chr4	-	3125	6	FSM	ENSMUSG00000028568.17	ENSMUST00000102742.11	3141	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTAAATGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108690801	108671497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108687714_108687781_108690704
ENSMUSG00000028568.17_5	chr4	-	2135	5	FSM	ENSMUSG00000028568.17	ENST00000472944.6	2140	5	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTAATTGTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108690776	108672396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296_108683411_108690704
ENSMUSG00000028568.17_6	chr4	-	2062	4	ISM	ENSMUSG00000028568.17	ENSMUST00000102739.2	723	6	5720	-1633	5720	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTAATTGTTGTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108683408	108672395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_108674084_108675381_108675442_108676332_108676535_108683296
ENSMUSG00000028573.19_0	chr4	+	1872	16	FSM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAACACAACTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95445750	95815164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_95445829_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUSG00000028573.19_5	chr4	+	1877	11	FSM	ENSMUSG00000028573.19	ENSMUST00000043335.11	1910	11	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTACTGCAGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	95467682	95709798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_95467792_95473468_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95709118
ENSMUSG00000028573.19_7	chr4	+	1794	15	ISM	ENSMUSG00000028573.19	ENSMUST00000079223.11	1891	16	27725	12	-12	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAACACAACTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95473468	95815164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_95473685_95485859_95485972_95489201_95489354_95511717_95511807_95585196_95585313_95627025_95627155_95657662_95657767_95688793_95688902_95700344_95700407_95710214_95710363_95725821_95725897_95732309_95732431_95737818_95737914_95811161_95811224_95814959
ENSMUSG00000028576.13_0	chr4	+	1692	14	FSM	ENSMUSG00000028576.13	ENSMUST00000107104.3	1713	14	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTATTTTTTTGTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	94502740	94552927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94552452
ENSMUSG00000028576.13_1	chr4	+	2130	20	FSM	ENSMUSG00000028576.13	ENSMUST00000030311.11	2139	20	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAACTCCTTTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94502734	94581464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94502889_94506203_94506339_94510090_94510227_94512967_94513017_94515213_94515313_94515488_94515550_94520913_94520974_94524010_94524073_94541163_94541303_94543065_94543129_94546743_94546888_94549184_94549226_94550823_94550904_94566501_94566556_94567416_94567515_94568170_94568298_94573858_94574023_94575047_94575174_94579956_94580018_94581187
ENSMUSG00000028577.14_0	chr4	-	2768	14	FSM	ENSMUSG00000028577.14	ENSMUST00000107107.9	2784	14	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGGTTGTGAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94491471	94457409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_94458147_94459923_94460089_94462218_94462321_94463402_94463472_94466623_94466693_94470717_94470938_94471650_94471809_94472069_94472240_94474531_94474668_94474989_94475158_94475517_94475639_94475723_94475825_94478117_94478312_94491113
ENSMUSG00000028578.9_0	chr4	-	2092	6	FSM	ENSMUSG00000028578.9	ENSMUST00000030313.9	2107	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATTACAGATATCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	94445022	94388321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_94389654_94409298_94409373_94437355_94437432_94438658_94438744_94439501_94439703_94444698
ENSMUSG00000028580.16_0	chr4	+	5371	22	FSM	ENSMUSG00000028580.16	ENSMUST00000030315.13	5389	22	10	8	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAATTTGTACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	130390641	130508867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUSG00000028580.16_2	chr4	+	4608	18	FSM	ENSMUSG00000028580.16	ENSMUST00000105991.9	4614	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAATTTGTACTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	130390669	130508867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUSG00000028580.16_3	chr4	+	3995	22	FSM	ENSMUSG00000028580.16	ENSMUST00000097864.9	4017	22	0	22	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAGTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130390696	130507555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471003_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479886_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493361_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUSG00000028580.16_4	chr4	+	3907	22	FSM	ENSMUSG00000028580.16	ENST00000440538.6	3920	22	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAGTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130390712	130507555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130390779_130396235_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479967_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUSG00000028580.16_8	chr4	+	3835	21	ISM	ENSMUSG00000028580.16	ENST00000440538.6	3920	22	5532	10	5525	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAAAGTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	130396241	130507555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_130396610_130428352_130428422_130445464_130445574_130446483_130446663_130455308_130455476_130457588_130457860_130468773_130468868_130471000_130471106_130474288_130474441_130476722_130476862_130478736_130478881_130479967_130480184_130481252_130481490_130490064_130490333_130491375_130491506_130493231_130493367_130496126_130496265_130499182_130499309_130499939_130500062_130501722_130501916_130507082
ENSMUSG00000028581.18_0	chr4	+	1104	6	FSM	ENSMUSG00000028581.18	ENST00000294507.4	1119	6	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGATAAAATCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	130654083	130662358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130654159_130655947_130656078_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUSG00000028581.18_2	chr4	+	1030	5	ISM	ENSMUSG00000028581.18	ENST00000294507.4	1119	6	1866	12	1866	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATGATAAAATCTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	130655946	130662358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_130656078_130656730_130656854_130658081_130658178_130659327_130659421_130661771
ENSMUSG00000028582.15_0	chr4	+	3271	25	FSM	ENSMUSG00000028582.15	ENSMUST00000030320.13	3303	25	10	22	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAGAAAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	108477146	108491298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108477271_108478708_108478792_108480647_108480793_108481640_108481745_108482042_108482202_108482604_108482731_108482851_108483012_108483177_108483351_108483497_108483574_108483676_108483788_108483870_108484002_108484244_108484318_108484490_108484616_108485027_108485146_108485226_108485400_108485779_108485906_108486770_108486830_108486913_108487031_108487288_108487363_108487474_108487534_108487740_108487793_108488792_108488893_108489031_108489123_108490367_108490501_108490719
ENSMUSG00000028583.15_0	chr4	-	1802	6	FSM	ENSMUSG00000028583.15	ENSMUST00000030317.14	1817	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5944	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGAGGCCAACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	143026124	142994005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_142994997_142995757_142995870_142997092_142997132_143000469_143000627_143002640_143002778_143025758
ENSMUSG00000028587.19_0	chr4	+	3000	17	FSM	ENSMUSG00000028587.19	ENSMUST00000102744.4	3014	17	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAAAAGAACTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	108436655	108472021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108436773_108445872_108445979_108447849_108447975_108450489_108450669_108452525_108452842_108454326_108454676_108456519_108456622_108457127_108457282_108459152_108459251_108460584_108460687_108461161_108461334_108461696_108461805_108462724_108462875_108463434_108463555_108469247_108469418_108470265_108470354_108471477
ENSMUSG00000028599.11_0	chr4	-	3799	10	FSM	ENSMUSG00000028599.11	ENSMUST00000030336.11	3818	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATTATTTTTGCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	144973429	144940040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_144942671_144946298_144946507_144949523_144949559_144950072_144950151_144950821_144951055_144951381_144951476_144951899_144952053_144954037_144954167_144955573_144955677_144973293
ENSMUSG00000028599.11_2	chr4	-	545	3	FSM	ENSMUSG00000028599.11	ENST00000376259.7	552	3	3	4	3	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCGAGACCCTGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	144954146	144942326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_144942671_144946298_144946427_144954073
ENSMUSG00000028599.11_3	chr4	-	466	2	ISM	ENSMUSG00000028599.11	ENST00000376259.7	552	3	7723	10	7723	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGACCCCCGAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	144946426	144942332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_144942671_144946298
ENSMUSG00000028601.19_0	chr4	+	1288	10	FSM	ENSMUSG00000028601.19	ENSMUST00000052999.13	1307	10	11	8	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTAGCTTGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	108022644	108036497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108022859_108026911_108026980_108027057_108027146_108029285_108029373_108030076_108030170_108030991_108031049_108031183_108031372_108034269_108034321_108035567_108035616_108036103
ENSMUSG00000028603.16_0	chr4	-	2629	16	FSM	ENSMUSG00000028603.16	ENSMUST00000030340.15	2640	16	9	2	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGGCTTTTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	107975720	107901037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107902043_107904786_107904867_107912635_107912766_107921082_107921186_107928453_107928608_107931552_107931661_107942351_107942500_107944208_107944360_107948433_107948521_107950020_107950085_107955218_107955346_107959487_107959553_107962240_107962373_107964813_107964886_107969423_107969482_107975575
ENSMUSG00000028603.16_17	chr4	-	1259	4	FSM	ENSMUSG00000028603.16	ENST00000408941.7	1282	4	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAATTAAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	107928552	107901065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107902043_107904786_107904867_107921082_107921186_107928453
ENSMUSG00000028607.17_0	chr4	-	2360	5	FSM	ENSMUSG00000028607.17	ENSMUST00000030345.15	2372	5	10	2	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTGGTTCCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	107780797	107761179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107761761_107764117_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUSG00000028607.17_1	chr4	-	2100	5	FSM	ENSMUSG00000028607.17	ENST00000636891.1	2112	5	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACATTGGTGTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	107780687	107761394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107761761_107764052_107765423_107769837_107769945_107771460_107771542_107780511
ENSMUSG00000028608.16_1	chr4	+	2986	8	FSM	ENSMUSG00000028608.16	ENSMUST00000135454.8	2997	8	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAAACAGACCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	107747011	107756572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUSG00000028608.16_4	chr4	+	923	9	FSM	ENSMUSG00000028608.16	ENSMUST00000106727.10	926	9	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGCTGCGTGAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	107747059	107754312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107747094_107747315_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107752747_107752784_107753858
ENSMUSG00000028608.16_7	chr4	+	2895	7	FSM	ENSMUSG00000028608.16	ENSMUST00000125107.8	1551	7	219	-1563	219	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAACAGGTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	107747314	107756562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107754067
ENSMUSG00000028608.16_9	chr4	+	869	8	ISM	ENSMUSG00000028608.16	ENSMUST00000106727.10	926	9	276	3	240	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGCTGCGTGAAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	107747335	107754312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_107747400_107748661_107748719_107749151_107749234_107749418_107749451_107750530_107750609_107752069_107752136_107752747_107752784_107753858
ENSMUSG00000028609.7_0	chr4	+	677	5	FSM	ENSMUSG00000028609.7	ENSMUST00000030348.6	692	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACCTGAATATGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	107736962	107744617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107737143_107738089_107738149_107740264_107740376_107742113_107742197_107744373
ENSMUSG00000028609.7_4	chr4	+	457	4	FSM	ENSMUSG00000028609.7	ENST00000371466.4	472	4	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATCTTTTTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	107737045	107744591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107737143_107738089_107738149_107742113_107742197_107744373
ENSMUSG00000028613.16_0	chr4	+	7374	19	FSM	ENSMUSG00000028613.16	ENSMUST00000106731.4	7391	19	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTGTTTTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107659369	107734029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107704637_107704764_107705477_107705601_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ENSMUSG00000028613.16_2	chr4	+	4540	19	FSM	ENSMUSG00000028613.16	ENSMUST00000030356.10	4555	19	14	1	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATAGAATTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	107659524	107731095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107703435_107703817_107704640_107704764_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ENSMUSG00000028613.16_5	chr4	+	2361	17	FSM	ENSMUSG00000028613.16	ENSMUST00000238421.2	2364	17	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGGCCCACCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	107659611	107729507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107659716_107660447_107660568_107691823_107691947_107700412_107700542_107708504_107708625_107708696_107708823_107711445_107711621_107712774_107713003_107714053_107714173_107714377_107714518_107715818_107715961_107717128_107717282_107718329_107718555_107721205_107721275_107726174_107726348_107727208_107727386_107729469
ENSMUSG00000028614.15_0	chr4	+	4570	18	FSM	ENSMUSG00000028614.15	ENSMUST00000139560.8	4584	18	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAACACTGAATCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	107224988	107273537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107225346_107225953_107226075_107228458_107228561_107231343_107231519_107232274_107232414_107237794_107237904_107238872_107238925_107240781_107240918_107241982_107242076_107243792_107243875_107246647_107246804_107247418_107247659_107247745_107247862_107250339_107250391_107252194_107252259_107252928_107253030_107268262_107268424_107271222
ENSMUSG00000028617.11_0	chr4	-	1745	8	FSM	ENSMUSG00000028617.11	ENSMUST00000030360.11	1755	8	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTTTGAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	107110721	107090712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107091182_107092996_107093082_107096274_107096389_107096908_107096998_107098098_107098218_107100404_107100537_107104490_107104978_107110471
ENSMUSG00000028618.12_0	chr4	+	1762	8	FSM	ENSMUSG00000028618.12	ENSMUST00000030361.11	1775	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6078	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGAGTGTTGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	107035606	107058191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107036115_107042974_107043081_107044815_107044911_107047731_107047885_107049658_107049741_107050495_107050578_107054702_107054812_107057564
ENSMUSG00000028619.16_0	chr4	-	6405	5	FSM	ENSMUSG00000028619.16	ENSMUST00000057043.10	6431	5	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCCAACAAAAATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107035734	106991367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106996997_107004711_107004906_107022744_107022887_107034761_107034902_107035434
ENSMUSG00000028621.18_0	chr4	+	2509	7	FSM	ENSMUSG00000028621.18	ENSMUST00000106758.8	2516	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGGTCAGGACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	106924184	106943016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106924243_106925808_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ENSMUSG00000028621.18_2	chr4	+	2351	5	FSM	ENSMUSG00000028621.18	ENSMUST00000030364.13	2360	5	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATTGGTCAGGACACTT	NA	NA	NA	NA	NA	NA	NA	NA	106925802	106943015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106926021_106928066_106928216_106931069_106931158_106938087_106938292_106941323
ENSMUSG00000028621.18_3	chr4	+	2444	6	ISM	ENSMUSG00000028621.18	ENSMUST00000106758.8	2516	7	1631	7	14	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTGGTCAGGACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	106925815	106943016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_106926021_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ENSMUSG00000028621.18_5	chr4	+	1578	6	FSM	ENSMUSG00000028621.18	ENSMUST00000106756.9	1604	6	23	3	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGCCTCACGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	106927387	106941998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106927745_106928066_106928216_106931069_106931158_106934872_106934978_106938087_106938292_106941323
ENSMUSG00000028622.12_0	chr4	-	1485	7	FSM	ENSMUSG00000028622.12	ENSMUST00000030365.6	1498	7	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCTGTGAGATATTA	NA	NA	NA	NA	NA	NA	NA	NA	106924052	106913070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106913302_106914568_106914773_106917679_106917838_106919079_106919266_106921581_106921698_106921783_106921968_106923646
ENSMUSG00000028629.10_0	chr4	-	1984	2	FSM	ENSMUSG00000028629.10	ENSMUST00000030375.9	1996	2	6	6	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAGTTGACTTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	120782196	120778398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120779894_120781707
ENSMUSG00000028630.10_0	chr10	-	6102	3	FSM	ENSMUSG00000028630.10	ENSMUST00000004281.10	6129	3	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTACATCTCACCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	118705032	118691512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_118697059_118704054_118704204_118704625
ENSMUSG00000028631.8_0	chr4	-	3896	14	FSM	ENSMUSG00000028631.8	ENSMUST00000030376.8	3919	14	15	8	15	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGAAGTGATTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120604430	120553342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120568419_120568582_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ENSMUSG00000028631.8_1	chr4	-	1919	13	FSM	ENSMUSG00000028631.8	ENST00000509682.6	1929	13	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAAGGGCTTCTCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	120604368	120555095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120555304_120555695_120555826_120557088_120557221_120559582_120559683_120561551_120561773_120570208_120570298_120572181_120572278_120572447_120572559_120572962_120573089_120573748_120573925_120574121_120574249_120574654_120574746_120604056
ENSMUSG00000028633.8_0	chr4	-	2689	19	FSM	ENSMUSG00000028633.8	ENSMUST00000030381.8	2705	19	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCATTGGTGTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	120427464	120397071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120397852_120398489_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446_120424625_120427347
ENSMUSG00000028633.8_13	chr4	-	1369	14	FSM	ENSMUSG00000028633.8	ENST00000649215.1	1379	14	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATACTTGATCCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	120416060	120397705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120397852_120398485_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982
ENSMUSG00000028633.8_24	chr4	-	1887	18	FSM	ENSMUSG00000028633.8	ENST00000372616.1	1902	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGGGGAAAAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	120424618	120397754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120397852_120398485_120398579_120399059_120399205_120399727_120399825_120399906_120399963_120400924_120401022_120402214_120402259_120404502_120404566_120405251_120405347_120406660_120406750_120410076_120410210_120411142_120411295_120415475_120415557_120415982_120416067_120418594_120418712_120419974_120420076_120422465_120422637_120424446
ENSMUSG00000028636.15_0	chr4	-	938	3	FSM	ENSMUSG00000028636.15	ENSMUST00000106316.2	954	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAAAGGGCGGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119279566	119275735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119276491_119278776_119278881_119279487
ENSMUSG00000028636.15_1	chr4	-	1427	3	FSM	ENSMUSG00000028636.15	ENSMUST00000030385.13	1443	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAAAGGGCGGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119279610	119275735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119276491_119278776_119278881_119279042
ENSMUSG00000028637.17_0	chr4	-	3882	15	FSM	ENSMUSG00000028637.17	ENSMUST00000238759.2	3909	15	20	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACATTTTTGAGGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	119272698	119179669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119181391_119181737_119181806_119188319_119188435_119188678_119188816_119190776_119190919_119196957_119197071_119206926_119207072_119210266_119210422_119213834_119214045_119216754_119216935_119250738_119250855_119255364_119255437_119258196_119258348_119261270_119261462_119272332
ENSMUSG00000028639.15_0	chr4	-	1609	8	FSM	ENSMUSG00000028639.15	ENSMUST00000079644.13	1628	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	9620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATAATGTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119151791	119135186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119135565_119136130_119136397_119138766_119138850_119139342_119139646_119139977_119140068_119142305_119142340_119150938_119151003_119151400
ENSMUSG00000028641.17_0	chr4	+	3172	15	FSM	ENSMUSG00000028641.17	ENSMUST00000121111.9	3188	15	12	4	-12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTATGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	119090123	119106165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ENSMUSG00000028641.17_2	chr4	+	3178	15	FSM	ENSMUSG00000028641.17	ENSMUST00000030393.13	3188	15	0	10	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAATATGTATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119090135	119106162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119090628_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098858_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ENSMUSG00000028641.17_6	chr4	+	2801	15	FSM	ENSMUSG00000028641.17	ENSMUST00000081606.7	2820	15	14	5	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTATGTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	119091042	119106165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119091176_119092442_119092596_119093973_119094164_119095061_119095194_119095842_119095983_119098313_119098404_119098678_119098732_119098879_119099002_119101218_119101347_119101581_119101678_119102153_119102305_119103831_119103950_119104327_119104404_119104641_119104783_119105087
ENSMUSG00000028642.8_0	chr4	-	546	4	FSM	ENSMUSG00000028642.8	ENST00000536543.5	559	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGTTCAAACACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119071321	119066415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119066615_119067142_119067287_119068071_119068170_119071216
ENSMUSG00000028642.8_1	chr4	-	551	4	ISM	ENSMUSG00000028642.8	ENSMUST00000030394.3	1452	7	4088	4115	3	-8	internal_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGTGAGTTCAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	119071326	119066418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_119066618_119067142_119067287_119068071_119068170_119071216
ENSMUSG00000028643.12_0	chr4	+	714	3	FSM	ENSMUSG00000028643.12	ENSMUST00000030395.9	733	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTTCGTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119052512	119058486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119052684_119053068_119053219_119058093
ENSMUSG00000028643.12_1	chr4	+	674	4	FSM	ENSMUSG00000028643.12	ENSMUST00000106345.3	684	4	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTTCGTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119052604	119058486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119052684_119053068_119053219_119055955_119056008_119058093
ENSMUSG00000028643.12_2	chr4	+	819	3	FSM	ENSMUSG00000028643.12	ENSMUST00000097908.4	832	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTTCGTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119052696	119058486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119052973_119053068_119053219_119058093
ENSMUSG00000028644.18_0	chr4	-	4518	13	FSM	ENSMUSG00000028644.18	ENSMUST00000138395.9	4550	13	32	0	-3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGACTTTTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119047176	119032654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119035924_119037153_119037181_119037269_119037297_119037397_119037419_119038562_119038584_119040039_119040073_119040502_119040536_119041107_119041225_119042737_119043020_119044292_119044632_119044826_119044917_119046055_119046141_119047002
ENSMUSG00000028645.12_0	chr4	+	3234	10	FSM	ENSMUSG00000028645.12	ENSMUST00000030398.10	3260	10	14	12	14	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACCTAAAGGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	118965921	118995168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118966170_118977587_118977684_118989319_118989481_118989639_118989881_118990293_118990457_118990548_118990737_118991051_118991157_118991565_118991668_118992925_118993130_118993442
ENSMUSG00000028646.17_0	chr4	+	2578	7	FSM	ENSMUSG00000028646.17	ENSMUST00000030399.7	2593	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTCAGTGTTTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	123811246	123830783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123811561_123813641_123813846_123814743_123814944_123817752_123817868_123818539_123818683_123823624_123823774_123829330
ENSMUSG00000028647.14_0	chr4	+	1665	5	FSM	ENSMUSG00000028647.14	ENSMUST00000030400.14	1685	5	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTTCTTTCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123798642	123806060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123798881_123799026_123799100_123803426_123803476_123803629_123803760_123804885
ENSMUSG00000028647.14_2	chr4	+	631	4	FSM	ENSMUSG00000028647.14	ENST00000494695.4	633	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTGAGCATAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123798829	123805272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123798881_123799026_123799100_123803639_123803760_123804885
ENSMUSG00000028647.14_5	chr4	+	573	3	ISM	ENSMUSG00000028647.14	ENST00000494695.4	633	4	204	2	204	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCTTGAGCATAGTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123799033	123805272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_123799100_123803639_123803760_123804885
ENSMUSG00000028648.14_0	chr4	-	513	3	FSM	ENSMUSG00000028648.14	ENSMUST00000030401.14	525	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTAGTCTGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123611990	123606509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123606720_123609656_123609875_123611905
ENSMUSG00000028648.14_2	chr4	-	428	2	FSM	ENSMUSG00000028648.14	ENSMUST00000106207.8	680	2	245	7	245	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTAGTCTGTTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123609874	123606509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123606720_123609656
ENSMUSG00000028649.22_0	chr4	-	23472	98	FSM	ENSMUSG00000028649.22	ENSMUST00000097897.11	23495	98	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTACTTAAAAACATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	123578137	123243432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799_123370131_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028649.22_14	chr4	-	17312	93	FSM	ENSMUSG00000028649.22	ENSMUST00000082108.12	17331	93	11	8	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123578142	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028649.22_15	chr4	-	17239	94	FSM	ENSMUSG00000028649.22	ENSMUST00000238731.2	17268	94	21	8	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123458466	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123458255
ENSMUSG00000028649.22_16	chr4	-	23393	98	NIC	ENSMUSG00000028649.22	novel	23398	102	NA	NA	7	-4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123578146	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353188_123354888_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799_123370131_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028649.22_18	chr4	-	17468	94	FSM	ENSMUSG00000028649.22	ENSMUST00000238555.2	17480	94	4	8	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123466849	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123436284_123436381_123438534_123438625_123448096_123448159_123466409
ENSMUSG00000028649.22_19	chr4	-	17293	92	NIC	ENSMUSG00000028649.22	novel	17331	93	NA	NA	18	-4	intron_retention	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123578135	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028649.22_23	chr4	-	17593	88	NNC	ENSMUSG00000028649.22	novel	17608	92	NA	NA	4	-4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123421248	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123259056_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353186_123354881_123355028_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123420256
ENSMUSG00000028649.22_28	chr4	-	23398	98	FSM	ENSMUSG00000028649.22	ENSMUST00000106224.8	23402	98	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACAATGTTTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123578153	123243516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123262613_123262626_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332265_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799_123370131_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028649.22_3	chr4	-	23423	97	NIC	ENSMUSG00000028649.22	novel	23495	98	NA	NA	56	-4	intron_retention	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAAAAACATCATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	123578097	123243429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_123244939_123245614_123245745_123248848_123249061_123254702_123254821_123257849_123257868_123259065_123259141_123260087_123260243_123261667_123261831_123263597_123263762_123264378_123264500_123265564_123265754_123266142_123266287_123268107_123268237_123268524_123268720_123270163_123270324_123270847_123271018_123271890_123272011_123272138_123272346_123272449_123272606_123274207_123274382_123275019_123275149_123275557_123275756_123275894_123276051_123276139_123276314_123276405_123276508_123276899_123277002_123277093_123277217_123278437_123278665_123279247_123279480_123281020_123281225_123282911_123283131_123284316_123284425_123284843_123284964_123287862_123288070_123288798_123289041_123289705_123289791_123291540_123291701_123293135_123293303_123295185_123295357_123295543_123295706_123325790_123327263_123328492_123328989_123332259_123332460_123333233_123333364_123334342_123334585_123335395_123335459_123338627_123338746_123341894_123342052_123343750_123343918_123345825_123346144_123346613_123346823_123348786_123348911_123349150_123349328_123350023_123350543_123351579_123351805_123352946_123353181_123354877_123355028_123357330_123357565_123359148_123359299_123359651_123359868_123363515_123363666_123364799_123370131_123373979_123374116_123377439_123377529_123377819_123377973_123380121_123380221_123380459_123380568_123382121_123382206_123383002_123383166_123384380_123384575_123385486_123385626_123386433_123386613_123386878_123387049_123387727_123387912_123388676_123388804_123391520_123391676_123393665_123393819_123395956_123396083_123396976_123397073_123398237_123398343_123400124_123400287_123401076_123401155_123402205_123402335_123403564_123403842_123404437_123404593_123404738_123404833_123404910_123405039_123405598_123405695_123405839_123405960_123406554_123406662_123406762_123406876_123407627_123407795_123429994_123430088_123433588_123433667_123438534_123438625_123448096_123448159_123577762
ENSMUSG00000028651.13_0	chr4	-	269	2	FSM	ENSMUSG00000028651.13	ENST00000647627.1	278	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACAGAGTTGCCATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	123027153	123016268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123016411_123027026
ENSMUSG00000028651.13_3	chr4	-	1130	9	ISM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	994	1	975	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	123032750	123020908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658
ENSMUSG00000028651.13_4	chr4	-	1187	10	FSM	ENSMUSG00000028651.13	ENSMUST00000030404.5	1188	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCTCCTGCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	123033744	123020908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123021240_123021430_123021574_123024161_123024348_123027026_123027151_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028651.13_8	chr4	-	522	6	ISM	ENSMUSG00000028651.13	ENST00000470213.5	572	7	980	7	980	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGTAAGCACTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	123032745	123024166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_123024348_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658
ENSMUSG00000028651.13_9	chr4	-	565	7	FSM	ENSMUSG00000028651.13	ENST00000470213.5	572	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGTAAGCACTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	123033725	123024166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_123024348_123028847_123028949_123029388_123029471_123030664_123030692_123031318_123031363_123032658_123032758_123033694
ENSMUSG00000028653.17_0	chr4	+	1898	10	FSM	ENSMUSG00000028653.17	ENST00000372818.5	1907	10	9	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGCTGTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	122910397	122948652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_12	chr4	+	2062	11	FSM	ENSMUSG00000028653.17	ENSMUST00000102649.4	2074	11	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCATGCTGCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	122910398	122948739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122910577_122933238_122933380_122937505_122937605_122938283_122938430_122940667_122940811_122942561_122942674_122942944_122943058_122943269_122943348_122945858_122945969_122946276_122946395_122947915
ENSMUSG00000028653.17_31	chr4	+	319	3	FSM	ENSMUSG00000028653.17	ENST00000541099.5	330	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTAGAGTGCAGATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	122910482	122946391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122910577_122945858_122945969_122946276
ENSMUSG00000028653.17_32	chr4	+	228	2	ISM	ENSMUSG00000028653.17	ENST00000541099.5	330	3	35382	2	35382	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGAGTGCAGATGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	122945856	122946392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_122945969_122946276
ENSMUSG00000028654.14_0	chr4	+	3274	3	FSM	ENSMUSG00000028654.14	ENSMUST00000106252.9	3293	3	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTCAAAAAAATGTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	122889743	122896266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122889944_122890306_122890812_122893697
ENSMUSG00000028654.14_1	chr4	+	3485	2	FSM	ENSMUSG00000028654.14	ENSMUST00000030407.8	3501	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAATGTCAGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	122889899	122896270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122890812_122893697
ENSMUSG00000028655.12_0	chr4	-	2124	14	FSM	ENSMUSG00000028655.12	ENSMUST00000030408.12	2151	14	12	15	12	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGAAACACAAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	122854969	122840657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_122841098_122842324_122842502_122842593_122842738_122843059_122843173_122843271_122843356_122843944_122844029_122844206_122844329_122844453_122844545_122844983_122845142_122845581_122845661_122845782_122845922_122850524_122850650_122853062_122853195_122854733
ENSMUSG00000028656.15_0	chr4	-	2752	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106257.10	2768	13	11	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTCACCTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122779838	122752844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779606
ENSMUSG00000028656.15_1	chr4	-	2610	13	FSM	ENSMUSG00000028656.15	ENSMUST00000069533.12	2620	13	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTCACCTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122779699	122752844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766247_122779606
ENSMUSG00000028656.15_2	chr4	-	2728	13	FSM	ENSMUSG00000028656.15	ENSMUST00000106255.8	2737	13	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATTCACCTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122779833	122752844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_122754011_122755726_122755871_122756197_122756281_122756415_122756540_122756693_122756879_122758373_122758552_122758962_122759069_122761277_122761364_122761445_122761590_122763486_122763565_122765189_122765291_122766124_122766250_122779625
ENSMUSG00000028657.15_0	chr4	+	2368	9	FSM	ENSMUSG00000028657.15	ENSMUST00000030412.11	2381	9	8	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATTTTCTGTATAATT	NA	NA	NA	NA	NA	NA	NA	NA	122730042	122752866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_122730173_122737787_122737898_122738210_122738339_122739763_122739835_122742225_122742329_122747383_122747475_122748172_122748272_122749598_122749671_122751302
ENSMUSG00000028664.15_0	chr4	-	4793	16	FSM	ENSMUSG00000028664.15	ENSMUST00000059287.14	4804	16	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATAAAATGACCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	136563266	136380928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_136382742_136383223_136383380_136384713_136384908_136386245_136386396_136386873_136387090_136387962_136388211_136388704_136388828_136399753_136399819_136400573_136400683_136402678_136402845_136411230_136411356_136421045_136421382_136423309_136423466_136498266_136498952_136501890_136501956_136563080
ENSMUSG00000028668.6_0	chr4	-	4683	11	FSM	ENSMUSG00000028668.6	ENSMUST00000030427.6	4708	11	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAAAAAATTCTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	135749063	135730692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135732989_135733481_135733661_135734422_135734535_135735090_135735272_135736356_135736455_135736556_135736713_135737060_135737176_135737539_135738720_135740180_135740288_135741710_135741768_135748861
ENSMUSG00000028669.16_0	chr4	-	1689	6	FSM	ENSMUSG00000028669.16	ENSMUST00000105851.9	1700	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGGTTCAGCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135714564	135702770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135703808_135704459_135704569_135706107_135706213_135713251_135713330_135713702_135713747_135714248
ENSMUSG00000028670.15_0	chr4	-	1612	10	FSM	ENSMUSG00000028670.15	ENSMUST00000067567.5	1626	10	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAGGGCTCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135699931	135695542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135696379_135696454_135696629_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170_135698277_135699828
ENSMUSG00000028670.15_10	chr4	-	782	9	FSM	ENSMUSG00000028670.15	ENST00000374503.7	793	9	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGCGTCCCCAGAGGCG	NA	NA	NA	NA	NA	NA	NA	NA	135698245	135696113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135696379_135696454_135696504_135696738_135696841_135696911_135696986_135697113_135697185_135697269_135697318_135697764_135697831_135697918_135697951_135698170
ENSMUSG00000028671.17_0	chr4	+	1422	11	FSM	ENSMUSG00000028671.17	ENSMUST00000102541.10	1430	11	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGAGGCAGATTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	135691038	135695482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135691100_135692644_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUSG00000028671.17_6	chr4	+	1360	10	FSM	ENSMUSG00000028671.17	ENSMUST00000102540.2	1537	10	170	7	170	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAGAGGCAGATTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	135692645	135695482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135692768_135692876_135692993_135693313_135693428_135693680_135693858_135694123_135694238_135694322_135694390_135694481_135694568_135694662_135694741_135694899_135695015_135695111
ENSMUSG00000028672.14_0	chr4	+	1402	9	FSM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAACATTCAAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	135673765	135689919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135673852_135677860_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028672.14_10	chr4	+	1316	8	ISM	ENSMUSG00000028672.14	ENSMUST00000030432.8	1418	9	4102	9	4102	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAACATTCAAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	135677860	135689919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_135677945_135679681_135679790_135681167_135681264_135682897_135683047_135686033_135686098_135687287_135687477_135688093_135688220_135689419
ENSMUSG00000028673.11_0	chr4	+	2517	8	FSM	ENSMUSG00000028673.11	ENSMUST00000030434.5	2525	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135648053	135667622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135648462_135650277_135650413_135652859_135652998_135657209_135657316_135660209_135660411_135662000_135662192_135664233_135664334_135666384
ENSMUSG00000028675.13_0	chr4	-	1908	3	FSM	ENSMUSG00000028675.13	ENSMUST00000030436.12	1919	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACATTCTTTTTATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	135601151	135598229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135599766_135600205_135600411_135600984
ENSMUSG00000028676.18_0	chr4	+	3032	6	NNC	ENSMUSG00000028676.18	novel	3058	6	NA	NA	8	-19	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAATGAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	135583065	135593107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135591039
ENSMUSG00000028676.18_15	chr4	+	2209	6	NNC	ENSMUSG00000028676.18	novel	2225	6	NA	NA	6	-11	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCACAAATGTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	135583063	135595682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836_135590888_135594436
ENSMUSG00000028676.18_20	chr4	+	3723	6	NNC	ENSMUSG00000028676.18	novel	3754	6	NA	NA	15	-17	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTTTAAAAAAAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	135583072	135597202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590833_135590888_135594436
ENSMUSG00000028676.18_9	chr4	+	3027	6	NNC	ENSMUSG00000028676.18	novel	3055	6	NA	NA	10	-19	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACAAAATGAAGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	135583067	135593107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_135583603_135585615_135585719_135589081_135589189_135590350_135590514_135590836_135590888_135591039
ENSMUSG00000028677.20_0	chr4	-	2881	15	FSM	ENSMUSG00000028677.20	ENST00000372247.6	2896	15	0	15	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTATAAACAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	117354114	117128676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143125_117143170_117146222_117146266_117153328_117153431_117156741_117156788_117164742_117164876_117346785_117347528_117353875
ENSMUSG00000028677.20_8	chr4	-	1913	11	FSM	ENSMUSG00000028677.20	ENSMUST00000221654.2	1949	11	25	11	25	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAACAGTATAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	117146618	117128679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117129573_117130249_117130325_117130443_117130553_117134567_117134647_117134778_117134835_117134939_117135027_117135203_117135301_117142575_117142709_117143047_117143170_117146222_117146266_117146399
ENSMUSG00000028678.14_0	chr4	-	2804	20	FSM	ENSMUSG00000028678.14	ENSMUST00000065896.9	2842	20	13	25	13	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAATAAAGAAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	117039823	117016860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117017580_117019206_117019312_117019409_117019516_117019799_117019868_117022338_117022450_117022554_117022760_117023508_117023652_117024077_117024170_117024245_117024310_117024490_117024582_117027031_117027195_117027281_117027337_117028913_117029010_117029481_117029583_117030798_117030919_117032082_117032206_117035117_117035167_117035341_117035444_117037768_117037864_117039627
ENSMUSG00000028680.15_1	chr4	-	2362	15	FSM	ENSMUSG00000028680.15	ENSMUST00000076859.12	2378	15	12	4	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAAGGCCTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	116991148	116985855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116986376_116986482_116986597_116987156_116987287_116987439_116987603_116987704_116987789_116987920_116988015_116988258_116988351_116988569_116988697_116988806_116989006_116989097_116989194_116989923_116990012_116990101_116990232_116990385_116990503_116990591_116990700_116990848
ENSMUSG00000028683.15_1	chr4	+	1551	12	FSM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	2	2	2	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGCTCAGTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	116876600	116944047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116876674_116879351_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUSG00000028683.15_8	chr4	+	1480	11	ISM	ENSMUSG00000028683.15	ENSMUST00000106448.9	1555	12	2752	1	-1	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGGCTCAGTGGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	116879350	116944048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_116879510_116885607_116885754_116901632_116901793_116909920_116910033_116915960_116916051_116922537_116922666_116923570_116923762_116925940_116926019_116927835_116927985_116938754_116938859_116943885
ENSMUSG00000028684.15_0	chr4	-	1477	10	FSM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCAGCCCGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116851604	116847167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781_116850895_116851527
ENSMUSG00000028684.15_1	chr4	-	1399	9	ISM	ENSMUSG00000028684.15	ENSMUST00000030446.15	1489	10	717	6	-8	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCAGCCCGGCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116850893	116847167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781
ENSMUSG00000028684.15_10	chr4	-	1064	8	FSM	ENSMUSG00000028684.15	ENST00000652287.1	1080	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGAGTCTAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	116850876	116847422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584_116850665_116850781
ENSMUSG00000028684.15_11	chr4	-	1064	8	FSM	ENSMUSG00000028684.15	ENST00000636836.1	1076	8	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGAGTCTAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	116850880	116847422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116847646_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850444_116850508_116850584_116850665_116850781
ENSMUSG00000028684.15_13	chr4	-	971	7	ISM	ENSMUSG00000028684.15	ENST00000652287.1	1080	8	219	7	219	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGGAGTCTAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	116850666	116847422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_116847646_116848428_116848496_116848589_116848691_116848817_116848956_116849760_116849923_116850022_116850221_116850584
ENSMUSG00000028687.18_13	chr4	+	1232	11	FSM	ENSMUSG00000028687.18	ENST00000528013.6	1255	11	13	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAAGGCACCACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116672769	116675225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116672932_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084
ENSMUSG00000028687.18_17	chr4	+	573	5	FSM	ENSMUSG00000028687.18	ENST00000488731.6	581	5	5	3	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116673636	116676627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116673705_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028687.18_24	chr4	+	501	4	ISM	ENSMUSG00000028687.18	ENST00000488731.6	581	5	1238	3	1238	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116674869	116676627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028687.18_8	chr4	+	1464	13	FSM	ENSMUSG00000028687.18	ENST00000372104.5	1472	13	5	3	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTTGGAGAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	116672764	116676627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116672932_116673158_116673233_116673509_116673552_116673632_116673705_116673779_116673894_116673974_116674073_116674151_116674297_116674376_116674432_116674580_116674773_116674865_116675003_116675084_116675235_116675437_116675480_116676451
ENSMUSG00000028688.14_0	chr4	-	2069	8	FSM	ENSMUSG00000028688.14	ENSMUST00000030451.10	2090	8	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTCATTCTTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	116664824	116661206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116662253_116662328_116662492_116662682_116662943_116663181_116663341_116663455_116663553_116663682_116663724_116663813_116663957_116664664
ENSMUSG00000028689.15_0	chr4	+	1510	9	FSM	ENSMUSG00000028689.15	ENSMUST00000030452.13	1524	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCCTGATGTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	116565713	116572290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116566292_116566436_116566471_116566678_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116572036
ENSMUSG00000028689.15_1	chr4	+	1083	9	NIC	ENSMUSG00000028689.15	novel	1112	10	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	116565784	116572300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_+_116565854_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028689.15_2	chr4	+	1111	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106462.9	1112	10	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	116565768	116572300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116565854_116566458_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028689.15_5	chr4	+	1206	10	FSM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	116566133	116572300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116566292_116566436_116566471_116566634_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028689.15_8	chr4	+	1016	8	ISM	ENSMUSG00000028689.15	ENSMUST00000106464.3	1213	10	506	0	506	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTCTCTGTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	116566632	116572300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_116566817_116566920_116567003_116567297_116567482_116568507_116568576_116569568_116569637_116569919_116570024_116571284_116571347_116572036
ENSMUSG00000028690.5_0	chr4	-	2089	4	FSM	ENSMUSG00000028690.5	ENSMUST00000030453.5	2106	4	13	4	13	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCAATCATGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	116565590	116559479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116561065_116561703_116561857_116563077_116563273_116565434
ENSMUSG00000028691.13_0	chr4	+	2282	6	FSM	ENSMUSG00000028691.13	ENSMUST00000135573.8	2294	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	19949	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAGTTCATTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	116542750	116558017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116542858_116544603_116544721_116548972_116549127_116550079_116550203_116550913_116551045_116556367
ENSMUSG00000028692.15_0	chr4	-	1404	9	FSM	ENSMUSG00000028692.15	ENSMUST00000030455.15	1420	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTATACGTTGTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	116508868	116493713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116493867_116494958_116495046_116495172_116495246_116496157_116496358_116497006_116497203_116498187_116498340_116499054_116499175_116502700_116502791_116508535
ENSMUSG00000028693.16_0	chr4	-	2102	14	FSM	ENSMUSG00000028693.16	ENSMUST00000030457.12	2118	14	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAACAAAGCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	116484687	116458257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528
ENSMUSG00000028693.16_6	chr4	-	2512	16	FSM	ENSMUSG00000028693.16	ENSMUST00000030456.14	2520	16	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAACAGCTGAGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116485138	116458813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116458991_116459288_116459418_116459922_116460001_116460084_116460142_116461091_116461259_116461359_116461549_116461937_116462012_116462105_116462192_116462880_116462961_116467599_116468575_116469168_116469279_116471526_116471608_116476066_116476178_116479963_116480012_116484528_116484627_116485086
ENSMUSG00000028696.13_0	chr4	+	2103	9	FSM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	7	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTGCAAAACTTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	116364752	116395424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116364848_116367718_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUSG00000028696.13_1	chr4	+	2094	9	FSM	ENSMUSG00000028696.13	ENSMUST00000030461.5	2115	9	13	8	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTTAGCAACAGTACAA	NA	NA	NA	NA	NA	NA	NA	NA	116364761	116395432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116364848_116367726_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUSG00000028696.13_4	chr4	+	2007	8	ISM	ENSMUSG00000028696.13	ENSMUST00000106479.8	2118	9	2972	10	2969	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTTGCAAAACTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	116367717	116395422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_116368061_116372264_116372697_116377855_116378012_116381382_116381551_116386867_116387006_116387609_116387733_116389754_116389976_116394996
ENSMUSG00000028698.14_0	chr4	+	5244	10	FSM	ENSMUSG00000028698.14	ENSMUST00000030464.14	5257	10	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAAGCATTTTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116078864	116160247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116079611_116113364_116113474_116116741_116116841_116127984_116128166_116129935_116130062_116143252_116143396_116144019_116144197_116148871_116148947_116149293_116149465_116156830
ENSMUSG00000028700.15_0	chr4	+	2869	23	FSM	ENSMUSG00000028700.15	ENST00000371992.1	2877	23	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTATTTTGTAATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	115994482	116017045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115995026_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016264_116016376_116016493_116016754
ENSMUSG00000028700.15_21	chr4	+	2702	22	FSM	ENSMUSG00000028700.15	ENSMUST00000106498.8	2719	22	6	11	-1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAACCTCTGGGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116007720	116017030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116007815_116008261_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116010747_116010866_116011038_116011138_116011288_116011417_116011738_116011810_116012027_116012104_116012259_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028700.15_6	chr4	+	3410	19	FSM	ENSMUSG00000028700.15	ENST00000396420.7	3422	19	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATTTTGTAATAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115994486	116017046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115995026_116008270_116008441_116009016_116009132_116009273_116009393_116009905_116009972_116010059_116010174_116011038_116011138_116011288_116011417_116011738_116012344_116012425_116012468_116012656_116012716_116012925_116012999_116013082_116013212_116013292_116013419_116015089_116015155_116015348_116015394_116015619_116015756_116016179_116016290_116016376
ENSMUSG00000028701.5_0	chr4	-	5710	2	FSM	ENSMUSG00000028701.5	ENSMUST00000030469.5	5742	2	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTGACAAATGCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	116001782	115989610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_115995032_116001493
ENSMUSG00000028702.16_0	chr4	-	2767	19	FSM	ENSMUSG00000028702.16	ENSMUST00000102705.10	2780	19	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGAAGAGGCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	115980879	115954122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258_115980346_115980675
ENSMUSG00000028702.16_1	chr4	-	2993	18	FSM	ENSMUSG00000028702.16	ENSMUST00000102704.4	3025	18	9	23	9	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115980847	115954194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_115954569_115954654_115954819_115955681_115955862_115956136_115956216_115956534_115956659_115956833_115956945_115957464_115957596_115957735_115957811_115959025_115959153_115962954_115963106_115967165_115967291_115967514_115967804_115967883_115967954_115968387_115968524_115969677_115969739_115976034_115976155_115980092_115980180_115980258
ENSMUSG00000028703.15_0	chr4	+	3044	10	FSM	ENSMUSG00000028703.15	ENSMUST00000030471.9	3065	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCATGCAGCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	115932478	115954232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115932805_115936585_115936673_115937745_115937817_115945643_115946767_115950068_115950330_115952073_115952239_115952329_115952429_115952988_115953112_115953339_115953416_115953519
ENSMUSG00000028706.15_0	chr4	-	2424	6	FSM	ENSMUSG00000028706.15	ENSMUST00000030475.3	2439	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGACATCTCCTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	115911065	115890045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_115891509_115892948_115893074_115897265_115897427_115901881_115902037_115905526_115905862_115910880
ENSMUSG00000028708.17_0	chr4	+	2529	13	FSM	ENSMUSG00000028708.17	ENSMUST00000019677.12	2543	13	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGCCTGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115696399	115736438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115696479_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_12	chr4	+	2452	12	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	8985	9	8985	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGCCTGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115705414	115736438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_5	chr4	+	2543	14	FSM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGCCTGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115696429	115736438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115696479_115702818_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028708.17_9	chr4	+	2491	13	ISM	ENSMUSG00000028708.17	ENSMUST00000106513.10	2552	14	6392	9	6392	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTGCCTGTGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115702821	115736438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_115702863_115705416_115705560_115714228_115714331_115717216_115717315_115720173_115720254_115721735_115721810_115723658_115723764_115727507_115727564_115730407_115730504_115731816_115732012_115732577_115732743_115733777_115733822_115735146
ENSMUSG00000028709.4_0	chr4	+	2867	4	FSM	ENSMUSG00000028709.4	ENSMUST00000030477.4	2884	4	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTAAAGCAACCACTG	NA	NA	NA	NA	NA	NA	NA	NA	115685291	115693368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115685439_115688419_115688887_115690829_115691033_115691318
ENSMUSG00000028710.19_0	chr4	+	2285	9	FSM	ENSMUSG00000028710.19	ENSMUST00000176047.8	2330	9	45	0	45	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCCACACCCCCACACAC	NA	NA	NA	NA	NA	NA	NA	NA	115642055	115669511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115642502_115645458_115645568_115647777_115647829_115648419_115648483_115652600_115652652_115653951_115654000_115655162_115655259_115657514_115657623_115668198
ENSMUSG00000028718.17_1	chr4	+	3966	17	FSM	ENSMUSG00000028718.17	ENST00000371877.8	3983	17	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAACTCTTCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114857365	114899153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_114857476_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869078_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ENSMUSG00000028718.17_4	chr4	+	3965	17	NNC	ENSMUSG00000028718.17	novel	3983	17	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAACTCTTCATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114857365	114899153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_114857476_114860044_114860130_114862069_114862178_114863878_114863992_114864332_114864521_114866467_114866716_114867260_114867345_114868990_114869077_114871270_114871422_114873368_114873485_114878671_114878787_114880678_114881615_114887065_114887235_114889839_114890069_114895534_114895728_114896264_114896516_114898370
ENSMUSG00000028719.9_0	chr4	-	3159	6	FSM	ENSMUSG00000028719.9	ENSMUST00000030491.9	3170	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTGGTTCTGATATCTG	NA	NA	NA	NA	NA	NA	NA	NA	114844427	114816532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114826414_114826562_114844162
ENSMUSG00000028719.9_3	chr4	-	916	5	FSM	ENSMUSG00000028719.9	ENST00000450808.2	922	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCACATTTAAAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	114844333	114818534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_114818953_114820261_114820359_114820552_114820630_114822079_114822233_114844162
ENSMUSG00000028729.16_0	chr4	+	997	9	FSM	ENSMUSG00000028729.16	ENST00000431635.6	1012	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTAAGTGAGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	118477943	118482877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118478068_118478120_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719
ENSMUSG00000028729.16_9	chr4	+	2943	9	FSM	ENSMUSG00000028729.16	ENSMUST00000030501.15	2960	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGGTTGGTCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	118478006	118484967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_118478195_118478278_118478363_118478557_118478731_118479266_118479391_118480494_118480585_118480807_118480884_118481331_118481426_118482719_118482883_118483016
ENSMUSG00000028736.14_0	chr4	-	5831	9	FSM	ENSMUSG00000028736.14	ENSMUST00000030508.14	5854	9	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAATTAAAAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	139560833	139464389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_139468214_139476242_139476490_139506886_139507090_139508071_139508238_139511793_139511994_139555886_139556016_139556807_139556938_139557448_139557685_139560137
ENSMUSG00000028737.16_0	chr4	+	3368	15	FSM	ENSMUSG00000028737.16	ENSMUST00000039818.10	3382	15	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACTTATATTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	139350181	139376992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139350509_139361025_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371545_139372289_139372409_139375468
ENSMUSG00000028737.16_1	chr4	+	1618	14	FSM	ENSMUSG00000028737.16	ENST00000375341.8	1629	14	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCAGCACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139361038	139375580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139361120_139361207_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371549_139372291_139372409_139375468
ENSMUSG00000028737.16_6	chr4	+	1538	13	ISM	ENSMUSG00000028737.16	ENST00000375341.8	1629	14	174	5	174	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAGGCCAGCACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139361206	139375580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_139361301_139361974_139362023_139362699_139362856_139364269_139364420_139364496_139364572_139365685_139365874_139367923_139367998_139369387_139369585_139369824_139369873_139370700_139370854_139371422_139371549_139372291_139372409_139375468
ENSMUSG00000028741.14_0	chr4	-	1205	8	FSM	ENSMUSG00000028741.14	ENSMUST00000102503.10	1221	8	10	6	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTTTCTTTTTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	139079877	139074751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_139075117_139075231_139075309_139075631_139075784_139075992_139076061_139076316_139076399_139076924_139077029_139077746_139077806_139079579
ENSMUSG00000028743.8_0	chr4	+	1271	7	FSM	ENSMUSG00000028743.8	ENSMUST00000073787.7	1288	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCAGACCGTCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	139038064	139045730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139038388_139041414_139041603_139041777_139041883_139044020_139044118_139044244_139044345_139044880_139045011_139045402
ENSMUSG00000028744.16_0	chr4	-	1523	9	FSM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	6	3	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139038013	139025841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039_139035162_139037939
ENSMUSG00000028744.16_1	chr4	-	1450	8	ISM	ENSMUSG00000028744.16	ENSMUST00000053862.12	1532	9	2857	3	2814	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139035162	139025841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139034002_139035039
ENSMUSG00000028744.16_3	chr4	-	1401	9	FSM	ENSMUSG00000028744.16	ENSMUST00000172747.8	1405	9	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGGCCTGTTTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139037973	139025841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_139026281_139027536_139027723_139028322_139028416_139028560_139028704_139029100_139029189_139029735_139029866_139033753_139033920_139035039_139035162_139037939
ENSMUSG00000028745.19_0	chr4	+	1658	9	FSM	ENSMUSG00000028745.19	ENSMUST00000102508.10	1674	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCGGCGCTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	138920219	139019123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139018313
ENSMUSG00000028745.19_10	chr4	+	1685	10	FSM	ENSMUSG00000028745.19	ENSMUST00000102507.10	1702	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	138920244	139019062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138920340_138966219_138966310_138984571_138984694_138989294_138989409_139007306_139007449_139007778_139007896_139014339_139014406_139015066_139015144_139016171_139016285_139018313
ENSMUSG00000028751.14_0	chr4	+	840	5	FSM	ENSMUSG00000028751.14	ENSMUST00000030531.14	854	5	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTTCCATTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	138605264	138610126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138605384_138606733_138606808_138607661_138607801_138607980_138608088_138609725
ENSMUSG00000028755.4_0	chr4	-	830	4	FSM	ENSMUSG00000028755.4	ENSMUST00000030535.4	846	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACGTGTTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138095294	138065845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138066312_138070817_138070876_138078494_138078607_138095100
ENSMUSG00000028756.13_0	chr4	-	2359	8	FSM	ENSMUSG00000028756.13	ENSMUST00000030536.13	2375	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCAAAGATGTGTACACT	NA	NA	NA	NA	NA	NA	NA	NA	138053607	138040727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138041525_138042807_138043045_138043314_138043443_138044615_138044780_138045206_138045390_138047299_138047401_138048048_138048334_138053143
ENSMUSG00000028757.5_0	chr4	+	2103	11	FSM	ENSMUSG00000028757.5	ENSMUST00000030538.5	2120	11	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCCTATCAGTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	138032051	138039933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138032350_138032465_138032577_138035553_138035641_138036660_138036765_138036900_138036996_138037494_138037589_138037913_138038063_138038151_138038300_138038720_138038842_138038950_138039058_138039144
ENSMUSG00000028758.13_0	chr4	+	3887	14	FSM	ENSMUSG00000028758.13	ENST00000247986.2	3903	14	16	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAAGCGCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137989563	138029275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015864_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_25	chr4	+	3527	14	FSM	ENSMUSG00000028758.13	ENST00000375044.5	3538	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAAGCGCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137990039	138029275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137990161_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015864_138018679_138018910_138019424_138019657_138021022_138021282_138023502_138023574_138025519_138025638_138028559
ENSMUSG00000028758.13_6	chr4	+	3885	14	FSM	ENSMUSG00000028758.13	ENST00000400463.8	3894	14	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATAAGCGCCCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137989562	138029275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137990045_137996255_137996403_137997156_137997259_138002277_138002468_138005106_138005560_138008667_138008778_138013742_138013897_138015239_138015864_138018679_138018910_138019424_138019657_138021022_138021282_138023505_138023574_138025519_138025638_138028559
ENSMUSG00000028759.14_0	chr4	+	5142	13	FSM	ENSMUSG00000028759.14	ENSMUST00000105827.8	5155	13	6	7	6	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAACTTGGCTTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	137943612	137971987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953364_137955958_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_10	chr4	+	3100	12	FSM	ENSMUSG00000028759.14	ENSMUST00000097836.10	3113	12	7	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAAAGTTTCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	137943944	137970475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137944052_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_25	chr4	+	3343	13	FSM	ENSMUSG00000028759.14	ENSMUST00000165861.8	3361	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAAAGTTTCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	137944453	137970475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137944606_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_6	chr4	+	3288	13	FSM	ENSMUSG00000028759.14	ENSMUST00000030541.13	3311	13	17	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAAAGTTTCCAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	137943954	137970475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137944052_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953360_137955954_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028759.14_9	chr4	+	3338	13	FSM	ENSMUSG00000028759.14	ENSMUST00000105826.8	3348	13	4	6	4	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTGCTGAACTACAGC	NA	NA	NA	NA	NA	NA	NA	NA	137943941	137970453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137944111_137948836_137949035_137949399_137949500_137950800_137950961_137953199_137953364_137955958_137956099_137956990_137957069_137957674_137957827_137961553_137961645_137964458_137964619_137966847_137966960_137967931_137968049_137968756
ENSMUSG00000028760.17_1	chr4	+	8113	34	FSM	ENSMUSG00000028760.17	ENSMUST00000084215.12	8134	34	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	137720353	137935819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ENSMUSG00000028760.17_20	chr4	+	5264	34	FSM	ENSMUSG00000028760.17	ENST00000634879.2	5286	34	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATAACTAATACTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	137720834	137933454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137720939_137721292_137721456_137772653_137772730_137785259_137785389_137810203_137810300_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847659_137847766_137853120_137853946_137873595_137873685_137878892_137879140_137883922_137884057_137885701_137885822_137890757_137890929_137893043_137893242_137897787_137897935_137898365_137898603_137899883_137899989_137903158_137903292_137904248_137904344_137905227_137905322_137907800_137907919_137910438_137910657_137911962_137912079_137915356_137915530_137917925_137918052_137919277_137919360_137921354_137921454_137925389_137925537_137929231_137929314_137930655_137930803_137933283
ENSMUSG00000028760.17_35	chr4	+	1794	10	FSM	ENSMUSG00000028760.17	ENST00000356916.7	1806	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACACTAAATGCCGCC	NA	NA	NA	NA	NA	NA	NA	NA	137785266	137854136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137785389_137810203_137810300_137814843_137814877_137824062_137824243_137824555_137824671_137830625_137830724_137832624_137832748_137847656_137847766_137853120_137853946_137854043
ENSMUSG00000028763.19_0	chr4	+	14180	97	FSM	ENSMUSG00000028763.19	ENSMUST00000030547.15	14187	97	6	1	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTCCTGTTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	137196085	137297940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267523_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275802_137276842_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ENSMUSG00000028763.19_5	chr4	+	14171	97	FSM	ENSMUSG00000028763.19	ENSMUST00000171332.2	14176	97	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTCTCCTGTTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	137196118	137297940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137196236_137228369_137228506_137229586_137229632_137235111_137235222_137235320_137235380_137235614_137235776_137237852_137237982_137238217_137238473_137238556_137238677_137239152_137239285_137239413_137239559_137239649_137239802_137239940_137240088_137241921_137242086_137242604_137242785_137242868_137243066_137243170_137243319_137244086_137244215_137244511_137244599_137244675_137244735_137244893_137244962_137245693_137245835_137245943_137246121_137246226_137246407_137246496_137246616_137246976_137247089_137247192_137247307_137247397_137247526_137247820_137247908_137248753_137248804_137249049_137249145_137249343_137249485_137249769_137249962_137256115_137256209_137256473_137256555_137256653_137256885_137258934_137259049_137260742_137260871_137260975_137261063_137262434_137262494_137262651_137262817_137262930_137263042_137265495_137265597_137265681_137265863_137266412_137266539_137266611_137266765_137266847_137266991_137267281_137267418_137267505_137267661_137267969_137268121_137268718_137268865_137268951_137269088_137269541_137269694_137269822_137269959_137270049_137270202_137270834_137270965_137271152_137271305_137271675_137271815_137271898_137272051_137272588_137272725_137272829_137272982_137273865_137274005_137275331_137275484_137275656_137275814_137276848_137276989_137277289_137277432_137277651_137277804_137278115_137278258_137278374_137278516_137279102_137279238_137279405_137279588_137280089_137280286_137280485_137280666_137280906_137281168_137282399_137282605_137283950_137284049_137284484_137284752_137286123_137286234_137286400_137286549_137286624_137286742_137287723_137287827_137288990_137289136_137289217_137289318_137289472_137289583_137289692_137289802_137291301_137291401_137291655_137291878_137292080_137292326_137292639_137292812_137292927_137293051_137293144_137293202_137295437_137295514_137295611_137295691_137295845_137295914_137296072_137296157_137296571_137296676_137296802
ENSMUSG00000028766.11_0	chr4	-	2071	9	FSM	ENSMUSG00000028766.11	ENST00000539907.5	2094	9	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCCAAATATTTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	137483051	137469065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_137470014_137470495_137470616_137470945_137471138_137473703_137473839_137475069_137475140_137476859_137477004_137479862_137480039_137481178_137481354_137482940
ENSMUSG00000028771.14_0	chr5	-	3258	18	FSM	ENSMUSG00000028771.14	ENSMUST00000030556.8	3280	18	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGCTACATATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	21260896	21191651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21192493_21194004_21194107_21196391_21196423_21197706_21197775_21198227_21198297_21202780_21203755_21206269_21206356_21207420_21207517_21207614_21207693_21210346_21210414_21214439_21214583_21216682_21216743_21219691_21219764_21220708_21220748_21224210_21224307_21227015_21227093_21234773_21234883_21260646
ENSMUSG00000028772.20_0	chr4	-	2101	8	FSM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAGGAACTGGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130253732	130209183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928_130248050_130253668
ENSMUSG00000028772.20_1	chr4	-	2033	7	ISM	ENSMUSG00000028772.20	ENSMUST00000134159.3	2113	8	5691	8	-1	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAGGAACTGGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130248045	130209183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_130210602_130220985_130221132_130223366_130223468_130230870_130230963_130232276_130232378_130243057_130243116_130247928
ENSMUSG00000028772.20_4	chr4	-	917	5	FSM	ENSMUSG00000028772.20	ENST00000616859.4	933	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGAGCCTGGCCGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	130248035	130210122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130210602_130230870_130230963_130232276_130232378_130243057_130243151_130247883
ENSMUSG00000028772.20_6	chr4	-	1035	6	FSM	ENSMUSG00000028772.20	ENST00000627541.1	1040	6	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGGGTGCTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	130243115	130210142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130210602_130220985_130221132_130223288_130223468_130230870_130230963_130232276_130232378_130243057
ENSMUSG00000028772.20_7	chr4	-	972	5	ISM	ENSMUSG00000028772.20	ENST00000627541.1	1040	6	10744	4	10744	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCCGGGTGCTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	130232372	130210142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_130210602_130220985_130221132_130223288_130223468_130230870_130230963_130232276
ENSMUSG00000028773.9_0	chr4	+	809	4	FSM	ENSMUSG00000028773.9	ENSMUST00000070532.8	823	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTTGTCTGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130202396	130209251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130202644_130206083_130206257_130207746_130207849_130208964
ENSMUSG00000028776.15_0	chr4	-	1942	12	FSM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	3	7	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATTACAGTGTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	130068592	130059401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685_130068001_130068515
ENSMUSG00000028776.15_1	chr4	-	1865	11	ISM	ENSMUSG00000028776.15	ENSMUST00000105999.9	1952	12	596	6	586	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTACAGTGTCTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	130067999	130059400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130063103_130063197_130066724_130066789_130067685
ENSMUSG00000028776.15_3	chr4	-	1831	11	FSM	ENSMUSG00000028776.15	ENSMUST00000175992.8	1847	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATAATTACAGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	130068577	130059404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130059999_130060095_130060142_130060694_130060819_130061048_130061095_130061197_130061388_130061490_130061642_130061722_130061847_130062811_130062927_130066724_130066789_130067685_130068001_130068515
ENSMUSG00000028778.16_0	chr4	-	1143	7	FSM	ENSMUSG00000028778.16	ENST00000373705.1	1155	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAATGGAGCCCGAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	130031415	130019572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_130019631_130026422_130026549_130027487_130027715_130029062_130029179_130029457_130029702_130030904_130031084_130031222
ENSMUSG00000028779.17_0	chr4	+	1903	6	FSM	ENSMUSG00000028779.17	ENSMUST00000118199.8	1915	6	8	4	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACTTCTTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	129996358	130021924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129996521_130001155_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028779.17_1	chr4	+	1543	5	FSM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACTTCTTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130001353	130021924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130001444_130014960_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028779.17_2	chr4	+	1456	4	ISM	ENSMUSG00000028779.17	ENSMUST00000030563.6	1551	5	13609	3	13609	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACTTCTTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	130014957	130021924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_130015235_130018855_130019012_130019446_130019591_130021045
ENSMUSG00000028780.14_0	chr5	+	5462	18	FSM	ENSMUSG00000028780.14	ENSMUST00000030568.14	5491	18	26	3	26	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTCTTTCACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	17779304	17935263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_17779964_17781827_17781969_17858705_17858867_17860000_17860064_17867917_17868038_17875447_17875539_17877426_17877547_17880039_17880183_17881308_17881424_17883309_17883380_17886936_17887082_17899640_17899864_17916383_17916473_17919408_17919451_17921908_17922067_17926851_17926920_17929078_17929210_17932340
ENSMUSG00000028788.15_0	chr4	+	3629	6	FSM	ENSMUSG00000028788.15	ENSMUST00000030578.14	3646	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTTTTTGTGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	129714024	129743765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129714395_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUSG00000028788.15_16	chr4	+	3287	5	ISM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	18268	5	-558	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTAAACAGTTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	129732768	129743791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUSG00000028788.15_19	chr4	+	532	4	FSM	ENSMUSG00000028788.15	ENST00000470404.5	550	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGATTGAGAAGAAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	129733336	129741735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129733472_129736462_129736556_129740257_129740333_129741506
ENSMUSG00000028788.15_8	chr4	+	3371	6	FSM	ENSMUSG00000028788.15	ENSMUST00000165853.2	3382	6	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTAAACAGTTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	129714506	129743791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129714593_129732770_129733472_129736462_129736556_129738854_129738986_129740257_129740333_129741506
ENSMUSG00000028789.17_0	chr4	-	2032	11	FSM	ENSMUSG00000028789.17	ENSMUST00000106068.8	2049	11	17	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128856204	128825814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856093
ENSMUSG00000028789.17_1	chr4	-	2053	11	FSM	ENSMUSG00000028789.17	ENSMUST00000030581.10	2063	11	10	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAAACCCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	128856222	128825814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128826285_128828249_128828465_128839849_128839963_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855998_128856093
ENSMUSG00000028789.17_13	chr4	-	1429	9	FSM	ENSMUSG00000028789.17	ENST00000373441.1	1443	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGAGCGGGCCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128855252	128826151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128826285_128828249_128828465_128839849_128840026_128841251_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155
ENSMUSG00000028789.17_9	chr4	-	2033	11	FSM	ENSMUSG00000028789.17	ENST00000373443.7	2040	11	7	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTAAACCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	128856214	128825818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128826285_128828249_128828465_128839849_128839948_128841245_128841412_128842584_128842751_128843382_128843518_128844392_128844566_128853576_128853751_128855155_128855353_128855876_128855995_128856089
ENSMUSG00000028790.14_0	chr4	-	3720	9	FSM	ENSMUSG00000028790.14	ENSMUST00000066257.6	3738	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGCTGTAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129636079	129607619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129621347_129621465_129623993_129624119_129635571
ENSMUSG00000028790.14_4	chr4	-	1201	8	FSM	ENSMUSG00000028790.14	ENST00000492989.1	1215	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTAAAAACAAACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	129635945	129609887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129609980_129612875_129612935_129613831_129613900_129614444_129614647_129616437_129616572_129619368_129619516_129623993_129624119_129635571
ENSMUSG00000028792.15_0	chr4	+	972	6	FSM	ENSMUSG00000028792.15	ENSMUST00000030583.13	986	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGCAGCACTCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	128887027	128902191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826
ENSMUSG00000028792.15_1	chr4	+	1761	7	FSM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTATCCCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	128887026	128905312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128887230_128892926_128893053_128895943_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUSG00000028792.15_7	chr4	+	751	5	ISM	ENSMUSG00000028792.15	ENSMUST00000102604.11	1781	7	8933	685	8	-685	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCAGATAAGGAGACATGG	NA	NA	NA	NA	NA	NA	NA	NA	128895949	128904637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_128896055_128896166_128896262_128901505_128901579_128901826_128902023_128904355
ENSMUSG00000028793.16_0	chr4	+	2571	9	FSM	ENSMUSG00000028793.16	ENST00000356990.9	2585	9	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGACCTCATGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	128952073	128978311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977463
ENSMUSG00000028793.16_3	chr4	+	2504	9	FSM	ENSMUSG00000028793.16	ENSMUST00000168461.8	2532	9	20	8	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGACCTCATGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	128952083	128978311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128952690_128965529_128965736_128967294_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ENSMUSG00000028793.16_4	chr4	+	2379	10	FSM	ENSMUSG00000028793.16	ENSMUST00000030584.11	2414	10	25	10	25	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGGAACCTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	128952088	128979518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520_128978013_128979342
ENSMUSG00000028793.16_6	chr4	+	1979	9	FSM	ENSMUSG00000028793.16	ENSMUST00000097874.9	1992	9	5	8	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTGACCTCATGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	128952611	128978311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128952690_128965529_128965736_128967291_128967437_128969362_128969526_128969954_128970070_128972699_128972841_128974134_128974343_128976539_128976672_128977520
ENSMUSG00000028795.16_0	chr4	-	854	6	FSM	ENSMUSG00000028795.16	ENSMUST00000030586.15	879	6	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAACAGAAAAGCGACT	NA	NA	NA	NA	NA	NA	NA	NA	129517733	129513084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129513240_129514249_129514273_129514475_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUSG00000028795.16_2	chr4	-	801	4	FSM	ENSMUSG00000028795.16	ENSMUST00000106035.8	821	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAAGATCTTAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	129517657	129514274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129514670_129514776_129514944_129516392_129516581_129517606
ENSMUSG00000028795.16_3	chr4	-	754	3	ISM	ENSMUSG00000028795.16	ENSMUST00000106035.8	821	4	1087	6	1087	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGGAAGATCTTAGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	129516584	129514274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_129514670_129514776_129514944_129516392
ENSMUSG00000028796.18_0	chr4	+	3937	15	FSM	ENSMUSG00000028796.18	ENSMUST00000030588.13	3949	15	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128548506	128646674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128548610_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028796.18_1	chr4	+	3882	15	FSM	ENSMUSG00000028796.18	ENSMUST00000106080.8	3885	15	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128582590	128646674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128582639_128598790_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028796.18_2	chr4	+	3824	14	ISM	ENSMUSG00000028796.18	ENSMUST00000106080.8	3885	15	16213	0	16213	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128598800	128646674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_128599028_128601729_128601889_128602769_128602848_128603291_128603457_128604850_128604938_128605851_128606153_128616701_128617094_128617340_128617507_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028796.18_3	chr4	+	2525	7	FSM	ENSMUSG00000028796.18	ENSMUST00000106079.10	2535	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTTTCTCCCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	128621387	128646674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_128621664_128637146_128637350_128638794_128638925_128639582_128639698_128640893_128641036_128641800_128642078_128645292
ENSMUSG00000028797.21_1	chr4	+	1425	5	FSM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGCAAACAAAGCTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	129494472	129502309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129494525_129494775_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028797.21_6	chr4	+	1364	4	ISM	ENSMUSG00000028797.21	ENSMUST00000102591.10	1437	5	312	12	301	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGCAAACAAAGCTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	129494784	129502309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_129494928_129495987_129496055_129500879_129500973_129501248
ENSMUSG00000028798.17_0	chr4	-	1057	10	ISM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	154	4	8	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTTTGTGCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	129494287	129485756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201
ENSMUSG00000028798.17_1	chr4	-	1119	11	FSM	ENSMUSG00000028798.17	ENSMUST00000102593.11	1123	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTTTGTGCAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	129494441	129485756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494386
ENSMUSG00000028798.17_10	chr4	-	1026	8	FSM	ENSMUSG00000028798.17	ENST00000677540.1	1035	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGGGTCTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	129494289	129485847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129486153_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201
ENSMUSG00000028798.17_12	chr4	-	803	9	FSM	ENSMUSG00000028798.17	ENST00000678968.1	812	9	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGGGTCTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	129494289	129485847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129489093_129489207_129490666_129490733_129492747_129492836_129494201
ENSMUSG00000028798.17_14	chr4	-	536	6	FSM	ENSMUSG00000028798.17	ENST00000679290.1	545	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGGGTCTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	129494289	129485847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129494201
ENSMUSG00000028798.17_18	chr4	-	1132	11	FSM	ENSMUSG00000028798.17	ENST00000677772.1	1149	11	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTCTGGGTCTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	129494923	129485849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129489056_129489207_129490666_129490733_129492747_129492836_129494201_129494295_129494762
ENSMUSG00000028798.17_8	chr4	-	819	9	FSM	ENSMUSG00000028798.17	ENST00000677353.1	827	9	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTGGGTCTCCATCCA	NA	NA	NA	NA	NA	NA	NA	NA	129494290	129485847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129485928_129486059_129486153_129486789_129486864_129487134_129487225_129487318_129487430_129488851_129488980_129490666_129490733_129492747_129492836_129494201
ENSMUSG00000028799.16_0	chr4	-	2796	9	FSM	ENSMUSG00000028799.16	ENSMUST00000106072.9	2812	9	0	16	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGAAAAGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	128699838	128666896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643_128688770_128699804
ENSMUSG00000028799.16_1	chr4	-	2671	8	FSM	ENSMUSG00000028799.16	ENSMUST00000071108.14	2674	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAGAGAAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128688681	128666899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042_128684107_128688643
ENSMUSG00000028799.16_2	chr4	-	2624	7	ISM	ENSMUSG00000028799.16	ENSMUST00000071108.14	2674	8	4584	3	4584	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAAGAGAAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	128684097	128666899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_128668431_128670876_128671036_128671160_128671240_128679762_128679988_128680685_128681014_128683656_128683904_128684042
ENSMUSG00000028800.16_0	chr4	-	2022	14	FSM	ENSMUSG00000028800.16	ENSMUST00000102597.5	2038	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1978	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTCGGCCCTGGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	129436496	129409902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129410430_129410692_129410742_129411148_129411302_129411585_129411717_129411805_129411915_129412623_129412765_129412844_129412954_129415210_129415304_129416155_129416298_129416755_129416895_129418038_129418114_129422719_129422838_129428406_129428520_129436373
ENSMUSG00000028803.19_0	chr4	-	2624	12	FSM	ENSMUSG00000028803.19	ENSMUST00000105856.9	2624	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	135221817	135173447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ENSMUSG00000028803.19_3	chr4	-	2536	11	ISM	ENSMUSG00000028803.19	ENSMUST00000105856.9	2624	12	3235	0	3235	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	135218582	135173447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_135174717_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243
ENSMUSG00000028803.19_4	chr4	-	5128	12	FSM	ENSMUSG00000028803.19	ENSMUST00000102549.10	5153	12	22	3	22	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTCGGGTCCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135221912	135176205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135179884_135191096_135191192_135192998_135193063_135194157_135194247_135195816_135195953_135199195_135199293_135201634_135201781_135204743_135204804_135206846_135207019_135209782_135209852_135218243_135218594_135221740
ENSMUSG00000028807.3_0	chr4	-	2299	5	FSM	ENSMUSG00000028807.3	ENSMUST00000030610.3	2321	5	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAAGACAATCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129271899	129247432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129248298_129251497_129251668_129253690_129254494_129263021_129263116_129271532
ENSMUSG00000028809.17_0	chr4	-	3777	17	FSM	ENSMUSG00000028809.17	ENSMUST00000105861.8	3797	17	7	13	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGAACATTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	135080625	135047807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUSG00000028809.17_1	chr4	-	3725	18	FSM	ENSMUSG00000028809.17	ENSMUST00000084846.12	3740	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAGAACATTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	135080546	135047807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067919_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUSG00000028809.17_7	chr4	-	3130	18	FSM	ENSMUSG00000028809.17	ENSMUST00000136342.9	3152	18	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGGGGTTTGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	135080539	135048410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135048766_135049600_135049811_135051224_135051421_135052129_135052592_135054402_135054535_135056314_135056357_135056683_135056829_135059031_135059119_135059468_135059550_135065114_135065390_135067813_135067934_135068157_135068347_135069680_135069885_135071174_135071291_135071809_135071981_135074045_135074169_135074425_135074516_135080407
ENSMUSG00000028811.13_0	chr4	+	2899	13	FSM	ENSMUSG00000028811.13	ENSMUST00000106054.4	2909	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAACACAGCTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	129083562	129113400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129083866_129090622_129090770_129090905_129091082_129094518_129094649_129099921_129100003_129101733_129101827_129103444_129103581_129104285_129104372_129107741_129107878_129108450_129108549_129109018_129109213_129110470_129110613_129112223
ENSMUSG00000028820.14_0	chr4	+	3452	10	FSM	ENSMUSG00000028820.14	ENSMUST00000030623.8	3465	10	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGATTTCTTCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126915128	126925028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126916014_126916608_126916798_126917059_126917362_126917466_126917563_126919647_126919845_126919935_126920021_126920561_126920680_126921060_126921110_126921189_126921312_126923619
ENSMUSG00000028821.9_0	chr4	+	1359	7	FSM	ENSMUSG00000028821.9	ENSMUST00000030622.3	1369	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTGTCTGTAACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	134658216	134664857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134658330_134658490_134658596_134661766_134661893_134662242_134662361_134662684_134662776_134663293_134663393_134664150
ENSMUSG00000028822.12_0	chr4	-	1192	7	FSM	ENSMUSG00000028822.12	ENSMUST00000030626.12	1204	7	9	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTCTTTCTCGTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	134642326	134625162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134625788_134628010_134628072_134630960_134631054_134632654_134632723_134636923_134637037_134640401_134640507_134642199
ENSMUSG00000028825.8_0	chr4	+	1490	10	FSM	ENSMUSG00000028825.8	ENSMUST00000030627.8	1514	10	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTATCCACAAGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	134591863	134623476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134592057_134603625_134603813_134607200_134607352_134611324_134611488_134611829_134611994_134612560_134612699_134617612_134617741_134619533_134619614_134621644_134621719_134623264
ENSMUSG00000028826.15_0	chr4	-	3809	11	FSM	ENSMUSG00000028826.15	ENSMUST00000030628.15	3826	11	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATAAAACTAGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134580649	134530079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134531876_134533827_134534003_134536910_134537032_134538446_134538630_134539850_134540010_134555317_134555820_134557859_134558039_134560508_134560633_134563633_134563761_134565159_134565302_134580348
ENSMUSG00000028830.15_0	chr4	+	4369	21	FSM	ENSMUSG00000028830.15	ENSMUST00000047431.11	4384	21	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGTGCCTGGCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	126647570	126748122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126647789_126650691_126650862_126685567_126686089_126708048_126708296_126710165_126710268_126717436_126717535_126722593_126722682_126724122_126724216_126725882_126726016_126729263_126729493_126730427_126730552_126731079_126731213_126733391_126733541_126734438_126734591_126734898_126735038_126736268_126736429_126740150_126740294_126740933_126741057_126741569_126741661_126742603_126742696_126746958
ENSMUSG00000028832.12_0	chr4	+	1046	5	FSM	ENSMUSG00000028832.12	ENSMUST00000030636.11	1060	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTCTTTCTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	134195639	134201149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134195741_134197413_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUSG00000028832.12_7	chr4	+	948	4	FSM	ENSMUSG00000028832.12	ENSMUST00000105868.2	967	4	358	-339	358	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACTTCTTTCTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	134197410	134201149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134197487_134197977_134198151_134200114_134200307_134200642
ENSMUSG00000028833.14_0	chr4	-	3665	7	FSM	ENSMUSG00000028833.14	ENSMUST00000030637.14	3681	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCCTTTGTGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	126647193	126637549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126639065_126640338_126640482_126640888_126641114_126642270_126642513_126643677_126644647_126645733_126645875_126646763
ENSMUSG00000028837.9_0	chr4	+	842	6	FSM	ENSMUSG00000028837.9	ENSMUST00000030642.3	859	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGATCTTTCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	126571432	126603500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126571639_126577914_126578038_126580821_126580893_126599850_126600014_126601346_126601397_126603271
ENSMUSG00000028840.11_0	chr4	-	1981	3	FSM	ENSMUSG00000028840.11	ENSMUST00000030644.8	1994	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATTTTGTTATCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	133972894	133970603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133972242_133972335_133972399_133972614
ENSMUSG00000028841.15_0	chr4	-	2443	21	FSM	ENSMUSG00000028841.15	ENSMUST00000030645.9	2468	21	18	7	18	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGAACCCATGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	133965692	133955358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133955896_133956249_133956432_133956516_133956602_133956692_133956755_133956896_133956974_133957490_133957563_133957722_133957797_133959351_133959525_133959948_133959980_133960057_133960165_133960304_133960364_133960450_133960513_133960596_133960699_133961012_133961076_133961178_133961239_133961799_133961905_133961980_133962023_133962419_133962505_133963181_133963364_133963470_133963629_133965567
ENSMUSG00000028842.16_0	chr4	-	15565	19	FSM	ENSMUSG00000028842.16	ENSMUST00000069097.13	15595	19	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAAGTGCTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	126323327	126226532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ENSMUSG00000028842.16_26	chr4	-	661	5	ISM	ENSMUSG00000028842.16	ENST00000397828.3	730	6	11930	7	11930	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAGATAGAGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126311189	126286328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020
ENSMUSG00000028842.16_27	chr4	-	722	6	FSM	ENSMUSG00000028842.16	ENST00000397828.3	730	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAGATAGAGGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	126323118	126286328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126286354_126296957_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ENSMUSG00000028842.16_3	chr4	-	3006	17	FSM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACACATATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	126323118	126238624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997_126298207_126311020_126311193_126323060
ENSMUSG00000028842.16_31	chr4	-	695	5	ISM	ENSMUSG00000028842.16	ENST00000397828.3	730	6	3	10636	3	-10636	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGGGAACTAAAACCATA	NA	NA	NA	NA	NA	NA	NA	NA	126323116	126296957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_126297095_126297997_126298207_126301534_126301656_126311020_126311193_126323060
ENSMUSG00000028842.16_5	chr4	-	2945	16	ISM	ENSMUSG00000028842.16	ENST00000246314.10	3012	17	11930	5	11930	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTCACACATATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	126311189	126238624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_126239376_126240423_126240624_126241560_126241663_126243978_126244114_126244647_126244843_126247473_126247565_126248798_126248959_126257438_126257624_126261440_126261575_126262276_126262400_126264055_126264176_126265260_126265409_126265531_126265620_126270699_126270835_126297997_126298207_126311020
ENSMUSG00000028843.9_0	chr4	-	730	3	FSM	ENSMUSG00000028843.9	ENSMUST00000030651.9	743	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTGTGGTGTCCGGGT	NA	NA	NA	NA	NA	NA	NA	NA	133856088	133854717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133855118_133855228_133855397_133855926
ENSMUSG00000028845.16_0	chr4	-	1462	10	FSM	ENSMUSG00000028845.16	ENSMUST00000030658.13	1492	10	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGGCTCTTTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	126218962	126215915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595_126218802_126218926
ENSMUSG00000028845.16_1	chr4	-	1397	9	ISM	ENSMUSG00000028845.16	ENSMUST00000030658.13	1492	10	220	0	220	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCAGGCTCTTTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	126218772	126215915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_126216213_126216364_126216445_126216612_126216757_126216912_126217021_126217149_126217265_126217431_126217576_126218022_126218229_126218386_126218513_126218595
ENSMUSG00000028847.9_0	chr4	+	1318	5	FSM	ENSMUSG00000028847.9	ENSMUST00000030660.9	1336	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAATCCTGTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126156127	126169668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126156331_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUSG00000028847.9_10	chr4	+	403	4	FSM	ENSMUSG00000028847.9	ENST00000373159.1	405	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGGAAAACAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126156282	126167757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126156331_126166470_126166569_126166767_126166909_126167641
ENSMUSG00000028847.9_11	chr4	+	862	5	FSM	ENSMUSG00000028847.9	ENST00000373163.5	875	5	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAGAGAGCTCAAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	126156291	126169301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126156406_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUSG00000028847.9_12	chr4	+	916	5	FSM	ENSMUSG00000028847.9	ENST00000373162.5	939	5	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGAGCAGACTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	126156296	126169193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126156573_126166470_126166569_126166767_126166868_126167682_126167866_126168934
ENSMUSG00000028847.9_34	chr4	+	349	3	ISM	ENSMUSG00000028847.9	ENST00000373159.1	405	4	10194	2	10194	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTGGAAAACAACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126166476	126167757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_126166569_126166767_126166909_126167641
ENSMUSG00000028847.9_7	chr4	+	1090	3	FSM	ENSMUSG00000028847.9	ENST00000616074.4	1105	3	11	4	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTGTCCTGTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126156163	126169674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126156331_126167682_126167866_126168934
ENSMUSG00000028848.14_0	chr4	+	1352	5	FSM	ENSMUSG00000028848.14	ENSMUST00000030661.14	1367	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACGTTTTTTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	133311683	133319042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133312181_133313220_133313378_133315810_133315972_133317077_133317209_133318636
ENSMUSG00000028849.18_0	chr4	-	3354	17	FSM	ENSMUSG00000028849.18	ENST00000474796.2	3367	17	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126150106	126125962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_1	chr4	-	3181	17	FSM	ENSMUSG00000028849.18	ENSMUST00000106132.3	3195	17	11	3	-8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126150125	126125962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126133824_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_2	chr4	-	3159	18	FSM	ENSMUSG00000028849.18	ENST00000373150.8	3172	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126150007	126125962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128288_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_3	chr4	-	3238	18	FSM	ENSMUSG00000028849.18	ENSMUST00000122129.8	3249	18	8	3	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126150062	126125962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126130853_126130948_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028849.18_4	chr4	-	3344	17	FSM	ENSMUSG00000028849.18	ENSMUST00000061143.15	3351	17	4	3	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTACGTGTCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126150072	126125962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126126560_126126660_126126855_126126968_126127060_126127157_126127201_126127385_126127440_126127685_126127791_126127890_126128030_126128115_126128312_126128559_126128889_126130425_126130566_126130688_126131072_126132314_126132426_126133815_126133931_126134506_126134671_126135573_126135643_126135809_126136161_126149809
ENSMUSG00000028850.3_0	chr4	+	1987	7	FSM	ENSMUSG00000028850.3	ENSMUST00000030662.3	2004	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGATCTGCCTTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	133302067	133311549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133302522_133305217_133305646_133307096_133307272_133307961_133308022_133309782_133309905_133310292_133310421_133310929
ENSMUSG00000028851.7_0	chr4	-	1303	8	FSM	ENSMUSG00000028851.7	ENSMUST00000030665.7	1316	8	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCCTCGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	133273295	133259853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133260111_133260505_133260625_133260716_133260801_133261538_133261854_133262820_133262887_133262978_133263183_133268449_133268528_133273115
ENSMUSG00000028854.10_0	chr4	+	4648	12	FSM	ENSMUSG00000028854.10	ENSMUST00000030669.8	4676	12	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTCCAGGGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133097038	133151007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133098219_133139147_133139609_133142611_133142863_133143591_133143810_133145210_133145414_133146764_133146855_133147235_133147307_133147412_133147587_133147815_133147931_133148096_133148199_133148812_133148886_133149297
ENSMUSG00000028857.17_0	chr4	-	1465	6	FSM	ENSMUSG00000028857.17	ENSMUST00000105907.9	1484	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTAAGTGGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	133005092	132993363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132994233_132995506_132995638_132995719_132995817_132997088_132997121_132998273_132998359_133004841
ENSMUSG00000028860.14_0	chr4	-	1934	15	FSM	ENSMUSG00000028860.14	ENSMUST00000030674.8	1951	15	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGACTGCTTAACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	132990412	132980405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983352_132983512_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985133_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
ENSMUSG00000028860.14_1	chr4	-	1727	14	FSM	ENSMUSG00000028860.14	ENSMUST00000105908.10	1730	14	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTGCTTAACTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	132990398	132980403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132980620_132980765_132980972_132982843_132982944_132983044_132983124_132983798_132983896_132984175_132984343_132984446_132984561_132984727_132984823_132985044_132985097_132986171_132986218_132986292_132986369_132986598_132986748_132988163_132988393_132990297
ENSMUSG00000028861.14_0	chr4	+	927	8	FSM	ENSMUSG00000028861.14	ENSMUST00000030675.8	937	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAATGATGGAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	125940727	125949325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125940993_125941226_125941272_125942427_125942507_125944272_125944322_125945117_125945203_125947292_125947352_125948753_125948946_125949172
ENSMUSG00000028862.7_0	chr4	+	4313	29	FSM	ENSMUSG00000028862.7	ENSMUST00000030677.7	4334	29	17	4	17	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGCTTGTCTTGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	132968145	132980236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132968743_132970128_132970269_132970363_132970388_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ENSMUSG00000028862.7_2	chr4	+	3958	28	FSM	ENSMUSG00000028862.7	ENST00000374040.7	3976	28	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCTGTCCTAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	132968350	132980110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132968743_132970128_132970269_132970621_132970813_132970985_132971155_132972292_132972400_132972816_132972988_132973088_132973202_132973568_132973729_132973940_132974104_132974185_132974294_132974390_132974441_132974512_132974609_132974724_132974813_132974891_132975026_132975323_132975452_132975698_132975836_132976102_132976209_132976972_132977131_132977240_132977434_132977518_132977658_132977959_132978117_132978234_132978412_132978652_132978759_132978921_132979085_132979169_132979283_132979365_132979440_132979710_132979788_132979962
ENSMUSG00000028863.14_0	chr4	+	4529	7	FSM	ENSMUSG00000028863.14	ENSMUST00000154689.8	4550	7	13	8	-4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAAGAAACTGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124978939	125007023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125002115_125002150_125003091
ENSMUSG00000028863.14_10	chr4	+	652	8	FSM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATCAGCCAGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	124978974	125002151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001309_125001340_125001444_125001503_125002115
ENSMUSG00000028863.14_16	chr4	+	1117	7	ISM	ENSMUSG00000028863.14	ENST00000373075.6	1221	8	982	0	967	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTCTTGATTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	124979936	125003700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001309_125001340_125002115_125002150_125003091
ENSMUSG00000028863.14_17	chr4	+	568	7	ISM	ENSMUSG00000028863.14	ENST00000448519.2	666	8	967	9	967	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATCAGCCAGACAACTT	NA	NA	NA	NA	NA	NA	NA	NA	124979936	125002151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001309_125001340_125001444_125001503_125002115
ENSMUSG00000028863.14_2	chr4	+	855	6	FSM	ENSMUSG00000028863.14	ENSMUST00000055213.11	872	6	11	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAAATGGGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124978954	125003676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125003369
ENSMUSG00000028863.14_6	chr4	+	1215	8	FSM	ENSMUSG00000028863.14	ENST00000373075.6	1221	8	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTTCTTGATTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	124978960	125003700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124979060_124979937_124980054_124983667_124983756_124983894_124983941_124996631_124996825_125001309_125001340_125002115_125002150_125003091
ENSMUSG00000028864.8_0	chr5	+	3443	19	FSM	ENSMUSG00000028864.8	ENSMUST00000199581.5	3468	19	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAATACTTTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	16758564	16825142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16758643_16758898_16759017_16765956_16766123_16769784_16769898_16771744_16771860_16777489_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819889_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_1	chr5	+	2617	18	FSM	ENSMUSG00000028864.8	ENSMUST00000030683.8	2642	18	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCACTCTATGCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16758800	16824296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16759017_16765956_16766123_16769784_16769898_16771744_16771860_16777489_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819889_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028864.8_3	chr5	+	2647	18	FSM	ENSMUSG00000028864.8	ENST00000457544.7	2666	18	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCCATATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	16758877	16824426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16759017_16765956_16766123_16769784_16769898_16771744_16771860_16777504_16777633_16781906_16782028_16783440_16783560_16798841_16799017_16803132_16803261_16807280_16807384_16809785_16809920_16815103_16815143_16816817_16816915_16818753_16818829_16819897_16820037_16820501_16820609_16820727_16820874_16823823
ENSMUSG00000028868.14_0	chr4	+	5626	9	FSM	ENSMUSG00000028868.14	ENSMUST00000084241.12	5642	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCTTTGGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	132857826	132927062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132858040_132903751_132903924_132912279_132912415_132912909_132913064_132916388_132916507_132917439_132917571_132919415_132919572_132921706_132922219_132923027
ENSMUSG00000028869.14_0	chr4	+	2343	16	FSM	ENSMUSG00000028869.14	ENSMUST00000030684.8	2366	16	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATGCCATTAGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	124923796	124949158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124923988_124928030_124928116_124929007_124929103_124931314_124931455_124934729_124934915_124936406_124936474_124937357_124937517_124938016_124938131_124940038_124940168_124941295_124941401_124942139_124942299_124942472_124942587_124946196_124946649_124947247_124947328_124947934_124948021_124948976
ENSMUSG00000028871.8_0	chr4	+	1811	6	FSM	ENSMUSG00000028871.8	ENSMUST00000030687.8	1834	6	3	20	3	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAAGAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	124880225	124902872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124880465_124884885_124885220_124898774_124898967_124900939_124901090_124901376_124901566_124902165
ENSMUSG00000028873.17_0	chr4	-	1611	10	FSM	ENSMUSG00000028873.17	ENSMUST00000084296.10	1626	10	10	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTCCTCGGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	124830700	124812262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817626_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_12	chr4	-	820	10	FSM	ENSMUSG00000028873.17	ENST00000373055.6	830	10	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGGACGGGCCGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	124830478	124812796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817591_124820457_124820531_124824864_124824906_124830147_124830277_124830381
ENSMUSG00000028873.17_14	chr4	-	911	11	FSM	ENSMUSG00000028873.17	ENST00000327331.2	925	11	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACGGACGGGCCGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	124830694	124812796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124812824_124813405_124813493_124814051_124814179_124815004_124815098_124815792_124815858_124817509_124817591_124820457_124820531_124824864_124824906_124830147_124830277_124830381_124830485_124830609
ENSMUSG00000028878.12_0	chr4	-	3033	9	FSM	ENSMUSG00000028878.12	ENSMUST00000030696.11	3053	9	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGATGCATGTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	132649856	132626530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132648037_132648103_132649668
ENSMUSG00000028878.12_8	chr4	-	1570	7	FSM	ENSMUSG00000028878.12	ENST00000419687.6	1583	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGGGCAGAAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	132649825	132627722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132640979_132641138_132645032_132645088_132648037_132648103_132649668
ENSMUSG00000028878.12_9	chr4	-	999	10	FSM	ENSMUSG00000028878.12	ENST00000010299.10	1010	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGTGAGGAGGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	132649754	132628533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132628620_132629313_132629416_132631208_132631345_132638002_132638090_132640979_132641138_132643429_132643583_132645032_132645088_132646693_132646738_132648010_132648103_132649668
ENSMUSG00000028879.5_0	chr4	-	2918	9	FSM	ENSMUSG00000028879.5	ENSMUST00000030698.5	2934	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACCTGTGTTGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	132611809	132580816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132582870_132584610_132584694_132585729_132585803_132587854_132587961_132590136_132590181_132590469_132590608_132595478_132595579_132598898_132598969_132611558
ENSMUSG00000028882.14_0	chr4	-	2364	7	FSM	ENSMUSG00000028882.14	ENST00000373931.8	2374	7	10	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2769	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTCTTGAGTCTTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	132570427	132554233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132555518_132556683_132556749_132557935_132558081_132560207_132560429_132561947_132562102_132567954_132568016_132569993
ENSMUSG00000028883.20_0	chr5	+	4041	18	FSM	ENSMUSG00000028883.20	ENSMUST00000095012.11	4085	18	26	18	26	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATAAGATAACACAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	13446776	13650938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_13447050_13449842_13450037_13501070_13501229_13505510_13505574_13523365_13523486_13566170_13566265_13573020_13573141_13606494_13606638_13606976_13607092_13607231_13607302_13611730_13611876_13615717_13615938_13620113_13620206_13627555_13627598_13630959_13631118_13635036_13635105_13647467_13647611_13649115
ENSMUSG00000028883.20_3	chr5	+	5914	17	FSM	ENSMUSG00000028883.20	ENSMUST00000030714.9	5930	17	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTTGAATTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	13449285	13652527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_13450037_13501070_13501229_13505510_13505574_13523365_13523486_13566170_13566265_13573020_13573141_13606494_13606638_13606976_13607092_13607231_13607302_13611730_13611876_13615717_13615938_13620113_13620206_13627555_13627598_13630959_13631118_13635036_13635105_13647467_13647611_13649115
ENSMUSG00000028884.15_0	chr4	+	1790	9	FSM	ENSMUSG00000028884.15	ENSMUST00000102561.11	1813	9	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAAAACTGTCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	132495658	132506053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132495778_132495990_132496098_132497856_132497959_132499151_132499266_132501137_132501213_132502327_132502445_132503558_132503667_132503963_132504059_132505100
ENSMUSG00000028885.9_0	chr4	-	1986	8	FSM	ENSMUSG00000028885.9	ENSMUST00000030709.9	2006	8	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGCAACCGTGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	132484550	132460283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132461071_132465329_132465464_132465547_132465729_132466939_132467113_132468698_132468843_132472398_132472497_132473788_132474003_132484295
ENSMUSG00000028885.9_5	chr4	-	791	5	FSM	ENSMUSG00000028885.9	ENST00000549094.1	804	5	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTAGGAGTTTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132473996	132465332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132465464_132465547_132465729_132466939_132467113_132472398_132472497_132473788
ENSMUSG00000028886.16_0	chr4	+	2375	17	FSM	ENSMUSG00000028886.16	ENST00000436342.6	2388	17	7	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCGTGACTGGACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	132366361	132449234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_15	chr4	+	5146	17	FSM	ENSMUSG00000028886.16	ENSMUST00000081726.13	5160	17	11	3	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGGTTTTCTCCTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	132366367	132452073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420457_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_29	chr4	+	2342	17	FSM	ENSMUSG00000028886.16	ENST00000373871.8	2355	17	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCCGTGACTGGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	132384010	132449233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132408066_132408205_132417015_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028886.16_6	chr4	+	2314	17	FSM	ENSMUSG00000028886.16	ENST00000540618.5	2330	17	8	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTCCGTGACTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	132366362	132449232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132366467_132384003_132384100_132389205_132389250_132394465_132394546_132397499_132397567_132400206_132400344_132417015_132417102_132420272_132420461_132422057_132422195_132426340_132426425_132428331_132428422_132431662_132431722_132434273_132434435_132437255_132437371_132439152_132439275_132446522_132446624_132448589
ENSMUSG00000028889.18_0	chr4	+	1614	5	FSM	ENSMUSG00000028889.18	ENSMUST00000102628.11	1634	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACAGTTGTAAATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	124744484	124749028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124744960_124745485_124745601_124745692_124745813_124747666_124747810_124748267
ENSMUSG00000028890.14_0	chr4	+	7541	12	FSM	ENSMUSG00000028890.14	ENSMUST00000106193.8	7554	12	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAATCTGGTAGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	124695902	124743165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124695997_124696097_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ENSMUSG00000028890.14_1	chr4	+	7609	11	FSM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGTTGGTCACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	124696357	124743587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124696437_124698452_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ENSMUSG00000028890.14_3	chr4	+	7532	10	ISM	ENSMUSG00000028890.14	ENSMUST00000030723.3	7631	11	2109	6	2109	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGAGTTGGTCACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	124698450	124743587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_124698909_124713997_124714237_124715020_124715153_124718079_124718154_124718838_124718976_124724911_124724990_124731490_124731594_124732111_124732711_124736320_124736385_124737939
ENSMUSG00000028893.9_0	chr4	-	3469	10	FSM	ENSMUSG00000028893.9	ENSMUST00000030724.9	3475	10	5	1	5	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTTGCTAATGGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	132237807	132219343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132221114_132221774_132221920_132224195_132224387_132224682_132224802_132225263_132225415_132226247_132226461_132226555_132226739_132227076_132227275_132229873_132229940_132237374
ENSMUSG00000028894.19_0	chr4	+	3801	24	FSM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	0	8	0	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGACTATGGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	124635642	124695296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124635710_124636256_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ENSMUSG00000028894.19_4	chr4	+	3734	23	ISM	ENSMUSG00000028894.19	ENSMUST00000094782.10	3809	24	614	8	614	-8	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTGACTATGGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	124636256	124695296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_124636384_124636728_124636824_124637428_124637527_124637666_124637697_124639864_124639976_124645104_124645486_124671133_124671231_124674163_124674332_124676182_124676285_124677680_124677796_124678103_124678221_124678965_124679154_124680310_124680423_124681264_124681375_124682861_124682998_124685298_124685410_124685985_124686149_124686966_124687203_124689148_124689263_124691617_124691703_124692044_124692173_124693560_124693673_124694498
ENSMUSG00000028896.14_0	chr4	-	2268	10	FSM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	10	7	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132073048	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132072956
ENSMUSG00000028896.14_1	chr4	-	2178	9	ISM	ENSMUSG00000028896.14	ENSMUST00000084250.11	2285	10	5739	7	5697	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132067319	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235
ENSMUSG00000028896.14_2	chr4	-	2287	10	ISM	ENSMUSG00000028896.14	ENSMUST00000105951.8	2326	11	3526	3	-2363	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132075421	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310
ENSMUSG00000028896.14_3	chr4	-	2275	11	FSM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132073016	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235_132067318_132072956
ENSMUSG00000028896.14_4	chr4	-	2214	10	ISM	ENSMUSG00000028896.14	ENSMUST00000030726.13	2278	11	5700	3	5700	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132067316	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132066513_132066553_132067235
ENSMUSG00000028896.14_5	chr4	-	2323	11	FSM	ENSMUSG00000028896.14	ENSMUST00000105951.8	2326	11	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGGCTTTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	132078947	132059236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132060314_132061417_132061571_132061795_132061916_132062055_132062212_132062729_132062853_132063027_132063125_132065041_132065222_132065361_132065550_132067235_132067318_132075310_132075432_132078921
ENSMUSG00000028898.16_0	chr4	-	1120	9	FSM	ENSMUSG00000028898.16	ENSMUST00000030730.14	1130	9	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	132056841	132039075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132046765_132046886_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUSG00000028898.16_1	chr4	-	941	8	FSM	ENSMUSG00000028898.16	ENSMUST00000105962.10	961	8	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGCTTCTTCAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	132056782	132039075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132039318_132041303_132041338_132041515_132041679_132048989_132049122_132052518_132052572_132053256_132053357_132055779_132055878_132056663
ENSMUSG00000028899.12_0	chr4	+	3772	6	FSM	ENSMUSG00000028899.12	ENSMUST00000030731.11	3787	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGATAGACTTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	132001695	132023072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132001799_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028899.12_5	chr4	+	1245	7	FSM	ENSMUSG00000028899.12	ENST00000495422.2	1256	7	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACAGGCAGTGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	132001717	132020482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132001799_132009304_132009390_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028899.12_9	chr4	+	1334	6	FSM	ENSMUSG00000028899.12	ENST00000263974.4	1348	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAATTGAAGACACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132001792	132020394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132002136_132010104_132010357_132012354_132012433_132016625_132016741_132019173_132019263_132019937
ENSMUSG00000028901.14_5	chr4	-	1919	10	FSM	ENSMUSG00000028901.14	ENSMUST00000105964.2	1925	10	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	131988907	131952981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973380_131978985_131979144_131988801
ENSMUSG00000028901.14_6	chr4	-	1903	10	FSM	ENSMUSG00000028901.14	ENST00000294409.2	1905	10	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAACAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	131988863	131952982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973409_131978985_131979144_131988801
ENSMUSG00000028901.14_7	chr4	-	1838	9	ISM	ENSMUSG00000028901.14	ENST00000294409.2	1905	10	9725	0	23	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAAAAAAAAACAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	131979140	131952982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_131953774_131955182_131955306_131958296_131958435_131959322_131959455_131962059_131962218_131964421_131964526_131969635_131969761_131973296_131973409_131978985
ENSMUSG00000028902.5_0	chr4	+	1805	17	FSM	ENSMUSG00000028902.5	ENSMUST00000030734.5	1820	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAGTTTATGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	124608577	124626247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618976_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028902.5_9	chr4	+	1500	17	FSM	ENSMUSG00000028902.5	ENST00000528675.1	1507	17	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTCGGTTCCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	124608694	124626055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124608784_124609061_124609110_124609444_124609498_124609602_124609709_124610243_124610317_124612120_124612213_124615816_124615900_124616670_124616810_124617463_124617533_124618551_124618620_124618867_124618980_124620771_124620842_124621866_124622032_124622111_124622223_124623251_124623343_124625163_124625220_124625980
ENSMUSG00000028906.18_40	chr4	-	4026	17	FSM	ENSMUSG00000028906.18	ENST00000644780.1	4049	17	12	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAGGGATTGCAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	131776397	131679708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131681505_131682838_131682890_131684953_131685131_131690234_131690298_131691239_131691282_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131734268_131734750_131776181
ENSMUSG00000028906.18_72	chr4	-	3858	15	FSM	ENSMUSG00000028906.18	ENST00000646189.1	3870	15	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGCTAGATTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	131802615	131679821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131681532_131682838_131682890_131684953_131685131_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734733_131802512
ENSMUSG00000028906.18_73	chr4	-	4093	17	FSM	ENSMUSG00000028906.18	ENST00000650265.1	4105	17	6	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGGCTAGATTTTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	131776403	131679821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131681532_131682838_131682890_131684953_131685131_131691239_131691282_131691441_131691499_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731106_131734268_131734750_131776181
ENSMUSG00000028906.18_8	chr4	-	2535	18	FSM	ENSMUSG00000028906.18	ENST00000373800.7	2542	18	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGGTGTTCCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	131802595	131653816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131653920_131655802_131655884_131663049_131663179_131684953_131685131_131690234_131690298_131695098_131695287_131701994_131702168_131702848_131702947_131706120_131706274_131709763_131709852_131717025_131717245_131718521_131718598_131724809_131724853_131727510_131727616_131730895_131731102_131733348_131733435_131734268_131734733_131802512
ENSMUSG00000028907.8_0	chr4	-	1580	8	FSM	ENSMUSG00000028907.8	ENSMUST00000030738.8	1603	8	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAGAAAGTAAAATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	124587380	124571962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124572780_124573494_124573606_124575985_124576117_124576205_124576300_124577027_124577142_124577545_124577649_124579881_124579944_124587232
ENSMUSG00000028909.18_0	chr4	-	5256	29	FSM	ENSMUSG00000028909.18	ENST00000428026.6	5274	29	10	8	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCACCCTGTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	131551267	131495774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131496872_131497063_131497200_131498477_131498636_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507394_131507484_131508140_131508178_131514618_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142
ENSMUSG00000028909.18_11	chr4	-	5136	29	FSM	ENSMUSG00000028909.18	ENST00000460170.2	5149	29	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCCCATTTCGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	131551271	131495905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131496872_131497063_131497200_131498477_131498630_131498757_131498884_131499814_131499956_131501517_131501692_131503515_131503666_131504092_131504229_131506333_131506489_131507173_131507291_131507385_131507484_131508140_131508178_131514614_131514696_131515076_131515153_131515685_131515877_131520828_131520987_131525163_131525303_131526022_131526060_131526828_131527103_131529838_131529942_131530253_131530456_131530689_131530800_131535522_131535832_131546104_131546399_131546839_131547015_131547272_131547389_131547492_131547575_131548018_131548291_131551142
ENSMUSG00000028910.13_0	chr4	+	1316	10	FSM	ENSMUSG00000028910.13	ENSMUST00000030742.11	1337	10	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAGTACAGTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	131570791	131595087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_131570990_131581026_131581125_131581895_131582028_131585067_131585212_131588071_131588175_131589086_131589190_131590228_131590303_131592367_131592429_131592566_131592640_131594757
ENSMUSG00000028911.17_0	chr4	+	2241	6	FSM	ENSMUSG00000028911.17	ENSMUST00000053819.6	2257	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTTCACCGCGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	131600937	131629011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_131601182_131618517_131618661_131619391_131619505_131624967_131625183_131627372_131627463_131627575
ENSMUSG00000028914.14_0	chr4	+	3882	9	FSM	ENSMUSG00000028914.14	ENSMUST00000030747.11	3897	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCTCCCATGTTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	141520930	141543280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141521298_141523745_141524146_141531131_141531167_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517_141539628_141540905
ENSMUSG00000028914.14_3	chr4	+	1022	7	FSM	ENSMUSG00000028914.14	ENST00000375890.8	1035	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGAGCACTTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141523751	141539624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141523917_141524012_141524168_141532672_141532850_141533140_141533231_141534425_141534574_141538849_141539030_141539517
ENSMUSG00000028917.15_0	chr4	-	4075	19	ISM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	781	1	0	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTCGCTGACCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	141391429	141353045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171
ENSMUSG00000028917.15_1	chr4	-	4152	20	FSM	ENSMUSG00000028917.15	ENSMUST00000030751.5	4154	20	0	2	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGTCGCTGACCCTC	NA	NA	NA	NA	NA	NA	NA	NA	141392210	141353046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141354019_141355061_141355179_141355259_141355440_141355591_141355752_141356391_141356458_141356760_141356952_141357220_141357354_141357882_141357972_141358302_141358368_141358600_141358692_141358820_141358891_141359023_141359888_141361563_141361790_141366986_141367174_141368727_141368816_141369305_141369406_141369716_141369827_141369960_141370068_141391171_141391439_141392141
ENSMUSG00000028919.12_0	chr4	+	2548	15	FSM	ENSMUSG00000028919.12	ENST00000270747.8	2557	15	8	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACCTGCCTGATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140970183	140984176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140970322_140973485_140973921_140974259_140974637_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ENSMUSG00000028919.12_1	chr4	+	3396	17	FSM	ENSMUSG00000028919.12	ENSMUST00000006618.9	3414	17	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTATTTCATGTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	140970190	140984868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140970322_140972128_140972278_140973485_140973921_140974259_140974542_140974688_140974798_140974864_140974942_140975157_140975421_140976297_140976459_140976537_140976691_140976876_140977007_140977873_140977949_140978038_140978129_140978254_140978416_140981600_140981760_140982011_140982092_140983614_140983720_140984032
ENSMUSG00000028920.10_0	chr4	+	5920	10	FSM	ENSMUSG00000028920.10	ENSMUST00000030757.10	5934	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTTAACTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	140875230	140931366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140875491_140895023_140895289_140898134_140898252_140907708_140907844_140920975_140921130_140922491_140922603_140924793_140924891_140925352_140925410_140926240_140926358_140926759
ENSMUSG00000028923.15_0	chr4	-	1891	8	FSM	ENSMUSG00000028923.15	ENSMUST00000030760.15	1906	8	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATCTCAGATGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	140805659	140793828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028923.15_5	chr4	-	757	7	FSM	ENSMUSG00000028923.15	ENST00000443980.6	763	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCCACGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	140805610	140794828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140794924_140797366_140797545_140799839_140799949_140800818_140800901_140800985_140801091_140802270_140802372_140805523
ENSMUSG00000028923.15_6	chr4	-	686	6	FSM	ENSMUSG00000028923.15	ENST00000504551.6	695	6	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	3947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGACCCACGGAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	140805637	140794828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140794924_140795505_140795591_140797366_140797545_140799839_140799949_140800985_140801091_140805523
ENSMUSG00000028926.16_0	chr5	-	5117	14	FSM	ENSMUSG00000028926.16	ENSMUST00000115451.8	5145	14	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATATATCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	5316049	4853399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5315579
ENSMUSG00000028926.16_1	chr5	-	4824	15	FSM	ENSMUSG00000028926.16	ENSMUST00000030763.13	4851	15	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATATATCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	5430179	4853399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5423457_5423490_5430034
ENSMUSG00000028926.16_3	chr5	-	1528	14	FSM	ENSMUSG00000028926.16	ENSMUST00000115452.8	1567	14	29	10	29	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAGAGATAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	5316136	4856702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_4856732_4938836_4938981_4944027_4944168_4972126_4972176_4999531_4999596_5060832_5060927_5086425_5086547_5142957_5143082_5153791_5153855_5185318_5185414_5245277_5245358_5277163_5277259_5298982_5299229_5315952
ENSMUSG00000028931.13_0	chr4	-	3559	15	FSM	ENSMUSG00000028931.13	ENSMUST00000159840.8	3574	15	12	3	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTTTCTGATCTCTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152533285	152475201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152477582_152478198_152478288_152478746_152478868_152479385_152479481_152479581_152479703_152481212_152481299_152485404_152485492_152486381_152486426_152487492_152487538_152489056_152489102_152491583_152491664_152496441_152496480_152497273_152497318_152520261_152520395_152533134
ENSMUSG00000028932.9_0	chr5	+	1764	13	FSM	ENSMUSG00000028932.9	ENSMUST00000239497.2	1775	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTGTCAGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21990291	22008775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21990516_21991647_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004933_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028932.9_10	chr5	+	1323	12	FSM	ENSMUSG00000028932.9	ENST00000425206.6	1338	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGGGCTCTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	21991781	22008701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21991883_22000105_22000144_22000760_22000843_22001530_22001631_22004420_22004553_22004942_22005007_22005541_22005638_22006205_22006371_22007523_22007612_22008067_22008271_22008363_22008461_22008544
ENSMUSG00000028933.12_0	chr5	-	3222	3	FSM	ENSMUSG00000028933.12	ENSMUST00000030773.12	3247	3	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACAATTTAAAACATTTC	NA	NA	NA	NA	NA	NA	NA	NA	25910814	25894825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25897827_25903248_25903331_25910675
ENSMUSG00000028936.16_1	chr4	+	462	4	FSM	ENSMUSG00000028936.16	ENSMUST00000103191.11	474	4	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACAAAACCGGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	152410311	152416927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152410353_152411937_152412043_152414460_152414586_152416736
ENSMUSG00000028936.16_6	chr4	+	412	3	ISM	ENSMUSG00000028936.16	ENST00000234875.9	898	4	10	1611	10	-10	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACAAAACCGGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	152411946	152416927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_152412043_152414460_152414586_152416736
ENSMUSG00000028936.16_7	chr4	+	883	4	FSM	ENSMUSG00000028936.16	ENST00000234875.9	898	4	10	5	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCAAGGCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	152411946	152418533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152412043_152414460_152414586_152416736_152416967_152418101
ENSMUSG00000028937.15_0	chr4	+	1438	9	FSM	ENSMUSG00000028937.15	ENSMUST00000075363.10	1457	9	14	5	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	152262604	152356304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152262798_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUSG00000028937.15_8	chr4	+	1477	9	FSM	ENSMUSG00000028937.15	ENSMUST00000167926.8	1505	9	20	8	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATGAAGCCTAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	152270610	152356304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152270843_152291220_152291339_152302192_152302350_152307527_152307620_152314231_152314347_152322136_152322224_152337605_152337723_152345302_152345488_152355930
ENSMUSG00000028943.19_0	chr4	-	3394	12	FSM	ENSMUSG00000028943.19	ENST00000645284.1	3408	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGCAATTGTACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	152236782	152204859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152205723_152208166_152208251_152212525_152212790_152212864_152213011_152215225_152215668_152218617_152218899_152219925_152220132_152222886_152223019_152223192_152223376_152223495_152223683_152233315_152233510_152236370
ENSMUSG00000028944.15_11	chr5	-	2503	14	FSM	ENSMUSG00000028944.15	ENST00000652159.1	2525	14	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATATATCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25227060	25067859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25226789
ENSMUSG00000028944.15_20	chr5	-	2567	14	FSM	ENSMUSG00000028944.15	ENST00000651378.1	2579	14	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGACGCTTGTAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25264679	25067985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25264218
ENSMUSG00000028944.15_7	chr5	-	3231	16	FSM	ENSMUSG00000028944.15	ENST00000287878.9	3243	16	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAATCCTGTCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	25305567	25067771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25068886_25071076_25071171_25074128_25074276_25076052_25076091_25076491_25076658_25078881_25079009_25080158_25080214_25081986_25082033_25083702_25083762_25085681_25085764_25094079_25094187_25113320_25113391_25152421_25152637_25226789_25227070_25233462_25233535_25305008
ENSMUSG00000028945.10_0	chr5	-	1769	8	FSM	ENSMUSG00000028945.10	ENSMUST00000030787.9	1784	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACTCCCATCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25047613	25007826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25008755_25011996_25012079_25012602_25012651_25012745_25012803_25013350_25013434_25018795_25018864_25022757_25022830_25047182
ENSMUSG00000028945.10_7	chr5	-	100	2	ISM	ENSMUSG00000028945.10	ENST00000411920.1	168	3	154	9	154	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGTATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	25012650	25012008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_25012059_25012600
ENSMUSG00000028945.10_8	chr5	-	159	3	FSM	ENSMUSG00000028945.10	ENST00000411920.1	168	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCAAGTATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	25012804	25012008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25012059_25012600_25012651_25012745
ENSMUSG00000028948.17_0	chr4	+	3710	12	FSM	ENSMUSG00000028948.17	ENSMUST00000084116.13	3722	12	12	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAATAATAACAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	152123795	152144481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152142797
ENSMUSG00000028948.17_4	chr4	+	2255	12	FSM	ENSMUSG00000028948.17	ENSMUST00000103197.5	2271	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCGGTTCCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	152123802	152145945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152124265_152125503_152125724_152125973_152126102_152130151_152130288_152130404_152130493_152131003_152131102_152134991_152135154_152136214_152136516_152137054_152137167_152140504_152140683_152142247_152142382_152145709
ENSMUSG00000028949.14_0	chr5	-	1694	14	FSM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTAACAGACAGCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	24829403	24797631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521_24827667_24829345
ENSMUSG00000028949.14_1	chr5	-	1638	13	ISM	ENSMUSG00000028949.14	ENSMUST00000195943.2	1712	14	1745	8	1745	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACAGCAGCCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24827664	24797627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24827521
ENSMUSG00000028949.14_2	chr5	-	1727	13	FSM	ENSMUSG00000028949.14	ENSMUST00000030791.12	1735	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACAGCAGCCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24807010	24797627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24797803_24798014_24798117_24798222_24798346_24798634_24798771_24798919_24799018_24799829_24799992_24800140_24800243_24800387_24800484_24800720_24800844_24800949_24801073_24801804_24801848_24803589_24803802_24806778
ENSMUSG00000028950.4_1	chr4	-	1762	5	FSM	ENSMUSG00000028950.4	ENST00000351136.7	1777	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGATCCGCTGGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	152122844	152112528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152113455_152115240_152115362_152115777_152115991_152119066_152119374_152122649
ENSMUSG00000028952.13_0	chr4	-	2200	11	FSM	ENSMUSG00000028952.13	ENSMUST00000066715.11	2218	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGTTCAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	152112107	152104237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152104578_152104646_152104736_152105000_152105166_152105235_152105373_152105745_152105901_152105998_152106086_152106483_152106577_152107152_152107265_152110234_152110477_152110844_152111517_152111999
ENSMUSG00000028953.11_0	chr5	-	2551	14	FSM	ENSMUSG00000028953.11	ENSMUST00000030795.10	2569	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCCTCCTTCCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24782453	24770348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24771002_24771476_24771681_24772181_24772311_24772498_24772562_24773202_24773314_24773564_24773655_24773735_24773856_24774068_24774165_24776141_24776245_24777000_24777097_24778419_24778775_24779164_24779378_24781516_24781726_24782344
ENSMUSG00000028954.12_0	chr5	+	3526	15	FSM	ENSMUSG00000028954.12	ENSMUST00000197407.5	3546	15	15	5	15	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAATGTCTGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24890544	24915369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24891021_24894390_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028954.12_4	chr5	+	3245	15	FSM	ENSMUSG00000028954.12	ENSMUST00000068825.8	3269	15	17	7	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAATGTCTGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24890838	24915369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24891021_24894377_24894509_24897804_24897973_24899697_24899760_24900517_24900589_24902002_24902186_24902329_24902422_24903662_24903770_24906347_24906532_24907374_24907483_24908416_24908570_24911435_24911583_24912765_24912862_24913680_24913859_24913986
ENSMUSG00000028955.4_0	chr4	-	2033	4	ISM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	1712	5	1712	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGTCGTGTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	151140698	151131761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618
ENSMUSG00000028955.4_1	chr4	-	2112	5	FSM	ENSMUSG00000028955.4	ENSMUST00000030797.4	2120	5	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTGTGTCGTGTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	151142407	151131761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_151133504_151134451_151134504_151135373_151135533_151140618_151140701_151142330
ENSMUSG00000028957.13_0	chr4	-	5971	21	FSM	ENSMUSG00000028957.13	ENSMUST00000103204.11	5999	21	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGGAGAATGCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	151129104	151088118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_151090417_151092684_151092836_151093706_151093891_151094858_151094956_151096697_151097390_151097998_151098227_151102355_151102524_151102674_151102791_151103308_151103445_151108866_151108997_151109528_151109658_151110569_151110676_151113205_151113363_151113592_151113700_151116369_151116449_151118313_151118454_151122345_151122395_151125728_151125931_151127132_151127249_151128015_151128162_151128564
ENSMUSG00000028958.16_0	chr5	-	1319	3	FSM	ENSMUSG00000028958.16	ENSMUST00000030799.15	1333	3	8	6	8	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGTGTGTCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24652844	24650461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24651272_24651531_24651951_24652754
ENSMUSG00000028958.16_2	chr5	-	1533	4	FSM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCAGTGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24693516	24650463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24651272_24651531_24651951_24652076_24652339_24693472
ENSMUSG00000028958.16_3	chr5	-	1483	3	ISM	ENSMUSG00000028958.16	ENST00000392818.7	1533	4	41184	0	-17	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCCAGTGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24652332	24650463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_24651272_24651531_24651951_24652076
ENSMUSG00000028959.15_1	chr5	-	1882	10	FSM	ENSMUSG00000028959.15	ENSMUST00000030800.13	1893	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAAGTCTTGTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	24650275	24646037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24646260_24646333_24646449_24646525_24646662_24646729_24646822_24646921_24647082_24647179_24647394_24648001_24648142_24648274_24648455_24648892_24649304_24650063
ENSMUSG00000028960.21_0	chr4	-	5608	27	FSM	ENSMUSG00000028960.21	ENSMUST00000103212.10	5626	27	13	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGAGCCTCCTGTGAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	149511193	149412877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444834_149444916_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ENSMUSG00000028960.21_14	chr4	-	4722	27	FSM	ENSMUSG00000028960.21	ENST00000253251.12	4741	27	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAATCTCCCCTCCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	149511187	149413755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149414195_149414647_149414795_149415779_149415955_149419568_149419761_149421841_149421977_149427335_149427481_149428971_149429099_149432383_149432620_149435114_149435214_149435914_149436043_149437384_149437485_149439874_149440014_149442081_149442281_149443653_149443768_149444734_149444828_149444912_149445034_149445740_149445798_149449910_149449995_149452757_149452873_149455615_149455717_149457284_149457427_149465639_149465869_149468194_149468340_149469581_149469670_149471537_149471674_149483055_149483243_149510338
ENSMUSG00000028961.16_0	chr4	-	2207	13	FSM	ENSMUSG00000028961.16	ENSMUST00000084124.7	2218	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTCTTTGTTTCTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	149251153	149234447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149235221_149235309_149235433_149235569_149235670_149238320_149238455_149238622_149238754_149241063_149241254_149242417_149242553_149244515_149244586_149245291_149245411_149246085_149246152_149249506_149249687_149250463_149250540_149251043
ENSMUSG00000028962.15_0	chr5	+	4164	23	FSM	ENSMUSG00000028962.15	ENSMUST00000080067.13	4179	23	10	5	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTAGGCTTGGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24630239	24645943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24630434_24632520_24632635_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUSG00000028962.15_14	chr5	+	3916	22	FSM	ENSMUSG00000028962.15	ENSMUST00000115049.9	3924	22	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAACCTAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24633205	24645937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24633272_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUSG00000028962.15_19	chr5	+	4234	22	FSM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAACCTAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24633442	24645937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24633827_24634413_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUSG00000028962.15_23	chr5	+	3844	21	ISM	ENSMUSG00000028962.15	ENSMUST00000115047.3	4264	22	999	8	999	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCCAACCTAGGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24634419	24645937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_24634577_24634701_24634947_24635028_24635148_24636206_24636440_24636520_24636664_24637759_24637941_24639101_24639238_24639335_24639502_24639632_24639748_24639830_24640016_24640112_24640339_24640542_24640759_24640839_24640989_24641074_24641270_24643692_24643948_24644053_24644144_24644229_24644397_24644734_24644989_24645078_24645249_24645401_24645576_24645669
ENSMUSG00000028964.15_0	chr4	-	892	7	FSM	ENSMUSG00000028964.15	ENSMUST00000030805.14	908	7	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	150994372	150981594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150994239
ENSMUSG00000028964.15_23	chr4	-	901	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105673.8	919	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAACCTCAGCAGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	150994098	150981703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150993847
ENSMUSG00000028964.15_27	chr4	-	337	4	FSM	ENSMUSG00000028964.15	ENST00000377493.9	353	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGGCAGTGAGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	150992862	150985474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150985552_150988271_150988342_150991496_150991599_150992774
ENSMUSG00000028964.15_6	chr4	-	870	7	FSM	ENSMUSG00000028964.15	ENSMUST00000105675.8	882	7	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTACCTTTGTGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	150998887	150981594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150981929_150985464_150985552_150988271_150988342_150989706_150989767_150991496_150991599_150992774_150992881_150998776
ENSMUSG00000028967.11_1	chr4	+	3026	4	FSM	ENSMUSG00000028967.11	ENSMUST00000030811.2	3043	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTTAATAATGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	150939540	150953338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150939729_150949531_150949727_150949820_150949898_150950772
ENSMUSG00000028967.11_2	chr4	+	941	3	FSM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTCCTATACCTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	150939635	150951425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150939729_150949531_150949727_150950772
ENSMUSG00000028967.11_3	chr4	+	849	2	ISM	ENSMUSG00000028967.11	ENST00000469499.5	948	3	9900	2	9900	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTCCTATACCTCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	150949530	150951425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_150949727_150950772
ENSMUSG00000028969.11_3	chr5	-	2042	12	FSM	ENSMUSG00000028969.11	ENSMUST00000030814.11	2059	12	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATAAAAAGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24628525	24623252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795_24627885_24628446
ENSMUSG00000028969.11_4	chr5	-	1962	11	ISM	ENSMUSG00000028969.11	ENSMUST00000030814.11	2059	12	645	14	600	-14	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATATAAAAAGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	24627883	24623252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_24624461_24624597_24624679_24624780_24624842_24625256_24625327_24625490_24625588_24625728_24625804_24625952_24626049_24627329_24627387_24627495_24627557_24627645_24627714_24627795
ENSMUSG00000028970.10_0	chr5	+	4291	28	FSM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGGAGCCATCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	8848191	8916306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8848290_8848735_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUSG00000028970.10_3	chr5	+	4203	27	ISM	ENSMUSG00000028970.10	ENSMUST00000009058.10	4306	28	548	1	548	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATCTGTTATGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	8848733	8916314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_8848807_8855432_8855482_8856007_8856171_8860557_8860616_8862654_8862847_8863573_8863746_8864722_8864848_8871271_8871444_8873931_8874046_8874186_8874298_8874472_8874599_8874688_8874893_8875112_8875284_8875550_8875713_8877325_8877500_8877702_8877850_8878822_8878931_8882193_8882272_8885027_8885112_8887590_8887795_8895747_8895849_8899511_8899653_8901456_8901614_8903428_8903627_8911423_8911631_8914114_8914262_8915749
ENSMUSG00000028973.19_0	chr5	+	3067	17	FSM	ENSMUSG00000028973.19	ENSMUST00000115077.8	3074	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAACCTCAGACTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24598673	24615045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24598701_24599153_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028973.19_3	chr5	+	2923	16	FSM	ENSMUSG00000028973.19	ENSMUST00000073076.12	2939	16	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGGCCGAGGCTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	24599164	24614939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24599582_24604910_24605221_24605522_24605679_24605754_24605850_24605972_24606079_24606760_24606923_24607042_24607129_24607239_24607338_24608070_24608177_24610812_24610847_24611115_24611253_24611397_24611493_24611665_24611800_24612305_24612454_24613565_24613817_24614351
ENSMUSG00000028974.14_0	chr4	+	1818	5	FSM	ENSMUSG00000028974.14	ENSMUST00000103216.10	1835	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACCAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	149188611	149203319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228
ENSMUSG00000028974.14_1	chr4	+	2448	6	FSM	ENSMUSG00000028974.14	ENSMUST00000030816.4	2457	6	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATCCAGCTGCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	149188607	149205100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149188844_149190608_149190771_149192225_149192369_149201864_149202055_149202228_149202381_149203535
ENSMUSG00000028975.17_0	chr4	-	1993	9	FSM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTAATTCCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	149184328	149044999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476_149160525_149184228
ENSMUSG00000028975.17_1	chr4	-	1896	8	ISM	ENSMUSG00000028975.17	ENSMUST00000103217.11	2006	9	23806	8	23806	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTAATTCCTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	149160527	149044999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_149046252_149047898_149047991_149050678_149050777_149051980_149052084_149055006_149055093_149068493_149068623_149126177_149126263_149160476
ENSMUSG00000028977.18_0	chr4	+	4338	16	FSM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGTAACAGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	148888891	149029581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148888972_148922722_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714
ENSMUSG00000028977.18_1	chr4	+	4257	15	ISM	ENSMUSG00000028977.18	ENSMUST00000094464.10	4349	16	33833	10	33833	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCACCTGAGTAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	148922718	149029576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_148922878_148974778_148974834_148986161_148986201_149013453_149013940_149017214_149018050_149019037_149019107_149020622_149020714_149021415_149021581_149022597_149022771_149022931_149023780_149025738_149025872_149026123_149026188_149027359_149027515_149027659_149027783_149028714
ENSMUSG00000028980.15_0	chr4	-	4727	5	FSM	ENSMUSG00000028980.15	ENSMUST00000030830.4	4745	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTTAACATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150093473	150063942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150067379_150068359_150068630_150078925_150079044_150080201_150080839_150093207
ENSMUSG00000028982.10_0	chr4	-	1864	7	FSM	ENSMUSG00000028982.10	ENSMUST00000105686.3	1887	7	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTATAAATATTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	149858716	149828497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149829395_149833505_149833787_149836860_149836928_149838255_149838357_149840531_149840610_149846823_149847004_149858456
ENSMUSG00000028986.13_0	chr5	+	2949	11	FSM	ENSMUSG00000028986.13	ENSMUST00000030841.10	2966	11	12	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTAAATAGATTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	24305614	24365778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24305873_24331819_24331923_24332666_24332761_24332977_24333103_24339961_24340138_24343303_24343479_24346148_24346292_24354122_24354364_24361887_24362090_24363536_24363635_24364444
ENSMUSG00000028988.14_0	chr4	+	2658	5	FSM	ENSMUSG00000028988.14	ENSMUST00000030839.13	2674	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1935	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTGCTGGGTGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	149602701	149650887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149602837_149624285_149624371_149630167_149630289_149630858_149630950_149648661
ENSMUSG00000028990.14_0	chr4	+	1802	7	FSM	ENSMUSG00000028990.14	ENSMUST00000030842.8	1817	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGTGTCTATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	149569762	149581122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149570457_149571208_149571318_149572512_149572649_149573086_149573186_149577655_149577752_149578188_149578271_149580536
ENSMUSG00000028991.16_1	chr4	+	8539	58	FSM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	12	13	-2	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAAAGCATATATGT	NA	NA	NA	NA	NA	NA	NA	NA	148533079	148642127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ENSMUSG00000028991.16_10	chr4	+	923	4	ISM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	3636	13	3636	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAGACTATAATTAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	148536717	148539417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_148536890_148537478_148537588_148538214_148538448_148539008
ENSMUSG00000028991.16_4	chr4	+	989	5	FSM	ENSMUSG00000028991.16	ENSMUST00000057580.8	1003	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTATAATTAGAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	148533086	148539421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148533145_148536713_148536890_148537478_148537588_148538214_148538448_148539008
ENSMUSG00000028991.16_9	chr4	+	8481	57	ISM	ENSMUSG00000028991.16	ENSMUST00000103221.10	8564	58	3645	7	3631	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCATATATGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	148536712	148642133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_148536890_148537478_148537588_148538214_148538448_148539008_148539210_148540441_148540577_148543083_148543360_148543440_148543550_148547243_148547431_148548148_148548278_148548759_148549005_148549403_148549620_148550347_148550554_148552706_148552830_148553444_148553535_148553823_148553917_148554678_148554814_148555028_148555159_148556370_148556622_148565321_148565409_148568011_148568180_148568766_148568880_148569082_148569246_148570505_148570599_148571232_148571380_148573932_148574076_148575791_148575955_148576077_148576224_148596227_148596304_148599282_148599423_148605748_148605850_148608915_148609032_148610180_148610259_148610454_148610563_148614938_148615065_148615134_148615267_148618318_148618435_148619364_148619483_148620967_148621217_148621818_148621920_148622319_148622417_148622732_148622832_148622919_148623043_148623184_148623368_148624437_148624573_148624741_148624917_148628875_148629012_148629966_148630115_148630854_148630978_148632060_148632144_148633824_148633898_148634247_148634323_148634544_148634681_148635415_148635482_148637168_148637250_148637487_148637569_148640723_148640830_148641301
ENSMUSG00000028992.14_0	chr4	-	2638	4	FSM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	12	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCACCAAGGACGACT	NA	NA	NA	NA	NA	NA	NA	NA	149569647	149552035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149554240_149557741_149557926_149558884_149559053_149569565
ENSMUSG00000028992.14_1	chr4	-	2557	3	ISM	ENSMUSG00000028992.14	ENSMUST00000119921.8	2657	4	10606	7	10576	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTCACCAAGGACGACT	NA	NA	NA	NA	NA	NA	NA	NA	149559053	149552035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_149554240_149557741_149557926_149558884
ENSMUSG00000028992.14_2	chr4	-	1144	4	ISM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	10602	5	10576	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCTAACTTTAAATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	149559053	149553020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884
ENSMUSG00000028992.14_3	chr4	-	1225	5	FSM	ENSMUSG00000028992.14	ENSMUST00000030845.13	1238	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCTAACTTTAAATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	149569647	149553020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149553669_149554096_149554240_149557741_149557926_149558884_149559053_149569565
ENSMUSG00000028995.15_0	chr5	-	5608	11	FSM	ENSMUSG00000028995.15	ENSMUST00000030849.13	5659	11	28	23	-14	-23	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACTAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24235660	24165951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24170357_24184485_24184646_24185484_24185573_24188147_24188265_24190742_24190839_24191135_24191252_24191731_24191813_24192882_24193063_24196733_24196836_24204938_24205018_24235476
ENSMUSG00000028998.7_0	chr5	-	1109	3	FSM	ENSMUSG00000028998.7	ENSMUST00000030851.7	1125	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCAGTTTATTAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	24049150	24043948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24044827_24046707_24046757_24048968
ENSMUSG00000028999.16_0	chr5	+	1854	2	FSM	ENSMUSG00000028999.16	ENSMUST00000120869.6	1886	2	13	19	9	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAGAACAAAACAAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	23992721	23994982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23992881_23993287
ENSMUSG00000028999.16_1	chr5	+	3290	15	FSM	ENSMUSG00000028999.16	ENSMUST00000030852.13	3298	15	7	1	3	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGTATTTCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	23992715	24025366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010307_24010482_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ENSMUSG00000028999.16_3	chr5	+	526	3	FSM	ENSMUSG00000028999.16	ENSMUST00000117783.8	560	3	25	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCCATTGATTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23992734	23998889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23992881_23993287_23993334_23998555
ENSMUSG00000028999.16_4	chr5	+	3035	14	FSM	ENSMUSG00000028999.16	ENSMUST00000115113.3	3048	14	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCAAAGCACAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	23992719	24025289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23992881_23993287_23993334_23999300_23999486_24005592_24005835_24010568_24010719_24012036_24012194_24014781_24014893_24014966_24015193_24015894_24016033_24016707_24016908_24020649_24020865_24021736_24021918_24022032_24022152_24024385
ENSMUSG00000029001.16_4	chr4	-	912	5	FSM	ENSMUSG00000029001.16	ENST00000251546.8	933	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGAAACTCCCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	148245093	148237887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148238102_148240602_148240739_148241065_148241164_148242993_148243270_148244905
ENSMUSG00000029001.16_5	chr4	-	803	5	FSM	ENSMUSG00000029001.16	ENST00000376768.5	818	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGAAACTCCCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	148243252	148237887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148238102_148240602_148240739_148240851_148240948_148241065_148241164_148242993
ENSMUSG00000029003.12_0	chr4	+	787	8	FSM	ENSMUSG00000029003.12	ENST00000376667.7	805	8	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAGGTAAGTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	148215235	148229644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148215428_148225241_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560
ENSMUSG00000029003.12_6	chr4	+	1517	8	FSM	ENSMUSG00000029003.12	ENSMUST00000030860.9	1535	8	8	10	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAACCAAACAGGATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	148224646	148230146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148225292_148225371_148225491_148227442_148227515_148227998_148228100_148228720_148228816_148229110_148229185_148229560_148229654_148229828
ENSMUSG00000029004.16_0	chr5	+	7233	26	FSM	ENSMUSG00000029004.16	ENSMUST00000094962.9	7252	26	8	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAATCAAAACTGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	23639446	23709222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23639782_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23700983_23701239_23701401_23701547_23701969_23702221_23702536_23702594_23702725_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724_23705811_23706521
ENSMUSG00000029004.16_16	chr5	+	7299	27	FSM	ENSMUSG00000029004.16	ENSMUST00000115128.8	7317	27	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAATCAAAACTGATATGA	NA	NA	NA	NA	NA	NA	NA	NA	23639453	23709222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_23639782_23651523_23651597_23655149_23655335_23668013_23668129_23669700_23669931_23672105_23672187_23676745_23676805_23678478_23678652_23681483_23681523_23683511_23683743_23683850_23683982_23686206_23686325_23687399_23687510_23690344_23690610_23691299_23691399_23697265_23697431_23698196_23698506_23700983_23701239_23701401_23701547_23701969_23702221_23702536_23702594_23702725_23703293_23704279_23704591_23705253_23705343_23705448_23705575_23705724_23705811_23706521
ENSMUSG00000029007.9_0	chr4	-	3981	5	FSM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATGCATTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	148172479	148161523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148165062_148166019_148166216_148166727_148166834_148168415_148168451_148172373
ENSMUSG00000029007.9_2	chr4	-	212	2	ISM	ENSMUSG00000029007.9	ENST00000510878.1	269	3	3974	6	3974	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCCCTCCGCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	148168449	148166037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_148166216_148168415
ENSMUSG00000029007.9_3	chr4	-	263	3	FSM	ENSMUSG00000029007.9	ENST00000510878.1	269	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCCCTCCGCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	148172423	148166037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148166216_148168415_148168451_148172373
ENSMUSG00000029007.9_4	chr4	-	180	1	ISM	ENSMUSG00000029007.9	ENSMUST00000030865.9	3996	5	6274	4517	6209	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTCCGCCCCGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	148166214	148166034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_148166000_148166200
ENSMUSG00000029007.9_5	chr4	-	533	4	FSM	ENSMUSG00000029007.9	ENST00000376627.6	546	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCCCCCTCCGCCCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	148172447	148166037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148166216_148166727_148166834_148168051_148168227_148172373
ENSMUSG00000029009.18_0	chr4	+	6049	12	FSM	ENSMUSG00000029009.18	ENSMUST00000069604.15	6072	12	20	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAGCTGTTTTTAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	148125667	148144005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148125779_148126040_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029009.18_1	chr4	+	2085	12	FSM	ENSMUSG00000029009.18	ENST00000423400.7	2092	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCTCAACAGGCACACCA	NA	NA	NA	NA	NA	NA	NA	NA	148125674	148140051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148125779_148126043_148126287_148127881_148128121_148128900_148129012_148132529_148132724_148135828_148136080_148136321_148136457_148136555_148136737_148136970_148137154_148138036_148138139_148139441_148139562_148139829
ENSMUSG00000029012.12_0	chr5	-	2086	14	FSM	ENSMUSG00000029012.12	ENSMUST00000030872.12	2103	14	16	1	16	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTAGCTGTGTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	22755357	22691487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_22692216_22704973_22705087_22721701_22721813_22727388_22727437_22728513_22728627_22729813_22729867_22731360_22731452_22731532_22731582_22734152_22734284_22738760_22738873_22742519_22742595_22751395_22751597_22752921_22753015_22755189
ENSMUSG00000029014.15_0	chr5	-	1812	15	FSM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	6	8	6	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCATCATTTAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21990082	21962259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUSG00000029014.15_1	chr5	-	1717	14	ISM	ENSMUSG00000029014.15	ENST00000249270.11	1826	15	1852	8	1852	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCATCATTTAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	21988236	21962259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044
ENSMUSG00000029014.15_12	chr5	-	2117	17	FSM	ENSMUSG00000029014.15	ENSMUST00000030771.12	2133	17	11	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGAATTATAGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	21990238	21962269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21962408_21962762_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUSG00000029014.15_18	chr5	-	2400	16	FSM	ENSMUSG00000029014.15	ENSMUST00000115193.8	2416	16	10	6	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCACTTGGAATTATAG	NA	NA	NA	NA	NA	NA	NA	NA	21990172	21962275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21962918_21965363_21965472_21965623_21965725_21966538_21966724_21968443_21968514_21968738_21968828_21971553_21971704_21973434_21973557_21973643_21973736_21975482_21975549_21978775_21978857_21979931_21980074_21981714_21981814_21986318_21986395_21988044_21988236_21989986
ENSMUSG00000029015.10_0	chr5	-	2335	17	FSM	ENSMUSG00000029015.10	ENST00000432958.6	2355	17	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAAAGATTAACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	22052356	22015978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_22016340_22018322_22018378_22018851_22019053_22019894_22020003_22020665_22020759_22021936_22022007_22024679_22024787_22026026_22026105_22026992_22027107_22028447_22028596_22036444_22036528_22039214_22039368_22042219_22042385_22042878_22043046_22045563_22045675_22051220_22051361_22052175
ENSMUSG00000029016.14_0	chr4	-	5184	23	FSM	ENSMUSG00000029016.14	ENSMUST00000137724.8	5198	23	13	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGTCTCCACGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	148123265	148088716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108682_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ENSMUSG00000029016.14_1	chr4	-	3281	23	FSM	ENSMUSG00000029016.14	ENSMUST00000030879.12	3306	23	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCAGTAGTCCCCACT	NA	NA	NA	NA	NA	NA	NA	NA	148123245	148090590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148091319_148093137_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148113843_148113910_148122370_148122431_148123137
ENSMUSG00000029016.14_2	chr4	-	2607	21	FSM	ENSMUSG00000029016.14	ENST00000312413.10	2621	21	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAGTAGGAGAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	148123380	148093152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148093264_148093355_148093464_148095110_148095268_148095428_148095587_148097073_148097261_148098132_148098240_148098323_148098484_148098588_148098743_148098957_148099085_148101308_148101436_148101952_148102120_148102359_148102474_148103297_148103431_148104174_148104234_148105916_148105985_148107823_148107951_148108565_148108673_148110989_148111057_148113006_148113073_148122370_148122431_148123137
ENSMUSG00000029017.14_0	chr5	+	1598	13	FSM	ENSMUSG00000029017.14	ENSMUST00000030882.12	1615	13	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGCGTTAGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21942149	21962144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21942275_21943866_21944008_21945037_21945125_21945482_21945613_21947755_21947955_21948376_21948457_21950975_21951089_21951975_21952120_21953746_21953908_21961399_21961486_21961584_21961674_21961812_21961889_21961977
ENSMUSG00000029020.14_0	chr4	-	2424	18	ISM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	1207	1	1203	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACGAAGAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	147987941	147959829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811
ENSMUSG00000029020.14_26	chr4	-	2481	18	ISM	ENSMUSG00000029020.14	ENST00000675113.1	2525	19	1206	1	1202	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACGAAGAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	147987942	147959829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987811
ENSMUSG00000029020.14_27	chr4	-	2468	19	FSM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACGAAGAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147987811_147987952_147989114
ENSMUSG00000029020.14_28	chr4	-	2524	19	FSM	ENSMUSG00000029020.14	ENST00000675113.1	2525	19	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACGAAGAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	147989148	147959829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983156_147987811_147987952_147989114
ENSMUSG00000029020.14_30	chr4	-	2368	18	FSM	ENSMUSG00000029020.14	ENST00000444836.5	2372	18	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGCACGAAGAAGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	147989188	147959829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920_147983100_147989114
ENSMUSG00000029020.14_78	chr4	-	2291	17	ISM	ENSMUSG00000029020.14	ENST00000235329.10	2469	19	6048	5	6044	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGGACCTGCACGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	147983100	147959833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_147959916_147961407_147961543_147963170_147963368_147964398_147964555_147966473_147966695_147967337_147967441_147967674_147967780_147968083_147968211_147969909_147970032_147970137_147970206_147970727_147970882_147971662_147971771_147971871_147971981_147973076_147973202_147974570_147974734_147979019_147979156_147982920
ENSMUSG00000029022.19_0	chr4	-	1803	10	FSM	ENSMUSG00000029022.19	ENSMUST00000030886.15	1813	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAAGCCTCTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	147953167	147945235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952825
ENSMUSG00000029022.19_2	chr4	-	1747	10	FSM	ENSMUSG00000029022.19	ENSMUST00000172710.8	1769	10	16	6	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCCTGTCTCCATGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	147953257	147945248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147945543_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147952958
ENSMUSG00000029022.19_3	chr4	-	1876	12	FSM	ENSMUSG00000029022.19	ENSMUST00000119975.3	1879	12	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCCTGTCTCCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	147952940	147945250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147945471_147945810_147945949_147946702_147946800_147946894_147947025_147947353_147947407_147947484_147947594_147949645_147949728_147950111_147950472_147950691_147950877_147951787_147952060_147952525_147952641_147952825
ENSMUSG00000029026.18_0	chr4	-	1842	11	FSM	ENSMUSG00000029026.18	ENST00000378280.5	1861	11	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGGAACGTACCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	154181612	154143452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154143784_154145044_154145139_154145818_154145958_154146968_154147097_154148341_154148431_154148769_154148913_154149094_154149205_154151466_154151583_154152033_154152221_154165785_154166029_154181350
ENSMUSG00000029027.10_0	chr4	-	2062	7	FSM	ENSMUSG00000029027.10	ENSMUST00000030893.3	2093	7	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGACATGTCAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	154059558	154048911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154050071_154053549_154053651_154054397_154054569_154056037_154056118_154057236_154057426_154059025_154059153_154059323
ENSMUSG00000029028.15_0	chr4	+	3389	7	FSM	ENSMUSG00000029028.15	ENSMUST00000030894.15	3395	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGACATCTCTGCATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	154096259	154105963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154096894_154100112_154100566_154101874_154101992_154102826_154102943_154103386_154103490_154103850_154103941_154104087
ENSMUSG00000029029.15_0	chr4	+	1585	12	FSM	ENSMUSG00000029029.15	ENSMUST00000030895.12	1598	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTGAACAGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	154226835	154241267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154226971_154229699_154229853_154230947_154231065_154233166_154233240_154236084_154236189_154236794_154236882_154237017_154237153_154237249_154237328_154238991_154239098_154239697_154239824_154240557_154240750_154240988
ENSMUSG00000029030.15_0	chr4	-	1702	4	FSM	ENSMUSG00000029030.15	ENSMUST00000030896.15	1724	4	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAACCAAATGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	154245113	154241953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154243023_154243725_154243880_154244541_154244719_154244811
ENSMUSG00000029033.17_0	chr4	+	4351	24	FSM	ENSMUSG00000029033.17	ENSMUST00000105584.10	4365	24	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	155976292	155991707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155985460_155985473_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ENSMUSG00000029033.17_12	chr4	+	3489	21	FSM	ENSMUSG00000029033.17	ENST00000354700.10	3494	21	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATCCATGGACAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	155981026	155991509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986116_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ENSMUSG00000029033.17_3	chr4	+	4292	23	FSM	ENSMUSG00000029033.17	ENSMUST00000079031.6	4301	23	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTGCCTGCTCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	155976339	155991707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155976899_155980567_155980626_155981023_155981144_155981340_155981395_155983327_155983387_155983873_155984058_155984415_155984461_155984545_155984642_155984743_155984819_155986131_155986245_155986332_155986385_155986588_155986690_155986761_155986874_155987114_155987324_155987416_155987487_155987595_155987691_155987767_155987971_155988207_155988316_155989284_155989384_155989469_155989691_155989866_155989977_155990064_155990176_155990269
ENSMUSG00000029034.10_0	chr4	+	2355	17	FSM	ENSMUSG00000029034.10	ENSMUST00000030901.9	2368	17	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATCTCCACTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	155954010	155973555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155954178_155956583_155956682_155957306_155957381_155959594_155959824_155969554_155969654_155969743_155969779_155970021_155970161_155970548_155970614_155971254_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852_155972983_155973076
ENSMUSG00000029034.10_9	chr4	+	1476	12	FSM	ENSMUSG00000029034.10	ENST00000421495.6	1488	12	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGCATCACTATTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	155969560	155972991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155969654_155969743_155969779_155970021_155970161_155970548_155970641_155971116_155971445_155971572_155971657_155971888_155971979_155972061_155972225_155972311_155972420_155972504_155972567_155972640_155972784_155972852
ENSMUSG00000029036.19_0	chr4	-	2403	16	FSM	ENSMUSG00000029036.19	ENSMUST00000030903.12	2413	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGCTTGATGGCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	155845540	155825097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155825810_155830485_155830595_155831770_155831939_155833127_155833199_155833613_155833666_155834588_155834714_155834929_155835056_155835324_155835382_155835893_155836050_155838023_155838094_155838338_155838505_155839213_155839284_155840135_155840196_155840517_155840620_155841548_155841626_155845258
ENSMUSG00000029038.10_0	chr4	+	1450	5	FSM	ENSMUSG00000029038.10	ENSMUST00000030905.9	1472	5	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGGGAAAAAAAACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	155789264	155818322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383_155816503_155817929
ENSMUSG00000029038.10_4	chr4	+	848	4	FSM	ENSMUSG00000029038.10	ENSMUST00000105595.2	874	4	21	5	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTTGACCAAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	155789612	155816641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155789919_155799918_155800063_155815781_155815922_155816383
ENSMUSG00000029047.14_0	chr4	+	1669	6	FSM	ENSMUSG00000029047.14	ENSMUST00000103180.4	1688	6	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGTATTAGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	155151480	155156879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155151632_155152279_155152361_155153119_155153527_155154843_155155020_155155097_155155234_155156161
ENSMUSG00000029048.4_0	chr4	-	1586	7	FSM	ENSMUSG00000029048.4	ENSMUST00000030914.4	1596	7	10	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTCGTCTACACGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	155170820	155158566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155162950_155163051_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029048.4_7	chr4	-	1281	6	FSM	ENSMUSG00000029048.4	ENST00000378513.7	1298	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAACAAGCTCTTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	155170817	155158768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155159486_155160045_155160182_155161168_155161248_155165255_155165361_155167123_155167212_155170661
ENSMUSG00000029049.15_0	chr4	+	1633	14	FSM	ENSMUSG00000029049.15	ENSMUST00000030915.11	1659	14	21	5	21	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGTAGCACCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155171054	155229957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155171139_155171877_155171950_155173942_155174042_155175339_155175451_155176725_155176817_155177518_155177607_155185722_155185820_155186546_155186658_155195384_155195509_155195873_155196047_155213135_155213258_155213339_155213423_155226858_155226903_155229623
ENSMUSG00000029050.16_0	chr4	-	5514	7	FSM	ENSMUSG00000029050.16	ENSMUST00000030917.6	5522	7	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCATGGGTGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	155307045	155238535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008
ENSMUSG00000029050.16_1	chr4	-	5304	8	NNC	ENSMUSG00000029050.16	novel	5309	8	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCATGGGTGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	155306988	155238535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_155241987_155242402_155242634_155243744_155244038_155244152_155244416_155245036_155245153_155245290_155245414_155306008_155306659_155306811
ENSMUSG00000029053.17_0	chr4	-	4073	15	FSM	ENSMUSG00000029053.17	ENSMUST00000103178.11	4083	15	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGAAAATGCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	155430224	155344590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155429906
ENSMUSG00000029053.17_2	chr4	-	2577	18	FSM	ENSMUSG00000029053.17	ENSMUST00000030922.15	2641	18	61	3	40	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAGCATCAGTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	155445757	155346180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155346989_155347158_155347275_155352151_155352242_155352640_155352721_155353489_155353610_155355655_155355744_155355925_155356062_155357397_155357485_155371236_155371335_155374087_155374277_155374959_155375013_155377614_155377697_155378723_155378856_155385386_155385473_155439110_155439162_155440883_155440974_155441937_155442060_155445608
ENSMUSG00000029054.9_0	chr4	-	1353	8	FSM	ENSMUSG00000029054.9	ENST00000640067.1	1370	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACGGCAGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	155473496	155469863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155470149_155470391_155470604_155470859_155471016_155471610_155471833_155472314_155472398_155472711_155472933_155473022_155473091_155473390
ENSMUSG00000029054.9_1	chr4	-	1198	8	FSM	ENSMUSG00000029054.9	ENST00000640949.1	1217	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACGGCAGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	155473494	155469863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155470149_155470391_155470535_155470859_155471016_155471610_155471749_155472314_155472398_155472711_155472933_155473022_155473091_155473390
ENSMUSG00000029056.14_0	chr4	+	2491	19	FSM	ENSMUSG00000029056.14	ENSMUST00000030931.11	2508	19	12	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTTAAATAATCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	155048591	155065323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155048727_155053586_155053670_155054029_155054245_155054450_155054635_155054903_155054997_155055330_155055485_155055829_155056012_155056605_155056688_155056925_155057027_155059086_155059243_155060718_155060832_155061039_155061128_155061659_155061812_155062607_155062664_155062849_155062900_155063377_155063483_155063948_155064050_155064182_155064252_155064951
ENSMUSG00000029059.10_0	chr4	-	858	6	FSM	ENSMUSG00000029059.10	ENST00000378427.6	865	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGCAAGGAGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	154983132	154979578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154979958_154981496_154981584_154981805_154981882_154981962_154982027_154982584_154982637_154982932
ENSMUSG00000029059.10_1	chr4	-	946	6	FSM	ENSMUSG00000029059.10	ENST00000444521.6	956	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAGCAAGGAGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	154983129	154979578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154979958_154981496_154981616_154981805_154981882_154981962_154982086_154982584_154982637_154982932
ENSMUSG00000029059.10_2	chr4	-	910	6	FSM	ENSMUSG00000029059.10	ENST00000378424.9	924	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACCAGCAAGGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	154983128	154979581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154979958_154981496_154981584_154981805_154981882_154981962_154982086_154982584_154982637_154982932
ENSMUSG00000029060.18_0	chr4	-	3618	19	FSM	ENSMUSG00000029060.18	ENSMUST00000103176.10	3642	19	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGACTTTGCTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	155753637	155739144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562_155745832_155751470_155751627_155753030
ENSMUSG00000029060.18_4	chr4	-	2862	18	FSM	ENSMUSG00000029060.18	ENST00000504599.6	2877	18	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACTCCACACGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745798	155739212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_5	chr4	-	2484	16	FSM	ENSMUSG00000029060.18	ENST00000378712.5	2494	16	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACTCCACACGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745803	155739212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155739451_155739561_155739628_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_8	chr4	-	2667	17	FSM	ENSMUSG00000029060.18	ENST00000518681.6	2682	17	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACTCCACACGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745798	155739212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743459_155743579_155743723_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029060.18_9	chr4	-	2852	18	FSM	ENSMUSG00000029060.18	ENST00000520777.6	2865	18	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCACTCCACACGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	155745800	155739212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155739451_155739561_155739628_155739708_155739897_155739978_155740158_155740528_155740763_155740850_155740978_155741102_155741264_155741369_155741527_155741622_155741772_155741845_155741980_155742054_155742218_155742311_155742417_155743350_155743447_155743579_155743723_155743844_155744040_155744134_155744242_155745306_155745479_155745562
ENSMUSG00000029061.3_0	chr4	-	1416	8	FSM	ENSMUSG00000029061.3	ENSMUST00000030937.2	1434	8	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGTGTTGTTTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	155737824	155735112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155735341_155735463_155735591_155735695_155735807_155735887_155736053_155736441_155736610_155736678_155736819_155736905_155737043_155737484
ENSMUSG00000029062.15_0	chr4	+	2584	20	FSM	ENSMUSG00000029062.15	ENSMUST00000067081.10	2595	20	1	10	1	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155709326	155734385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155709399_155709987_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_12	chr4	+	2406	20	FSM	ENSMUSG00000029062.15	ENST00000340677.9	2420	20	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGCTTGATGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	155709995	155734240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155710112_155710183_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_15	chr4	+	2359	19	FSM	ENSMUSG00000029062.15	ENST00000357760.6	2373	19	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGCTTGATGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	155709995	155734240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718515_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_19	chr4	+	2326	19	FSM	ENSMUSG00000029062.15	ENST00000358779.9	2343	19	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGGCTTGATGGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	155709998	155734240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155710112_155711230_155711347_155713152_155713251_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_26	chr4	+	2617	19	ISM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	635	10	15	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155710001	155734385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_7	chr4	+	2513	19	FSM	ENSMUSG00000029062.15	ENSMUST00000105600.8	3170	19	647	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155709986	155734385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155710112_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029062.15_9	chr4	+	2663	20	FSM	ENSMUSG00000029062.15	ENSMUST00000105598.2	2673	20	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAAGAAGTGTCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155709366	155734385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155709399_155709987_155710231_155711230_155711347_155713152_155713281_155714650_155714790_155718545_155718683_155722976_155723100_155724050_155724147_155724233_155724399_155725203_155725270_155725971_155726148_155726941_155727033_155731939_155732062_155732318_155732425_155732739_155732862_155732942_155733051_155733173_155733291_155733468_155733618_155733878_155734069_155734148
ENSMUSG00000029063.17_0	chr4	+	2934	12	FSM	ENSMUSG00000029063.17	ENSMUST00000030939.14	2946	12	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155646838	155675446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155646913_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029063.17_12	chr4	+	3132	12	FSM	ENSMUSG00000029063.17	ENSMUST00000105613.10	3152	12	8	12	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155648164	155675446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155648437_155661449_155661655_155663767_155663852_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029063.17_45	chr4	+	2718	10	FSM	ENSMUSG00000029063.17	ENSMUST00000105612.2	2737	10	7	12	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTGAGTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	155666958	155675446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155667106_155668593_155668724_155669608_155669718_155669820_155669907_155671185_155671289_155671813_155671954_155672141_155672242_155672317_155672476_155673066_155673150_155673784
ENSMUSG00000029064.16_0	chr4	+	3008	10	FSM	ENSMUSG00000029064.16	ENST00000615252.4	3018	10	4	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGACTCTGGTGTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	155575798	155643721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029064.16_12	chr4	+	3113	12	FSM	ENSMUSG00000029064.16	ENSMUST00000030940.14	3131	12	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGACTCTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155575836	155643718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029064.16_23	chr4	+	2824	10	FSM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGGACTCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155611909	155643716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_33	chr4	+	2765	9	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	6246	8	6246	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGGACTCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155618155	155643716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_37	chr4	+	2730	8	ISM	ENSMUSG00000029064.16	ENSMUST00000176637.2	2832	10	7903	8	7903	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGGACTCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155619812	155643716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_4	chr4	+	3128	12	FSM	ENSMUSG00000029064.16	ENSMUST00000165335.8	3143	12	7	8	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGACTCTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155575824	155643718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155576038_155600087_155600137_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641924
ENSMUSG00000029064.16_7	chr4	+	3069	11	FSM	ENSMUSG00000029064.16	ENSMUST00000105616.10	3088	11	11	8	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGGACTCTGGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	155575831	155643718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155576038_155611869_155611967_155618153_155618193_155619814_155619922_155625012_155625077_155627487_155627651_155636111_155636179_155637774_155637977_155639471_155639689_155641627_155641744_155641927
ENSMUSG00000029066.13_0	chr4	+	753	4	FSM	ENSMUSG00000029066.13	ENSMUST00000030942.13	764	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTGAGTTATTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	155887986	155893286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155888200_155888289_155888401_155891364_155891443_155892935
ENSMUSG00000029068.17_0	chr4	+	2429	11	FSM	ENSMUSG00000029068.17	ENSMUST00000030944.11	2442	11	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTCTGTGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	155896958	155909000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155897267_155897624_155897700_155897915_155898026_155899699_155899821_155902379_155902445_155904785_155904886_155905240_155905346_155905429_155905572_155906268_155906378_155906461_155906555_155907799
ENSMUSG00000029070.10_0	chr4	+	1123	6	FSM	ENSMUSG00000029070.10	ENST00000342753.8	1137	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGTGGATCTGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	155924142	155927574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155924352_155925882_155926004_155926118_155926590_155927013_155927200_155927361_155927439_155927515
ENSMUSG00000029070.10_12	chr4	+	2185	10	FSM	ENSMUSG00000029070.10	ENSMUST00000030947.4	2203	10	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	4105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGATTTTTAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155924192	155928537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155924348_155925234_155925256_155925362_155925666_155925901_155926004_155926118_155926590_155927013_155927173_155927249_155927290_155927361_155927439_155927515_155927597_155927761
ENSMUSG00000029071.17_0	chr4	+	3336	15	FSM	ENSMUSG00000029071.17	ENSMUST00000030948.16	3358	15	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTGATGTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	155931874	155943754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155932362_155937874_155937945_155938093_155938216_155938439_155938544_155938786_155938926_155939022_155939117_155939187_155939258_155939342_155939483_155939560_155939638_155939728_155939797_155939923_155940077_155940588_155940721_155940818_155940987_155941070_155941278_155942449
ENSMUSG00000029073.10_0	chr4	-	2654	3	FSM	ENSMUSG00000029073.10	ENSMUST00000030950.8	2662	3	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACAGATCCATGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	155953891	155949181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155951343_155951569_155951795_155953623
ENSMUSG00000029074.15_0	chr4	-	1169	9	ISM	ENSMUSG00000029074.15	ENST00000379290.6	1227	10	200	2	200	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACGGACTTGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	156131656	156119815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_156119909_156120202_156120297_156120593_156120711_156127503_156127645_156128082_156128255_156129173_156129348_156129781_156129933_156131353_156131468_156131543
ENSMUSG00000029074.15_1	chr4	-	1225	10	FSM	ENSMUSG00000029074.15	ENST00000379290.6	1227	10	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTACGGACTTGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	156131856	156119815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156119909_156120202_156120297_156120593_156120711_156127503_156127645_156128082_156128255_156129173_156129348_156129781_156129933_156131353_156131468_156131543_156131663_156131806
ENSMUSG00000029076.15_15	chr4	+	1636	7	FSM	ENSMUSG00000029076.15	ENSMUST00000105578.2	1654	7	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCTTGGGATGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	156077851	156094775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156078027_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_16	chr4	+	1453	7	FSM	ENSMUSG00000029076.15	ENST00000360001.12	1472	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATCAGCCCCACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	156080646	156094940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230_156094492_156094663
ENSMUSG00000029076.15_7	chr4	+	1651	8	FSM	ENSMUSG00000029076.15	ENSMUST00000105579.8	1670	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTATGTGTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	156077338	156094658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156077464_156077609_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029076.15_9	chr4	+	5165	7	FSM	ENSMUSG00000029076.15	ENSMUST00000050078.13	5177	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCTGTGTGCACGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156077377	156098065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156077792_156080645_156080976_156083854_156083992_156085126_156085241_156093243_156093403_156093600_156093777_156094230
ENSMUSG00000029089.9_0	chr5	+	1600	9	FSM	ENSMUSG00000029089.9	ENSMUST00000030968.7	1616	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATATTGTAGTTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	48529681	48546182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_48529838_48531521_48531590_48531725_48531881_48532884_48532953_48534416_48534508_48536671_48536807_48537465_48537574_48539128_48539210_48545444
ENSMUSG00000029090.13_0	chr5	-	4466	19	FSM	ENSMUSG00000029090.13	ENSMUST00000030971.7	4480	19	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGAAGTTTGTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	50216345	50117308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_50118857_50118989_50119086_50121032_50121179_50128031_50128156_50129292_50129418_50136284_50136494_50136701_50136916_50144815_50145020_50147466_50147629_50155556_50155713_50156474_50156677_50159196_50159362_50164090_50164305_50166677_50166839_50168832_50168905_50170734_50170807_50174168_50174241_50183048_50183121_50215893
ENSMUSG00000029092.10_0	chr5	-	1022	6	FSM	ENSMUSG00000029092.10	ENSMUST00000198493.2	1032	6	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACCACAAAACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45333033	45267978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45268181_45268993_45269105_45312239_45312408_45320641_45320800_45326707_45326945_45332887
ENSMUSG00000029093.15_0	chr5	-	5678	27	FSM	ENSMUSG00000029093.15	ENSMUST00000037370.14	5707	27	16	13	16	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAGGTTAAATCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	36555452	36174536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36176737_36178572_36178677_36181335_36181439_36181910_36182011_36183163_36183290_36184002_36184116_36185205_36185330_36186395_36186530_36188495_36188683_36193040_36193213_36194749_36194879_36195464_36195599_36196654_36196776_36199435_36199544_36200786_36200879_36203825_36203903_36205144_36205248_36207791_36207939_36213313_36213494_36219881_36219972_36222682_36222802_36225431_36225497_36228669_36228744_36235217_36235383_36311166_36311267_36386488_36386557_36554909
ENSMUSG00000029093.15_2	chr5	-	2068	4	FSM	ENSMUSG00000029093.15	ENSMUST00000070720.8	2089	4	16	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTATACAAAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36555467	36307551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36308894_36311166_36311267_36386488_36386557_36554909
ENSMUSG00000029094.13_0	chr5	+	6609	17	FSM	ENSMUSG00000029094.13	ENSMUST00000064571.11	6618	17	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTGAGTCGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	36050670	36161266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_36050885_36092895_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36146897_36147013_36150884_36151050_36153300_36153492_36154861_36155027_36157042
ENSMUSG00000029094.13_1	chr5	+	2428	16	FSM	ENSMUSG00000029094.13	ENST00000420658.6	2441	16	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGACCCCTGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36092902	36155023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_36093025_36093381_36093477_36102531_36102641_36105378_36105591_36108198_36108379_36119089_36119192_36119548_36119631_36125913_36126064_36131731_36131944_36133835_36133982_36141532_36141651_36144398_36144666_36146897_36147013_36150884_36151050_36153300_36153492_36154861
ENSMUSG00000029095.18_0	chr5	+	2609	15	FSM	ENSMUSG00000029095.18	ENST00000361737.9	2623	15	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTGGCCTAGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	35955807	36041802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35955941_35959703_35959888_35964382_35964499_35966526_35966654_35969469_35969564_35981368_35981457_35985467_35985527_35990396_35990475_35994291_35994442_35997133_35997167_35998624_35998746_36014471_36014525_36015169_36015309_36032176_36032258_36040649
ENSMUSG00000029096.16_0	chr5	-	2728	9	FSM	ENSMUSG00000029096.16	ENSMUST00000087629.10	2750	9	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAGAAGTGTTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	35837114	35809376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35810467_35811414_35811511_35812887_35812937_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
ENSMUSG00000029096.16_1	chr5	-	1892	7	FSM	ENSMUSG00000029096.16	ENSMUST00000114233.3	1901	7	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAACCCTGCTAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	35836814	35818909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35819609_35821306_35821422_35822757_35822791_35823393_35823589_35825526_35825750_35828375_35828476_35836287
ENSMUSG00000029097.12_0	chr5	-	3772	11	FSM	ENSMUSG00000029097.12	ENSMUST00000030980.12	3790	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCAATTTAATAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	35732402	35713552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35715400_35719835_35719953_35721366_35721800_35722704_35722889_35723765_35723873_35726104_35726177_35727214_35727323_35728387_35728457_35730046_35730267_35731423_35731539_35731902
ENSMUSG00000029098.18_11	chr5	+	1828	14	ISM	ENSMUSG00000029098.18	ENST00000356406.10	1909	15	384	2	384	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAAGGGGAATGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	35745962	35767164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765800_35767043
ENSMUSG00000029098.18_3	chr5	+	1902	15	FSM	ENSMUSG00000029098.18	ENST00000356406.10	1909	15	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTAAGGGGAATGCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	35745582	35767163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35745658_35745962_35746197_35746519_35746595_35747037_35747128_35749419_35749564_35751653_35751743_35755658_35755756_35757035_35757219_35758846_35758970_35760264_35760386_35761957_35762081_35762550_35762665_35764425_35764542_35765601_35765800_35767043
ENSMUSG00000029101.17_0	chr5	+	5459	17	FSM	ENSMUSG00000029101.17	ENSMUST00000030984.14	5472	17	2	11	2	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTAAAATTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35106790	35190928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35106869_35122116_35124100_35132560_35132678_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029101.17_17	chr5	+	3609	15	FSM	ENSMUSG00000029101.17	ENSMUST00000114284.8	3624	15	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCACCACTGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	35146735	35190779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35147213_35156551_35156574_35176686_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029101.17_4	chr5	+	4081	15	FSM	ENSMUSG00000029101.17	ENST00000336727.7	4099	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCAGGTACCTCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	35122259	35189770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35124100_35132560_35132678_35176663_35176857_35177657_35177751_35178459_35178604_35179935_35180116_35180372_35180527_35181620_35181698_35183192_35183388_35183671_35183746_35184206_35184334_35185879_35185977_35187354_35187435_35187811_35187966_35189214
ENSMUSG00000029103.17_0	chr5	-	2966	8	FSM	ENSMUSG00000029103.17	ENSMUST00000030986.15	2981	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTCTGGGGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	35263101	35248850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35250731_35252193_35252371_35253319_35253403_35254874_35255034_35255496_35255618_35256500_35256623_35259738_35259884_35262822
ENSMUSG00000029104.16_0	chr5	+	13209	67	FSM	ENSMUSG00000029104.16	ENSMUST00000080036.3	13215	67	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCTTGCTTTACTTATA	NA	NA	NA	NA	NA	NA	NA	NA	34919093	35069878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34919454_34940085_34940170_34947610_34947732_34951448_34951509_34953235_34953316_34956720_34956860_34961061_34961204_34961845_34962025_34963916_34964122_34965212_34965261_34968778_34968860_34970195_34970537_34974486_34974614_34975041_34975161_34975942_34976055_34976240_34976379_34977294_34977454_34977545_34977644_34979054_34979195_34981204_34981269_34981701_34981803_34982158_34982306_34983290_34983412_34984598_34984676_34985816_34985969_34987020_34987224_34989910_34990038_34991604_34991733_35000134_35000246_35003333_35003412_35004797_35005022_35006074_35006154_35006280_35006443_35008562_35008619_35009426_35009576_35010103_35010241_35012018_35012136_35021589_35021713_35021989_35022223_35023918_35024062_35028053_35028262_35033249_35033392_35034073_35034254_35034368_35034546_35034771_35034849_35036146_35036286_35037147_35037271_35040193_35040408_35041315_35041462_35042695_35042874_35043848_35043945_35046673_35046862_35048694_35048822_35051688_35051790_35052682_35052838_35053227_35053368_35054231_35054315_35055872_35056004_35056140_35056271_35057115_35057272_35060552_35060744_35062657_35062773_35062874_35063089_35063442_35063549_35064427_35064591_35064776_35064938_35065975
ENSMUSG00000029106.15_0	chr5	+	3990	16	FSM	ENSMUSG00000029106.15	ENSMUST00000114338.9	4007	16	15	2	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34731022	34789650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ENSMUSG00000029106.15_2	chr5	+	3898	16	FSM	ENSMUSG00000029106.15	ENSMUST00000001108.11	3898	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTTGGGGGCAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34731206	34789649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774252_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34786479_34786517_34787813
ENSMUSG00000029106.15_21	chr5	+	3709	14	ISM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	27460	2	-9	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34758676	34789650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_4	chr5	+	3759	15	FSM	ENSMUSG00000029106.15	ENSMUST00000114340.9	3761	15	0	2	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTGGGGGCAACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34731216	34789650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34731258_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34782622_34782780_34785758_34785858_34787813
ENSMUSG00000029106.15_8	chr5	+	4524	18	FSM	ENSMUSG00000029106.15	ENSMUST00000114335.8	4547	18	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTCCTTGTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	34731403	34789633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34731969_34752912_34753050_34758667_34758883_34762033_34762197_34763171_34763324_34767535_34767617_34767833_34767984_34770631_34770776_34770862_34770962_34771527_34771705_34773906_34774159_34776693_34776796_34777388_34777479_34778175_34778263_34782622_34782780_34785758_34785858_34786482_34786517_34787813
ENSMUSG00000029108.15_15	chr5	+	3747	3	NNC	ENSMUSG00000029108.15	novel	3752	3	NA	NA	4	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTGTCAAGGAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	57876442	58286691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_57879621_58070497_58070691_58286315
ENSMUSG00000029108.15_9	chr5	+	5604	2	FSM	ENSMUSG00000029108.15	ENSMUST00000068110.10	5611	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATCGTTTGCCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	57875361	57886800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_57879621_57885455
ENSMUSG00000029110.14_0	chr5	+	3017	7	NIC	ENSMUSG00000029110.14	novel	3046	8	NA	NA	10	6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGTATCTTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34493642	34510774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_1	chr5	+	3030	8	FSM	ENSMUSG00000029110.14	ENSMUST00000182709.8	3046	8	7	9	7	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGTATCTTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	34493639	34510774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34493886_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_14	chr5	+	2876	8	FSM	ENSMUSG00000029110.14	ENSMUST00000030992.13	2895	8	11	8	11	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTAAGTATCTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	34493734	34510772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34506893_34506904_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029110.14_15	chr5	+	2855	7	NIC	ENSMUSG00000029110.14	novel	2895	8	NA	NA	18	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAACTAAGTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	34493741	34510768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_34493829_34499865_34500024_34504118_34504246_34506007_34506088_34507255_34507416_34508133_34508183_34508574
ENSMUSG00000029111.8_0	chr5	-	2562	11	FSM	ENSMUSG00000029111.8	ENSMUST00000030993.8	2580	11	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACGATTTTCCACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34093745	34055265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34056254_34056355_34056456_34056625_34056898_34057756_34057869_34058534_34058624_34058931_34059002_34059088_34059220_34060714_34060805_34077835_34077998_34079189_34079362_34093369
ENSMUSG00000029119.10_0	chr5	-	3322	19	FSM	ENSMUSG00000029119.10	ENSMUST00000031002.10	3330	19	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCCATGTTCAAGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	36987989	36964264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36964555_36965129_36965248_36966347_36966461_36967635_36967753_36970290_36970505_36970612_36970724_36971075_36971323_36971672_36971865_36972662_36972938_36973402_36973588_36974899_36975042_36975805_36975997_36978225_36978425_36979180_36979359_36981435_36981552_36983383_36983557_36985207_36985314_36986971_36987119_36987781
ENSMUSG00000029121.17_0	chr5	+	3070	14	FSM	ENSMUSG00000029121.17	ENST00000324989.12	3081	14	5	6	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGAGTGGGTGTTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	37399407	37449476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_37399870_37422575_37422665_37426026_37426212_37430690_37430856_37433620_37433683_37435428_37435510_37436206_37436276_37437002_37437128_37437810_37437968_37440195_37440338_37441371_37441543_37443711_37443892_37446148_37446315_37448460
ENSMUSG00000029122.12_0	chr5	-	4317	21	FSM	ENSMUSG00000029122.12	ENSMUST00000031005.11	4325	21	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTTGTTCTTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37494234	37456518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_37457845_37458155_37458268_37458901_37458996_37460528_37460656_37464556_37464669_37466375_37466521_37467504_37467712_37468875_37469087_37470772_37470883_37471702_37471916_37473668_37473768_37475506_37475656_37476232_37476450_37477579_37477739_37479393_37479532_37481042_37481142_37482180_37482266_37483681_37483930_37485805_37485890_37490235_37490362_37493978
ENSMUSG00000029123.9_0	chr5	-	3447	12	FSM	ENSMUSG00000029123.9	ENSMUST00000094836.6	3458	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTCAGATGTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	37874515	37604179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_37606136_37612278_37612344_37614465_37614598_37616945_37617072_37618693_37618811_37624079_37624184_37647804_37647895_37656332_37656371_37688888_37689063_37786202_37786355_37806434_37806491_37874078
ENSMUSG00000029125.15_1	chr5	+	2992	11	FSM	ENSMUSG00000029125.15	ENSMUST00000114126.9	3002	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGATTGTGGACTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	38196095	38295109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293606
ENSMUSG00000029125.15_5	chr5	+	1448	11	FSM	ENSMUSG00000029125.15	ENSMUST00000031008.13	1471	11	14	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACAGCCACTTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	38196590	38294152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38196844_38249856_38249925_38262221_38262338_38263907_38263986_38264169_38264237_38273428_38273542_38278554_38278644_38284275_38284335_38285387_38285458_38292565_38292647_38293698
ENSMUSG00000029126.8_0	chr5	-	2560	5	FSM	ENSMUSG00000029126.8	ENSMUST00000031009.8	2581	5	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCGCACACTGGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	38317238	38294543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38296217_38302052_38302164_38312951_38313069_38316220_38316376_38316734
ENSMUSG00000029127.16_0	chr5	-	2973	8	FSM	ENSMUSG00000029127.16	ENSMUST00000094833.10	2978	8	5	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGCTCAGTTTCTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	38377796	38357423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38358658_38360839_38361002_38361088_38361172_38363232_38363307_38367961_38368009_38370651_38371728_38373790_38373958_38377666
ENSMUSG00000029127.16_1	chr5	-	2627	3	FSM	ENSMUSG00000029127.16	ENSMUST00000114113.3	2645	3	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCATCTGTGAGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	38377781	38369382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38371728_38373790_38373958_38377666
ENSMUSG00000029128.13_0	chr5	-	1612	7	FSM	ENSMUSG00000029128.13	ENSMUST00000031011.12	1635	7	13	10	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATATGTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41865484	41782328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_41783206_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUSG00000029128.13_1	chr5	-	1687	8	FSM	ENSMUSG00000029128.13	ENSMUST00000201422.4	1697	8	0	10	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAATATGTTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41865464	41782328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41845063_41845194_41855732_41855822_41860780_41860878_41865247
ENSMUSG00000029128.13_2	chr5	-	1599	7	FSM	ENSMUSG00000029128.13	ENST00000630951.1	1621	7	11	11	-10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATTTAAAATATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	41865510	41782332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_41783206_41784329_41784425_41790515_41790594_41793148_41793253_41855732_41855822_41860780_41860878_41865247
ENSMUSG00000029130.13_0	chr5	+	1589	10	FSM	ENSMUSG00000029130.13	ENSMUST00000001247.12	1600	10	7	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATGTAGCTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29401001	29430516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29401111_29401577_29401644_29402923_29403019_29403571_29403837_29408052_29408196_29410666_29410700_29411171_29411297_29411693_29411803_29429114_29429283_29430040
ENSMUSG00000029131.15_0	chr5	+	2898	10	FSM	ENSMUSG00000029131.15	ENSMUST00000008733.15	2918	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATTTATTTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29940697	29991468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322_29971394_29986127_29986449_29990028
ENSMUSG00000029131.15_16	chr5	+	1012	7	FSM	ENSMUSG00000029131.15	ENSMUST00000012734.10	1024	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCACCATGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	29940997	29962960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29961231_29961337_29962545
ENSMUSG00000029131.15_6	chr5	+	1595	8	FSM	ENSMUSG00000029131.15	ENSMUST00000114839.8	1605	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTTGTGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	29940947	29972101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29941115_29953342_29953434_29955935_29956046_29957394_29957458_29958539_29958651_29969396_29969529_29970503_29970646_29971322
ENSMUSG00000029135.11_0	chr5	+	6514	4	FSM	ENSMUSG00000029135.11	ENSMUST00000031017.11	6537	4	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAGAACAAAGAGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	32293152	32315171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_32294150_32304168_32304421_32307764_32307873_32310014
ENSMUSG00000029136.10_0	chr5	-	1005	8	FSM	ENSMUSG00000029136.10	ENSMUST00000031018.10	1042	8	25	12	25	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAATGCACATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	31854946	31781794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31782001_31805064_31805254_31809152_31809245_31817250_31817416_31823062_31823126_31824204_31824269_31830656_31830790_31854853
ENSMUSG00000029141.17_0	chr5	+	2446	14	FSM	ENSMUSG00000029141.17	ENST00000326019.10	2503	14	44	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATGTAAAAAAAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	31684344	31711325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31685029_31685386_31685583_31687976_31688100_31689316_31689378_31689787_31689928_31691388_31691550_31692201_31692272_31693481_31693669_31697729_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ENSMUSG00000029141.17_50	chr5	+	598	6	FSM	ENSMUSG00000029141.17	ENST00000419995.2	606	6	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTGGCTCAGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31697757	31711127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31697842_31701013_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ENSMUSG00000029141.17_52	chr5	+	515	5	ISM	ENSMUSG00000029141.17	ENST00000419995.2	606	6	3258	5	3258	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTGGCTCAGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	31701012	31711127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_31701258_31703523_31703611_31705957_31706026_31708056_31708127_31711082
ENSMUSG00000029145.13_0	chr5	-	2009	13	FSM	ENSMUSG00000029145.13	ENSMUST00000077693.10	2025	13	12	4	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTCTGCTGCCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31350762	31344905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31349970_31350336
ENSMUSG00000029145.13_1	chr5	-	1867	13	FSM	ENSMUSG00000029145.13	ENSMUST00000166769.8	1878	13	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTCTGCTGCCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	31350475	31344905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925_31350115_31350336
ENSMUSG00000029145.13_8	chr5	-	1949	12	FSM	ENSMUSG00000029145.13	ENSMUST00000114603.8	1966	12	10	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCCTACTCCCATGACTC	NA	NA	NA	NA	NA	NA	NA	NA	31350348	31344918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31345145_31345257_31345439_31346912_31347091_31347224_31347353_31347702_31347806_31347925_31348003_31348180_31348296_31348492_31348585_31348708_31348792_31348884_31349092_31349496_31349633_31349925
ENSMUSG00000029146.15_0	chr5	+	2296	14	FSM	ENSMUSG00000029146.15	ENST00000537606.5	2312	14	10	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGCAGGAGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	31350577	31356604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31350810_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029146.15_3	chr5	+	2007	15	FSM	ENSMUSG00000029146.15	ENSMUST00000031029.15	2018	15	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGGTTCCCTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	31350580	31356243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31350810_31351212_31351288_31352139_31352258_31352758_31352824_31353089_31353201_31353294_31353386_31353520_31353609_31353824_31353895_31354326_31354420_31354513_31354718_31354964_31355091_31355206_31355285_31355413_31355489_31355579_31355622_31355701
ENSMUSG00000029147.12_0	chr5	-	1841	10	FSM	ENSMUSG00000029147.12	ENSMUST00000202294.4	1868	10	21	6	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGTGCTCATAGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	31377888	31360013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363477_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ENSMUSG00000029147.12_2	chr5	-	2285	10	FSM	ENSMUSG00000029147.12	ENSMUST00000031032.11	2307	10	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAGCTAATCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31378022	31360024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31360629_31360915_31361019_31361373_31361504_31361796_31362032_31362341_31362474_31363381_31363798_31364906_31365040_31365356_31365443_31365730_31365801_31377646
ENSMUSG00000029148.16_0	chr5	+	2211	19	FSM	ENSMUSG00000029148.16	ENSMUST00000202576.4	2221	19	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31398217	31408904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31403665_31403690_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029148.16_1	chr5	+	2185	18	FSM	ENSMUSG00000029148.16	ENSMUST00000031034.12	2203	18	12	6	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCATCTTGTGTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31398219	31408904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31398347_31401106_31401336_31401509_31401633_31401801_31401904_31402220_31402311_31402706_31402748_31403094_31403190_31404685_31404770_31405027_31405087_31405241_31405341_31406892_31407026_31407232_31407339_31407433_31407485_31407573_31407710_31407887_31407942_31408024_31408089_31408235_31408292_31408368
ENSMUSG00000029149.15_0	chr5	+	803	6	FSM	ENSMUSG00000029149.15	ENST00000543753.5	813	6	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAGGCAGAGCCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	31409272	31412150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31409448_31409535_31409596_31409708_31409916_31409998_31410134_31410238_31410352_31412037
ENSMUSG00000029151.15_0	chr5	-	2078	8	FSM	ENSMUSG00000029151.15	ENSMUST00000031037.14	2089	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTTCTGCAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	31250955	31243456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31244263_31245300_31245436_31245648_31245755_31245951_31246151_31246662_31246817_31246897_31247045_31247399_31247582_31250606
ENSMUSG00000029152.14_1	chr5	+	1499	9	FSM	ENSMUSG00000029152.14	ENSMUST00000031038.11	1523	9	12	12	-3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACACAGTAATAGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	73450146	73471400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73450320_73451627_73451691_73452268_73452350_73458006_73458061_73460934_73460983_73461891_73462028_73463920_73464097_73467616_73467770_73470785
ENSMUSG00000029153.12_0	chr5	-	2541	7	FSM	ENSMUSG00000029153.12	ENSMUST00000087195.9	2554	7	5	8	5	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCAATACGCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	73496330	73479549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_73481191_73483623_73483742_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029153.12_2	chr5	-	2362	6	FSM	ENSMUSG00000029153.12	ENSMUST00000201908.4	2378	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAAGGCAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	73496283	73479563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_73481191_73485005_73485054_73486609_73486664_73489446_73489544_73493162_73493289_73495873
ENSMUSG00000029156.12_0	chr5	-	3776	6	FSM	ENSMUSG00000029156.12	ENSMUST00000081170.9	3786	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGTTTCTTCGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	73805123	73790091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_73793042_73796725_73796858_73797131_73797324_73798025_73798212_73801614_73801825_73805017
ENSMUSG00000029161.8_0	chr5	-	1428	6	FSM	ENSMUSG00000029161.8	ENSMUST00000031051.8	1442	6	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCATGTGTCCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	31102924	31090489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093325_31102701
ENSMUSG00000029161.8_2	chr5	-	894	6	ISM	ENSMUSG00000029161.8	ENST00000402394.6	921	7	10	421	10	-421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGAGGAACAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31102875	31090968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_31091333_31091503_31091626_31091722_31091794_31091886_31091953_31093221_31093319_31102701
ENSMUSG00000029162.16_0	chr5	+	1569	8	FSM	ENSMUSG00000029162.16	ENSMUST00000201621.4	1583	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31078781	31088585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31079352_31082082_31082200_31084365_31084501_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ENSMUSG00000029162.16_5	chr5	+	1227	8	FSM	ENSMUSG00000029162.16	ENST00000260599.10	1243	8	11	5	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	31079127	31088589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31079352_31082082_31082200_31084031_31084167_31085786_31085860_31086864_31087012_31087891_31087981_31088059_31088218_31088305
ENSMUSG00000029163.10_0	chr5	+	3837	8	FSM	ENSMUSG00000029163.10	ENSMUST00000031055.8	3852	8	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACATAGCTATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	31070752	31078613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31071389_31072325_31072452_31072860_31073082_31074277_31076204_31076599_31076717_31077274_31077293_31077423_31077562_31077958
ENSMUSG00000029165.18_0	chr5	+	3579	16	FSM	ENSMUSG00000029165.18	ENSMUST00000201917.4	3579	16	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACATGGAAATAAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	31046278	31064309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062452_31062500_31062974_31063106_31063459
ENSMUSG00000029165.18_1	chr5	+	3185	15	FSM	ENSMUSG00000029165.18	ENSMUST00000201168.4	3199	15	7	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCAGGTGTAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31046319	31064003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31046426_31047463_31047725_31047942_31048115_31048403_31048568_31049156_31049335_31049781_31049961_31050348_31050806_31051244_31051415_31051718_31051855_31052340_31052544_31053109_31053325_31060396_31060553_31062046_31062160_31062974_31063106_31063459
ENSMUSG00000029165.18_4	chr5	+	1058	3	NNC	ENSMUSG00000029165.18	novel	3199	15	NA	NA	16879	737	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCGAGGTAGGCGACCT	NA	NA	NA	NA	NA	NA	NA	NA	31063228	31065046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_31064110_31064741_31064883_31065010
ENSMUSG00000029166.15_0	chr5	+	2003	7	FSM	ENSMUSG00000029166.15	ENSMUST00000031058.15	2021	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATAGCACCTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30971991	31023439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020750_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_2	chr5	+	1802	7	FSM	ENSMUSG00000029166.15	ENSMUST00000200692.4	1816	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATGATTTCCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	30972109	31023401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30972243_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029166.15_3	chr5	+	974	7	FSM	ENSMUSG00000029166.15	ENST00000402218.1	992	7	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCCAGCCCTGGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	31011242	31022543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31011406_31019150_31019279_31019841_31019988_31020547_31020705_31021917_31022073_31022158_31022312_31022471
ENSMUSG00000029167.14_0	chr5	-	3159	12	FSM	ENSMUSG00000029167.14	ENST00000613098.4	3178	12	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCTATACAAAAGGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	51701952	51615027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_51615626_51620047_51620200_51620547_51620670_51629939_51630061_51630220_51630326_51630837_51631754_51647358_51647433_51647541_51647588_51651942_51652148_51653011_51653138_51655375_51655571_51701453
ENSMUSG00000029168.15_0	chr5	+	3230	13	NNC	ENSMUSG00000029168.15	novel	3250	13	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTCACTCGGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30902575	30956705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580_30954347_30955844
ENSMUSG00000029168.15_1	chr5	+	3241	13	FSM	ENSMUSG00000029168.15	ENST00000288699.11	3250	13	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCGGCCTCTGTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	30902573	30956712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30902831_30934663_30934823_30935318_30935499_30936211_30936281_30938822_30938868_30940538_30940615_30941654_30941812_30946042_30946185_30948835_30948979_30949463_30949672_30951277_30951447_30953580_30954349_30955844
ENSMUSG00000029169.12_0	chr5	-	2995	14	FSM	ENSMUSG00000029169.12	ENSMUST00000031061.12	3010	14	13	2	-12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTCTGTATCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	52347843	52307546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_52308121_52309151_52309322_52311378_52311570_52314796_52314920_52317571_52317764_52318234_52318344_52318928_52319079_52319870_52319958_52324042_52324211_52327262_52327482_52328765_52328926_52338323_52338518_52341809_52342246_52347621
ENSMUSG00000029171.13_0	chr5	+	2348	14	FSM	ENSMUSG00000029171.13	ENSMUST00000087324.7	2369	14	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGCTAATAAGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	64250306	64285687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64250432_64254321_64254490_64258289_64258397_64260196_64260282_64260719_64260804_64261056_64261251_64263097_64263288_64263950_64264049_64265011_64265193_64265512_64265607_64267858_64267989_64269350_64269541_64273642_64273777_64285119
ENSMUSG00000029173.13_0	chr5	-	5229	11	FSM	ENSMUSG00000029173.13	ENSMUST00000031069.13	5252	11	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATCTACACTGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	52827037	52797438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_52801450_52804457_52804549_52804939_52805034_52813355_52813448_52813567_52813698_52817971_52818075_52821509_52821664_52822577_52822737_52823329_52823449_52826240_52826396_52826916
ENSMUSG00000029174.19_0	chr5	+	6462	22	FSM	ENSMUSG00000029174.19	ENSMUST00000043893.13	6471	22	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	64316796	64508823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64441309_64441469_64442032_64442153_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUSG00000029174.19_4	chr5	+	5411	21	FSM	ENSMUSG00000029174.19	ENSMUST00000121370.8	5419	21	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	64317162	64508821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64317199_64317602_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUSG00000029174.19_5	chr5	+	5387	20	FSM	ENSMUSG00000029174.19	ENSMUST00000101195.9	5432	20	37	8	37	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTCTTCGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	64317590	64508821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64317849_64330730_64331240_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUSG00000029174.19_8	chr5	+	4744	19	FSM	ENSMUSG00000029174.19	ENSMUST00000119756.6	4760	19	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTCTTCGTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	64387751	64508823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64387874_64414057_64414499_64417695_64417786_64420811_64420923_64421668_64421802_64428432_64428525_64432737_64432849_64435258_64435388_64436673_64436761_64439107_64439389_64443287_64443428_64468401_64468588_64473696_64473859_64481793_64481953_64490689_64490935_64492620_64492781_64496904_64497075_64502594_64502769_64507072
ENSMUSG00000029175.18_0	chr5	+	3073	6	FSM	ENSMUSG00000029175.18	ENSMUST00000062962.12	3088	6	10	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAGACATTTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	30805286	30817068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30805443_30812091_30812165_30812838_30813011_30813231_30813445_30814090_30814202_30814720
ENSMUSG00000029176.14_0	chr5	+	3839	28	FSM	ENSMUSG00000029176.14	ENSMUST00000031072.14	3854	28	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCACCTAGCGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52991361	53025132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52991735_52993019_52993126_52996963_52997097_52999057_52999133_52999246_52999274_52999365_52999411_53000162_53000248_53000828_53000934_53002665_53002750_53003973_53004061_53005332_53005398_53005935_53005979_53006096_53006174_53007799_53007901_53007984_53008037_53012925_53012982_53013185_53013233_53014149_53014207_53014512_53014570_53016454_53016549_53018584_53018683_53019290_53019353_53019432_53019472_53019563_53019666_53020928_53021004_53021820_53021995_53023235_53023360_53023736
ENSMUSG00000029177.10_0	chr5	+	1448	5	FSM	ENSMUSG00000029177.10	ENSMUST00000144742.6	1466	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAAGAATTGAAGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	30824128	30832164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30824458_30829807_30829915_30830325_30830404_30830636_30830788_30831381
ENSMUSG00000029178.15_0	chr5	+	5201	6	FSM	ENSMUSG00000029178.15	ENSMUST00000165536.8	5221	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTACACATAATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	64960743	64990237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64961135_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUSG00000029178.15_3	chr5	+	1543	6	NIC	ENSMUSG00000029178.15	novel	1562	6	NA	NA	9	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATGTAAACTAACGACCA	NA	NA	NA	NA	NA	NA	NA	NA	64969690	64986814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_64969847_64974077_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986319
ENSMUSG00000029178.15_5	chr5	+	977	5	FSM	ENSMUSG00000029178.15	ENST00000521506.1	984	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCTCTCGCTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	64974113	64986443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64974174_64979216_64979701_64980221_64980373_64984452_64984614_64986322
ENSMUSG00000029178.15_8	chr5	+	915	4	ISM	ENSMUSG00000029178.15	ENST00000521506.1	984	5	5106	6	5106	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTCTCTCGCTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	64979218	64986443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_64979701_64980221_64980373_64984452_64984614_64986322
ENSMUSG00000029179.15_0	chr5	+	2476	13	FSM	ENSMUSG00000029179.15	ENSMUST00000113904.9	2485	13	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTTTTTCAGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	52940400	52982003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52940557_52941330_52941450_52942439_52942523_52953318_52953595_52953923_52954002_52961720_52961794_52964298_52964450_52965601_52965703_52973142_52973265_52973503_52973580_52975948_52976001_52976462_52976608_52980959
ENSMUSG00000029185.15_0	chr5	+	2928	14	FSM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTGGCATTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	65127416	65199222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65127488_65137050_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029185.15_10	chr5	+	2855	13	ISM	ENSMUSG00000029185.15	ENSMUST00000031080.15	2938	14	9639	7	9639	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTGGCATTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	65137052	65199222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_65137407_65153157_65153246_65163140_65163255_65163376_65163487_65166330_65166466_65172658_65172812_65178944_65179069_65185752_65185845_65187407_65187570_65188597_65188738_65191714_65191788_65196030_65196085_65197966
ENSMUSG00000029186.13_0	chr5	+	3129	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031081.11	3139	10	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCATTGTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52898923	52926680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52899311_52905710_52905848_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029186.13_4	chr5	+	3028	10	FSM	ENSMUSG00000029186.13	ENSMUST00000031082.8	3034	10	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCCATTGTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	52898955	52926680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52899311_52900833_52900902_52907949_52908151_52908763_52908896_52910437_52910592_52911978_52912047_52914207_52914308_52918215_52918350_52919773_52919834_52924924
ENSMUSG00000029189.11_0	chr5	-	4491	24	FSM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	13	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTTGACTACCAGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53370781	53264432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383_53301525_53302776_53302897_53311512_53311693_53312894_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242_53357814_53370471
ENSMUSG00000029189.11_7	chr5	-	3368	23	ISM	ENSMUSG00000029189.11	ENSMUST00000031090.8	4512	24	12993	809	13	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTTAAACAAGAACATAG	NA	NA	NA	NA	NA	NA	NA	NA	53357801	53265233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_53265517_53273504_53273578_53273663_53273767_53274380_53274509_53279091_53279202_53280508_53280594_53280727_53280819_53289135_53289220_53293114_53293243_53295127_53295305_53297149_53297213_53301383_53301525_53302776_53302897_53311512_53311693_53312894_53313107_53327698_53327840_53329915_53330049_53332078_53332212_53339063_53339123_53342105_53342222_53343293_53343416_53345297_53345425_53357242
ENSMUSG00000029190.20_0	chr5	-	6579	8	ISM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	22695	15	22695	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTCAAAAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36830586	36757843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091
ENSMUSG00000029190.20_1	chr5	-	6654	9	FSM	ENSMUSG00000029190.20	ENSMUST00000031091.13	6677	9	4	19	4	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATTTCAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36853277	36757847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36760148_36761854_36761953_36765281_36765391_36770589_36773879_36776086_36776169_36777007_36777075_36787000_36787136_36830091_36830587_36853198
ENSMUSG00000029190.20_3	chr5	-	1997	2	FSM	ENSMUSG00000029190.20	ENSMUST00000140653.2	2014	2	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTTAAATTTATTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36853360	36828751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36830587_36853198
ENSMUSG00000029191.17_1	chr5	-	4729	25	FSM	ENSMUSG00000029191.17	ENSMUST00000204965.3	4751	25	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAGCGTACTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65492999	65419202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUSG00000029191.17_2	chr5	-	4681	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203581.3	4689	25	0	8	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGCGTACTGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65492907	65419200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459396_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUSG00000029191.17_20	chr5	-	3929	25	FSM	ENSMUSG00000029191.17	ENSMUST00000203471.3	3952	25	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCAAAGCAGCTACCACC	NA	NA	NA	NA	NA	NA	NA	NA	65492949	65419955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65420493_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436167_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUSG00000029191.17_4	chr5	-	4688	25	FSM	ENSMUSG00000029191.17	ENSMUST00000172732.8	4699	25	3	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGAGCGTACTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	65492961	65419202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65420490_65421585_65421775_65423444_65423659_65426290_65426437_65429483_65429602_65429720_65429876_65431293_65431393_65431717_65431814_65432724_65432863_65433032_65433125_65434699_65434815_65436053_65436164_65436799_65437158_65442191_65442297_65445232_65445413_65448429_65448538_65451000_65451279_65453296_65453388_65454741_65454820_65459275_65459354_65460318_65460552_65468383_65468507_65470300_65470377_65476747_65476874_65492866
ENSMUSG00000029192.18_0	chr5	-	4585	14	FSM	ENSMUSG00000029192.18	ENSMUST00000031094.15	4590	14	0	5	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36739741	36647952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739698
ENSMUSG00000029192.18_1	chr5	-	4577	14	FSM	ENSMUSG00000029192.18	ENSMUST00000146430.8	4582	14	0	5	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36731669	36647952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36731634
ENSMUSG00000029192.18_2	chr5	-	4522	13	ISM	ENSMUSG00000029192.18	ENSMUST00000146430.8	4582	14	2308	5	2308	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36729361	36647952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639
ENSMUSG00000029192.18_3	chr5	-	4398	12	FSM	ENSMUSG00000029192.18	ENSMUST00000136189.8	4436	12	33	5	22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36739114	36647952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36650459_36652361_36652621_36662368_36662452_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36700520_36700642_36728639_36729382_36739030
ENSMUSG00000029192.18_5	chr5	-	4084	13	FSM	ENSMUSG00000029192.18	ENSMUST00000126077.8	4085	13	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATGTTCACTGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	36688946	36647952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766_36688149_36688923
ENSMUSG00000029192.18_6	chr5	-	4052	12	FSM	ENSMUSG00000029192.18	ENSMUST00000171385.8	3884	12	-181	13	-181	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTTACTTATGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	36688148	36647961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36650459_36652361_36652621_36662368_36662479_36664921_36665051_36665703_36665776_36669797_36669893_36671382_36671464_36676616_36676724_36677787_36677906_36680270_36680354_36682273_36682393_36687766
ENSMUSG00000029195.11_0	chr5	+	3475	6	FSM	ENSMUSG00000029195.11	ENST00000257408.5	3493	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTCTGGTTTCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	65505747	65582416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65506580_65529298_65529804_65533022_65533292_65536270_65537415_65540651_65541355_65582394
ENSMUSG00000029195.11_1	chr5	+	3447	5	FSM	ENSMUSG00000029195.11	ENSMUST00000031096.11	3540	5	97	-4	19	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTTAGACTTCGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	65505753	65541354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65506580_65529298_65529804_65533022_65533292_65536270_65537415_65540651
ENSMUSG00000029196.10_0	chr5	-	3750	2	FSM	ENSMUSG00000029196.10	ENSMUST00000031097.8	3791	2	33	8	33	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGAGTTGTGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36641596	36631021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36634307_36641131
ENSMUSG00000029198.4_0	chr5	+	3509	4	FSM	ENSMUSG00000029198.4	ENSMUST00000031099.4	3528	4	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTATATGCCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	36622350	36631414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_36622600_36626781_36626945_36627945_36628028_36628399
ENSMUSG00000029199.12_0	chr5	+	1652	11	FSM	ENSMUSG00000029199.12	ENSMUST00000122026.6	1668	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTATTTGCGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65548849	65566544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65549017_65549562_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029199.12_12	chr5	+	769	7	FSM	ENSMUSG00000029199.12	ENST00000261434.8	781	7	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTGTGAGGATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65549603	65566178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65549733_65552707_65552789_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029199.12_14	chr5	+	965	9	FSM	ENSMUSG00000029199.12	ENST00000340169.7	978	9	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGTGTGAGGATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65549604	65566178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65566077
ENSMUSG00000029199.12_5	chr5	+	2987	11	FSM	ENSMUSG00000029199.12	ENSMUST00000031101.10	2996	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCATGGCTGTCCATATC	NA	NA	NA	NA	NA	NA	NA	NA	65548890	65568035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65549017_65549677_65549733_65551283_65551378_65552707_65552789_65554945_65555103_65555173_65555232_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029199.12_8	chr5	+	654	6	FSM	ENSMUSG00000029199.12	ENST00000513731.6	675	6	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCACAGGAGTGTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	65549606	65566147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65549733_65557189_65557319_65559953_65560100_65561510_65561582_65562672_65562785_65566077
ENSMUSG00000029201.15_0	chr5	-	2530	12	FSM	ENSMUSG00000029201.15	ENSMUST00000031103.14	2550	12	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	5113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGGAAAGATTCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	65593282	65570573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65571407_65574167_65574279_65574363_65574456_65574853_65574988_65575820_65575952_65577591_65577687_65579977_65580126_65580503_65580702_65580792_65580994_65581384_65581487_65584758_65584928_65592966
ENSMUSG00000029202.13_0	chr5	-	8908	33	FSM	ENSMUSG00000029202.13	ENSMUST00000201948.4	8934	33	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTTAAAACTGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	65855495	65763073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65767539_65772601_65772948_65776286_65776396_65776962_65777109_65777892_65777956_65780322_65780443_65781262_65781396_65784427_65784543_65784902_65785108_65785341_65785466_65787261_65787399_65789055_65789125_65791514_65791674_65792657_65792782_65795084_65795246_65795899_65796006_65801362_65801479_65803675_65803816_65804430_65804480_65805266_65805349_65807735_65807850_65808487_65808640_65809730_65809877_65811347_65811443_65812131_65812248_65813610_65813752_65815689_65815771_65816949_65817077_65821198_65821297_65821770_65821858_65823450_65823655_65854105_65854281_65855092
ENSMUSG00000029203.17_1	chr5	+	4879	7	FSM	ENSMUSG00000029203.17	ENSMUST00000142407.8	4893	7	14	0	-14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTTTTATATCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	65694589	65756331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65694890_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_10	chr5	+	4677	6	FSM	ENSMUSG00000029203.17	ENSMUST00000202679.4	4682	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGTTGAATTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	65694633	65756267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65694890_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_8	chr5	+	1507	7	FSM	ENSMUSG00000029203.17	ENSMUST00000201292.4	1529	7	16	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATTTGACATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	65694634	65753092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65694802_65723331_65723426_65728874_65728934_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029203.17_9	chr5	+	1425	5	FSM	ENSMUSG00000029203.17	ENSMUST00000201984.4	1449	5	18	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATTTGACATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	65694651	65753092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65694890_65738728_65738812_65749218_65749319_65751762_65751892_65752217
ENSMUSG00000029204.8_0	chr5	+	956	2	FSM	ENSMUSG00000029204.8	ENST00000610353.4	977	2	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCAAGGTCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	66020862	66050305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_66021185_66049671
ENSMUSG00000029204.8_6	chr5	+	625	1	ISM	ENSMUSG00000029204.8	ENSMUST00000031106.8	5093	4	31125	3738	28503	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	1266	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCCAAGGTCCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	66049680	66050305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_66049700_66050300
ENSMUSG00000029207.17_0	chr5	-	6508	16	FSM	ENSMUSG00000029207.17	ENSMUST00000162366.8	6540	16	22	10	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCACCTTAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	66776079	66456077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468424_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUSG00000029207.17_26	chr5	-	6308	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159786.8	6333	16	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGCATAAAATCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	66775993	66456194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUSG00000029207.17_4	chr5	-	6501	17	FSM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	10	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTTTAAAAAAATCACC	NA	NA	NA	NA	NA	NA	NA	NA	66776014	66456085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804_66700961_66775910
ENSMUSG00000029207.17_5	chr5	-	6393	16	ISM	ENSMUSG00000029207.17	ENSMUST00000160870.8	6526	17	75063	20	75045	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAACCTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66700961	66456090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66549615_66549679_66557418_66557625_66608810_66609627_66619440_66619510_66649400_66649516_66700804
ENSMUSG00000029207.17_6	chr5	-	6604	16	FSM	ENSMUSG00000029207.17	ENSMUST00000159512.8	6632	16	17	11	-9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAAAAAAATCACCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	66776110	66456081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66460053_66464877_66465058_66466420_66466537_66468342_66468427_66469501_66469590_66470657_66470773_66520060_66520189_66522316_66522464_66548969_66549031_66549114_66549201_66557418_66557628_66608810_66609627_66619440_66619510_66649400_66649516_66700741_66700961_66775910
ENSMUSG00000029208.17_0	chr5	+	3415	17	FSM	ENSMUSG00000029208.17	ENSMUST00000087228.11	3433	17	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCCAAGAAAAAGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69714308	69730434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69720425_69720566_69721866_69721991_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029208.17_1	chr5	+	1750	15	FSM	ENSMUSG00000029208.17	ENSMUST00000031113.13	1769	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCAGCAGGTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	69714342	69729067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_69714509_69715527_69715640_69715784_69715934_69716189_69716271_69716892_69716971_69717774_69717859_69718477_69718543_69718996_69719201_69722772_69722906_69723703_69723848_69724470_69724605_69725738_69725841_69726571_69726692_69728103_69728141_69728926
ENSMUSG00000029209.16_0	chr5	-	1877	7	FSM	ENSMUSG00000029209.16	ENSMUST00000031117.13	1894	7	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATAAAATAATTATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	69749675	69732352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_69733297_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029209.16_3	chr5	-	1582	7	FSM	ENSMUSG00000029209.16	ENSMUST00000120789.8	1594	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAAGTCTAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69749630	69734090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_69734785_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003_69747167_69749550
ENSMUSG00000029209.16_4	chr5	-	1503	6	ISM	ENSMUSG00000029209.16	ENSMUST00000120789.8	1594	7	2469	6	1004	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAAAGTCTAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69747167	69734090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_69734785_69735320_69735496_69736850_69737036_69742316_69742500_69743807_69743910_69747003
ENSMUSG00000029213.12_0	chr5	-	3877	5	FSM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATATCATAGACTCATG	NA	NA	NA	NA	NA	NA	NA	NA	72325520	72313923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693_72322850_72325421
ENSMUSG00000029213.12_1	chr5	-	3779	4	ISM	ENSMUSG00000029213.12	ENSMUST00000013693.11	3895	5	2682	6	2682	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTATATCATAGACTCATG	NA	NA	NA	NA	NA	NA	NA	NA	72322850	72313923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_72317237_72318250_72318407_72320064_72320218_72322693
ENSMUSG00000029217.17_0	chr5	-	2654	19	FSM	ENSMUSG00000029217.17	ENSMUST00000071944.13	2659	19	0	5	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAATTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	73025787	72913063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386_72982474_73025736
ENSMUSG00000029217.17_1	chr5	-	2605	18	ISM	ENSMUSG00000029217.17	ENSMUST00000071944.13	2659	19	43312	5	43312	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAAATTTTTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	72982475	72913063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_72913723_72914705_72914864_72914946_72915066_72917685_72917751_72920906_72921124_72921466_72921639_72922854_72922930_72926047_72926182_72928489_72928570_72931173_72931229_72936763_72936830_72939345_72939519_72941060_72941102_72943259_72943389_72944080_72944163_72946482_72946588_72980798_72980985_72982386
ENSMUSG00000029221.16_0	chr5	+	5625	17	FSM	ENSMUSG00000029221.16	ENSMUST00000113676.6	5648	17	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTATGCTTTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	67464317	67515780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_67464541_67473020_67473189_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029221.16_2	chr5	+	5696	18	FSM	ENSMUSG00000029221.16	ENSMUST00000162372.8	5711	18	9	6	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTATGCTTTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	67464306	67515780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_67464541_67473020_67473189_67482016_67482077_67484195_67484296_67485040_67485134_67485784_67485868_67487235_67487295_67490396_67490465_67491908_67492012_67497293_67497350_67499436_67499573_67501872_67501913_67502968_67503041_67503468_67503577_67505262_67505429_67507124_67507255_67509994_67510109_67511874
ENSMUSG00000029223.13_0	chr5	+	1162	9	FSM	ENSMUSG00000029223.13	ENSMUST00000031131.11	1177	9	6	9	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATCAGCTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66833439	66844568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_66833666_66833778_66833791_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029223.13_18	chr5	+	917	7	ISM	ENSMUSG00000029223.13	ENST00000284440.9	976	8	670	1	670	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATCAGCTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66834293	66844568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029223.13_5	chr5	+	975	8	FSM	ENSMUSG00000029223.13	ENST00000284440.9	976	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTATCAGCTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	66833623	66844568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_66833675_66834286_66834416_66837005_66837157_66839784_66839871_66839951_66840000_66841031_66841099_66842115_66842175_66844184
ENSMUSG00000029227.16_0	chr5	+	4650	17	FSM	ENSMUSG00000029227.16	ENSMUST00000080164.12	4673	17	14	9	-8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTAAGCAATGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	74696123	74759442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_12	chr5	+	4744	18	FSM	ENSMUSG00000029227.16	ENSMUST00000113536.8	4769	18	17	8	5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGTTTGGTCATTACC	NA	NA	NA	NA	NA	NA	NA	NA	74696148	74759453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_33	chr5	+	1954	16	FSM	ENSMUSG00000029227.16	ENSMUST00000113535.9	1969	16	13	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAAAAGCTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74696154	74756804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_37	chr5	+	2201	18	FSM	ENSMUSG00000029227.16	ENST00000337488.11	2220	18	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAATTAAGTCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	74696153	74756873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697461_74697507_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_55	chr5	+	1845	15	FSM	ENSMUSG00000029227.16	ENST00000306932.10	1865	15	10	10	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAAAAGCTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74696218	74756804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74717700_74717811_74731759_74731854_74733089_74733247_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029227.16_58	chr5	+	2100	18	FSM	ENSMUSG00000029227.16	ENST00000358575.9	2115	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATATCTAAGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	74696217	74756854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74696423_74697602_74697643_74701592_74701651_74702669_74702774_74706072_74706138_74706713_74706822_74707355_74707487_74707767_74707837_74717700_74717811_74725179_74725288_74731759_74731854_74733089_74733247_74745706_74745734_74747663_74747719_74748805_74748862_74752434_74752655_74755734_74755873_74756499
ENSMUSG00000029229.9_0	chr5	-	9655	6	FSM	ENSMUSG00000029229.9	ENSMUST00000075452.7	9699	6	13	31	13	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	75205422	75158679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_75167425_75171891_75171952_75172113_75172171_75187728_75187885_75188021_75188077_75204840
ENSMUSG00000029229.9_2	chr5	-	687	5	FSM	ENSMUSG00000029229.9	ENST00000512964.5	696	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATTCTCAAAAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	75204950	75167118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_75167425_75171891_75171952_75187728_75187885_75188021_75188077_75204840
ENSMUSG00000029231.16_0	chr5	+	6539	23	FSM	ENSMUSG00000029231.16	ENSMUST00000000476.15	6549	23	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGGTCTACCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75312970	75358870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_75313119_75322891_75322953_75324195_75324514_75327171_75327433_75328497_75328629_75331155_75331328_75331422_75331613_75334049_75334166_75335605_75335733_75337327_75337522_75338305_75338401_75338590_75338724_75340828_75340934_75341659_75341771_75342182_75342337_75343636_75343804_75346174_75346291_75346611_75346735_75348523_75348636_75349680_75349781_75349891_75349998_75353091_75353334_75355613
ENSMUSG00000029233.16_0	chr5	+	1725	6	FSM	ENSMUSG00000029233.16	ENSMUST00000031143.13	1747	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGCACGCCCTGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	76288131	76303318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76288396_76295532_76295676_76297049_76297086_76297599_76297798_76301370_76301506_76302369
ENSMUSG00000029233.16_2	chr5	+	718	4	FSM	ENSMUSG00000029233.16	ENST00000264228.9	732	4	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGGGCTTTATGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	76295548	76302627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76295676_76297599_76297798_76301370_76301506_76302369
ENSMUSG00000029234.14_0	chr5	+	1878	6	FSM	ENSMUSG00000029234.14	ENSMUST00000031144.14	1897	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTAGTACTCGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	76331735	76357082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76332200_76347191_76347418_76351953_76352130_76352483_76352664_76355648_76355755_76356356
ENSMUSG00000029236.5_0	chr5	-	261	5	ISM	ENSMUSG00000029236.5	ENST00000511469.5	312	6	5190	6	5190	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGTGTATGTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	76506251	76488611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_76488678_76491768_76491820_76491910_76491941_76493285_76493346_76506197
ENSMUSG00000029236.5_1	chr5	-	305	6	FSM	ENSMUSG00000029236.5	ENST00000511469.5	312	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTGAGTGTATGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	76511441	76488612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_76488678_76491768_76491820_76491910_76491941_76493285_76493346_76506197_76506257_76511401
ENSMUSG00000029236.5_2	chr5	-	209	4	ISM	ENSMUSG00000029236.5	ENST00000511469.5	312	6	18094	6	18094	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGTGTATGTCATAC	NA	NA	NA	NA	NA	NA	NA	NA	76493347	76488611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_76488678_76491768_76491820_76491910_76491941_76493285
ENSMUSG00000029238.12_0	chr5	-	9737	23	FSM	ENSMUSG00000029238.12	ENSMUST00000202651.4	9744	23	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACATTTTCCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76452633	76357715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452501
ENSMUSG00000029238.12_2	chr5	-	7458	23	FSM	ENSMUSG00000029238.12	ENSMUST00000075159.5	7478	23	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACTGTTTTGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	76452384	76360032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_76364726_76374779_76375075_76377204_76377411_76378011_76378207_76379242_76379396_76383612_76383703_76384128_76384230_76384867_76385010_76388717_76388794_76389716_76389865_76390628_76390736_76390925_76391009_76393042_76393162_76393268_76393383_76396188_76396310_76402220_76402311_76410521_76410614_76413637_76413787_76414203_76414264_76414646_76414737_76421805_76421891_76451270_76451350_76452214
ENSMUSG00000029246.15_0	chr5	-	3963	11	FSM	ENSMUSG00000029246.15	ENSMUST00000140076.2	3981	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATGTGTTTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	77099415	77061130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77063253_77063791_77063913_77065880_77066103_77067217_77067346_77067602_77067755_77069316_77069390_77070057_77070204_77070301_77070415_77073520_77073728_77074637_77074705_77098803
ENSMUSG00000029247.18_0	chr5	+	2465	9	FSM	ENSMUSG00000029247.18	ENSMUST00000031160.16	2482	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAATATATTCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	77099163	77115345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029247.18_5	chr5	+	2324	10	FSM	ENSMUSG00000029247.18	ENSMUST00000120912.8	2345	10	10	11	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAATATATTCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	77099204	77115345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77099516_77099615_77099683_77104392_77104591_77107161_77107341_77108956_77109137_77109239_77109354_77110273_77110358_77112288_77112470_77114093_77114253_77114494
ENSMUSG00000029249.16_0	chr5	+	6986	4	FSM	ENSMUSG00000029249.16	ENSMUST00000080359.12	7004	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATCGGACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	77413347	77434271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77413636_77415778_77416671_77423080_77423165_77428549
ENSMUSG00000029249.16_5	chr5	+	6904	4	FSM	ENSMUSG00000029249.16	ENSMUST00000113449.2	6924	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTATCGGACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	77414054	77434271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77414261_77415778_77416671_77423080_77423165_77428549
ENSMUSG00000029250.6_0	chr5	+	4124	25	FSM	ENSMUSG00000029250.6	ENSMUST00000031167.6	4145	25	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTCTTGATGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77458006	77497163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77458478_77460997_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_21	chr5	+	3504	24	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	2655	4	2655	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCAGAAGTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	77460997	77497014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_77461071_77463696_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_32	chr5	+	3432	23	ISM	ENSMUSG00000029250.6	ENST00000441246.6	3519	25	5353	4	5353	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCAGAAGTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	77463695	77497014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_77463848_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029250.6_8	chr5	+	3626	24	FSM	ENSMUSG00000029250.6	ENST00000431623.6	3645	24	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAGTCTTGATGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77458353	77497163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77458478_77460997_77461071_77467810_77467924_77468057_77468278_77468801_77468961_77471400_77471566_77473585_77473783_77473894_77474015_77474381_77474569_77478979_77479124_77479796_77479937_77480033_77480146_77482263_77482419_77483480_77483680_77484273_77484443_77487167_77487265_77488221_77488317_77490376_77490628_77490707_77490798_77491016_77491125_77492638_77492753_77493097_77493259_77496069_77496266_77496926
ENSMUSG00000029253.13_0	chr5	-	3159	19	FSM	ENSMUSG00000029253.13	ENSMUST00000031170.10	3192	19	14	19	14	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAAACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86213428	86159901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86160187_86161278_86161370_86164060_86164216_86166247_86166344_86168687_86168811_86170237_86170343_86176992_86177050_86180247_86180331_86181423_86181571_86182089_86182370_86183274_86183449_86185170_86185773_86193150_86193361_86194237_86194440_86195442_86195543_86200029_86200101_86206013_86206106_86209862_86209907_86213186
ENSMUSG00000029260.16_0	chr5	-	1184	4	FSM	ENSMUSG00000029260.16	ENST00000511240.1	1201	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTGACTAAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87054713	87039101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_87039341_87049012_87049145_87052115_87052265_87054049
ENSMUSG00000029260.16_1	chr5	-	1272	5	FSM	ENSMUSG00000029260.16	ENST00000508661.5	1289	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTTGACTAAAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	87054713	87039101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_87039341_87041591_87041680_87049012_87049145_87052115_87052265_87054049
ENSMUSG00000029263.16_0	chr5	+	4560	13	FSM	ENSMUSG00000029263.16	ENSMUST00000119014.8	4573	13	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACATTAACTTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108460481	108497215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108460945_108461824_108462031_108465128_108465339_108466690_108466880_108467761_108467904_108474682_108474896_108479840_108480059_108480549_108480832_108483969_108484428_108486420_108486613_108489660_108489971_108492089_108492254_108495702
ENSMUSG00000029265.5_0	chr5	+	3023	3	FSM	ENSMUSG00000029265.5	ENSMUST00000031190.5	3085	3	57	5	57	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGTTTTTATATTTA	NA	NA	NA	NA	NA	NA	NA	NA	108416819	108428387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108417676_108423434_108423599_108426384
ENSMUSG00000029265.5_1	chr5	+	1396	4	FSM	ENSMUSG00000029265.5	ENST00000370267.1	1404	4	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAATATACTTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	108416963	108427020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108417049_108417164_108417676_108423434_108423599_108426384
ENSMUSG00000029267.18_0	chr5	+	4049	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAGAGCTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	108213607	108256860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_108213832_108228690_108228889_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_1	chr5	+	4045	15	FSM	ENSMUSG00000029267.18	ENSMUST00000081567.11	4060	15	5	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAGAGCTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	108213612	108256860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108213832_108228690_108228890_108229002_108229085_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029267.18_2	chr5	+	4038	15	NNC	ENSMUSG00000029267.18	novel	4060	15	NA	NA	14	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTAAAAGAGCTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	108213623	108256860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_108213832_108228690_108228890_108229002_108229089_108234864_108234961_108235161_108235263_108235806_108235956_108239926_108240023_108241203_108241273_108241990_108242115_108246984_108247053_108248678_108248850_108251885_108251992_108252131_108252185_108252291_108252397_108254453
ENSMUSG00000029270.11_0	chr5	-	2696	5	FSM	ENSMUSG00000029270.11	ENSMUST00000031198.11	2721	5	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAGAAAAAGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	108134938	108055930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108058083_108059477_108059655_108062211_108062320_108072450_108072586_108134814
ENSMUSG00000029270.11_3	chr5	-	1641	4	FSM	ENSMUSG00000029270.11	ENST00000616709.4	1656	4	10	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTACTTACACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	108134950	108056820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108058083_108062211_108062320_108072450_108072586_108134814
ENSMUSG00000029273.11_0	chr5	-	848	7	FSM	ENSMUSG00000029273.11	ENST00000458020.1	865	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATCTAGGGAGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	87714017	87703805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_87703909_87704712_87704894_87706346_87706442_87707619_87707747_87711733_87711827_87712568_87712695_87713894
ENSMUSG00000029276.14_0	chr5	-	1999	19	FSM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAGAAAAATTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	107745497	107696840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745409
ENSMUSG00000029276.14_10	chr5	-	1934	19	FSM	ENSMUSG00000029276.14	ENSMUST00000082121.9	1945	19	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAATGCTGTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	107745754	107696899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653_107744729_107745672
ENSMUSG00000029276.14_2	chr5	-	1912	18	ISM	ENSMUSG00000029276.14	ENSMUST00000078021.13	2015	19	776	8	714	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACTAGAAAAATTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	107744729	107696840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_107697042_107697256_107697340_107698837_107698962_107705147_107705212_107705783_107705891_107706327_107706413_107708741_107708816_107708918_107708961_107709707_107709798_107710110_107710142_107710616_107710671_107717995_107718184_107720145_107720249_107721550_107721789_107723097_107723207_107726316_107726434_107741618_107741745_107744653
ENSMUSG00000029279.16_0	chr5	+	4734	19	FSM	ENSMUSG00000029279.16	ENSMUST00000031215.15	4745	19	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGATATATTCTGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	107479030	107534919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107479174_107489165_107489308_107489885_107490126_107491418_107491557_107493001_107493117_107496331_107496505_107497941_107498293_107504617_107504747_107505612_107505802_107506702_107506876_107507058_107507340_107507445_107507572_107507637_107507854_107517168_107517231_107518020_107518196_107524130_107524229_107524875_107525082_107525769_107525951_107533323
ENSMUSG00000029283.18_0	chr5	+	2864	11	FSM	ENSMUSG00000029283.18	ENSMUST00000117196.9	2864	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATCAGAATACTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	107112187	107132297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUSG00000029283.18_1	chr5	+	2948	12	FSM	ENSMUSG00000029283.18	ENSMUST00000031221.12	2961	12	4	9	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTTATATCAGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	107112191	107132289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107112292_107112798_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUSG00000029283.18_6	chr5	+	2848	11	ISM	ENSMUSG00000029283.18	ENSMUST00000118261.8	3129	12	372	8	372	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTTATATCAGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	107112798	107132289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_107112981_107116723_107116808_107117024_107117161_107120612_107120707_107120790_107120934_107121642_107121887_107122466_107122563_107123350_107123527_107124495_107124579_107127160_107127311_107130829
ENSMUSG00000029287.15_0	chr5	-	6050	17	FSM	ENSMUSG00000029287.15	ENSMUST00000031224.15	6087	17	28	9	28	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTAATTTATGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	107437467	107254444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107257624_107266284_107266393_107269225_107269274_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758_107362944_107414059_107414217_107437120
ENSMUSG00000029287.15_6	chr5	-	2925	14	FSM	ENSMUSG00000029287.15	ENST00000370399.6	2946	14	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCTCCCTCCATAGC	NA	NA	NA	NA	NA	NA	NA	NA	107362933	107257047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107257624_107266284_107266433_107278326_107278445_107280598_107280896_107284784_107284944_107285395_107285537_107287634_107287788_107288249_107288579_107290222_107290413_107295891_107296040_107297655_107297825_107302117_107302302_107325670_107325809_107362758
ENSMUSG00000029288.12_0	chr5	+	1480	11	FSM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATAGTGTAGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	88603893	88615983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88603966_88604743_88604813_88607217_88607284_88608561_88608610_88609491_88609603_88611130_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029288.12_8	chr5	+	1408	10	ISM	ENSMUSG00000029288.12	ENST00000449493.2	1487	11	852	5	852	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATAGTGTAGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	88604743	88615983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_88604813_88607217_88607284_88608561_88608610_88609491_88609603_88611130_88611326_88612272_88612369_88612989_88613050_88613148_88613194_88613564_88613610_88615310
ENSMUSG00000029290.13_0	chr5	+	2643	12	FSM	ENSMUSG00000029290.13	ENSMUST00000031227.11	2667	12	13	11	13	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAAATAATTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	106024446	106063673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_106024565_106026614_106026660_106034052_106034089_106034182_106034295_106036299_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029290.13_5	chr5	+	2310	10	FSM	ENSMUSG00000029290.13	ENST00000370447.3	2311	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCAAAGATTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106034051	106063769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_106034089_106034182_106034295_106036566_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029290.13_9	chr5	+	2263	9	ISM	ENSMUSG00000029290.13	ENST00000370447.3	2311	10	141	1	141	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTTCAAAGATTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106034192	106063769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_106034295_106036566_106036706_106038983_106039183_106044357_106044470_106053780_106053929_106054904_106055005_106058036_106058168_106059278_106059375_106062533
ENSMUSG00000029291.12_1	chr5	+	3517	18	FSM	ENSMUSG00000029291.12	ENSMUST00000198965.5	3536	18	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTACTAACCTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88712906	88799240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88713336_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793461_88795077_88795106_88796114_88796184_88797690
ENSMUSG00000029291.12_11	chr5	+	1680	16	ISM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	16514	4	16514	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGACACCAGGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88762805	88797839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793488_88796114_88796184_88797690
ENSMUSG00000029291.12_4	chr5	+	1743	17	FSM	ENSMUSG00000029291.12	ENST00000502653.5	1747	17	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCGACACCAGGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	88746291	88797839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88746349_88762799_88762974_88764320_88764439_88765193_88765296_88769159_88769284_88775079_88775142_88775883_88775950_88778395_88778466_88780297_88780391_88783050_88783135_88785050_88785219_88786839_88786938_88790787_88790908_88791926_88792024_88793395_88793488_88796114_88796184_88797690
ENSMUSG00000029298.16_0	chr5	-	4367	11	FSM	ENSMUSG00000029298.16	ENSMUST00000031238.13	4381	11	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAAACTTGAGGCTGATA	NA	NA	NA	NA	NA	NA	NA	NA	105258140	105225507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_105228131_105228995_105229190_105229516_105229620_105230569_105230777_105231438_105231720_105232785_105233032_105241936_105242134_105242315_105242426_105251634_105251763_105253529_105253738_105258070
ENSMUSG00000029298.16_1	chr5	-	4298	10	ISM	ENSMUSG00000029298.16	ENSMUST00000031238.13	4381	11	4406	10	4406	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTGAGGCTGATATG	NA	NA	NA	NA	NA	NA	NA	NA	105253736	105225505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_105228131_105228995_105229190_105229516_105229620_105230569_105230777_105231438_105231720_105232785_105233032_105241936_105242134_105242315_105242426_105251634_105251763_105253529
ENSMUSG00000029304.15_2	chr5	+	1394	7	FSM	ENSMUSG00000029304.15	ENSMUST00000031243.15	1410	7	5	11	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	54908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	104582988	104588905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104583063_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_35	chr5	+	1439	7	FSM	ENSMUSG00000029304.15	ENSMUST00000112748.8	1456	7	9	8	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	104582995	104588905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104583115_104584240_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029304.15_48	chr5	+	1320	6	FSM	ENSMUSG00000029304.15	ENSMUST00000112747.2	1507	6	183	4	183	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATGTAAGGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	104584240	104588905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104584309_104584406_104584443_104585520_104585602_104586091_104586134_104587130_104587413_104588094
ENSMUSG00000029307.8_0	chr5	+	2732	6	FSM	ENSMUSG00000029307.8	ENSMUST00000066708.7	2764	6	22	10	22	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTCCCAGAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	104350500	104361958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104350579_104354941_104355017_104355455_104355504_104357763_104357797_104357967_104358013_104359505
ENSMUSG00000029307.8_1	chr5	+	2646	5	ISM	ENSMUSG00000029307.8	ENSMUST00000066708.7	2764	6	4462	19	4462	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGATAATAATTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	104354940	104361949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_104355017_104355455_104355504_104357763_104357797_104357967_104358013_104359505
ENSMUSG00000029310.14_0	chr5	+	1477	8	FSM	ENSMUSG00000029310.14	ENSMUST00000031250.14	1488	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTTTCAAGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	104194744	104213244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104195013_104198443_104198684_104202137_104202234_104203355_104203443_104205972_104206085_104207501_104207649_104209539_104209625_104212802
ENSMUSG00000029311.17_0	chr5	-	1805	7	FSM	ENSMUSG00000029311.17	ENSMUST00000031251.16	1825	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTATCTGTCTCTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	104169774	104137636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_104138461_104140683_104140801_104151037_104151176_104156444_104156552_104157660_104157793_104166039_104166148_104169395
ENSMUSG00000029312.13_0	chr5	-	3189	10	FSM	ENSMUSG00000029312.13	ENSMUST00000031254.9	3193	10	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTAATGTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	104059121	104009915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_104011058_104012067_104012270_104015358_104015519_104015710_104015880_104018394_104018507_104019896_104020041_104022068_104022256_104023606_104024156_104033772_104034157_104058981
ENSMUSG00000029313.19_0	chr5	+	8291	20	FSM	ENSMUSG00000029313.19	ENSMUST00000054979.10	8323	20	21	11	21	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATTGGAGTTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	103902048	104003177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_103902212_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ENSMUSG00000029313.19_2	chr5	+	8306	20	FSM	ENSMUSG00000029313.19	ENSMUST00000031256.6	8312	20	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGAGTTGAGCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	103902438	104003182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_103902612_103930989_103931111_103931521_103932380_103958928_103958974_103962847_103962935_103964078_103964116_103966800_103966853_103973845_103973901_103974008_103974047_103976213_103976377_103981335_103982326_103988921_103989020_103990092_103990334_103990853_103990955_103991073_103991135_103994099_103994234_103994901_103994974_103995579_103995718_103997215_103997443_103998567
ENSMUSG00000029314.15_0	chr5	+	3033	14	FSM	ENSMUSG00000029314.15	ENSMUST00000112887.8	3059	14	23	3	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGTTGCATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	100994018	101046962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100994228_100994337_100994424_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUSG00000029314.15_2	chr5	+	2861	13	FSM	ENSMUSG00000029314.15	ENSMUST00000031255.15	2884	13	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAATGAGTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100994098	101046956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100994228_100994520_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUSG00000029314.15_4	chr5	+	3025	12	FSM	ENSMUSG00000029314.15	ENSMUST00000092990.4	3035	12	4	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTGTTGCATTATTC	NA	NA	NA	NA	NA	NA	NA	NA	100994233	101046962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100994815_101005007_101005075_101031055_101031327_101032183_101032259_101032825_101032916_101033791_101033886_101037968_101038085_101039508_101039565_101040166_101040253_101040937_101041067_101041298_101041379_101045582
ENSMUSG00000029319.9_0	chr5	-	1727	7	FSM	ENSMUSG00000029319.9	ENSMUST00000031262.9	1743	7	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCATAGACGCGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	100822143	100802597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100803338_100805683_100805873_100808037_100808172_100809702_100809789_100811445_100811568_100815757_100815925_100821854
ENSMUSG00000029322.13_0	chr5	-	729	5	FSM	ENSMUSG00000029322.13	ENSMUST00000031264.12	744	5	7	8	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGACTGTTTTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100720104	100701598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100701855_100704345_100704462_100707617_100707743_100710490_100710629_100720010
ENSMUSG00000029326.14_0	chr5	+	1824	6	FSM	ENSMUSG00000029326.14	ENSMUST00000169390.8	1833	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTTTCATACAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	100187852	100216619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100188162_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_19	chr5	+	1262	4	ISM	ENSMUSG00000029326.14	ENST00000505846.5	1353	5	18951	6	18951	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGCATTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	100206996	100216558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_100207101_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_21	chr5	+	1456	5	ISM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	18951	6	18951	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGCATTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	100206996	100216558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_6	chr5	+	1340	5	FSM	ENSMUSG00000029326.14	ENST00000505846.5	1353	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGCATTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	100188052	100216558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100188133_100206998_100207101_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029326.14_7	chr5	+	1534	6	FSM	ENSMUSG00000029326.14	ENST00000509635.5	1547	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATGCATTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	100188052	100216558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100188133_100206998_100207101_100208832_100209027_100210001_100210135_100211617_100211742_100215657
ENSMUSG00000029328.16_0	chr5	-	2730	8	FSM	ENSMUSG00000029328.16	ENSMUST00000128187.8	2752	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAATCTCAGTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	100187068	100181444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100182844_100183962_100184055_100184339_100184511_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029328.16_6	chr5	-	1813	7	FSM	ENSMUSG00000029328.16	ENST00000614627.4	1838	7	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTGGTTGTAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	100187354	100182476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100182844_100183962_100184055_100184720_100184836_100184943_100185076_100185426_100185589_100185671_100185841_100186578
ENSMUSG00000029334.15_0	chr5	-	1371	4	FSM	ENSMUSG00000029334.15	ENSMUST00000162147.6	1389	4	11	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99091682	99079133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272
ENSMUSG00000029334.15_1	chr5	-	1292	5	FSM	ENSMUSG00000029334.15	ENSMUST00000162619.8	1308	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCTATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99091682	99079133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_99079965_99082187_99082255_99090012_99090076_99091272_99091344_99091422
ENSMUSG00000029338.14_0	chr5	-	5643	17	FSM	ENSMUSG00000029338.14	ENSMUST00000031281.14	5656	17	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCCATAATGTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	98178815	98030648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_98034460_98085945_98086027_98086261_98086427_98096103_98096200_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175329_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_32	chr5	-	1418	16	FSM	ENSMUSG00000029338.14	ENST00000307333.7	1435	16	13	4	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATTTCTTGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98178398	98085943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_37	chr5	-	1153	12	FSM	ENSMUSG00000029338.14	ENST00000346652.10	1165	12	8	4	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGATTTCTTGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98178442	98085943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442_98177515_98178256
ENSMUSG00000029338.14_9	chr5	-	3343	17	FSM	ENSMUSG00000029338.14	ENST00000680913.1	3363	17	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCACACCTCCACATAT	NA	NA	NA	NA	NA	NA	NA	NA	98178437	98032592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_98034460_98085924_98086027_98086261_98086427_98096103_98096197_98097028_98097071_98108468_98108565_98113540_98113620_98123179_98123250_98125459_98125559_98127832_98127894_98151085_98151167_98151914_98151984_98152123_98152232_98152717_98152800_98175325_98175402_98177442_98177515_98178256
ENSMUSG00000029344.16_0	chr5	+	1808	7	FSM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACACGAGTGAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	112424572	112463216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112424638_112451765_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_12	chr5	+	1742	6	ISM	ENSMUSG00000029344.16	ENSMUST00000239473.2	1813	7	27194	5	-3906	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACACGAGTGAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	112451766	112463216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_112451838_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029344.16_15	chr5	+	900	3	FSM	ENSMUSG00000029344.16	ENST00000564073.1	917	3	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGAAAGTCAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	112455685	112459598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112456344_112457554_112457758_112459559
ENSMUSG00000029344.16_5	chr5	+	1736	6	FSM	ENSMUSG00000029344.16	ENSMUST00000071455.7	1741	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCACACGAGTGAGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	112424572	112463216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112424638_112455431_112456344_112457554_112457754_112459549_112459601_112461107_112461157_112462756
ENSMUSG00000029345.14_0	chr5	+	3541	14	FSM	ENSMUSG00000029345.14	ENSMUST00000031288.14	3560	14	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATACATACACAATTAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	112474229	112485926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112474340_112475350_112475537_112475827_112476049_112477231_112477386_112477612_112477770_112478956_112479085_112479733_112479887_112480829_112481358_112481440_112481548_112482182_112482352_112482725_112482970_112483438_112483582_112483880_112484047_112484851
ENSMUSG00000029346.13_0	chr5	-	1067	7	FSM	ENSMUSG00000029346.13	ENSMUST00000031289.7	1110	7	36	7	36	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCAGCTTGGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	112490870	112485264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112485608_112485841_112485914_112486183_112486339_112487584_112487684_112487762_112487990_112488961_112489003_112490740
ENSMUSG00000029352.15_0	chr5	-	486	4	FSM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGGACTCCCGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	113228419	113223777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113223938_113226248_113226382_113227625_113227745_113228345
ENSMUSG00000029352.15_1	chr5	-	412	3	ISM	ENSMUSG00000029352.15	ENST00000404334.1	496	4	679	6	679	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAGGACTCCCGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	113227744	113223777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_113223938_113226248_113226382_113227625
ENSMUSG00000029359.14_0	chr5	+	1026	8	FSM	ENSMUSG00000029359.14	ENSMUST00000031304.14	1031	8	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCATCTGTCCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	118165811	118199942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118166053_118184379_118184450_118191648_118191730_118192894_118193035_118194441_118194504_118194601_118194710_118197506_118197555_118199666
ENSMUSG00000029359.14_1	chr5	+	600	6	FSM	ENSMUSG00000029359.14	ENST00000541210.5	618	6	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGTGCCAGAGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	118165877	118197551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118166053_118184379_118184450_118192894_118193035_118194441_118194504_118194601_118194710_118197506
ENSMUSG00000029361.19_0	chr5	+	5277	30	FSM	ENSMUSG00000029361.19	ENST00000618760.4	5295	30	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACCACTTCCTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	117979819	118092134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117980081_118004913_118005992_118017348_118017476_118031890_118032020_118033845_118033992_118034737_118034901_118035775_118035868_118038535_118038678_118041885_118042026_118043375_118043551_118046054_118046157_118048122_118048318_118048831_118048918_118050787_118050933_118051861_118051967_118052448_118052508_118053611_118053714_118057460_118057578_118061308_118061484_118063678_118063818_118064517_118064597_118074483_118074678_118076201_118076372_118081189_118081401_118081883_118081972_118083880_118084003_118085484_118085634_118087698_118087894_118090829_118090949_118091862
ENSMUSG00000029363.15_0	chr5	-	2774	11	FSM	ENSMUSG00000029363.15	ENSMUST00000086461.13	2796	11	13	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCCATCTGACCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	117527099	117516176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_117517972_117518831_117518887_117519900_117519979_117520400_117520531_117520843_117520926_117521459_117521620_117522595_117522670_117523452_117523533_117524786_117524924_117525933_117525999_117526981
ENSMUSG00000029363.15_4	chr5	-	755	3	FSM	ENSMUSG00000029363.15	ENSMUST00000111953.2	772	3	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTATGAATTGTAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	117527097	117524349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_117524924_117525933_117525999_117526981
ENSMUSG00000029364.16_0	chr5	+	2384	9	FSM	ENSMUSG00000029364.16	ENSMUST00000031309.16	2421	9	10	27	10	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAGAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	117495378	117516639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117495539_117501655_117501825_117508755_117509001_117509153_117509286_117512177_117512279_117513833_117514007_117514561_117514673_117514755_117514864_117515454
ENSMUSG00000029366.11_0	chr5	+	3065	7	FSM	ENSMUSG00000029366.11	ENSMUST00000031311.10	3078	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTCTGAGACTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	88912861	88931134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88913206_88917462_88917579_88920488_88920683_88921940_88922089_88924715_88924832_88926220_88926312_88929078
ENSMUSG00000029368.11_1	chr5	+	1386	10	FSM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAAACAAACGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	90608775	90620529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_90608873_90610558_90610692_90612711_90612845_90613732_90613831_90615202_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ENSMUSG00000029368.11_2	chr5	+	1289	9	ISM	ENSMUSG00000029368.11	ENST00000503124.5	1406	10	1789	14	1789	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAAACAAACGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	90610558	90620529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_90610692_90612711_90612845_90613732_90613831_90615202_90615333_90616339_90616555_90617360_90617494_90618599_90618698_90619863_90620003_90620319
ENSMUSG00000029370.11_0	chr5	-	761	7	FSM	ENSMUSG00000029370.11	ENST00000395777.6	773	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAATTATGGCAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90765641	90751917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763653_90763797_90765565
ENSMUSG00000029370.11_1	chr5	-	681	6	ISM	ENSMUSG00000029370.11	ENST00000395777.6	773	7	1850	11	1850	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAGAGAATTATGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	90763796	90751921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757669_90763653
ENSMUSG00000029370.11_3	chr5	-	761	7	NIC	ENSMUSG00000029370.11	novel	1958	11	NA	NA	8	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAATTATGGCAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	90765638	90751917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_-_90752000_90752104_90752224_90754273_90754326_90756657_90756852_90757573_90757672_90763653_90763797_90765565
ENSMUSG00000029371.8_0	chr5	+	1556	4	FSM	ENSMUSG00000029371.8	ENSMUST00000031318.6	1575	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATTCATGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	90907248	90909476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_90907420_90907547_90907684_90907825_90907910_90908311
ENSMUSG00000029375.7_0	chr5	+	2114	4	FSM	ENSMUSG00000029375.7	ENSMUST00000031322.7	2127	4	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGATACAGTGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	90942397	90950918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_90942488_90943057_90943188_90945801_90945886_90949108
ENSMUSG00000029375.7_1	chr5	+	2022	3	ISM	ENSMUSG00000029375.7	ENSMUST00000031322.7	2127	4	664	11	664	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAGTGATACAGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	90943056	90950915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_90943188_90945801_90945886_90949108
ENSMUSG00000029376.9_1	chr5	+	2144	8	FSM	ENSMUSG00000029376.9	ENSMUST00000071652.6	2159	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAATTATAGCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	91079145	91169219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91079293_91094648_91094834_91096681_91096805_91107563_91107717_91109148_91109257_91122181_91122275_91148352_91148479_91168010
ENSMUSG00000029376.9_13	chr5	+	651	5	ISM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	13889	0	13889	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAAGTCCGCATTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	91094657	91122272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_91094834_91096681_91096805_91107563_91107717_91109148_91109257_91122181
ENSMUSG00000029376.9_6	chr5	+	696	6	FSM	ENSMUSG00000029376.9	ENST00000433372.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAAGTCCGCATTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	91080768	91122272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91080805_91094648_91094834_91096681_91096805_91107563_91107717_91109148_91109257_91122181
ENSMUSG00000029377.6_0	chr5	+	4093	5	FSM	ENSMUSG00000029377.6	ENSMUST00000031324.6	4128	5	14	21	14	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAGAACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	91222494	91241484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91222665_91234634_91234722_91236307_91236432_91236939_91237090_91237922
ENSMUSG00000029378.6_0	chr5	+	1201	6	FSM	ENSMUSG00000029378.6	ENSMUST00000031325.6	1215	6	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACAGATTGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	91287462	91296282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91287734_91288756_91288985_91291347_91291550_91292192_91292355_91294496_91294606_91296053
ENSMUSG00000029380.12_0	chr5	+	936	4	FSM	ENSMUSG00000029380.12	ENSMUST00000031327.9	953	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATAACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	91039111	91040969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91039240_91039328_91039453_91039567_91039649_91040366
ENSMUSG00000029381.17_0	chr5	+	6383	10	FSM	ENSMUSG00000029381.17	ENSMUST00000113054.9	6401	10	4	14	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATAGTCAAATTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	92957240	93113163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92957421_93067503_93067636_93081612_93081745_93087835_93090999_93096262_93096337_93098342_93099180_93100397_93100890_93103119_93103271_93109949_93110223_93112214
ENSMUSG00000029385.15_0	chr5	+	2787	8	FSM	ENSMUSG00000029385.15	ENSMUST00000031331.13	2810	8	16	7	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93415131	93424083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93415657_93416480_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUSG00000029385.15_1	chr5	+	2561	7	FSM	ENSMUSG00000029385.15	ENSMUST00000121127.2	2570	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTCCTATTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93416181	93424083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93416619_93417123_93417262_93418652_93418904_93419059_93419139_93419221_93419321_93421196_93421403_93422732
ENSMUSG00000029387.11_0	chr5	+	2664	13	FSM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGAGCCTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124717203	124735736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124717265_124720510_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUSG00000029387.11_3	chr5	+	2598	12	ISM	ENSMUSG00000029387.11	ENSMUST00000031333.4	2672	13	3313	7	3313	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGAGCCTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124720515	124735736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_124720591_124721996_124722104_124722198_124722366_124726687_124726751_124727433_124727464_124728412_124728442_124728931_124729007_124730543_124730598_124732825_124732895_124733615_124733752_124733865_124733903_124733980
ENSMUSG00000029388.15_6	chr5	-	1997	9	FSM	ENSMUSG00000029388.15	ENSMUST00000031334.15	2013	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAGGTTCAGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	124717185	124708282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712660_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ENSMUSG00000029388.15_7	chr5	-	2007	9	NNC	ENSMUSG00000029388.15	novel	2013	9	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGAGGTTCAGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	124717191	124708282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_-_124709418_124709823_124709950_124711140_124711217_124711748_124711818_124712656_124712774_124714860_124714978_124715078_124715216_124716499_124716602_124717063
ENSMUSG00000029389.18_0	chr5	+	2782	14	FSM	ENSMUSG00000029389.18	ENSMUST00000071057.14	2799	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATATATTATCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124690936	124707716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124691103_124692605_124692657_124692733_124692821_124694819_124694912_124695024_124695088_124696084_124696235_124697190_124697381_124698780_124698864_124699968_124700101_124700652_124700746_124704443_124704559_124704896_124705066_124705897_124706191_124706618
ENSMUSG00000029390.14_0	chr5	+	2054	4	FSM	ENSMUSG00000029390.14	ENSMUST00000060226.11	2074	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTATTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124678767	124688559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124679105_124681034_124681228_124684958_124685067_124687143
ENSMUSG00000029392.13_0	chr5	-	2220	7	FSM	ENSMUSG00000029392.13	ENSMUST00000062153.12	2249	7	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACATCAACTTGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	124669434	124631151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124631908_124639902_124639996_124641617_124641797_124652581_124652807_124653580_124653700_124659313_124659465_124668737
ENSMUSG00000029394.12_0	chr5	-	1300	4	FSM	ENSMUSG00000029394.12	ENSMUST00000031341.11	1315	4	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGAATCTTTGAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	124492727	124483487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124484218_124486663_124486791_124488140_124488236_124492379
ENSMUSG00000029397.16_0	chr5	-	1957	9	FSM	ENSMUSG00000029397.16	ENSMUST00000031345.15	1967	9	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCTTTTATGGATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	92110918	92096763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92105736_92105857_92110488
ENSMUSG00000029397.16_2	chr5	-	1399	8	FSM	ENSMUSG00000029397.16	ENSMUST00000169948.2	1417	8	14	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATACTGTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	92110580	92096863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92097724_92099679_92099801_92100799_92100827_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92110488
ENSMUSG00000029397.16_4	chr5	-	635	7	FSM	ENSMUSG00000029397.16	ENST00000507014.1	650	7	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGAGAAGCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	92110582	92097602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92097724_92099679_92099801_92100911_92100971_92101072_92101118_92103393_92103473_92105393_92105510_92110488
ENSMUSG00000029401.9_0	chr5	-	1376	4	FSM	ENSMUSG00000029401.9	ENSMUST00000031347.8	1391	4	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACAACGCATGTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	124616416	124601329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124601875_124606649_124606755_124607760_124607913_124615842
ENSMUSG00000029402.9_0	chr5	+	1096	2	FSM	ENSMUSG00000029402.9	ENSMUST00000031349.9	1115	2	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTTTTGAGGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	124621212	124629184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124621310_124628185
ENSMUSG00000029403.15_0	chr5	-	4042	14	FSM	ENSMUSG00000029403.15	ENSMUST00000086978.12	4066	14	16	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTTTTTTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	92190885	92153940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92155994_92156823_92156913_92164980_92165088_92165240_92165365_92167237_92167332_92167876_92168173_92169961_92170092_92172794_92172884_92178841_92178988_92180982_92181096_92181437_92181617_92185026_92185222_92187096_92187296_92190657
ENSMUSG00000029404.16_0	chr5	+	1177	5	FSM	ENSMUSG00000029404.16	ENSMUST00000031351.11	1192	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTCCTGTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	124254171	124256254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124254675_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_14	chr5	+	645	5	FSM	ENSMUSG00000029404.16	ENST00000426960.6	661	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTCAGCCATCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	124254519	124256103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124254642_124254977_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029404.16_6	chr5	+	717	5	FSM	ENSMUSG00000029404.16	ENST00000315580.10	733	5	11	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTCAGCCATCCCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	124254505	124256103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124254675_124254952_124255257_124255333_124255452_124255892_124255963_124256047
ENSMUSG00000029405.17_0	chr5	-	4222	11	FSM	ENSMUSG00000029405.17	ENSMUST00000167918.8	4232	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTAATCTGAAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92231406	92200004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231193
ENSMUSG00000029405.17_2	chr5	-	4038	12	FSM	ENSMUSG00000029405.17	ENST00000395719.7	4060	12	14	8	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	92221131	92200022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92200525_92200570_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018
ENSMUSG00000029405.17_28	chr5	-	4067	13	FSM	ENSMUSG00000029405.17	ENST00000677201.1	4073	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAAACAATAAACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	92231438	92200050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92200525_92200570_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_36	chr5	-	4054	12	FSM	ENSMUSG00000029405.17	ENST00000677952.1	4074	12	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGTTTGGACTAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	92285578	92200061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92200525_92200570_92202913_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92285410
ENSMUSG00000029405.17_52	chr5	-	1854	12	FSM	ENSMUSG00000029405.17	ENSMUST00000202258.4	1884	12	7	23	7	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAACTTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92231510	92202381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029405.17_56	chr5	-	1811	12	FSM	ENSMUSG00000029405.17	ENST00000677970.1	1823	12	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTAAGGACTGAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	92285537	92202429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92211195_92211295_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92285181_92285302_92285410
ENSMUSG00000029405.17_9	chr5	-	4174	11	FSM	ENSMUSG00000029405.17	ENSMUST00000113127.7	4182	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTTATCTATGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	92231570	92200022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92202913_92203242_92203362_92204127_92204257_92205826_92205930_92212183_92212365_92213610_92213714_92214350_92214442_92216183_92216358_92218215_92218298_92221018_92221138_92231387
ENSMUSG00000029406.16_0	chr5	-	6604	26	FSM	ENSMUSG00000029406.16	ENST00000280562.9	6615	26	11	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124354476	124256752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124258522_124258682_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124263361_124263527_124264417_124264568_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378
ENSMUSG00000029406.16_1	chr5	-	6951	27	FSM	ENSMUSG00000029406.16	ENST00000320201.10	6959	27	8	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGTCTCATTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124387821	124256752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124258522_124258682_124259650_124259730_124259860_124259935_124260120_124260632_124260783_124260951_124261101_124261187_124261305_124261605_124261723_124262001_124262151_124262860_124263023_124263361_124263527_124265239_124265411_124266665_124266845_124267226_124267466_124268269_124268390_124268533_124268724_124269157_124269406_124271230_124271302_124271427_124271533_124273210_124273307_124274164_124274465_124278586_124278815_124280131_124280254_124281495_124281711_124290606_124290783_124354378_124354481_124387490
ENSMUSG00000029407.11_0	chr5	+	3883	24	FSM	ENSMUSG00000029407.11	ENSMUST00000031355.10	3898	24	8	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCACTTAATCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	92285804	92350647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92343206_92343294_92346194_92346294_92347675_92347784_92348993_92349210_92349715
ENSMUSG00000029407.11_6	chr5	+	3686	22	FSM	ENSMUSG00000029407.11	ENSMUST00000202155.2	3707	22	17	4	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAATCTCTGTCATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	92285821	92350653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92286023_92300299_92300387_92300710_92300776_92306262_92306340_92314389_92314491_92314884_92314988_92315136_92315193_92318531_92318653_92321784_92321964_92325293_92325435_92328400_92328490_92329198_92329354_92329756_92329969_92335093_92335205_92335556_92335676_92335801_92335984_92337081_92337204_92340571_92340711_92341870_92342035_92347675_92347784_92348993_92349210_92349715
ENSMUSG00000029408.14_0	chr5	-	3646	12	FSM	ENSMUSG00000029408.14	ENSMUST00000031354.11	3661	12	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCAAATTTGTGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	124233854	124199600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124200987_124209773_124209911_124211656_124211817_124214084_124214259_124215182_124215372_124216847_124216977_124218095_124218294_124220002_124220209_124221114_124221246_124221668_124221784_124227650_124228326_124233708
ENSMUSG00000029410.12_0	chr5	-	2829	17	FSM	ENSMUSG00000029410.12	ENSMUST00000201130.4	2878	17	23	26	23	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATAATTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92404114	92374563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92375087_92376505_92376594_92378261_92378426_92379578_92379686_92382032_92382176_92383590_92383777_92386603_92387003_92392462_92392613_92392687_92392725_92393241_92393409_92394593_92394641_92395616_92395732_92396956_92397133_92398147_92398206_92398333_92398462_92400963_92401092_92403901
ENSMUSG00000029413.15_0	chr5	-	2400	11	FSM	ENSMUSG00000029413.15	ENSMUST00000113102.10	2414	11	7	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACGAGTAAGGTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	92426022	92405524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92406803_92407412_92407491_92409210_92409240_92410367_92410435_92411268_92411332_92411449_92411623_92412939_92413017_92415900_92415992_92420302_92420430_92424777_92424943_92425770
ENSMUSG00000029414.12_1	chr5	+	6957	64	FSM	ENSMUSG00000029414.12	ENSMUST00000031366.12	6961	64	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTGGTTTCTTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	123887791	123959655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123887888_123891885_123892061_123893736_123893858_123895861_123895978_123896505_123896585_123897083_123897162_123898395_123898431_123898665_123898780_123900575_123900670_123901857_123901911_123902177_123902294_123903059_123903115_123903974_123904074_123905832_123905877_123905981_123906048_123906354_123906431_123907675_123907802_123907915_123908006_123909150_123909205_123910148_123910211_123911999_123912112_123913765_123913910_123914455_123914513_123914601_123914704_123916094_123916212_123916307_123916452_123917690_123917790_123919012_123919117_123919208_123919309_123919716_123919852_123920904_123921025_123922243_123922317_123923472_123923541_123924097_123924379_123924951_123925125_123925569_123925668_123927080_123927220_123928177_123928235_123928955_123929120_123929562_123929668_123932206_123932336_123934098_123934216_123934575_123934686_123935676_123935882_123937863_123937954_123939857_123940030_123940114_123940174_123940284_123940502_123941044_123941119_123941366_123941578_123941690_123941801_123945323_123945371_123947097_123947177_123948875_123948995_123949368_123949505_123950072_123950169_123950693_123950751_123952769_123952825_123953028_123953093_123954729_123954860_123956513_123956604_123957058_123957205_123957932_123958024_123959443
ENSMUSG00000029415.5_0	chr5	-	4989	22	FSM	ENSMUSG00000029415.5	ENSMUST00000031364.5	5020	22	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTCCTTGTGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	92457858	92431874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92434730_92436325_92436488_92437598_92437684_92437779_92437971_92438116_92438212_92438871_92438999_92439565_92439643_92439744_92439843_92440511_92440589_92441821_92441881_92443869_92443928_92444978_92445083_92446050_92446121_92447920_92448023_92449670_92449746_92450497_92450556_92451524_92451626_92451742_92451815_92452831_92452943_92453062_92453162_92453591_92453697_92457650
ENSMUSG00000029416.18_0	chr5	-	2710	8	FSM	ENSMUSG00000029416.18	ENSMUST00000031367.15	2732	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGACACCAAGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	127694467	127672736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_127673837_127677483_127677643_127678921_127679078_127680756_127680926_127681174_127681253_127681601_127681771_127685835_127686126_127693878
ENSMUSG00000029422.16_0	chr5	-	2331	12	FSM	ENSMUSG00000029422.16	ENSMUST00000050827.14	2344	12	6	7	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGTCCATTGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	123887446	123866495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUSG00000029422.16_1	chr5	-	2259	11	FSM	ENSMUSG00000029422.16	ENSMUST00000057795.12	2270	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGTCCATTGTATGC	NA	NA	NA	NA	NA	NA	NA	NA	123887467	123866495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878948_123880841_123880920_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_11	chr5	-	1676	11	FSM	ENSMUSG00000029422.16	ENSMUST00000182955.8	1685	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGACAATATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123887434	123867038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123883559_123883653_123887351
ENSMUSG00000029422.16_14	chr5	-	1577	10	FSM	ENSMUSG00000029422.16	ENSMUST00000182309.8	1595	10	10	8	8	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTTCAACCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	123887467	123867077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123867420_123868517_123868608_123869099_123869333_123871618_123871699_123874621_123874745_123877554_123877759_123878734_123878926_123881700_123881742_123883017_123883175_123887351
ENSMUSG00000029422.16_19	chr5	-	478	3	ISM	ENSMUSG00000029422.16	ENST00000559166.1	556	4	2366	7	2366	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATACAGTTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123869323	123867255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_123867420_123868517_123868608_123869099
ENSMUSG00000029422.16_20	chr5	-	547	4	FSM	ENSMUSG00000029422.16	ENST00000559166.1	556	4	2	7	2	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGATACAGTTTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123871687	123867255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123867420_123868517_123868608_123869099_123869324_123871618
ENSMUSG00000029426.9_0	chr5	-	4681	12	FSM	ENSMUSG00000029426.9	ENSMUST00000031377.9	4698	12	12	5	12	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTTTCACTGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	92653484	92589177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92592144_92594162_92594322_92596403_92596456_92597729_92597804_92599205_92599325_92601898_92602069_92602590_92602711_92607900_92607993_92608612_92608802_92609795_92609944_92633055_92633214_92653050
ENSMUSG00000029427.12_0	chr5	-	4286	14	FSM	ENSMUSG00000029427.12	ENSMUST00000031376.12	4286	14	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTGTATCCAAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	123859107	123836364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123839186_123840625_123840744_123841055_123841143_123842585_123842705_123845331_123845475_123846054_123846198_123846634_123846696_123847257_123847324_123847444_123847549_123852128_123852207_123852687_123852794_123855046_123855122_123857554_123857596_123858783
ENSMUSG00000029428.14_0	chr5	-	2914	11	FSM	ENSMUSG00000029428.14	ENSMUST00000031378.14	2939	11	11	14	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAACAAGAAATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	129085627	129061634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_129063495_129064781_129064907_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ENSMUSG00000029428.14_3	chr5	-	2747	10	FSM	ENSMUSG00000029428.14	ENSMUST00000100680.10	2769	10	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGCAAACAAGAAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	129085587	129061636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_129063495_129065865_129065977_129068027_129068166_129068266_129068341_129069243_129069353_129070558_129070633_129071859_129071935_129073425_129073526_129076573_129076652_129085457
ENSMUSG00000029430.14_0	chr5	+	2365	7	FSM	ENSMUSG00000029430.14	ENSMUST00000031383.14	2377	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	129097142	129101385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129097343_129097591_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_10	chr5	+	688	5	FSM	ENSMUSG00000029430.14	ENST00000392367.4	698	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTATAGGCAACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	129097758	129099915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129097833_129097929_129098107_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029430.14_6	chr5	+	2410	6	FSM	ENSMUSG00000029430.14	ENSMUST00000111343.2	2423	6	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTGAGTCATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	129097346	129101385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129097639_129097747_129097833_129097929_129098056_129099066_129099255_129099438_129099610_129099837
ENSMUSG00000029432.13_0	chr5	+	2102	10	FSM	ENSMUSG00000029432.13	ENSMUST00000086046.10	2112	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTTGCACGATTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	129802135	129835390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142
ENSMUSG00000029432.13_13	chr5	+	1581	11	FSM	ENSMUSG00000029432.13	ENSMUST00000186265.6	1600	11	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGATGTCTAATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	129802181	129835314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129802286_129816535_129816676_129816781_129816828_129821768_129821864_129822279_129822351_129823390_129823532_129825065_129825098_129830289_129830385_129831905_129831990_129834142_129834317_129834715
ENSMUSG00000029433.17_0	chr5	-	1560	6	FSM	ENSMUSG00000029433.17	ENSMUST00000111587.10	1576	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGGGACCAGTTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	123662229	123649773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123661317_123661445_123662133
ENSMUSG00000029433.17_4	chr5	-	741	5	FSM	ENSMUSG00000029433.17	ENST00000267169.11	758	5	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGGTGGATGGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	123661435	123650534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123650794_123655775_123655897_123656017_123656129_123658103_123658236_123661317
ENSMUSG00000029433.17_5	chr5	-	1158	5	FSM	ENSMUSG00000029433.17	ENST00000443649.9	1174	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGGTGGATGGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	123662715	123650534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123658103_123658236_123662133
ENSMUSG00000029433.17_7	chr5	-	563	4	FSM	ENSMUSG00000029433.17	ENST00000353548.11	579	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCGGTGGATGGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	123661436	123650534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123650771_123655799_123655897_123656017_123656129_123661317
ENSMUSG00000029434.13_0	chr5	-	4207	13	FSM	ENSMUSG00000029434.13	ENSMUST00000031388.13	4235	13	12	16	12	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAGAGAAAAAGAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	123711089	123666737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123669285_123669887_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029434.13_2	chr5	-	1800	13	FSM	ENSMUSG00000029434.13	ENST00000267199.9	1816	13	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGACGTGACAGGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	123711040	123669094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123669280_123669883_123670057_123671920_123672059_123673276_123673415_123674595_123674664_123685064_123685192_123696676_123696877_123701488_123701664_123703021_123703139_123707482_123707670_123708917_123709046_123709539_123709606_123710942
ENSMUSG00000029438.10_0	chr5	+	4677	6	FSM	ENSMUSG00000029438.10	ENSMUST00000031391.9	4718	6	35	6	-17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTACGAATTGTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	123482545	123513049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123482785_123489929_123490012_123494003_123494101_123499253_123499422_123507395_123507518_123509080
ENSMUSG00000029439.15_0	chr5	+	3299	18	FSM	ENSMUSG00000029439.15	ENSMUST00000053737.9	3313	18	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAGCAGCCTGGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	129578290	129648440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129578661_129581046_129581217_129581826_129581959_129584207_129584294_129590110_129590337_129591816_129591930_129593079_129593216_129616638_129616880_129618389_129618519_129619102_129619197_129620277_129620444_129626517_129626749_129627760_129627952_129631506_129631773_129637743_129637870_129646704_129646879_129647539_129647613_129648065
ENSMUSG00000029440.16_0	chr5	+	2563	6	FSM	ENSMUSG00000029440.16	ENSMUST00000100729.9	2597	6	11	23	11	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAATTTAAAAAACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	123366263	123388171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123366508_123372656_123372760_123377604_123377814_123379894_123379997_123384256_123384346_123386355
ENSMUSG00000029440.16_1	chr5	+	527	5	FSM	ENSMUSG00000029440.16	ENST00000261817.6	540	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCTGCAGGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123372669	123386395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123372760_123377604_123377814_123379894_123379997_123384259_123384346_123386355
ENSMUSG00000029446.15_0	chr5	-	1714	8	FSM	ENSMUSG00000029446.15	ENSMUST00000031399.13	1733	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGATTCAGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129864500	129842627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_129842963_129843482_129843632_129846302_129846449_129847669_129847805_129848539_129848697_129856085_129856313_129856425_129856509_129864018
ENSMUSG00000029447.14_0	chr5	+	2570	14	FSM	ENSMUSG00000029447.14	ENSMUST00000201414.5	2588	14	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	6611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTCACACTTGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	129864073	129875206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129864640_129865297_129865362_129866116_129866252_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029447.14_19	chr5	+	1526	13	FSM	ENSMUSG00000029447.14	ENST00000335503.3	1546	13	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTTCTCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129864505	129874729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129864640_129865297_129865362_129866880_129867055_129867647_129867752_129868532_129868644_129868845_129869006_129869082_129869166_129870698_129870796_129871414_129871563_129872181_129872316_129873810_129873914_129874423_129874497_129874588
ENSMUSG00000029449.12_0	chr5	-	2187	5	FSM	ENSMUSG00000029449.12	ENSMUST00000031401.6	2208	5	12	9	12	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCCACCATCATGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	123270743	123256249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123257658_123258358_123258494_123258573_123258684_123269929_123270018_123270297
ENSMUSG00000029452.19_0	chr5	+	861	8	FSM	ENSMUSG00000029452.19	ENST00000355445.7	870	8	0	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATAGTAGAAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	121601853	121633184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121601897_121602861_121602926_121605916_121606049_121627264_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ENSMUSG00000029452.19_7	chr5	+	810	7	ISM	ENSMUSG00000029452.19	ENST00000355445.7	870	8	1016	9	1016	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATAGTAGAAGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	121602869	121633184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_121602926_121605916_121606049_121627264_121627395_121629138_121629278_121631693_121631839_121632266_121632341_121633050
ENSMUSG00000029454.16_0	chr5	-	2217	14	FSM	ENSMUSG00000029454.16	ENSMUST00000031410.14	2234	14	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTGCTATATAGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	121683955	121663104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121663303_121663725_121663831_121664801_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUSG00000029454.16_2	chr5	-	1512	14	FSM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTTAAAGTTGCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	121683263	121663111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564_121678639_121683227
ENSMUSG00000029454.16_3	chr5	-	1460	13	ISM	ENSMUSG00000029454.16	ENSMUST00000111783.8	1513	14	4641	1	4641	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCTTAAAGTTGCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	121678622	121663111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_121663303_121663725_121663831_121664807_121664924_121665153_121665285_121666932_121667054_121669595_121669784_121671371_121671453_121672397_121672494_121673916_121674007_121675174_121675284_121676455_121676554_121677234_121677311_121678564
ENSMUSG00000029455.15_13	chr5	-	1148	9	FSM	ENSMUSG00000029455.15	ENST00000416293.7	1155	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAGCTGCTCCTCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	121718777	121708665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121718676
ENSMUSG00000029455.15_2	chr5	-	3849	13	FSM	ENSMUSG00000029455.15	ENSMUST00000031411.15	3867	13	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCATATGCCTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	121731877	121704097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121706087_121706988_121707104_121708666_121708825_121710079_121710245_121710738_121710924_121711485_121711589_121713153_121713268_121713958_121714088_121714519_121714632_121716405_121716486_121717666_121717808_121718676_121718782_121731424
ENSMUSG00000029456.13_0	chr5	-	3803	21	FSM	ENSMUSG00000029456.13	ENSMUST00000031412.12	3826	21	16	7	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATATCCTGTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	121798526	121759095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794318_121798163
ENSMUSG00000029456.13_1	chr5	-	3615	21	FSM	ENSMUSG00000029456.13	ENSMUST00000111770.2	3626	21	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTATATCCTGTTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	121798571	121759095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121759443_121760052_121760131_121760741_121760886_121764110_121764284_121765327_121765487_121767963_121768055_121768160_121768299_121768707_121768849_121769339_121769741_121770551_121770726_121772739_121772886_121775306_121775458_121777186_121777369_121780674_121780744_121783431_121783574_121784764_121784925_121785897_121786057_121787416_121787612_121790018_121790168_121794076_121794277_121798355
ENSMUSG00000029458.15_1	chr5	+	3728	12	FSM	ENSMUSG00000029458.15	ENSMUST00000031414.15	3744	12	7	9	7	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTACGTTTGAGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	121798632	121825310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191
ENSMUSG00000029458.15_3	chr5	+	2907	13	FSM	ENSMUSG00000029458.15	ENST00000419234.9	2917	13	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAAATTACCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	121798669	121825323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121798912_121800062_121800225_121801358_121801555_121803161_121803352_121810147_121810262_121813292_121813442_121816826_121816903_121817273_121817413_121817879_121817990_121820842_121820933_121822433_121822538_121823191_121823539_121824335
ENSMUSG00000029461.18_0	chr7	+	6376	9	FSM	ENSMUSG00000029461.18	ENSMUST00000107042.9	6388	9	10	2	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGTTTGATCAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	100355851	100490586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100467942_100467970_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ENSMUSG00000029461.18_1	chr7	+	6575	9	FSM	ENSMUSG00000029461.18	ENSMUST00000049053.9	6609	9	6	28	6	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	100355914	100490835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100356101_100363321_100363362_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ENSMUSG00000029461.18_3	chr7	+	4060	8	FSM	ENSMUSG00000029461.18	ENSMUST00000207875.2	4077	8	7	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100355933	100488379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100356101_100436010_100436099_100462126_100462208_100473338_100473465_100480534_100480678_100483215_100483391_100484533_100484665_100485230
ENSMUSG00000029462.19_0	chr5	+	2700	4	FSM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	9	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTATTTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	122492440	122503040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122492540_122498075_122498268_122500098_122500335_122500867
ENSMUSG00000029462.19_3	chr5	+	1002	5	FSM	ENSMUSG00000029462.19	ENSMUST00000118830.8	1014	5	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGACTTTCTTGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122492455	122501345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122492540_122494856_122494869_122498075_122498268_122500098_122500335_122500867
ENSMUSG00000029462.19_9	chr5	+	2599	3	ISM	ENSMUSG00000029462.19	ENSMUST00000155671.8	2716	4	5643	10	5590	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTATTATTTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	122498074	122503037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_122498268_122500098_122500335_122500867
ENSMUSG00000029463.6_0	chr5	-	1369	7	FSM	ENSMUSG00000029463.6	ENSMUST00000031419.6	1388	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAACTGAATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	122510417	122502651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122502983_122504376_122504460_122505410_122505583_122505661_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUSG00000029463.6_1	chr5	-	1365	7	NNC	ENSMUSG00000029463.6	novel	1388	7	NA	NA	18	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAACTGAATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	122510409	122502651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_-_122502983_122504376_122504460_122505410_122505583_122505657_122505792_122507579_122507702_122508577_122508637_122509945
ENSMUSG00000029464.11_0	chr5	+	1569	8	FSM	ENSMUSG00000029464.11	ENSMUST00000031420.11	1592	8	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAAGAAGAAAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	122510521	122520950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122510720_122511973_122512083_122516529_122516698_122518043_122518169_122519252_122519369_122519460_122519558_122520110_122520240_122520323
ENSMUSG00000029465.15_0	chr5	+	878	7	FSM	ENSMUSG00000029465.15	ENSMUST00000102525.11	899	7	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGCTTACACACACT	NA	NA	NA	NA	NA	NA	NA	NA	122529949	122544230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122530061_122534879_122534980_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
ENSMUSG00000029465.15_2	chr5	+	779	6	FSM	ENSMUSG00000029465.15	ENSMUST00000111716.8	838	6	51	8	51	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTAGACATTGAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	122538384	122544201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122538526_122539709_122539787_122541421_122541491_122542186_122542314_122543146_122543242_122543931
ENSMUSG00000029466.12_0	chr5	+	2935	12	FSM	ENSMUSG00000029466.12	ENSMUST00000122010.8	2950	12	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTACCAGTGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122559767	122582972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122559914_122560465_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_3	chr5	+	2730	11	FSM	ENSMUSG00000029466.12	ENSMUST00000031422.10	2751	11	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTACCAGTGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	122560524	122582972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352_122579504_122581866
ENSMUSG00000029466.12_7	chr5	+	3591	10	FSM	ENSMUSG00000029466.12	ENSMUST00000119792.2	3599	10	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGATGAGTGTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	122560547	122581493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122560742_122566193_122566381_122567548_122567669_122570803_122570916_122571446_122571601_122573581_122573725_122576191_122576310_122577381_122577579_122578148_122578374_122579352
ENSMUSG00000029467.16_0	chr5	-	3984	21	FSM	ENSMUSG00000029467.16	ENSMUST00000177974.8	3984	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAGCTGTGGCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	122639958	122591576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122592368_122595365_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUSG00000029467.16_4	chr5	-	4470	20	FSM	ENSMUSG00000029467.16	ENSMUST00000031423.10	4486	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGGACAGAGAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	122640278	122594408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122595490_122595574_122595693_122596150_122596285_122596510_122596597_122597510_122597714_122598038_122598260_122598703_122599040_122599628_122599848_122599925_122600049_122604012_122604145_122604890_122604994_122605769_122605859_122607412_122607878_122609230_122609317_122611272_122611354_122627300_122627440_122629743_122629849_122638793_122638877_122638993_122639012_122639630
ENSMUSG00000029468.18_0	chr5	+	4887	13	FSM	ENSMUSG00000029468.18	ENSMUST00000100737.10	4936	13	39	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATTTATTTAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	122782012	122822342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122818869
ENSMUSG00000029468.18_1	chr5	+	2552	13	FSM	ENSMUSG00000029468.18	ENSMUST00000121489.8	2576	13	15	9	-13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGAATTCTCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	122781988	122822351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122795074_122795148_122796770_122796868_122801639_122801721_122802607_122802738_122804206_122804344_122808500_122808592_122811417_122811484_122811728_122811879_122814724_122814827_122821237
ENSMUSG00000029468.18_4	chr5	+	668	4	FSM	ENSMUSG00000029468.18	ENSMUST00000086247.6	712	4	11	33	11	-33	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAACAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	122782082	122793292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122782262_122790789_122790959_122792223_122792293_122793041
ENSMUSG00000029469.15_0	chr5	-	2935	19	FSM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATGTTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	122752575	122688275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005_122749171_122752500
ENSMUSG00000029469.15_1	chr5	-	2868	18	ISM	ENSMUSG00000029469.15	ENSMUST00000031426.14	2950	19	3411	1	3411	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTCTTTTTACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	122749170	122688267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_122689267_122693559_122693606_122697217_122697304_122697759_122697832_122698721_122698809_122705323_122705414_122706973_122707103_122710702_122710853_122729142_122729290_122731112_122731209_122732587_122732752_122738502_122738588_122740330_122740442_122740747_122740814_122745030_122745121_122747235_122747417_122748140_122748245_122749005
ENSMUSG00000029470.16_0	chr5	+	2683	12	FSM	ENSMUSG00000029470.16	ENSMUST00000031429.14	2702	12	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCACTGCTGGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	122845619	122867795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122862656_122862738_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029470.16_1	chr5	+	1874	11	FSM	ENSMUSG00000029470.16	ENSMUST00000081554.13	1887	11	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGATCCTTGTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	122845655	122867103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122845851_122852461_122852610_122856375_122856448_122856563_122856637_122857192_122857290_122863052_122863195_122863292_122863430_122865260_122865355_122865461_122865528_122865807_122865904_122866349
ENSMUSG00000029471.14_0	chr5	-	4841	17	FSM	ENSMUSG00000029471.14	ENSMUST00000111668.8	4861	17	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGCAAAGCCCGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	122917434	122869241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122872309_122875050_122875094_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUSG00000029471.14_3	chr5	-	2721	16	FSM	ENSMUSG00000029471.14	ENSMUST00000200109.5	2751	16	6	24	-2	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTGGCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122917390	122871274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122872309_122875495_122875597_122880162_122880292_122881932_122882021_122882120_122882195_122883770_122883825_122884312_122884513_122886016_122886106_122886240_122886263_122888077_122888115_122891761_122891896_122894665_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUSG00000029471.14_5	chr5	-	1067	5	FSM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCTGAATGTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	122917382	122894349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836_122902366_122917314
ENSMUSG00000029471.14_6	chr5	-	982	4	ISM	ENSMUSG00000029471.14	ENSMUST00000196742.2	1084	5	15032	19	15032	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATCAAAAAGCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	122902356	122894357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_122894718_122895622_122895677_122897015_122897064_122901836
ENSMUSG00000029472.14_0	chr5	-	2733	17	FSM	ENSMUSG00000029472.14	ENSMUST00000086216.9	2760	17	12	15	12	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTAAAAATAAAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122959390	122925536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938696_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029472.14_11	chr5	-	2398	17	FSM	ENSMUSG00000029472.14	ENSMUST00000197074.5	2413	17	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGGGTTTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	122959328	122925785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938672_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029472.14_13	chr5	-	2393	17	FSM	ENSMUSG00000029472.14	ENSMUST00000200645.5	2404	17	8	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTGTCTGAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	122959349	122925796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122926082_122926364_122926528_122929670_122929819_122929889_122929998_122931499_122931622_122932479_122932555_122937401_122937538_122938513_122938657_122940192_122940283_122940885_122940968_122944307_122944499_122945362_122945465_122952611_122952679_122955883_122956068_122956916_122957027_122957670_122957751_122959042
ENSMUSG00000029474.8_0	chr5	+	4423	6	FSM	ENSMUSG00000029474.8	ENSMUST00000031434.8	4440	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACGACGGCTGCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	122988120	123009347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122988362_122999751_122999971_123002049_123002458_123004864_123004970_123005182_123005385_123006099
ENSMUSG00000029475.18_1	chr5	-	3500	12	FSM	ENSMUSG00000029475.18	ENSMUST00000031435.14	3532	12	13	19	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTGTACAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	123038405	123008749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123009961_123016497_123016717_123017307_123017470_123017551_123017716_123018235_123018916_123019082_123019122_123019699_123019814_123020026_123020288_123020464_123020552_123021381_123021526_123026592_123026818_123038211
ENSMUSG00000029475.18_2	chr5	-	996	5	FSM	ENSMUSG00000029475.18	ENST00000543852.5	1020	5	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	123089953	123075076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123075552_123079015_123079132_123085789_123085944_123087132_123087227_123089796
ENSMUSG00000029478.17_0	chr5	-	8839	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111402.9	8862	48	15	8	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTCTACTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125256263	125094224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ENSMUSG00000029478.17_1	chr5	-	8780	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111398.8	8808	48	20	8	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTCTACTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125256263	125094224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125230670_125230717_125256060
ENSMUSG00000029478.17_4	chr5	-	8638	48	FSM	ENSMUSG00000029478.17	ENSMUST00000111393.8	8661	48	17	6	17	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTTCTACTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125256227	125094224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105675_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114125_125114231_125114337_125114444_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125230670_125230717_125256060
ENSMUSG00000029478.17_5	chr5	-	8565	47	FSM	ENSMUSG00000029478.17	ENSMUST00000086083.11	8575	47	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGTGACAACGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125256117	125094235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833_125202045_125256060
ENSMUSG00000029478.17_7	chr5	-	8509	46	ISM	ENSMUSG00000029478.17	ENSMUST00000086083.11	8575	47	54076	6	-77	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACAACGTTTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	125202041	125094231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_125095413_125095874_125096055_125096882_125097111_125099934_125099989_125100564_125100711_125101196_125101347_125102072_125102267_125102481_125102628_125102715_125102869_125103865_125104282_125105684_125105863_125105945_125106078_125106183_125106334_125107035_125107291_125107749_125107972_125109078_125109434_125110389_125110686_125111047_125111129_125111419_125111561_125113039_125113191_125113884_125113983_125114337_125114441_125114924_125115062_125115952_125116118_125118859_125119029_125119808_125119930_125125003_125125599_125126405_125126460_125127974_125128123_125132796_125132940_125142903_125142967_125144839_125145013_125145995_125146142_125156071_125156171_125158193_125158249_125161944_125162124_125163904_125163999_125164857_125165031_125168717_125168785_125175010_125175064_125179706_125179764_125183262_125183377_125186956_125187137_125195680_125195859_125196545_125196674_125201833
ENSMUSG00000029480.14_0	chr5	-	4754	27	FSM	ENSMUSG00000029480.14	ENSMUST00000169485.6	4760	27	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGACTATGCTCTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	125511179	125490921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125492231_125492364_125492463_125492929_125493004_125493087_125493183_125493363_125493502_125493595_125493711_125494485_125494659_125495513_125495631_125495722_125495848_125496024_125496214_125496297_125496405_125498071_125498184_125499182_125499416_125499668_125499746_125500490_125500636_125501688_125501766_125502002_125502099_125502485_125502601_125502735_125502838_125503714_125503829_125504496_125504594_125505377_125505471_125506225_125506375_125506768_125507109_125507882_125507996_125508660_125508831_125510998
ENSMUSG00000029482.5_0	chr5	+	3221	18	FSM	ENSMUSG00000029482.5	ENSMUST00000031445.5	3239	18	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTGCAGTACGCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125552889	125594468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_125553174_125559893_125559998_125561600_125561722_125566846_125566961_125571970_125572069_125580246_125580362_125580612_125580695_125583212_125583361_125585740_125585822_125586842_125586968_125588703_125588769_125588909_125589033_125589688_125589803_125590165_125590292_125590982_125591053_125591232_125591292_125591991_125592195_125593279
ENSMUSG00000029484.13_0	chr5	+	1579	13	FSM	ENSMUSG00000029484.13	ENSMUST00000031447.12	1595	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCTCTGGGTGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	96941253	96993819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_96941423_96945259_96945313_96958908_96958997_96960700_96960796_96964199_96964314_96968260_96968352_96972745_96972826_96976206_96976264_96976555_96976650_96978251_96978348_96982633_96982693_96986151_96986275_96993359
ENSMUSG00000029486.14_0	chr5	+	3550	10	FSM	ENSMUSG00000029486.14	ENSMUST00000117766.8	3556	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTATTATATGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	96357351	96414580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_96357425_96357939_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029486.14_4	chr5	+	3431	9	FSM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATCTTTATTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	96357973	96414568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_96358053_96361645_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029486.14_8	chr5	+	3345	8	ISM	ENSMUSG00000029486.14	ENSMUST00000036437.13	3431	9	3670	9	3641	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTTTAAAATTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	96361643	96414559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_96361770_96371629_96371892_96374143_96374228_96375538_96375611_96379539_96379652_96386697_96386805_96409920_96410003_96412059
ENSMUSG00000029490.5_0	chr5	-	923	7	FSM	ENSMUSG00000029490.5	ENST00000515118.5	933	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATCCTCTTCACCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	108593951	108590030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108590128_108590889_108591000_108591304_108591463_108591720_108591874_108592336_108592454_108592537_108592676_108593801
ENSMUSG00000029499.12_0	chr5	-	1024	5	FSM	ENSMUSG00000029499.12	ENSMUST00000031472.12	1041	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGGTGTGGTTTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	110434041	110422153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110422495_110425520_110425641_110429062_110429226_110431511_110431620_110433749
ENSMUSG00000029499.12_1	chr5	-	282	3	FSM	ENSMUSG00000029499.12	ENST00000537262.1	296	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATGTCAGATACACCG	NA	NA	NA	NA	NA	NA	NA	NA	110431610	110422431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110422495_110425520_110425641_110431511
ENSMUSG00000029499.12_2	chr5	-	184	2	ISM	ENSMUSG00000029499.12	ENST00000537262.1	296	3	5977	6	5977	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATGTCAGATACACCG	NA	NA	NA	NA	NA	NA	NA	NA	110425641	110422431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_110422495_110425520
ENSMUSG00000029500.17_0	chr5	-	2076	6	FSM	ENSMUSG00000029500.17	ENSMUST00000112505.9	2098	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGAAAAAGTAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110417768	110407006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110408304_110413377_110413512_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUSG00000029500.17_2	chr5	-	2035	6	FSM	ENSMUSG00000029500.17	ENSMUST00000059229.16	2044	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTTGTTTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110417744	110407020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110408304_110413377_110413509_110413605_110413695_110413776_110413903_110414952_110415132_110417517
ENSMUSG00000029501.15_0	chr5	+	4061	13	FSM	ENSMUSG00000029501.15	ENSMUST00000197188.5	4077	13	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGAGTTTAGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	110378880	110403330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ENSMUSG00000029501.15_1	chr5	+	4996	14	FSM	ENSMUSG00000029501.15	ENSMUST00000086674.10	5025	14	19	10	-18	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCACATTGATGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	110378888	110404507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385520_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110400664_110400897_110401209_110401648_110401781_110402166
ENSMUSG00000029501.15_3	chr5	+	5194	13	FSM	ENSMUSG00000029501.15	ENSMUST00000031474.11	5215	13	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGCACATTGATGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	110378921	110404507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110379290_110382212_110382687_110384138_110384346_110385523_110385718_110385812_110386002_110389794_110389918_110392369_110392437_110397196_110397367_110398566_110398674_110399362_110399554_110400577_110401209_110401648_110401781_110402166
ENSMUSG00000029502.15_0	chr5	+	8123	24	FSM	ENSMUSG00000029502.15	ENSMUST00000112512.8	8132	24	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTTCATAATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	110324572	110374333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110324789_110329468_110329780_110332203_110332354_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUSG00000029502.15_8	chr5	+	4797	24	FSM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTAAATTTCCCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	110324744	110371059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110324789_110329468_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUSG00000029502.15_9	chr5	+	4749	23	ISM	ENSMUSG00000029502.15	ENSMUST00000031477.9	4805	24	4723	13	4723	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACATTTAAATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	110329467	110371054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_110329780_110332203_110332474_110333651_110333765_110335206_110335854_110336528_110336641_110337471_110337779_110340772_110340976_110341484_110341623_110349696_110349859_110350434_110350804_110351585_110351664_110352645_110352910_110353642_110353738_110355421_110355639_110356305_110356450_110357640_110357839_110360096_110360214_110364699_110364840_110365676_110365810_110365959_110366083_110368647_110368810_110369489_110369654_110370773
ENSMUSG00000029503.17_0	chr5	-	1224	9	FSM	ENSMUSG00000029503.17	ENST00000352418.8	1242	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGATCTCATCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	110490811	110488066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110488449_110488533_110488600_110488721_110488816_110488966_110489098_110489416_110489556_110489639_110489721_110489870_110489968_110490365_110490502_110490713
ENSMUSG00000029503.17_2	chr5	-	1127	8	ISM	ENSMUSG00000029503.17	ENST00000352418.8	1242	9	319	8	319	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGATCTCATCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	110490502	110488066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_110488449_110488533_110488600_110488721_110488816_110488966_110489098_110489416_110489556_110489639_110489721_110489870_110489968_110490365
ENSMUSG00000029504.6_0	chr5	+	4828	15	FSM	ENSMUSG00000029504.6	ENSMUST00000031478.6	4846	15	18	0	18	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTTTACCCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	110801334	110808362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110801655_110801743_110801878_110802333_110802485_110802734_110802881_110802957_110803030_110803172_110803280_110803430_110803540_110803625_110803772_110803905_110804099_110804196_110804313_110804390_110804508_110804681_110804784_110804953_110805018_110805116_110805252_110805446
ENSMUSG00000029505.18_0	chr5	-	10602	52	FSM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	0	6	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	110918393	110812244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ENSMUSG00000029505.18_1	chr5	-	10561	51	ISM	ENSMUSG00000029505.18	ENSMUST00000041558.15	10608	52	13766	6	13394	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	110904627	110812244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110903262
ENSMUSG00000029505.18_10	chr5	-	10674	51	FSM	ENSMUSG00000029505.18	ENSMUST00000112436.9	10685	51	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTTCTTGTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	110918575	110812246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816612_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839682_110841031_110841202_110841285_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110889835_110889927_110903262_110904633_110918357
ENSMUSG00000029505.18_2	chr5	-	10405	52	FSM	ENSMUSG00000029505.18	ENSMUST00000112435.9	10420	52	9	6	9	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTTGTTCTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	110918574	110812244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110813941_110814405_110814484_110815333_110815481_110815928_110816057_110816415_110816591_110818740_110818963_110820974_110821160_110821272_110821481_110822726_110822837_110822909_110822956_110824316_110824614_110824725_110824805_110827829_110827887_110828007_110828145_110830664_110830839_110831001_110831244_110831711_110831866_110831952_110831998_110832398_110832534_110832942_110833027_110833217_110833377_110835663_110835808_110836057_110836170_110839484_110839535_110841436_110841489_110843138_110843405_110843818_110843914_110845074_110845234_110846617_110846783_110849486_110849657_110851317_110851485_110852747_110852935_110855794_110855932_110856028_110856204_110856639_110856810_110858896_110859034_110866952_110867131_110867298_110867490_110868601_110868710_110872287_110872378_110874756_110874815_110875394_110875445_110877099_110877179_110877688_110877830_110881584_110881771_110883215_110883513_110887161_110887548_110888047_110888156_110889835_110889927_110901669_110901781_110903262_110904633_110918357
ENSMUSG00000029505.18_24	chr5	-	3666	5	FSM	ENSMUSG00000029505.18	ENSMUST00000146458.9	3673	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAATAAAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	110918445	110885538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110887548_110888047_110888156_110889835_110889927_110903262_110904633_110918357
ENSMUSG00000029507.17_0	chr5	-	1804	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	1	9	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110928461	110921541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928105
ENSMUSG00000029507.17_1	chr5	-	1853	7	FSM	ENSMUSG00000029507.17	ENSMUST00000086643.12	1868	7	6	9	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110928456	110921541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110924419_110924474_110925479_110925618_110927552_110927764_110928105
ENSMUSG00000029507.17_2	chr5	-	1548	6	FSM	ENSMUSG00000029507.17	ENSMUST00000031481.13	1563	6	6	9	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110928519	110921541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928419
ENSMUSG00000029507.17_3	chr5	-	1500	6	FSM	ENSMUSG00000029507.17	ENSMUST00000170468.8	1510	6	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110928479	110921541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552_110927764_110928427
ENSMUSG00000029507.17_4	chr5	-	1380	4	FSM	ENSMUSG00000029507.17	ENSMUST00000112426.8	1389	4	1	8	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATTATTCTTTGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	110927832	110921540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110921846_110922387_110923080_110923401_110923505_110927552
ENSMUSG00000029507.17_5	chr5	-	1437	5	ISM	ENSMUSG00000029507.17	ENSMUST00000031483.15	1814	6	710	9	81	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATTATTCTTTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	110927752	110921541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_110921846_110922387_110923080_110923401_110923505_110925479_110925618_110927552
ENSMUSG00000029512.12_0	chr5	-	5195	28	FSM	ENSMUSG00000029512.12	ENSMUST00000031490.11	5213	28	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTATGTGGTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	110957953	110932361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110934094_110934165_110934302_110934949_110935108_110935439_110935559_110935638_110935812_110935975_110936167_110936594_110936739_110936813_110936924_110937207_110937402_110938077_110938347_110938715_110938803_110938917_110939064_110939466_110939593_110939967_110940058_110940262_110940324_110940831_110940980_110941680_110941770_110942058_110942110_110942450_110942534_110942612_110942672_110943597_110943700_110944021_110944096_110944192_110944367_110946747_110946785_110946989_110947023_110956870_110956913_110956992_110957086_110957479
ENSMUSG00000029513.15_0	chr5	-	2077	7	FSM	ENSMUSG00000029513.15	ENSMUST00000031486.14	2089	7	6	6	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACTTTTGACTCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	116162515	116151650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149
ENSMUSG00000029513.15_1	chr5	-	2011	8	FSM	ENSMUSG00000029513.15	ENSMUST00000111999.8	2026	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGAGTAACTTTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	116162558	116151654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116152786_116152972_116153042_116156006_116156141_116158062_116158178_116158432_116158527_116159541_116159706_116162149_116162319_116162423
ENSMUSG00000029516.20_11	chr5	+	1649	11	FSM	ENSMUSG00000029516.20	ENST00000612548.4	1663	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCGATGTATTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115989215	116144919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064560_116144609
ENSMUSG00000029516.20_18	chr5	+	7831	39	FSM	ENSMUSG00000029516.20	ENST00000678087.1	7852	39	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGAAATAAAGCAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	116045560	116146951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_116045894_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029516.20_28	chr5	+	7758	40	FSM	ENSMUSG00000029516.20	ENST00000678652.1	7782	40	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAATAAAGCAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	116045760	116146952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_116045894_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029516.20_3	chr5	+	9472	47	FSM	ENSMUSG00000029516.20	ENSMUST00000051704.15	9514	47	10	32	10	8	multi-exon	TRUE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115983712	116146974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115984526_115989210_115989353_115997256_115997433_116001016_116001119_116011910_116012054_116013947_116014039_116022924_116023129_116024712_116024867_116046696_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123870_116124617_116124723_116124952_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029516.20_45	chr5	+	7493	38	FSM	ENSMUSG00000029516.20	ENST00000678677.1	7517	38	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAATAAAGCAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	116046615	116146952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_116046881_116063452_116063559_116064517_116064662_116065894_116066015_116071456_116071628_116071879_116071931_116072637_116072692_116074787_116074929_116076737_116076864_116079895_116079992_116083843_116083961_116084888_116084999_116085965_116086141_116090510_116090709_116099202_116099257_116105946_116106145_116107022_116107217_116109301_116109438_116111786_116111892_116117413_116117555_116117820_116117929_116119753_116119872_116120141_116120307_116122850_116122989_116123463_116123645_116123777_116123860_116125050_116125123_116126214_116126296_116126456_116126593_116128386_116128527_116130669_116130763_116132046_116132156_116132270_116132400_116133451_116133533_116135550_116135630_116135732_116135913_116143840_116144151_116144363
ENSMUSG00000029517.14_0	chr6	+	1179	6	FSM	ENSMUSG00000029517.14	ENSMUST00000031489.10	1190	6	2	9	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAAATTCTATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18866318	18879576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_18866727_18867980_18868096_18868242_18868417_18869231_18869339_18869892_18870031_18879339
ENSMUSG00000029518.16_0	chr5	+	2800	6	FSM	ENSMUSG00000029518.16	ENSMUST00000031492.15	2820	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCCTCCTAGGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115769979	115785788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115770258_115775774_115775826_115778138_115778263_115781426_115781552_115781633_115781759_115783691
ENSMUSG00000029521.8_0	chr5	+	2264	15	FSM	ENSMUSG00000029521.8	ENSMUST00000066160.3	2276	15	0	12	0	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAATGTTAGTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	110987865	111021999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110987915_110989071_110989410_110996254_110996380_110996495_110996644_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873_111015960_111019892_111019974_111021345
ENSMUSG00000029521.8_10	chr5	+	1063	10	FSM	ENSMUSG00000029521.8	ENST00000403642.5	1079	10	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGTACGAGGCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	110989213	111015957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110989410_110997461_110997553_111003590_111003700_111006239_111006294_111008728_111008791_111011123_111011224_111013387_111013475_111014128_111014293_111014803_111014920_111015873
ENSMUSG00000029521.8_20	chr5	+	326	3	FSM	ENSMUSG00000029521.8	ENST00000554701.2	336	3	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGTACGAGGCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	111014138	111015957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_111014293_111014831_111014920_111015873
ENSMUSG00000029522.13_0	chr5	+	557	4	FSM	ENSMUSG00000029522.13	ENSMUST00000031495.11	557	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGATTGTTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	115604324	115612781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115604380_115608840_115609001_115610051_115610180_115612567
ENSMUSG00000029522.13_1	chr5	+	470	3	ISM	ENSMUSG00000029522.13	ENSMUST00000031495.11	557	4	4535	13	4529	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCAGAGCCTGGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	115608859	115612768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_115609001_115610051_115610180_115612567
ENSMUSG00000029524.17_0	chr5	-	1775	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112066.2	1794	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGCATAACAAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115622775	115616078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622390
ENSMUSG00000029524.17_1	chr5	-	1633	5	FSM	ENSMUSG00000029524.17	ENSMUST00000112067.8	1645	5	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGCATAACAAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115622354	115616078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115616468_115617660_115617872_115618289_115618585_115620682_115621178_115622111
ENSMUSG00000029528.20_0	chr5	+	3682	11	FSM	ENSMUSG00000029528.20	ENSMUST00000067268.15	3706	11	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGAGCTGATGTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	115644752	115694040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115644928_115682401_115682629_115682939_115683056_115683430_115683568_115683662_115683865_115684871_115685008_115689909_115690081_115690162_115690337_115690822_115690905_115691036_115691186_115691927
ENSMUSG00000029534.18_0	chr6	+	2181	16	FSM	ENSMUSG00000029534.18	ENSMUST00000115419.8	2194	16	6	7	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCAAGAACCTGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	17693998	17943014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922124_17930764_17930858_17934117_17934258_17942668
ENSMUSG00000029534.18_2	chr6	+	2036	15	FSM	ENSMUSG00000029534.18	ENSMUST00000052113.12	2046	15	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGACTGATCAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	17694039	17942964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17694362_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ENSMUSG00000029534.18_4	chr6	+	2271	16	FSM	ENSMUSG00000029534.18	ENSMUST00000053148.14	2288	16	12	5	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGTGTCGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17749180	17943019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17749614_17819248_17819332_17834615_17834776_17844907_17844963_17846197_17846314_17848002_17848079_17850355_17850425_17852256_17852412_17854929_17855028_17886002_17886118_17904895_17904969_17906406_17906510_17921987_17922139_17930764_17930858_17934117_17934258_17942668
ENSMUSG00000029535.5_0	chr5	+	1077	2	FSM	ENSMUSG00000029535.5	ENSMUST00000031508.5	1088	2	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTGCACTTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	115479290	115481624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115479477_115480733
ENSMUSG00000029536.9_0	chr5	-	1787	3	FSM	ENSMUSG00000029536.9	ENSMUST00000139167.3	1797	3	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTGGTGCTGATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	115479229	115471299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115472654_115473525_115473630_115478900
ENSMUSG00000029538.15_0	chr5	+	1146	4	FSM	ENSMUSG00000029538.15	ENSMUST00000031513.14	1162	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATTGGCGTGCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115465246	115471134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115465559_115468556_115468718_115470175_115470349_115470634
ENSMUSG00000029545.14_0	chr5	-	1855	10	FSM	ENSMUSG00000029545.14	ENSMUST00000031524.11	1870	10	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCCTGTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	115257391	115248358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250087_115250298_115250451_115250823_115250936_115251122_115251273_115255623_115255788_115257283
ENSMUSG00000029545.14_2	chr5	-	1123	8	FSM	ENSMUSG00000029545.14	ENST00000411593.2	1141	8	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCCTCCTCGGGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	115255776	115248913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115249066_115249152_115249210_115249377_115249474_115249695_115249834_115249915_115250171_115250813_115250936_115251122_115251273_115255623
ENSMUSG00000029547.11_0	chr5	-	7084	47	FSM	ENSMUSG00000029547.11	ENSMUST00000072607.9	7102	47	18	0	-17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTGTCCTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139761410	139737036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757479_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ENSMUSG00000029547.11_4	chr5	-	7060	47	FSM	ENSMUSG00000029547.11	ENSMUST00000200393.5	7070	47	10	0	10	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTGTGGTGTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	139761383	139737039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139737389_139737464_139737575_139737692_139737785_139737975_139738047_139738466_139738581_139739215_139739329_139739828_139739957_139740661_139740855_139740931_139741066_139741631_139741756_139741889_139742117_139742198_139742287_139742815_139742947_139743342_139743467_139743543_139743731_139743849_139743991_139744184_139744345_139744890_139745146_139745501_139745627_139745837_139745937_139746408_139746556_139747037_139747200_139747777_139747890_139748082_139748251_139748368_139748474_139748562_139748743_139749759_139749910_139749982_139750163_139750422_139750553_139750798_139750997_139751991_139752053_139752184_139752277_139753157_139753255_139753475_139753634_139754173_139754252_139754618_139754740_139755053_139755163_139755817_139755995_139756804_139756947_139757044_139757191_139757291_139757485_139757570_139757677_139757771_139757932_139758110_139758249_139758352_139758550_139760042_139760334_139761086
ENSMUSG00000029550.12_0	chr5	+	3202	11	FSM	ENSMUSG00000029550.12	ENSMUST00000031530.9	3204	11	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTGGTCCTGACTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	115149196	115236848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115149675_115199620_115199699_115212873_115212963_115220279_115220400_115221483_115221563_115222911_115223025_115226348_115226456_115226881_115227046_115233109_115233310_115233904_115234015_115235184
ENSMUSG00000029551.14_0	chr5	-	862	3	FSM	ENSMUSG00000029551.14	ENSMUST00000031531.14	883	3	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATCCTGAGACATCATG	NA	NA	NA	NA	NA	NA	NA	NA	139812624	139809351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139809829_139811882_139812120_139812476
ENSMUSG00000029551.14_4	chr5	-	673	2	ISM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	486	18	486	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATCTAAAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	139812112	139809385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_139809829_139811882
ENSMUSG00000029551.14_5	chr5	-	727	3	FSM	ENSMUSG00000029551.14	ENSMUST00000182602.2	733	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTACTTGGCTGGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	139812598	139809373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139809829_139811882_139812120_139812563
ENSMUSG00000029552.20_0	chr6	+	2425	7	FSM	ENSMUSG00000029552.20	ENSMUST00000115467.11	2440	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAATAATTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17065157	17105817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17065313_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUSG00000029552.20_8	chr6	+	2670	9	FSM	ENSMUSG00000029552.20	ENSMUST00000076654.9	2685	9	5	10	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAATAATTGTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17065227	17105817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_17065313_17080917_17081066_17082475_17082643_17086135_17086222_17096126_17096380_17097259_17097590_17099702_17099919_17100280_17100440_17104591
ENSMUSG00000029553.11_0	chr6	-	1723	4	FSM	ENSMUSG00000029553.11	ENST00000393485.5	1730	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAACTCTCTGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	16845470	16833866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_16835349_16840467_16840544_16844193_16844251_16845362
ENSMUSG00000029554.16_0	chr5	-	2584	17	ISM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	6409	1	-4405	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCCAAGGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	140300898	139994444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744
ENSMUSG00000029554.16_1	chr5	-	2639	18	FSM	ENSMUSG00000029554.16	ENSMUST00000031534.9	2640	18	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCCAAGGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	140307307	139994444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179814_140247252_140247340_140281541_140281604_140285969_140286085_140286188_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349_140296491_140300744_140300908_140307261
ENSMUSG00000029554.16_8	chr5	-	1927	14	FSM	ENSMUSG00000029554.16	ENST00000265854.12	1940	14	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCTATCTAGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	140296485	139994884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139995030_140051568_140051760_140074384_140074593_140091269_140091361_140102991_140103081_140118523_140118581_140129674_140129816_140179668_140179956_140185328_140185369_140286164_140286320_140288669_140288752_140289327_140289453_140293345_140293526_140296349
ENSMUSG00000029556.13_0	chr5	-	2095	9	FSM	ENSMUSG00000029556.13	ENST00000541395.5	2102	9	7	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCACCTGACACAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	115108919	115088014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115088245_115088752_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029556.13_6	chr5	-	2002	10	FSM	ENSMUSG00000029556.13	ENST00000544413.2	2017	10	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATCTGAGCCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	115108906	115088032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115088245_115088752_115088923_115088984_115089104_115090637_115090830_115091385_115091588_115091697_115091847_115093308_115093551_115093874_115094062_115098074_115098275_115108577
ENSMUSG00000029557.8_0	chr5	-	1443	3	FSM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140317653	140313428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140314536_140316734_140317025_140317607
ENSMUSG00000029557.8_1	chr5	-	1381	2	ISM	ENSMUSG00000029557.8	ENSMUST00000031536.8	1443	3	645	0	645	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTACTTGTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140317008	140313428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_140314536_140316734
ENSMUSG00000029559.16_0	chr5	+	2585	6	FSM	ENSMUSG00000029559.16	ENSMUST00000031538.9	2607	6	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAACAGCAGGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	115080229	115087833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115080415_115083844_115083888_115084076_115084176_115084349_115084424_115085221_115085313_115085740
ENSMUSG00000029560.13_0	chr5	-	2620	11	FSM	ENSMUSG00000029560.13	ENSMUST00000031539.12	2627	11	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGGTTTCCACGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140375011	140326058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946_140346138_140374902
ENSMUSG00000029560.13_1	chr5	-	2514	10	FSM	ENSMUSG00000029560.13	ENSMUST00000196130.5	2547	10	30	3	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGATGGTTTCCACGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	140346140	140326058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140327398_140330040_140330191_140330463_140330611_140332031_140332101_140337887_140338021_140338789_140338951_140339187_140339269_140341714_140341837_140343811_140343930_140345946
ENSMUSG00000029561.18_0	chr5	+	3105	6	FSM	ENSMUSG00000029561.18	ENSMUST00000031542.13	3123	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGGCTTTGGATCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	115035006	115050287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115035924_115037802_115038092_115039300_115039477_115042892_115043138_115044723_115044866_115048951
ENSMUSG00000029563.17_1	chr6	+	2604	17	FSM	ENSMUSG00000029563.17	ENST00000393498.6	2613	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTTTACTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	15185516	15438241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_15185817_15196949_15197128_15286679_15286770_15376687_15376826_15377958_15378088_15379651_15379827_15394638_15394853_15396737_15396843_15403815_15403904_15405557_15405642_15409739_15409942_15411024_15411102_15411240_15411343_15413799_15413922_15415033_15415104_15415868_15416033_15437875
ENSMUSG00000029569.10_0	chr6	-	4568	5	FSM	ENSMUSG00000029569.10	ENSMUST00000031554.9	4587	5	13	6	13	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCACATTGTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	13608086	13580691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13602236_13603487_13607828
ENSMUSG00000029569.10_1	chr6	-	3321	4	FSM	ENSMUSG00000029569.10	ENSMUST00000149123.3	3337	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCACATTGTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	13608089	13580691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13583334_13591268_13591544_13594942_13595086_13607828
ENSMUSG00000029570.6_0	chr5	+	1848	8	FSM	ENSMUSG00000029570.6	ENST00000402506.5	1851	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCCAAGGGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	140576180	140601295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140576228_140597578_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029570.6_6	chr5	+	2287	8	FSM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	13	5	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCCAAGGGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	140593087	140601295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140593600_140597604_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029570.6_8	chr5	+	1795	7	ISM	ENSMUSG00000029570.6	ENSMUST00000031555.3	2305	8	4510	5	4510	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCCAAGGGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	140597584	140601295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_140597654_140598045_140598146_140598257_140598412_140598514_140598601_140598910_140599077_140599945_140600032_140600161
ENSMUSG00000029571.15_0	chr6	+	5982	9	FSM	ENSMUSG00000029571.15	ENSMUST00000031556.14	6002	9	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACAAAGTATTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	13069845	13089256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_13069960_13070306_13070414_13071740_13071963_13075034_13075099_13078090_13078251_13081538_13081680_13082411_13082462_13083367_13083422_13084186
ENSMUSG00000029575.18_0	chr5	-	3013	9	FSM	ENSMUSG00000029575.18	ENSMUST00000031560.14	3020	9	5	2	5	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTTGTGGCTCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	114582116	114569096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUSG00000029575.18_1	chr5	-	520	7	FSM	ENSMUSG00000029575.18	ENST00000540016.5	534	7	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAACATGATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	114582034	114571351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114571420_114573338_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114581936
ENSMUSG00000029575.18_3	chr5	-	1270	8	FSM	ENSMUSG00000029575.18	ENSMUST00000123256.3	1277	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCCAGGGAGTCACCAA	NA	NA	NA	NA	NA	NA	NA	NA	114582046	114572688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114573399_114574539_114574605_114574770_114574869_114575110_114575184_114575878_114575937_114576581_114576676_114580821_114580884_114581936
ENSMUSG00000029576.18_0	chr5	-	3663	15	FSM	ENSMUSG00000029576.18	ENSMUST00000063635.15	3700	15	29	8	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTATAGTGGGGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	142536824	142470601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142471004_142471167_142471308_142471609_142471747_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159_142529759_142536734
ENSMUSG00000029576.18_1	chr5	-	3530	14	FSM	ENSMUSG00000029576.18	ENST00000399583.4	3549	14	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTGTATTCTTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	142529739	142470611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142471004_142471167_142471308_142471609_142471733_142472509_142472862_142473201_142473393_142474157_142474309_142479982_142480156_142480490_142480729_142481080_142481194_142483592_142483754_142489667_142489706_142492213_142492844_142493824_142494073_142529159
ENSMUSG00000029577.14_0	chr5	+	5173	28	FSM	ENSMUSG00000029577.14	ENSMUST00000074002.12	5194	28	11	10	11	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACACGACGGCTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	114518678	114559220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114519037_114522375_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ENSMUSG00000029577.14_11	chr5	+	3417	28	FSM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCCTGGTCTCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	114519247	114557728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114519347_114522380_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ENSMUSG00000029577.14_27	chr5	+	3319	27	ISM	ENSMUSG00000029577.14	ENST00000342494.8	3424	28	3138	1	3138	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCCTGGTCTCGCTA	NA	NA	NA	NA	NA	NA	NA	NA	114522379	114557728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_114522464_114525154_114525340_114525441_114525563_114526783_114526844_114527125_114527231_114528450_114528548_114530158_114530245_114531137_114531221_114536468_114536575_114536822_114536944_114537850_114538029_114539328_114539499_114540582_114540751_114542600_114542773_114544232_114544352_114544806_114544922_114545604_114545705_114546157_114546278_114549079_114549257_114549364_114549476_114550226_114550365_114550482_114550549_114550911_114550971_114553262_114553446_114553637_114553750_114556598_114556692_114557538
ENSMUSG00000029578.16_0	chr5	+	5155	12	FSM	ENSMUSG00000029578.16	ENSMUST00000036872.16	5171	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGATTCAAGGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	142615306	142656337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_142615588_142623956_142624040_142641602_142641773_142643946_142644044_142644819_142644918_142645287_142645381_142646779_142646851_142648789_142648898_142650079_142650245_142651177_142651286_142651848_142652007_142652614
ENSMUSG00000029580.15_0	chr5	-	1903	6	FSM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	95541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAACAGCTTGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	142892501	142888878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318_142891448_142892406
ENSMUSG00000029580.15_1	chr5	-	1810	5	ISM	ENSMUSG00000029580.15	ENSMUST00000100497.11	1920	6	1060	9	-6	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAACAGCTTGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	142891449	142888878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_142889697_142889821_142890004_142890098_142890538_142890991_142891232_142891318
ENSMUSG00000029581.15_0	chr5	+	2664	5	FSM	ENSMUSG00000029581.15	ENSMUST00000031565.15	2675	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTGTGTCTCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	142946108	142958940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029581.15_1	chr5	+	2136	6	FSM	ENSMUSG00000029581.15	ENSMUST00000198017.5	2157	6	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTGCGGCCCGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142946144	142958931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_142946403_142946885_142947036_142955659_142955817_142955921_142956044_142956272_142956441_142957650
ENSMUSG00000029587.17_0	chr5	+	4283	4	FSM	ENSMUSG00000029587.17	ENSMUST00000077485.11	4294	4	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGAACTTGAAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	143220918	143233693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143229816
ENSMUSG00000029587.17_1	chr5	+	5254	5	FSM	ENSMUSG00000029587.17	ENSMUST00000032591.15	5265	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTATTTGTTGAAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	143220933	143234583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143221135_143222008_143222072_143225708_143225836_143226074_143226171_143229816
ENSMUSG00000029591.15_0	chr5	+	1963	7	FSM	ENSMUSG00000029591.15	ENSMUST00000031587.13	1985	7	13	9	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGGCGGTGTGCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	114268459	114277375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114268687_114269379_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029591.15_3	chr5	+	2125	6	FSM	ENSMUSG00000029591.15	ENSMUST00000102584.11	2136	6	4	7	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGGCGGTGTGCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	114268990	114277375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114269575_114270241_114270338_114273924_114274023_114274407_114274497_114275213_114275393_114276296
ENSMUSG00000029592.12_0	chr5	+	4582	13	FSM	ENSMUSG00000029592.12	ENSMUST00000031588.12	4604	13	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAATGCTTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	114238390	114262774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114238577_114240443_114240554_114241704_114241888_114243808_114243913_114249177_114249277_114249929_114249976_114250947_114251043_114257099_114257160_114257623_114257711_114258258_114258340_114258453_114258674_114259092_114259214_114259584
ENSMUSG00000029594.13_0	chr5	+	3993	24	FSM	ENSMUSG00000029594.13	ENSMUST00000031590.12	4010	24	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGATGTCACTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	120254545	120337045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120254715_120256724_120256908_120257696_120257817_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271947_120278268_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ENSMUSG00000029594.13_2	chr5	+	2830	23	FSM	ENSMUSG00000029594.13	ENST00000392561.7	2841	23	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCAGGGTGCATGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	120256732	120336050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120256908_120257696_120257821_120257959_120257996_120258161_120258367_120260957_120261215_120262215_120262297_120262758_120262838_120264238_120264311_120265029_120265231_120266248_120266380_120268774_120268894_120269218_120269316_120270198_120270310_120270906_120271108_120271825_120271958_120278274_120278439_120278601_120278663_120279615_120279696_120281441_120281498_120282061_120282179_120313923_120314030_120324282_120324404_120335946
ENSMUSG00000029596.14_0	chr5	-	1468	9	FSM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGAGCGTGTGGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	120610873	120596272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338_120605564_120610790
ENSMUSG00000029596.14_1	chr5	-	1383	8	ISM	ENSMUSG00000029596.14	ENSMUST00000031594.13	1476	9	5310	10	5263	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTGAGCGTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120605565	120596276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_120596617_120597509_120597635_120597820_120598049_120598671_120598761_120600041_120600182_120600910_120600951_120601096_120601291_120605338
ENSMUSG00000029598.13_0	chr5	-	4192	12	FSM	ENSMUSG00000029598.13	ENSMUST00000031597.7	4208	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTTGTGAGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	120641681	120621353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120623904_120624104_120624268_120624712_120624866_120625494_120625567_120625736_120625833_120626474_120626636_120629190_120629289_120630729_120630945_120631116_120631218_120632442_120632602_120637061_120637156_120641351
ENSMUSG00000029599.14_0	chr5	+	4311	20	FSM	ENSMUSG00000029599.14	ENSMUST00000031598.11	4322	20	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCAAGGTATTCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120750812	120766655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120751372_120755023_120755154_120756204_120756276_120756664_120756854_120756940_120756991_120757669_120757712_120757828_120757925_120758322_120758445_120758536_120758599_120758691_120758824_120759679_120759891_120761245_120761381_120761636_120761874_120761956_120762031_120762602_120762795_120763766_120763910_120763990_120764105_120764465_120764571_120764898_120765015_120765124
ENSMUSG00000029600.11_0	chr5	-	1547	3	FSM	ENSMUSG00000029600.11	ENSMUST00000031599.9	1573	3	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTAAAATCGGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120750638	120747132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120748028_120749442_120749795_120750338
ENSMUSG00000029600.11_1	chr5	-	1654	4	FSM	ENSMUSG00000029600.11	ENSMUST00000177800.8	1668	4	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTAAAATCGGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120750650	120747132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120748028_120749442_120749795_120750044_120750140_120750338
ENSMUSG00000029602.12_0	chr5	+	2243	19	FSM	ENSMUSG00000029602.12	ENST00000261729.9	2257	19	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGGGGATAGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	120792879	120817079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813454_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029602.12_1	chr5	+	2163	19	FSM	ENSMUSG00000029602.12	ENST00000446861.7	2173	19	8	2	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACGGGGATAGGAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	120792875	120817079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120792985_120793132_120793195_120797567_120797698_120800075_120800158_120800248_120800381_120800983_120801070_120801790_120801909_120802035_120802190_120802510_120802576_120802810_120802924_120804307_120804501_120808340_120808479_120809605_120809751_120812631_120812805_120813538_120813593_120813670_120813807_120814852_120814974_120816687_120816747_120816986
ENSMUSG00000029605.17_0	chr5	+	1833	6	FSM	ENSMUSG00000029605.17	ENSMUST00000183291.2	1837	6	-3	7	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATTTGCCTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	120950699	120962221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120950946_120952490_120952768_120955677_120955863_120959258_120959492_120960171_120960326_120961483
ENSMUSG00000029610.14_0	chr5	-	1168	4	FSM	ENSMUSG00000029610.14	ENSMUST00000031613.11	1185	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCTATGGAGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	143846648	143839529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846398
ENSMUSG00000029610.14_1	chr5	-	1058	4	FSM	ENSMUSG00000029610.14	ENSMUST00000100483.3	1073	4	6	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATCTATGGAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	143846659	143839530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143840009_143841382_143841615_143843366_143843574_143846518
ENSMUSG00000029610.14_2	chr5	-	745	3	FSM	ENSMUSG00000029610.14	ENST00000395236.2	761	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAATTCGAGCAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143846528	143839625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143840009_143841382_143841615_143846398
ENSMUSG00000029613.16_0	chr5	+	4307	15	FSM	ENSMUSG00000029613.16	ENSMUST00000100487.6	4325	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTCAAACAGAAAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	143803551	143841060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143803764_143808680_143808840_143810568_143810703_143812477_143812516_143814393_143814494_143816252_143816334_143818970_143819071_143820790_143820849_143821473_143821799_143823667_143823780_143826213_143826315_143833982_143834095_143834292_143834376_143835831_143836066_143838602
ENSMUSG00000029614.14_0	chr5	+	1259	7	FSM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	21629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGATTTTTTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	121342546	121347296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121342616_121343468_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029614.14_12	chr5	+	1189	6	ISM	ENSMUSG00000029614.14	ENSMUST00000031617.13	1270	7	926	8	926	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGATTTTTTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	121343469	121347296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_121343727_121343816_121343919_121344729_121344874_121345209_121345259_121346453_121346639_121346844
ENSMUSG00000029616.10_0	chr5	-	5187	3	FSM	ENSMUSG00000029616.10	ENSMUST00000130451.2	5204	3	10	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATATTTATGCATATGT	NA	NA	NA	NA	NA	NA	NA	NA	121590559	121578893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121583636_121585203_121585343_121590253
ENSMUSG00000029616.10_1	chr5	-	1112	2	FSM	ENSMUSG00000029616.10	ENSMUST00000052590.8	1123	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTTTTCTTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121590548	121582818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121583636_121590253
ENSMUSG00000029617.11_0	chr5	-	1703	13	FSM	ENSMUSG00000029617.11	ENST00000626257.2	1726	13	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143951708	143924733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929477_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949811_143949910_143951516
ENSMUSG00000029617.11_7	chr5	-	1748	15	FSM	ENSMUSG00000029617.11	ENSMUST00000031621.11	1769	15	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATACTGGTTTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	143951657	143924733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143925068_143927455_143927584_143928289_143928449_143929326_143929445_143930043_143930078_143934980_143935093_143935361_143935424_143938194_143938277_143940860_143941037_143946020_143946105_143947848_143947897_143948269_143948348_143949620_143949715_143949811_143949910_143951516
ENSMUSG00000029621.15_0	chr5	+	1617	10	FSM	ENSMUSG00000029621.15	ENSMUST00000031625.15	1632	10	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGTTTTTTCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	145020650	145045567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145020783_145027962_145028057_145029267_145029373_145032861_145033085_145034025_145034134_145037866_145038080_145041251_145041328_145041507_145041702_145043854_145043946_145045186
ENSMUSG00000029622.17_0	chr5	+	3088	10	FSM	ENSMUSG00000029622.17	ENSMUST00000085679.13	3105	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAGGAGCATGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	145051034	145066502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145051152_145058466_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029622.17_18	chr5	+	1358	10	FSM	ENSMUSG00000029622.17	ENST00000455009.6	1366	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGCAGTACACTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	145051095	145064762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145051188_145058431_145058550_145059341_145059447_145060378_145060602_145061396_145061505_145062387_145062595_145062700_145062777_145063536_145063743_145064445_145064537_145064630
ENSMUSG00000029623.15_0	chr5	-	2338	6	FSM	ENSMUSG00000029623.15	ENSMUST00000031627.9	2353	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTATGGCTTGATGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	145077038	145065583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145067186_145068174_145068327_145069668_145069791_145071874_145071983_145073711_145073804_145076776
ENSMUSG00000029624.11_0	chr5	-	3069	9	FSM	ENSMUSG00000029624.11	ENSMUST00000031628.10	3087	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAACTGAGTGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	145103908	145084331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145085316_145088095_145088279_145088927_145089045_145091483_145092189_145095549_145095652_145096284_145096504_145097848_145097990_145101870_145102344_145103763
ENSMUSG00000029625.17_0	chr5	+	1698	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160629.8	1713	8	14	1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	145104036	145118850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUSG00000029625.17_2	chr5	+	1600	7	FSM	ENSMUSG00000029625.17	ENSMUST00000070487.12	1606	7	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	145104038	145118850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112920_145113015_145114039_145114113_145115645_145115739_145117945
ENSMUSG00000029625.17_3	chr5	+	1749	8	FSM	ENSMUSG00000029625.17	ENSMUST00000160422.8	1756	8	7	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTTTCATTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	145104063	145118850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145104270_145107324_145107376_145110116_145110270_145112366_145112463_145112920_145113015_145114039_145114113_145115567_145115739_145117945
ENSMUSG00000029627.13_0	chr5	-	1945	3	FSM	ENSMUSG00000029627.13	ENSMUST00000031632.9	1967	3	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTCAGTTGTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	145138659	145131758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145133010_145135486_145135611_145138089
ENSMUSG00000029627.13_1	chr5	-	1352	2	FSM	ENSMUSG00000029627.13	ENST00000426306.2	1376	2	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAAATTCAGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	145138417	145131985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145133010_145138089
ENSMUSG00000029629.18_0	chr6	+	3970	16	FSM	ENSMUSG00000029629.18	ENSMUST00000090632.11	3985	16	5	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAGAATATAACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11925918	12008070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983
ENSMUSG00000029629.18_2	chr6	+	3323	18	FSM	ENSMUSG00000029629.18	ENSMUST00000115511.9	3336	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAAATTCATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	11925925	12081202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_11926292_11926725_11926837_11933251_11934019_11941428_11941574_11953286_11953447_11961548_11961661_11962650_11962789_11986340_11986488_11987002_11987274_11987574_11987682_11988720_11988817_11990027_11990132_11991984_11992117_11997024_11997194_12006809_12006861_12006983_12007106_12047825_12047944_12080995
ENSMUSG00000029632.8_0	chr6	-	592	4	FSM	ENSMUSG00000029632.8	ENSMUST00000204978.3	610	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAAGAATCTCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	11907472	11900298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_11900591_11905200_11905262_11906018_11906108_11907322
ENSMUSG00000029634.16_0	chr5	-	3434	5	FSM	ENSMUSG00000029634.16	ENSMUST00000161859.8	3452	5	7	11	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTAAAGACTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	146158358	146146012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146158029
ENSMUSG00000029634.16_1	chr5	-	3256	5	FSM	ENSMUSG00000029634.16	ENSMUST00000169407.9	3276	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAACACTAAAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	146157701	146146015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157547
ENSMUSG00000029634.16_4	chr5	-	2343	4	ISM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	494	6	419	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACCAAATAACCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	146157292	146146772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211
ENSMUSG00000029634.16_5	chr5	-	2382	5	FSM	ENSMUSG00000029634.16	ENSMUST00000067837.10	2388	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACCAAATAACCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	146157786	146146772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146148743_146152906_146153003_146154710_146154907_146157211_146157295_146157749
ENSMUSG00000029635.16_0	chr5	+	2951	13	FSM	ENSMUSG00000029635.16	ENSMUST00000031640.15	2973	13	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCAATGTATGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	146168110	146239675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146168631_146196314_146196391_146205024_146205136_146208404_146208546_146220438_146220497_146222917_146223050_146229433_146229578_146231972_146232043_146233168_146233242_146235612_146235711_146236307_146236387_146236501_146236661_146238385
ENSMUSG00000029638.18_0	chr6	+	6180	8	FSM	ENSMUSG00000029638.18	ENSMUST00000064285.15	6200	8	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACTGGAATAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	8509606	8597535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8510320_8537816_8537969_8558499_8558587_8573184_8573299_8579586_8579740_8582579_8582791_8591544_8591666_8592906
ENSMUSG00000029640.18_0	chr5	-	4316	9	FSM	ENSMUSG00000029640.18	ENSMUST00000085614.6	4327	9	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATACTTTTTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	146731807	146671620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_146674591_146675909_146675989_146677103_146677302_146688504_146688589_146688702_146688780_146691179_146691410_146700010_146700225_146705746_146705828_146731424
ENSMUSG00000029641.9_0	chr5	+	1112	4	FSM	ENSMUSG00000029641.9	ENSMUST00000031646.8	1126	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTATTCCTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	146781888	146784530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146782151_146782469_146782527_146782649_146782730_146783817
ENSMUSG00000029642.12_0	chr5	+	1182	2	FSM	ENSMUSG00000029642.12	ENSMUST00000050970.4	1196	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGTTTTGAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	147013867	147015890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147014504_147015344
ENSMUSG00000029642.12_1	chr5	+	1122	3	FSM	ENSMUSG00000029642.12	ENSMUST00000110557.5	1137	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCGGTGCTTTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	147014162	147048163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147014504_147038038_147038114_147047457
ENSMUSG00000029647.16_0	chr5	+	5029	19	FSM	ENSMUSG00000029647.16	ENSMUST00000031651.15	5048	19	11	8	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTATTTCTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	147366981	147485304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415_147482546_147483174
ENSMUSG00000029647.16_3	chr5	+	5517	19	FSM	ENSMUSG00000029647.16	ENSMUST00000176600.8	5541	19	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAACTTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	147367277	147485297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147367820_147387462_147387585_147390061_147390129_147391927_147391999_147403745_147403908_147424920_147425069_147456314_147456563_147458639_147458745_147459985_147460044_147463328_147463491_147463734_147463852_147463938_147464041_147466764_147466931_147468026_147468118_147473210_147473351_147476052_147476183_147476551_147476617_147479879_147480019_147482415
ENSMUSG00000029648.14_1	chr5	-	919	8	ISM	ENSMUSG00000029648.14	ENST00000451650.1	1007	9	5910	1	5910	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGTCATGATCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	147519517	147505553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_147505637_147507673_147507817_147508260_147508367_147512949_147513050_147515134_147515247_147517111_147517235_147518912_147519004_147519356
ENSMUSG00000029648.14_2	chr5	-	1000	9	FSM	ENSMUSG00000029648.14	ENST00000451650.1	1007	9	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGTCATGATCATAAG	NA	NA	NA	NA	NA	NA	NA	NA	147525421	147505553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_147505637_147507673_147507817_147508260_147508367_147512949_147513050_147515134_147515247_147517111_147517235_147518912_147519004_147519356_147519515_147525337
ENSMUSG00000029649.11_0	chr5	+	1561	6	FSM	ENSMUSG00000029649.11	ENSMUST00000031654.10	1579	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGATACTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	147797281	147813259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147797502_147799362_147799461_147805532_147805594_147806221_147806324_147809375_147809470_147812273
ENSMUSG00000029650.11_0	chr5	-	2425	6	FSM	ENSMUSG00000029650.11	ENSMUST00000031655.4	2434	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGTGGTTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	147831616	147815250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_147816025_147816502_147816660_147821006_147821091_147822780_147823652_147830642_147830856_147831290
ENSMUSG00000029655.18_0	chr5	-	8971	6	FSM	ENSMUSG00000029655.18	ENSMUST00000118316.8	8982	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTGTTTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	150589066	150559436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150566781_150570465_150570543_150570924_150571014_150574079_150574205_150584743_150585979_150588965
ENSMUSG00000029655.18_5	chr5	-	858	2	FSM	ENSMUSG00000029655.18	ENST00000674437.1	872	2	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCATGGATCATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	150574196	150566039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150566781_150574079
ENSMUSG00000029655.18_9	chr5	-	2094	3	FSM	ENSMUSG00000029655.18	ENST00000674327.1	2107	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCATGGATCATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	150585971	150566039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150566781_150574079_150574205_150584743
ENSMUSG00000029657.16_0	chr5	-	3788	18	FSM	ENSMUSG00000029657.16	ENSMUST00000202361.4	3802	18	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGAGTTCTTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	149559790	149540009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029657.16_12	chr5	-	3259	18	FSM	ENSMUSG00000029657.16	ENST00000630972.2	3278	18	11	8	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	149559913	149540315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149546929_149547062_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559780
ENSMUSG00000029657.16_24	chr5	-	3221	17	FSM	ENSMUSG00000029657.16	ENSMUST00000074846.14	3240	17	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTAAGCTGTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	149559661	149540315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_149541176_149541851_149542014_149542210_149542331_149542425_149542534_149543341_149543468_149544010_149544149_149548433_149548643_149550719_149550854_149551000_149551108_149552665_149552895_149553251_149553497_149553803_149553938_149554224_149554325_149554851_149554975_149555498_149555640_149557294_149557353_149559434
ENSMUSG00000029658.18_0	chr5	+	2566	23	FSM	ENSMUSG00000029658.18	ENSMUST00000202902.2	2574	23	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAACAAATCAGATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	149453199	149535353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149453271_149456124_149456172_149468206_149468325_149475883_149475954_149486680_149486711_149487647_149487892_149489827_149489934_149497453_149497606_149502518_149502622_149504080_149504188_149504269_149504350_149505292_149505348_149506551_149506598_149507921_149507982_149511534_149511701_149516559_149516656_149517938_149517998_149518714_149518857_149519780_149519821_149520964_149521054_149522668_149522863_149529753_149529852_149534960
ENSMUSG00000029659.17_0	chr5	+	2935	5	FSM	ENSMUSG00000029659.17	ENSMUST00000093110.12	2953	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTACTAACAGGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	149335222	149355179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149335721_149345598_149345709_149350398_149350512_149350685_149350972_149353251
ENSMUSG00000029661.17_1	chr6	+	5317	51	NIC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	10	-10	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGAGTAAAATTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	4505502	4541534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_4505910_4508939_4508955_4509603_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536262_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ENSMUSG00000029661.17_2	chr6	+	5329	52	FSM	ENSMUSG00000029661.17	ENSMUST00000031668.10	5348	52	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAGTAAAATTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	4505502	4541535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_4505910_4508334_4508346_4508939_4508955_4509603_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536262_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ENSMUSG00000029661.17_6	chr6	+	5308	50	NIC	ENSMUSG00000029661.17	novel	5348	52	NA	NA	1	-13	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTGAGTAAAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	4505493	4541531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_4505910_4509603_4509640_4510683_4510795_4512360_4512415_4515209_4515255_4515480_4515535_4515628_4515683_4515960_4516015_4516391_4516446_4516899_4516954_4518473_4518519_4518790_4518845_4518947_4518993_4519291_4519346_4519829_4519929_4520037_4520083_4520170_4520270_4520595_4520650_4520771_4520880_4521230_4521285_4521395_4521495_4522441_4522496_4522955_4523055_4523593_4523648_4524116_4524171_4524501_4524556_4524875_4524930_4525881_4525927_4527054_4527154_4528305_4528414_4529067_4529122_4530171_4530226_4530956_4531011_4531103_4531158_4531237_4531346_4531894_4531949_4532743_4532798_4533741_4533904_4534580_4534689_4535380_4535489_4535830_4535885_4535975_4536084_4536207_4536262_4536596_4536705_4537172_4537227_4537349_4537458_4537777_4538037_4538625_4538811_4539462_4539706_4540515
ENSMUSG00000029669.15_0	chr6	-	2476	9	FSM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCATGATGGTTTGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	21852505	21771398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010_21852167_21852404
ENSMUSG00000029669.15_2	chr6	-	2376	8	ISM	ENSMUSG00000029669.15	ENSMUST00000031678.10	2490	9	347	5	-80	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCATGATGGTTTGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	21852167	21771398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_21772936_21795576_21795721_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029669.15_3	chr6	-	2147	7	FSM	ENSMUSG00000029669.15	ENSMUST00000120965.8	2157	7	5	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCATGATGGTTTGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	21852082	21771398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_21772936_21799877_21799986_21806237_21806313_21835386_21835523_21836411_21836495_21851008_21851145_21852010
ENSMUSG00000029670.13_0	chr6	+	3780	12	FSM	ENSMUSG00000029670.13	ENSMUST00000031680.10	3800	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCCTACATGAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	21949580	21976028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968883_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUSG00000029670.13_5	chr6	+	2528	12	FSM	ENSMUSG00000029670.13	ENSMUST00000115389.8	2546	12	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCGTGATGTGGCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	21949673	21974902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21949793_21950036_21950109_21952127_21952229_21953761_21953828_21965732_21965830_21967625_21967698_21968916_21969004_21969276_21969435_21969912_21970107_21971105_21971308_21971809_21971849_21973581
ENSMUSG00000029672.17_0	chr6	-	2810	10	FSM	ENSMUSG00000029672.17	ENSMUST00000165576.8	2826	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTGACGTGTAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22356157	22306526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22329577_22329608_22339271_22339377_22343264_22343319_22355993
ENSMUSG00000029672.17_13	chr6	-	641	7	FSM	ENSMUSG00000029672.17	ENST00000312214.5	660	7	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCAAGACTGACGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	22339371	22308461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252
ENSMUSG00000029672.17_7	chr6	-	1790	9	FSM	ENSMUSG00000029672.17	ENST00000359943.8	1813	9	17	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCAGCTGTTGCCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	22356090	22307510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_22308538_22309325_22309453_22318932_22319018_22321327_22321379_22322288_22322348_22328553_22328678_22339252_22339377_22343264_22343319_22355951
ENSMUSG00000029673.20_0	chr5	-	297	2	FSM	ENSMUSG00000029673.20	ENST00000643587.1	309	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGGTGAGCAAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	132353413	132287768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_132287976_132353323
ENSMUSG00000029673.20_1	chr5	-	206	1	NIC	ENSMUSG00000029673.20	novel	7410	19	NA	NA	65441	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAGACAGGTGAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	132287978	132287772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_-_132287800_132288000
ENSMUSG00000029674.14_0	chr5	-	3314	16	FSM	ENSMUSG00000029674.14	ENSMUST00000015137.10	3331	16	16	1	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCGTGTGTGTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	134717436	134684893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134686240_134686346_134686505_134686762_134686819_134688700_134688858_134690646_134690713_134690956_134691017_134693038_134693171_134694060_134694148_134694683_134694868_134697767_134697935_134698043_134698150_134699171_134699379_134701524_134701635_134701865_134702005_134715497_134715595_134717194
ENSMUSG00000029676.16_11	chr6	-	1332	9	FSM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGTAAGAGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25794652	25753154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558
ENSMUSG00000029676.16_12	chr6	-	1239	8	ISM	ENSMUSG00000029676.16	ENST00000654766.1	1345	9	15689	7	15689	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGTAAGAGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25778969	25753154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_25753354_25756161_25756319_25757223_25757269_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837
ENSMUSG00000029676.16_2	chr6	-	3147	18	FSM	ENSMUSG00000029676.16	ENSMUST00000115330.8	3151	18	4	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACATCTTCCAGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	25809221	25743735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_25744693_25745889_25745996_25748289_25748382_25750048_25750138_25752358_25752495_25753147_25753354_25756161_25756319_25757223_25757287_25758816_25758903_25764250_25764424_25771517_25771674_25775523_25775815_25778837_25778969_25794558_25794674_25798007_25798055_25800282_25800510_25805873_25805941_25809173
ENSMUSG00000029680.3_0	chr6	+	1573	4	FSM	ENSMUSG00000029680.3	ENST00000223026.9	1584	4	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAATCGCATCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24748325	24766106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_24748392_24755735_24756738_24763794_24763885_24765691
ENSMUSG00000029680.3_2	chr6	+	1506	3	ISM	ENSMUSG00000029680.3	ENST00000223026.9	1584	4	7413	9	7409	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGGAATCGCATCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24755736	24766106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_24756738_24763794_24763885_24765691
ENSMUSG00000029681.13_0	chr5	+	1740	6	FSM	ENSMUSG00000029681.13	ENSMUST00000031692.12	1758	6	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGACAGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	135197150	135210705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135197453_135199940_135200017_135205982_135206080_135208803_135208975_135209369_135209450_135209691
ENSMUSG00000029681.13_2	chr5	+	534	3	FSM	ENSMUSG00000029681.13	ENSMUST00000111187.10	564	3	13	17	-10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTGGAAAACAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	135197255	135202285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135197453_135199940_135200017_135202024
ENSMUSG00000029683.8_0	chr6	+	1972	3	FSM	ENSMUSG00000029683.8	ENSMUST00000031694.8	1976	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTCATATGGGCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	24597764	24605413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_24598155_24603299_24604653_24605184
ENSMUSG00000029684.15_0	chr6	-	4332	11	FSM	ENSMUSG00000029684.15	ENSMUST00000031695.15	4352	11	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGTATAAAATAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24665001	24613816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_24616346_24618271_24618381_24619183_24619702_24624234_24624389_24625052_24625096_24626692_24626862_24629923_24629948_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ENSMUSG00000029684.15_5	chr6	-	1244	5	FSM	ENSMUSG00000029684.15	ENSMUST00000041737.8	1298	5	49	5	49	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACTCTTTGAATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	24664938	24632688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_24633210_24633835_24633933_24634570_24634658_24637647_24637783_24664534
ENSMUSG00000029686.16_0	chr6	+	2976	22	FSM	ENSMUSG00000029686.16	ENST00000663044.1	2999	22	6	17	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGAAAATTAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	47431035	47502975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47431113_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_11	chr6	+	2993	22	FSM	ENSMUSG00000029686.16	ENST00000602748.5	3021	22	11	17	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATTAAAGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	47431072	47502976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47431166_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_30	chr6	+	3149	22	FSM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	10	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTATATTCCCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47431263	47503071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_42	chr6	+	2970	21	FSM	ENSMUSG00000029686.16	ENST00000663835.1	2997	21	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGTAAATAAAAGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	47431280	47503041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_58	chr6	+	3018	21	FSM	ENSMUSG00000029686.16	ENST00000662132.1	3037	21	6	13	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAATAAAAGATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	47431315	47503043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47431418_47461677_47461979_47472000_47472176_47474154_47474323_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_74	chr6	+	2900	21	ISM	ENSMUSG00000029686.16	ENSMUST00000031697.9	3161	22	30423	98	0	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGAAAATTAAAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	47461676	47502975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_79	chr6	+	2548	19	FSM	ENSMUSG00000029686.16	ENST00000660240.1	2567	19	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAACCATTTGTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	47461688	47502929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47496581_47496714_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029686.16_84	chr6	+	2755	20	FSM	ENSMUSG00000029686.16	ENST00000666124.1	2774	20	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	47461686	47502972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47461979_47472000_47472176_47474154_47474323_47478101_47478153_47478632_47478724_47479360_47479525_47485159_47485323_47485906_47486038_47491728_47491837_47491912_47492020_47493408_47493458_47494035_47494168_47495098_47495217_47496069_47496147_47497726_47497820_47500011_47500060_47500137_47500221_47500632_47500739_47501450_47501565_47502487
ENSMUSG00000029687.17_0	chr6	-	2771	20	FSM	ENSMUSG00000029687.17	ENSMUST00000081721.13	2787	20	13	3	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTGTTAGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	47571951	47507075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUSG00000029687.17_20	chr6	-	2639	20	FSM	ENSMUSG00000029687.17	ENST00000320356.7	2658	20	12	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGTTGTTGAATCACTT	NA	NA	NA	NA	NA	NA	NA	NA	47571950	47507221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553469_47553599_47554477_47554602_47571827
ENSMUSG00000029687.17_49	chr6	-	2459	20	FSM	ENSMUSG00000029687.17	ENST00000483967.5	2473	20	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTAACAGTAATTTATAG	NA	NA	NA	NA	NA	NA	NA	NA	47571950	47507359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528665_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUSG00000029687.17_7	chr6	-	2764	20	FSM	ENSMUSG00000029687.17	ENSMUST00000114618.8	2775	20	8	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAGTGTTAGTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	47571956	47507075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_47507536_47508674_47508760_47508918_47509000_47509835_47509918_47510675_47510772_47517610_47517790_47518778_47518905_47519299_47519341_47520879_47520975_47521373_47521544_47522609_47522851_47524278_47524371_47528650_47528830_47529319_47529423_47531057_47531199_47532963_47533085_47535111_47535229_47553496_47553599_47554477_47554602_47571827
ENSMUSG00000029699.14_0	chr5	-	1164	3	FSM	ENSMUSG00000029699.14	ENSMUST00000054895.4	1191	3	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTTTAACTGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	135991154	135989077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135990063_135990742_135990821_135991053
ENSMUSG00000029701.16_0	chr6	-	4449	19	FSM	ENSMUSG00000029701.16	ENSMUST00000007993.16	4465	19	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTGCTTCTTGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	29164989	29123574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29125524_29127796_29127900_29128427_29128685_29131265_29131341_29131625_29131776_29135406_29135566_29137577_29137643_29138501_29138638_29139551_29139626_29143552_29143663_29152280_29152354_29154752_29154893_29155025_29155189_29157066_29157139_29158168_29158262_29158845_29158922_29159654_29159750_29160035_29160195_29164489
ENSMUSG00000029703.11_0	chr5	-	2456	15	FSM	ENSMUSG00000029703.11	ENSMUST00000006301.11	2473	15	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCAATTCCTTCTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	136164915	136151629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136152170_136152256_136152367_136152453_136152610_136152720_136152813_136159074_136159216_136159316_136159390_136159827_136160036_136160306_136160417_136160965_136161081_136161159_136161283_136161828_136161934_136162158_136162300_136162787_136162905_136163352_136163588_136164725
ENSMUSG00000029705.18_12	chr5	-	2249	22	FSM	ENSMUSG00000029705.18	ENST00000393824.7	2255	22	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCTGTGATACATA	NA	NA	NA	NA	NA	NA	NA	NA	136596115	136277456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136596031
ENSMUSG00000029705.18_44	chr5	-	7661	22	FSM	ENSMUSG00000029705.18	ENST00000646649.1	7676	22	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACCTGGCTCCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	136596158	136300160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136341496_136341863_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136596031
ENSMUSG00000029705.18_56	chr5	-	4043	21	ISM	ENSMUSG00000029705.18	ENST00000556210.1	4080	22	79564	1	79564	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGCCGGGCCTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	136514699	136303645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136341496_136341863_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594
ENSMUSG00000029705.18_57	chr5	-	4079	22	FSM	ENSMUSG00000029705.18	ENST00000556210.1	4080	22	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGCCGGGCCTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	136594263	136303645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136341496_136341863_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136594233
ENSMUSG00000029705.18_58	chr5	-	4384	22	FSM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGCGCCGGGCCTCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	136594263	136303646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594_136514706_136594233
ENSMUSG00000029705.18_59	chr5	-	4350	21	ISM	ENSMUSG00000029705.18	ENST00000550008.6	4386	22	79563	1	79563	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGCCGGGCCTCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	136514700	136303645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_136304321_136308283_136308549_136311721_136311911_136315614_136315918_136333576_136333634_136334302_136334469_136336612_136337449_136341496_136342169_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355793_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833_136436882_136514594
ENSMUSG00000029705.18_9	chr5	-	2168	21	ISM	ENSMUSG00000029705.18	ENST00000393824.7	2255	22	159233	4	157379	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTTTCTGTGATACATA	NA	NA	NA	NA	NA	NA	NA	NA	136436884	136277456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_136277835_136278021_136278087_136279377_136279459_136280224_136280282_136281396_136281481_136282920_136283038_136285085_136285199_136285653_136285721_136286766_136286895_136343160_136343258_136344852_136344902_136348634_136348694_136355603_136355787_136361477_136361583_136368942_136368992_136388855_136388923_136392112_136392190_136398971_136399096_136402175_136402314_136421168_136421248_136436833
ENSMUSG00000029708.10_0	chr6	-	4621	2	FSM	ENSMUSG00000029708.10	ENSMUST00000090511.4	4650	2	17	12	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCCAACTTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	28421706	28416101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_28419300_28420283
ENSMUSG00000029710.16_0	chr5	+	4314	17	FSM	ENSMUSG00000029710.16	ENSMUST00000061244.15	4340	17	18	8	-17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGAGGGTGACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137348388	137372782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360651_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUSG00000029710.16_4	chr5	+	3673	14	FSM	ENSMUSG00000029710.16	ENST00000616502.4	3695	14	15	7	-13	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGTGACTGGGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	137348420	137372787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUSG00000029710.16_8	chr5	+	4293	17	FSM	ENSMUSG00000029710.16	ENSMUST00000111055.9	4296	17	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGAGGGTGACTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	137348436	137372782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137348912_137352350_137352422_137352541_137352830_137355803_137356201_137358626_137358783_137359395_137359729_137360624_137360777_137361420_137361587_137363209_137363313_137363714_137363780_137363885_137364000_137364802_137365051_137367974_137368191_137368972_137369123_137370285_137370480_137370646_137370803_137371773
ENSMUSG00000029713.16_0	chr5	-	1845	10	FSM	ENSMUSG00000029713.16	ENSMUST00000031726.15	1860	10	8	7	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTACCTAGTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	137531764	137526395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137528445_137528553_137528659_137528699_137528956_137529103_137531400
ENSMUSG00000029713.16_2	chr5	-	1265	7	FSM	ENSMUSG00000029713.16	ENSMUST00000143495.8	1285	7	15	5	-12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTACCTAGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	137531478	137526397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137526872_137526952_137527170_137527265_137527468_137527704_137527772_137527864_137528028_137528107_137528172_137531400
ENSMUSG00000029714.12_0	chr5	+	5430	24	FSM	ENSMUSG00000029714.12	ENSMUST00000031727.10	5440	24	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACCTTGTCTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137517143	137526191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137517249_137517344_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ENSMUSG00000029714.12_2	chr5	+	5326	23	ISM	ENSMUSG00000029714.12	ENSMUST00000031727.10	5440	24	204	6	204	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTACCTTGTCTGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	137517343	137526191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_137517475_137517571_137517668_137517767_137517880_137517998_137518108_137518289_137518331_137518473_137518639_137518808_137519063_137519146_137519265_137520109_137520245_137520384_137520486_137520639_137520812_137520922_137521090_137521216_137521318_137521398_137521519_137521663_137521765_137522060_137522144_137522223_137522371_137522450_137522676_137522912_137523104_137523192_137523354_137523433_137523622_137523691_137523822_137523913
ENSMUSG00000029715.6_0	chr5	-	971	1	FSM	ENSMUSG00000029715.6	ENSMUST00000111035.2	988	1	17	0	17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGCTTCGAATGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	137500670	137499699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137499700_137500700
ENSMUSG00000029715.6_1	chr5	-	873	2	FSM	ENSMUSG00000029715.6	ENSMUST00000031728.5	881	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTCGAATGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137500772	137499700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137500342_137500540
ENSMUSG00000029716.14_0	chr5	+	3020	19	FSM	ENSMUSG00000029716.14	ENSMUST00000198866.5	3072	19	46	6	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGCAATTTAGCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	137568147	137585735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137568381_137569249_137569304_137569538_137569786_137569875_137570054_137572648_137572790_137572869_137572982_137573075_137573199_137575719_137575837_137575927_137576068_137577140_137577305_137578428_137578549_137580850_137580934_137581019_137581084_137581180_137581249_137581335_137581413_137581492_137581578_137581666_137581895_137582187_137582329_137585090
ENSMUSG00000029718.15_0	chr5	-	1609	9	FSM	ENSMUSG00000029718.15	ENSMUST00000031731.14	1626	9	10	7	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	19993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGGATCGTGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	137609739	137603371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137603580_137603718_137603890_137603984_137604063_137605088_137605370_137605669_137605807_137606216_137606342_137607152_137607412_137608658_137608768_137609498
ENSMUSG00000029720.10_0	chr5	+	3058	18	FSM	ENSMUSG00000093445.8	ENSMUST00000031734.16	3078	18	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGGTCCTCAGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	137627395	137639349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209
ENSMUSG00000029720.10_5	chr5	+	4440	22	FSM	ENSMUSG00000029720.10	ENSMUST00000177545.2	4464	22	21	3	21	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGCTGTCTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	137627457	137641158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137627689_137631833_137631979_137632110_137632238_137632405_137632512_137635000_137635138_137635246_137635360_137635474_137635575_137635806_137635898_137635987_137636065_137636166_137636229_137636327_137636445_137636554_137636624_137636700_137636805_137636916_137637001_137637383_137637461_137637611_137637750_137637839_137637918_137638209_137640079_137640171_137640276_137640357_137640497_137640602_137640701_137640784
ENSMUSG00000029722.16_0	chr5	-	2856	12	FSM	ENSMUSG00000029722.16	ENSMUST00000031736.16	2893	12	9	28	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGGATTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	137682979	137648752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137650085_137650691_137650778_137652024_137652154_137653400_137653482_137653591_137653675_137653869_137653991_137659625_137659755_137661697_137661867_137662477_137662635_137665322_137665439_137665942_137666037_137682620
ENSMUSG00000029723.17_0	chr5	+	2703	6	FSM	ENSMUSG00000029723.17	ENSMUST00000100540.10	2730	6	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTCTGAGTAGATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	137744008	137766702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137760637_137760971_137766222
ENSMUSG00000029723.17_1	chr5	+	3978	5	FSM	ENSMUSG00000029723.17	ENSMUST00000100539.10	3983	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGAGCCATCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	137744262	137759670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137744677_137745109_137746122_137749469_137749631_137756945_137756995_137757328
ENSMUSG00000029725.11_0	chr5	+	941	4	FSM	ENSMUSG00000029725.11	ENSMUST00000031739.6	956	4	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCGAACTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	137777177	137778369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137777484_137777563_137777808_137777887_137778025_137778115
ENSMUSG00000029726.17_0	chr5	-	3124	4	FSM	ENSMUSG00000029726.17	ENSMUST00000031740.16	3128	4	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCAGCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	137784922	137780168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137780747_137780856_137780984_137781391_137781611_137782722
ENSMUSG00000029727.8_0	chr5	-	2945	13	FSM	ENSMUSG00000029727.8	ENSMUST00000031741.8	2956	13	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATAGTGGAGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	137919877	137891200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137892627_137893444_137893608_137897059_137897287_137898510_137898672_137903791_137903859_137905695_137905824_137908177_137908327_137909800_137909890_137910100_137910215_137913835_137913936_137915779_137915833_137917260_137917355_137919703
ENSMUSG00000029729.13_0	chr5	+	8242	6	FSM	ENSMUSG00000029729.13	ENSMUST00000019660.11	8261	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAATTTGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	138083356	138106076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138095328_138095421_138095714_138095842_138098851
ENSMUSG00000029729.13_2	chr5	+	7998	4	FSM	ENSMUSG00000029729.13	ENSMUST00000066617.12	8042	4	36	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAATTTGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	138083381	138106076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138083494_138091181_138091695_138092253_138092402_138098851
ENSMUSG00000029729.13_3	chr5	+	4836	3	FSM	ENSMUSG00000029729.13	ENSMUST00000110962.2	4843	3	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATGCACTCATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	138090908	138102753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138091695_138092253_138092402_138098851
ENSMUSG00000029730.17_0	chr5	-	2944	15	FSM	ENSMUSG00000029730.17	ENSMUST00000000505.16	2962	15	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAACTCTGTAGAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	138170672	138162850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167541_138167610_138167736_138167821_138167987_138168578_138168659_138169987
ENSMUSG00000029730.17_11	chr5	-	2829	14	FSM	ENSMUSG00000029730.17	ENST00000354230.7	2841	14	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTGCCTCTTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	138169499	138162871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138163183_138163313_138163424_138164171_138164341_138164944_138165029_138165307_138165702_138165812_138165897_138166102_138166235_138166319_138166435_138166594_138166745_138167071_138167210_138167359_138167736_138167821_138167987_138168578_138168659_138168978
ENSMUSG00000029735.18_0	chr6	-	2639	9	FSM	ENSMUSG00000029735.18	ENSMUST00000067888.14	2671	9	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAGATAGCAATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43643186	43321940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_43323835_43400554_43400667_43445935_43446083_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693_43642752_43643069
ENSMUSG00000029735.18_2	chr6	-	814	5	FSM	ENSMUSG00000029735.18	ENST00000538212.6	821	5	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTCCTAACATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43500889	43323211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817
ENSMUSG00000029735.18_3	chr6	-	741	4	ISM	ENSMUSG00000029735.18	ENST00000538212.6	821	5	34989	4	34989	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTCCTAACATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43465903	43323211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808
ENSMUSG00000029735.18_5	chr6	-	945	7	ISM	ENSMUSG00000029735.18	ENST00000378099.7	1009	8	54434	4	54434	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTCCTAACATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43588307	43323211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247
ENSMUSG00000029735.18_6	chr6	-	1005	8	FSM	ENSMUSG00000029735.18	ENST00000378099.7	1009	8	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGCTCCTAACATCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	43642741	43323211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_43323498_43323586_43323835_43400554_43400667_43465808_43465905_43500817_43500891_43536876_43536947_43588247_43588320_43642693
ENSMUSG00000029736.16_0	chr6	-	818	4	FSM	ENSMUSG00000029736.16	ENST00000645489.1	832	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGGGTGAGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43283744	43281807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_43282104_43282437_43282733_43283212_43283344_43283648
ENSMUSG00000029752.13_0	chr6	-	1978	12	FSM	ENSMUSG00000029752.13	ENSMUST00000031766.12	2001	12	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCTGAAATGCCTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7693241	7675178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685407_7689251_7689524_7693108
ENSMUSG00000029752.13_33	chr6	-	1678	11	FSM	ENSMUSG00000029752.13	ENST00000444334.5	1679	11	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCTGAAGGTCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	7689450	7675275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_7675525_7675992_7676149_7676234_7676317_7677230_7677332_7677939_7678047_7680084_7680212_7681249_7681378_7681933_7682036_7682270_7682457_7685168_7685401_7689242
ENSMUSG00000029752.13_35	chr6	-	1057	6	FSM	ENSMUSG00000029752.13	ENST00000641079.1	1068	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTCTGAAGGTCGAGACA	NA	NA	NA	NA	NA	NA	NA	NA	7689487	7675275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_7675525_7675992_7676149_7681249_7681378_7681933_7682036_7682270_7682457_7689251
ENSMUSG00000029752.13_54	chr6	-	466	2	FSM	ENSMUSG00000029752.13	ENST00000623201.1	489	2	12	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGCTAAAGGTAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	7689487	7685179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_7685401_7689242
ENSMUSG00000029757.17_0	chr6	+	2507	16	FSM	ENSMUSG00000029757.17	ENSMUST00000115554.4	2518	16	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGAGGACTCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	5725820	6028037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_5725937_5757377_5757495_5767029_5767145_5769700_5769792_5800774_5800891_5905104_5905195_5913315_5913479_5915829_5915930_5923164_5923291_5961840_5961988_5966702_5966817_5969373_5969508_5972064_5972210_6006269_6006411_6010454_6010581_6027371
ENSMUSG00000029759.10_0	chr6	-	1819	9	FSM	ENSMUSG00000029759.10	ENSMUST00000031773.9	1837	9	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAATAAATCCAAAATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5256278	5220861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_5221723_5230400_5230530_5230748_5230831_5232323_5232525_5236871_5236999_5240812_5240979_5246277_5246334_5254515_5254587_5256152
ENSMUSG00000029759.10_4	chr6	-	703	5	FSM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTTCTAAAACGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5246329	5221565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_5221723_5232323_5232525_5236871_5236999_5240812_5240979_5246277
ENSMUSG00000029759.10_5	chr6	-	641	4	ISM	ENSMUSG00000029759.10	ENST00000427422.5	706	5	5358	6	5358	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGATCTTTCTAAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	5240971	5221568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_5221723_5232323_5232525_5236871_5236999_5240812
ENSMUSG00000029761.17_0	chr6	+	4106	14	FSM	ENSMUSG00000029761.17	ENSMUST00000079391.10	4127	14	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCACAATAAATGGAATTC	NA	NA	NA	NA	NA	NA	NA	NA	34575443	34752377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34575601_34639062_34639152_34662897_34663010_34718723_34718871_34722553_34722951_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_18	chr6	+	4024	12	FSM	ENSMUSG00000029761.17	ENSMUST00000115021.8	4041	12	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	34686386	34752401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34686633_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_4	chr6	+	4772	15	FSM	ENSMUSG00000029761.17	ENSMUST00000115027.8	4777	15	5	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	34575503	34752401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34575601_34639062_34639152_34662897_34663010_34718723_34718871_34722553_34723575_34724826_34724905_34730377_34730524_34732574_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029761.17_5	chr6	+	4074	14	FSM	ENSMUSG00000029761.17	ENSMUST00000115026.8	4080	14	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCTCTGTCTCGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	34575505	34752401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34575601_34639062_34639152_34662897_34663010_34718723_34718871_34722553_34722951_34730377_34730524_34732568_34732834_34734918_34735060_34739044_34739089_34739185_34739265_34741890_34742029_34743037_34743134_34747982_34748064_34750157
ENSMUSG00000029762.7_0	chr6	+	1339	10	FSM	ENSMUSG00000029762.7	ENSMUST00000038406.7	1358	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAACACGTTCTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34331063	34345389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34331232_34333190_34333359_34334395_34334513_34335065_34335144_34340266_34340390_34340656_34340764_34341171_34341254_34342141_34342226_34342837_34342921_34345060
ENSMUSG00000029763.18_0	chr6	+	4804	18	FSM	ENSMUSG00000029763.18	ENSMUST00000052266.15	4824	18	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTAAATATCGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	33226030	33950905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33556916_33557014_33734901_33735122_33792608_33792746_33815909_33816066_33838995_33839175_33887422_33887565_33895335_33895515_33898312_33898473_33948848
ENSMUSG00000029763.18_8	chr6	+	2588	10	FSM	ENSMUSG00000029763.18	ENSMUST00000090381.11	2598	10	2	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAATTTTCTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	33226064	33454076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_33226174_33242874_33243065_33254121_33254317_33273667_33273853_33282219_33282330_33309145_33309390_33324717_33324893_33415314_33415461_33418885_33418975_33452931
ENSMUSG00000029767.17_0	chr6	+	3047	6	FSM	ENSMUSG00000029767.17	ENST00000535011.6	3064	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCATCAAGGGCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	29348076	29376660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29348212_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUSG00000029767.17_11	chr6	+	3120	6	ISM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	8363	8	8350	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29356467	29376666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029767.17_2	chr6	+	3040	6	FSM	ENSMUSG00000029767.17	ENSMUST00000172974.8	3063	6	14	9	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATCAAGGGCTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	29348081	29376662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29374397
ENSMUSG00000029767.17_7	chr6	+	3213	7	FSM	ENSMUSG00000029767.17	ENSMUST00000031779.17	3229	7	8	8	-5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGGGCTTATGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	29348112	29376666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29348208_29356469_29356697_29361292_29361487_29366038_29366206_29366915_29366977_29372469_29372670_29374397
ENSMUSG00000029769.17_0	chr6	+	3252	16	FSM	ENSMUSG00000029769.17	ENSMUST00000115275.8	3279	16	17	10	4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACACGAGACATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29396645	29426942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29396742_29397477_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29426623
ENSMUSG00000029769.17_2	chr6	+	2101	11	FSM	ENSMUSG00000029769.17	ENST00000487361.5	2118	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTCAGCCTAATTACAC	NA	NA	NA	NA	NA	NA	NA	NA	29397319	29426930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29412362_29412534_29412900_29413087_29421989_29422097_29426623
ENSMUSG00000029769.17_3	chr6	+	3983	18	FSM	ENSMUSG00000029769.17	ENST00000297788.9	3998	18	8	7	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACACGAGACATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29397318	29426942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29397586_29399199_29399449_29399533_29399609_29405869_29406191_29409223_29409336_29410072_29410242_29411246_29411385_29411708_29411868_29412362_29412534_29412900_29413087_29414784_29414980_29415429_29415655_29417070_29417578_29417930_29418153_29419100_29419383_29419985_29420265_29421989_29422097_29426623
ENSMUSG00000029771.13_0	chr6	+	2160	9	FSM	ENSMUSG00000029771.13	ENSMUST00000004392.12	2189	9	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCAGGTCTGCCCATT	NA	NA	NA	NA	NA	NA	NA	NA	29526645	29537311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29526774_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
ENSMUSG00000029771.13_1	chr6	+	2223	9	FSM	ENSMUSG00000029771.13	ENSMUST00000163511.7	2241	9	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTAAAAACCAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	29529284	29537304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29529483_29531124_29531331_29533950_29534141_29534533_29534593_29535039_29535074_29535251_29535510_29535723_29536117_29536202_29536322_29536538
ENSMUSG00000029775.15_1	chr6	+	5878	10	FSM	ENSMUSG00000029775.15	ENSMUST00000068259.10	5901	10	17	6	17	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTCCAAGTTGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	30401911	30455172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30402150_30427707_30427795_30439642_30439865_30441775_30441931_30444425_30444575_30446616_30446702_30447409_30447477_30447939_30447988_30449489_30449630_30450485
ENSMUSG00000029776.12_0	chr6	-	1810	8	FSM	ENSMUSG00000029776.12	ENSMUST00000031788.9	1825	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATTTTTTTGGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	52617367	52523220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52524048_52525799_52525957_52533422_52533500_52534763_52534898_52596961_52597084_52599835_52599946_52607173_52607335_52617145
ENSMUSG00000029777.11_0	chr6	+	2362	17	FSM	ENSMUSG00000029777.11	ENSMUST00000003572.10	2380	17	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTATAATCCATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	55014999	55056475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_55015219_55023398_55023501_55025051_55025155_55027304_55027447_55029160_55029250_55030113_55030191_55032734_55032881_55037893_55038044_55040075_55040239_55042432_55042598_55045045_55045154_55046325_55046472_55050323_55050410_55052366_55052477_55053939_55054034_55054567_55054759_55056204
ENSMUSG00000029780.15_0	chr6	-	1660	9	FSM	ENSMUSG00000029780.15	ENSMUST00000031793.8	1676	9	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCTGTTGTCCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	56900905	56859388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_56860044_56860659_56860861_56861693_56861857_56863648_56863739_56865307_56865394_56866447_56866495_56868476_56868547_56869774_56869874_56900656
ENSMUSG00000029781.8_0	chr6	+	2990	10	FSM	ENSMUSG00000029781.8	ENSMUST00000031795.8	3009	10	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATATCATCTGGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56809055	56856336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_56809413_56826622_56826769_56827547_56827738_56828346_56828493_56833217_56833408_56837640_56837787_56845704_56845892_56850351_56850498_56852653_56852818_56855018
ENSMUSG00000029782.21_0	chr6	-	3471	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	30509775	30481233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508802_30509683
ENSMUSG00000029782.21_1	chr6	-	3380	14	ISM	ENSMUSG00000029782.21	ENSMUST00000115160.10	3485	15	980	7	912	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCCTTGGTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	30508802	30481233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664
ENSMUSG00000029782.21_11	chr6	-	2267	15	FSM	ENSMUSG00000029782.21	ENSMUST00000115157.8	2273	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATATTGGCATCTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	30509717	30482419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30482985_30487373_30487448_30489291_30489390_30489474_30489590_30491085_30491184_30492595_30492722_30494736_30494834_30497165_30497238_30497816_30497993_30501899_30502102_30505731_30505974_30506784_30506917_30508452_30508512_30508664_30508842_30509683
ENSMUSG00000029787.11_0	chr6	+	6667	16	FSM	ENSMUSG00000029787.11	ENSMUST00000031805.11	6670	16	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGCTATTGATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	56691913	56738896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_56692200_56700460_56700582_56702060_56702147_56703235_56703308_56705172_56705263_56705581_56705649_56706704_56706746_56707626_56707666_56712347_56712418_56713422_56713962_56718353_56718489_56720316_56720537_56723265_56723384_56730349_56730404_56730822_56730912_56734256
ENSMUSG00000029790.17_16	chr6	-	1145	9	FSM	ENSMUSG00000029790.17	ENST00000675962.1	1161	9	3	13	3	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGGAAAAAAGAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	30693705	30655450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30680129_30680194_30693635
ENSMUSG00000029790.17_19	chr6	-	1211	11	FSM	ENSMUSG00000029790.17	ENST00000675935.1	1229	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAAGGCCTGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30693772	30655706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658915_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029790.17_2	chr6	-	2413	10	FSM	ENSMUSG00000029790.17	ENST00000675168.1	2413	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCACTTTAGGAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	30693708	30654401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30680129_30680194_30693635
ENSMUSG00000029790.17_21	chr6	-	944	10	FSM	ENSMUSG00000029790.17	ENST00000343969.10	957	10	5	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAAGGCCTGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30693703	30655706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30657287_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029790.17_22	chr6	-	1106	10	FSM	ENSMUSG00000029790.17	ENST00000675563.1	1122	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGAAGGCCTGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30693722	30655706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30656477_30656694_30657296_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30693635
ENSMUSG00000029790.17_6	chr6	-	2437	11	FSM	ENSMUSG00000029790.17	ENST00000676243.1	2447	11	8	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCCTTAGGTTACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30693729	30654455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30655850_30656477_30656694_30657287_30657412_30658355_30658424_30658771_30658924_30660868_30661014_30666265_30666336_30667379_30667442_30671321_30671370_30680129_30680194_30693635
ENSMUSG00000029797.14_0	chr6	+	2460	10	FSM	ENSMUSG00000029797.14	ENST00000465639.5	2477	10	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGGTCTGGCCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	48470080	48477452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48470838_48471005_48471123_48471757_48471897_48472041_48472245_48473069_48473607_48474246_48474518_48475044_48475141_48475266_48475328_48475577_48475709_48477304
ENSMUSG00000029798.12_0	chr6	+	4734	23	FSM	ENSMUSG00000029798.12	ENSMUST00000031817.10	4767	23	14	19	14	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAAATTCAAAACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57557998	57641598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_57558218_57560157_57560318_57561534_57561612_57575413_57575642_57576949_57577045_57581057_57581186_57584026_57584164_57584618_57584693_57587787_57587907_57588759_57588820_57595597_57595692_57596429_57596620_57602880_57603036_57623111_57623217_57624049_57624158_57629016_57629155_57631373_57631518_57634993_57635161_57636660_57636725_57637075_57637147_57639050_57639235_57639327_57639431_57639684
ENSMUSG00000029802.14_1	chr6	+	5701	16	FSM	ENSMUSG00000029802.14	ENSMUST00000031822.13	5717	16	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTCTGTTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	58573668	58672658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_58574094_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_10	chr6	+	2168	16	FSM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACTAAGGACATTA	NA	NA	NA	NA	NA	NA	NA	NA	58617548	58669486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_58617613_58632622_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029802.14_20	chr6	+	2101	15	ISM	ENSMUSG00000029802.14	ENSMUST00000114294.8	2178	16	15077	10	15077	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACTAAGGACATTA	NA	NA	NA	NA	NA	NA	NA	NA	58632625	58669486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_58632842_58640598_58640659_58641428_58641544_58642088_58642242_58643866_58644025_58646171_58646324_58648994_58649100_58651552_58651804_58655260_58655344_58660214_58660305_58661317_58661443_58662651_58662807_58666539_58666630_58667515_58667605_58669227
ENSMUSG00000029804.18_0	chr6	+	3587	23	FSM	ENSMUSG00000029804.18	ENSMUST00000031823.12	3596	23	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCTAACTTGTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	58808847	58881059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_58808918_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58880228
ENSMUSG00000029804.18_2	chr6	+	4715	25	FSM	ENSMUSG00000029804.18	ENSMUST00000041401.11	4731	25	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAAAACAGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	58810691	58897374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_58810757_58820588_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ENSMUSG00000029804.18_4	chr6	+	4652	24	ISM	ENSMUSG00000029804.18	ENSMUST00000041401.11	4731	25	9902	9	9902	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAAAACAGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	58820586	58897374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_58820844_58831857_58832018_58832722_58832800_58833577_58833800_58834679_58834772_58835937_58836069_58837236_58837398_58839957_58840035_58845626_58845752_58847138_58847199_58850718_58850831_58851195_58851386_58853473_58853638_58853752_58853867_58861934_58861959_58862052_58862143_58864392_58864564_58865604_58865749_58867052_58867220_58871032_58871100_58871526_58871610_58893396_58893581_58893766_58893870_58895697
ENSMUSG00000029810.16_0	chr6	-	1402	7	FSM	ENSMUSG00000029810.16	ENSMUST00000166247.8	1414	7	12	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAAGGTGTGGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	48818296	48810751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48811074_48811440_48811561_48812378_48812610_48812839_48812897_48813160_48813272_48815105_48815300_48817929
ENSMUSG00000029810.16_2	chr6	-	1631	7	FSM	ENSMUSG00000029810.16	ENSMUST00000164733.4	1648	7	8	9	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAATACCCTCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	48817906	48810767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48811074_48811440_48811561_48812378_48812610_48812839_48812897_48813160_48813272_48815105_48815300_48817294
ENSMUSG00000029810.16_3	chr6	-	1221	8	FSM	ENSMUSG00000029810.16	ENSMUST00000101429.11	1238	8	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAACTTGAAAATAATAC	NA	NA	NA	NA	NA	NA	NA	NA	48818048	48810777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48811074_48811440_48811561_48812378_48812610_48812839_48812897_48813160_48813272_48815105_48815300_48817294_48817388_48817929
ENSMUSG00000029814.11_13	chr6	-	954	8	FSM	ENSMUSG00000029814.11	ENST00000341855.4	964	8	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAAGGCTCAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	49191399	49064282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49082503_49082633_49191230
ENSMUSG00000029814.11_2	chr6	-	1745	8	FSM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCAGGCAGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	49085953	49063410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49084275_49084399_49085859
ENSMUSG00000029814.11_7	chr6	-	1647	7	ISM	ENSMUSG00000029814.11	ENST00000619562.4	1762	8	1566	10	1566	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCAAGCAGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	49084398	49063414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_49064375_49064701_49064816_49065363_49065496_49067909_49067985_49071073_49071191_49081107_49081234_49084275
ENSMUSG00000029815.13_0	chr6	+	2791	4	FSM	ENSMUSG00000029815.13	ENSMUST00000128616.6	2819	4	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTCAAAAAAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	49050741	49063670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49051038_49052019_49052199_49059778_49059861_49061436
ENSMUSG00000029816.11_0	chr6	+	3668	11	FSM	ENSMUSG00000029816.11	ENSMUST00000031840.10	3701	11	28	5	28	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAAGCATCTCTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	49013576	49035111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49013727_49019700_49019854_49020930_49021075_49022238_49022413_49024227_49024387_49024669_49025036_49027343_49027443_49027957_49028061_49028751_49028961_49032554_49032649_49033094
ENSMUSG00000029817.12_0	chr6	-	1785	8	FSM	ENSMUSG00000029817.12	ENSMUST00000031841.9	1799	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAAATGGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	49240956	49220867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_49221666_49221801_49221870_49222409_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUSG00000029817.12_1	chr6	-	1750	8	FSM	ENSMUSG00000029817.12	ENSMUST00000204189.3	1777	8	17	10	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAAAATGGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	49240927	49220867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_49221666_49221801_49221870_49222415_49222545_49223782_49223899_49225919_49226109_49227796_49227957_49229315_49229450_49240771
ENSMUSG00000029821.16_0	chr6	-	4362	8	ISM	ENSMUSG00000029821.16	ENSMUST00000101405.10	4383	9	10234	7	10234	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTTATTAAGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	50228493	50177210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_50180354_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255
ENSMUSG00000029821.16_2	chr6	-	2489	11	FSM	ENSMUSG00000029821.16	ENSMUST00000031845.13	2502	11	6	7	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGTGTAGTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50240836	50184387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713_50238898_50240623
ENSMUSG00000029821.16_3	chr6	-	2128	10	FSM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATGTGTAGTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50238749	50184387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255_50228494_50238713
ENSMUSG00000029821.16_4	chr6	-	2084	9	ISM	ENSMUSG00000029821.16	ENSMUST00000170142.8	2133	10	10263	6	10241	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTATGTGTAGTTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	50228486	50184388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_50185187_50193329_50193404_50196216_50196419_50197968_50198097_50199715_50199881_50204258_50204380_50206265_50206438_50222909_50223103_50228255
ENSMUSG00000029822.16_10	chr6	-	3289	22	FSM	ENSMUSG00000029822.16	ENSMUST00000071728.11	3307	22	10	8	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTAATGTGTGGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	50433140	50273786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50313194_50313326_50321853_50322011_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964_50330082_50347102_50347339_50405308_50405401_50432804
ENSMUSG00000029822.16_3	chr6	-	4813	22	FSM	ENSMUSG00000029822.16	ENST00000313367.7	4831	22	13	5	13	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTGTTTGCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50330073	50270589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_50270735_50271936_50274142_50276295_50276419_50277903_50278031_50279996_50280142_50285270_50285416_50286292_50286372_50289611_50289676_50297016_50297155_50299952_50300204_50304354_50304449_50305649_50305785_50310165_50310274_50313194_50313326_50321853_50322011_50322990_50323084_50323307_50323412_50324345_50324470_50324950_50325119_50328823_50328938_50329763_50329818_50329964
ENSMUSG00000029823.17_12	chr6	+	2011	9	ISM	ENSMUSG00000029823.17	ENST00000263545.7	2084	10	4846	14	4846	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAGTAAATATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	38547451	38586165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029823.17_3	chr6	+	2070	10	FSM	ENSMUSG00000029823.17	ENST00000263545.7	2084	10	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAGTAAATATTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	38542605	38586165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38542658_38547444_38547540_38561975_38562075_38566110_38566222_38568222_38568367_38569553_38569731_38570312_38570405_38575719_38575750_38580211_38580404_38585087
ENSMUSG00000029826.15_0	chr6	-	4930	13	FSM	ENSMUSG00000029826.15	ENSMUST00000114900.8	4944	13	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTCTGTTTATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	38331195	38282221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38284392_38288112_38288247_38288524_38288656_38289328_38289420_38293255_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029826.15_18	chr6	-	3388	9	FSM	ENSMUSG00000029826.15	ENSMUST00000031850.10	3400	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTGCAGTTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	38331530	38292606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38293359_38296638_38296760_38302126_38302302_38306083_38306208_38308697_38308797_38309076_38310124_38313346_38313600_38317154_38317291_38330849
ENSMUSG00000029830.16_0	chr6	-	1059	10	FSM	ENSMUSG00000029830.16	ENST00000288513.9	1067	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACGCGCTTTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38008027	37963450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_37963547_37988173_37988264_37989225_37989308_37991691_37991804_37993954_37994167_37996612_37996687_37998483_37998613_37999928_38000055_38003884_38003949_38007953
ENSMUSG00000029830.16_1	chr6	-	983	9	ISM	ENSMUSG00000029830.16	ENST00000288513.9	1067	10	4081	8	4081	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGACGCGCTTTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	38003946	37963450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_37963547_37988173_37988264_37989225_37989308_37991691_37991804_37993954_37994167_37996612_37996687_37998483_37998613_37999928_38000055_38003884
ENSMUSG00000029833.18_0	chr6	+	4002	19	FSM	ENSMUSG00000029833.18	ENSMUST00000031859.14	4042	19	17	23	17	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37847762	37943208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922725_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ENSMUSG00000029833.18_2	chr6	+	3911	19	FSM	ENSMUSG00000029833.18	ENSMUST00000120428.8	3940	19	6	23	6	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATCAGGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	37847751	37943208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_37848410_37880467_37880587_37885151_37885300_37892099_37892233_37896308_37896426_37904460_37904576_37908288_37908436_37920347_37920466_37922455_37922623_37926156_37926334_37928386_37928561_37930428_37930565_37933337_37933411_37933938_37934108_37934443_37934773_37935496_37935630_37937715_37937791_37941637_37941788_37942435
ENSMUSG00000029836.16_1	chr6	+	1878	6	FSM	ENSMUSG00000029836.16	ENSMUST00000031862.14	1889	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51447519	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51447720_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_12	chr6	+	1675	5	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	1124	1	1124	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51448798	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_13	chr6	+	1512	4	ISM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	1153	1	1124	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51448798	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_51448849_51452210_51452354_51458703_51458799_51459459
ENSMUSG00000029836.16_16	chr6	+	1626	4	ISM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	4535	1	4535	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51452209	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_5	chr6	+	1718	6	FSM	ENSMUSG00000029836.16	ENSMUST00000114446.8	1719	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51447674	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51455417_51455581_51458703_51458799_51459459
ENSMUSG00000029836.16_8	chr6	+	1581	5	FSM	ENSMUSG00000029836.16	ENSMUST00000114445.8	1585	5	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGATGACTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51447648	51460683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51447715_51448795_51448849_51452210_51452354_51458703_51458799_51459459
ENSMUSG00000029838.12_0	chr6	-	1599	5	FSM	ENSMUSG00000029838.12	ENSMUST00000101534.5	1614	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATGTGCTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	36787146	36691869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_36692698_36718212_36718375_36720261_36720436_36721323_36721441_36786828
ENSMUSG00000029840.9_0	chr6	-	3942	4	FSM	ENSMUSG00000029840.9	ENSMUST00000031866.9	3960	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGATACTAGATGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	35516814	35485849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35489253_35498834_35498919_35499616_35499731_35516473
ENSMUSG00000029843.5_0	chr6	-	1877	15	FSM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCGAGCGGACAGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	35284384	35245767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260305_35264281_35264337_35264688_35264853_35266728_35266866_35278659_35278789_35284292
ENSMUSG00000029843.5_1	chr6	-	1781	14	ISM	ENSMUSG00000029843.5	ENST00000354042.8	1889	15	5603	9	5603	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAACGCGAGCGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	35278788	35245771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_35245904_35247278_35247417_35248543_35248706_35251850_35251965_35252566_35252674_35253383_35253486_35255171_35255274_35256345_35256466_35257243_35257432_35260173_35260305_35264281_35264337_35264688_35264853_35266728_35266866_35278659
ENSMUSG00000029844.10_0	chr6	-	2235	2	FSM	ENSMUSG00000029844.10	ENSMUST00000000964.6	2251	2	12	4	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATGCCTAAGCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	52135285	52132573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52134070_52134546
ENSMUSG00000029851.6_0	chr6	-	4483	8	FSM	ENSMUSG00000029851.6	ENSMUST00000031879.5	4497	8	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATAAATCCTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	42622183	42599958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42601550_42603050_42603389_42604207_42604448_42604852_42605067_42605955_42606054_42606334_42607330_42619402_42620040_42621813
ENSMUSG00000029859.7_0	chr6	-	3252	18	FSM	ENSMUSG00000029859.7	ENSMUST00000073387.5	3273	18	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCATCTCTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	42350186	42335425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338219_42338427_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42341599_42341709_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
ENSMUSG00000029859.7_6	chr6	-	2925	16	FSM	ENSMUSG00000029859.7	ENSMUST00000204357.2	2948	16	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGGACGGGGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	42350188	42335658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42335781_42335869_42336026_42337478_42337673_42337938_42338089_42338527_42338590_42338710_42338897_42339590_42339717_42340495_42340555_42340743_42340841_42341094_42341246_42341470_42342055_42342352_42342509_42342709_42343113_42344519_42344802_42349108_42349177_42350059
ENSMUSG00000029860.17_0	chr6	+	2589	10	FSM	ENSMUSG00000029860.17	ENSMUST00000203652.3	2605	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCACCCACAGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	42326770	42335489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_13	chr6	+	2289	9	FSM	ENSMUSG00000029860.17	ENSMUST00000070635.13	2301	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCTAGTACTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	42326814	42335326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785
ENSMUSG00000029860.17_20	chr6	+	3179	11	FSM	ENSMUSG00000029860.17	ENSMUST00000164375.4	3188	11	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTCAGAGGAACACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	42326974	42337140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42327054_42327190_42327411_42327879_42328083_42328203_42328297_42328408_42328904_42332850_42332972_42333095_42333266_42333365_42333545_42334246_42334368_42334785_42334920_42335776
ENSMUSG00000029861.18_0	chr6	-	4043	6	FSM	ENSMUSG00000029861.18	ENSMUST00000031891.15	4065	6	21	1	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTGACTATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	42301553	42292246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42295566_42295784_42295929_42297721_42297920_42298183_42298278_42298840_42298951_42301375
ENSMUSG00000029861.18_1	chr6	-	4074	7	FSM	ENSMUSG00000029861.18	ENSMUST00000143278.8	4104	7	29	1	-22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTGACTATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	42301548	42292246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42295566_42295784_42295929_42297721_42297920_42298183_42298278_42298524_42298561_42298840_42298951_42301375
ENSMUSG00000029862.17_0	chr6	+	3535	23	FSM	ENSMUSG00000029862.17	ENSMUST00000031894.13	3545	23	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCCATCAGTGCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	42263621	42291583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42263881_42267006_42267128_42267520_42267653_42268262_42268392_42268558_42268693_42269874_42269953_42271011_42271091_42275732_42275859_42276171_42276257_42276433_42276536_42276838_42276924_42277161_42277312_42282179_42282250_42282404_42282516_42284015_42284230_42284459_42284594_42286874_42287108_42287460_42287600_42287856_42287937_42288145_42288185_42289987_42290093_42290171_42290259_42290740
ENSMUSG00000029863.14_0	chr6	+	3519	11	FSM	ENSMUSG00000029863.14	ENSMUST00000031895.13	3529	11	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTTTGTGCCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	42241923	42259437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42242132_42244432_42244584_42244827_42244996_42245140_42245223_42245819_42245915_42246213_42246391_42250850_42250980_42253628_42253720_42256710_42256861_42257017_42257128_42257279
ENSMUSG00000029864.8_0	chr6	+	922	8	FSM	ENSMUSG00000029864.8	ENSMUST00000031897.8	930	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCCACCAGACAAAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	42222868	42227367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_42223028_42223483_42223566_42223744_42223874_42224417_42224519_42224667_42224704_42226312_42226430_42226772_42226867_42227163
ENSMUSG00000029869.8_0	chr6	+	3743	18	FSM	ENSMUSG00000029869.8	ENSMUST00000114732.3	3762	18	12	7	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGTGTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	41582427	41597436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_41582755_41589577_41589650_41590148_41590353_41590685_41590751_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUSG00000029869.8_22	chr6	+	3268	15	ISM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	575	5	575	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACAAGTTGAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	41590154	41597431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_41590353_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUSG00000029869.8_9	chr6	+	3338	16	FSM	ENSMUSG00000029869.8	ENST00000411471.6	3345	16	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTACAAGTTGAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	41589581	41597431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_41589650_41590152_41590353_41591012_41591776_41592422_41592579_41592850_41593202_41593393_41593519_41593681_41593845_41594197_41594313_41594560_41594614_41594780_41594901_41595001_41595250_41595504_41595679_41596164_41596315_41596540_41596735_41596856_41597013_41597129
ENSMUSG00000029875.6_0	chr15	+	2966	1	FSM	ENSMUSG00000029875.6	ENSMUST00000031914.6	2977	1	11	0	11	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGGTACTAAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	98065049	98068015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98065000_98068000
ENSMUSG00000029882.6_0	chr6	-	2127	5	FSM	ENSMUSG00000029882.6	ENSMUST00000031931.6	2142	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGGTGTTATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41012432	41007205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_41008719_41009238_41009376_41009875_41010130_41011177_41011341_41012372
ENSMUSG00000029882.6_1	chr6	-	2067	4	ISM	ENSMUSG00000029882.6	ENSMUST00000031931.6	2142	5	1103	4	1103	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGGTGTTATTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	41011340	41007205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_41008719_41009238_41009376_41009875_41010130_41011177
ENSMUSG00000029910.15_0	chr6	+	7542	6	FSM	ENSMUSG00000029910.15	ENSMUST00000116605.8	7557	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTATATGTATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	66512381	66524197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754_66516935_66517409
ENSMUSG00000029910.15_1	chr6	+	1720	5	FSM	ENSMUSG00000029910.15	ENSMUST00000101343.2	1725	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAATCAAGCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66512456	66517975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66512584_66512941_66513089_66514552_66514674_66515948_66516053_66516754
ENSMUSG00000029911.15_0	chr6	+	4384	7	FSM	ENSMUSG00000029911.15	ENSMUST00000114779.9	4398	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAGGTATTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	40448294	40461629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_2	chr6	+	1053	6	FSM	ENSMUSG00000029911.15	ENSMUST00000031971.13	1063	6	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGATAGACATGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	40448352	40455515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40448394_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856
ENSMUSG00000029911.15_3	chr6	+	1153	6	FSM	ENSMUSG00000029911.15	ENSMUST00000121360.8	1188	6	27	8	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGAGTGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	40448428	40457921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_4	chr6	+	909	7	FSM	ENSMUSG00000029911.15	ENSMUST00000117411.8	933	7	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGAGTGGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	40448427	40457921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40448760_40449004_40449068_40451598_40451660_40453300_40453442_40453681_40453770_40454856_40454946_40457786
ENSMUSG00000029911.15_6	chr6	+	390	5	FSM	ENSMUSG00000029911.15	ENST00000445848.2	404	5	0	14	0	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAAAAGAAAAGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	40451596	40457810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40451660_40453300_40453442_40453681_40453755_40454856_40454946_40457786
ENSMUSG00000029913.15_0	chr6	+	2120	15	FSM	ENSMUSG00000029913.15	ENSMUST00000031976.14	2155	15	19	16	-15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTAAATACAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	65755990	65913344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65832932_65833108_65834626_65834802_65836340_65836463_65839898_65839979_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUSG00000029913.15_2	chr6	+	1459	11	FSM	ENSMUSG00000029913.15	ENSMUST00000031973.13	1488	11	26	3	26	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAAATAAATTCAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	65756034	65913279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_65756178_65771283_65771368_65808232_65808356_65846164_65846250_65847295_65847454_65858032_65858127_65860506_65860668_65863068_65863163_65878757_65878844_65904900_65905006_65912953
ENSMUSG00000029915.15_0	chr6	-	525	5	FSM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTGAATTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	40562172	40554887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_40555015_40556306_40556414_40558733_40558871_40561299_40561365_40562083
ENSMUSG00000029915.15_1	chr6	-	436	4	ISM	ENSMUSG00000029915.15	ENST00000551012.6	539	5	816	6	816	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTGAATTTTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	40561364	40554887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_40555015_40556306_40556414_40558733_40558871_40561299
ENSMUSG00000029916.12_0	chr6	+	2515	16	FSM	ENSMUSG00000029916.12	ENSMUST00000031977.12	2531	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATATCCAGTGTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	40302114	40373689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40302465_40306426_40306534_40324345_40324386_40329286_40329367_40333978_40334055_40341208_40341302_40343674_40343708_40345514_40345610_40353155_40353226_40358137_40358218_40360693_40360752_40363747_40363896_40364377_40364476_40369586_40369658_40371547_40371633_40372658
ENSMUSG00000029918.10_0	chr6	-	1082	3	FSM	ENSMUSG00000029918.10	ENSMUST00000031978.9	1107	3	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGGGAAAAAACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	39787911	39778751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39779479_39782304_39782546_39787797
ENSMUSG00000029918.10_3	chr6	-	498	3	FSM	ENSMUSG00000029918.10	ENSMUST00000114797.2	500	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGTGTTTAAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	39787819	39779127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39779479_39782420_39782546_39787797
ENSMUSG00000029920.10_0	chr6	+	5154	24	FSM	ENSMUSG00000029920.10	ENSMUST00000031984.9	5168	24	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCACACCCTTTGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	65019600	65093039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_65019946_65020189_65020430_65029603_65029782_65033386_65033553_65035049_65035117_65044030_65044123_65048968_65049071_65050177_65050260_65051745_65052135_65060787_65060988_65067079_65067171_65069478_65069579_65071114_65071175_65071273_65071350_65073014_65073151_65073673_65073812_65075593_65075690_65075779_65075898_65076249_65076372_65084758_65084948_65085635_65085755_65087353_65087537_65088759_65088870_65091284
ENSMUSG00000029920.10_6	chr6	+	712	3	FSM	ENSMUSG00000029920.10	ENSMUST00000204696.3	734	3	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTCAAACCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	65019824	65021170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_65019946_65020189_65020430_65020819
ENSMUSG00000029922.16_1	chr6	-	3008	8	FSM	ENSMUSG00000029922.16	ENSMUST00000031985.13	3046	8	11	27	11	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAACGATTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	39397385	39374764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381809_39382664_39382895_39387021_39387151_39397032
ENSMUSG00000029922.16_17	chr6	-	782	2	FSM	ENSMUSG00000029922.16	ENST00000480552.5	799	2	8	9	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAGTCTGTGTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	39387138	39377693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39378359_39387021
ENSMUSG00000029922.16_20	chr6	-	734	3	FSM	ENSMUSG00000029922.16	ENSMUST00000114822.2	751	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTGAAGTGTCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	39397225	39382482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39382895_39387021_39387151_39397032
ENSMUSG00000029922.16_3	chr6	-	1177	7	FSM	ENSMUSG00000029922.16	ENST00000433469.2	1225	7	48	0	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATAGCAGCGTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	39387098	39376166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382667_39382895_39387021
ENSMUSG00000029922.16_4	chr6	-	1219	6	ISM	ENSMUSG00000029922.16	ENST00000640520.1	1288	7	4196	0	4196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACTTCCCAGGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	39382890	39376043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_39376369_39376731_39376871_39377328_39377440_39378143_39378359_39381581_39381788_39382667
ENSMUSG00000029924.13_0	chr6	-	4024	15	FSM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAACATTTTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	39354608	39311711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822_39343981_39354552
ENSMUSG00000029924.13_1	chr6	-	3957	14	ISM	ENSMUSG00000029924.13	ENSMUST00000090243.8	4030	15	10640	5	10637	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGAAACATTTTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	39343969	39311711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_39314219_39315682_39315749_39321186_39321339_39322228_39322277_39322828_39322931_39324222_39324365_39326273_39326453_39326983_39327069_39329587_39329685_39331910_39332057_39334333_39334418_39336883_39336977_39341436_39341546_39343822
ENSMUSG00000029925.14_0	chr6	+	1671	12	FSM	ENSMUSG00000029925.14	ENST00000652056.1	1688	12	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAGGCACGTGGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	38895855	39061305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38896176_38925475_38925570_38928811_38928865_38959054_38959152_38978185_38978303_38994825_38994915_38997972_38998122_38999902_39000034_39004573_39004889_39048289_39048382_39057872_39058011_39061229
ENSMUSG00000029992.15_0	chr6	+	6213	19	FSM	ENSMUSG00000029992.15	ENSMUST00000113658.8	6238	19	17	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTTGCTGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	87019844	87069171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87019988_87027902_87028011_87030732_87030841_87031582_87031709_87033125_87033185_87034611_87034747_87036361_87036424_87037502_87037583_87040786_87040893_87043605_87043770_87044665_87044762_87050363_87050462_87053238_87053360_87054064_87054223_87059454_87059570_87062233_87062362_87063285_87063454_87064298_87064461_87065095
ENSMUSG00000029993.17_0	chr6	+	1174	9	FSM	ENSMUSG00000029993.17	ENSMUST00000120240.8	1195	9	6	15	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	NA	NA	NA	NA	NA	NA	NA	86986223	87005428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86986372_86986731_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000029993.17_2	chr6	+	940	8	FSM	ENSMUSG00000029993.17	ENSMUST00000032060.15	948	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	NA	NA	NA	NA	NA	NA	NA	86986817	87005428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997825_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000029993.17_3	chr6	+	929	8	FSM	ENSMUSG00000029993.17	ENSMUST00000117583.8	950	8	8	13	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGATATAAATACATTT	NA	NA	NA	NA	NA	NA	NA	NA	86986825	87005428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86986942_86989888_86989990_86992547_86992684_86996346_86996414_86997700_86997822_87000109_87000171_87002467_87002643_87005276
ENSMUSG00000029994.18_0	chr6	-	1922	12	FSM	ENSMUSG00000029994.18	ENSMUST00000113675.8	2030	12	101	7	101	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTGTGTATTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86742791	86713828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743
ENSMUSG00000029994.18_2	chr6	-	1992	13	FSM	ENSMUSG00000029994.18	ENSMUST00000001187.15	2002	13	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGGGTGTGTATTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86770562	86713828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731834_86731949_86734800_86734896_86737655_86737744_86742743_86742790_86770490
ENSMUSG00000029994.18_20	chr6	-	1350	13	FSM	ENSMUSG00000029994.18	ENST00000409920.5	1361	13	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGATTATTTCCTCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86770627	86714490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86714806_86718817_86718941_86720099_86720159_86721606_86721703_86725868_86725963_86728044_86728102_86729134_86729215_86730784_86730876_86731900_86731949_86734800_86734896_86737655_86737744_86742739_86742790_86770473
ENSMUSG00000029998.15_0	chr6	-	4277	6	FSM	ENSMUSG00000029998.15	ENSMUST00000032065.15	4295	6	12	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAGCAATAAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	86374124	86362993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86366354_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ENSMUSG00000029998.15_5	chr6	-	1188	6	FSM	ENSMUSG00000029998.15	ENST00000264441.9	1205	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGACGACCTGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	86374063	86365735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86366068_86368657_86368811_86369118_86369331_86371390_86371566_86372895_86373103_86373954
ENSMUSG00000029999.15_0	chr6	+	344	4	FSM	ENSMUSG00000029999.15	ENST00000418333.6	353	4	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGGCGTCCATGCTA	NA	NA	NA	NA	NA	NA	NA	NA	86240149	86249473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86240259_86246911_86247062_86248361_86248389_86249415
ENSMUSG00000030002.16_0	chr6	-	6424	9	FSM	ENSMUSG00000030002.16	ENSMUST00000032071.13	6435	9	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTGTACTATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85938641	85919252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85924759_85926599_85926780_85926999_85927076_85927495_85927543_85929286_85929348_85930352_85930477_85935565_85935698_85936197_85936274_85938419
ENSMUSG00000030007.9_0	chr6	+	2431	12	FSM	ENSMUSG00000030007.9	ENSMUST00000032078.9	2441	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGCTCTGCTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	85428505	85445457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85429110_85436096_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441761_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030007.9_13	chr6	+	1558	11	FSM	ENSMUSG00000030007.9	ENST00000406551.2	1571	11	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCATCAGCTGGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	85436108	85445213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85436251_85436923_85437031_85438026_85438153_85438489_85438543_85439007_85439180_85441774_85441927_85442881_85443071_85443605_85443704_85444008_85444142_85444560_85444768_85445034
ENSMUSG00000030008.10_0	chr6	-	1013	5	FSM	ENSMUSG00000030008.10	ENSMUST00000032080.9	1038	5	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAGCTCACCAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	85428252	85423803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85424280_85424502_85424671_85424917_85425028_85425472_85425574_85428094
ENSMUSG00000030016.15_0	chr6	+	9023	27	FSM	ENSMUSG00000030016.15	ENSMUST00000204751.3	9033	27	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	83891358	83966532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83891472_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030016.15_10	chr6	+	6162	28	FSM	ENSMUSG00000030016.15	ENSMUST00000032088.14	6199	28	24	13	24	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATTCATTAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	83891397	83963618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83954412_83955003_83955070_83955975_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030016.15_20	chr6	+	3811	25	FSM	ENSMUSG00000030016.15	ENSMUST00000203324.3	3822	25	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGATGGAGGAAAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	83905841	83963599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030016.15_6	chr6	+	4354	26	NNC	ENSMUSG00000030016.15	novel	4366	26	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAACACTGTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83891378	83963846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83933675_83933745_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83958659_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030016.15_7	chr6	+	4344	26	FSM	ENSMUSG00000030016.15	ENSMUST00000113835.10	4356	26	3	9	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCAACACTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	83891374	83963844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83891462_83905634_83907148_83911930_83911993_83918226_83918266_83919815_83920124_83921594_83921870_83923198_83923346_83924800_83924924_83930065_83930125_83930316_83930370_83931692_83931744_83934490_83934575_83935165_83935235_83936912_83936951_83938958_83939091_83942510_83942640_83943428_83943471_83944274_83944410_83946098_83946222_83949227_83949266_83953183_83953333_83956828_83956892_83958665_83958768_83960957_83961057_83961758_83961878_83963539
ENSMUSG00000030019.7_0	chr6	+	2943	1	FSM	ENSMUSG00000030019.7	ENSMUST00000032094.7	2963	1	3	17	3	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGCACAAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	119456631	119459574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_119456600_119459600
ENSMUSG00000030030.6_0	chr6	+	1998	4	FSM	ENSMUSG00000030030.6	ENSMUST00000032106.6	2020	4	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAACTGACTGGCAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83133402	83139922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83133573_83137893_83138116_83138197_83138420_83138538
ENSMUSG00000030030.6_1	chr6	+	2068	2	FSM	ENSMUSG00000030030.6	ENSMUST00000203203.2	2070	2	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCACACTGGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	83133483	83139872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83133573_83137893
ENSMUSG00000030030.6_2	chr6	+	1980	1	NIC	ENSMUSG00000030030.6	novel	2020	4	NA	NA	4410	-1	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCACACTGGGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	83137892	83139872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_83137900_83139900
ENSMUSG00000030031.15_1	chr6	+	946	2	FSM	ENSMUSG00000030031.15	ENST00000460576.5	955	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGATCCTCAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	95094893	95104341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_95094956_95103457
ENSMUSG00000030031.15_2	chr6	+	877	1	ISM	ENSMUSG00000030031.15	ENSMUST00000032107.10	4869	4	8744	2430	8571	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	184	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGATCCTCAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	95103464	95104341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_95103500_95104300
ENSMUSG00000030032.15_6	chr6	-	4571	10	FSM	ENSMUSG00000030032.15	ENSMUST00000153148.8	4634	10	50	13	50	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGAAACTAGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	83133329	83126354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156
ENSMUSG00000030032.15_7	chr6	-	1208	11	FSM	ENSMUSG00000030032.15	ENSMUST00000125894.9	1216	11	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGTCCTTGTCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	83133376	83129695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83129879_83129956_83130032_83130234_83130398_83130497_83130599_83131481_83131610_83131903_83131958_83132051_83132119_83132459_83132523_83132630_83132854_83133156_83133228_83133296
ENSMUSG00000030034.13_0	chr6	-	1489	5	FSM	ENSMUSG00000030034.13	ENSMUST00000113935.9	1503	5	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTATCGAATTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	83102399	83098746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83099346_83100974_83101145_83101287_83101407_83101565_83101759_83101991
ENSMUSG00000030035.15_0	chr6	-	1322	5	FSM	ENSMUSG00000030035.15	ENST00000393972.7	1325	5	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGGTAGAGTAGATCT	NA	NA	NA	NA	NA	NA	NA	NA	83098439	83096017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097855_83098183
ENSMUSG00000030035.15_1	chr6	-	1404	5	FSM	ENSMUSG00000030035.15	ENSMUST00000032111.11	1419	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTGCTTGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	83098533	83096032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83097752_83097858_83098183
ENSMUSG00000030035.15_2	chr6	-	1293	4	FSM	ENSMUSG00000030035.15	ENSMUST00000113936.10	1314	4	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGCTGCTTGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	83098527	83096032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83096702_83096848_83097026_83097165_83097269_83098183
ENSMUSG00000030036.9_0	chr6	+	2758	4	FSM	ENSMUSG00000030036.9	ENSMUST00000032114.8	2780	4	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCTAACTGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	83092486	83095867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83092908_83092999_83093230_83093608_83093806_83093957
ENSMUSG00000030041.10_3	chr6	+	1977	9	FSM	ENSMUSG00000030041.10	ENST00000409585.5	1988	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CACAAAACAAGAAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	82933425	83007279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_82933688_82944947_82945134_82958796_82958966_82980710_82980885_82982486_82982650_82983298_82983441_83003178_83003390_83005372_83005514_83006750
ENSMUSG00000030042.16_1	chr6	-	1758	4	FSM	ENSMUSG00000030042.16	ENSMUST00000095786.6	1769	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTCTTGAAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	82629900	82623682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_82625018_82628417_82628460_82629063_82629149_82629604
ENSMUSG00000030045.11_0	chr6	-	4984	5	FSM	ENSMUSG00000030045.11	ENSMUST00000032124.9	5000	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCCTTAGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81942929	81934837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_81939144_81939296_81939479_81940914_81941050_81941219_81941339_81942687
ENSMUSG00000030051.11_0	chr6	-	3116	10	FSM	ENSMUSG00000030051.11	ENSMUST00000065997.5	3132	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCAGTTGCTGTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	87649121	87605413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648971
ENSMUSG00000030051.11_1	chr6	-	1777	10	FSM	ENSMUSG00000030051.11	ENST00000303795.9	1792	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCTGCCCTGAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	87648958	87606719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUSG00000030051.11_2	chr6	-	1864	11	FSM	ENSMUSG00000030051.11	ENSMUST00000032130.8	1889	11	25	0	-21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCTTTGATCTTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	87649150	87606730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87606904_87606997_87607158_87613911_87613959_87618871_87618998_87622995_87623334_87630689_87630875_87635414_87635548_87635822_87635971_87640666_87640840_87645397_87645470_87648841
ENSMUSG00000030055.17_0	chr6	-	4603	3	FSM	ENSMUSG00000030055.17	ENSMUST00000078647.11	4605	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATGGTCTATCACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	87788761	87765836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87769823_87771595_87771780_87788328
ENSMUSG00000030055.17_1	chr6	-	1235	2	FSM	ENSMUSG00000030055.17	ENSMUST00000032135.6	1262	2	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTTTTAAACATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87788740	87770956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87771780_87788328
ENSMUSG00000030056.9_0	chr6	-	5813	11	FSM	ENSMUSG00000030056.9	ENSMUST00000089497.7	5837	11	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGGACATGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	87815767	87791261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709_87812733_87815625
ENSMUSG00000030056.9_4	chr6	-	855	10	FSM	ENSMUSG00000030056.9	ENST00000393292.7	861	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTGAGCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87812733	87796082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799317_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ENSMUSG00000030056.9_5	chr6	-	829	9	ISM	ENSMUSG00000030056.9	ENST00000393292.7	861	10	759	6	759	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTGAGCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87811974	87796082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799317_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924
ENSMUSG00000030056.9_6	chr6	-	777	8	ISM	ENSMUSG00000030056.9	ENST00000393292.7	861	10	1260	6	1260	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGGCTGAGCCAGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	87811473	87796082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_87796186_87796538_87796626_87798489_87798612_87799317_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409
ENSMUSG00000030057.16_0	chr6	-	2168	5	FSM	ENSMUSG00000030057.16	ENSMUST00000032138.15	2178	5	10	0	10	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	2685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87828078	87819596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87821139_87822103_87822306_87822446_87822540_87822637_87822776_87827885
ENSMUSG00000030057.16_1	chr6	-	2165	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204653.3	2175	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87828078	87819596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822637_87822776_87827885
ENSMUSG00000030057.16_16	chr6	-	1644	5	FSM	ENSMUSG00000030057.16	ENSMUST00000113619.8	1661	5	10	7	-10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTGAAAGATGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87828052	87820070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822658_87822776_87827885
ENSMUSG00000030057.16_17	chr6	-	1597	5	FSM	ENSMUSG00000030057.16	ENSMUST00000204890.3	1614	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTGAAAGATGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87828002	87820070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87821139_87822103_87822303_87822446_87822540_87822655_87822776_87827885
ENSMUSG00000030058.18_0	chr6	+	4120	24	FSM	ENSMUSG00000030058.18	ENSMUST00000113607.10	4140	24	10	10	10	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	2399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGAAATTGGTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	87864805	87890567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87865055_87866052_87866106_87866638_87866720_87866937_87867010_87867171_87867252_87868930_87869007_87869187_87869281_87869614_87869702_87870777_87870936_87871022_87871157_87872675_87872744_87872908_87873098_87874934_87875031_87879179_87879424_87880466_87880543_87881069_87881174_87881797_87881924_87882180_87882250_87884354_87884498_87884791_87884964_87885517_87885616_87886645_87886785_87887021_87887121_87889153
ENSMUSG00000030059.16_0	chr6	-	5720	17	FSM	ENSMUSG00000030059.16	ENSMUST00000095664.6	5732	17	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATCCAGTAAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	97156075	97129961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97132459_97133804_97133931_97135006_97135160_97135421_97135524_97137203_97137297_97137491_97137562_97138328_97138522_97140479_97140637_97141009_97141103_97144209_97144367_97145048_97145216_97145708_97145852_97147286_97147393_97149173_97149301_97150260_97150365_97152730_97153930_97155842
ENSMUSG00000030060.15_0	chr6	+	1455	7	FSM	ENSMUSG00000030060.15	ENSMUST00000032141.14	1464	7	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCTGGCTCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	87890921	87913607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87890994_87891472_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ENSMUSG00000030060.15_7	chr6	+	1382	6	FSM	ENSMUSG00000030060.15	ENSMUST00000113606.2	1572	6	186	4	186	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTCTGGCTCTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	87891473	87913607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87891678_87894820_87894965_87898507_87898634_87902613_87902793_87910223_87910417_87913071
ENSMUSG00000030061.17_0	chr6	-	2465	17	FSM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCAATTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	97182521	97160630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182493
ENSMUSG00000030061.17_10	chr6	-	2242	18	FSM	ENSMUSG00000030061.17	ENSMUST00000089287.7	2257	18	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAACTTAAAGTATA	NA	NA	NA	NA	NA	NA	NA	NA	97182598	97160972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434_97180556_97182266_97182309_97182493
ENSMUSG00000030061.17_2	chr6	-	2423	16	ISM	ENSMUSG00000030061.17	ENSMUST00000164744.8	2465	17	1980	0	1980	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAATTGCAATTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	97180541	97160630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_97161827_97162301_97162357_97162443_97162508_97162610_97162712_97163029_97163112_97163197_97163235_97163623_97163678_97166489_97166604_97166714_97166818_97168053_97168210_97168486_97168552_97169701_97169746_97173797_97173879_97176199_97176283_97178877_97178959_97180434
ENSMUSG00000030062.8_0	chr6	+	3613	10	FSM	ENSMUSG00000030062.8	ENSMUST00000032143.8	3633	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	5190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAATATACAAAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	88061473	88082276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88061777_88065331_88065397_88066970_88067278_88070767_88070978_88072504_88072698_88076255_88076356_88077610_88077750_88077843_88077964_88078956_88079203_88080346
ENSMUSG00000030067.18_0	chr6	-	7019	18	FSM	ENSMUSG00000030067.18	ENSMUST00000113326.9	7029	18	3	7	3	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCACAGACTAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	99243473	98902305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987016_98992384_98992472_98993488_98993627_99052814_99052911_99139799_99139991_99237305_99237381_99243307
ENSMUSG00000030067.18_15	chr6	-	1562	12	ISM	ENSMUSG00000030067.18	ENSMUST00000177229.8	1848	15	18199	-35	18198	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGGGAAAAAAAAGCAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	98987021	98907015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864
ENSMUSG00000030067.18_16	chr6	-	1641	13	FSM	ENSMUSG00000030067.18	ENST00000497355.7	1652	13	3	8	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	99052892	98907011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_99052814
ENSMUSG00000030067.18_17	chr6	-	2122	16	FSM	ENSMUSG00000030067.18	ENST00000648426.1	2142	16	12	8	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	99139978	98907011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98917955_98918126_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99052814_99052899_99139779
ENSMUSG00000030067.18_18	chr6	-	2769	20	FSM	ENSMUSG00000030067.18	ENST00000649610.1	2785	20	8	8	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	99497950	98907011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922385_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992472_98993488_98993627_99052814_99052899_99139779_99139991_99237305_99237381_99285304_99285400_99412176_99412307_99497561
ENSMUSG00000030067.18_19	chr6	-	2420	16	FSM	ENSMUSG00000030067.18	ENST00000648748.2	2438	16	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGCAAAACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	99073631	98907011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922385_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992475_98993488_98993627_99052814_99052914_99073098
ENSMUSG00000030067.18_7	chr6	-	2455	15	FSM	ENSMUSG00000030067.18	ENSMUST00000177437.8	2468	15	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAATTTTTTAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	99005211	98906431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_98907196_98912234_98912402_98916679_98916750_98918496_98918619_98921579_98921682_98922307_98922388_98922494_98922697_98931281_98931366_98942987_98943076_98955093_98955199_98980160_98980366_98986864_98987019_98992384_98992472_98993488_98993627_99005124
ENSMUSG00000030074.10_0	chr6	+	7652	7	FSM	ENSMUSG00000030074.10	ENSMUST00000032157.9	7658	7	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAATACTGTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	100681695	100787869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_100682086_100710141_100710332_100727358_100727491_100760069_100760322_100764171_100764296_100775061_100775235_100781478
ENSMUSG00000030079.16_0	chr6	+	1666	11	FSM	ENSMUSG00000030079.16	ENSMUST00000032165.16	1675	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGTTTTTATATTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	88442399	88474554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88442651_88444547_88444635_88450058_88450192_88456108_88456261_88459099_88459190_88459944_88460095_88461389_88461454_88462694_88462894_88468497_88468601_88473389_88473482_88474209
ENSMUSG00000030082.15_0	chr6	-	3158	12	FSM	ENSMUSG00000030082.15	ENSMUST00000032168.7	3172	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3483	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGGAGAGCAGAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	88495878	88480565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88482276_88483126_88483204_88483722_88483915_88484153_88484352_88485543_88485705_88489083_88489238_88489477_88489588_88491294_88491427_88492325_88492405_88492485_88492552_88495352_88495421_88495667
ENSMUSG00000030083.12_0	chr6	-	1834	12	FSM	ENSMUSG00000030083.12	ENSMUST00000032169.8	1845	12	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGAGCCTGTTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	88818872	88812896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817819_88817883_88818750
ENSMUSG00000030083.12_3	chr6	-	1373	11	FSM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTCCGTGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88817911	88813229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691_88817748_88817854
ENSMUSG00000030083.12_4	chr6	-	1312	10	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	168	6	168	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTCCGTGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88817743	88813229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608_88816754_88817691
ENSMUSG00000030083.12_5	chr6	-	1261	9	ISM	ENSMUSG00000030083.12	ENST00000453791.6	1379	11	1157	6	1157	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCTTCCGTGGCCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	88816754	88813229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_88813435_88813506_88813708_88815099_88815268_88815361_88815461_88815619_88815739_88815826_88815944_88816166_88816213_88816312_88816473_88816608
ENSMUSG00000030084.12_0	chr6	-	9026	32	FSM	ENSMUSG00000030084.12	ENSMUST00000163139.8	9034	32	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTCGTGGCTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	89339596	89293297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_89296454_89297593_89297745_89297838_89298052_89299424_89299595_89299712_89299904_89300217_89300315_89300555_89300660_89301235_89301396_89301521_89301669_89306365_89306433_89306539_89306797_89307317_89307461_89308196_89308432_89308822_89308967_89309067_89309308_89309662_89309757_89309987_89310156_89311257_89311395_89311632_89311754_89311835_89311988_89312109_89312304_89312378_89312476_89314132_89314334_89317504_89317620_89318830_89318931_89319310_89319465_89319566_89319691_89319932_89320034_89320950_89321092_89331837_89332021_89333439_89334701_89339388
ENSMUSG00000030086.17_0	chr6	-	930	8	FSM	ENSMUSG00000030086.17	ENST00000290913.8	944	8	7	7	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCACCCAGTCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89572571	89360133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551476_89551573_89572440
ENSMUSG00000030086.17_1	chr6	-	1026	7	FSM	ENSMUSG00000030086.17	ENSMUST00000113550.6	1042	7	10	6	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCACCCAGTCACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	89572624	89360133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUSG00000030086.17_2	chr6	-	1104	8	FSM	ENSMUSG00000030086.17	ENSMUST00000032172.14	1121	8	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATTGGCACCCAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	89572622	89360137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_89360331_89361585_89361722_89396729_89396801_89444371_89444456_89544568_89544714_89546324_89546395_89551349_89551573_89572440
ENSMUSG00000030088.16_2	chr6	+	2465	20	FSM	ENSMUSG00000030088.16	ENST00000393431.6	2480	20	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGCCAAGACTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	90534194	90575919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUSG00000030088.16_9	chr6	+	2565	21	FSM	ENSMUSG00000030088.16	ENST00000455064.6	2580	21	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAGCCAAGACTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	90534194	90575919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_90534334_90536223_90536459_90536807_90536974_90539600_90539703_90540346_90540437_90541327_90541466_90543620_90543747_90546454_90546547_90546774_90546923_90547765_90547886_90548848_90548977_90554766_90554838_90557457_90557564_90560154_90560243_90566318_90566413_90567719_90567820_90568782_90568882_90571464_90571631_90573849_90573956_90575167_90575368_90575868
ENSMUSG00000030089.16_0	chr6	+	2404	11	FSM	ENSMUSG00000030089.16	ENSMUST00000044019.16	2412	11	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAACTCGGTGTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	90581707	90623387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_90581991_90588860_90589164_90601793_90601902_90603361_90603434_90610592_90610738_90612231_90612379_90613838_90613984_90617865_90617946_90619192_90619328_90621066_90621216_90622550
ENSMUSG00000030092.15_0	chr6	+	3552	23	FSM	ENSMUSG00000030092.15	ENST00000446702.7	3565	23	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTCAATAACGATTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	104470141	104840480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_104470234_104545918_104546055_104619857_104619985_104627350_104627527_104678122_104678219_104703033_104703238_104705226_104705330_104744669_104744855_104749512_104749650_104751428_104751559_104753262_104753414_104781279_104781408_104809458_104809635_104809987_104810106_104810743_104810903_104812664_104812815_104815715_104815787_104822616_104822852_104822985_104823102_104824978_104825166_104836339_104836453_104838764_104838934_104840087
ENSMUSG00000030092.15_23	chr6	+	3461	22	ISM	ENSMUSG00000030092.15	ENST00000446702.7	3565	23	75781	8	75709	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTCAATAACGATTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	104545917	104840480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_104546055_104619857_104619985_104627350_104627527_104678122_104678219_104703033_104703238_104705226_104705330_104744669_104744855_104749512_104749650_104751428_104751559_104753262_104753414_104781279_104781408_104809458_104809635_104809987_104810106_104810743_104810903_104812664_104812815_104815715_104815787_104822616_104822852_104822985_104823102_104824978_104825166_104836339_104836453_104838764_104838934_104840087
ENSMUSG00000030094.9_0	chr6	-	3617	16	FSM	ENSMUSG00000030094.9	ENSMUST00000032182.5	3634	16	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAAAACCCCTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	91492862	91466295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_91467249_91468202_91468293_91469252_91469347_91469823_91469994_91470086_91470222_91473069_91473152_91475011_91475173_91476246_91477120_91477903_91477994_91480982_91481104_91481552_91481711_91482372_91482458_91483820_91483942_91485470_91485578_91487438_91487641_91492687
ENSMUSG00000030095.11_0	chr6	+	2886	12	FSM	ENSMUSG00000030095.11	ENSMUST00000032183.6	2903	12	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGCCAGTCGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	91450696	91465440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91450881_91454226_91454377_91455187_91455323_91455687_91455783_91456554_91456605_91456862_91456933_91457631_91457703_91458913_91459036_91459235_91459311_91459642_91459745_91462298_91462417_91463726
ENSMUSG00000030096.9_0	chr6	+	6162	15	FSM	ENSMUSG00000030096.9	ENSMUST00000032185.9	6186	15	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1877	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCAAGAACGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91661045	91736035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91661290_91675969_91676014_91700262_91700503_91701822_91701958_91702992_91703228_91712071_91712205_91716857_91716993_91717929_91718034_91718158_91718284_91721897_91722011_91725313_91725452_91726707_91726811_91727253_91727355_91729267_91729439_91731894
ENSMUSG00000030101.16_0	chr6	-	2582	9	FSM	ENSMUSG00000030101.16	ENSMUST00000032191.16	2593	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAGACTTCACTTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108162533	108083989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_108085548_108095580_108095641_108121551_108121666_108129187_108129303_108130073_108130197_108131919_108132003_108150316_108150392_108152948_108153123_108162253
ENSMUSG00000030102.12_0	chr6	+	9854	62	FSM	ENSMUSG00000030102.12	ENSMUST00000032192.9	9870	62	8	8	8	-8	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCCTATGCAGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	108190064	108528062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108345971_108346127_108353722_108353823_108354645_108354807_108355122_108355265_108357876_108358036_108358148_108358322_108359065_108359186_108360581_108360777_108363580_108363833_108364324_108364467_108365145_108365300_108366327_108366516_108368791_108368931_108369491_108369547_108370865_108371032_108371195_108371367_108371795_108371862_108372936_108373075_108376210_108376337_108378273_108378475_108380232_108380485_108382360_108382487_108383050_108383180_108387769_108387891_108390729_108390915_108393770_108393920_108394849_108394962_108400293_108400327_108408421_108408458_108409606_108409658_108415260_108415394_108417457_108417649_108447983_108448165_108450367_108450622_108458183_108458385_108459857_108459969_108462203_108462300_108465446_108465570_108466775_108466881_108470661_108470855_108476068_108476192_108482837_108483014_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ENSMUSG00000030102.12_10	chr6	+	2799	20	FSM	ENSMUSG00000030102.12	ENST00000544951.6	2799	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCAAAATTATATTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	108190258	108527285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_108190315_108191163_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ENSMUSG00000030102.12_11	chr6	+	2734	19	ISM	ENSMUSG00000030102.12	ENST00000544951.6	2799	20	914	0	914	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCAAAATTATATTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	108191172	108527285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_108191240_108213938_108214047_108218224_108218296_108316467_108316584_108326558_108326646_108328953_108329113_108331567_108331667_108333160_108333245_108333351_108333499_108340570_108340667_108342259_108342305_108487655_108487821_108492718_108492915_108494486_108494580_108495650_108495791_108496245_108496412_108500248_108500410_108518863_108519026_108526713
ENSMUSG00000030103.12_0	chr6	+	3096	5	FSM	ENSMUSG00000030103.12	ENSMUST00000032194.11	3113	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATAATAGGTAAATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	108637597	108643877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_108637954_108638121_108638192_108638465_108638574_108639481_108639606_108641439
ENSMUSG00000030104.10_0	chr6	+	5803	12	FSM	ENSMUSG00000030104.10	ENSMUST00000089162.5	5817	12	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTCACTGTGTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	108805648	108836309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_108806195_108813700_108813774_108818560_108818665_108819887_108820060_108821787_108821972_108823632_108823808_108825670_108825792_108826355_108826527_108828170_108828245_108829450_108829548_108831205_108831410_108832427
ENSMUSG00000030105.9_0	chr6	+	4429	7	FSM	ENSMUSG00000030105.9	ENSMUST00000032196.9	4443	7	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGATGCCTCCTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	108760072	108802238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_108760339_108790587_108790669_108791944_108792019_108792218_108792313_108795205_108795274_108795503_108795575_108798463
ENSMUSG00000030108.15_0	chr6	+	1568	12	FSM	ENSMUSG00000030108.15	ENST00000445055.6	1580	12	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTATAGAGGCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121279665	121314415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_121279863_121301223_121301309_121301982_121302116_121303070_121303206_121309321_121309426_121310277_121310403_121311405_121311519_121311797_121311936_121312578_121312682_121312998_121313100_121313773_121313945_121314252
ENSMUSG00000030110.14_0	chr6	-	6334	17	FSM	ENSMUSG00000030110.14	ENST00000615310.5	6350	17	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCCATTAAACCATACC	NA	NA	NA	NA	NA	NA	NA	NA	118174189	118128806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118157178_118157424_118158785_118159074_118161137_118161402_118174021
ENSMUSG00000030110.14_4	chr6	-	4002	19	FSM	ENSMUSG00000030110.14	ENST00000340058.6	4019	19	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTCTGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	118174185	118131533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118132397_118140148_118140249_118141683_118141822_118142870_118142942_118144856_118144980_118145082_118145298_118146082_118146191_118146793_118146942_118150375_118150630_118151197_118151318_118151967_118152079_118152683_118152792_118153114_118153398_118155425_118155629_118156232_118156429_118157178_118157424_118158785_118159074_118161137_118161402_118174021
ENSMUSG00000030116.15_0	chr6	+	1485	10	FSM	ENSMUSG00000030116.15	ENSMUST00000148517.8	1506	10	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGCAAAAAGAAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	122490550	122506237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122490692_122491299_122491360_122492306_122492343_122497537_122497571_122497854_122497888_122498851_122498888_122501445_122501470_122502909_122502998_122503745_122503820_122505277
ENSMUSG00000030120.15_0	chr6	+	1451	9	FSM	ENSMUSG00000030120.15	ENSMUST00000180095.4	1475	9	10	14	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	3561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATGGAAAAAAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	124908404	124913094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912585
ENSMUSG00000030120.15_4	chr6	+	1425	9	FSM	ENSMUSG00000030120.15	ENSMUST00000032214.14	1451	9	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATGGAAAAAAGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	124908451	124913094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124908550_124909061_124909140_124909373_124909501_124909739_124909776_124910916_124910971_124911253_124911383_124911548_124911709_124912195_124912409_124912564
ENSMUSG00000030122.13_0	chr6	-	1138	5	FSM	ENSMUSG00000030122.13	ENSMUST00000032216.7	1149	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCGTCTCCTGCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124894900	124890645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124891196_124891370_124891430_124891597_124891677_124891880_124891953_124894522
ENSMUSG00000030123.16_0	chr6	-	6887	36	FSM	ENSMUSG00000030123.16	ENSMUST00000015511.15	6907	36	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTACTATGGGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115971954	115931779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115932818_115932965_115933041_115933555_115933697_115934486_115934635_115935487_115935652_115935949_115936055_115936270_115936306_115936737_115936802_115936878_115936983_115937386_115937544_115937676_115937824_115939301_115939501_115939655_115939787_115940191_115940297_115940851_115940965_115941036_115941145_115942817_115942933_115943454_115943605_115943697_115943956_115944145_115944237_115944317_115944486_115944709_115944850_115944931_115945032_115945628_115945781_115946268_115946424_115946836_115946931_115947119_115947210_115949432_115949538_115952911_115953015_115953330_115953440_115953530_115953709_115954903_115955034_115955118_115955220_115955439_115955572_115957538_115957716_115970449
ENSMUSG00000030126.18_0	chr6	-	5828	6	FSM	ENSMUSG00000030126.18	ENSMUST00000088896.10	5838	6	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGACTCAGCTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116170443	115995577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116110727_116111419_116115155_116115212_116170218
ENSMUSG00000030126.18_2	chr6	-	2841	4	FSM	ENSMUSG00000030126.18	ENSMUST00000204353.3	2851	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAGCCGTGTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	116084810	115998130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115999363_116001762_116001899_116019831_116020767_116084272
ENSMUSG00000030127.16_0	chr6	-	1318	8	FSM	ENSMUSG00000030127.16	ENSMUST00000112439.9	1328	8	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTATGTATGCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	124942494	124935378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124935736_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_17	chr6	-	1539	7	FSM	ENSMUSG00000030127.16	ENST00000538410.5	1553	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATTGACACATGACA	NA	NA	NA	NA	NA	NA	NA	NA	124942429	124935833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124936601_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ENSMUSG00000030127.16_22	chr6	-	1649	8	FSM	ENSMUSG00000030127.16	ENST00000229251.7	1671	8	3	19	3	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAAAATATATATG	NA	NA	NA	NA	NA	NA	NA	NA	124942444	124935862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942364
ENSMUSG00000030127.16_4	chr6	-	1793	8	FSM	ENSMUSG00000030127.16	ENSMUST00000032220.15	1817	8	13	11	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAAAAATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	124942398	124935789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942247
ENSMUSG00000030127.16_5	chr6	-	1768	8	FSM	ENSMUSG00000030127.16	ENST00000543155.6	1784	8	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAAAAATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	124942462	124935789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124939584_124939661_124941686_124941892_124942336
ENSMUSG00000030127.16_6	chr6	-	1692	7	FSM	ENSMUSG00000030127.16	ENST00000626119.2	1715	7	14	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACAAAAATGCCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	124942490	124935789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124936601_124936761_124936914_124937053_124937160_124938120_124938324_124939320_124939410_124941686_124941892_124942364
ENSMUSG00000030138.9_0	chr6	-	4325	23	FSM	ENSMUSG00000030138.9	ENSMUST00000032237.8	4345	23	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTTGGCCTAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	118396420	118360346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118360837_118361199_118361362_118365716_118365893_118366199_118366348_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723_118373798_118375034_118375117_118380049_118380208_118381216_118381319_118381540_118382302_118384971_118385112_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348_118394540_118395369_118395579_118396248
ENSMUSG00000030138.9_14	chr6	-	1042	6	FSM	ENSMUSG00000030138.9	ENST00000651585.1	1059	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTATAGTTTTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	118373232	118365547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118365893_118368118_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087
ENSMUSG00000030138.9_21	chr6	-	1162	8	FSM	ENSMUSG00000030138.9	ENST00000556075.2	1171	8	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGTAAAGGTCACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118373794	118365721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118365893_118366199_118366348_118368078_118368242_118369278_118369338_118369504_118369686_118369763_118369953_118373087_118373268_118373723
ENSMUSG00000030138.9_34	chr6	-	1110	8	FSM	ENSMUSG00000030138.9	ENST00000374336.5	1127	8	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATACAGAAGATGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	118394528	118382229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118382302_118384971_118385102_118388442_118388637_118388915_118389038_118390039_118390183_118390691_118390881_118393423_118393504_118394348
ENSMUSG00000030138.9_36	chr6	-	456	4	FSM	ENSMUSG00000030138.9	ENST00000444180.3	471	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTATCGTCTGCTCTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118394461	118388917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118389038_118390039_118390183_118393423_118393504_118394348
ENSMUSG00000030142.11_0	chr6	-	2507	6	FSM	ENSMUSG00000030142.11	ENSMUST00000032239.11	2518	6	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTATTCATATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	123266829	123258758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_123260656_123262427_123262544_123263166_123263319_123263390_123263478_123265852_123265949_123266670
ENSMUSG00000030145.15_0	chr6	-	3678	6	FSM	ENSMUSG00000030145.15	ENSMUST00000069292.14	3683	6	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCATTGTGTTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	118432486	118404281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118407356_118409817_118409908_118410265_118410393_118430806_118430849_118431637_118431873_118432376
ENSMUSG00000030156.6_0	chr6	-	1667	5	FSM	ENSMUSG00000030156.6	ENSMUST00000032259.6	1687	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTTTCCAGCGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	129252386	129244294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_129245333_129246538_129246643_129246951_129247152_129248297_129248421_129252184
ENSMUSG00000030161.9_0	chr6	+	1801	4	FSM	ENSMUSG00000030161.9	ENSMUST00000032264.9	1820	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAATTGTGGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	129510133	129519301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_129510500_129514453_129514533_129515532_129515652_129518064
ENSMUSG00000030166.15_0	chr6	+	1680	12	FSM	ENSMUSG00000030166.15	ENSMUST00000162461.7	1693	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATCTTTCCTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	119879670	119899778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_119879797_119888008_119888103_119889962_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892927_119893004_119895547_119895748_119895886_119896039_119897070_119897152_119897767_119897990_119899432
ENSMUSG00000030166.15_4	chr6	+	546	5	FSM	ENSMUSG00000030166.15	ENST00000545564.5	563	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAATAAGCTTCCACGAC	NA	NA	NA	NA	NA	NA	NA	NA	119889971	119892981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_119890065_119890859_119890954_119891130_119891199_119892194_119892314_119892809
ENSMUSG00000030168.14_0	chr6	-	4165	8	FSM	ENSMUSG00000030168.14	ENSMUST00000032272.13	4184	8	6	13	6	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAAATGAGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119394659	119330123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119394380
ENSMUSG00000030168.14_1	chr6	-	3461	8	FSM	ENSMUSG00000030168.14	ENSMUST00000169744.8	3489	8	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAACAGCACATATCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	119365628	119330734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119332890_119334176_119334371_119335882_119336071_119336311_119336499_119338788_119338961_119342221_119342342_119347110_119347370_119365442
ENSMUSG00000030172.16_0	chr6	-	8743	21	FSM	ENSMUSG00000030172.16	ENSMUST00000183703.8	8760	21	9	8	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTGTGTGCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	119825102	119547764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119711041_119711054_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ENSMUSG00000030172.16_11	chr6	-	8345	19	FSM	ENSMUSG00000030172.16	ENSMUST00000032279.12	8356	19	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAAACTGTGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119802180	119547768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119711041_119711054_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346
ENSMUSG00000030172.16_13	chr6	-	5403	18	ISM	ENSMUSG00000030172.16	ENSMUST00000184864.8	5428	19	22850	0	17	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTCTGTGAGGGATC	NA	NA	NA	NA	NA	NA	NA	NA	119802170	119550688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346
ENSMUSG00000030172.16_3	chr6	-	8732	20	NIC	ENSMUSG00000030172.16	novel	8760	21	NA	NA	7	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAACTGTGTGCTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	119825104	119547765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_-_119552724_119571745_119571935_119597271_119597371_119607563_119607709_119671531_119671693_119690640_119690773_119699133_119699270_119720248_119720443_119726798_119726940_119728160_119728302_119730219_119730358_119738104_119738273_119750694_119750863_119754948_119755033_119756437_119756594_119760349_119760425_119773867_119774285_119801346_119802171_119802641_119802781_119824837
ENSMUSG00000030177.15_0	chr6	-	2597	12	FSM	ENSMUSG00000030177.15	ENSMUST00000032283.12	2610	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATCTCAGGGCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	120334383	120301289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327406_120330961_120331016_120334287
ENSMUSG00000030177.15_4	chr6	-	1848	12	FSM	ENSMUSG00000030177.15	ENSMUST00000112703.8	1887	12	9	30	9	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAACAAACAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120334424	120302025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120302455_120306054_120306208_120306294_120306421_120308772_120308993_120311729_120311879_120315029_120315122_120316095_120316160_120318933_120319031_120325348_120325492_120327167_120327352_120330961_120331016_120334287
ENSMUSG00000030180.16_0	chr6	+	10925	28	FSM	ENSMUSG00000030180.16	ENSMUST00000005108.10	10944	28	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGGGCCAAAGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	120341096	120421528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_120341740_120343530_120343609_120345892_120346016_120351777_120351949_120358495_120358631_120359877_120359984_120362582_120362675_120364970_120365130_120365890_120366011_120366513_120366673_120367614_120367797_120371047_120371211_120375898_120376019_120379466_120379662_120381925_120382108_120382820_120382946_120383535_120383687_120385205_120385321_120389115_120389472_120392176_120392316_120395519_120395700_120396360_120396523_120403774_120404327_120404689_120404834_120405178_120405339_120407020_120407242_120408773_120409185_120415947
ENSMUSG00000030188.13_0	chr6	-	748	5	FSM	ENSMUSG00000030188.13	ENSMUST00000032307.12	767	5	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAAGCCTAGATGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	131270199	131261361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131270034
ENSMUSG00000030188.13_7	chr6	-	879	5	FSM	ENSMUSG00000030188.13	ENSMUST00000173837.6	897	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTATATATTTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	131269213	131261575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131261692_131262605_131262689_131264998_131265110_131266351_131266411_131268703
ENSMUSG00000030189.16_0	chr6	-	1670	9	FSM	ENSMUSG00000030189.16	ENSMUST00000087865.4	1684	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	131365433	131341825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUSG00000030189.16_1	chr6	-	1837	10	FSM	ENSMUSG00000030189.16	ENSMUST00000032309.13	1853	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGGCTGTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	131365393	131341825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131342369_131344727_131344827_131345351_131345524_131347285_131347378_131352936_131353144_131356320_131356444_131357838_131357929_131360463_131360498_131361465_131361530_131364980
ENSMUSG00000030199.17_0	chr6	+	5528	8	FSM	ENSMUSG00000030199.17	ENSMUST00000081028.13	5545	8	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	134012667	134247106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134013102_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ENSMUSG00000030199.17_1	chr6	+	5686	9	FSM	ENSMUSG00000030199.17	ENSMUST00000111963.8	5707	9	6	15	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	134012668	134247106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134013102_134043269_134043429_134114247_134114381_134199827_134199993_134210481_134210617_134225236_134225768_134238652_134238796_134239981_134240083_134243220
ENSMUSG00000030201.16_0	chr6	-	9328	23	FSM	ENSMUSG00000030201.16	ENSMUST00000032322.15	9368	23	23	17	23	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGGAAAAAATGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	134543853	134423455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134428044_134430512_134430611_134431659_134431797_134433017_134433249_134434620_134434732_134436194_134436432_134439498_134439625_134441357_134441568_134444471_134444663_134445605_134445818_134447651_134447855_134456471_134456799_134457338_134457524_134461176_134461404_134462606_134462897_134463417_134463635_134483158_134483331_134484248_134484646_134488118_134488251_134490185_134490383_134497358_134497557_134518614_134519009_134543605
ENSMUSG00000030203.18_0	chr6	-	3978	7	FSM	ENSMUSG00000030203.18	ENSMUST00000129433.4	3993	7	9	6	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTAAGTGTGAGACGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	134769429	134692436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134695049_134697456_134697581_134702798_134702959_134716774_134716939_134735581_134735721_134737808_134738398_134769239
ENSMUSG00000030203.18_3	chr6	-	2874	5	FSM	ENSMUSG00000030203.18	ENST00000228862.3	2884	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCCATGTAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	134738383	134694138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134696015_134697456_134697581_134702798_134702959_134735581_134735721_134737808
ENSMUSG00000030204.11_0	chr6	+	1751	12	FSM	ENSMUSG00000030204.11	ENSMUST00000032326.11	1764	12	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGTGTCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	134988582	135000734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134988692_134989264_134989359_134992157_134992347_134992538_134992611_134992784_134992904_134993544_134993617_134994083_134994201_134995013_134995161_134995936_134996075_134997578_134997650_134998411_134998542_135000241
ENSMUSG00000030206.14_0	chr6	-	1148	6	FSM	ENSMUSG00000030206.14	ENST00000337630.10	1160	6	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGATAAGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	135224900	135214296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078_135221398_135224831
ENSMUSG00000030206.14_1	chr6	-	1078	5	ISM	ENSMUSG00000030206.14	ENST00000337630.10	1160	6	3507	9	3507	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAAGATAAGAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	135221396	135214296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_135214744_135217070_135217183_135218242_135218396_135219171_135219220_135221078
ENSMUSG00000030207.16_0	chr6	+	4181	13	FSM	ENSMUSG00000030207.16	ENSMUST00000111915.8	4221	13	29	11	29	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGAATATACACGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	135175003	135213229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135175100_135186030_135186430_135188832_135188932_135193883_135194076_135195676_135195808_135202137_135202286_135202653_135202796_135203847_135203992_135204150_135204233_135205410_135205567_135208618_135208737_135210253_135210475_135210976
ENSMUSG00000030208.16_0	chr6	+	2895	6	FSM	ENSMUSG00000030208.16	ENSMUST00000205156.3	2911	6	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135339557	135360170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135339706_135339901_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_1	chr6	+	2710	5	FSM	ENSMUSG00000030208.16	ENSMUST00000032330.16	2721	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTGTGACTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	135339938	135360170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135340101_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_2	chr6	+	677	4	FSM	ENSMUSG00000030208.16	ENST00000544053.5	691	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACCCATCCTTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	135339961	135358324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135340101_135356898_135356996_135357098_135357170_135357954
ENSMUSG00000030208.16_3	chr6	+	2748	5	FSM	ENSMUSG00000030208.16	ENSMUST00000111907.2	2763	5	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTGTGTGACTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	135344503	135360169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135344705_135354175_135354287_135356898_135356996_135357098_135357240_135357971
ENSMUSG00000030208.16_4	chr6	+	357	2	FSM	ENSMUSG00000030208.16	ENST00000396301.7	368	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAGAGGGAAGGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	135357107	135358251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135357261_135358047
ENSMUSG00000030213.13_0	chr6	+	8040	15	FSM	ENSMUSG00000030213.13	ENSMUST00000032335.13	8059	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGACTCATTCCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	136495811	136587853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_136495962_136536761_136538438_136540757_136540836_136542014_136542161_136543645_136543784_136548470_136548537_136552242_136552317_136559375_136559465_136564042_136564682_136570073_136570145_136573432_136573512_136576647_136576804_136580282_136580466_136582379_136582493_136583471
ENSMUSG00000030216.13_0	chr6	-	2717	12	FSM	ENSMUSG00000030216.13	ENSMUST00000116514.4	2739	12	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAGATACCTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136805220	136790662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_136791640_136793048_136793232_136793941_136794236_136794927_136795030_136797504_136797697_136798174_136798375_136798526_136798661_136799791_136799989_136801327_136801422_136802513_136802546_136802998_136803108_136805017
ENSMUSG00000030218.3_0	chr6	-	600	4	FSM	ENSMUSG00000030218.3	ENSMUST00000032342.3	617	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTTCACTTTGTGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	136852811	136849439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_136849787_136850164_136850241_136851264_136851298_136852667
ENSMUSG00000030220.14_0	chr6	-	1141	6	FSM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCCCACATTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	136918499	136900662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918435
ENSMUSG00000030220.14_1	chr6	-	1175	6	FSM	ENSMUSG00000030220.14	ENSMUST00000032344.12	1193	6	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCCCACATTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	136918746	136900662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581_136910772_136918648
ENSMUSG00000030220.14_2	chr6	-	1077	5	ISM	ENSMUSG00000030220.14	ENSMUST00000111892.8	1153	6	7730	10	7730	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCCCACATTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	136910771	136900662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_136901325_136903669_136903734_136906609_136906687_136909257_136909342_136910581
ENSMUSG00000030222.14_0	chr6	-	2248	5	FSM	ENSMUSG00000030222.14	ENSMUST00000117919.8	2262	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTCAAATTCTGTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	137146723	137031835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_137033539_137034810_137034885_137043996_137044054_137141932_137142101_137146477
ENSMUSG00000030224.11_0	chr6	+	2632	10	FSM	ENSMUSG00000030224.11	ENSMUST00000064910.7	2650	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAAGTCGCTTGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	137712086	137728923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_137712465_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030224.11_9	chr6	+	1181	10	FSM	ENSMUSG00000030224.11	ENST00000025399.10	1196	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCAGACGTGTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	137712266	137727609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_137712508_137713327_137713464_137716355_137716438_137716752_137716826_137718300_137718398_137718949_137719088_137722504_137722642_137725684_137725835_137726361_137726428_137727548
ENSMUSG00000030225.12_0	chr6	+	1723	9	FSM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	137731558	137814889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_137731637_137755121_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030225.12_1	chr6	+	1646	8	ISM	ENSMUSG00000030225.12	ENSMUST00000087675.9	1729	9	23565	3	23547	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	137755120	137814889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_137755220_137756507_137756656_137757727_137757824_137759926_137760062_137773751_137773881_137807190_137807304_137813731_137813882_137814113
ENSMUSG00000030226.13_1	chr6	-	1520	5	FSM	ENSMUSG00000030226.13	ENST00000540848.5	1527	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCTTTGTGTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	138404093	138341969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_138343046_138354197_138354324_138393412_138393627_138399438_138399505_138404055
ENSMUSG00000030226.13_2	chr6	-	1474	4	FSM	ENSMUSG00000030226.13	ENSMUST00000163024.8	1331	4	474	-617	417	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGAGGGCTTTGTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	138399498	138341971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_138343046_138354197_138354324_138393412_138393627_138399438
ENSMUSG00000030226.13_3	chr6	-	1418	3	ISM	ENSMUSG00000030226.13	ENSMUST00000163065.8	2425	4	4822	776	4822	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGGCTTTGTGTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	138393628	138341969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_138343046_138354197_138354324_138393412
ENSMUSG00000030228.20_0	chr6	+	3627	28	NIC	ENSMUSG00000030228.20	novel	3640	28	NA	NA	7	-6	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTCCTGGGAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	139606738	139913750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_139606874_139610674_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431_139903558_139913516
ENSMUSG00000030228.20_7	chr6	+	3747	29	NIC	ENSMUSG00000030228.20	novel	3763	29	NA	NA	10	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTCTCCTGGGAGATAG	NA	NA	NA	NA	NA	NA	NA	NA	139606741	139913750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_139606874_139610674_139610790_139626126_139626230_139634158_139634230_139647720_139647900_139661586_139661621_139665714_139665911_139676087_139676211_139682619_139682752_139689031_139689147_139693824_139693956_139700442_139700632_139714415_139714510_139718134_139718230_139789613_139789795_139793287_139793396_139798515_139798609_139800993_139801124_139805090_139805228_139805938_139806109_139821028_139821186_139827691_139827802_139841791_139841982_139842453_139842576_139846001_139846111_139863702_139863779_139881707_139881803_139903431_139903558_139913516
ENSMUSG00000030231.12_0	chr6	+	7370	31	FSM	ENSMUSG00000030231.12	ENSMUST00000087622.6	7382	31	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACTGGTGTTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	140369788	140542833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_140369983_140370102_140370183_140372223_140372282_140470590_140470675_140471564_140471686_140472182_140472288_140474286_140474360_140480187_140480289_140482373_140482490_140482731_140482750_140489445_140489914_140496486_140496950_140498440_140498525_140501676_140501797_140502529_140502584_140509293_140509375_140514571_140514608_140515078_140515142_140515831_140515913_140516046_140516197_140518590_140518693_140522952_140523065_140525155_140525203_140526072_140526262_140527693_140527815_140529558_140529675_140532034_140532227_140534900_140535042_140535371_140535482_140537353_140537491_140539280
ENSMUSG00000030232.19_0	chr6	+	5901	8	FSM	ENSMUSG00000030232.19	ENSMUST00000032359.15	5932	8	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATTTATATTCTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	140568410	140601198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_140568785_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481
ENSMUSG00000030232.19_2	chr6	+	1391	9	FSM	ENSMUSG00000030232.19	ENSMUST00000160836.8	1393	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAAGAAGCCATATGGA	NA	NA	NA	NA	NA	NA	NA	NA	140570636	140597470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_140570762_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ENSMUSG00000030232.19_4	chr6	+	2492	9	FSM	ENSMUSG00000030232.19	ENSMUST00000161335.8	2524	9	20	12	20	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATACTTAGCTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	140572627	140598540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_140572784_140579414_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593812_140596481_140596509_140597041
ENSMUSG00000030232.19_6	chr6	+	820	7	FSM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGGTAAAACATTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	140579438	140596503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697_140593824_140596481
ENSMUSG00000030232.19_7	chr6	+	793	6	ISM	ENSMUSG00000030232.19	ENST00000673824.1	834	7	13	2686	13	-2686	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAATATACTTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	140579443	140593823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_140579623_140583385_140583494_140587897_140588085_140589673_140589799_140592535_140592604_140593697
ENSMUSG00000030235.18_0	chr6	+	2619	15	FSM	ENSMUSG00000030235.18	ENST00000266509.7	2642	15	13	10	13	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTAAAAAAAAATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	141470005	141515247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_141470469_141477179_141477333_141478367_141478510_141484905_141485043_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513298_141515031
ENSMUSG00000030235.18_15	chr6	+	2452	16	FSM	ENSMUSG00000030235.18	ENST00000545604.5	2471	16	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTAAAAAAAAATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	141470151	141515247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_141470276_141470397_141470469_141477179_141477333_141478367_141478510_141484905_141485043_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513399_141515031
ENSMUSG00000030235.18_31	chr6	+	1959	12	FSM	ENSMUSG00000030235.18	ENST00000545102.1	1974	12	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTTAAAAAAAAATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	141484908	141515247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_141485043_141485788_141485910_141487817_141487965_141490458_141490558_141492402_141492649_141493495_141493661_141500717_141500914_141505466_141505633_141508751_141508937_141510240_141510306_141513179_141513399_141515031
ENSMUSG00000030243.17_3	chr6	-	2086	15	ISM	ENSMUSG00000030243.17	ENSMUST00000032370.13	2112	16	2459	12	2459	-12	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAACATTAGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	142330303	142296079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_142296272_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
ENSMUSG00000030243.17_5	chr6	-	3052	16	FSM	ENSMUSG00000030243.17	ENSMUST00000100832.10	3054	16	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGAATGATGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	142332800	142302674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_142303781_142308531_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUSG00000030243.17_7	chr6	-	3387	15	FSM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAGGAGACCTATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	142332811	142307101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254_142330303_142332747
ENSMUSG00000030243.17_8	chr6	-	3312	14	ISM	ENSMUSG00000030243.17	ENSMUST00000111803.9	3389	15	2515	7	2464	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGAAAGAGGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	142330298	142307108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_142308596_142309272_142309403_142310161_142310382_142311241_142311334_142312392_142312532_142312999_142313118_142313206_142313356_142314198_142314281_142315016_142315184_142318541_142318741_142320545_142320653_142322506_142322687_142323878_142324077_142330254
ENSMUSG00000030245.11_0	chr6	+	2802	5	FSM	ENSMUSG00000030245.11	ENSMUST00000032372.7	2818	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4975	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTGGTGGTCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	142332957	142349579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_142333096_142338055_142338148_142339653_142339833_142341913_142341996_142347268
ENSMUSG00000030246.13_0	chr6	-	1284	8	FSM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTCTGCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	142453669	142435980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137_142451273_142453578
ENSMUSG00000030246.13_1	chr6	-	1194	7	ISM	ENSMUSG00000030246.13	ENSMUST00000239397.2	1287	8	2396	3	2396	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTCTGCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	142451273	142435980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_142436331_142438218_142438343_142439825_142439944_142441293_142441468_142444230_142444405_142447065_142447184_142451137
ENSMUSG00000030247.10_0	chr6	-	2528	3	FSM	ENSMUSG00000030247.10	ENSMUST00000203945.3	2548	3	12	8	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTACTATTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	142517328	142510570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_142512232_142515731_142516180_142516909
ENSMUSG00000030254.17_0	chr6	-	2567	12	FSM	ENSMUSG00000030254.17	ENSMUST00000077088.11	2577	12	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTACCTGCCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	112673642	112596815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_112597866_112621548_112621709_112626555_112626799_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUSG00000030254.17_2	chr6	-	2567	14	FSM	ENSMUSG00000030254.17	ENSMUST00000068487.12	2577	14	3	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAATGAATATGCAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	112673628	112596942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_112597866_112605422_112605486_112621548_112621709_112626555_112626799_112641056_112641135_112642238_112642300_112649084_112649162_112652706_112652892_112656877_112656978_112658299_112658638_112663676_112663748_112664937_112665000_112670429_112670512_112673504
ENSMUSG00000030254.17_3	chr6	-	504	4	FSM	ENSMUSG00000030254.17	ENST00000418463.5	525	4	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGAGACAAGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	112673617	112658399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_112658638_112663676_112663748_112670429_112670512_112673504
ENSMUSG00000030255.14_0	chr6	+	4402	4	FSM	ENSMUSG00000030255.14	ENSMUST00000111702.8	4415	4	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTCACAAAGACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	145877367	145910937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145877464_145877598_145877736_145901320_145901408_145906855
ENSMUSG00000030255.14_2	chr6	+	4407	3	FSM	ENSMUSG00000030255.14	ENSMUST00000032383.14	4431	3	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTCACAAAGACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	145879859	145910937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145880098_145901320_145901408_145906855
ENSMUSG00000030256.12_0	chr6	-	6115	5	FSM	ENSMUSG00000030256.12	ENSMUST00000032386.11	6133	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAGACATTGGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	145811272	145803974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_145809465_145809856_145809969_145810301_145810410_145810722_145810787_145810931
ENSMUSG00000030257.17_2	chr6	-	2477	19	FSM	ENSMUSG00000030257.17	ENST00000618999.4	2493	19	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAAGGTGAGTAGCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	112806589	112712800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_112712875_112715843_112716072_112716279_112716386_112718213_112718457_112723852_112723931_112726322_112726384_112727341_112727373_112731531_112731635_112736709_112736738_112743828_112743914_112745295_112745483_112748327_112748526_112750558_112750661_112752459_112752682_112753980_112754110_112757833_112758020_112772733_112772797_112793551_112793715_112806399
ENSMUSG00000030259.13_0	chr6	+	5436	5	FSM	ENSMUSG00000030259.13	ENSMUST00000111704.8	5446	5	5	5	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATACAATTGTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	145692478	145766800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145692693_145754109_145754289_145760778_145761669_145762223_145762369_145762792
ENSMUSG00000030264.15_0	chr6	+	2150	10	FSM	ENSMUSG00000030264.15	ENSMUST00000032398.15	2163	10	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTATGGAAGCGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	113023197	113045233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113023352_113024375_113024666_113026299_113026378_113032599_113033077_113036915_113037047_113040061_113040132_113042504_113042621_113043716_113043828_113044228_113044353_113044634
ENSMUSG00000030265.15_0	chr6	-	4665	5	FSM	ENSMUSG00000030265.15	ENSMUST00000032399.12	4678	5	5	8	-3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAGTGTGTAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	145195960	145162432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420_145192543_145195774
ENSMUSG00000030265.15_5	chr6	-	540	4	ISM	ENSMUSG00000030265.15	ENST00000407852.2	565	5	11	3940	11	-379	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTACAGTTATGTGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	145192520	145166349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_145166451_145177820_145177981_145179973_145180153_145192420
ENSMUSG00000030265.15_8	chr6	-	536	3	FSM	ENSMUSG00000030265.15	ENST00000556131.1	554	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGCCTCATTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	145195947	145184650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_145184904_145192420_145192543_145195786
ENSMUSG00000030268.18_11	chr6	-	836	6	FSM	ENSMUSG00000030268.18	ENST00000539780.5	854	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGGGCCAGGTAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	144985353	144953352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144985160
ENSMUSG00000030268.18_2	chr6	-	2541	11	FSM	ENSMUSG00000030268.18	ENSMUST00000111742.8	2556	11	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAAACTCTGGATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	145021897	144944885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_144946031_144950076_144950152_144953341_144953483_144955775_144955862_144961174_144961318_144964917_144965082_144978508_144978629_144980266_144980378_144985160_144985362_144993017_144993090_145021614
ENSMUSG00000030269.15_0	chr6	+	2332	18	FSM	ENSMUSG00000030269.15	ENST00000353332.9	2346	18	11	3	-6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113214795	113258157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113257563
ENSMUSG00000030269.15_13	chr6	+	355	5	FSM	ENSMUSG00000030269.15	ENST00000584299.1	365	5	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTCCTGTCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	113232813	113246517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113232900_113233983_113234058_113237548_113237620_113238166_113238235_113246461
ENSMUSG00000030269.15_4	chr6	+	1399	9	FSM	ENSMUSG00000030269.15	ENST00000420925.5	1410	9	9	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTTTCATTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	113214810	113258157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113215083_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113257563
ENSMUSG00000030269.15_6	chr6	+	2657	19	FSM	ENSMUSG00000030269.15	ENSMUST00000113146.9	2676	19	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGTCAAATTCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	113214814	113258345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113215083_113217245_113217395_113226831_113226941_113230691_113230768_113231050_113231112_113232776_113232900_113233983_113234058_113237548_113237620_113238166_113238242_113242404_113242472_113242930_113243017_113243220_113243298_113243519_113243557_113245588_113245657_113246461_113246521_113246692_113246832_113247482_113247663_113254750_113254907_113257563
ENSMUSG00000030271.15_0	chr6	+	1535	7	FSM	ENSMUSG00000030271.15	ENSMUST00000032406.15	1549	7	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAACGCAGTGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	113303938	113311141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113304324_113305325_113305574_113306189_113306370_113308731_113308914_113310302_113310454_113310591_113310642_113310802
ENSMUSG00000030271.15_2	chr6	+	742	4	FSM	ENSMUSG00000030271.15	ENST00000349503.9	757	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCCGTAGTCATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	113305333	113317442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113305574_113306189_113306370_113308731_113308914_113317302
ENSMUSG00000030271.15_3	chr6	+	561	3	FSM	ENSMUSG00000030271.15	ENST00000383826.9	575	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCCGTAGTCATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	113305332	113317442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113305574_113306189_113306370_113317302
ENSMUSG00000030272.16_0	chr6	-	1466	12	FSM	ENSMUSG00000030272.16	ENSMUST00000032409.15	1496	12	14	16	14	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATAAAACAAGACAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	113320931	113311100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113311370_113311474_113311593_113313134_113313223_113313318_113313398_113314153_113314267_113315071_113315148_113315240_113315368_113316245_113316385_113316467_113316543_113317252_113317385_113318828_113318944_113320796
ENSMUSG00000030275.7_0	chr6	+	1783	8	FSM	ENSMUSG00000030275.7	ENSMUST00000204947.3	1791	8	6	2	-3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGGCATTTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	143112952	143164221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143163322_143163467_143163781
ENSMUSG00000030275.7_1	chr6	+	6411	8	FSM	ENSMUSG00000030275.7	ENSMUST00000032413.7	6433	8	14	8	-10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATAATGTGTCCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	143112969	143154264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143148804_143148879_143149109
ENSMUSG00000030275.7_4	chr6	+	2616	7	FSM	ENSMUSG00000030275.7	ENSMUST00000205256.2	2647	7	24	7	24	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGCCAAAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	143113003	143178026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_143113363_143126312_143126573_143130298_143130440_143132217_143132361_143140957_143141042_143143130_143143292_143176558
ENSMUSG00000030278.12_1	chr6	-	280	2	FSM	ENSMUSG00000030278.12	ENST00000505910.1	304	2	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACCTGCACTGCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	113405471	113405118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113405260_113405332
ENSMUSG00000030279.16_1	chr6	-	3330	26	FSM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	7	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCATGGATTCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	143045505	142957541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324_143036412_143045403
ENSMUSG00000030279.16_2	chr6	-	3228	25	ISM	ENSMUSG00000030279.16	ENST00000396028.6	3343	26	9099	8	9080	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCCCATGGATTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	143036413	142957543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_142957863_142958927_142959075_142963608_142963800_142965053_142965156_142966049_142966101_142974885_142974973_142975298_142975387_142975847_142975938_142976503_142976603_142976970_142977033_142977287_142977352_142980747_142980889_142981960_142982126_142984548_142984736_142987077_142987270_142992768_142992865_142995850_142995966_143007478_143007588_143012781_143012868_143019388_143019514_143023988_143024188_143025594_143025751_143027058_143027155_143028888_143029061_143036324
ENSMUSG00000030281.17_0	chr6	+	2280	17	FSM	ENSMUSG00000030281.17	ENSMUST00000058300.14	2302	17	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCTAACCAAGTAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	113448401	113460093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113448749_113449031_113449054_113449191_113449345_113449587_113449651_113449738_113449849_113451121_113451234_113453386_113453500_113453695_113453756_113455824_113455880_113455949_113456132_113456211_113456263_113457090_113457137_113457266_113457389_113457718_113457779_113458144_113458197_113459243_113459340_113459457
ENSMUSG00000030282.15_0	chr6	+	1743	8	FSM	ENSMUSG00000030282.15	ENSMUST00000032419.9	1760	8	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGAAGTTTCTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	142702419	142721431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_142702753_142710012_142710156_142710279_142710436_142713529_142713664_142716248_142716344_142716891_142717064_142717840_142717995_142720875
ENSMUSG00000030284.12_0	chr6	+	2291	10	FSM	ENSMUSG00000030284.12	ENSMUST00000032422.6	2306	10	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGGAAAAGCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	113460265	113470292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113461038_113461455_113461539_113465031_113465143_113465439_113465532_113466394_113466572_113466655_113466752_113468613_113468698_113468854_113468951_113469084_113469220_113469647
ENSMUSG00000030286.7_0	chr6	-	1970	8	FSM	ENSMUSG00000030286.7	ENSMUST00000032425.7	1985	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTTGCTTCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	113508601	113491837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113492993_113494057_113494141_113494842_113494923_113496875_113496958_113497437_113497543_113499274_113499369_113499710_113499769_113508288
ENSMUSG00000030287.16_0	chr6	-	8319	57	FSM	ENSMUSG00000030287.16	ENSMUST00000053273.15	8331	57	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCTTAGAGAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	146403407	146012986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_146013256_146013874_146014037_146045606_146045768_146058467_146058634_146060384_146060516_146068076_146068170_146072721_146072918_146074741_146074907_146081677_146081854_146088937_146089064_146091953_146092147_146096010_146096119_146125506_146125630_146126197_146126294_146128988_146129100_146131190_146131392_146133791_146134049_146135375_146135560_146141769_146141958_146142634_146142744_146193022_146193132_146195510_146195654_146198046_146198238_146212484_146212606_146214336_146214466_146224608_146224735_146226488_146226741_146228591_146228793_146229792_146229916_146230970_146231097_146231205_146231296_146246554_146246729_146248565_146248732_146251520_146251579_146256127_146256258_146260791_146260986_146272750_146272902_146274591_146274737_146275861_146276114_146277289_146277476_146277560_146277681_146280842_146281016_146284181_146284344_146287372_146287515_146292282_146292444_146292808_146292909_146298410_146298563_146307255_146307301_146316818_146316915_146319100_146319248_146319429_146319514_146319915_146320015_146324203_146324363_146326999_146327087_146327952_146328069_146378184_146378256_146403284
ENSMUSG00000030291.13_0	chr6	+	806	4	FSM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146544051	146552099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146544151_146549662_146549778_146550647_146550749_146551608
ENSMUSG00000030291.13_6	chr6	+	708	3	ISM	ENSMUSG00000030291.13	ENSMUST00000032429.9	814	4	5617	1	5584	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGTTTTTGTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	146549661	146552099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_146549778_146550647_146550749_146551608
ENSMUSG00000030298.11_0	chr6	-	1336	9	FSM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTACTGTCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	113717697	113705032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914_113714960_113717605
ENSMUSG00000030298.11_2	chr6	-	1245	8	ISM	ENSMUSG00000030298.11	ENSMUST00000032440.6	1353	9	2744	10	2744	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTTTACTGTCATCCC	NA	NA	NA	NA	NA	NA	NA	NA	113714960	113705032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113705425_113706556_113706704_113707295_113707420_113707734_113707869_113711506_113711641_113712017_113712170_113713332_113713449_113714914
ENSMUSG00000030301.18_0	chr6	+	2443	13	FSM	ENSMUSG00000030301.18	ENSMUST00000032441.14	2459	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTTGCTTGATTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	147377376	147534102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_147377558_147409281_147409326_147412321_147412401_147435526_147435688_147437085_147437290_147438873_147438979_147464132_147464211_147476970_147477079_147491884_147491978_147492066_147492136_147493536_147493714_147508379_147508494_147533072
ENSMUSG00000030301.18_14	chr6	+	274	3	ISM	ENSMUSG00000030301.18	ENST00000539107.5	364	4	27755	9	27755	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATCAGGAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	147491882	147493646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_147491978_147492066_147492136_147493536
ENSMUSG00000030301.18_8	chr6	+	350	4	FSM	ENSMUSG00000030301.18	ENST00000539107.5	364	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATCAGGAGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	147464132	147493646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_147464211_147491884_147491978_147492066_147492136_147493536
ENSMUSG00000030303.16_2	chr6	+	309	2	NIC	ENSMUSG00000030303.16	novel	337	3	NA	NA	14	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGGTGAGAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	148058893	148067235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_148059039_148067071
ENSMUSG00000030303.16_4	chr6	+	163	1	ISM	ENSMUSG00000030303.16	ENSMUST00000032443.14	3480	12	118316	11112	7670	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	178	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGGTGAGAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	148067072	148067235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_148067100_148067200
ENSMUSG00000030304.12_0	chr6	-	4153	14	FSM	ENSMUSG00000030304.12	ENSMUST00000136008.8	4174	14	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATCTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	148113863	148080588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148083238_148083385_148083469_148084543_148084707_148089530_148089629_148090983_148091083_148092327_148092384_148096692_148096789_148097495_148097598_148100853_148100895_148102913_148102985_148103993_148104041_148106273_148106383_148108030_148108174_148113467
ENSMUSG00000030309.17_0	chr6	-	3678	19	FSM	ENSMUSG00000030309.17	ENSMUST00000111569.9	3697	19	11	8	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCACCTCCAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	148797724	148743997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148770486_148771144_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ENSMUSG00000030309.17_1	chr6	-	2935	18	FSM	ENSMUSG00000030309.17	ENSMUST00000072324.12	2952	18	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCACCTCCAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	148797638	148743997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148744897_148746669_148746734_148747650_148747752_148749603_148749790_148752772_148752942_148760098_148760240_148761984_148762087_148763901_148763967_148765000_148765071_148767327_148767451_148772110_148772155_148774505_148774662_148777950_148778034_148779239_148779479_148784945_148785033_148792106_148792170_148796434_148796655_148797515
ENSMUSG00000030310.11_0	chr6	+	2024	15	FSM	ENSMUSG00000030310.11	ENST00000642201.1	2025	15	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCCTCTGGAGGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	114259819	114292545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_114259838_114278879_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ENSMUSG00000030310.11_1	chr6	+	1994	14	ISM	ENSMUSG00000030310.11	ENST00000642201.1	2025	15	19065	8	61	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGCAGCCGCCTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	114278884	114292538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_114279149_114279460_114279593_114279707_114279809_114280918_114281029_114281747_114281881_114284657_114284793_114284985_114285090_114285518_114285644_114287098_114287212_114287423_114287556_114288765_114288869_114290399_114290501_114291255_114291424_114292265
ENSMUSG00000030313.16_0	chr6	-	9824	21	FSM	ENSMUSG00000030313.16	ENSMUST00000111557.8	9831	21	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTGTTGTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	149003174	148889571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148895388_148899754_148899930_148901418_148901546_148902096_148902180_148906663_148906852_148908223_148908343_148911252_148911399_148915613_148915736_148918479_148918609_148920838_148920921_148922042_148922122_148928780_148928934_148930607_148930740_148934763_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_149002680
ENSMUSG00000030313.16_2	chr6	-	2491	9	FSM	ENSMUSG00000030313.16	ENST00000354285.8	2509	9	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTATTCTTTTACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149002971	148934608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148934858_148937883_148938035_148943013_148943246_148945980_148946518_148956397_148956586_148969547_148970215_148982303_148982414_148986368_148986435_149002680
ENSMUSG00000030314.17_0	chr6	+	3758	19	FSM	ENSMUSG00000030314.17	ENSMUST00000032457.17	3761	19	1	2	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114620058	114837573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_114620112_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_10	chr6	+	2538	21	FSM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGGGCTCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114620089	114836180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_114620112_114648062_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_14	chr6	+	2418	19	ISM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	3820	7	3818	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCACTGATCTGGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	114623907	114836175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_15	chr6	+	3844	19	ISM	ENSMUSG00000030314.17	ENSMUST00000169310.10	3895	20	28002	0	27985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114648074	114837573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_114648214_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_16	chr6	+	2506	20	ISM	ENSMUSG00000030314.17	ENSMUST00000182902.8	2543	21	27983	5	27983	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGGGCTCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114648072	114836180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_114648214_114649751_114649805_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_21	chr6	+	3696	18	ISM	ENSMUSG00000030314.17	ENSMUST00000169310.10	3895	20	29871	0	29854	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114649943	114837573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_6	chr6	+	3895	20	FSM	ENSMUSG00000030314.17	ENSMUST00000169310.10	3895	20	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATTCTTTTTTTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114620072	114837573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_114620112_114648062_114648214_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030314.17_9	chr6	+	2457	20	FSM	ENSMUSG00000030314.17	ENSMUST00000182793.8	2459	20	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGGGCTCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	114620087	114836180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_114620112_114623897_114624019_114649934_114650102_114650608_114650664_114654900_114655019_114657122_114657201_114661361_114661479_114663030_114663181_114672583_114672673_114673991_114674114_114678117_114678209_114678885_114679031_114680288_114680448_114683093_114683289_114684464_114684666_114686054_114686171_114690253_114690330_114701854_114701936_114753917_114754041_114835951
ENSMUSG00000030315.16_0	chr6	-	2011	5	FSM	ENSMUSG00000030315.16	ENSMUST00000032459.14	2028	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	114898769	114838388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114867577_114867768_114898277
ENSMUSG00000030315.16_1	chr6	-	867	4	FSM	ENSMUSG00000030315.16	ENST00000451674.6	873	4	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGGCAACAGAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	114852079	114838930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114851999
ENSMUSG00000030315.16_2	chr6	-	776	3	ISM	ENSMUSG00000030315.16	ENST00000424529.6	749	4	2191	-109	2191	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGGCCTCAGTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	114841040	114838941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_114839398_114839716_114839841_114840844
ENSMUSG00000030315.16_6	chr6	-	737	4	FSM	ENSMUSG00000030315.16	ENST00000424529.6	749	4	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAGAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114843226	114839057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_114839398_114839716_114839841_114840844_114841041_114843149
ENSMUSG00000030316.14_0	chr6	-	1150	8	FSM	ENSMUSG00000030316.14	ENSMUST00000032461.12	1168	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGCTTGTCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115014826	114981348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_114981481_114987767_114987831_114989118_114989285_114993043_114993190_115002234_115002386_115009180_115009274_115011911_115012095_115014610
ENSMUSG00000030316.14_4	chr6	-	261	2	FSM	ENSMUSG00000030316.14	ENST00000273037.9	283	2	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGAATAAATGGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	114989276	114981377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_114981481_114989118
ENSMUSG00000030319.9_0	chr6	+	5456	15	FSM	ENSMUSG00000030319.9	ENSMUST00000075995.7	5474	15	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAGCCATCTACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	115751506	115782508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115751640_115757807_115757952_115758568_115758724_115759697_115759822_115762066_115762333_115763836_115763943_115764090_115764231_115766399_115766693_115768152_115768295_115768629_115770133_115772736_115772833_115774830_115775001_115776820_115776986_115778809_115778918_115780597
ENSMUSG00000030322.13_0	chr6	-	3592	8	FSM	ENSMUSG00000030322.13	ENSMUST00000032469.13	3614	8	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAAGTAAGGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115830322	115817669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115819524_115821023_115821128_115821530_115821681_115822274_115822410_115822503_115822579_115825866_115826694_115827578_115827801_115830097
ENSMUSG00000030322.13_3	chr6	-	2399	3	FSM	ENSMUSG00000030322.13	ENSMUST00000122816.3	2415	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATCCAGCTTGTCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	115830237	115824656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115826694_115827578_115827801_115830097
ENSMUSG00000030323.14_0	chr6	+	4104	29	FSM	ENSMUSG00000030323.14	ENSMUST00000112925.8	4122	29	13	5	13	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGTCTGCGTTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	115830443	115903655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUSG00000030323.14_6	chr6	+	4053	29	FSM	ENSMUSG00000030323.14	ENSMUST00000038234.13	4056	29	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCAGTGTCTGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	115830493	115903651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893930_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUSG00000030323.14_9	chr6	+	3756	30	FSM	ENSMUSG00000030323.14	ENSMUST00000112923.7	3765	30	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCGACAGCCTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	115830598	115903285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115830671_115839675_115839743_115841325_115841411_115852204_115852284_115854435_115854513_115857604_115857672_115858437_115858585_115859607_115859785_115861296_115861373_115863869_115864062_115864187_115864327_115865681_115865885_115867424_115867563_115868825_115868991_115871182_115871381_115876439_115876581_115879818_115879873_115882755_115882918_115887185_115887353_115889391_115889564_115890832_115890936_115892867_115893009_115893933_115894029_115897311_115897413_115900226_115900393_115900836_115900949_115901307_115901434_115902376_115902457_115902713_115902879_115903196
ENSMUSG00000030327.9_0	chr6	+	2457	8	FSM	ENSMUSG00000030327.9	ENSMUST00000032477.6	2476	8	8	11	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAAGGTATTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	122851440	122865889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_14	chr6	+	2058	5	FSM	ENSMUSG00000030327.9	ENST00000639167.1	2070	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGTGCAATAATGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	122851524	122865862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122851623_122859226_122859336_122859772_122859957_122863710_122863814_122864298
ENSMUSG00000030327.9_8	chr6	+	2039	7	FSM	ENSMUSG00000030327.9	ENST00000639811.1	2055	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGGCAGGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	122851527	122865661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122851623_122857371_122857473_122857616_122857722_122858459_122858542_122859226_122859336_122859772_122859957_122864298
ENSMUSG00000030330.16_0	chr6	+	1419	8	FSM	ENSMUSG00000030330.16	ENSMUST00000140131.8	1446	8	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTAGCCTGCTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	125016743	125025959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_1	chr6	+	1257	7	FSM	ENSMUSG00000030330.16	ENST00000619641.4	1269	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTCTTTTCGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	125016786	125026007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125016861_125020916_125020989_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_14	chr6	+	1183	6	ISM	ENSMUSG00000030330.16	ENST00000619641.4	1269	7	4134	8	4093	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATTCTTTTCGCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	125020916	125026007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_125020989_125024173_125024289_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_15	chr6	+	685	7	ISM	ENSMUSG00000030330.16	ENST00000412586.6	741	8	4100	12	4100	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAATAGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	125020923	125025358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_125020989_125023866_125024034_125024173_125024280_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_19	chr6	+	1562	7	ISM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	4123	0	4098	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	125020921	125026227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_3	chr6	+	1628	8	FSM	ENSMUSG00000030330.16	ENSMUST00000032480.14	1629	8	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTGCGGTGATAG	NA	NA	NA	NA	NA	NA	NA	NA	125016799	125026227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030330.16_9	chr6	+	729	8	FSM	ENSMUSG00000030330.16	ENST00000412586.6	741	8	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGAAATAGGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	125016823	125025358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024280_125024441_125024551_125024755_125024904_125025138_125025201_125025330
ENSMUSG00000030335.7_0	chr6	+	3409	3	FSM	ENSMUSG00000030335.7	ENSMUST00000032485.7	3427	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAATCATTTTCTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	125169136	125173223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125169397_125169478_125169590_125170185
ENSMUSG00000030337.17_0	chr6	+	600	4	FSM	ENSMUSG00000030337.17	ENST00000535180.5	615	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTATGTTCCCTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	125195547	125198690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125195664_125195873_125196033_125196548_125196605_125198421
ENSMUSG00000030339.8_1	chr6	-	2093	10	FSM	ENSMUSG00000030339.8	ENSMUST00000032489.8	2107	10	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGGGTTTTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	125290835	125283534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125284435_125284892_125285110_125286156_125286183_125286421_125286530_125289005_125289086_125289232_125289330_125289714_125289874_125289956_125290083_125290352_125290450_125290552
ENSMUSG00000030340.17_0	chr6	+	2157	11	FSM	ENSMUSG00000030340.17	ENST00000396966.6	2167	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGGAAACGACCAAACGAAC	NA	NA	NA	NA	NA	NA	NA	NA	125298994	125321314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125299338_125307873_125308148_125309055_125309247_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030340.17_27	chr6	+	2065	11	FSM	ENSMUSG00000030340.17	ENST00000540037.5	2079	11	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAAGCCTGACATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	125307878	125321529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125308148_125309055_125309230_125314759_125314864_125315198_125315363_125315799_125315899_125316068_125316187_125319564_125319644_125319750_125319809_125319983_125320040_125320184_125320261_125320661
ENSMUSG00000030341.18_0	chr6	+	2136	10	FSM	ENSMUSG00000030341.18	ENSMUST00000032491.15	2156	10	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1084	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGATCGCTGACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	125326696	125339438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125327026_125333787_125333942_125334275_125334405_125334683_125334834_125335016_125335096_125337459_125337537_125337672_125337787_125338054_125338084_125338261_125338548_125338649
ENSMUSG00000030342.9_0	chr6	-	1209	8	FSM	ENSMUSG00000030342.9	ENSMUST00000032492.9	1228	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACAGTGTCTCGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	125471744	125437237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125437690_125438188_125438273_125439076_125439167_125439289_125439389_125440647_125440723_125441352_125441451_125449371_125449475_125471536
ENSMUSG00000030344.12_0	chr6	+	3019	5	FSM	ENSMUSG00000030344.12	ENST00000545990.6	3034	5	8	7	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGCAGCATAAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	126830085	126851263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_126830214_126834063_126834175_126837217_126837314_126841478_126843822_126850922
ENSMUSG00000030346.17_0	chr6	-	2202	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	18	13	18	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATAATACTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	126916532	126900025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUSG00000030346.17_1	chr6	-	1860	9	FSM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAATGTGCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126916548	126900386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915_126912972_126916456
ENSMUSG00000030346.17_2	chr6	-	2128	8	ISM	ENSMUSG00000030346.17	ENSMUST00000112220.8	2233	9	3577	13	3577	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATAATACTCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	126912973	126900025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904651_126905103_126905191_126906955_126907066_126911676_126911813_126912915
ENSMUSG00000030346.17_5	chr6	-	1770	8	ISM	ENSMUSG00000030346.17	ENSMUST00000112221.8	1871	9	3577	9	3577	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAATGTGCATGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126912973	126900386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_126901304_126901880_126902031_126903321_126903481_126904500_126904654_126905103_126905191_126906955_126907066_126911676_126911813_126912915
ENSMUSG00000030347.7_0	chr6	+	2494	14	FSM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTACCGCCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	126916930	126952925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_126916990_126919274_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ENSMUSG00000030347.7_1	chr6	+	2433	13	ISM	ENSMUSG00000030347.7	ENSMUST00000032497.7	2501	14	2348	5	2348	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTACCGCCATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	126919276	126952925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_126919470_126921754_126921901_126923439_126923622_126927020_126927121_126927237_126927360_126931697_126931805_126932097_126932296_126932811_126932941_126938928_126939004_126943842_126944046_126950518_126950577_126951449_126951518_126952073
ENSMUSG00000030351.6_0	chr6	+	5175	8	FSM	ENSMUSG00000030351.6	ENSMUST00000032501.6	5188	8	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTCTGCCGATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	127864563	127930939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_127864842_127889912_127890008_127900514_127900707_127915163_127915239_127916056_127916162_127920179_127920339_127920669_127920757_127926755
ENSMUSG00000030352.16_0	chr6	-	3809	8	FSM	ENSMUSG00000030352.16	ENSMUST00000112173.8	3819	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAACCAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128120526	127938368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128120476
ENSMUSG00000030352.16_1	chr6	-	3754	7	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	102469	-1396	102469	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCACAACCAGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128011203	127938368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128
ENSMUSG00000030352.16_4	chr6	-	2575	9	FSM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACGTTCAGGATTCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	128113669	127939770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128113551
ENSMUSG00000030352.16_5	chr6	-	1338	8	ISM	ENSMUSG00000030352.16	ENSMUST00000112171.8	2584	9	53239	1114	53239	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTTAGGGTTAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	128060433	127940878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344
ENSMUSG00000030352.16_6	chr6	-	1394	9	FSM	ENSMUSG00000030352.16	ENSMUST00000032503.12	1405	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAGTTTAGGGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	128120523	127940880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_127941463_127942200_127942285_127942661_127942794_127943344_127943447_127943691_127943767_127944043_127944236_128011128_128011209_128060344_128060445_128120476
ENSMUSG00000030353.16_0	chr6	-	3057	12	FSM	ENSMUSG00000030353.16	ENSMUST00000006311.13	3076	12	16	3	16	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACCGTGAGAACTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	128277760	128204108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128224922_128225052_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUSG00000030353.16_2	chr6	-	1888	11	FSM	ENSMUSG00000030353.16	ENSMUST00000112157.4	1909	11	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTTTCAGAGGAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	128277762	128205150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128205443_128205530_128205684_128207554_128207696_128219363_128219538_128220332_128220473_128223283_128223340_128223780_128223825_128228502_128228566_128228884_128228950_128247830_128248086_128277257
ENSMUSG00000030357.11_0	chr6	-	2196	10	FSM	ENSMUSG00000030357.11	ENSMUST00000032508.11	2217	10	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	4535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACAACAAAACCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	128415631	128407077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411836_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030357.11_5	chr6	-	1317	10	FSM	ENSMUSG00000030357.11	ENST00000457486.2	1334	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTAGCCTGCCTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	128415464	128407746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128407844_128409384_128409625_128410068_128410255_128410488_128410573_128410665_128410757_128411267_128411425_128411714_128411793_128412676_128412820_128413532_128413678_128415368
ENSMUSG00000030361.17_0	chr6	-	1267	6	FSM	ENSMUSG00000030361.17	ENSMUST00000032512.15	1274	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGGGACTGGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	128599897	128586196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128586815_128595016_128595133_128595419_128595575_128596062_128596138_128597214_128597314_128599693
ENSMUSG00000030374.16_0	chr7	+	3523	18	FSM	ENSMUSG00000030374.16	ENSMUST00000019220.16	3535	18	5	7	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGATAGGTTTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16549818	16574849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565389_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ENSMUSG00000030374.16_1	chr7	+	3072	18	FSM	ENSMUSG00000030374.16	ENSMUST00000108495.9	3082	18	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAGATAGGTTTTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	16550248	16574849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16550560_16556420_16556525_16556930_16557005_16558063_16558143_16560388_16560587_16562599_16562742_16564250_16564411_16564949_16565064_16565410_16565506_16566850_16567027_16567102_16567151_16567799_16567922_16571486_16571658_16571773_16571915_16572194_16572294_16572487_16572575_16573665_16573898_16574130
ENSMUSG00000030380.18_0	chr7	-	1988	5	FSM	ENSMUSG00000030380.18	ENST00000594234.5	2006	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTAGTTGTACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	12787101	12777203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12778384_12785417_12785539_12785659_12785731_12786109_12786294_12786669
ENSMUSG00000030386.20_0	chr7	+	4730	7	FSM	ENSMUSG00000030386.20	ENSMUST00000098822.10	4748	7	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGCAAAAAGTAATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	12212225	12230150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12212634_12213590_12213674_12214361_12214419_12214861_12214954_12223496_12223624_12223875_12223972_12226283
ENSMUSG00000030393.9_1	chr7	-	446	2	FSM	ENSMUSG00000030393.9	ENST00000339656.8	460	2	12	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTTAGTCAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10224291	10223760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_10224023_10224107
ENSMUSG00000030393.9_7	chr7	-	422	2	FSM	ENSMUSG00000030393.9	ENST00000221735.12	438	2	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	6397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGAATGTGACACATGT	NA	NA	NA	NA	NA	NA	NA	NA	10224288	10223783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_10224021_10224103
ENSMUSG00000030397.12_0	chr7	-	3858	17	FSM	ENSMUSG00000030397.12	ENSMUST00000085715.7	3886	17	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTAAACAGACTTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	19192728	19158709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19160337_19161998_19162044_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ENSMUSG00000030397.12_1	chr7	-	3945	18	FSM	ENSMUSG00000030397.12	ENSMUST00000239292.2	3966	18	6	15	6	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAAGTTAAACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	19192740	19158714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19160337_19161998_19162044_19163030_19163111_19163250_19163530_19165693_19165798_19167243_19167462_19168481_19168642_19168736_19168847_19170862_19170963_19171323_19171444_19177041_19177279_19179033_19179091_19181105_19181177_19181606_19181673_19182350_19182400_19182529_19182584_19185480_19185682_19192368
ENSMUSG00000030399.3_0	chr7	+	2726	8	FSM	ENSMUSG00000030399.3	ENSMUST00000208710.2	2742	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACACCTGGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	19144959	19156760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19145072_19148043_19148256_19148821_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030399.3_2	chr7	+	1234	7	FSM	ENSMUSG00000030399.3	ENSMUST00000003643.3	1235	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGAGTGTGCCAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	19144987	19155508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19145072_19148821_19148977_19149325_19149459_19150643_19150816_19153363_19153488_19154031_19154222_19155132
ENSMUSG00000030401.17_0	chr7	+	1982	10	FSM	ENSMUSG00000030401.17	ENSMUST00000032559.17	1990	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19016548	19030077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19016791_19020459_19020505_19020607_19021079_19021171_19021436_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030401.17_1	chr7	+	1060	7	FSM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19025001	19030077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19025102_19027000_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030401.17_3	chr7	+	962	6	ISM	ENSMUSG00000030401.17	ENSMUST00000108468.5	1076	7	2005	8	2005	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCACTGCATTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	19026998	19030077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_19027209_19027527_19027667_19027772_19027843_19028343_19028391_19029375_19029435_19029640
ENSMUSG00000030403.10_0	chr7	-	2187	13	FSM	ENSMUSG00000030403.10	ENSMUST00000032561.9	2215	13	17	11	17	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCAAAGGTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	19005725	18990864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18991680_18991786_18991845_18992727_18992819_18992898_18992945_18993156_18993191_18993340_18993393_18994505_18994607_18994748_18994991_18995100_18995139_18995899_18995985_18998329_18998496_18998578_18998751_19005438
ENSMUSG00000030406.8_0	chr7	-	1510	11	FSM	ENSMUSG00000030406.8	ENST00000263281.7	1520	11	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGTATATATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	18898540	18891178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896897_18897434_18897539_18897962_18898071_18898444
ENSMUSG00000030406.8_4	chr7	-	1242	11	FSM	ENSMUSG00000030406.8	ENST00000304207.12	1258	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTCAGAGCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	18898540	18891261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18891494_18891570_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896897_18897434_18897539_18898444
ENSMUSG00000030406.8_5	chr7	-	1148	10	ISM	ENSMUSG00000030406.8	ENST00000304207.12	1258	11	1009	7	1009	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTCAGAGCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	18897540	18891261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_18891494_18891570_18891613_18893439_18893579_18893670_18893760_18893885_18893956_18894255_18894317_18894519_18894680_18896473_18896619_18896792_18896897_18897434
ENSMUSG00000030407.3_0	chr7	-	2677	7	FSM	ENSMUSG00000030407.3	ENSMUST00000032566.3	2710	7	14	19	14	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCTAAAACAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	18883202	18873645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18875225_18877110_18877228_18878584_18878685_18878808_18878962_18880794_18881077_18882300_18882445_18882900
ENSMUSG00000030409.17_0	chr7	+	2746	15	FSM	ENSMUSG00000030409.17	ENSMUST00000032568.14	2761	15	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18817785	18827743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826467_18826558_18826874
ENSMUSG00000030409.17_11	chr7	+	2553	16	FSM	ENSMUSG00000030409.17	ENSMUST00000108474.2	2591	16	35	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18817900	18827743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822035_18822112_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826132_18826180_18826467_18826558_18826874
ENSMUSG00000030409.17_8	chr7	+	2581	13	FSM	ENSMUSG00000030409.17	ENSMUST00000108473.10	2588	13	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCGCGCAATATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	18817813	18827743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18818080_18819910_18820003_18820256_18820341_18820413_18820510_18820817_18820967_18821164_18821259_18821418_18821626_18821925_18822190_18822835_18822922_18824853_18824966_18825605_18825770_18825863_18825962_18826874
ENSMUSG00000030410.17_0	chr7	+	2377	4	FSM	ENSMUSG00000030410.17	ENSMUST00000108479.2	2388	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTGTTTCTGTTCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	18810192	18816700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18810627_18811979_18812163_18813966_18815227_18816200
ENSMUSG00000030417.16_0	chr7	-	668	6	FSM	ENSMUSG00000030417.16	ENSMUST00000118501.8	684	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAAAGAAGATCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	35346935	35341411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35341611_35342039_35342112_35343048_35343141_35343775_35343838_35345568_35345607_35346730
ENSMUSG00000030421.10_0	chr7	-	3422	11	FSM	ENSMUSG00000030421.10	ENSMUST00000085513.6	3441	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTTATTTTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	37718957	37659425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37661123_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111_37696147_37718534
ENSMUSG00000030421.10_5	chr7	-	1453	10	FSM	ENSMUSG00000030421.10	ENST00000360605.8	1459	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTTGGTTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37696147	37660374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294_37682374_37696111
ENSMUSG00000030421.10_6	chr7	-	1407	9	ISM	ENSMUSG00000030421.10	ENST00000360605.8	1459	10	13784	6	13784	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTTGGTTTCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37682363	37660374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_37660525_37661890_37662135_37662817_37662958_37664655_37665005_37666745_37666915_37668804_37668863_37669030_37669123_37681035_37681172_37682294
ENSMUSG00000030423.8_0	chr7	-	2101	7	FSM	ENSMUSG00000030423.8	ENSMUST00000032585.8	2113	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTAAGCCAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	37970841	37961425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37962734_37963751_37963854_37965323_37965386_37965550_37965629_37966792_37967020_37968325_37968379_37970570
ENSMUSG00000030428.17_0	chr7	+	2489	14	FSM	ENSMUSG00000030428.17	ENSMUST00000119661.8	2512	14	10	13	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATGCTTACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4122538	4138333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4122780_4125475_4125655_4127618_4127731_4128521_4128743_4131168_4131265_4132299_4132373_4132656_4132733_4133579_4133636_4133795_4133889_4134289_4134383_4136073_4136217_4136355_4136402_4136661_4136738_4137349
ENSMUSG00000030431.9_0	chr7	-	1360	2	FSM	ENSMUSG00000030431.9	ENSMUST00000168578.3	1375	2	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGAACCACCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	4792649	4787564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4788279_4792003
ENSMUSG00000030432.13_0	chr7	+	1093	5	FSM	ENSMUSG00000030432.13	ENSMUST00000032597.12	1106	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	6759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCATGTCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	4795882	4798062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4795998_4796319_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000030432.13_4	chr7	+	764	4	FSM	ENSMUSG00000030432.13	ENSMUST00000078432.5	772	4	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATAAAGAGTCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	4795991	4797520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4796409_4796501_4796626_4797062_4797182_4797416
ENSMUSG00000030435.17_0	chr7	+	2175	12	FSM	ENSMUSG00000030435.17	ENSMUST00000005041.15	2183	12	2	6	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGGATCCTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	5065143	5082931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078227_5078466_5078716_5082180
ENSMUSG00000030435.17_3	chr7	+	2081	12	FSM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	1	6	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACTTTATGGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5065244	5082926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5065336_5069401_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ENSMUSG00000030435.17_5	chr7	+	1992	11	ISM	ENSMUSG00000030435.17	ENSMUST00000209099.2	2088	12	4156	6	-827	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACTTTATGGATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5069399	5082926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_5069538_5070208_5070254_5070542_5070647_5071030_5071183_5072442_5072560_5073360_5073500_5077579_5077660_5077733_5077857_5078139_5078239_5078466_5078716_5082180
ENSMUSG00000030443.17_0	chr7	-	2535	5	FSM	ENSMUSG00000030443.17	ENSMUST00000062765.14	2550	5	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACCAAGAAGAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	6334281	6318670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6320779_6326645_6326742_6328451_6328579_6332253_6332316_6334139
ENSMUSG00000030446.18_0	chr13	+	2377	4	FSM	ENSMUSG00000030446.18	ENSMUST00000181391.8	2399	4	17	5	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGTGTGATTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	67961875	67975116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67962016_67970359_67970487_67971218_67971315_67973102
ENSMUSG00000030447.16_0	chr7	+	6421	31	FSM	ENSMUSG00000030447.16	ENSMUST00000032629.16	6440	31	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCACCAATGGAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55491831	55582344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_12	chr7	+	4156	31	FSM	ENSMUSG00000030447.16	ENSMUST00000085255.11	4195	31	9	30	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAATAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55491962	55580216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55492056_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547572_55547721_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030447.16_17	chr7	+	4175	32	FSM	ENSMUSG00000030447.16	ENSMUST00000163845.4	4178	32	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAATAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55492002	55580216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55492056_55503749_55503803_55521606_55521725_55521814_55521905_55523193_55523272_55523404_55523507_55524654_55524837_55527438_55527536_55527626_55527756_55528824_55528930_55536473_55536566_55537569_55537688_55541736_55541860_55542867_55542994_55544728_55544896_55546415_55546564_55547985_55548140_55549662_55549820_55550251_55550349_55553936_55554014_55554121_55554231_55557066_55557187_55558112_55558313_55563187_55563276_55569167_55569312_55572494_55572586_55573622_55573754_55574121_55574195_55574859_55574955_55576035_55576275_55577934_55578083_55579745
ENSMUSG00000030450.12_0	chr7	+	1700	16	FSM	ENSMUSG00000030450.12	ENST00000353809.9	1710	16	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTATTTAAATATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55943471	56079151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55943624_55945188_55945269_55946847_55947002_55966110_55966177_55971241_55971299_55973321_55973447_55974401_55974541_55977001_55977135_55978454_55978603_55980065_55980124_55981706_55981816_56006850_56006979_56063478_56063539_56064130_56064236_56073035_56073130_56079059
ENSMUSG00000030451.17_108	chr7	+	455	3	FSM	ENSMUSG00000030451.17	ENST00000619355.1	474	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCAGGTATGGCCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	55742294	55763262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55742463_55762851_55763022_55763145
ENSMUSG00000030451.17_118	chr7	+	704	4	FSM	ENSMUSG00000030451.17	ENST00000562845.1	723	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAATAGTATTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	55758442	55764626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55758635_55762792_55763022_55763145_55763271_55764468
ENSMUSG00000030451.17_121	chr7	+	2179	13	FSM	ENSMUSG00000030451.17	ENST00000426501.5	2190	13	8	3	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACACTTGTCTAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	55787221	55806748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134_55806279_55806607
ENSMUSG00000030451.17_134	chr7	+	1579	10	FSM	ENSMUSG00000030451.17	ENST00000528584.5	1596	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGGTAGATCTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	55803532	55815019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55803756_55804762_55804902_55806134_55806279_55806607_55806751_55807038_55807307_55807395_55807530_55809121_55809221_55813489_55813659_55813756_55813883_55814885
ENSMUSG00000030451.17_22	chr7	+	3834	24	FSM	ENSMUSG00000030451.17	ENST00000430598.5	3847	24	5	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAGGTACACTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	55700620	55806742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55700697_55744012_55744187_55780916_55781088_55781546_55781651_55782169_55782321_55784343_55784559_55784778_55784912_55785017_55785146_55785233_55785430_55786334_55786469_55786968_55787143_55787216_55787354_55787467_55787620_55788526_55788719_55795511_55795700_55796284_55796478_55798386_55798538_55802203_55802373_55802791_55802940_55803013_55803213_55803524_55803756_55804762_55804902_55806134_55806279_55806607
ENSMUSG00000030452.17_2	chr7	-	3178	7	FSM	ENSMUSG00000030452.17	ENSMUST00000032635.14	3197	7	19	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGTTTCCCAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	55612205	55581034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55611199_55611321_55611947
ENSMUSG00000030452.17_4	chr7	-	1640	6	FSM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAATTATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55608303	55582280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228_55594458_55608216
ENSMUSG00000030452.17_5	chr7	-	1553	5	ISM	ENSMUSG00000030452.17	ENST00000674289.1	1655	6	13853	8	-1683	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAATTATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55594457	55582280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_55583296_55585545_55585707_55587319_55587411_55592727_55592785_55594228
ENSMUSG00000030452.17_8	chr7	-	692	3	ISM	ENSMUSG00000030452.17	ENST00000426223.1	754	4	5374	5	5374	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTATGAAGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55587400	55582768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_55583296_55585545_55585630_55587319
ENSMUSG00000030452.17_9	chr7	-	749	4	FSM	ENSMUSG00000030452.17	ENST00000426223.1	754	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTATGAAGTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55592774	55582768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_55583296_55585545_55585630_55587319_55587411_55592727
ENSMUSG00000030465.20_0	chr8	-	11304	15	FSM	ENSMUSG00000030465.20	ENSMUST00000038959.16	11319	15	8	7	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTTTGGAAGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	68427218	68141740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_68149840_68166334_68166479_68172551_68172697_68173447_68173606_68194412_68194484_68210723_68210918_68243549_68243594_68335632_68335723_68356762_68356828_68358910_68359024_68361137_68361219_68361334_68361542_68413038_68413432_68415940_68417007_68426784
ENSMUSG00000030465.20_1	chr8	-	2860	8	FSM	ENSMUSG00000030465.20	ENSMUST00000059374.5	2876	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGATTCATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68270876	68164184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_68166012_68166334_68166479_68172551_68172697_68173447_68173606_68194412_68194484_68210723_68210918_68243549_68243594_68270599
ENSMUSG00000030468.13_0	chr7	+	2544	12	FSM	ENSMUSG00000030468.13	ENSMUST00000005592.7	2569	12	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAAAGATGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	43057642	43067772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43057795_43057929_43058024_43058154_43058533_43058666_43058946_43059932_43059981_43060366_43060631_43060837_43060886_43060985_43061244_43061313_43061599_43061855_43061944_43062038_43062151_43067234
ENSMUSG00000030469.11_0	chr7	+	4481	4	FSM	ENSMUSG00000030469.11	ENSMUST00000058104.8	4494	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCATTGTTTTCTCATCC	NA	NA	NA	NA	NA	NA	NA	NA	43229046	43242659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43229191_43233491_43233721_43235777_43235905_43238678
ENSMUSG00000030470.16_0	chr7	-	606	5	ISM	ENSMUSG00000030470.16	ENSMUST00000167786.4	899	6	4093	237	-1	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAAGCTGCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48489306	48480382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214_48485384_48489168
ENSMUSG00000030470.16_1	chr7	-	680	6	FSM	ENSMUSG00000030470.16	ENSMUST00000032658.14	877	6	-38	235	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAAGCTGCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48497819	48480382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214_48485384_48489168_48489307_48497745
ENSMUSG00000030470.16_2	chr7	-	420	4	FSM	ENSMUSG00000030470.16	ENST00000649842.1	443	4	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGAAGCTGCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	48489292	48480385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_48480455_48482309_48482404_48483486_48483620_48489168
ENSMUSG00000030470.16_3	chr7	-	686	6	FSM	ENSMUSG00000030470.16	ENST00000533783.2	697	6	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAAGCTGCCTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48497829	48480382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_48480455_48482309_48482404_48483486_48483620_48485214_48485384_48489168_48489307_48497749
ENSMUSG00000030471.18_0	chr7	+	2391	17	FSM	ENSMUSG00000030471.18	ENSMUST00000118927.8	2410	17	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGAGACTTAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48438761	48477180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461174_48465199_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030471.18_1	chr7	+	2392	17	NNC	ENSMUSG00000030471.18	novel	2410	17	NA	NA	7	-8	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGAGACTTAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	48438757	48477180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_48438886_48445648_48445795_48449576_48449700_48451054_48451133_48452663_48452809_48454097_48454163_48454937_48455101_48455316_48455443_48458540_48458675_48461072_48461177_48465205_48465325_48466167_48466231_48466893_48466988_48468384_48468469_48472317_48472476_48474381_48474480_48476616
ENSMUSG00000030483.15_0	chr7	+	897	5	FSM	ENSMUSG00000030483.15	ENST00000593831.1	905	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATCAGTACTCCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	25610663	25625747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25610826_25610978_25611129_25616358_25616547_25616712_25616855_25625492
ENSMUSG00000030486.10_0	chr7	+	2569	4	FSM	ENSMUSG00000030486.10	ENSMUST00000205982.2	2577	4	5	3	5	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCTAACATTTTATACT	NA	NA	NA	NA	NA	NA	NA	NA	23954469	23961867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23954539_23955257_23955316_23957877_23958005_23959552
ENSMUSG00000030491.17_0	chr7	-	1163	11	FSM	ENSMUSG00000030491.17	ENST00000421545.2	1188	11	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAGATGAAAGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	35228687	35193678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35193757_35200814_35200896_35203578_35203656_35204400_35204496_35207689_35207783_35208200_35208391_35210639_35210726_35211356_35211413_35221344_35221465_35223362_35223500_35228537
ENSMUSG00000030493.14_0	chr7	-	1838	4	FSM	ENSMUSG00000030493.14	ENSMUST00000032704.12	1857	4	16	3	16	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAGATCCACAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	35096245	35091579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35092517_35094399_35094553_35094661_35094802_35095637
ENSMUSG00000030494.14_0	chr7	+	3487	15	FSM	ENSMUSG00000030494.14	ENSMUST00000032705.13	3508	15	13	8	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAATTTTTCTTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35033607	35091706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_35033837_35053156_35053273_35060404_35060534_35063041_35063118_35070133_35070212_35070539_35070665_35071729_35071897_35075584_35075773_35076398_35076556_35078989_35079110_35080761_35080957_35083393_35083471_35084062_35084210_35084751_35084908_35090179
ENSMUSG00000030498.16_0	chr7	+	2153	8	FSM	ENSMUSG00000030498.16	ENSMUST00000051912.13	2181	8	8	20	8	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACAAAGTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51528722	51644181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_51528990_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUSG00000030498.16_5	chr7	+	2207	8	FSM	ENSMUSG00000030498.16	ENSMUST00000107591.9	2232	8	13	12	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCCACACATTATT	NA	NA	NA	NA	NA	NA	NA	NA	51528810	51644194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_51529119_51537659_51537825_51546998_51547121_51576150_51576293_51586301_51586366_51593397_51593540_51602941_51603050_51643038
ENSMUSG00000030499.10_0	chr7	-	2382	7	FSM	ENSMUSG00000030499.10	ENSMUST00000108069.8	2407	7	13	12	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCAAAAGACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34353810	34338450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34353671
ENSMUSG00000030499.10_1	chr7	-	2438	7	FSM	ENSMUSG00000030499.10	ENSMUST00000032709.3	2480	7	35	7	35	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCAAAAGACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34354899	34338450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008_34352108_34354704
ENSMUSG00000030499.10_2	chr7	-	2386	6	FSM	ENSMUSG00000030499.10	ENSMUST00000108070.9	2409	6	12	11	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGCAAAAGACTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	34352250	34338450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34339875_34341232_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34352008
ENSMUSG00000030499.10_4	chr7	-	928	6	FSM	ENSMUSG00000030499.10	ENST00000588881.5	940	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGAGGGCCCTGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	34352101	34341234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34341539_34344262_34344408_34349380_34349557_34350171_34350265_34350997_34351115_34352008
ENSMUSG00000030505.18_0	chr7	+	2491	16	FSM	ENSMUSG00000030505.18	ENSMUST00000032715.13	2507	16	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACTGAATGTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	49428106	49508010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49428250_49428328_49428462_49430056_49430140_49430868_49430919_49431689_49431793_49435814_49435975_49436980_49437123_49441720_49441787_49448053_49448176_49456274_49456375_49467779_49467859_49476455_49476644_49478691_49478779_49498242_49498294_49498484_49498573_49507114
ENSMUSG00000030509.18_0	chr7	-	4898	6	FSM	ENSMUSG00000030509.18	ENSMUST00000124899.8	4928	6	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATACTGAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	66339322	66294320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66297674_66309397_66310004_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ENSMUSG00000030509.18_1	chr7	-	1814	5	FSM	ENSMUSG00000030509.18	ENST00000558747.5	1825	5	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	66339275	66296751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66297674_66328827_66329090_66331452_66331557_66338570_66338669_66338847
ENSMUSG00000030510.12_0	chr7	+	1499	11	FSM	ENSMUSG00000030510.12	ENST00000538112.6	1513	11	10	4	-4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACAATGTGGCGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66393247	66471594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66393500_66413836_66414097_66423337_66423457_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533_66445688_66471437
ENSMUSG00000030510.12_1	chr7	+	1153	10	FSM	ENSMUSG00000030510.12	ENST00000679737.1	1167	10	10	4	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACAATGTGGCGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	66413930	66471594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66414097_66423337_66423457_66429298_66429418_66431541_66431600_66433149_66433201_66434524_66434618_66435759_66435889_66439336_66439444_66445533_66445688_66471437
ENSMUSG00000030512.14_0	chr7	+	1237	9	FSM	ENSMUSG00000030512.14	ENSMUST00000153609.8	1248	9	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGCTGTGTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	65710095	65724334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65710441_65711871_65712020_65713514_65713594_65718914_65718962_65719171_65719275_65719866_65719947_65720337_65720414_65720979_65721074_65724069
ENSMUSG00000030513.15_0	chr7	+	1741	12	FSM	ENSMUSG00000030513.15	ENST00000559417.2	1760	12	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAAGGTCAGTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	65511852	65633588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65512192_65559949_65560055_65576941_65577047_65578854_65578932_65581424_65581514_65602666_65602840_65608844_65609058_65612651_65612753_65618715_65618820_65620289_65620408_65629894_65630084_65633460
ENSMUSG00000030515.10_0	chr7	+	3168	19	FSM	ENSMUSG00000030515.10	ENSMUST00000032728.9	3192	19	21	3	21	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCGGTATGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	65294666	65341836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65294963_65296000_65296070_65297225_65297417_65302007_65302132_65305431_65305554_65308607_65308726_65310866_65310932_65312048_65312128_65313620_65313768_65314628_65314728_65325711_65325879_65327743_65327907_65332514_65332653_65333555_65333634_65333809_65333911_65336185_65336291_65338626_65338700_65339715_65339831_65340918
ENSMUSG00000030516.15_0	chr7	-	7030	28	FSM	ENSMUSG00000030516.15	ENSMUST00000102592.10	7049	28	11	8	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65020976	64945920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_64947416_64949477_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUSG00000030516.15_1	chr7	-	7097	28	FSM	ENSMUSG00000030516.15	ENST00000614355.5	7112	28	9	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACAGTATTAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	65020983	64945920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65020557
ENSMUSG00000030516.15_10	chr7	-	6940	29	FSM	ENSMUSG00000030516.15	ENST00000356107.11	6951	29	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATCAGTAGGTGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65177532	64946005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_64947416_64949417_64949562_64950813_64951032_64952491_64952967_64956117_64956285_64960751_64960980_64962081_64962180_64962302_64963173_64963840_64964081_64964406_64964758_64967734_64967836_64968111_64968323_64968997_64969081_64972027_64972124_64972241_64972427_64972702_64972923_64973736_64973846_64976009_64976161_64978671_64978778_64979373_64979514_64985779_64985928_64986244_64986414_64986790_64986895_64989897_64990175_64992364_64992468_64993362_64993488_65004579_65004637_65162946_65163080_65177311
ENSMUSG00000030521.12_0	chr7	-	2231	11	FSM	ENSMUSG00000030521.12	ENSMUST00000032735.8	2248	11	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAACGGGCTTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	64042001	64026276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_64026553_64026915_64027144_64028485_64028594_64030677_64030789_64032638_64032777_64034049_64034118_64035426_64035569_64037196_64037366_64038613_64038772_64039194_64039880_64041853
ENSMUSG00000030522.15_0	chr7	+	5196	16	FSM	ENSMUSG00000030522.15	ENSMUST00000032736.11	5205	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCTTGCCTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	63937426	63990554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_63937590_63938086_63938148_63947207_63947345_63949286_63949360_63950287_63950431_63957875_63957967_63963831_63964013_63967838_63967927_63968006_63968096_63969162_63969294_63970312_63970383_63970910_63970982_63976399_63976570_63983059_63983231_63986459_63986643_63987180
ENSMUSG00000030523.19_1	chr7	+	4562	24	FSM	ENSMUSG00000030523.19	ENST00000256552.11	4577	24	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGCTGAGCCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	63848918	63918740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_63849107_63851634_63851849_63852753_63852879_63854169_63854342_63858023_63858199_63858616_63858741_63859704_63859778_63860585_63860687_63867237_63867409_63868855_63868991_63869989_63870041_63873438_63873580_63874373_63874404_63876463_63876757_63879804_63880034_63884705_63884826_63885493_63885626_63887403_63887533_63890167_63890420_63893170_63893364_63895691_63895837_63897109_63897313_63897933_63898067_63917707
ENSMUSG00000030525.9_0	chr7	-	1330	8	FSM	ENSMUSG00000030525.9	ENST00000635884.1	1345	8	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTATCATGTAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	62861983	62748973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_62749491_62754725_62754813_62755751_62755947_62757299_62757468_62760144_62760225_62798330_62798441_62809284_62809330_62861855
ENSMUSG00000030527.16_0	chr7	-	5092	15	FSM	ENSMUSG00000030527.16	ENSMUST00000122255.8	5115	15	17	6	17	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTCTCGGTGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80338608	80236380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80239700_80240109_80240213_80242263_80242345_80242425_80242627_80245357_80245657_80248494_80248713_80254098_80254149_80255495_80255582_80259644_80259681_80266212_80266314_80268341_80268405_80270269_80270332_80279367_80279488_80327093_80327193_80338354
ENSMUSG00000030528.13_3	chr7	-	4390	21	FSM	ENSMUSG00000030528.13	ENST00000648453.1	4400	21	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGAAAGCTGTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	80164434	80104962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80105280_80108560_80108745_80110477_80110601_80113520_80113714_80114485_80114686_80116522_80116662_80119337_80119529_80123776_80123973_80130082_80130244_80131151_80131259_80143849_80143999_80144180_80144280_80145737_80145852_80147152_80147272_80149500_80149693_80152030_80152702_80152987_80153121_80155566_80155695_80159151_80159312_80162526_80163243_80164336
ENSMUSG00000030530.16_0	chr7	-	3941	15	FSM	ENSMUSG00000030530.16	ENST00000681865.1	3957	15	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTATAGCTCTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	80048559	80038930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047736_80047842_80047942_80048341
ENSMUSG00000030530.16_11	chr7	-	4262	16	FSM	ENSMUSG00000030530.16	ENSMUST00000122232.8	4286	16	14	10	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAAACCAAGCCCGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	80052496	80038951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80052277
ENSMUSG00000030530.16_12	chr7	-	4320	16	FSM	ENSMUSG00000030530.16	ENSMUST00000120753.3	4332	16	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAACCAAGCCCGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80051452	80038952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80051174
ENSMUSG00000030530.16_13	chr7	-	4150	16	FSM	ENSMUSG00000030530.16	ENSMUST00000107362.10	4166	16	5	11	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAACCAAGCCCGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80055174	80038952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80041045_80041255_80041367_80041475_80041601_80041934_80042115_80042217_80042336_80042421_80042526_80042631_80042733_80043156_80043370_80045082_80045256_80045707_80045797_80046676_80046754_80046869_80046999_80047645_80047742_80047842_80047942_80048341_80048677_80055066
ENSMUSG00000030532.7_0	chr7	+	1492	4	FSM	ENSMUSG00000030532.7	ENSMUST00000032747.7	1510	4	11	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTCTCCAGAAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	79992862	79996455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79992998_79993286_79993343_79993463_79993705_79995395
ENSMUSG00000030532.7_1	chr7	+	832	4	FSM	ENSMUSG00000030532.7	ENST00000559898.5	847	4	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGTTCTCTGTGCCATCC	NA	NA	NA	NA	NA	NA	NA	NA	79992894	79995525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79992998_79993286_79993343_79993463_79993799_79995187
ENSMUSG00000030533.17_0	chr7	-	3678	23	FSM	ENSMUSG00000030533.17	ENSMUST00000107368.9	3685	23	0	7	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCATCTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	79995757	79975046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79990093_79990266_79990679_79990891_79991068_79991229_79995727
ENSMUSG00000030533.17_2	chr7	-	3237	20	FSM	ENSMUSG00000030533.17	ENSMUST00000032748.15	3260	20	19	4	19	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAAAGCATCTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	79989948	79975046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79989816
ENSMUSG00000030533.17_5	chr7	-	3154	21	FSM	ENSMUSG00000030533.17	ENST00000639885.1	3170	21	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGACGATCGGCCCGGG	NA	NA	NA	NA	NA	NA	NA	NA	79990890	79975374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79975626_79975760_79975917_79976056_79976175_79977330_79977447_79977665_79977780_79978200_79978268_79978440_79978569_79978769_79978911_79979253_79979396_79980085_79980181_79981300_79981602_79982724_79982897_79983767_79983939_79984442_79984612_79986053_79986222_79986672_79986766_79988588_79988765_79989061_79989099_79989298_79989461_79990099_79990266_79990679
ENSMUSG00000030534.14_0	chr7	+	2565	23	FSM	ENSMUSG00000030534.14	ENSMUST00000032749.12	2574	23	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTTTTTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79919405	79941327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79919828_79923976_79924058_79924371_79924434_79925793_79925844_79926145_79926214_79929719_79929766_79932232_79932328_79933175_79933281_79933727_79933825_79934031_79934110_79934289_79934364_79934765_79934853_79934997_79935089_79935303_79935379_79935581_79935647_79935758_79935814_79936855_79936903_79937525_79937659_79938147_79938222_79939729_79939832_79940015_79940092_79940195_79940313_79940862
ENSMUSG00000030536.11_0	chr7	-	7433	38	FSM	ENSMUSG00000030536.11	ENSMUST00000167377.3	7444	38	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTATTTTTCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	80453153	80361330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80363694_80366758_80366868_80370616_80370740_80372709_80372877_80373526_80373740_80375334_80375423_80375713_80375850_80376486_80376590_80377700_80377834_80378596_80378830_80379816_80379902_80379989_80380131_80383733_80383959_80385221_80385386_80386009_80386166_80387861_80388071_80388420_80388491_80388580_80388653_80388742_80388827_80389537_80389709_80392783_80392927_80393540_80393709_80393865_80393957_80398571_80398736_80401073_80401199_80401616_80401778_80401937_80402102_80405927_80406013_80407151_80407316_80407921_80408007_80409505_80409685_80410562_80410677_80412245_80412314_80415042_80415120_80416632_80416711_80418056_80418214_80449597_80449698_80452888
ENSMUSG00000030538.16_0	chr7	-	1037	7	FSM	ENSMUSG00000030538.16	ENSMUST00000065163.15	1047	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGTAGCAGCAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	79882551	79876894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79880063_79880173_79882091_79882127_79882257
ENSMUSG00000030538.16_7	chr7	-	679	5	FSM	ENSMUSG00000030538.16	ENSMUST00000071457.12	702	5	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTTTGACTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79882358	79876915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79877135_79877741_79877831_79877909_79878029_79878145_79878297_79882257
ENSMUSG00000030539.14_0	chr7	+	3935	15	FSM	ENSMUSG00000030539.14	ENSMUST00000032754.9	3949	15	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCAGAGGCTCTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79836599	79876272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79836740_79848266_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030539.14_2	chr7	+	3754	14	FSM	ENSMUSG00000030539.14	ENSMUST00000205822.2	3760	14	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCCTGAAGGGCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	79848194	79876159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79848519_79862543_79862708_79863010_79863074_79865371_79865471_79866076_79866189_79866477_79866592_79866695_79866848_79868630_79868813_79868933_79869085_79869868_79870080_79870189_79870306_79870535_79870703_79873681_79873765_79874343
ENSMUSG00000030541.17_0	chr7	-	1730	11	FSM	ENSMUSG00000030541.17	ENSMUST00000107384.10	1745	11	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGTCTTGATGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79765129	79744597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79744952_79745368_79745462_79745546_79745645_79745770_79745884_79747551_79747704_79747883_79748021_79748518_79748663_79748745_79748907_79750490_79750657_79752869_79752962_79764909
ENSMUSG00000030545.10_0	chr7	-	2222	3	FSM	ENSMUSG00000030545.10	ENSMUST00000032761.8	2241	3	7	12	7	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAAAATTGACTCCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	79392821	79385716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79387659_79389912_79390029_79392657
ENSMUSG00000030545.10_1	chr7	-	674	3	FSM	ENSMUSG00000030545.10	ENST00000561257.1	683	3	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTAAGGCTAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	79392730	79387080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79387566_79389912_79390029_79392657
ENSMUSG00000030545.10_2	chr7	-	600	2	ISM	ENSMUSG00000030545.10	ENST00000561257.1	683	3	2706	6	2706	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTAAGGCTAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	79390027	79387080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_79387566_79389912
ENSMUSG00000030545.10_3	chr7	-	774	2	FSM	ENSMUSG00000030545.10	ENST00000559170.1	784	2	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTTTAAGGCTAGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	79392853	79387080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79387659_79392657
ENSMUSG00000030549.7_0	chr7	-	1441	10	FSM	ENSMUSG00000030549.7	ENST00000268122.9	1456	10	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCAGGTAAGTCTCATC	NA	NA	NA	NA	NA	NA	NA	NA	79267271	79244537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79244616_79248236_79248363_79248717_79248843_79249104_79249242_79249426_79249565_79250241_79250409_79251334_79251483_79253487_79253639_79257292_79257480_79267087
ENSMUSG00000030551.15_0	chr7	-	3494	4	FSM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	0	13	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAAGACAGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70009601	70001702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_70002315_70002365_70004680_70007510_70008039_70009561
ENSMUSG00000030551.15_19	chr7	-	1713	3	FSM	ENSMUSG00000030551.15	ENST00000453270.2	1738	3	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAAAAAAGAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	70008948	70004205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_70004680_70007510_70008039_70008237
ENSMUSG00000030551.15_2	chr7	-	3443	3	ISM	ENSMUSG00000030551.15	ENST00000394171.6	3507	4	1574	13	930	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAAGACAGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70008027	70001702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_70002315_70002365_70004680_70007510
ENSMUSG00000030551.15_4	chr7	-	4203	3	FSM	ENSMUSG00000030551.15	ENSMUST00000032768.15	4222	3	8	11	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAAGACAGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70010333	70001702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_70004680_70007510_70008039_70009635
ENSMUSG00000030551.15_6	chr7	-	5301	4	FSM	ENSMUSG00000030551.15	ENST00000394166.8	5317	4	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAAAGACAGTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70011482	70001702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_70002315_70002365_70004680_70007510_70008039_70009635
ENSMUSG00000030555.17_0	chr7	+	1250	9	FSM	ENSMUSG00000030555.17	ENST00000558663.5	1271	9	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGGAGCGTACGCGAA	NA	NA	NA	NA	NA	NA	NA	NA	67297038	67361221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_67297156_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101
ENSMUSG00000030555.17_1	chr7	+	1611	10	FSM	ENSMUSG00000030555.17	ENST00000394129.6	1625	10	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAAGCACAGCTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	67297036	67361275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_67297199_67305055_67305318_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101
ENSMUSG00000030555.17_4	chr7	+	2201	11	FSM	ENSMUSG00000030555.17	ENSMUST00000107471.8	2216	11	12	3	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGCAGTTTGTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67297184	67376321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_67297594_67312074_67312275_67316910_67317035_67319445_67319597_67319799_67319926_67328641_67328820_67347971_67348078_67359071_67359200_67361101_67361252_67374981_67375065_67375775
ENSMUSG00000030556.14_0	chr7	-	2857	9	ISM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	3895	8	3871	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCAGGTGTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67291084	67163165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851
ENSMUSG00000030556.14_10	chr7	-	1740	5	ISM	ENSMUSG00000030556.14	ENSMUST00000032775.12	1817	6	3904	10	3904	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAAATGTATTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	67291051	67244156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_67245480_67267740_67267879_67268821_67268860_67278042_67278084_67290851
ENSMUSG00000030556.14_2	chr7	-	2915	10	FSM	ENSMUSG00000030556.14	ENSMUST00000053950.10	2923	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCCAGGTGTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67294979	67163165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_67164927_67179333_67179494_67181362_67181539_67195113_67195217_67209605_67209813_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030556.14_9	chr7	-	1808	6	FSM	ENSMUSG00000030556.14	ENSMUST00000032775.12	1817	6	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTATTATTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67294954	67244154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_67245480_67267740_67267879_67268821_67268860_67278042_67278084_67290851_67291089_67294925
ENSMUSG00000030557.18_0	chr7	-	5520	12	FSM	ENSMUSG00000030557.18	ENSMUST00000156690.8	5538	12	10	8	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACATCCAGACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	67022596	66880918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ENSMUSG00000030557.18_13	chr7	-	2650	11	FSM	ENSMUSG00000030557.18	ENSMUST00000076325.12	2664	11	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATTTTATAAGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67022599	66883793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ENSMUSG00000030557.18_14	chr7	-	2457	11	FSM	ENSMUSG00000030557.18	ENSMUST00000032776.15	2476	11	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTATTAAAAAGAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	67022599	66883966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66917814_66917953_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ENSMUSG00000030557.18_17	chr7	-	2158	10	FSM	ENSMUSG00000030557.18	ENST00000558812.5	2174	10	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTAAACAAACAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	67022630	66884057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66894268_66894293_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66966539_66966731_67022460
ENSMUSG00000030557.18_3	chr7	-	5410	10	FSM	ENSMUSG00000030557.18	ENST00000338042.10	5428	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTTGAGGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	67022631	66880986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_67022460
ENSMUSG00000030557.18_6	chr7	-	4745	11	FSM	ENSMUSG00000030557.18	ENSMUST00000107476.8	4759	11	10	4	-7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTATTAAAAAGAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	67022596	66881669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999616_66999670_67022460
ENSMUSG00000030557.18_8	chr7	-	2826	11	FSM	ENSMUSG00000030557.18	ENST00000557785.5	2842	11	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAGAACCTTGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67022582	66883594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66884977_66886271_66886399_66890061_66890189_66901404_66901593_66914612_66914673_66915690_66915911_66918016_66918149_66945122_66945327_66966539_66966731_66999596_66999670_67022460
ENSMUSG00000030559.9_0	chr7	+	1558	3	FSM	ENSMUSG00000030559.9	ENSMUST00000107256.4	1577	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGAGGTAAGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	88079493	88140774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_88079812_88099688_88099970_88139815
ENSMUSG00000030560.18_0	chr7	+	1086	5	FSM	ENSMUSG00000030560.18	ENST00000678915.1	1101	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2723	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACGGGTCTTTATCACT	NA	NA	NA	NA	NA	NA	NA	NA	87930611	87959128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_87930741_87946290_87946458_87948652_87948806_87951392_87951509_87958607
ENSMUSG00000030562.18_0	chr7	+	3733	18	FSM	ENSMUSG00000030562.18	ENSMUST00000032781.14	3753	18	3	17	3	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATTAAAATTAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	86895859	87047901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_86896111_86896695_86896792_86944991_86945103_86946662_86946748_86954045_86954144_86955936_86955965_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021236_87023561_87023631_87025389_87025491_87045978
ENSMUSG00000030562.18_3	chr7	+	1712	14	FSM	ENSMUSG00000030562.18	ENST00000527626.5	1729	14	13	4	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCACTTACACTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	86895993	87046399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_86896111_86896695_86896792_86963271_86963345_86966438_86966520_86970753_86970971_86972840_86973006_86973140_86973204_86988164_86988226_87009935_87010018_87019225_87019346_87021126_87021173_87023561_87023631_87025389_87025491_87045978
ENSMUSG00000030583.17_5	chr7	-	5818	21	ISM	ENSMUSG00000030583.17	ENST00000222345.11	5848	22	10	1768	10	-21	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCCTGGGTCACCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	29218030	29021567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_29021713_29023594_29023677_29025187_29025324_29028409_29028554_29030722_29030970_29031649_29031816_29038380_29038603_29047696_29048125_29050117_29050237_29053479_29053608_29063595_29063734_29065975_29066228_29070389_29070665_29076920_29077498_29082620_29082779_29085480_29085585_29086577_29086753_29087387_29087577_29096575_29096707_29098751_29100575_29217851
ENSMUSG00000030584.15_0	chr7	+	1711	12	FSM	ENSMUSG00000030584.15	ENST00000414789.5	1735	12	7	17	7	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACGTGGAAAAAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	29008459	29016304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29008708_29008835_29008997_29009069_29009178_29010689_29010818_29011031_29011122_29012272_29012352_29012506_29012639_29013563_29013615_29013707_29013828_29015048_29015162_29015668_29015751_29015905
ENSMUSG00000030587.6_0	chr7	-	1444	4	FSM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGATCTACTTTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	28947878	28945994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28947160_28947321_28947391_28947552_28947666_28947781
ENSMUSG00000030587.6_1	chr7	-	1353	3	ISM	ENSMUSG00000030587.6	ENSMUST00000032808.6	1466	4	220	9	220	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGATCTACTTTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	28947671	28945994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_28947160_28947321_28947391_28947552
ENSMUSG00000030588.13_0	chr7	+	1118	8	FSM	ENSMUSG00000030588.13	ENSMUST00000108238.8	1126	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28937761	28946954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_15	chr7	+	952	7	ISM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	5689	3	6	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCGGCCTGGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	28943500	28946816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945498_28946661
ENSMUSG00000030588.13_17	chr7	+	765	6	FSM	ENSMUSG00000030588.13	ENST00000592246.5	778	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCGGCCTGGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	28943504	28946816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28943728_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_18	chr7	+	1018	7	ISM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	5717	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28943494	28946954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_6	chr7	+	1104	8	FSM	ENSMUSG00000030588.13	ENSMUST00000032809.10	1111	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGCCTCCACTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	28937784	28946954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28937871_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945420_28946661
ENSMUSG00000030588.13_9	chr7	+	1008	8	FSM	ENSMUSG00000030588.13	ENST00000337679.12	1011	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCGGCCTGGCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	28937811	28946816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28937862_28943494_28943728_28943823_28943929_28944019_28944099_28944206_28944265_28945090_28945247_28945325_28945498_28946661
ENSMUSG00000030590.16_0	chr7	-	1283	8	FSM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	3	7	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTATAGGATCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	28855656	28851941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309_28855456_28855554
ENSMUSG00000030590.16_2	chr7	-	1182	7	ISM	ENSMUSG00000030590.16	ENSMUST00000164589.9	1293	8	203	7	152	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCTATAGGATCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	28855456	28851941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_28852273_28852746_28852915_28853843_28853961_28854040_28854119_28854576_28854783_28855099_28855235_28855309
ENSMUSG00000030591.18_0	chr7	-	1469	7	FSM	ENSMUSG00000030591.18	ENSMUST00000186182.2	1512	7	36	7	36	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGATATGAGTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	28880062	28873619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28874173_28874835_28874948_28875497_28875599_28876490_28876657_28878343_28878447_28878567_28878641_28879701
ENSMUSG00000030592.19_0	chr7	-	15323	106	FSM	ENSMUSG00000030592.19	ENSMUST00000179893.9	15358	106	29	6	29	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCACCATTATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	28824547	28702774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28702979_28703158_28703211_28703849_28703951_28704207_28704273_28704919_28705077_28707808_28707944_28708479_28708627_28708931_28708993_28709085_28709217_28711620_28711664_28713162_28713294_28715055_28715308_28716508_28716596_28717318_28717470_28718187_28718259_28718899_28719692_28723427_28723770_28735404_28735593_28737771_28737854_28739812_28739918_28740005_28740135_28740229_28740319_28743273_28743355_28744343_28744362_28745028_28745103_28746229_28746307_28746421_28746502_28746880_28746981_28748202_28748278_28748414_28748467_28751438_28751546_28751733_28751831_28752013_28752127_28752486_28752625_28752955_28753016_28754313_28754485_28755658_28755674_28756348_28756442_28756559_28756648_28758893_28759135_28759226_28759560_28760932_28761064_28761567_28761650_28763853_28764093_28764241_28764303_28765000_28765051_28765919_28766042_28766132_28766201_28767025_28767142_28767460_28767585_28767840_28767917_28767994_28768070_28768423_28768565_28768984_28769075_28769256_28769336_28769444_28769609_28769980_28770122_28770993_28771085_28771180_28771402_28772189_28772360_28772443_28772565_28774020_28774130_28774215_28774403_28774588_28774725_28775594_28775690_28776225_28776359_28776447_28776563_28777943_28778218_28779184_28779332_28781857_28781970_28782302_28782504_28782795_28783060_28785136_28785750_28786651_28786879_28787002_28787090_28789486_28789653_28790344_28790506_28791582_28791716_28793300_28793696_28794486_28794696_28794803_28794979_28795501_28795705_28796595_28796904_28798143_28798228_28799518_28799623_28799804_28799910_28801158_28801376_28802231_28802425_28802858_28803101_28803697_28803832_28803968_28804088_28804169_28804266_28804345_28804482_28808624_28808821_28809143_28809266_28809935_28810101_28810269_28810427_28810828_28810904_28811351_28811446_28814532_28814627_28814982_28815096_28815379_28815459_28815537_28815613_28816758_28816864_28818185_28818306_28824389
ENSMUSG00000030595.16_0	chr7	-	1229	6	FSM	ENSMUSG00000030595.16	ENSMUST00000085851.12	1243	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGACCCTGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28465932	28458463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28458630_28459251_28459522_28459601_28459691_28461026_28461361_28461450_28461557_28465668
ENSMUSG00000030598.16_0	chr7	+	1925	7	FSM	ENSMUSG00000030598.16	ENSMUST00000032818.13	1958	7	21	12	21	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAAAATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28416249	28437557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28436763
ENSMUSG00000030598.16_1	chr7	+	1544	7	FSM	ENSMUSG00000030598.16	ENSMUST00000108279.9	1563	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTAAAAAATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28416304	28437557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28416464_28424039_28424153_28431837_28432298_28432853_28432966_28434701_28434798_28435492_28435629_28437089
ENSMUSG00000030602.14_0	chr7	-	2891	10	FSM	ENSMUSG00000030602.14	ENSMUST00000108283.8	2899	10	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTATGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	28297602	28258243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458_28267724_28269217_28269292_28297459
ENSMUSG00000030602.14_3	chr7	-	2518	9	FSM	ENSMUSG00000030602.14	ENST00000358301.7	2527	9	9	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTGTGTGTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	28267663	28258249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28258633_28258722_28259231_28259569_28259705_28260223_28260350_28261962_28262090_28262372_28262507_28263630_28264072_28264237_28264697_28267458
ENSMUSG00000030603.17_0	chr7	-	1425	11	FSM	ENSMUSG00000030603.17	ENSMUST00000032824.10	1440	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATTTCTTCTTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	27749517	27741137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27741346_27741525_27741582_27741763_27741933_27742074_27742152_27742233_27742402_27746410_27746505_27746597_27746708_27746790_27746938_27748217_27748405_27748528_27748628_27749407
ENSMUSG00000030605.16_0	chr7	-	2107	10	FSM	ENSMUSG00000030605.16	ENSMUST00000032825.14	2125	10	13	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACCCTCTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78798795	78783521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78793025_78793137_78794994_78795127_78795369_78795493_78798642
ENSMUSG00000030605.16_1	chr7	-	1992	9	FSM	ENSMUSG00000030605.16	ENSMUST00000107409.5	2008	9	10	6	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	2970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGACCCTCTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	78798791	78783521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_78784295_78784399_78784550_78786404_78786590_78791392_78791538_78792149_78792303_78792616_78792799_78794994_78795127_78795369_78795493_78798642
ENSMUSG00000030609.19_0	chr7	+	4953	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107425.8	4956	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGTAATCTGATGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	78545677	78560957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78545763_78551977_78552579_78555590_78555792_78556891
ENSMUSG00000030609.19_1	chr7	+	1996	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107421.8	2007	4	4	7	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78545685	78558122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78545763_78552091_78552579_78555590_78555792_78556891
ENSMUSG00000030609.19_2	chr7	+	2212	4	FSM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGGAAAAGTGAGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	78545764	78558116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78545950_78551977_78552579_78555590_78555792_78556891
ENSMUSG00000030609.19_3	chr7	+	1922	3	ISM	ENSMUSG00000030609.19	ENSMUST00000107423.2	2230	4	6332	4	6332	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGAGTGAACTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	78552088	78558122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_78552579_78555590_78555792_78556891
ENSMUSG00000030610.14_0	chr7	-	2254	5	FSM	ENSMUSG00000030610.14	ENSMUST00000032839.13	2269	5	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACACTGTCTCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	78496997	78477222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_78477861_78483858_78484051_78489752_78489941_78492919_78494013_78496854
ENSMUSG00000030611.11_0	chr7	+	1047	6	FSM	ENSMUSG00000030611.11	ENSMUST00000032840.5	1056	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCTGTGAGTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	78432874	78442736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78433172_78433320_78433429_78438422_78438522_78440384_78440515_78441621_78441688_78442389
ENSMUSG00000030612.7_0	chr7	-	1115	4	FSM	ENSMUSG00000030612.7	ENSMUST00000032841.7	1134	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGAATTAACAGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	78432824	78424989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_78425474_78430185_78430360_78431147_78431335_78432554
ENSMUSG00000030613.14_0	chr7	+	1577	9	FSM	ENSMUSG00000030613.14	ENSMUST00000032842.13	1596	9	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTGTATCTCATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	92210365	92231492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92210844_92216829_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92223951_92224024_92224536_92224591_92227631_92227747_92231002
ENSMUSG00000030613.14_3	chr7	+	555	6	FSM	ENSMUSG00000030613.14	ENST00000529073.5	568	6	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAGTCTTTCAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	92216841	92227744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92216950_92217679_92217784_92221746_92221849_92223829_92223872_92224504_92224591_92227631
ENSMUSG00000030614.9_0	chr7	-	2240	5	FSM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGAGAATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	90125200	90116655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805_90121928_90125102
ENSMUSG00000030614.9_1	chr7	-	2146	4	ISM	ENSMUSG00000030614.9	ENSMUST00000032843.9	2259	5	3278	10	3278	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAAGGAGAATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	90121931	90116655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_90118370_90118777_90118890_90119972_90120167_90121805
ENSMUSG00000030615.13_0	chr7	-	781	5	FSM	ENSMUSG00000030615.13	ENSMUST00000032844.7	799	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGTCTGCAACATTAA	NA	NA	NA	NA	NA	NA	NA	NA	90106426	90099914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_90100144_90100750_90100866_90101914_90102109_90104631_90104728_90106279
ENSMUSG00000030616.17_10	chr7	+	1706	12	FSM	ENSMUSG00000030616.17	ENST00000529581.5	1728	12	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGCTAGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	90036412	90059021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_90036561_90036710_90036765_90038075_90038124_90041566_90041662_90044370_90044491_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030616.17_14	chr7	+	1276	11	FSM	ENSMUSG00000030616.17	ENST00000533892.5	1290	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATCCTAGTCAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	90036450	90058749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_90036561_90036710_90036765_90038075_90038124_90041566_90041662_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030616.17_2	chr7	+	3698	18	FSM	ENSMUSG00000030616.17	ENSMUST00000107210.3	3718	18	12	8	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGCATCAGTAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	89997918	90059639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89998101_90007340_90007493_90009252_90009386_90020664_90020747_90022034_90022150_90024596_90025401_90028709_90028782_90034250_90034353_90036710_90036765_90038075_90038124_90041566_90041662_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030616.17_7	chr7	+	1746	9	FSM	ENSMUSG00000030616.17	ENST00000389958.7	1763	9	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAGCTAGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	90036379	90059021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_90036765_90044370_90044491_90045681_90045852_90048391_90048495_90050605_90050777_90052238_90052318_90056118_90056219_90057563_90057770_90058609
ENSMUSG00000030619.11_0	chr7	-	2048	12	FSM	ENSMUSG00000030619.11	ENSMUST00000238981.2	2060	12	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAACTCTAGAAAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	89630177	89603866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_1	chr7	-	1930	12	FSM	ENSMUSG00000030619.11	ENST00000327320.8	1941	12	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCTGTGTTATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	89629813	89603943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89604364_89604507_89604813_89605462_89605622_89611463_89611570_89613936_89614071_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030619.11_8	chr7	-	1718	10	FSM	ENSMUSG00000030619.11	ENST00000528180.5	1733	10	12	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTACTGCTTTTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	89630195	89603974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89604272_89604738_89604813_89605462_89605622_89616920_89617013_89618778_89618861_89619513_89619640_89620747_89620814_89621438_89621532_89626104_89626258_89629619
ENSMUSG00000030621.18_0	chr7	+	4438	14	NNC	ENSMUSG00000030621.18	novel	4485	14	NA	NA	40	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATCAAAACATAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	89281950	89503561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_89282302_89385835_89385974_89389019_89389165_89435633_89435710_89445827_89445990_89455854_89455959_89482904_89483015_89495002_89495101_89495407_89495522_89497131_89497238_89497815_89497959_89498801_89498976_89499540_89499640_89500943
ENSMUSG00000030621.18_1	chr7	+	4470	14	FSM	ENSMUSG00000030621.18	ENSMUST00000032856.13	4485	14	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATCAAAACATAGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	89281919	89503561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89282302_89385835_89385970_89389014_89389165_89435633_89435710_89445827_89445990_89455854_89455959_89482904_89483015_89495002_89495101_89495407_89495522_89497131_89497238_89497815_89497959_89498801_89498976_89499540_89499640_89500943
ENSMUSG00000030629.16_0	chr7	-	2936	7	FSM	ENSMUSG00000030629.16	ENSMUST00000209117.2	2955	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAATTCAAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	84339154	84262981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84338953
ENSMUSG00000030629.16_13	chr7	-	1538	6	FSM	ENSMUSG00000030629.16	ENST00000616533.4	1569	6	15	16	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	84302236	84264280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84302089
ENSMUSG00000030629.16_14	chr7	-	1677	7	FSM	ENSMUSG00000030629.16	ENST00000261749.11	1702	7	9	16	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	84339078	84264280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84302089_84302251_84338953
ENSMUSG00000030629.16_15	chr7	-	1687	6	FSM	ENSMUSG00000030629.16	ENST00000613266.4	1712	6	9	16	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAGGAAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	84339185	84264280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283682_84338953
ENSMUSG00000030629.16_26	chr7	-	1385	5	FSM	ENSMUSG00000030629.16	ENST00000558087.5	841	5	4	-548	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAATAAAAAGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84283614	84264283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446
ENSMUSG00000030629.16_31	chr7	-	1455	6	FSM	ENSMUSG00000030629.16	ENST00000559835.5	1461	6	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAATAAAAAGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	84328584	84264283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUSG00000030629.16_46	chr7	-	629	5	FSM	ENSMUSG00000030629.16	ENST00000558688.5	637	5	2	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTACTGCTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84328576	84266982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84267172_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUSG00000030629.16_47	chr7	-	562	4	ISM	ENSMUSG00000030629.16	ENST00000558087.5	841	5	9	2151	9	-6	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTACTGCTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84283609	84266982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_84267172_84281863_84281965_84283092_84283202_84283446
ENSMUSG00000030629.16_5	chr7	-	1448	6	FSM	ENSMUSG00000030629.16	ENST00000430846.5	1466	6	0	18	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACTCGAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	84328577	84264270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283189_84283446_84283618_84328517
ENSMUSG00000030629.16_6	chr7	-	592	5	FSM	ENSMUSG00000030629.16	ENST00000434138.1	609	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGAAGATTTGAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	84283593	84265042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84281863_84281965_84283092_84283189_84283446
ENSMUSG00000030629.16_9	chr7	-	1519	7	FSM	ENSMUSG00000030629.16	ENSMUST00000178385.9	1538	7	4	15	4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAAACTCGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84328596	84264276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84265177_84267057_84267172_84270075_84270121_84281863_84281965_84283092_84283202_84283446_84283618_84328517
ENSMUSG00000030630.17_0	chr7	-	1567	14	FSM	ENSMUSG00000030630.17	ENSMUST00000032865.17	1585	14	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAATCTCTGTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	84255139	84234373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_84234553_84238038_84238157_84238781_84238884_84241589_84241637_84242393_84242470_84243920_84244052_84244665_84244766_84246241_84246295_84246385_84246484_84248261_84248353_84249984_84250035_84250240_84250363_84251288_84251400_84254850
ENSMUSG00000030638.14_1	chr7	+	1435	9	FSM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTATTCATAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81824719	81956610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_81824749_81909339_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030638.14_18	chr7	+	1341	7	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	92764	7	92764	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTATTCATAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81917483	81956610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030638.14_9	chr7	+	1401	8	ISM	ENSMUSG00000030638.14	ENST00000324537.5	1442	9	84625	7	84625	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTGTATTCATAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	81909344	81956610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_81909409_81917487_81917561_81919980_81920125_81923068_81923203_81925334_81925494_81933262_81933367_81934228_81934339_81955997
ENSMUSG00000030641.11_3	chr7	-	226	2	ISM	ENSMUSG00000030641.11	ENST00000524921.5	280	3	7612	6	7607	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGGTAAGAATCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	92515848	92511538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_92511695_92515778
ENSMUSG00000030641.11_4	chr7	-	274	3	FSM	ENSMUSG00000030641.11	ENST00000524921.5	280	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGGTAAGAATCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	92523460	92511538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92511695_92515778_92515858_92523421
ENSMUSG00000030643.15_0	chr7	+	3018	5	FSM	ENSMUSG00000030643.15	ENST00000534141.5	3031	5	10	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATTCTCATTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	92390817	92487316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92391051_92469190_92469292_92473005_92473090_92478733_92478914_92484896
ENSMUSG00000030643.15_2	chr7	+	3675	5	FSM	ENSMUSG00000030643.15	ENST00000612684.4	3690	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATTACATAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	92391295	92488087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92391411_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030643.15_8	chr7	+	1391	5	FSM	ENSMUSG00000030643.15	ENST00000260056.6	1399	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTGGTAATCTGG	NA	NA	NA	NA	NA	NA	NA	NA	92426499	92485519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92426899_92469190_92469292_92473005_92473090_92478733_92478918_92484896
ENSMUSG00000030647.9_0	chr7	+	662	3	FSM	ENSMUSG00000030647.9	ENSMUST00000032882.9	683	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATCATCTGTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97049220	97056999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97049565_97056072_97056217_97056825
ENSMUSG00000030649.19_16	chr7	+	600	4	ISM	ENSMUSG00000030649.19	ENST00000535503.5	687	5	213	3	150	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACTCCTTGGTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101547151	101548675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_2	chr7	+	848	6	FSM	ENSMUSG00000030649.19	ENST00000538393.5	865	6	10	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATTGTTTCCCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	101545552	101548735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101545658_101546939_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030649.19_8	chr7	+	679	5	FSM	ENSMUSG00000030649.19	ENST00000535503.5	687	5	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCACTCCTTGGTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	101546943	101548675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101547025_101547153_101547279_101547760_101547821_101548106_101548245_101548400
ENSMUSG00000030652.12_0	chr7	-	902	6	FSM	ENSMUSG00000030652.12	ENSMUST00000032887.4	914	6	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGGTTTTCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	118132568	118124285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118124518_118125046_118125116_118126559_118126700_118127526_118127642_118128781_118128961_118132401
ENSMUSG00000030653.18_0	chr7	+	4116	32	FSM	ENSMUSG00000030653.18	ENSMUST00000084894.15	4139	32	18	5	18	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCCTCCCACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	101060110	101162021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101060277_101100608_101100676_101110686_101110749_101130577_101130668_101133748_101133838_101143777_101143888_101144843_101144900_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ENSMUSG00000030654.10_0	chr7	-	2160	6	FSM	ENSMUSG00000030654.10	ENSMUST00000032888.10	2171	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCTTTGTTAACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117728874	117718113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117719634_117720383_117720469_117721148_117721267_117725618_117725739_117726356_117726491_117728691
ENSMUSG00000030654.10_1	chr7	-	300	2	FSM	ENSMUSG00000030654.10	ENST00000562819.5	317	2	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTCTCACAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	117726478	117719433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117719634_117726378
ENSMUSG00000030655.16_0	chr7	-	15523	63	FSM	ENSMUSG00000030655.16	ENSMUST00000032891.15	15557	63	24	10	24	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGATAACAGTATCTAA	NA	NA	NA	NA	NA	NA	NA	NA	117842836	117730540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117734842_117735908_117736016_117736096_117736277_117738635_117738743_117738897_117739110_117739652_117739881_117740532_117740713_117740942_117741096_117742480_117742616_117744553_117745024_117745190_117745381_117745473_117745625_117747956_117748184_117751500_117751736_117751899_117752173_117753394_117753675_117753800_117753974_117755148_117755340_117755739_117755959_117756082_117756193_117756277_117756417_117757216_117757466_117758813_117759044_117759384_117759632_117762374_117762598_117765192_117765348_117765586_117765805_117766344_117766507_117767035_117767214_117767316_117767548_117767830_117767970_117768080_117768226_117770908_117771194_117772276_117772526_117776060_117776182_117777587_117777748_117777975_117778124_117779594_117779705_117781596_117781799_117781966_117782110_117782961_117783117_117783695_117783861_117784049_117784247_117784589_117784790_117785256_117785398_117788293_117788396_117788481_117788570_117789005_117789125_117789711_117789874_117790007_117790139_117792672_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117842427
ENSMUSG00000030655.16_11	chr7	-	1677	11	FSM	ENSMUSG00000030655.16	ENST00000522841.6	1697	11	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTATTTATGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	117812259	117792621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117812111
ENSMUSG00000030655.16_23	chr7	-	1884	13	FSM	ENSMUSG00000030655.16	ENST00000565224.5	1889	13	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTTATTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	117817000	117792644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111_117812276_117816942
ENSMUSG00000030655.16_24	chr7	-	1826	12	ISM	ENSMUSG00000030655.16	ENST00000565224.5	1889	13	4725	5	0	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGTTATTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	117812275	117792644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_117792943_117794258_117794361_117795033_117795259_117797413_117797588_117799883_117799982_117801752_117801826_117802226_117802353_117806023_117806238_117807245_117807305_117809961_117810099_117811642_117811799_117812111
ENSMUSG00000030659.15_0	chr7	+	1671	14	FSM	ENSMUSG00000030659.15	ENSMUST00000032895.15	1685	14	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACACACGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116103612	116139814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179_116139262_116139676
ENSMUSG00000030659.15_3	chr7	+	1901	13	FSM	ENSMUSG00000030659.15	ENSMUST00000183175.8	1913	13	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGACACATAAAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116103654	116139671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_116103720_116108689_116108861_116121071_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116132306_116132397_116135096_116135268_116139179
ENSMUSG00000030659.15_8	chr7	+	1252	11	FSM	ENSMUSG00000030659.15	ENST00000458064.6	1276	11	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACTTTAAAGCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	116121081	116139773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_116121216_116123533_116123642_116125195_116125323_116125534_116125639_116126871_116127058_116127234_116127326_116128052_116128112_116128209_116128303_116135096_116135268_116139179_116139262_116139676
ENSMUSG00000030660.10_0	chr7	-	8031	33	FSM	ENSMUSG00000030660.10	ENSMUST00000170430.3	8044	33	2	11	2	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAGGAACTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116042682	115936510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116042538
ENSMUSG00000030660.10_2	chr7	-	5636	34	FSM	ENSMUSG00000030660.10	ENSMUST00000206219.2	5670	34	29	5	29	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCTCACAGCCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	116042655	115938966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115939459_115941386_115941513_115941596_115941707_115942045_115942119_115942209_115942328_115945353_115945479_115947354_115947563_115949267_115949378_115950007_115950165_115951032_115951203_115953212_115953350_115955469_115955600_115957870_115957964_115959230_115959336_115961281_115961463_115961792_115961888_115962583_115962678_115963662_115963852_115967278_115967425_115967981_115968094_115972029_115972198_115972962_115973086_115975457_115975669_115975748_115975795_115977854_115977999_115987078_115987143_115987276_115987357_115989678_115989791_115990507_115990629_115993435_115993594_116005094_116005199_116016687_116017817_116041825_116041914_116042538
ENSMUSG00000030662.11_0	chr14	+	4744	28	FSM	ENSMUSG00000030662.11	ENST00000261574.10	4751	28	1	6	1	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTCTGATTGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	121134646	121185475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_121134726_121145379_121145489_121148661_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUSG00000030662.11_10	chr14	+	4505	26	FSM	ENSMUSG00000030662.11	ENSMUST00000032898.9	4518	26	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGCATTACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	121148645	121185408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_121148756_121154767_121154849_121157334_121157528_121159537_121159641_121160451_121160549_121160892_121160998_121163612_121163736_121163824_121163946_121165869_121165958_121166712_121166820_121170255_121170381_121170462_121170553_121170641_121170816_121172440_121172660_121173833_121173918_121175976_121176110_121176187_121176310_121176871_121176969_121178233_121178407_121179043_121179156_121179241_121179298_121180060_121180184_121181091_121181312_121181744_121181974_121183488_121183631_121184130
ENSMUSG00000030663.13_0	chr7	+	1464	5	FSM	ENSMUSG00000030663.13	ENSMUST00000032899.12	1479	5	12	3	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGATTGTGATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	115692547	115704442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_115692761_115698674_115698759_115701178_115701240_115702445_115702556_115703446
ENSMUSG00000030663.13_4	chr7	+	552	4	FSM	ENSMUSG00000030663.13	ENST00000525684.1	567	4	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAATTATAAGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	115692585	115703629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_115692761_115698674_115698759_115702445_115702556_115703446
ENSMUSG00000030671.10_0	chr7	+	6557	16	FSM	ENSMUSG00000030671.10	ENSMUST00000032909.9	6573	16	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCCAAATACAAAAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	114014527	114138482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_114015698_114090674_114090726_114093720_114093970_114097146_114097287_114105421_114105529_114107329_114107541_114108073_114108148_114117515_114117656_114118746_114118885_114120898_114121011_114122567_114122682_114126015_114126216_114129894_114130099_114131481_114131644_114133799_114134068_114135265
ENSMUSG00000030672.13_0	chr7	+	652	7	FSM	ENSMUSG00000030672.13	ENSMUST00000206772.2	653	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTGGCAATTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	126808070	126813459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126808124_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030672.13_1	chr7	+	754	7	FSM	ENSMUSG00000030672.13	ENSMUST00000032910.13	766	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCAGTGTGTTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	126810789	126813468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126810936_126812032_126812126_126812336_126812413_126812589_126812695_126812781_126812861_126813106_126813156_126813262
ENSMUSG00000030677.9_0	chr7	-	2099	14	FSM	ENSMUSG00000030677.9	ENSMUST00000032915.8	2115	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCATGGTTGAGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	126641633	126626908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126627013_126627102_126627163_126627241_126627455_126628086_126628149_126628506_126628673_126630100_126630270_126631800_126631937_126632053_126632208_126632333_126632565_126632640_126632851_126633049_126633205_126633295_126633424_126634919_126635113_126641515
ENSMUSG00000030678.8_0	chr7	-	2623	6	FSM	ENSMUSG00000030678.8	ENSMUST00000205568.2	2650	6	14	13	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACTTGTCTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	126625684	126621314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126622341_126622653_126622879_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ENSMUSG00000030678.8_3	chr7	-	2264	6	FSM	ENSMUSG00000030678.8	ENSMUST00000206254.2	2282	6	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTAAATAAAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	126626193	126621321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399_126625487_126626122
ENSMUSG00000030678.8_4	chr7	-	2305	5	FSM	ENSMUSG00000030678.8	ENSMUST00000032916.6	2347	5	26	16	26	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTTAAATAAAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	126625598	126621321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126622341_126623615_126623788_126624047_126624112_126624475_126625327_126625399
ENSMUSG00000030681.19_0	chr7	-	2820	15	FSM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTATGTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126613785	126586040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980_126601131_126613690
ENSMUSG00000030681.19_2	chr7	-	2725	14	ISM	ENSMUSG00000030681.19	ENSMUST00000165096.9	2837	15	12663	9	12663	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTATGTTTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126601130	126586040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126586287_126586648_126586838_126587489_126587617_126587997_126588115_126588717_126589105_126591446_126591645_126591725_126591971_126592691_126592974_126594907_126595145_126595409_126595505_126597397_126597530_126597644_126597769_126600651_126600848_126600980
ENSMUSG00000030682.5_0	chr7	+	1958	6	FSM	ENSMUSG00000030682.5	ENSMUST00000032920.5	1974	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTTTTGGATGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	126575096	126579329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126575979_126576089_126576225_126577433_126577588_126578086_126578169_126578493_126578576_126578706
ENSMUSG00000030683.12_0	chr7	+	3125	18	FSM	ENSMUSG00000030683.12	ENST00000350527.7	3147	18	14	8	14	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTAACTGAGCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	126550162	126569770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126550289_126551171_126551304_126552155_126552246_126552556_126552697_126552886_126553089_126557440_126557627_126558218_126558388_126558962_126559127_126560908_126561110_126561524_126561664_126562436_126562634_126562734_126562930_126565896_126566089_126566185_126566378_126566878_126566918_126567098_126567217_126567331_126567429_126569224
ENSMUSG00000030685.6_0	chr7	+	1653	6	FSM	ENSMUSG00000030685.6	ENSMUST00000032924.6	1676	6	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTCTGCTGCTGACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126528066	126544796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126528471_126529804_126529975_126540504_126540595_126540682_126540736_126541318_126541515_126544056
ENSMUSG00000030688.16_0	chr7	+	1684	8	FSM	ENSMUSG00000030688.16	ENSMUST00000163799.9	1723	8	33	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGACTGGCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100966325	100995827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100966435_100970456_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUSG00000030688.16_1	chr7	+	1388	7	FSM	ENSMUSG00000030688.16	ENSMUST00000032927.14	1400	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGCCAGCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100970324	100995508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100970560_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUSG00000030688.16_2	chr7	+	1056	7	FSM	ENSMUSG00000030688.16	ENST00000545082.5	1075	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGAGTGACCGGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	100970399	100995338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100970560_100970920_100971154_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUSG00000030688.16_3	chr7	+	1246	7	FSM	ENSMUSG00000030688.16	ENSMUST00000210192.2	1258	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCAGCCAGCTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	100970664	100995508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100970758_100970920_100971241_100991704_100991853_100992390_100992495_100993123_100993242_100994841_100994895_100995098
ENSMUSG00000030689.16_1	chr7	-	1961	7	FSM	ENSMUSG00000030689.16	ENSMUST00000106343.3	1973	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGTTTTGTGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	126460998	126450756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126452164_126456397_126456515_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_4	chr7	-	808	7	FSM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCAGAAAAGGCGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	126460964	126451824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647_126460719_126460876
ENSMUSG00000030689.16_5	chr7	-	719	6	ISM	ENSMUSG00000030689.16	ENST00000567705.5	827	7	253	13	-83	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAGAAAAGGCGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	126460718	126451825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126452164_126456397_126456464_126456847_126456960_126457045_126457125_126460411_126460465_126460647
ENSMUSG00000030691.16_0	chr7	+	4099	19	FSM	ENSMUSG00000030691.16	ENST00000311172.11	4123	19	7	17	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAATGAAATTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100758100	100933589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100758247_100788357_100788404_100826350_100826428_100835594_100835740_100840873_100841008_100846086_100846142_100847687_100847817_100883078_100883202_100893327_100893424_100899651_100899769_100902736_100902842_100908818_100908981_100920776_100920912_100925824_100925909_100926032_100926211_100926616_100926838_100927557_100927688_100927778_100927862_100931656
ENSMUSG00000030691.16_7	chr7	+	894	5	FSM	ENSMUSG00000030691.16	ENST00000409263.5	902	5	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTCATCTTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100925846	100932097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100925909_100926032_100926211_100927557_100927688_100927778_100927862_100931656
ENSMUSG00000030691.16_8	chr7	+	830	4	ISM	ENSMUSG00000030691.16	ENST00000409263.5	902	5	191	5	191	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTCATCTTTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100926034	100932097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_100926211_100927557_100927688_100927778_100927862_100931656
ENSMUSG00000030693.11_0	chr7	+	1351	6	FSM	ENSMUSG00000030693.11	ENSMUST00000014058.11	1373	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGACCTCCAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	43430472	43434826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43430571_43430922_43431050_43432159_43432344_43432880_43433156_43433739_43433874_43434293
ENSMUSG00000030695.17_0	chr7	-	1492	9	FSM	ENSMUSG00000030695.17	ENSMUST00000032934.12	1511	9	11	8	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	23537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTCTGTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	126398415	126394413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126398216
ENSMUSG00000030695.17_17	chr7	-	1255	7	FSM	ENSMUSG00000030695.17	ENST00000569798.5	1270	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGGGTCTTCAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126396927	126394528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815
ENSMUSG00000030695.17_6	chr7	-	1536	10	FSM	ENSMUSG00000030695.17	ENSMUST00000087566.11	1549	10	7	6	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGGAGTCTGTTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	126398306	126394413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126394687_126394784_126394985_126395121_126395297_126395388_126395473_126395766_126395928_126396025_126396081_126396508_126396721_126396815_126396949_126397145_126397299_126398216
ENSMUSG00000030697.8_0	chr7	-	1309	8	FSM	ENSMUSG00000030697.8	ENSMUST00000206570.2	1400	8	73	18	73	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAGAAAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	126391439	126385057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232
ENSMUSG00000030697.8_1	chr7	-	1336	9	FSM	ENSMUSG00000030697.8	ENSMUST00000032936.8	1359	9	3	20	3	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAGAAGAAAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	126391665	126385057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126385464_126385543_126385734_126386391_126386519_126386608_126386783_126387288_126387391_126387555_126387607_126388195_126388248_126391232_126391396_126391594
ENSMUSG00000030699.17_0	chr7	+	1706	7	FSM	ENSMUSG00000030699.17	ENST00000627355.2	1718	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3726	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAACTTGAGCTAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	126380667	126384726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126380797_126380884_126381120_126382016_126382285_126382376_126382548_126383663_126383783_126383863_126384048_126384126
ENSMUSG00000030701.18_1	chr7	-	465	5	FSM	ENSMUSG00000030701.18	ENST00000543085.5	470	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGGATGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	100306014	100294127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808_100303912_100305941
ENSMUSG00000030701.18_2	chr7	-	391	4	ISM	ENSMUSG00000030701.18	ENST00000543085.5	470	5	2109	0	2109	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGGATGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	100303910	100294127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_100294277_100294776_100294877_100302860_100302901_100303808
ENSMUSG00000030704.15_4	chr7	+	3193	8	FSM	ENSMUSG00000030704.15	ENSMUST00000032946.10	3214	8	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGCACACGGTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	100256804	100290466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100279044_100279151_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030704.15_6	chr7	+	3088	8	FSM	ENSMUSG00000030704.15	ENSMUST00000098252.5	3110	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGGCACACGGTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	100256909	100290466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100257501_100275758_100275818_100277610_100277665_100278872_100278979_100280948_100281061_100283851_100283946_100285901_100285969_100288461
ENSMUSG00000030706.18_0	chr7	-	4265	8	FSM	ENSMUSG00000030706.18	ENSMUST00000150042.8	4285	8	7	13	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTAAAAAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100232302	100194970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100198590_100199746_100199837_100201785_100201889_100208954_100209125_100214400_100214487_100220458_100220497_100223668_100223722_100232196
ENSMUSG00000030706.18_3	chr7	-	349	3	FSM	ENSMUSG00000030706.18	ENST00000540547.1	360	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGGTGGAATGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	100257496	100256533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100256565_100257097_100257252_100257332
ENSMUSG00000030707.16_0	chr7	-	1652	11	FSM	ENSMUSG00000030707.16	ENSMUST00000032949.14	1660	11	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTCAGACTCCGGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	126303982	126298946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126299158_126299428_126299645_126299755_126299814_126299911_126300058_126300163_126300269_126300461_126300582_126300689_126300875_126300961_126301092_126301177_126301301_126302147_126302347_126303823
ENSMUSG00000030714.15_0	chr7	+	1295	10	FSM	ENSMUSG00000030714.15	ENSMUST00000032956.10	1312	10	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCATGTTTGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	126248492	126272092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126248650_126260223_126260321_126263100_126263177_126264087_126264161_126269801_126269867_126270709_126270840_126270905_126271053_126271209_126271246_126271327_126271491_126271741
ENSMUSG00000030714.15_2	chr7	+	292	3	FSM	ENSMUSG00000030714.15	ENST00000549950.5	314	3	10	12	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGTGAATCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126270716	126271846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126270840_126270905_126270970_126271741
ENSMUSG00000030714.15_3	chr7	+	368	3	FSM	ENSMUSG00000030714.15	ENST00000649930.1	392	3	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAGTGAATCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126270723	126271846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126270840_126270905_126271053_126271741
ENSMUSG00000030717.10_0	chr7	-	811	3	FSM	ENSMUSG00000030717.10	ENSMUST00000032961.4	829	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACAGCTTTGGCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126224836	126222426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126222752_126224061_126224206_126224494
ENSMUSG00000030718.10_0	chr7	-	2752	14	FSM	ENSMUSG00000030718.10	ENSMUST00000032963.10	2772	14	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTTATTTGTCTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	100021502	99975951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99977090_99978241_99978310_99981064_99981130_99983134_99983180_99984254_99984385_99987576_99987701_99990237_99990304_99991052_99991144_99994158_99994314_99997011_99997064_99997328_99997387_100003915_100004009_100004474_100004569_100020929
ENSMUSG00000030720.17_21	chr7	-	1031	11	FSM	ENSMUSG00000030720.17	ENST00000565316.6	1039	11	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126180033	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174642_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964
ENSMUSG00000030720.17_4	chr7	-	937	11	FSM	ENSMUSG00000030720.17	ENST00000355477.10	945	11	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126180033	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178572_126178646_126179315_126179402_126179504_126179585_126179964
ENSMUSG00000030720.17_5	chr7	-	786	9	FSM	ENSMUSG00000030720.17	ENST00000395653.9	792	9	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126180035	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315_126179402_126179964
ENSMUSG00000030720.17_7	chr7	-	875	10	FSM	ENSMUSG00000030720.17	ENST00000357806.11	884	10	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126180905	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315_126179402_126179964_126180037_126180817
ENSMUSG00000030720.17_8	chr7	-	2141	13	FSM	ENSMUSG00000030720.17	ENST00000569430.7	2158	13	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126184867	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964_126179986_126183759
ENSMUSG00000030720.17_84	chr7	-	800	9	FSM	ENSMUSG00000030720.17	ENST00000637100.1	803	9	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCACACCCACCTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	126180033	126174146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126174260_126174374_126174431_126174642_126174709_126176980_126177094_126178344_126178489_126178572_126178646_126179315_126179402_126179504_126179585_126179964
ENSMUSG00000030720.17_9	chr7	-	712	8	ISM	ENSMUSG00000030720.17	ENST00000395653.9	792	9	638	5	638	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCTTGACAGGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	126179398	126171449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126171559_126171642_126171784_126174165_126174260_126174374_126174431_126174515_126174585_126174661_126174709_126176980_126177094_126179315
ENSMUSG00000030725.5_0	chr7	+	1647	2	FSM	ENSMUSG00000030725.5	ENSMUST00000032967.4	1663	2	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACATTCGCCTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	99808499	99810572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_99808955_99809380
ENSMUSG00000030726.17_0	chr7	-	3054	12	FSM	ENSMUSG00000030726.17	ENSMUST00000032969.14	3069	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAGCTCTGGTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	99770764	99731324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99761476_99761580_99768880_99768937_99770570
ENSMUSG00000030726.17_6	chr7	-	1536	11	FSM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAATTCATTCAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	99770631	99732606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99768880_99768937_99770570
ENSMUSG00000030726.17_7	chr7	-	1468	10	ISM	ENSMUSG00000030726.17	ENST00000532497.5	1546	11	1705	7	1705	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAATTCATTCAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	99768929	99732606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_99733062_99737270_99737350_99738858_99738963_99742578_99742689_99745579_99745743_99748670_99748744_99749626_99749889_99755769_99755903_99757718_99757759_99768880
ENSMUSG00000030727.13_0	chr7	+	2218	13	FSM	ENSMUSG00000030727.13	ENSMUST00000106407.9	2234	13	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTAGTCAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126028244	126045064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030727.13_1	chr7	+	2206	12	NIC	ENSMUSG00000030727.13	novel	2234	13	NA	NA	7	-9	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTAGTCAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126028244	126045064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_126028329_126028747_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030727.13_6	chr7	+	2201	12	FSM	ENSMUSG00000030727.13	ENSMUST00000106405.2	2279	12	69	9	69	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAGCTAGTCAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	126028680	126045064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126028958_126034831_126034990_126037541_126037653_126037733_126038079_126039337_126039434_126039519_126039619_126041008_126041165_126043301_126043480_126043589_126043602_126043694_126043751_126043991_126044109_126044468
ENSMUSG00000030730.13_0	chr7	-	3459	23	FSM	ENSMUSG00000030730.13	ENSMUST00000032974.13	3477	23	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTCTGGCCTTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	126062271	126045038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126045299_126045716_126045759_126046042_126046161_126046308_126046427_126046554_126046689_126046773_126046860_126047032_126047236_126047333_126047555_126047708_126048045_126049276_126049496_126049596_126049723_126051826_126051959_126052194_126052298_126052533_126052623_126055548_126055716_126055891_126056190_126056285_126056372_126057079_126057161_126058750_126058890_126059868_126059974_126061276_126061360_126061671_126061690_126061976
ENSMUSG00000030731.14_0	chr7	+	2313	10	FSM	ENSMUSG00000030731.14	ENST00000593901.5	2320	10	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATCCCACCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44034295	44049447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44034340_44035379_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ENSMUSG00000030731.14_9	chr7	+	2262	9	ISM	ENSMUSG00000030731.14	ENST00000593901.5	2320	10	1093	5	1093	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATCCCACCTGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	44035388	44049449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_44035546_44039919_44040449_44041822_44042196_44042772_44042992_44044833_44044955_44045062_44045235_44045326_44045460_44048509_44048578_44048959
ENSMUSG00000030733.11_0	chr7	-	3075	11	FSM	ENSMUSG00000030733.11	ENSMUST00000205440.2	3089	11	8	6	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGATGGCTGTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	126074254	126066171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126066946_126067121_126067222_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126072650_126072788_126074167
ENSMUSG00000030733.11_2	chr7	-	2935	9	FSM	ENSMUSG00000030733.11	ENST00000618521.4	2947	9	9	3	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGATGGCTGTGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	126074351	126066171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126066946_126067644_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ENSMUSG00000030733.11_9	chr7	-	3012	10	FSM	ENSMUSG00000030733.11	ENST00000359285.9	3028	10	11	5	-6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCATCATGATGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126074281	126066177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126066946_126067121_126067222_126067591_126067814_126067927_126068140_126068296_126068501_126070293_126070470_126070566_126070659_126070871_126070974_126071244_126072267_126074167
ENSMUSG00000030737.18_0	chr7	-	2056	10	FSM	ENSMUSG00000030737.18	ENST00000454962.6	2068	10	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAGTTCAGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	99355790	99308722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99338069_99338233_99355717
ENSMUSG00000030737.18_1	chr7	-	1983	9	ISM	ENSMUSG00000030737.18	ENST00000454962.6	2068	10	17562	8	6784	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAGTTCAGAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	99338232	99308722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99338069
ENSMUSG00000030737.18_10	chr7	-	1657	11	FSM	ENSMUSG00000030737.18	ENST00000525650.5	1667	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCAGGACCACTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	99355791	99309292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99355717
ENSMUSG00000030737.18_11	chr7	-	1584	10	ISM	ENSMUSG00000030737.18	ENSMUST00000107086.9	3993	14	9691	1697	9691	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACCAGGACCACTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	99335325	99309292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090
ENSMUSG00000030737.18_6	chr7	-	2132	12	FSM	ENSMUSG00000030737.18	ENST00000532236.5	2143	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGATGGCCAACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	99355789	99308978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99309384_99310310_99310432_99310724_99310790_99311653_99311818_99313985_99314152_99316098_99316457_99320156_99320251_99331901_99332093_99334682_99334782_99335090_99335325_99338069_99338233_99355717
ENSMUSG00000030738.12_20	chr7	-	2717	20	FSM	ENSMUSG00000030738.12	ENST00000564243.5	2727	20	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGTCACCCTGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	126165355	126146162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162895_126163587_126163778_126163874_126163941_126165250
ENSMUSG00000030738.12_4	chr7	-	3358	21	FSM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	3	22	3	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	2267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	126165580	126145648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250_126165392_126165519
ENSMUSG00000030738.12_5	chr7	-	3291	20	ISM	ENSMUSG00000030738.12	ENSMUST00000032992.7	3383	21	198	22	-23	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAATATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	126165385	126145648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126146253_126146356_126146520_126146606_126146695_126146777_126146844_126146934_126147095_126151146_126151511_126155454_126155680_126155881_126156073_126156344_126156439_126156543_126156670_126156855_126156998_126157806_126157911_126158024_126158185_126161737_126161863_126162175_126162283_126162414_126162470_126162798_126162925_126163587_126163778_126163874_126163941_126165250
ENSMUSG00000030741.16_0	chr7	-	2207	12	FSM	ENSMUSG00000030741.16	ENSMUST00000032994.15	2219	12	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGTCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125976611	125969232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971583_125971740_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125975845_125975912_125976008
ENSMUSG00000030741.16_4	chr7	-	1633	10	FSM	ENSMUSG00000030741.16	ENST00000352260.11	1652	10	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTGTAATCAGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	125976281	125969254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125969586_125969906_125970079_125970349_125970449_125970712_125970779_125971129_125971320_125971916_125972063_125972941_125973009_125973093_125973246_125974238_125974376_125976008
ENSMUSG00000030742.8_0	chr7	-	506	8	FSM	ENSMUSG00000030742.8	ENST00000395456.7	512	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGCCTAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125967724	125963380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470_125967536_125967666
ENSMUSG00000030742.8_1	chr7	-	582	7	FSM	ENSMUSG00000030742.8	ENST00000566177.5	588	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGCCTAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125967724	125963380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967388_125967470_125967533_125967666
ENSMUSG00000030742.8_2	chr7	-	444	7	ISM	ENSMUSG00000030742.8	ENST00000395456.7	512	8	193	6	193	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGCCTAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125967531	125963380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967279_125967357_125967388_125967470
ENSMUSG00000030742.8_4	chr7	-	519	6	ISM	ENSMUSG00000030742.8	ENST00000566177.5	588	7	197	6	197	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAAAGCCTAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	125967527	125963380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_125963440_125963557_125963633_125963730_125963794_125967047_125967143_125967217_125967388_125967470
ENSMUSG00000030744.14_0	chr7	-	1892	7	FSM	ENSMUSG00000030744.14	ENSMUST00000032998.13	1908	7	10	6	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACTCATGAGTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	99132935	99127108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99128159_99128480_99128678_99129082_99129271_99130903_99130999_99131467_99131562_99131776_99131908_99132798
ENSMUSG00000030747.6_0	chr7	-	2237	8	FSM	ENSMUSG00000030747.6	ENSMUST00000033001.6	2262	8	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACAGCCTGTGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	98831911	98802874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98818904_98819034_98831598
ENSMUSG00000030747.6_1	chr7	-	1345	7	FSM	ENSMUSG00000030747.6	ENST00000376262.7	1359	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGATATTTATGGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98831807	98803533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98803908_98806183_98806387_98807359_98807535_98808039_98808245_98813841_98813913_98814288_98814397_98831598
ENSMUSG00000030748.10_0	chr7	+	5233	11	FSM	ENSMUSG00000030748.10	ENSMUST00000033004.8	5256	11	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGCAACTTCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	125151305	125178637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_125151501_125163723_125163900_125164808_125164897_125166327_125166470_125168194_125168347_125169113_125169266_125170605_125170763_125172022_125172123_125173809_125173889_125174311_125174362_125174695
ENSMUSG00000030750.14_0	chr7	-	1102	8	FSM	ENSMUSG00000030750.14	ENSMUST00000033006.14	1120	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCAGGGCTTGTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	125090756	125066817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125067016_125067450_125067572_125068200_125068318_125070284_125070432_125071046_125071125_125071279_125071402_125085509_125085657_125090584
ENSMUSG00000030751.19_0	chr7	-	1182	10	FSM	ENSMUSG00000030751.19	ENSMUST00000033008.10	1201	10	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCTATTGTGTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	113875342	113863848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_113864192_113865668_113865780_113866355_113866436_113868955_113869086_113869567_113869639_113870288_113870378_113873046_113873151_113873260_113873363_113873650_113873696_113875235
ENSMUSG00000030752.9_0	chr7	+	2366	8	FSM	ENSMUSG00000030752.9	ENSMUST00000033010.9	2389	8	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATTAAAAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	125043853	125061424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_125043965_125051399_125051901_125054262_125054430_125055604_125055738_125056135_125056181_125059046_125059197_125060086_125060180_125060258
ENSMUSG00000030752.9_4	chr7	+	593	2	FSM	ENSMUSG00000030752.9	ENST00000568965.1	609	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGGACCAGACTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	125051470	125060421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_125051901_125060258
ENSMUSG00000030753.16_0	chr7	+	3704	5	FSM	ENSMUSG00000030753.16	ENSMUST00000033009.16	3723	5	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTCAGGTGAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98352325	98367266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362103_98364188
ENSMUSG00000030753.16_1	chr7	+	2259	5	FSM	ENSMUSG00000030753.16	ENST00000551685.2	2276	5	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAATACCTAGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	98352603	98366095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98352686_98356203_98356325_98359332_98359441_98362065_98362107_98364188
ENSMUSG00000030753.16_3	chr7	+	2010	2	FSM	ENSMUSG00000030753.16	ENST00000447914.2	2028	2	9	9	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACCTAGAAGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	98359341	98366099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98359441_98364188
ENSMUSG00000030753.16_4	chr7	+	1912	1	NIC	ENSMUSG00000030753.16	novel	3723	5	NA	NA	4855	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACCTAGAAGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	98364187	98366099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_98364200_98366100
ENSMUSG00000030754.10_0	chr7	-	3329	22	FSM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGATTTGTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	113853938	113814802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104_113853255_113853840
ENSMUSG00000030754.10_1	chr7	-	3233	21	ISM	ENSMUSG00000030754.10	ENSMUST00000033012.9	3346	22	690	9	690	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAGATTTGTATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	113853256	113814802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_113815173_113815697_113815854_113816856_113816947_113818760_113818907_113820877_113820998_113822437_113822583_113825837_113826018_113826181_113826410_113831409_113831531_113832431_113832593_113834173_113834271_113836021_113836168_113836528_113836676_113836761_113836870_113837584_113837705_113839859_113839998_113844658_113844752_113845962_113846078_113848042_113848213_113849280_113849511_113853104
ENSMUSG00000030757.14_0	chr7	-	7823	7	FSM	ENSMUSG00000030757.14	ENSMUST00000042470.14	7831	7	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGAAGGATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123099668	123074610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_123079996_123084162_123084655_123088801_123089486_123094028_123094156_123094515_123094587_123097808_123097996_123098791
ENSMUSG00000030759.17_1	chr7	+	4942	13	FSM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAGTTTGATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	113113051	113170709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_113113145_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030759.17_4	chr7	+	3952	13	FSM	ENSMUSG00000030759.17	ENSMUST00000164745.8	3972	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACCTCATTTGGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	113113081	113169658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_113113236_113125194_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030759.17_9	chr7	+	4851	12	ISM	ENSMUSG00000030759.17	ENSMUST00000033018.15	4962	13	12152	9	12124	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTAAGTTTGATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	113125192	113170709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_113125246_113138479_113138674_113139742_113139919_113146608_113146789_113149172_113149351_113150279_113150325_113150441_113150561_113151141_113151210_113152848_113153021_113160582_113160713_113165591_113165720_113167301
ENSMUSG00000030760.15_0	chr7	-	11320	11	FSM	ENSMUSG00000030760.15	ENSMUST00000033020.14	11340	11	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCAAAGCGGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	97958731	97855601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030760.15_17	chr7	-	716	10	FSM	ENSMUSG00000030760.15	ENST00000533873.1	740	10	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACACCTACTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	97958658	97866021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97866098_97867262_97867309_97873118_97873224_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97958554
ENSMUSG00000030760.15_6	chr7	-	1332	11	FSM	ENSMUSG00000030760.15	ENST00000679754.1	1356	11	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTAATAAAAAAGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	97958659	97865544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97866098_97867262_97867309_97873118_97873251_97875605_97875708_97893155_97893215_97901096_97901133_97906902_97906985_97908611_97908665_97910793_97910847_97915343_97915455_97958554
ENSMUSG00000030763.8_0	chr7	+	1360	11	FSM	ENSMUSG00000030763.8	ENSMUST00000033025.7	1369	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGTACAATGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	122977213	123029581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003708_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030763.8_10	chr7	+	1285	11	FSM	ENSMUSG00000030763.8	ENSMUST00000206574.2	1286	11	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTGCTACATCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	122977278	123029571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003712_123009950_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030763.8_3	chr7	+	1362	11	NIC	ENSMUSG00000030763.8	novel	1369	11	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGTACAATGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	122977215	123029581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_122977479_122999660_122999753_123000666_123000789_123002057_123002135_123003645_123003712_123009946_123010050_123017440_123017562_123020760_123020863_123021929_123022022_123027316_123027415_123029355
ENSMUSG00000030766.16_1	chr7	-	3313	20	FSM	ENSMUSG00000030766.16	ENSMUST00000106442.9	3336	20	14	9	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	122969095	122878502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122893694_122893929_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUSG00000030766.16_2	chr7	-	3093	19	FSM	ENSMUSG00000030766.16	ENSMUST00000098060.5	3102	19	0	9	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAAACTTGCTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	122969109	122878502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_122879340_122885720_122886237_122891258_122891429_122895632_122895790_122896717_122896810_122899711_122899826_122902918_122903000_122905597_122905680_122906190_122906303_122907508_122907637_122913636_122913719_122913866_122913936_122917609_122917722_122920810_122920888_122921101_122921214_122922835_122922910_122926461_122926567_122930448_122930489_122968976
ENSMUSG00000030768.13_0	chr1	-	4557	6	FSM	ENSMUSG00000030768.13	ENST00000675961.1	4575	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAAACCTAGCATTGCC	NA	NA	NA	NA	NA	NA	NA	NA	182917416	182867856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881638_182916918
ENSMUSG00000030768.13_1	chr1	-	4958	10	FSM	ENSMUSG00000030768.13	ENSMUST00000003035.12	4984	10	22	4	22	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACCTGTCTCCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	183003027	182867833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_182984515_182984604_183002886
ENSMUSG00000030768.13_2	chr1	-	4683	8	FSM	ENSMUSG00000030768.13	ENSMUST00000171366.7	4687	8	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACCTGTCTCCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	182929025	182867833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182928943
ENSMUSG00000030768.13_4	chr1	-	4883	9	FSM	ENSMUSG00000030768.13	ENSMUST00000195372.2	4901	9	14	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCACCTGTCTCCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	183003040	182867833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182871435_182877807_182877906_182880115_182880214_182880483_182880612_182881480_182881605_182888681_182888712_182916918_182917441_182955059_182955188_183002886
ENSMUSG00000030769.16_0	chr7	+	2455	16	FSM	ENSMUSG00000030769.16	ENST00000347898.7	2471	16	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCTTTGGGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	122813776	122872399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_1	chr7	+	2094	15	FSM	ENSMUSG00000030769.16	ENST00000424767.6	2108	15	9	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCTTTGGGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	122814032	122872399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122814221_122834820_122834978_122837346_122837419_122838591_122838697_122839961_122840022_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_2	chr7	+	2038	15	FSM	ENSMUSG00000030769.16	ENST00000565769.5	2056	15	13	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCTTTGGGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	122814036	122872399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122857576_122857783_122859729_122859866_122864411_122864520_122864809_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030769.16_4	chr7	+	1763	14	FSM	ENSMUSG00000030769.16	ENST00000569071.1	1780	14	12	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCCTTTGGGGATACTT	NA	NA	NA	NA	NA	NA	NA	NA	122814035	122872399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122814221_122837346_122837419_122838591_122838697_122839961_122840022_122847160_122847266_122849293_122849400_122851635_122851717_122859729_122859866_122864411_122864520_122864879_122864961_122866971_122867141_122868245_122868462_122869063_122869227_122872223
ENSMUSG00000030770.16_0	chr7	+	2218	14	FSM	ENSMUSG00000030770.16	ENSMUST00000106643.8	2222	14	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGGAAAAAGAAAAAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	112026711	112188832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112026738_112027107_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030770.16_2	chr7	+	4418	13	FSM	ENSMUSG00000030770.16	ENSMUST00000033030.14	4454	13	22	14	22	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAACATACAAACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	112026934	112190885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112027308_112143383_112143474_112143939_112144011_112146717_112146821_112159135_112159277_112166969_112167086_112172077_112172137_112174561_112174582_112175606_112175669_112176142_112176212_112178862_112178965_112180156_112180230_112187746
ENSMUSG00000030772.7_0	chr7	-	3348	8	FSM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCATGGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	111758259	111715229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389_111757626_111758172
ENSMUSG00000030772.7_1	chr7	-	3262	7	ISM	ENSMUSG00000030772.7	ENSMUST00000033036.7	3359	8	638	6	638	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGTCCATGGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	111757626	111715229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_111717638_111718554_111718712_111719594_111719740_111720796_111720890_111748167_111748252_111749817_111749956_111757389
ENSMUSG00000030774.14_0	chr7	+	2784	15	FSM	ENSMUSG00000030774.14	ENSMUST00000206984.2	2794	15	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATAGCATTGAGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	97437757	97561090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97438182_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUSG00000030774.14_15	chr7	+	2828	15	FSM	ENSMUSG00000030774.14	ENST00000530617.5	2847	15	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTCTACAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	97492162	97561577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560507
ENSMUSG00000030774.14_7	chr7	+	3046	15	FSM	ENSMUSG00000030774.14	ENSMUST00000033040.12	3065	15	8	11	-3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTCTACAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	97492149	97561577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97492349_97503642_97503857_97514678_97514780_97515268_97515417_97520781_97520820_97532678_97532796_97535504_97535680_97538163_97538228_97543171_97543221_97547731_97547845_97549546_97549665_97552843_97552944_97553844_97554042_97557014_97557153_97560302
ENSMUSG00000030779.17_0	chr7	+	6178	18	FSM	ENSMUSG00000030779.17	ENSMUST00000052135.14	6184	18	5	1	5	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTTGCAAATGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	122569791	122601779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122596818_122596921_122597747_122599503_122599806
ENSMUSG00000030779.17_3	chr7	+	3347	11	FSM	ENSMUSG00000030779.17	ENST00000381039.7	3371	11	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCACTTGTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	122570093	122601770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122599806
ENSMUSG00000030779.17_5	chr7	+	5709	17	FSM	ENSMUSG00000030779.17	ENSMUST00000071590.6	5728	17	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCACTTGTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	122570149	122601770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122570351_122575158_122575259_122577798_122577836_122582185_122582231_122584215_122584305_122584423_122584524_122584882_122585023_122587824_122587998_122589052_122589157_122589267_122589606_122591191_122591289_122591446_122591526_122591622_122591678_122593892_122593962_122596165_122596529_122597747_122599503_122599806
ENSMUSG00000030780.16_0	chr7	-	2618	13	FSM	ENSMUSG00000030780.16	ENSMUST00000033044.16	2627	13	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGCTTCATACTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	127897334	127870551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127871788_127872643_127872722_127872822_127872967_127873804_127873876_127875257_127875316_127875399_127875585_127875666_127875738_127884284_127884387_127887435_127887542_127887630_127887664_127889761_127889808_127896633_127896749_127896961
ENSMUSG00000030782.18_0	chr7	+	3765	10	FSM	ENSMUSG00000030782.18	ENSMUST00000164710.8	3788	10	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGATTACACAGAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	127845998	127854863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127846181_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_13	chr7	+	1360	10	FSM	ENSMUSG00000030782.18	ENST00000361773.7	1373	10	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTCTTGGGATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127847358	127852536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848145_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_2	chr7	+	1699	10	FSM	ENSMUSG00000030782.18	ENSMUST00000070656.12	3026	10	1314	13	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCACACTTTACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127847356	127852871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_3	chr7	+	1738	11	FSM	ENSMUSG00000030782.18	ENSMUST00000167965.8	1746	11	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCACACTTTACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127846149	127852871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127846181_127847348_127847465_127847591_127847645_127847749_127847893_127848058_127848147_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030782.18_6	chr7	+	1397	11	FSM	ENSMUSG00000030782.18	ENST00000394863.8	1399	11	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTCTTGGGATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127846153	127852536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127846181_127847348_127847465_127847591_127847645_127847749_127847893_127848058_127848145_127848261_127848368_127848471_127848667_127851248_127851423_127851649_127851732_127851955_127852105_127852270
ENSMUSG00000030785.9_0	chr7	-	662	3	FSM	ENSMUSG00000030785.9	ENSMUST00000033049.9	680	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATATTACTCAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	127805550	127804615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127804985_127805071_127805209_127805394
ENSMUSG00000030788.17_0	chr7	-	4017	6	FSM	ENSMUSG00000030788.17	ENSMUST00000177236.8	4032	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCATCCGTAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	110443657	110412745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_110416058_110420460_110420569_110424423_110424606_110432943_110433053_110436283_110436478_110443545
ENSMUSG00000030788.17_1	chr7	-	840	6	ISM	ENSMUSG00000030788.17	ENSMUST00000177462.8	859	7	7079	8	258	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGATGTACACAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	110436478	110414797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_110414998_110415145_110415192_110420460_110420569_110424423_110424606_110432943_110433053_110436283
ENSMUSG00000030790.16_0	chr7	+	1371	4	FSM	ENSMUSG00000030790.16	ENSMUST00000033054.10	1390	4	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCATTCTCGGTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	110226883	110229024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_110227029_110227463_110227584_110227731_110227882_110228068
ENSMUSG00000030795.19_0	chr7	+	5519	15	FSM	ENSMUSG00000030795.19	ENSMUST00000106251.10	5536	15	15	2	-15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGACTGCCCATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	127566643	127584871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571009_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUSG00000030795.19_24	chr7	+	1697	15	ISM	ENSMUSG00000030795.19	ENST00000380244.7	1791	16	2074	4	2053	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAATTCTGTTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	127568732	127581197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962_127581107_127581146
ENSMUSG00000030795.19_4	chr7	+	1780	16	FSM	ENSMUSG00000030795.19	ENST00000380244.7	1791	16	7	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAATTCTGTTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	127566665	127581197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962_127581107_127581146
ENSMUSG00000030795.19_5	chr7	+	1823	15	FSM	ENSMUSG00000030795.19	ENSMUST00000077609.12	1831	15	1	7	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTAAATTCTGTTTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	127566662	127581197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127566750_127568733_127568759_127568888_127569044_127571012_127571155_127571288_127571477_127571725_127571943_127573571_127573607_127575059_127575093_127576389_127576494_127577312_127577443_127579063_127579166_127579294_127579419_127580362_127580464_127580582_127580728_127580962
ENSMUSG00000030796.18_0	chr7	+	2110	12	FSM	ENSMUSG00000030796.18	ENSMUST00000033060.14	2140	12	2	28	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44865178	44883040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44865257_44866636_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_18	chr7	+	3323	11	FSM	ENSMUSG00000030796.18	ENSMUST00000107801.10	3396	11	70	3	70	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44865345	44883040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44866875_44867504_44867570_44868567_44868631_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_24	chr7	+	1346	11	ISM	ENSMUSG00000030796.18	ENST00000593945.6	1427	12	1418	5	1	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGGAGCCCCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	44866635	44882347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_44866875_44867504_44867570_44868567_44868637_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030796.18_7	chr7	+	1416	12	FSM	ENSMUSG00000030796.18	ENST00000593945.6	1427	12	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGGAGCCCCCGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	44865223	44882347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44865295_44866636_44866875_44867504_44867570_44868567_44868637_44869861_44869970_44870066_44870126_44873104_44873170_44875076_44875220_44878062_44878237_44880732_44880895_44881606_44881760_44882238
ENSMUSG00000030801.11_0	chr7	+	1562	11	FSM	ENSMUSG00000030801.11	ENSMUST00000033070.9	1579	11	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATTGATTCCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	127511699	127525004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127511915_127514399_127514475_127514550_127514727_127519407_127519462_127519593_127519759_127521330_127521421_127523549_127523691_127523775_127523870_127523967_127524119_127524280_127524436_127524758
ENSMUSG00000030802.15_0	chr7	+	3392	12	FSM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACCAGTTTTTCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	127503257	127509384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127503342_127503934_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUSG00000030802.15_12	chr7	+	1781	10	FSM	ENSMUSG00000030802.15	ENSMUST00000124533.3	1792	10	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCCTCTTGGGCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	127503938	127507774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092
ENSMUSG00000030802.15_9	chr7	+	3311	11	ISM	ENSMUSG00000030802.15	ENSMUST00000071056.14	3405	12	680	7	0	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTTTTTCCTAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	127503933	127509386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127504298_127504393_127504463_127504541_127504653_127504920_127504969_127505044_127505165_127505243_127505343_127505520_127505595_127506390_127506520_127506613_127506704_127507092_127507252_127507338
ENSMUSG00000030804.9_0	chr7	-	737	3	FSM	ENSMUSG00000096145.3	ENSMUST00000033074.8	748	3	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTGTAGCATATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127494780	127492236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127492664_127493676_127493787_127494580
ENSMUSG00000030805.15_0	chr7	+	1450	11	FSM	ENSMUSG00000030805.15	ENSMUST00000033075.14	1456	11	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCAGCTGTGCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	127440939	127448189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740_127447840_127447922
ENSMUSG00000030805.15_2	chr7	+	1263	10	FSM	ENSMUSG00000030805.15	ENSMUST00000121705.8	1316	10	7	46	7	-46	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127441146	127448126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127441241_127441435_127441538_127441616_127441717_127441855_127441931_127442743_127442815_127445191_127445301_127445371_127445449_127445659_127445798_127447559_127447671_127447740
ENSMUSG00000030811.15_0	chr7	+	3162	11	FSM	ENSMUSG00000030811.15	ENSMUST00000186207.7	3178	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGGGACTCCTCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	127344380	127368091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127344505_127347421_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350199_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUSG00000030811.15_1	chr7	+	3632	11	FSM	ENSMUSG00000030811.15	ENSMUST00000186116.7	3641	11	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCTAGCCGGGGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	127344959	127368641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127345040_127347459_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350201_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUSG00000030811.15_2	chr7	+	3442	10	FSM	ENSMUSG00000030811.15	ENSMUST00000206893.2	3449	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGACTTTTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127347452	127368655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350070_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUSG00000030811.15_4	chr7	+	3553	10	ISM	ENSMUSG00000030811.15	ENSMUST00000186116.7	3641	11	2499	9	11	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAATCTAGCCGGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	127347456	127368639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127347623_127348881_127349026_127349152_127349240_127349319_127349539_127350036_127350201_127351181_127351694_127360423_127360588_127361611_127361774_127366616_127366836_127366923
ENSMUSG00000030814.18_0	chr7	-	888	6	FSM	ENSMUSG00000030814.18	ENSMUST00000205977.2	891	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCAGTCATTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	127307811	127265970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127266219_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUSG00000030814.18_1	chr7	-	1121	6	FSM	ENSMUSG00000030814.18	ENSMUST00000061468.9	1132	6	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTGTCATGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	127308096	127304151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127304348_127304898_127304985_127306347_127306510_127306604_127306714_127307051_127307131_127307607
ENSMUSG00000030815.12_0	chr7	+	1558	10	FSM	ENSMUSG00000030815.12	ENSMUST00000033086.8	1570	10	4	8	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	127172579	127182471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127172629_127173025_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000030815.12_1	chr7	+	1501	9	FSM	ENSMUSG00000030815.12	ENSMUST00000121004.3	1840	9	333	6	333	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGTGCCATGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	127173033	127182471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127173139_127176706_127176883_127177146_127177202_127178838_127178905_127178981_127179146_127181294_127181386_127181465_127181620_127181690_127181817_127181907
ENSMUSG00000030816.9_0	chr7	+	5275	20	FSM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTGTGCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127187939	127203968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127187984_127188096_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUSG00000030816.9_6	chr7	+	3900	18	FSM	ENSMUSG00000030816.9	ENSMUST00000033088.8	3906	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCTAGGCTGCAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	127188090	127202751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUSG00000030816.9_7	chr7	+	5218	19	ISM	ENSMUSG00000030816.9	ENSMUST00000205694.2	5279	20	171	3	19	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTGTGCTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	127188109	127203968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127188301_127188683_127188852_127188928_127189071_127189678_127189886_127190486_127190609_127190704_127190852_127190934_127191010_127191760_127191881_127191968_127192149_127193778_127193915_127195017_127195140_127195226_127195655_127195736_127195855_127195975_127196126_127196300_127196514_127196588_127196715_127199477_127199619_127199696_127199799_127201638
ENSMUSG00000030822.16_0	chr7	+	2168	13	FSM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	0	7	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTTCTGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127069542	127075924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127069596_127070156_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030822.16_2	chr7	+	2117	12	ISM	ENSMUSG00000030822.16	ENSMUST00000106292.8	2175	13	612	7	-507	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTTCTGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127070154	127075924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127070292_127071077_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030822.16_3	chr7	+	2382	11	FSM	ENSMUSG00000030822.16	ENSMUST00000033095.10	2402	11	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATATGTTTCTGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127070675	127075924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127071150_127071269_127071439_127072766_127072889_127072968_127073159_127073550_127073595_127073685_127073892_127074223_127074798_127074928_127074999_127075078_127075171_127075393_127075466_127075555
ENSMUSG00000030824.18_0	chr7	-	4842	13	FSM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGCAGGTTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	45159825	45139887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129_45159272_45159746
ENSMUSG00000030824.18_12	chr7	-	1300	12	FSM	ENSMUSG00000030824.18	ENST00000407032.5	1310	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACCTGGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45152699	45141330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45141356_45143223_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601
ENSMUSG00000030824.18_2	chr7	-	4765	12	ISM	ENSMUSG00000030824.18	ENSMUST00000211765.2	4853	13	557	6	477	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACAGCAGGTTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	45159273	45139887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_45143374_45143540_45143638_45144041_45144213_45144476_45144570_45144645_45144739_45144978_45145038_45147823_45147915_45148148_45148335_45149225_45149330_45151006_45151140_45152601_45152710_45159129
ENSMUSG00000030825.20_0	chr7	+	1385	9	FSM	ENSMUSG00000030825.20	ENSMUST00000107752.12	1400	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATACCTTGGAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	45204324	45216738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45204491_45205478_45205518_45205736_45205820_45207031_45207099_45208804_45208897_45212338_45212444_45215378_45215447_45215543_45215641_45216070
ENSMUSG00000030826.20_0	chr7	+	1749	11	FSM	ENSMUSG00000030826.20	ENSMUST00000033098.16	1772	11	11	12	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	45219587	45239123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234534_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUSG00000030826.20_1	chr7	+	1525	11	FSM	ENSMUSG00000030826.20	ENSMUST00000120864.10	1536	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	45219796	45239123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45219824_45224854_45224930_45225222_45225427_45234340_45234452_45234549_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUSG00000030826.20_2	chr7	+	1491	10	ISM	ENSMUSG00000030826.20	ENSMUST00000120864.10	1536	11	5065	11	2569	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAGACATTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	45224861	45239123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45224930_45225222_45225427_45234340_45234452_45234549_45234655_45234837_45235002_45237072_45237216_45237358_45237445_45237662_45237804_45237877_45237953_45238729
ENSMUSG00000030827.6_0	chr7	-	937	3	FSM	ENSMUSG00000030827.6	ENSMUST00000033099.6	951	3	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGAGATATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	45264900	45263309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45263735_45264289_45264394_45264492
ENSMUSG00000030834.8_2	chr7	-	1196	8	FSM	ENSMUSG00000030834.8	ENST00000546162.6	1216	8	11	9	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGTGAGCGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	45678584	45663500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45663671_45664837_45665018_45665802_45665939_45666897_45666960_45667988_45668115_45669561_45669691_45669964_45670185_45678411
ENSMUSG00000030834.8_3	chr7	-	1103	8	FSM	ENSMUSG00000030834.8	ENST00000565566.1	1121	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAAGGTGAGCGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	45678585	45663500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45663671_45664837_45665018_45665802_45665939_45666897_45666960_45667988_45668115_45669561_45669691_45669964_45670091_45678411
ENSMUSG00000030835.7_0	chr7	+	4230	31	FSM	ENSMUSG00000030835.7	ENSMUST00000033121.7	4257	31	21	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGGCATAGTGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	45683142	45733630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUSG00000030835.7_17	chr7	+	3904	30	FSM	ENSMUSG00000030835.7	ENST00000677260.1	3923	30	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAAACATGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	45683171	45733471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUSG00000030835.7_25	chr7	+	3482	30	FSM	ENSMUSG00000030835.7	ENST00000610363.4	3506	30	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACAGAAGACCAGACG	NA	NA	NA	NA	NA	NA	NA	NA	45683284	45733131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45732658_45732752_45733026
ENSMUSG00000030835.7_4	chr7	+	3965	30	FSM	ENSMUSG00000030835.7	ENST00000678192.1	3984	30	12	7	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAGGAAACATGGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	45683155	45733471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45683397_45686982_45687073_45687966_45688013_45690892_45690994_45691955_45692063_45693654_45693728_45694684_45694838_45695272_45695411_45696332_45696423_45699693_45699800_45699969_45700121_45703925_45704101_45706018_45706161_45706500_45706633_45707839_45707977_45710302_45710391_45711192_45711257_45712390_45712487_45715585_45715805_45715883_45715967_45717802_45717963_45718095_45718223_45719346_45719461_45720198_45720327_45721921_45722064_45725498_45725583_45727449_45727561_45728914_45729017_45730818_45730939_45733026
ENSMUSG00000030839.13_1	chr7	-	1456	11	FSM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTTCTGGCAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	46289226	46092581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844_46284981_46289136
ENSMUSG00000030839.13_2	chr7	-	1367	10	ISM	ENSMUSG00000030839.13	ENSMUST00000033127.12	1465	11	4250	4	4250	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCTTCTGGCAGATTA	NA	NA	NA	NA	NA	NA	NA	NA	46284981	46092581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_46092960_46165091_46165129_46240030_46240198_46264041_46264201_46268119_46268183_46270984_46271099_46275632_46275694_46282083_46282179_46283178_46283335_46284844
ENSMUSG00000030842.13_0	chr7	+	1109	5	FSM	ENSMUSG00000030842.13	ENSMUST00000033131.12	1119	5	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTGTCCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101555118	101561108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101555248_101558870_101559017_101559235_101559314_101559626_101559754_101560479
ENSMUSG00000030844.12_0	chr7	-	863	5	FSM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	8	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGAACCCTTTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	128019889	127975353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082_128006202_128019789
ENSMUSG00000030844.12_2	chr7	-	760	4	ISM	ENSMUSG00000030844.12	ENSMUST00000033133.12	880	5	13695	13	13685	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACAAGTGAACCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	128006202	127975357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_127975767_127990687_127990832_128004893_128004981_128006082
ENSMUSG00000030846.16_0	chr7	-	4430	12	FSM	ENSMUSG00000030846.16	ENSMUST00000106226.9	4451	12	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTGGCTTTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	128063381	128041506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050495_128056659_128056757_128062848
ENSMUSG00000030846.16_2	chr7	-	1566	12	FSM	ENSMUSG00000030846.16	ENSMUST00000033135.9	1580	12	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACAATTCTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	128063076	128044014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_128044384_128045530_128045671_128046004_128046129_128046336_128046422_128046535_128046632_128047374_128047484_128047918_128047995_128049844_128049933_128050065_128050121_128050344_128050444_128056659_128056757_128062848
ENSMUSG00000030847.9_0	chr7	+	2539	4	FSM	ENSMUSG00000030847.9	ENSMUST00000033136.9	2562	4	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTCAAAATGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128125351	128148694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_128125769_128141696_128142036_128143530_128143933_128147313
ENSMUSG00000030849.19_0	chr7	-	3362	13	FSM	ENSMUSG00000030849.19	ENST00000682772.1	3374	13	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGCTTATTTTTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	129811411	129764199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129811250
ENSMUSG00000030849.19_15	chr7	-	2882	15	FSM	ENSMUSG00000030849.19	ENST00000369060.8	2903	15	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACGAAACGATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	129863725	129765062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129802712_129802904_129820727_129820852_129830352_129830523_129842929_129843008_129844107_129844375_129863478
ENSMUSG00000030849.19_3	chr7	-	4184	16	FSM	ENSMUSG00000030849.19	ENST00000684153.1	4203	16	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGTTAACAAGACAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	129867885	129764225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129765946_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030849.19_6	chr7	-	3519	16	FSM	ENSMUSG00000030849.19	ENST00000356226.8	3528	16	9	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATGGTGTTTTGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	129867987	129764900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129765854_129769432_129769539_129771468_129771607_129773341_129773413_129774546_129774670_129779404_129779596_129782094_129782206_129784370_129784493_129786958_129787111_129797907_129798105_129800148_129800294_129802712_129802904_129820727_129820852_129830352_129830523_129863478_129863740_129867523
ENSMUSG00000030850.18_1	chr7	-	4649	12	FSM	ENSMUSG00000030850.18	ENSMUST00000035458.15	4685	12	18	18	18	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACTAACAATAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	130121242	129993240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUSG00000030850.18_2	chr7	-	4694	12	FSM	ENSMUSG00000030850.18	ENSMUST00000033139.15	4735	12	20	21	20	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATACTAACAATAA	NA	NA	NA	NA	NA	NA	NA	NA	130121290	129993243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130106423_130106553_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121085
ENSMUSG00000030850.18_8	chr7	-	2039	12	ISM	ENSMUSG00000030850.18	ENST00000540606.6	2132	13	3801	0	3292	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTAGTGTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	130117899	129995477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_129995710_129995926_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834
ENSMUSG00000030850.18_9	chr7	-	2125	13	FSM	ENSMUSG00000030850.18	ENST00000540606.6	2132	13	7	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCACTAGTGTTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	130121693	129995477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_129995710_129995926_129996467_130020177_130020299_130065860_130065961_130068985_130069168_130083412_130083446_130105451_130105581_130109211_130109430_130110736_130110989_130112540_130112645_130115491_130115555_130117834_130117899_130121606
ENSMUSG00000030851.16_0	chr7	+	801	6	FSM	ENSMUSG00000030851.16	ENST00000536880.5	823	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATCTGCAGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46515844	46527283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46515951_46519064_46519197_46522335_46522510_46525099_46525218_46525897_46526022_46527136
ENSMUSG00000030851.16_2	chr7	+	546	4	FSM	ENSMUSG00000030851.16	ENST00000546146.5	567	4	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATCTGCAGTTATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	46515843	46527283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46515951_46522335_46522510_46525099_46525218_46527136
ENSMUSG00000030852.19_12	chr7	+	3615	17	FSM	ENSMUSG00000030852.19	ENST00000369004.7	3627	17	11	1	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130294520	130366514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130333260_130333297_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_22	chr7	+	3596	17	FSM	ENSMUSG00000030852.19	ENST00000260733.7	3606	17	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCGAGTGTGGCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	130294591	130366512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_31	chr7	+	3314	14	FSM	ENSMUSG00000030852.19	ENST00000369001.5	3323	14	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130318438	130366514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130318570_130330173_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_37	chr7	+	3467	16	FSM	ENSMUSG00000030852.19	ENST00000513429.5	3475	16	7	1	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130318437	130366514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130346256_130346347_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030852.19_6	chr7	+	3898	16	FSM	ENSMUSG00000030852.19	ENST00000360561.7	3908	16	9	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGAGTGTGGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130294201	130366514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130294718_130318432_130318570_130330252_130331559_130335235_130335297_130336678_130336881_130341541_130341604_130342569_130342686_130343859_130344032_130345273_130345415_130352919_130353064_130353563_130353641_130355347_130355392_130360894_130361056_130361263_130361371_130361644_130361766_130365983
ENSMUSG00000030854.18_0	chr7	-	3138	14	FSM	ENSMUSG00000030854.18	ENSMUST00000033142.13	3145	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAACTAGCCTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	46782465	46727552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46728667_46728993_46729108_46729194_46729356_46731610_46731722_46732508_46732647_46732833_46732914_46735788_46735874_46738237_46738428_46739524_46739767_46740168_46740253_46740474_46740583_46741124_46741319_46762468_46762546_46782025
ENSMUSG00000030861.16_0	chr7	+	6066	11	FSM	ENSMUSG00000030861.16	ENSMUST00000015829.15	6081	11	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131012342	131050671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_131012517_131026200_131026361_131027503_131027605_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030861.16_11	chr7	+	1170	9	FSM	ENSMUSG00000030861.16	ENST00000368869.8	1178	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTCACTGACAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	131026206	131046056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_131026361_131030157_131030365_131031675_131031847_131033665_131033792_131035998_131036092_131039130_131039221_131042930_131043069_131045197_131045298_131045965
ENSMUSG00000030867.8_0	chr7	+	2181	10	FSM	ENSMUSG00000030867.8	ENSMUST00000033154.8	2199	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCTCTCTCTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121758672	121769089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121759174_121759758_121759928_121760729_121760875_121761615_121761710_121763242_121763463_121766819_121766976_121767788_121767867_121768051_121768207_121768303_121768487_121768609
ENSMUSG00000030868.7_0	chr7	+	1515	6	FSM	ENSMUSG00000030868.7	ENSMUST00000033156.5	1532	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCCTGGTTTAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	121732272	121748259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121732405_121733391_121733461_121734274_121734394_121737470_121737583_121743007_121743111_121747279
ENSMUSG00000030869.12_0	chr7	-	3466	5	FSM	ENSMUSG00000030869.12	ENSMUST00000033157.10	3479	5	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTATATAAGCAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121701107	121684636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121687562_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030869.12_1	chr7	-	1398	5	FSM	ENSMUSG00000030869.12	ENSMUST00000123296.8	1416	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACAGATTTTGTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121701064	121689286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121690187_121690808_121690909_121692839_121692928_121695831_121695955_121700877
ENSMUSG00000030870.13_0	chr7	+	4831	7	FSM	ENSMUSG00000030870.13	ENSMUST00000033158.6	4849	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTAATTGTGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	121666407	121681409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121670924_121670991_121671132_121671239_121675330_121675414_121677672
ENSMUSG00000030870.13_2	chr7	+	636	4	FSM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAATATGCATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121666666	121668352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121666708_121666886_121667217_121668003_121668213_121668296
ENSMUSG00000030870.13_6	chr7	+	588	3	ISM	ENSMUSG00000030870.13	ENST00000567264.1	641	4	227	5	227	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAATATGCATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121666893	121668352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_121667217_121668003_121668213_121668296
ENSMUSG00000030871.12_0	chr7	-	2024	9	FSM	ENSMUSG00000030871.12	ENSMUST00000033159.4	2046	9	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGTATGGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121666473	121638052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121638382_121638934_121639071_121643524_121643656_121643735_121643890_121645846_121645956_121647324_121647798_121654781_121654972_121662151_121662308_121666127
ENSMUSG00000030872.15_0	chr7	-	4907	17	FSM	ENSMUSG00000030872.15	ENSMUST00000033160.15	4915	17	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTAGTGTCACTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121620438	121585945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121589025_121589646_121589758_121590716_121590887_121594066_121594225_121596513_121596645_121596983_121597013_121597285_121597376_121598080_121598207_121599341_121599424_121601297_121601436_121601889_121601971_121603109_121603211_121606479_121606604_121607553_121607653_121609905_121609982_121611371_121611457_121620211
ENSMUSG00000030873.10_0	chr7	+	1827	12	FSM	ENSMUSG00000030873.10	ENST00000568923.5	1843	12	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGATCCCCACCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	121498464	121517276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121498773_121501497_121501766_121502003_121502114_121509622_121509727_121511188_121511353_121511627_121511736_121513434_121513553_121514493_121514570_121514948_121515007_121515748_121515811_121516722_121516799_121516901
ENSMUSG00000030876.8_0	chr7	+	1807	5	FSM	ENSMUSG00000030876.8	ENSMUST00000033163.8	1823	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACTCTGGCACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	120633677	120676052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120634199_120647060_120647252_120651309_120651520_120656437_120656623_120675352
ENSMUSG00000030877.12_0	chr7	+	1073	3	FSM	ENSMUSG00000030877.12	ENST00000420133.2	1087	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGTAAGTAAATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120588216	120594752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120588359_120590352_120591134_120594602
ENSMUSG00000030878.12_0	chr7	-	2497	5	FSM	ENSMUSG00000030878.12	ENSMUST00000033169.9	2525	5	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAACAAATGGGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	120581519	120556270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_120558021_120559314_120559480_120559732_120559882_120569548_120569662_120581199
ENSMUSG00000030879.11_0	chr7	-	7280	3	FSM	ENSMUSG00000030879.11	ENSMUST00000124482.3	7300	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2558	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAAGCTACTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	105460296	105452422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105459352_105459656_105459726_105460014
ENSMUSG00000030880.15_0	chr7	+	3002	20	FSM	ENSMUSG00000030880.15	ENST00000615879.4	3016	20	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGAAAATGTGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120516980	120545507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120517134_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ENSMUSG00000030880.15_14	chr7	+	2500	20	FSM	ENSMUSG00000030880.15	ENST00000418581.6	2514	20	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGCCAACATAGTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120517032	120545095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120517134_120522121_120522192_120526223_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ENSMUSG00000030880.15_6	chr7	+	4184	21	FSM	ENSMUSG00000030880.15	ENSMUST00000033173.15	4194	21	6	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAGTCTTCAGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	120517012	120546651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543769_120543896_120544698
ENSMUSG00000030880.15_9	chr7	+	2440	21	FSM	ENSMUSG00000030880.15	ENST00000564209.5	2452	21	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAATTTGAAATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	120517015	120544973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120517134_120522121_120522192_120523444_120523496_120526166_120526245_120527110_120527227_120527650_120527734_120530101_120530210_120530483_120530534_120531356_120531477_120532529_120532616_120532908_120532954_120533055_120533148_120533995_120534117_120536825_120536908_120538218_120538279_120538361_120538520_120538971_120539034_120539524_120540049_120541712_120541791_120543832_120543896_120544698
ENSMUSG00000030881.16_0	chr7	-	3259	8	FSM	ENSMUSG00000030881.16	ENSMUST00000131446.8	3275	8	10	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTTTTTATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	105289613	105283415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000030881.16_11	chr7	-	836	7	FSM	ENSMUSG00000030881.16	ENST00000525235.1	851	7	5	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGACCATGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	105289529	105286380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105286486_105286858_105286933_105287025_105287248_105287415_105287535_105288215_105288313_105288531_105288673_105289451
ENSMUSG00000030881.16_12	chr7	-	759	6	ISM	ENSMUSG00000030881.16	ENST00000525235.1	851	7	861	10	850	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGACCATGGAAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	105288673	105286380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_105286486_105286858_105286933_105287025_105287248_105287415_105287535_105288215_105288313_105288531
ENSMUSG00000030881.16_3	chr7	-	1314	6	FSM	ENSMUSG00000030881.16	ENST00000445086.6	1320	6	6	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAATAGTGTTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	105289557	105285044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105288215_105288313_105289451
ENSMUSG00000030881.16_6	chr7	-	1392	7	FSM	ENSMUSG00000030881.16	ENST00000423813.6	1404	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTATCCCCAGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	105289610	105285138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105285601_105286017_105286193_105286327_105286486_105287025_105287248_105287415_105287535_105288215_105288313_105289451
ENSMUSG00000030882.20_0	chr7	+	14521	44	FSM	ENSMUSG00000030882.20	ENSMUST00000145988.9	14536	44	9	6	9	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCAAGAATGACTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	105300042	105371000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105300149_105300278_105300479_105300708_105301514_105304828_105304991_105306093_105306298_105306380_105306492_105317652_105317810_105322996_105323252_105323357_105323496_105323626_105323679_105327000_105327264_105327353_105327598_105331985_105332144_105332839_105332966_105333054_105333332_105334923_105335052_105335147_105335347_105335700_105335796_105336384_105336593_105341848_105341975_105342319_105342418_105342527_105345406_105345604_105345771_105345929_105346123_105346363_105346653_105352244_105353854_105354026_105354236_105354453_105354659_105354730_105354834_105357688_105357839_105358074_105358258_105358367_105358800_105358953_105359417_105361693_105361994_105362190_105362344_105362521_105362701_105362821_105363791_105364000_105364185_105364383_105364498_105364584_105364784_105369078_105369171_105369318_105369469_105369666_105370479_105370623
ENSMUSG00000030884.13_0	chr7	+	1885	14	FSM	ENSMUSG00000030884.13	ENSMUST00000033176.7	1896	14	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATCCTCTCAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120234408	120258746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120234546_120236884_120236969_120237070_120237221_120239456_120239522_120240901_120240959_120242248_120242374_120244373_120244472_120248568_120248627_120250056_120250153_120250407_120250608_120253203_120253285_120255323_120255401_120256739_120256894_120258243
ENSMUSG00000030888.15_0	chr7	-	3036	7	FSM	ENSMUSG00000030888.15	ENSMUST00000033179.14	3053	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGCCAGAAGGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	105385980	105380945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105382351_105382558_105382656_105382738_105382846_105382974_105383105_105383206_105383661_105383896_105384264_105385504
ENSMUSG00000030889.15_0	chr7	+	3324	29	FSM	ENSMUSG00000030889.15	ENST00000389398.10	3338	29	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGTGAACGACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120339278	120399687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120339431_120351757_120351882_120358074_120358200_120358303_120358382_120361637_120361693_120366378_120366478_120367347_120367455_120371351_120371478_120372159_120372269_120372456_120372523_120374598_120374725_120375222_120375359_120375462_120375567_120377621_120377703_120378067_120378163_120379347_120379468_120381566_120381642_120381812_120381958_120383191_120383388_120385646_120385718_120389277_120389428_120390896_120390988_120391593_120391702_120392548_120392647_120393388_120393527_120394803_120394913_120398231_120398377_120398727_120398877_120399541
ENSMUSG00000030889.15_6	chr7	+	434	3	FSM	ENSMUSG00000030889.15	ENST00000563755.1	449	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGTGAACGACAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120398237	120399687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120398377_120398727_120398877_120399541
ENSMUSG00000030890.17_0	chr7	+	1775	13	FSM	ENSMUSG00000030890.17	ENSMUST00000033182.10	1795	13	10	10	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAACAGGCTCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	105385808	105392122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_11	chr7	+	1791	12	FSM	ENSMUSG00000030890.17	ENST00000537806.5	1803	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATCAGCCCCGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	105385849	105392087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105385924_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_15	chr7	+	1743	13	FSM	ENSMUSG00000030890.17	ENST00000299421.9	1755	13	2	10	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAAAACAGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	105385875	105392119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105385930_105386275_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_19	chr7	+	1735	13	FSM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	4	10	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAAAACAGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	105385935	105392119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105386014_105386307_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_28	chr7	+	1658	12	ISM	ENSMUSG00000030890.17	ENSMUST00000163389.9	1749	13	375	10	2	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAAAACAGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	105386306	105392119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_105386445_105389383_105389550_105389719_105389816_105389977_105390075_105390166_105390251_105390354_105390441_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030890.17_33	chr7	+	1466	10	FSM	ENSMUSG00000030890.17	ENST00000528995.5	1483	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGAAAACAGGCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	105386315	105392119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105386445_105389383_105389550_105389719_105389816_105390166_105390251_105390580_105390691_105390786_105390915_105390993_105391116_105391203_105391304_105391413_105391545_105391719
ENSMUSG00000030894.6_0	chr7	-	3545	13	FSM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAAAAGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105401440	105394028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188_105401261_105401377
ENSMUSG00000030894.6_1	chr7	-	3479	12	ISM	ENSMUSG00000030894.6	ENSMUST00000033184.6	3558	13	186	10	29	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAAGTCTGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	105401256	105394027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399066_105399195_105399386_105399538_105400796_105400937_105401188
ENSMUSG00000030894.6_8	chr7	-	1873	12	FSM	ENSMUSG00000030894.6	ENST00000642892.1	1886	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCTCACCCCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	105401278	105395602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105399119_105399195_105399386_105399538_105400796_105400937_105401188
ENSMUSG00000030894.6_9	chr7	-	1547	9	FSM	ENSMUSG00000030894.6	ENST00000644810.1	1563	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTCTCACCCCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	105400926	105395602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105395980_105396149_105396276_105396593_105396753_105396865_105396987_105397788_105397859_105398089_105398279_105398431_105398631_105398743_105398920_105400796
ENSMUSG00000030897.6_0	chr7	+	635	4	FSM	ENSMUSG00000030897.6	ENST00000533426.5	642	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAACTGGTAGGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	105054102	105056367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105054198_105054376_105054484_105055261_105055335_105056007
ENSMUSG00000030898.16_0	chr7	+	1703	4	FSM	ENSMUSG00000030898.16	ENST00000532715.5	1712	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTCTTCCCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	105075149	105085158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105075383_105083201_105083452_105083726_105083885_105084096
ENSMUSG00000030898.16_2	chr7	+	1867	5	FSM	ENSMUSG00000030898.16	ENST00000334619.7	1876	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCCTCTTCCCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	105075237	105085158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105075383_105082789_105083042_105083201_105083452_105083726_105083885_105084096
ENSMUSG00000030917.14_0	chr7	+	1474	5	FSM	ENSMUSG00000030917.14	ENSMUST00000033210.13	1484	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTTTTCTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119701585	119720209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119701739_119703852_119704053_119714608_119714778_119715442_119715582_119719396
ENSMUSG00000030917.14_3	chr7	+	508	3	ISM	ENSMUSG00000030917.14	ENST00000261388.7	541	4	16	3835	16	-3835	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATACACGTCAATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	119703853	119715582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_119704053_119714608_119714778_119715442
ENSMUSG00000030917.14_4	chr7	+	523	4	FSM	ENSMUSG00000030917.14	ENST00000261388.7	541	4	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCCAACGTCGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	119703851	119719413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119704053_119714608_119714778_119715442_119715582_119719399
ENSMUSG00000030922.13_0	chr7	+	770	5	FSM	ENSMUSG00000030922.13	ENST00000568663.5	789	5	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	4231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGAAGCAAAACTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	119494495	119515556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119494582_119494874_119495114_119509026_119509186_119513395_119513489_119515363
ENSMUSG00000030922.13_7	chr7	+	686	4	FSM	ENSMUSG00000030922.13	ENSMUST00000106518.9	875	4	-211	400	-211	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAGAAGCAAAACTACTAC	NA	NA	NA	NA	NA	NA	NA	NA	119494872	119515556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119495114_119509026_119509186_119513395_119513489_119515363
ENSMUSG00000030924.17_14	chr7	+	2199	17	FSM	ENSMUSG00000030924.17	ENST00000261377.11	2214	17	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACATGCAATGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	119398795	119448058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424866_119427213_119427430_119431893_119431999_119433486_119433625_119442464_119442558_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ENSMUSG00000030924.17_22	chr7	+	2105	16	FSM	ENSMUSG00000030924.17	ENST00000348433.10	2121	16	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCACATGCAATGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	119398796	119448058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119398901_119400452_119400580_119401963_119402061_119404365_119404510_119417605_119417695_119418654_119418771_119422978_119423118_119423267_119423363_119424758_119424866_119427213_119427430_119431893_119431999_119433486_119433625_119443070_119443288_119443481_119443670_119444605_119444725_119447954
ENSMUSG00000030929.18_1	chr7	-	3548	9	FSM	ENSMUSG00000030929.18	ENSMUST00000150844.3	3564	9	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTAGAACATCAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	119393275	119383063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_119385768_119385961_119386051_119386626_119386709_119386956_119387058_119389456_119389614_119390323_119390452_119391487_119391572_119391653_119391722_119393140
ENSMUSG00000030930.15_0	chr7	-	5031	8	FSM	ENSMUSG00000030930.15	ENSMUST00000077472.10	5041	8	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTGCTGGCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	131918438	131837513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_131840194_131843145_131843294_131849592_131849750_131864411_131864569_131868385_131868533_131870647_131870988_131871733_131872731_131918033
ENSMUSG00000030930.15_1	chr7	-	4792	8	FSM	ENSMUSG00000030930.15	ENSMUST00000080215.6	4813	8	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTGCTGGCCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	131918941	131837513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_131840194_131843145_131843294_131849592_131849750_131864411_131864569_131868385_131868533_131870647_131870988_131871733_131872731_131918775
ENSMUSG00000030934.10_0	chr7	-	2144	10	FSM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGATGTGAATCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	132178120	132159207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634_132171870_132178023
ENSMUSG00000030934.10_1	chr7	-	2050	9	ISM	ENSMUSG00000030934.10	ENSMUST00000084500.8	2152	10	6255	1	-39	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGATGTGAATCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	132171872	132159207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_132160060_132161374_132161520_132162480_132162595_132163512_132163642_132164315_132164439_132165935_132166064_132168497_132168594_132168794_132169020_132171634
ENSMUSG00000030934.10_7	chr7	-	601	5	FSM	ENSMUSG00000030934.10	ENST00000445444.1	615	5	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGGCTTGCCCCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	132171825	132159985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132160060_132161374_132161464_132162480_132162595_132163512_132163642_132171630
ENSMUSG00000030942.9_0	chr7	-	2673	4	FSM	ENSMUSG00000030942.9	ENSMUST00000033236.9	2689	4	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTTGGCATTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119320008	119314318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_119316293_119317244_119317494_119318349_119318525_119319733
ENSMUSG00000030946.14_1	chr7	+	578	5	FSM	ENSMUSG00000030946.14	ENST00000368839.1	598	5	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTGACCAGCCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	132232220	132307409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_132232399_132235729_132235884_132243252_132243317_132244215_132244309_132307320
ENSMUSG00000030954.12_0	chr7	-	1525	8	FSM	ENSMUSG00000030954.12	ENST00000302555.10	1534	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCCATCCTTCAGTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	119053833	119041953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_119042096_119046331_119046425_119048200_119048364_119049282_119049529_119050722_119050872_119051355_119051568_119052066_119052178_119053424
ENSMUSG00000030956.16_0	chr7	-	5437	5	FSM	ENSMUSG00000030956.16	ENSMUST00000097999.9	5465	5	22	6	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	132415235	132313816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132414794
ENSMUSG00000030956.16_1	chr7	-	5046	5	FSM	ENSMUSG00000030956.16	ENSMUST00000065371.14	5052	5	2	4	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	132388646	132313816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864_132381115_132388596
ENSMUSG00000030956.16_2	chr7	-	4993	4	ISM	ENSMUSG00000030956.16	ENSMUST00000065371.14	5052	5	7537	4	-2466	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	132381111	132313816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_132317732_132361117_132361897_132373306_132373359_132380864
ENSMUSG00000030956.16_3	chr7	-	4317	4	FSM	ENSMUSG00000030956.16	ENSMUST00000097998.9	4341	4	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCCGGCTGCCTGCGCA	NA	NA	NA	NA	NA	NA	NA	NA	132415591	132313816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132317732_132373306_132373359_132380864_132381115_132415491
ENSMUSG00000030956.16_6	chr7	-	1254	4	FSM	ENSMUSG00000030956.16	ENSMUST00000106166.8	1270	4	16	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132388648	132360996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132361897_132373306_132373359_132380864_132381115_132388596
ENSMUSG00000030960.17_0	chr7	-	1088	6	FSM	ENSMUSG00000030960.17	ENSMUST00000033257.15	1107	6	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATAGAAAGAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	132454398	132429200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132429612_132433088_132433306_132438828_132438937_132452323_132452439_132453154_132453221_132454227
ENSMUSG00000030965.20_0	chr7	+	2878	9	FSM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGATACGATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	132460959	132486832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_132461063_132466691_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030965.20_1	chr7	+	2775	8	ISM	ENSMUSG00000030965.20	ENSMUST00000084497.12	2892	9	5738	8	5738	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATGATACGATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	132466691	132486832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_132466783_132470761_132470799_132473300_132473368_132476555_132476747_132478326_132478447_132480257_132480343_132482495_132482611_132484763
ENSMUSG00000030966.14_0	chr7	-	2766	8	FSM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	27	0	-14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTTCTTTCATTCTACC	NA	NA	NA	NA	NA	NA	NA	NA	102214666	102207127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478_102213548_102214595
ENSMUSG00000030966.14_2	chr7	-	2691	7	ISM	ENSMUSG00000030966.14	ENSMUST00000033264.12	2793	8	1143	7	1102	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCCTGAGCTTCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	102213550	102207134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_102208871_102209174_102209276_102209799_102209823_102210994_102211226_102212472_102212569_102212900_102213333_102213478
ENSMUSG00000030967.16_0	chr7	+	4986	10	FSM	ENSMUSG00000030967.16	ENSMUST00000106157.8	5008	10	15	7	15	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCACACCATGGATTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	132532885	132588113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_132533275_132551313_132552165_132568235_132568424_132572914_132573069_132574418_132574491_132575153_132575353_132583009_132583131_132584099_132584230_132584411_132584642_132585461
ENSMUSG00000030970.17_0	chr7	-	3550	9	FSM	ENSMUSG00000030970.17	ENSMUST00000169570.8	3604	9	11	43	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	132616966	132589349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132615246
ENSMUSG00000030970.17_1	chr7	-	1958	10	FSM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	0	39	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	132724895	132589351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485_132683590_132724869
ENSMUSG00000030970.17_2	chr7	-	1922	9	ISM	ENSMUSG00000030970.17	ENSMUST00000166439.8	1997	10	41314	41	41314	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATACAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132683581	132589353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132683485
ENSMUSG00000030970.17_3	chr7	-	2302	11	FSM	ENSMUSG00000030970.17	ENSMUST00000033269.15	2321	11	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATACAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132725081	132589353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132724869
ENSMUSG00000030970.17_4	chr7	-	2002	11	FSM	ENSMUSG00000030970.17	ENST00000411419.6	2014	11	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATCCCCTGGGCACAGC	NA	NA	NA	NA	NA	NA	NA	NA	132725581	132589636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_132590081_132591718_132591837_132592159_132592288_132592767_132592899_132593290_132593506_132596887_132597095_132600535_132600681_132600919_132601075_132627441_132627602_132683485_132683590_132725386
ENSMUSG00000030972.7_0	chr7	+	1628	13	FSM	ENSMUSG00000030972.7	ENST00000331849.8	1644	13	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGAGAGATGCTGCG	NA	NA	NA	NA	NA	NA	NA	NA	119127778	119142026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119127862_119129490_119129706_119130995_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827_119139956_119140033_119140134_119141539_119141660_119141937
ENSMUSG00000030972.7_9	chr7	+	1541	12	ISM	ENSMUSG00000030972.7	ENST00000331849.8	1644	13	1720	12	1720	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAACCCAAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	119129488	119142020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_119129706_119130995_119131204_119133456_119133601_119133984_119134139_119134961_119135042_119136428_119136553_119137307_119137389_119137510_119137613_119139827_119139956_119140033_119140134_119141539_119141660_119141937
ENSMUSG00000030978.11_0	chr7	+	3983	19	FSM	ENSMUSG00000030978.11	ENSMUST00000033283.10	3997	19	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTAATGGTGGCTATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	102090912	102118975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_102091251_102092193_102092283_102095756_102095935_102097007_102097109_102098401_102098462_102099242_102099283_102100107_102100271_102103702_102103845_102105677_102105762_102106358_102106521_102106766_102106847_102108595_102108798_102109497_102109648_102109836_102110059_102110813_102110891_102112852_102112989_102114924_102115021_102116084_102116274_102117501
ENSMUSG00000030979.14_0	chr7	-	1620	10	FSM	ENSMUSG00000030979.14	ENSMUST00000106145.10	1644	10	6	18	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAATAAATAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	133310792	133288102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310652
ENSMUSG00000030979.14_1	chr7	-	1735	10	FSM	ENSMUSG00000030979.14	ENSMUST00000033276.11	1762	10	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	133311000	133288110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133288846_133291310_133291410_133292236_133292323_133292814_133292896_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ENSMUSG00000030979.14_3	chr7	-	978	6	ISM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	6599	7	6498	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCATGTCACTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	133304189	133293869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_133294386_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058
ENSMUSG00000030979.14_4	chr7	-	1037	7	FSM	ENSMUSG00000030979.14	ENSMUST00000106144.8	1045	7	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCATGTCACTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	133310787	133293869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133294386_133299397_133299473_133300872_133300948_133302542_133302640_133303567_133303652_133304058_133304199_133310737
ENSMUSG00000030980.18_0	chr7	-	5369	5	FSM	ENSMUSG00000030980.18	ENSMUST00000116280.9	5382	5	8	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAAATATAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	118455213	118441449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845
ENSMUSG00000030980.18_1	chr7	-	5505	6	NNC	ENSMUSG00000030980.18	novel	5524	6	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAAATATAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	118455461	118441449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_118445318_118447671_118447798_118449843_118449913_118451625_118452564_118454845_118455200_118455311
ENSMUSG00000030980.18_17	chr7	-	4866	5	FSM	ENSMUSG00000030980.18	ENSMUST00000063607.12	4884	5	7	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAAATAAAATCCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	118455217	118441470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118445318_118447671_118447798_118449843_118449913_118452111_118452564_118454845
ENSMUSG00000030980.18_18	chr7	-	447	3	FSM	ENSMUSG00000030980.18	ENST00000568230.5	456	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTAAATATTATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	118449908	118445013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118445318_118447719_118447798_118449843
ENSMUSG00000030980.18_20	chr7	-	1285	4	FSM	ENSMUSG00000030980.18	ENST00000445020.1	1307	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACGGGGCTGGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	118452553	118445098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118445318_118447719_118447798_118449843_118449900_118451621
ENSMUSG00000030982.20_0	chr7	+	5081	31	FSM	ENSMUSG00000030982.20	ENSMUST00000059390.13	5097	31	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCACTTTCACTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	118339458	118442183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_118339999_118342817_118342918_118345597_118345766_118347348_118347472_118348889_118348915_118352039_118352117_118353028_118353158_118359383_118359469_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030982.20_6	chr7	+	2917	24	FSM	ENSMUSG00000030982.20	ENSMUST00000033280.14	2934	24	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGCAGTGTCTCGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	118363362	118440709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_118363920_118365587_118365648_118372243_118372341_118373222_118373271_118374514_118374609_118378910_118378989_118379399_118379523_118389232_118389280_118390590_118390703_118391784_118391902_118393764_118393819_118396188_118396270_118399660_118399724_118400483_118400570_118403326_118403408_118406213_118406278_118409100_118409200_118411027_118411106_118412752_118412868_118425406_118425547_118432924_118433091_118437335_118437455_118439777_118439925_118440418
ENSMUSG00000030983.5_0	chr7	+	1223	7	FSM	ENSMUSG00000030983.5	ENSMUST00000033282.5	1244	7	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCATACTTGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	133311075	133322867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_133311258_133315916_133315992_133316627_133316709_133318589_133318680_133319327_133319516_133320832_133321008_133322435
ENSMUSG00000030986.14_0	chr7	-	2936	12	FSM	ENSMUSG00000030986.14	ENSMUST00000033290.12	2955	12	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTCTTCAATGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	133378517	133322674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133361128_133361643_133378330
ENSMUSG00000030986.14_10	chr7	-	2217	11	FSM	ENSMUSG00000030986.14	ENSMUST00000106139.8	2233	11	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTGACCAAAATAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	133378423	133322785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133323126_133323877_133324060_133324770_133324959_133326128_133326279_133326932_133327125_133335696_133335856_133335937_133336038_133338917_133339164_133344157_133344531_133350571_133350766_133378330
ENSMUSG00000030987.6_0	chr7	+	4061	12	FSM	ENSMUSG00000030987.6	ENSMUST00000033289.6	4085	12	18	6	18	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTCTGCTGGCTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	101917030	102086519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101917761_102003707_102003839_102035293_102035409_102057573_102057686_102060455_102060572_102064544_102064723_102070559_102070738_102075179_102075348_102075906_102076008_102076288_102076525_102080091_102080159_102084590
ENSMUSG00000030990.19_0	chr7	+	2123	7	FSM	ENSMUSG00000030990.19	ENSMUST00000120879.8	2141	7	11	7	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	101859579	101887767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101859799_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_1	chr7	+	2013	7	FSM	ENSMUSG00000030990.19	ENSMUST00000156529.8	2034	7	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	101872248	101887767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101872358_101872585_101872698_101875477_101875653_101885300_101885554_101885654_101885750_101886328_101886438_101886607
ENSMUSG00000030990.19_2	chr7	+	739	5	FSM	ENSMUSG00000030990.19	ENST00000464261.5	749	5	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACACTGTTGTCCTAACC	NA	NA	NA	NA	NA	NA	NA	NA	101875482	101886631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101875653_101885300_101885554_101885654_101885838_101886328_101886438_101886607
ENSMUSG00000030990.19_3	chr7	+	711	4	ISM	ENSMUSG00000030990.19	ENST00000464261.5	749	5	11	197	11	-197	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGCCAGGCTAGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	101875486	101886437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_101875653_101885300_101885554_101885654_101885838_101886328
ENSMUSG00000030990.19_4	chr7	+	1067	5	FSM	ENSMUSG00000030990.19	ENST00000493547.6	1089	5	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCACTAAGGTTAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101875490	101886977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101875653_101885300_101885554_101885654_101885828_101886328_101886438_101886607
ENSMUSG00000030990.19_5	chr7	+	1975	6	FSM	ENSMUSG00000030990.19	ENSMUST00000120119.9	1979	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTCTGAGGTAGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	101879209	101887767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101879396_101880472_101880633_101885300_101885554_101885654_101885762_101886328_101886438_101886607
ENSMUSG00000030994.17_0	chr7	-	2011	6	FSM	ENSMUSG00000030994.17	ENST00000356858.7	2043	6	22	10	22	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAATGCAGTTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	133951537	133868358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133868567_133871922_133871987_133894956_133895135_133896693_133896873_133899844_133900130_133950440
ENSMUSG00000031004.9_1	chr7	-	10049	14	FSM	ENSMUSG00000031004.9	ENSMUST00000033310.9	10061	14	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTGGCCTCTCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	135318078	135291512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_135291863_135294808_135295226_135295960_135302797_135303630_135303787_135305796_135305969_135306067_135306187_135306271_135306525_135307338_135307515_135309089_135310050_135310494_135310541_135312573_135312641_135315485_135315602_135315689_135315769_135317776
ENSMUSG00000031007.3_0	chrX	+	2309	9	FSM	ENSMUSG00000031007.3	ENSMUST00000033313.3	2324	9	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAATTATGGTTACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	12454050	12483284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_16	chrX	+	1005	7	FSM	ENSMUSG00000031007.3	ENST00000423649.2	1007	7	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTGAATTGTGATATA	NA	NA	NA	NA	NA	NA	NA	NA	12454124	12482288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_19	chrX	+	1219	9	FSM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTGAATTGTGATATA	NA	NA	NA	NA	NA	NA	NA	NA	12454124	12482288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12454175_12460999_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475093_12475194_12481920
ENSMUSG00000031007.3_25	chrX	+	1083	7	FSM	ENSMUSG00000031007.3	ENST00000636970.1	1087	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTAATACATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12454124	12482359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12454175_12462394_12462527_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_32	chrX	+	1773	8	FSM	ENSMUSG00000031007.3	ENST00000636251.1	1786	8	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATGACAAATAAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	12454124	12482953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12454175_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_64	chrX	+	1158	8	ISM	ENSMUSG00000031007.3	ENST00000447485.6	1221	9	6886	2	6886	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGTTGAATTGTGATATA	NA	NA	NA	NA	NA	NA	NA	NA	12461010	12482288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_12461131_12462394_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475093_12475194_12481920
ENSMUSG00000031007.3_79	chrX	+	1715	7	ISM	ENSMUSG00000031007.3	ENST00000636251.1	1786	8	8278	13	8278	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATGACAAATAAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	12462402	12482953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_12462527_12471105_12471202_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031007.3_80	chrX	+	1024	6	ISM	ENSMUSG00000031007.3	ENST00000636970.1	1087	7	8279	4	8279	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCATTTAATACATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	12462403	12482359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_12462527_12471356_12471495_12472519_12472574_12473169_12473320_12475073_12475194_12481920
ENSMUSG00000031010.18_0	chrX	+	11870	45	FSM	ENSMUSG00000031010.18	ENSMUST00000089302.11	11887	45	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTAAATTTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	12937759	13039557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12937973_12960162_12960417_12964688_12964835_12966671_12966752_12969566_12969680_12970821_12971041_12973303_12973420_12973902_12974155_12974228_12974368_12976314_12976468_12977330_12977436_12979798_12980006_12980746_12980884_12982862_12982997_12987671_12987760_12989406_12989750_12990806_12990903_12991634_12991847_12994446_12994688_12995215_12995366_12996464_12996586_12997965_12998097_12998308_12998588_13001182_13001309_13002683_13002810_13003846_13004014_13006347_13006457_13006648_13006796_13007945_13008093_13010524_13010748_13011365_13011587_13014183_13014375_13017508_13017683_13020330_13020473_13022232_13022987_13023907_13024032_13024957_13025184_13026012_13026143_13026985_13027172_13027552_13027774_13027861_13027951_13030950_13031108_13031510_13031724_13032870_13032967_13035585
ENSMUSG00000031012.18_0	chrX	-	8240	25	FSM	ENSMUSG00000031012.18	ENSMUST00000115436.9	8260	25	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACATGAAAAGGCACG	NA	NA	NA	NA	NA	NA	NA	NA	13712774	13383332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_1	chrX	-	8338	26	FSM	ENSMUSG00000031012.18	ENSMUST00000115438.10	8366	26	14	14	-8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACATGAAAAGGCACG	NA	NA	NA	NA	NA	NA	NA	NA	13712803	13383332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404081_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_11	chrX	-	4498	27	FSM	ENSMUSG00000031012.18	ENST00000645986.2	4519	27	11	10	-6	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGATAACTAACAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	13712823	13387297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13398104_13398225_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466595_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_18	chrX	-	3986	25	FSM	ENSMUSG00000031012.18	ENST00000378154.3	4002	25	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATAATAATCATGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	13712742	13387580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_27	chrX	-	3216	25	FSM	ENSMUSG00000031012.18	ENST00000646120.2	3225	25	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTTTTTAAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13712315	13387890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031012.18_4	chrX	-	3954	26	FSM	ENSMUSG00000031012.18	ENST00000645566.1	3960	26	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATTAAATGCCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	13712329	13387235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_13388587_13392236_13392321_13399578_13399782_13403824_13403906_13403999_13404066_13410752_13410869_13415403_13415601_13417185_13417222_13418611_13418681_13421116_13421186_13423230_13423317_13425558_13425638_13427753_13427943_13434714_13434796_13437272_13437351_13453082_13453205_13466587_13466696_13474972_13475057_13480708_13480832_13486888_13487065_13492433_13492537_13543823_13543897_13549209_13549288_13580904_13581011_13652175_13652289_13712246
ENSMUSG00000031015.9_0	chr7	+	4014	12	FSM	ENSMUSG00000031015.9	ENSMUST00000033325.9	4027	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTAAACTGGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	109820925	109882708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109821117_109842590_109842732_109854941_109855116_109863086_109863315_109865042_109865190_109866988_109867098_109869106_109869289_109872466_109872575_109873841_109874009_109878386_109878586_109879773_109879871_109880437
ENSMUSG00000031016.10_0	chr7	+	3404	11	FSM	ENSMUSG00000031016.10	ENSMUST00000033326.10	3419	11	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTAATTGTCTAAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	109721260	109742486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109722133_109723662_109723869_109725013_109725075_109725202_109725376_109725907_109726030_109730035_109730183_109733961_109734058_109734844_109734931_109738355_109738527_109738768_109738915_109741162
ENSMUSG00000031021.14_0	chr7	-	1680	5	FSM	ENSMUSG00000031021.14	ENSMUST00000033333.13	1703	5	12	11	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCCAATCAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	109351474	109335051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351277
ENSMUSG00000031021.14_1	chr7	-	1755	5	FSM	ENSMUSG00000031021.14	ENSMUST00000118571.2	1771	5	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCCAATCAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	109352075	109335051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109336199_109342753_109342889_109344516_109344626_109349219_109349312_109351803
ENSMUSG00000031022.16_0	chr7	-	1626	6	FSM	ENSMUSG00000031022.16	ENSMUST00000033334.5	1626	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCCAGTCTCTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109323057	109311390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109311743_109315052_109315695_109317131_109317367_109319737_109319895_109322325_109322511_109323002
ENSMUSG00000031022.16_1	chr7	-	1560	5	ISM	ENSMUSG00000031022.16	ENSMUST00000106735.9	1957	6	486	11	486	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTTTTACTTCCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	109322507	109311398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_109311743_109315052_109315695_109317131_109317367_109319737_109319895_109322325
ENSMUSG00000031023.6_0	chr7	+	999	6	FSM	ENSMUSG00000031023.6	ENSMUST00000033335.6	1028	6	17	12	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAAAGAATTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	109302913	109311384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109302984_109303152_109303378_109304157_109304239_109306604_109306719_109308147_109308229_109310956
ENSMUSG00000031024.14_0	chr7	-	2995	19	FSM	ENSMUSG00000031024.14	ENSMUST00000168005.8	3004	19	4	5	4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCTTATTGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	109216350	109123122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109216264
ENSMUSG00000031024.14_1	chr7	-	4245	20	FSM	ENSMUSG00000031024.14	ENSMUST00000079282.8	4255	20	5	5	5	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTCTTATTGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	109216349	109123122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109216264
ENSMUSG00000031024.14_4	chr7	-	3152	19	FSM	ENSMUSG00000031024.14	ENSMUST00000084738.5	3161	19	3	6	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCTGAAGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	109215757	109123132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109169213_109169319_109215504
ENSMUSG00000031024.14_5	chr7	-	4601	20	FSM	ENSMUSG00000031024.14	ENSMUST00000077909.9	4612	20	5	6	5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCTGAAGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	109215955	109123132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109152181_109152319_109155417_109156669_109169213_109169319_109215504
ENSMUSG00000031024.14_6	chr7	-	2980	17	FSM	ENSMUSG00000031024.14	ENST00000530991.5	2997	17	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTACATTCATTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	109145248	109123145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109123888_109124469_109124557_109124745_109124986_109125432_109125545_109126550_109126593_109126820_109126999_109130288_109130438_109133840_109133982_109134500_109134579_109137482_109137553_109138140_109138251_109138868_109139054_109139598_109139644_109140542_109140640_109141526_109141743_109144283_109144436_109144912
ENSMUSG00000031029.7_0	chr7	+	2498	8	FSM	ENSMUSG00000031029.7	ENSMUST00000033342.7	2514	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTCTGCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	108533634	108542153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_108534015_108536952_108537024_108537242_108537323_108537615_108537754_108539396_108539489_108539850_108539988_108540100_108540215_108540667
ENSMUSG00000031059.10_0	chrX	-	889	3	FSM	ENSMUSG00000031059.10	ENSMUST00000116621.2	908	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAAGTATGACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20483850	20481575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20481782_20481952_20482084_20483298
ENSMUSG00000031060.17_0	chrX	+	3670	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115375.8	3698	24	22	6	22	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCATCTTCCATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20483763	20517121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20484322_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511834_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031060.17_10	chrX	+	3157	23	FSM	ENSMUSG00000031060.17	ENSMUST00000084383.10	3172	23	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTTTCTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	20484030	20517134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031060.17_3	chrX	+	3545	24	FSM	ENSMUSG00000031060.17	ENSMUST00000115374.8	3564	24	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTACTTTCTCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	20483873	20517134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20484291_20486212_20486354_20501969_20502154_20503664_20503896_20505671_20505742_20507421_20507496_20508982_20509070_20510910_20510972_20511103_20511281_20511675_20511837_20512007_20512106_20512197_20512286_20513560_20513745_20513849_20513990_20514104_20514226_20514320_20514413_20514495_20514661_20515382_20515533_20515626_20515693_20515770_20515960_20516039_20516115_20516401_20516509_20516585_20516716_20516797
ENSMUSG00000031065.15_2	chrX	+	3095	16	FSM	ENSMUSG00000031065.15	ENST00000457458.6	3116	16	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTAAAGTTCAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20554220	20566103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20554601_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031065.15_8	chrX	+	3101	16	FSM	ENSMUSG00000031065.15	ENSMUST00000033380.7	3120	16	9	10	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCAAAGTCTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	20554665	20566109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20555046_20559562_20559771_20560276_20560411_20560509_20560636_20560727_20560785_20560870_20560986_20561748_20561844_20561937_20562001_20562256_20562381_20562585_20562707_20562786_20562885_20562969_20563076_20563160_20563204_20563358_20563450_20564689_20564768_20564847
ENSMUSG00000031066.11_0	chrX	+	3220	21	FSM	ENSMUSG00000031066.11	ENST00000218348.7	3237	21	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCCAGATTCCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	20570081	20586507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584048_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031066.11_18	chrX	+	3451	21	FSM	ENSMUSG00000031066.11	ENSMUST00000033383.3	3467	21	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACACCTAGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	20570152	20586770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20570359_20577987_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584044_20584232_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031066.11_27	chrX	+	2937	20	FSM	ENSMUSG00000031066.11	ENST00000377107.7	2953	20	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGATTCCCATGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	20577995	20586509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20578098_20578268_20578400_20578564_20578683_20579075_20579222_20579353_20579416_20579535_20579636_20579986_20580161_20580252_20580412_20580745_20580971_20581091_20581176_20581266_20581362_20582985_20583193_20583993_20584048_20584275_20584512_20584592_20584664_20584917_20585031_20585303_20585454_20585537_20585654_20585831_20585921_20586004
ENSMUSG00000031068.9_0	chr7	+	1669	11	FSM	ENSMUSG00000031068.9	ENSMUST00000064404.8	1685	11	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3708	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTGACTTGTTCCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	137039354	137070319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_137039501_137046707_137046817_137054425_137054501_137055141_137055344_137060851_137061025_137061209_137061272_137063074_137063133_137064689_137064743_137065826_137065867_137066143_137066237_137069661
ENSMUSG00000031070.16_1	chr7	+	2071	3	FSM	ENSMUSG00000031070.16	ENSMUST00000033386.12	2087	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGCTCGATGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	144854573	144863287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_144854730_144857550_144857666_144861487
ENSMUSG00000031070.16_3	chr7	+	1931	4	FSM	ENSMUSG00000031070.16	ENSMUST00000117718.2	1935	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGCACTCAGCATCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	144854635	144863082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_144854730_144857550_144857666_144861097_144861225_144861487
ENSMUSG00000031072.15_0	chr7	+	2208	4	FSM	ENSMUSG00000031072.15	ENSMUST00000128057.8	2231	4	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGGCAGTCTGACATTG	NA	NA	NA	NA	NA	NA	NA	NA	144468851	144484477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144482661
ENSMUSG00000031072.15_1	chr7	+	2005	5	FSM	ENSMUSG00000031072.15	ENSMUST00000033388.12	2015	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTAGTCTGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	144468875	144474865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_144469067_144470164_144470271_144471346_144471418_144472960_144473079_144473346
ENSMUSG00000031075.20_0	chr7	-	4510	26	FSM	ENSMUSG00000031075.20	ENSMUST00000121758.8	4552	26	33	9	33	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACACAACCCTGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	144292247	144142294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144173211_144173224_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
ENSMUSG00000031075.20_2	chr7	-	4503	25	FSM	ENSMUSG00000031075.20	ENSMUST00000033393.15	4585	25	70	12	21	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTGAATACACAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	144292259	144142301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144144003_144146437_144146544_144149178_144149364_144150917_144150971_144157177_144157331_144161654_144161801_144162586_144162688_144164579_144164638_144165071_144165184_144165350_144165553_144168586_144168662_144172585_144172658_144175404_144175488_144187332_144187494_144190811_144190947_144192236_144192302_144198444_144198487_144201760_144201817_144204239_144204292_144207940_144207996_144209335_144209488_144210751_144210851_144223079_144223413_144232370_144232517_144292099
ENSMUSG00000031077.8_0	chr7	-	3890	2	FSM	ENSMUSG00000031077.8	ENSMUST00000033394.8	3903	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAGGTTTCTTGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	144136187	144131054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144134598_144135840
ENSMUSG00000031078.16_0	chr7	-	2906	17	FSM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTTACTGTGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	144024482	143989476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031078.16_1	chr7	-	2841	16	ISM	ENSMUSG00000031078.16	ENSMUST00000033407.13	2913	17	4706	7	4706	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTTACTGTGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	144019776	143989476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690
ENSMUSG00000031078.16_3	chr7	-	3271	18	FSM	ENSMUSG00000031078.16	ENSMUST00000103079.4	3286	18	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATTTACTGTGTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	144024736	143989476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143990839_143991685_143991758_143992502_143992669_143993745_143993836_143995435_143995585_143999539_143999610_144003296_144003353_144004714_144004826_144005763_144005875_144006284_144006396_144008412_144008524_144010177_144010233_144011405_144011517_144014915_144015046_144017039_144017114_144017648_144017736_144019690_144019785_144024425
ENSMUSG00000031079.13_0	chrX	-	4627	5	FSM	ENSMUSG00000031079.13	ENSMUST00000040667.13	4634	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTATTATAAATAAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	20955461	20945412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20949531_20950146_20950240_20950454_20950595_20954760_20954820_20955244
ENSMUSG00000031090.15_0	chr7	-	2619	21	FSM	ENSMUSG00000031090.15	ENSMUST00000033415.15	2641	21	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTCTAAACACAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	143376573	143349337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143349794_143351561_143351739_143352191_143352321_143352777_143352848_143353527_143353660_143356932_143357040_143357750_143357887_143359651_143359821_143360616_143360720_143361123_143361173_143361721_143361847_143362528_143362604_143364905_143365038_143366226_143366345_143366499_143366589_143367126_143367179_143369322_143369413_143369910_143369965_143372829_143372947_143374908_143374970_143376395
ENSMUSG00000031093.15_0	chrX	+	6634	53	FSM	ENSMUSG00000031093.15	ENSMUST00000033419.13	6665	53	25	6	25	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAATTCGAAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	35152509	35340209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_35152686_35208063_35208181_35208264_35208355_35209368_35209452_35210537_35210608_35210959_35211056_35224254_35224390_35226891_35227070_35227434_35227515_35228698_35228783_35232342_35232484_35233689_35233903_35239699_35239823_35241139_35241223_35243959_35244083_35244267_35244345_35246087_35246273_35246359_35246426_35248452_35248546_35251145_35251270_35256685_35256808_35257250_35257338_35258076_35258167_35263740_35263860_35266162_35266233_35266318_35266445_35267653_35267726_35270252_35270400_35271726_35271811_35272991_35273104_35275284_35275464_35277562_35277680_35279866_35279943_35280450_35280561_35283644_35283757_35291952_35292020_35293633_35293682_35295933_35296077_35297955_35298072_35301191_35301330_35304764_35304948_35308518_35308633_35310706_35310923_35311010_35311069_35316133_35316241_35323200_35323324_35324846_35324961_35325933_35326081_35330522_35330734_35331312_35331504_35331982_35332084_35333500_35333640_35339751
ENSMUSG00000031095.16_0	chrX	-	3285	22	ISM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	3719	0	3706	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	37661354	37622150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280
ENSMUSG00000031095.16_1	chrX	-	3346	20	FSM	ENSMUSG00000031095.16	ENSMUST00000016681.15	3354	20	8	0	8	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	37653394	37622150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539
ENSMUSG00000031095.16_13	chrX	-	3075	23	FSM	ENSMUSG00000031095.16	ENSMUST00000050083.6	3090	23	13	2	13	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGTTATTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	37665047	37622452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37664956
ENSMUSG00000031095.16_2	chrX	-	3341	23	FSM	ENSMUSG00000031095.16	ENSMUST00000115118.8	3344	23	3	0	3	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCATTTAAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	37665070	37622150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37622606_37625998_37626152_37627830_37628004_37628876_37628983_37629813_37629928_37630927_37631036_37632208_37632295_37633625_37633737_37634372_37634478_37635568_37635762_37636723_37636843_37637305_37637374_37638085_37638169_37638464_37638555_37638713_37638877_37639742_37639817_37640530_37640601_37641258_37641363_37650485_37650602_37652539_37653086_37653809_37653984_37661280_37661356_37665015
ENSMUSG00000031097.16_0	chr7	+	724	7	NIC	ENSMUSG00000031097.16	novel	732	8	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGTCTAGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	141995544	141998146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_141995606_141996205_141996236_141996907_141996950_141997039_141997169_141997307_141997398_141997642_141997820_141997951
ENSMUSG00000031097.16_3	chr7	+	746	6	NIC	ENSMUSG00000031097.16	novel	768	7	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGGCCTCGCTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	141996081	141998105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_141996236_141996907_141996950_141997039_141997169_141997307_141997398_141997642_141997820_141997951
ENSMUSG00000031097.16_6	chr7	+	635	5	ISM	ENSMUSG00000031097.16	ENSMUST00000149529.8	768	7	839	-41	839	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTGTGGTCTAGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	141996905	141998146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_141996950_141997039_141997169_141997307_141997398_141997642_141997820_141997951
ENSMUSG00000031099.17_0	chrX	-	4100	25	FSM	ENSMUSG00000031099.17	ENST00000371122.8	4119	25	10	9	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAAATATAATTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	46981395	46898257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_46899067_46900003_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46944454_46944491_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ENSMUSG00000031099.17_1	chrX	-	3945	24	FSM	ENSMUSG00000031099.17	ENST00000371123.5	3959	24	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGAAATATAATTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	46981376	46898257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_46898998_46900034_46900146_46912241_46912455_46912566_46912686_46915369_46915503_46917735_46917859_46930413_46930528_46930785_46930897_46938792_46938913_46940521_46940671_46941471_46941605_46943442_46943596_46947132_46947255_46949297_46949525_46950155_46950266_46963031_46963101_46964040_46964173_46965261_46965418_46968322_46968503_46972224_46972326_46972452_46972554_46972913_46973081_46975988_46976076_46981102
ENSMUSG00000031103.13_0	chrX	-	6068	9	FSM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	10	10	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGGTGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	47543036	47499932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47542748
ENSMUSG00000031103.13_2	chrX	-	5836	9	FSM	ENSMUSG00000031103.13	ENSMUST00000033429.9	5847	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAAGGCTGAAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47552009	47499936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954_47513232_47551949
ENSMUSG00000031103.13_3	chrX	-	5779	8	ISM	ENSMUSG00000031103.13	ENSMUST00000114958.8	6088	9	29816	10	29816	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGGTGTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	47513230	47499932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_47504324_47505523_47505902_47506747_47506941_47507031_47507116_47507884_47508077_47509152_47509246_47509580_47509753_47512954
ENSMUSG00000031104.3_0	chrX	+	1153	2	FSM	ENSMUSG00000031104.3	ENSMUST00000033430.3	1158	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTATCACGTGGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47608161	47619104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47608736_47618525
ENSMUSG00000031105.17_0	chrX	+	1758	11	FSM	ENSMUSG00000031105.17	ENSMUST00000033431.14	1760	11	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47712454	47751169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47712706_47712838_47713075_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_1	chrX	+	1794	12	FSM	ENSMUSG00000031105.17	ENSMUST00000134257.8	1805	12	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47712463	47751169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47712706_47712838_47713075_47714472_47714518_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_2	chrX	+	1353	10	FSM	ENSMUSG00000031105.17	ENST00000543953.5	1362	10	4	5	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47712623	47751169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47712706_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_5	chrX	+	1578	11	FSM	ENSMUSG00000031105.17	ENSMUST00000114936.8	1582	11	0	4	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCATTTTGACTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	47712641	47751167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47712706_47712838_47713084_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_8	chrX	+	1506	10	FSM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47712848	47751169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47713084_47718128_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031105.17_9	chrX	+	1273	9	ISM	ENSMUSG00000031105.17	ENSMUST00000177710.2	1516	10	5288	0	5288	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATTTTGACTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	47718126	47751169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_47718223_47719765_47719914_47723633_47723729_47726266_47726353_47729111_47729208_47740806_47740932_47742243_47742380_47749565_47749647_47750759
ENSMUSG00000031107.7_0	chrX	+	1728	6	FSM	ENSMUSG00000031107.7	ENSMUST00000033433.3	1747	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTCGGGGCATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47783891	47799592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47783998_47784196_47784313_47786277_47786330_47795181_47795312_47797766_47797951_47798452
ENSMUSG00000031109.17_3	chrX	-	3539	12	FSM	ENSMUSG00000031109.17	ENST00000370935.5	3555	12	4	12	4	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTAAATAAATTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	48169622	48098618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_48100512_48102373_48102460_48107659_48107769_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493
ENSMUSG00000031109.17_5	chrX	-	3821	15	FSM	ENSMUSG00000031109.17	ENST00000394363.6	3839	15	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTTAAATAAATTTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	48377060	48098618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_48100512_48102373_48102460_48107659_48107769_48111970_48112079_48114039_48114222_48129392_48129508_48140608_48140716_48142585_48142799_48145211_48145446_48151019_48151227_48158511_48158668_48169493_48169629_48257517_48257662_48375732_48375782_48376977
ENSMUSG00000031111.17_0	chrX	-	4369	19	FSM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAACTGCAAACCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	48886592	48871430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48884155_48884285_48886529
ENSMUSG00000031111.17_1	chrX	-	4427	19	FSM	ENSMUSG00000031111.17	ENST00000361420.8	4441	19	5	9	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGCAAACCAAACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	48886617	48871426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883648_48884123_48884285_48886529
ENSMUSG00000031111.17_3	chrX	-	4303	18	ISM	ENSMUSG00000031111.17	ENST00000370904.6	4379	19	2313	8	-40	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAACTGCAAACCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	48884281	48871430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873382_48873671_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883651_48884155
ENSMUSG00000031111.17_53	chrX	-	4129	19	FSM	ENSMUSG00000031111.17	ENST00000652189.1	4129	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGAGAATATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	48886759	48871450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883648_48884123_48884285_48886529_48886592_48886719
ENSMUSG00000031111.17_54	chrX	-	4084	18	ISM	ENSMUSG00000031111.17	ENST00000652189.1	4129	19	173	0	8	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAAGAGAATATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	48886586	48871450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_48871830_48871976_48872101_48872488_48872768_48872898_48873187_48873848_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876943_48877024_48877096_48878958_48879080_48879391_48879671_48880163_48880458_48880691_48880977_48882780_48883069_48883368_48883648_48884123_48884285_48886529
ENSMUSG00000031112.11_0	chrX	+	1767	12	FSM	ENSMUSG00000031112.11	ENST00000481105.5	1776	12	9	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTAATTTTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	49930326	49980470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_49930424_49930555_49930713_49959132_49959364_49968330_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_21	chrX	+	1192	10	FSM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTGAAGATTTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	49930662	49980320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_49930713_49959132_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_27	chrX	+	1137	9	ISM	ENSMUSG00000031112.11	ENST00000496850.1	1192	10	28475	0	28475	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTGAAGATTTAGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	49959137	49980320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_49959364_49968365_49968423_49974465_49974575_49974663_49974822_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031112.11_3	chrX	+	2995	11	FSM	ENSMUSG00000031112.11	ENST00000394335.6	3010	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTTATGATCCTCGATG	NA	NA	NA	NA	NA	NA	NA	NA	49930329	49981967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_49930424_49930555_49930713_49968365_49968423_49974465_49974575_49974663_49974822_49975527_49975714_49976737_49976887_49977892_49977987_49978565_49978629_49978709_49978847_49980176
ENSMUSG00000031125.3_0	chrX	+	1009	8	FSM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATGAATAAGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	55181931	55198845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55181986_55183330_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ENSMUSG00000031125.3_4	chrX	+	951	7	ISM	ENSMUSG00000031125.3	ENSMUST00000033458.3	1022	8	1406	10	1406	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATAAGTGAGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55183337	55198848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_55183457_55183770_55183835_55184104_55184140_55192435_55192554_55193247_55193348_55198014_55198114_55198432
ENSMUSG00000031129.10_0	chr9	+	3451	16	FSM	ENSMUSG00000031129.10	ENSMUST00000033463.10	3468	16	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGTATGATTGCATTGG	NA	NA	NA	NA	NA	NA	NA	NA	94551970	95112490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_94552290_94567107_94567311_94593396_94593475_94594947_94595025_94691979_94692096_94737743_94737850_94818362_94818502_94821508_94821615_94842450_94842540_94901157_94901272_94902653_94902766_94937464_94937619_95005063_95005116_95019953_95020034_95109240_95109347_95110890
ENSMUSG00000031132.2_0	chrX	+	1683	4	FSM	ENSMUSG00000031132.2	ENST00000370628.2	1698	4	8	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTATTGTTGTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	56257500	56269896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_56257671_56259324_56259457_56263083_56263139_56268570
ENSMUSG00000031134.17_0	chrX	-	3080	8	FSM	ENSMUSG00000031134.17	ENSMUST00000098470.9	3107	8	21	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGATTTAAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	56438375	56431395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437062_56438211
ENSMUSG00000031134.17_11	chrX	-	897	6	FSM	ENSMUSG00000031134.17	ENST00000456392.1	910	6	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATACTAGGAACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	56437031	56432451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_56432741_56434148_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926
ENSMUSG00000031134.17_2	chrX	-	2006	9	FSM	ENSMUSG00000031134.17	ENSMUST00000114730.8	2019	9	5	8	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAACCCTGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	56438317	56431725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437043_56438211
ENSMUSG00000031134.17_3	chrX	-	2093	9	FSM	ENSMUSG00000031134.17	ENSMUST00000114726.8	2108	9	11	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAACCCTGAAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	56438385	56431725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_56432754_56433420_56433504_56433881_56434008_56434104_56434220_56434778_56434932_56435423_56435596_56436631_56436739_56436926_56437062_56438211
ENSMUSG00000031137.18_0	chrX	-	854	5	FSM	ENSMUSG00000031137.18	ENST00000436198.5	867	5	12	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTGTTATCACCCATA	NA	NA	NA	NA	NA	NA	NA	NA	58296315	58108746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_58109030_58112760_58112960_58171253_58171358_58177199_58177311_58296158
ENSMUSG00000031138.5_0	chrX	+	1286	7	FSM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTAACTTAATGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	59044828	59074790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_59044912_59049196_59049361_59049767_59049793_59061521_59061651_59064297_59064531_59073794_59073910_59074253
ENSMUSG00000031138.5_12	chrX	+	1206	6	ISM	ENSMUSG00000031138.5	ENST00000394090.2	1302	7	4371	10	4371	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACTTAATGAAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	59049194	59074791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_59049361_59049767_59049793_59061521_59061651_59064297_59064531_59073794_59073910_59074253
ENSMUSG00000031143.5_0	chrX	-	2342	17	FSM	ENSMUSG00000031143.5	ENSMUST00000033483.5	2353	17	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACGCTTAGGCATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	7471745	7460047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7460407_7460768_7460844_7460922_7460983_7461198_7461295_7461534_7461643_7461724_7461827_7461943_7462061_7462141_7462262_7462732_7462853_7462969_7463033_7463776_7463972_7465396_7465576_7465672_7465740_7465867_7465975_7466859_7466993_7470398_7470577_7471482
ENSMUSG00000031145.16_0	chrX	+	2284	9	FSM	ENSMUSG00000031145.16	ENSMUST00000033485.14	2301	9	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAACATTATTTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	7523504	7534186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7523740_7524859_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUSG00000031145.16_1	chrX	+	2358	8	FSM	ENSMUSG00000031145.16	ENSMUST00000129662.3	2376	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTACAGGGATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	7524783	7534419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7524946_7525774_7525959_7529703_7529818_7530091_7530230_7531168_7531373_7531465_7531653_7532510_7532811_7533350
ENSMUSG00000031146.7_0	chrX	-	1138	5	FSM	ENSMUSG00000031146.7	ENSMUST00000033486.6	1157	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2947	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTATAATGAATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	7537620	7534189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7534746_7535165_7535257_7535653_7535750_7535841_7535998_7537381
ENSMUSG00000031147.9_0	chrX	-	2032	5	FSM	ENSMUSG00000031147.9	ENST00000616266.4	2048	5	16	0	16	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCCCATAAGGAGGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7546234	7540059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7541446_7542071_7542249_7542338_7542608_7543337_7543442_7546138
ENSMUSG00000031148.15_0	chrX	+	3550	11	FSM	ENSMUSG00000031148.15	ENSMUST00000049896.13	3579	11	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAGAAAATAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	7563379	7576482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7563635_7564731_7564893_7564994_7565120_7568301_7568412_7569608_7569823_7571538_7571672_7572249_7572389_7572566_7572691_7572930_7573001_7574174_7574261_7574349
ENSMUSG00000031149.8_0	chrX	+	1320	3	FSM	ENSMUSG00000031149.8	ENSMUST00000033489.8	1339	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTAGTTTGGCCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	7594690	7597297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7595002_7595954_7596173_7596506
ENSMUSG00000031150.14_0	chrX	-	3633	10	FSM	ENSMUSG00000031150.14	ENSMUST00000033490.13	3658	10	15	10	15	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTGAACTTGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	7607565	7597962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604608_7604763_7607450
ENSMUSG00000031150.14_1	chrX	-	2119	9	FSM	ENSMUSG00000031150.14	ENST00000496529.6	2131	9	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGGACCACAAGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	7604749	7599356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7600338_7601310_7601410_7601539_7601715_7602012_7602076_7602930_7603217_7603537_7603679_7604132_7604267_7604400_7604492_7604600
ENSMUSG00000031153.17_0	chrX	+	3141	25	FSM	ENSMUSG00000031153.17	ENSMUST00000065932.14	3156	25	9	6	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTGTCTGGTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	7656012	7686800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031153.17_10	chrX	+	3009	26	FSM	ENSMUSG00000031153.17	ENSMUST00000115675.9	3015	26	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGACTGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7656233	7686796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7660498_7660526_7661230_7661339_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031153.17_13	chrX	+	2861	24	FSM	ENSMUSG00000031153.17	ENSMUST00000101694.10	2867	24	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGACTGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7656246	7686796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7656308_7658308_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031153.17_19	chrX	+	2794	23	ISM	ENSMUSG00000031153.17	ENSMUST00000101694.10	2867	24	2068	6	2068	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCACTGACTGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7658314	7686796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_7658376_7658514_7658577_7665528_7665668_7666395_7666581_7666774_7666823_7667415_7667448_7667542_7667591_7667728_7667829_7669561_7669640_7669832_7669926_7670598_7670734_7676131_7676228_7676491_7676705_7676846_7676961_7678520_7678599_7678703_7678800_7678920_7678978_7679070_7679171_7680806_7680938_7684265_7684389_7684534_7684629_7685405_7685561_7686240
ENSMUSG00000031154.16_0	chrX	+	4250	9	FSM	ENSMUSG00000031154.16	ENSMUST00000033494.16	4259	9	4	5	4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTATCTTGTTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	7708073	7742860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ENSMUSG00000031154.16_2	chrX	+	2539	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115668.10	2543	10	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAACTCTATTCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	7708323	7741528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738439_7739792_7739995_7740078_7740193_7740471
ENSMUSG00000031154.16_4	chrX	+	3788	10	FSM	ENSMUSG00000031154.16	ENSMUST00000115665.2	3821	10	28	5	28	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTACTTATCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	7708382	7742854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7708708_7708836_7708950_7722542_7722637_7733753_7733819_7733905_7734063_7734161_7734311_7738234_7738421_7739792_7739995_7740078_7740193_7740471
ENSMUSG00000031155.18_0	chrX	+	2016	6	FSM	ENSMUSG00000031155.18	ENSMUST00000033495.15	2045	6	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACAAGTGGATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	7744560	7749662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7744796_7744922_7745033_7745866_7745918_7747486_7747860_7748311_7748489_7748592
ENSMUSG00000031156.19_10	chrX	+	830	5	FSM	ENSMUSG00000031156.19	ENST00000376529.8	837	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTTGTGAAGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	7750578	7760692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758968_7759107_7760429
ENSMUSG00000031156.19_2	chrX	+	1519	5	FSM	ENSMUSG00000031156.19	ENSMUST00000115663.10	1527	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGGTTGGAAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	7750488	7760701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7750673_7751987_7752171_7755850_7756003_7758378_7759107_7760429
ENSMUSG00000031156.19_6	chrX	+	483	3	FSM	ENSMUSG00000031156.19	ENST00000635015.1	500	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCCAGGGATCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	7750582	7756022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7750711_7751987_7752171_7755850
ENSMUSG00000031156.19_7	chrX	+	1527	4	FSM	ENSMUSG00000031156.19	ENST00000452555.7	1535	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTATTCCAGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	7750579	7759382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7750673_7751892_7752171_7755850_7756003_7758378
ENSMUSG00000031156.19_8	chrX	+	1490	4	FSM	ENSMUSG00000031156.19	ENST00000616181.5	1498	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCCATGACCCTGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	7750579	7759402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7750711_7751987_7752171_7755850_7756003_7758378
ENSMUSG00000031157.11_0	chrX	-	1087	7	FSM	ENSMUSG00000031157.11	ENSMUST00000033497.9	1104	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATCCATGAGGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	7765498	7760764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765407
ENSMUSG00000031157.11_4	chrX	-	1138	7	FSM	ENSMUSG00000031157.11	ENSMUST00000115655.8	1148	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTGTTGTTTGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7765208	7760821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765009
ENSMUSG00000031157.11_6	chrX	-	1202	7	FSM	ENSMUSG00000031157.11	ENST00000651767.1	1219	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTGACTGACCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7765726	7760957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7761107_7761403_7761468_7761842_7762122_7762231_7762345_7762539_7762652_7764789_7764876_7765327
ENSMUSG00000031158.12_0	chrX	+	2371	6	FSM	ENSMUSG00000031158.12	ENSMUST00000033498.10	2381	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTGCTTGCTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	7765604	7774589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7765709_7767199_7767300_7769911_7769976_7772309_7772439_7772519_7772631_7772726
ENSMUSG00000031161.16_0	chrX	-	4048	29	FSM	ENSMUSG00000031161.16	ENSMUST00000115642.8	4069	29	9	12	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACCTGAAGAAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	7814119	7796370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806156_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141_7813271_7813363_7813484_7813888
ENSMUSG00000031161.16_12	chrX	-	3644	27	FSM	ENSMUSG00000031161.16	ENST00000334136.11	3664	27	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTAATAAAGTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	7813237	7796394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7796777_7797022_7797152_7797247_7797395_7797518_7797621_7797704_7798199_7798301_7798477_7800410_7800561_7802308_7802502_7802620_7802690_7803180_7803315_7803542_7803712_7803865_7803995_7804081_7804251_7804464_7804533_7804624_7804732_7805681_7805772_7805844_7805905_7805998_7806065_7806152_7806284_7808082_7808152_7808271_7808377_7809625_7809724_7809879_7809977_7810812_7810854_7810952_7811038_7812901_7812991_7813141
ENSMUSG00000031162.15_0	chrX	-	1012	5	FSM	ENSMUSG00000031162.15	ENST00000376665.4	1036	5	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAACCACCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	7829473	7825566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7825697_7826821_7826948_7828162_7828309_7828409_7828788_7829241
ENSMUSG00000031166.14_1	chrX	-	4167	9	FSM	ENSMUSG00000031166.14	ENSMUST00000033506.13	4183	9	13	3	13	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGGGCCTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	7999034	7989542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7997865_7998525
ENSMUSG00000031166.14_3	chrX	-	4345	9	FSM	ENSMUSG00000031166.14	ENSMUST00000130832.8	4374	9	15	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAGAAAGAATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7998994	7989576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7991969_7992319_7992439_7994049_7994192_7994272_7994454_7995207_7995516_7996241_7996373_7996494_7996605_7997623_7998117_7998525
ENSMUSG00000031167.17_0	chrX	-	1316	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115621.9	1338	7	10	12	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAAATCAATACTGATA	NA	NA	NA	NA	NA	NA	NA	NA	8012109	8008609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8009195_8009489_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_11	chrX	-	1079	6	ISM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	628	10	611	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGAACACAAATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	8011307	8008616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193
ENSMUSG00000031167.17_2	chrX	-	1168	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115615.9	1183	7	5	10	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAAATCAATACTGATA	NA	NA	NA	NA	NA	NA	NA	NA	8011957	8008609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8009195_8009485_8009569_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_3	chrX	-	1207	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115616.8	1225	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGAACACAAATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	8012004	8008616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8009195_8009489_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031167.17_7	chrX	-	1142	7	FSM	ENSMUSG00000031167.17	ENSMUST00000115617.10	1152	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGAACACAAATCAAT	NA	NA	NA	NA	NA	NA	NA	NA	8011935	8008616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8009195_8009485_8009572_8009896_8009991_8010086_8010187_8010811_8010919_8011193_8011312_8011876
ENSMUSG00000031168.15_0	chrX	-	1723	5	FSM	ENSMUSG00000031168.15	ENSMUST00000033509.15	1743	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATAACACTGAGAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	8059740	8051576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8052073_8052882_8053014_8053121_8053159_8056317_8056676_8059039
ENSMUSG00000031169.14_0	chrX	-	1864	14	FSM	ENSMUSG00000031169.14	ENSMUST00000082320.12	1883	14	11	8	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACAGGCTCGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8072753	8060094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069264_8069283_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUSG00000031169.14_1	chrX	-	1846	15	FSM	ENSMUSG00000031169.14	ENSMUST00000077595.12	1872	15	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACACAACAGGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	8072725	8060099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8067896_8067912_8069264_8069283_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUSG00000031169.14_2	chrX	-	1811	13	FSM	ENSMUSG00000031169.14	ENSMUST00000089402.10	1839	13	17	11	17	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACACAACAGGCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	8072723	8060099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUSG00000031169.14_3	chrX	-	1827	14	FSM	ENSMUSG00000031169.14	ENSMUST00000089403.10	1854	14	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAACAGGCTCGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8072719	8060094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8060517_8064213_8064325_8065305_8065392_8065469_8065534_8065624_8065702_8067414_8067516_8067682_8067809_8067896_8067912_8069397_8069529_8069607_8069790_8070030_8070075_8070434_8070628_8071803_8071973_8072613
ENSMUSG00000031171.12_1	chrX	-	3407	13	FSM	ENSMUSG00000031171.12	ENSMUST00000033513.10	3425	13	12	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAGCACAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	8118633	8104912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_11	chrX	-	564	6	ISM	ENSMUSG00000031171.12	ENST00000396894.8	655	7	2280	9	2280	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATTAAGGTAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	8113018	8111309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965
ENSMUSG00000031171.12_6	chrX	-	1632	13	FSM	ENSMUSG00000031171.12	ENSMUST00000115595.8	1656	13	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCCTACATATGCACG	NA	NA	NA	NA	NA	NA	NA	NA	8118620	8106668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8107070_8111298_8111341_8111522_8111712_8111790_8111889_8112574_8112659_8112770_8112874_8112965_8113020_8113107_8113161_8115217_8115297_8116634_8116726_8116807_8116878_8117118_8117277_8118410
ENSMUSG00000031171.12_8	chrX	-	640	7	FSM	ENSMUSG00000031171.12	ENST00000396894.8	655	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACATTAAGGTAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	8115292	8111309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8111341_8111522_8111712_8111790_8111895_8112574_8112659_8112770_8112874_8112965_8113020_8115217
ENSMUSG00000031174.18_0	chrX	-	2788	17	FSM	ENSMUSG00000031174.18	ENSMUST00000115534.8	2795	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATATGTGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10082692	10024461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082454
ENSMUSG00000031174.18_1	chrX	-	2899	17	FSM	ENSMUSG00000031174.18	ENSMUST00000073392.11	2926	17	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATATGTGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	10083139	10024461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_10025120_10028840_10028930_10030960_10031019_10032314_10032516_10044509_10044576_10048193_10048292_10061056_10061223_10062210_10062394_10065149_10065275_10068248_10068405_10072361_10072521_10074911_10075062_10076837_10076997_10078036_10078100_10078963_10079057_10079767_10079894_10082790
ENSMUSG00000031176.9_0	chrX	-	2162	5	FSM	ENSMUSG00000031176.9	ENSMUST00000033519.3	2176	5	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGGCTCTGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	9529230	9520507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_9522303_9522618_9522697_9523279_9523404_9527218_9527261_9529107
ENSMUSG00000031176.9_2	chrX	-	230	3	FSM	ENSMUSG00000031176.9	ENST00000442517.2	234	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGAGGGGCCTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	9527262	9522621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_9522697_9523279_9523391_9527218
ENSMUSG00000031176.9_3	chrX	-	179	2	ISM	ENSMUSG00000031176.9	ENST00000442517.2	234	3	3879	4	3879	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGAGGGGCCTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	9523383	9522621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_9522697_9523279
ENSMUSG00000031179.15_0	chrX	+	1637	4	FSM	ENSMUSG00000031179.15	ENSMUST00000033522.15	1649	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTTTAGTCTCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	63217164	63222383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_63217298_63219533_63219620_63220397_63220469_63221036
ENSMUSG00000031189.13_0	chrX	+	1435	8	FSM	ENSMUSG00000031189.13	ENST00000370458.5	1450	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGATGATTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	68404341	68828804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_68404445_68567041_68567163_68588014_68588876_68737549_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ENSMUSG00000031189.13_10	chrX	+	7428	17	FSM	ENSMUSG00000031189.13	ENST00000286437.7	7430	17	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCTTCCACTGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68737547	68916067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_68737595_68768647_68768685_68769018_68769071_68810787_68810885_68828667_68828706_68874349_68874510_68877667_68878658_68884081_68884204_68887526_68887747_68892501_68892804_68893375_68893440_68896683_68896821_68900295_68900368_68900735_68900830_68903081_68903135_68907525_68907717_68911315
ENSMUSG00000031189.13_8	chrX	+	1333	7	ISM	ENSMUSG00000031189.13	ENST00000370458.5	1450	8	162706	8	162706	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATGATGATTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	68567040	68828804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_68567163_68588014_68588876_68737549_68737595_68768647_68768685_68769018_68769053_68810787_68810885_68828667
ENSMUSG00000031197.12_1	chrX	+	1580	6	FSM	ENSMUSG00000031197.12	ENSMUST00000033540.6	1595	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1753	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGTTGCCTGACAATTT	NA	NA	NA	NA	NA	NA	NA	NA	74557912	74578541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_74558035_74560694_74560820_74564968_74565036_74566865_74566965_74574690_74574830_74577513
ENSMUSG00000031198.5_0	chrX	+	2554	5	FSM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCAAGTTGGTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	74426004	74440057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_74426058_74430707_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUSG00000031198.5_3	chrX	+	2495	4	ISM	ENSMUSG00000031198.5	ENSMUST00000033541.5	2562	5	4709	8	4709	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTCAAGTTGGTCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	74430713	74440057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_74430859_74434389_74434466_74435245_74435378_74437915
ENSMUSG00000031200.17_0	chrX	-	1582	5	FSM	ENSMUSG00000031200.17	ENSMUST00000033542.11	1592	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACAACATTTTACATAT	NA	NA	NA	NA	NA	NA	NA	NA	74460139	74454049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74454738_74454823_74454876_74454957_74455129_74455240_74455393_74459620
ENSMUSG00000031201.18_0	chrX	+	4287	11	FSM	ENSMUSG00000031201.18	ENSMUST00000033544.14	4310	11	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAACAGCAGTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	74460244	74497595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466505_74479070_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUSG00000031201.18_1	chrX	+	4290	11	NNC	ENSMUSG00000031201.18	novel	4310	11	NA	NA	7	-12	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAACAGCAGTAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	74460240	74497595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chrX_+_74460448_74461182_74461200_74462016_74462072_74466384_74466506_74479072_74479159_74479711_74479801_74481541_74481598_74490761_74490894_74491408_74491453_74493574_74493752_74494289
ENSMUSG00000031202.6_0	chrX	-	3386	2	FSM	ENSMUSG00000031202.6	ENSMUST00000033545.6	3401	2	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCCATATGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74621830	74615659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74618614_74621398
ENSMUSG00000031207.17_0	chrX	+	3065	14	FSM	ENSMUSG00000031207.17	ENST00000360270.7	3086	14	12	9	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTCACTATGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	95139659	95212150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075_95210572_95211328
ENSMUSG00000031207.17_6	chrX	+	3824	13	FSM	ENSMUSG00000031207.17	ENSMUST00000117399.2	3842	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTCACTATGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	95139657	95212150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_95139850_95185470_95185555_95194225_95194322_95196129_95196405_95197900_95197985_95199069_95199217_95201452_95201550_95203693_95203858_95206972_95207104_95207355_95207517_95208980_95209074_95209530_95209756_95210075
ENSMUSG00000031214.14_0	chrX	-	7146	25	FSM	ENSMUSG00000031214.14	ENSMUST00000033560.9	7170	25	14	10	14	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACACTTGCCTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97934577	97597892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97621989_97622314_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687_97933861_97933986
ENSMUSG00000031214.14_5	chrX	-	2862	23	FSM	ENSMUSG00000031214.14	ENST00000679748.1	2876	23	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	97933836	97601237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_97602012_97603191_97603234_97607235_97607287_97608321_97608488_97640633_97640782_97670519_97670680_97684513_97684620_97685356_97685416_97688515_97688601_97739604_97739680_97741892_97741956_97742461_97742496_97745470_97745550_97748635_97748728_97753683_97753785_97755946_97756077_97757712_97757818_97769610_97769722_97775970_97776073_97807310_97807383_97824561_97824624_97846690_97846787_97933687
ENSMUSG00000031217.9_0	chrX	+	3235	5	FSM	ENSMUSG00000031217.9	ENSMUST00000052839.7	3258	5	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAATGAGAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	98179741	98192580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_98180620_98188897_98189176_98190083_98190177_98190357_98190484_98190720
ENSMUSG00000031221.8_0	chrX	+	1504	6	FSM	ENSMUSG00000031221.8	ENSMUST00000033570.6	1518	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGCCTGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	99537905	99559726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99538163_99538510_99538805_99546600_99546797_99548795_99548876_99549545_99549659_99559162
ENSMUSG00000031226.14_0	chrX	+	2624	6	FSM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	5	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGGAAAAAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	104123366	104128783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUSG00000031226.14_2	chrX	+	1231	6	FSM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTACTAAGGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	104123367	104160689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_104123450_104123559_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104159919
ENSMUSG00000031226.14_4	chrX	+	2542	5	ISM	ENSMUSG00000031226.14	ENSMUST00000033577.11	2638	6	197	9	192	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAGGAAAAAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	104123558	104128783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104126621
ENSMUSG00000031226.14_5	chrX	+	1150	5	ISM	ENSMUSG00000031226.14	ENSMUST00000119477.2	1239	6	192	7	192	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTACTAAGGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	104123558	104160689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_104123626_104124976_104125037_104125543_104125685_104126299_104126412_104159919
ENSMUSG00000031227.9_0	chrX	+	3534	1	FSM	ENSMUSG00000031227.9	ENSMUST00000033578.7	3550	1	8	8	8	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCACTAATTTATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	104163991	104167525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_104164000_104167500
ENSMUSG00000031229.17_0	chrX	-	5291	18	FSM	ENSMUSG00000031229.17	ENST00000675732.1	5310	18	11	8	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTTGTGCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	104889606	104841224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874791_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400
ENSMUSG00000031229.17_5	chrX	-	10252	35	FSM	ENSMUSG00000031229.17	ENSMUST00000113573.8	10275	35	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACCAAAATGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	104972998	104841232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104844063_104844953_104845083_104845586_104845683_104846295_104846422_104847389_104847540_104861637_104861833_104862948_104863127_104864381_104864491_104867314_104867422_104869706_104869861_104874453_104874627_104874800_104874881_104876052_104876184_104879915_104880034_104881844_104882021_104883446_104883585_104889102_104889281_104889400_104889548_104890291_104890402_104891187_104891330_104894642_104894877_104895570_104895674_104896889_104896984_104899463_104899638_104900063_104900225_104911456_104911530_104918165_104921180_104921972_104922041_104923514_104923625_104927912_104928027_104931320_104931446_104932598_104932652_104934522_104934579_104943486_104943600_104972705
ENSMUSG00000031231.5_0	chrX	+	989	3	FSM	ENSMUSG00000031231.5	ENSMUST00000033582.5	1001	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGGGTTTAAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	105059315	105066054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_105059477_105063184_105063310_105065351
ENSMUSG00000031232.18_0	chrX	-	4097	11	FSM	ENSMUSG00000031232.18	ENSMUST00000033583.14	4115	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCTAAATTACATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	105055497	105011699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_105014633_105015041_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUSG00000031232.18_1	chrX	-	4504	10	FSM	ENSMUSG00000031232.18	ENSMUST00000238718.2	4524	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCTAAATTACATGGTT	NA	NA	NA	NA	NA	NA	NA	NA	105055495	105011699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_105015086_105017790_105017882_105023011_105023087_105027315_105027380_105027971_105028062_105032576_105032718_105032995_105033137_105036003_105036122_105040427_105040598_105055267
ENSMUSG00000031239.6_0	chrX	-	1711	6	FSM	ENSMUSG00000031239.6	ENSMUST00000033591.6	1744	6	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAATCCACTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	106446959	106440714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_106441586_106441701_106441853_106442376_106442488_106442701_106442900_106443172_106443305_106446711
ENSMUSG00000031241.18_0	chrX	+	1679	8	FSM	ENSMUSG00000031241.18	ENST00000373294.8	1691	8	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAACTTAACAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	106720466	106729186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_106720644_106721208_106721384_106722157_106722260_106723713_106723889_106724746_106724912_106725241_106725307_106725720_106725807_106728452
ENSMUSG00000031242.8_0	chrX	-	5826	8	FSM	ENSMUSG00000031242.8	ENSMUST00000120722.2	5842	8	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAAATTGGCTGTACTC	NA	NA	NA	NA	NA	NA	NA	NA	106859932	106826364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_106831460_106831871_106831945_106834341_106834386_106836504_106836613_106836698_106836768_106837113_106837261_106851397_106851496_106859740
ENSMUSG00000031245.9_0	chrX	-	1915	6	FSM	ENSMUSG00000031245.9	ENSMUST00000033597.9	1934	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATATGATTATGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108057001	108048149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_108049678_108051767_108051903_108054159_108054214_108054462_108054493_108055027_108055052_108056857
ENSMUSG00000031246.15_0	chrX	+	2867	4	FSM	ENSMUSG00000031246.15	ENSMUST00000033598.9	2882	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATGTTTGATTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108138980	108206072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_108139244_108193520_108193707_108197911_108197993_108203735
ENSMUSG00000031250.9_0	chrX	+	1323	7	FSM	ENSMUSG00000031250.9	ENSMUST00000033602.9	1353	7	19	11	19	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATCATCAATGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	132751747	132766315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132752004_132752170_132752303_132760471_132760613_132760829_132760932_132763610_132763765_132765472_132765640_132765944
ENSMUSG00000031253.16_0	chrX	+	2279	12	FSM	ENSMUSG00000031253.16	ENSMUST00000033606.15	2290	12	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTGTTGTAAATGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	132809184	132832562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132809528_132809701_132809754_132811265_132811481_132816056_132816144_132824384_132824577_132826555_132826733_132826985_132827113_132827821_132827944_132829319_132829500_132829804_132829939_132830925_132831048_132832034
ENSMUSG00000031253.16_3	chrX	+	2831	11	FSM	ENSMUSG00000031253.16	ENSMUST00000113304.2	2848	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATGGCATAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132809206	132833188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132809528_132811265_132811481_132816056_132816144_132824384_132824577_132826555_132826733_132826985_132827113_132827821_132827944_132829319_132829500_132829804_132829939_132830925_132831048_132832034
ENSMUSG00000031255.15_0	chrX	-	3512	16	FSM	ENSMUSG00000031255.15	ENST00000276141.10	3523	16	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCGAGTGTTTACATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	132862975	132837153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_132838800_132841071_132841281_132841990_132842091_132844308_132844418_132848485_132848648_132849439_132849543_132849795_132849975_132851020_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015_132853118_132861415_132861522_132861757_132861868_132862431_132862648_132862873
ENSMUSG00000031255.15_20	chrX	-	3410	10	FSM	ENSMUSG00000031255.15	ENST00000372981.1	3436	10	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATTTCTTCTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	132862967	132848340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_132848965_132849230_132851117_132851859_132851964_132852075_132852154_132852483_132852574_132853015_132853118_132861415_132861522_132861757_132861868_132862431_132862648_132862873
ENSMUSG00000031256.12_0	chrX	+	3648	14	FSM	ENSMUSG00000031256.12	ENSMUST00000113287.8	3661	14	8	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCACGTTCATGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	132959943	132986790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973962_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031256.12_1	chrX	+	4474	14	FSM	ENSMUSG00000031256.12	ENSMUST00000033609.9	4502	14	16	12	-2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTTTAAAAGTCACCCTA	NA	NA	NA	NA	NA	NA	NA	NA	132959961	132987556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261_132975555_132981075_132981187_132981939_132982066_132984980
ENSMUSG00000031256.12_2	chrX	+	2700	11	FSM	ENSMUSG00000031256.12	ENSMUST00000113286.8	2717	11	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCAAGTTTTGCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	132959979	132976611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_132960172_132961392_132961472_132961693_132961864_132962442_132962580_132963116_132963237_132963346_132963485_132967009_132967134_132970593_132970657_132973884_132974027_132974874_132975060_132975261
ENSMUSG00000031262.13_0	chrX	+	3216	23	FSM	ENSMUSG00000031262.13	ENSMUST00000081064.12	3227	23	8	3	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133208840	133263385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133208978_133209314_133209383_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031262.13_16	chrX	+	3007	21	ISM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	570	6	570	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGGGGTATTTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	133209473	133263379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031262.13_17	chrX	+	2179	18	FSM	ENSMUSG00000031262.13	ENST00000423383.3	2198	18	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCAATCCTGCCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	133212750	133262959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133262631
ENSMUSG00000031262.13_8	chrX	+	3084	22	FSM	ENSMUSG00000031262.13	ENSMUST00000101251.8	3085	22	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGTATTTCCGAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133208904	133263385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133208978_133209475_133209597_133210889_133211122_133212739_133212878_133218359_133218479_133218773_133218882_133225509_133225559_133225839_133225887_133236833_133236924_133237259_133237389_133237958_133238121_133238351_133238473_133239502_133239595_133240582_133240701_133241096_133241162_133243824_133243920_133247973_133248110_133249908_133250034_133251815_133251865_133251993_133252213_133261963_133262006_133262631
ENSMUSG00000031266.8_0	chrX	-	3011	7	FSM	ENSMUSG00000031266.8	ENSMUST00000239113.2	3015	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGAAAATAAAAAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	133501754	133488938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUSG00000031266.8_1	chrX	-	1319	8	FSM	ENSMUSG00000031266.8	ENST00000649178.1	1334	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGATAAACTACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	133501643	133490625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133490877_133491694_133491893_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133498865_133498972_133501486
ENSMUSG00000031266.8_2	chrX	-	1017	6	FSM	ENSMUSG00000031266.8	ENST00000675592.1	1030	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGATAAACTACTATAT	NA	NA	NA	NA	NA	NA	NA	NA	133501645	133490625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133490877_133492813_133492976_133494382_133494475_133495928_133496107_133497023_133497199_133501486
ENSMUSG00000031274.17_2	chrX	+	5754	51	FSM	ENSMUSG00000031274.17	ENST00000361603.7	5774	51	9	11	9	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGACAGCAAGATATACAT	NA	NA	NA	NA	NA	NA	NA	NA	140258624	140471710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_140258812_140321708_140321769_140328659_140328750_140341790_140341836_140354833_140354879_140354961_140355025_140358983_140359038_140359381_140359409_140361667_140361749_140363555_140363619_140366056_140366093_140366182_140366225_140366388_140366482_140366919_140366974_140367066_140367124_140367562_140367608_140371918_140371973_140373105_140373148_140374922_140375056_140382674_140382849_140383170_140383255_140392818_140392912_140394170_140394242_140395416_140395609_140396484_140396654_140398025_140398119_140398214_140398320_140399542_140399641_140401113_140401265_140409826_140409941_140412971_140413140_140414268_140414359_140415541_140415692_140418849_140418949_140420221_140420312_140422131_140422272_140427814_140427942_140436366_140436448_140437177_140437277_140438247_140438299_140439680_140439867_140449837_140449972_140452023_140452097_140452599_140452672_140456270_140456400_140456649_140456749_140458707_140458921_140466537_140466716_140469099_140469215_140469561_140469735_140471038
ENSMUSG00000031278.13_0	chrX	-	4938	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112903.8	4956	16	13	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	141173487	141100993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134612_141143382_141143433_141173300
ENSMUSG00000031278.13_1	chrX	-	5262	16	FSM	ENSMUSG00000031278.13	ENSMUST00000033634.5	5280	16	13	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	141173518	141100993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ENSMUSG00000031278.13_2	chrX	-	5086	15	ISM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	29866	5	29866	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	141143474	141100993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382
ENSMUSG00000031278.13_24	chrX	-	5051	15	FSM	ENSMUSG00000031278.13	ENST00000682031.1	5073	15	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATAAAAATAAATCCACCC	NA	NA	NA	NA	NA	NA	NA	NA	141173488	141101018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122037_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143433_141173300
ENSMUSG00000031278.13_3	chrX	-	5127	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112907.8	5137	16	0	10	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATCAAGCCAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	141173340	141100998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141143382_141143481_141173300
ENSMUSG00000031278.13_37	chrX	-	4976	15	FSM	ENSMUSG00000031278.13	ENST00000502391.6	4992	15	15	1	-12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGAGAAGCTGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	141173512	141101223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134905_141173300
ENSMUSG00000031278.13_4	chrX	-	4946	16	FSM	ENSMUSG00000031278.13	ENSMUST00000112904.8	4959	16	8	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCCAGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	141173492	141100993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141103831_141110971_141111130_141111843_141111959_141115187_141115380_141116665_141116741_141121879_141122053_141122945_141123086_141124330_141124403_141126069_141126194_141126302_141126454_141128423_141128563_141131997_141132108_141133955_141134134_141134374_141134615_141143382_141143433_141173300
ENSMUSG00000031283.17_0	chrX	-	1518	10	FSM	ENSMUSG00000031283.17	ENST00000394797.8	1534	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTTTAAAGTAAGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	142151451	142070611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_142070993_142074090_142074181_142077169_142077335_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917_142111061_142148892_142148987_142151347
ENSMUSG00000031283.17_2	chrX	-	1313	10	FSM	ENSMUSG00000031283.17	ENST00000444321.2	1329	10	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGCTCCAAAACCCAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	142151445	142070813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_142070993_142074090_142074181_142077169_142077338_142082849_142083060_142086344_142086514_142094077_142094146_142108984_142109079_142110917_142111061_142148892_142148987_142151347
ENSMUSG00000031284.17_0	chrX	+	8324	16	FSM	ENSMUSG00000031284.17	ENSMUST00000033640.14	8348	16	3	21	3	-21	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACGACAAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	142301589	142580767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_142301760_142476282_142476485_142492643_142492745_142496889_142496935_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263_142548377_142549789_142549908_142557357_142557458_142557933_142558131_142572305_142572444_142574230
ENSMUSG00000031284.17_10	chrX	+	8586	18	FSM	ENSMUSG00000031284.17	ENSMUST00000112864.8	8612	18	5	21	5	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACGACAAACATCA	NA	NA	NA	NA	NA	NA	NA	NA	142448745	142580767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_142448840_142454008_142454040_142455597_142455890_142461087_142461148_142476282_142476485_142492643_142492745_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263_142548377_142549789_142549908_142557357_142557458_142557933_142558131_142572305_142572444_142574230
ENSMUSG00000031284.17_13	chrX	+	8107	14	FSM	ENSMUSG00000031284.17	ENSMUST00000172330.3	8135	14	15	13	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAATGTTCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	142476296	142580779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_142476485_142492643_142492745_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263_142548377_142549789_142549908_142557357_142557458_142557933_142558131_142572305_142572444_142574230
ENSMUSG00000031284.17_2	chrX	+	8152	15	FSM	ENSMUSG00000031284.17	ENSMUST00000112868.8	8163	15	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACATCAATGTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	142447285	142580777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_142447319_142476282_142476485_142492643_142492745_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263_142548377_142549789_142549908_142557357_142557458_142557933_142558131_142572305_142572444_142574230
ENSMUSG00000031284.17_3	chrX	+	2488	17	FSM	ENSMUSG00000031284.17	ENST00000519681.5	2516	17	8	20	8	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAAACCAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	142448697	142574794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_142448840_142454557_142454705_142476282_142476485_142492643_142492745_142495273_142495337_142498131_142498286_142499106_142499145_142516067_142516200_142518252_142518419_142526933_142526998_142547957_142548007_142548263_142548377_142549789_142549908_142557357_142557458_142557933_142558131_142572305_142572444_142574230
ENSMUSG00000031286.7_0	chr3	-	2714	2	FSM	ENSMUSG00000031286.7	ENSMUST00000033643.6	2732	2	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCAGAAATCCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85794816	85777166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_85779498_85794433
ENSMUSG00000031289.11_0	chrX	-	2249	14	FSM	ENSMUSG00000031289.11	ENSMUST00000033646.9	2281	14	21	11	21	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCTCAAGTTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	146212167	146166482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_146166674_146167439_146167556_146171209_146171355_146172658_146172805_146173834_146174020_146177318_146177440_146178007_146178162_146179092_146179245_146180867_146180977_146183817_146183926_146186728_146186921_146189027_146189144_146190820_146190899_146211731
ENSMUSG00000031295.14_0	chrX	+	3909	34	FSM	ENSMUSG00000031295.14	ENSMUST00000112377.8	3947	34	36	2	36	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	159285197	159374135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_159285289_159285742_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ENSMUSG00000031295.14_4	chrX	+	4109	33	FSM	ENSMUSG00000031295.14	ENSMUST00000033652.9	4133	33	22	2	-9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCATTTGTAGACTC	NA	NA	NA	NA	NA	NA	NA	NA	159285451	159374135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159373934
ENSMUSG00000031295.14_5	chrX	+	4330	33	FSM	ENSMUSG00000031295.14	ENSMUST00000112380.9	4341	33	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTATAAGCCTCTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	159285435	159381869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462_159341573_159342726_159342872_159343095_159343175_159345718_159345889_159347181_159347356_159357638_159357728_159358775_159358910_159359597_159359755_159360491_159360572_159360763_159360843_159360943_159361074_159361588_159361691_159364156_159364276_159365962_159365993_159367459_159367514_159369774_159369946_159371960_159372015_159373163_159373365_159381463
ENSMUSG00000031295.14_8	chrX	+	2282	15	FSM	ENSMUSG00000031295.14	ENSMUST00000112376.2	2310	15	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATATGATATGTCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	159285484	159341947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_159285901_159306267_159306427_159310725_159310774_159311842_159312012_159312910_159312994_159314103_159314185_159315974_159316074_159324364_159324512_159326629_159326684_159327207_159327331_159332170_159332267_159335708_159335817_159337296_159337376_159340681_159340817_159341462
ENSMUSG00000031297.15_0	chrX	-	2215	12	FSM	ENSMUSG00000031297.15	ENSMUST00000073927.5	2232	12	12	5	-8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTGTAAAAAAAAAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	100128966	100122832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877
ENSMUSG00000031297.15_2	chrX	-	2132	11	ISM	ENSMUSG00000031297.15	ENSMUST00000101362.8	2371	13	1077	1	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACCAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	100127881	100122827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476
ENSMUSG00000031297.15_3	chrX	-	2720	13	FSM	ENSMUSG00000031297.15	ENSMUST00000113710.8	2750	13	17	13	17	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAATTGTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100129609	100122840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100123199_100123305_100123415_100123706_100123874_100124313_100124478_100125301_100125405_100125498_100125639_100125796_100126020_100126139_100126253_100126396_100126575_100126753_100126913_100127476_100127881_100128877_100129064_100129193
ENSMUSG00000031298.16_0	chrX	+	4626	27	FSM	ENSMUSG00000031298.16	ENSMUST00000112401.8	4632	27	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCCTTTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	159173719	159281060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_159173746_159213345_159213391_159221190_159221310_159239000_159239034_159241830_159241870_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ENSMUSG00000031298.16_1	chrX	+	4599	26	ISM	ENSMUSG00000031298.16	ENSMUST00000112401.8	4632	27	39627	6	3059	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCCTTTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	159213346	159281060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_159213391_159221190_159221310_159239000_159239034_159241830_159241870_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ENSMUSG00000031298.16_3	chrX	+	4558	25	ISM	ENSMUSG00000031298.16	ENSMUST00000112401.8	4632	27	47468	6	10900	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGTCCTTTAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	159221187	159281060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_159221310_159239000_159239034_159241830_159241870_159244338_159244378_159248573_159248628_159251887_159251944_159252763_159252820_159254751_159254792_159255307_159255346_159257699_159257795_159258486_159258554_159260044_159260437_159261980_159262144_159263222_159263380_159264542_159264687_159265284_159265408_159266078_159266125_159266229_159266334_159267135_159267258_159268639_159268909_159270661_159270762_159271679_159271964_159274393_159274496_159275595_159275749_159279300
ENSMUSG00000031299.11_0	chrX	-	2833	11	FSM	ENSMUSG00000031299.11	ENSMUST00000033662.9	2848	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3009	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTACAGTTCTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	158921401	158905211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_158906944_158907514_158907624_158909189_158909258_158910286_158910359_158910568_158910725_158911460_158911554_158912405_158912498_158913104_158913232_158915064_158915239_158916168_158916229_158921251
ENSMUSG00000031302.17_0	chrX	+	3822	6	FSM	ENSMUSG00000031302.17	ENST00000536169.5	3837	6	9	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAACCTGCCTCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	100342777	100364948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100342903_100345390_100346038_100352362_100352513_100358737_100358924_100361534_100362325_100363024
ENSMUSG00000031303.9_0	chrX	+	3799	29	FSM	ENSMUSG00000031303.9	ENST00000338883.9	3819	29	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACGGTAAGAGAGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	158771508	158905600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158771802_158784900_158785041_158787158_158787183_158823985_158824180_158827056_158827226_158829612_158829720_158855833_158856005_158858590_158858704_158859124_158859285_158862909_158863061_158864780_158864889_158866859_158866910_158869313_158869410_158872799_158872888_158874576_158874711_158877291_158877420_158880972_158881104_158881316_158881423_158895401_158895560_158898054_158898239_158898880_158899047_158899514_158899690_158900650_158900837_158901536_158901643_158902505_158902586_158902623_158902720_158904641_158904755_158905357_158905459_158905529
ENSMUSG00000031304.19_0	chrX	-	1650	8	FSM	ENSMUSG00000031304.19	ENSMUST00000033664.14	1670	8	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAAGAATGTCTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	100311852	100307994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100308644_100308981_100309049_100309235_100309333_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUSG00000031304.19_1	chrX	-	1126	7	FSM	ENSMUSG00000031304.19	ENST00000374188.7	1144	7	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACGCTAACCTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	100311848	100308417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100308644_100308981_100309049_100309786_100309950_100310583_100310727_100310916_100311102_100311316_100311471_100311660
ENSMUSG00000031309.16_0	chrX	+	2659	22	FSM	ENSMUSG00000031309.16	ENST00000646610.1	2666	22	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTCATATACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	158038655	158146926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158038716_158068261_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031309.16_10	chrX	+	2755	21	FSM	ENSMUSG00000031309.16	ENST00000457145.6	2777	21	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATCTGGATAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	158086270	158147013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158086397_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031309.16_7	chrX	+	2598	21	ISM	ENSMUSG00000031309.16	ENST00000646610.1	2666	22	29609	5	-17995	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTTCATATACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	158068262	158146926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_158068319_158094459_158094577_158100916_158100999_158109836_158109918_158110767_158110848_158111366_158111474_158113553_158113592_158113782_158113926_158115146_158115218_158119690_158119780_158119958_158120024_158120181_158120285_158120913_158121039_158125580_158125707_158128335_158128426_158130011_158130171_158132247_158132410_158134359_158134437_158135311_158135430_158145637_158145779_158146358
ENSMUSG00000031310.17_5	chrX	-	1838	7	FSM	ENSMUSG00000031310.17	ENSMUST00000120201.8	1859	7	13	8	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACCCAGCCTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	100463402	100458543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460588_100460892_100460937_100461878_100462559_100463303
ENSMUSG00000031310.17_7	chrX	-	1816	7	FSM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	6	10	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGACAAACCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100463852	100458548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878_100462559_100463764
ENSMUSG00000031310.17_9	chrX	-	1730	6	ISM	ENSMUSG00000031310.17	ENST00000373981.5	1832	7	1298	10	844	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGACAAACCCAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	100462560	100458548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_100459013_100459366_100459545_100459772_100460068_100460514_100460582_100460892_100460937_100461878
ENSMUSG00000031311.18_0	chrX	+	2552	12	FSM	ENSMUSG00000031311.18	ENSMUST00000033673.7	2562	12	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5703	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTGTGCTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100473169	100492196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100473369_100474098_100474159_100480814_100480984_100483092_100483287_100485121_100485424_100486535_100486632_100486900_100487098_100487882_100487968_100488293_100488397_100488900_100488941_100489724_100489835_100491199
ENSMUSG00000031312.6_1	chrX	+	1371	10	FSM	ENSMUSG00000031312.6	ENST00000538820.1	1390	10	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTAAAGGAGGAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	100492784	100497071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100493117_100493210_100493268_100493346_100493493_100495192_100495288_100495391_100495451_100495559_100495631_100495720_100495821_100496079_100496194_100496433_100496497_100496737
ENSMUSG00000031314.19_0	chrX	+	7191	38	FSM	ENSMUSG00000031314.19	ENSMUST00000118878.8	7210	38	6	13	-1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCAATAGAATCGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100576345	100644627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ENSMUSG00000031314.19_3	chrX	+	8037	41	FSM	ENSMUSG00000031314.19	ENSMUST00000101341.9	8054	41	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAGTACAGGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	100576355	100645387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584428_100584608_100586069_100586289_100586656_100586876_100587553_100587764_100588098_100588157_100589944_100589975_100590573_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100604539_100604555_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638905_100639063_100639693_100639872_100642914
ENSMUSG00000031314.19_6	chrX	+	6143	40	FSM	ENSMUSG00000031314.19	ENST00000683782.1	6152	40	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGCCTTGTTTCAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100576494	100644082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100576608_100577100_100577216_100577350_100577468_100582673_100582794_100584365_100584608_100586069_100586289_100586656_100586876_100587553_100587762_100590564_100590742_100591538_100591667_100591765_100591874_100591968_100592143_100592680_100592855_100593308_100593414_100595954_100596156_100596295_100596438_100596771_100596903_100598208_100598290_100600127_100600278_100600429_100600550_100600780_100600957_100603371_100603551_100605679_100605894_100606419_100606586_100607133_100607346_100611022_100611132_100612064_100612164_100613400_100613579_100618990_100619059_100620186_100620310_100621805_100621899_100621977_100622063_100633553_100633622_100634078_100634196_100637545_100637672_100638553_100638646_100638905_100639063_100639693_100639872_100642914_100643133_100643641
ENSMUSG00000031320.10_0	chrX	-	961	7	FSM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	24231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTACTTTTGGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101232993	101228553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899_101231978_101232903
ENSMUSG00000031320.10_1	chrX	-	872	6	ISM	ENSMUSG00000031320.10	ENSMUST00000033683.8	975	7	1022	7	1022	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTACTTTTGGTTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101231978	101228553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_101228738_101229108_101229267_101230001_101230174_101230960_101231059_101231427_101231609_101231899
ENSMUSG00000031327.11_0	chrX	+	7368	6	FSM	ENSMUSG00000031327.11	ENSMUST00000116547.3	7375	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTACTGAGTTGAACCGT	NA	NA	NA	NA	NA	NA	NA	NA	102400081	102439691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_102400496_102409819_102409875_102417204_102417361_102430860_102430918_102431592_102431653_102433065
ENSMUSG00000031328.17_0	chrX	-	8448	47	FSM	ENSMUSG00000031328.17	ENSMUST00000114299.8	8456	47	6	2	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	73293420	73267068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669_73290158_73293334
ENSMUSG00000031328.17_1	chrX	-	8338	46	FSM	ENSMUSG00000031328.17	ENSMUST00000101454.9	8345	46	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGCTTTCATGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	73290133	73267068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73271691_73271845_73271926_73272131_73272365_73272528_73272624_73272799_73272986_73273116_73273431_73273573_73273661_73273765_73273906_73274003_73274111_73274360_73276754_73276945_73277527_73277685_73277768_73277893_73278209_73278381_73278470_73278632_73278715_73278879_73278961_73279136_73279225_73279824_73280348_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031328.17_18	chrX	-	5069	29	FSM	ENSMUSG00000031328.17	ENST00000422373.6	5080	29	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTGAATGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	73290067	73267079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73267584_73268357_73268562_73268645_73268865_73269003_73269181_73269807_73269941_73270466_73270583_73270803_73270942_73271096_73271364_73271457_73271581_73280392_73280612_73280727_73280846_73281026_73281197_73281287_73281379_73281461_73281623_73281709_73281834_73282704_73282849_73282939_73283054_73283257_73283452_73283551_73283689_73283810_73283935_73284018_73284157_73284708_73284910_73284992_73285156_73285248_73285327_73285406_73285526_73286097_73286246_73286333_73286432_73286522_73286772_73289669
ENSMUSG00000031333.8_0	chrX	-	1890	13	FSM	ENSMUSG00000031333.8	ENST00000620875.5	1896	13	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACACAGACATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103386185	103327650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875_103349009_103386099
ENSMUSG00000031333.8_1	chrX	-	1805	12	ISM	ENSMUSG00000031333.8	ENST00000620875.5	1896	13	37180	2	37180	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACACAGACATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103349009	103327650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_103327865_103334728_103334837_103338073_103338178_103339436_103339609_103343374_103343505_103343655_103343820_103344376_103344535_103345399_103345575_103346557_103346646_103346734_103346824_103347737_103348007_103348875
ENSMUSG00000031337.17_0	chrX	+	3273	14	FSM	ENSMUSG00000031337.17	ENSMUST00000025391.11	3286	14	0	13	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAACAGTATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	70258611	70358888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70346106_70346221_70351305_70351483_70357251
ENSMUSG00000031337.17_1	chrX	+	3373	15	FSM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	0	6	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGTATTTCCAGGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70258611	70358895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70258689_70274996_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUSG00000031337.17_4	chrX	+	3198	13	ISM	ENSMUSG00000031337.17	ENSMUST00000025391.11	3286	14	16383	13	16307	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTAACAGTATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	70274994	70358888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70346106_70346221_70351305_70351483_70357251
ENSMUSG00000031337.17_5	chrX	+	3284	14	ISM	ENSMUSG00000031337.17	ENSMUST00000061970.12	3379	15	16383	20	16307	10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAACTAAAACCTAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	70274994	70358881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_70275068_70276677_70276751_70278457_70278553_70297856_70297968_70303330_70303433_70328206_70328291_70330757_70330908_70335354_70335544_70339769_70339956_70343173_70343381_70345339_70345433_70346106_70346221_70351305_70351483_70357251
ENSMUSG00000031342.18_0	chrX	+	4451	7	FSM	ENSMUSG00000031342.18	ENSMUST00000112235.8	4480	7	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCATTCGCTTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	165021928	165171977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_165022133_165155633_165155821_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_2	chrX	+	986	7	FSM	ENSMUSG00000031342.18	ENST00000398361.7	992	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGAAAAGGATTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	165022300	165168674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_165022343_165155633_165155821_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031342.18_5	chrX	+	937	6	ISM	ENSMUSG00000031342.18	ENSMUST00000112223.8	4764	8	27953	3310	27953	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTGAAAAGGATTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	165155640	165168674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_165155821_165158628_165158786_165162983_165163156_165165444_165165519_165166930_165166997_165168386
ENSMUSG00000031347.13_0	chrX	-	1278	5	FSM	ENSMUSG00000031347.13	ENSMUST00000114551.10	1286	5	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGATTTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	71962009	71957137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293_71960453_71961919
ENSMUSG00000031347.13_1	chrX	-	1188	4	FSM	ENSMUSG00000031347.13	ENSMUST00000033713.11	1026	4	9	-171	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACTTGTGGATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	71960453	71957138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_71957900_71958445_71958584_71959870_71960000_71960293
ENSMUSG00000031349.5_0	chrX	+	2140	8	FSM	ENSMUSG00000031349.5	ENSMUST00000033715.5	2168	8	12	16	12	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAAAGCCATACA	NA	NA	NA	NA	NA	NA	NA	NA	71962174	72002104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_71962300_71969899_71970017_71973229_71973389_71992770_71992918_71996448_71996578_71998677_71998821_71999942_72000046_72000887
ENSMUSG00000031352.11_0	chrX	-	2303	7	FSM	ENSMUSG00000031352.11	ENSMUST00000033717.9	2320	7	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	168103262	168094528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168103110
ENSMUSG00000031352.11_1	chrX	-	2449	7	FSM	ENSMUSG00000031352.11	ENSMUST00000112115.2	2473	7	21	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTTAGAGTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	168103269	168094528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_168096019_168096583_168096671_168098597_168098718_168099541_168099691_168099991_168100144_168102433_168102587_168102971
ENSMUSG00000031353.14_0	chrX	+	2228	12	FSM	ENSMUSG00000031353.14	ENSMUST00000033720.12	2244	12	11	5	-8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAAACTATATCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	161543408	161562083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_161543704_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031353.14_12	chrX	+	2020	12	FSM	ENSMUSG00000031353.14	ENST00000380084.8	2039	12	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTAAAATAAAGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	161543900	161561778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_161544293_161544570_161544716_161551847_161551994_161552759_161552934_161554048_161554165_161555200_161555362_161556191_161556319_161556436_161556515_161557548_161557626_161558731_161558790_161560767_161560879_161561343
ENSMUSG00000031357.4_0	chrX	-	2068	9	FSM	ENSMUSG00000031357.4	ENSMUST00000033723.4	2087	9	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATTATCCTTTATAGA	NA	NA	NA	NA	NA	NA	NA	NA	161671432	161640060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_161641005_161642294_161642443_161642868_161642928_161646055_161646205_161655510_161655651_161661326_161661401_161665675_161665743_161665963_161666083_161671064
ENSMUSG00000031358.18_0	chrX	-	2383	13	FSM	ENSMUSG00000031358.18	ENSMUST00000033725.16	2399	13	13	3	13	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAGAGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	167456881	167437115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167455258_167455342_167456723
ENSMUSG00000031358.18_1	chrX	-	2302	12	FSM	ENSMUSG00000031358.18	ENSMUST00000112137.2	2316	12	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAAGAGGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	167456883	167437115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167453215_167453308_167454138_167454240_167454790_167454887_167456723
ENSMUSG00000031358.18_7	chrX	-	1391	11	FSM	ENSMUSG00000031358.18	ENST00000649685.1	1407	11	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTGCACTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	167455331	167437847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167454138_167454240_167454790_167454887_167455258
ENSMUSG00000031358.18_8	chrX	-	1317	10	ISM	ENSMUSG00000031358.18	ENST00000649685.1	1407	11	450	12	450	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACAACTGCACTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	167454885	167437847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_167437965_167439958_167440044_167441610_167441711_167445426_167445537_167447038_167447302_167449938_167450098_167451626_167451788_167452485_167452612_167454138_167454240_167454790
ENSMUSG00000031360.15_0	chrX	+	3266	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112303.8	3289	19	17	6	-10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAAGTATGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	161684617	161815315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_161684836_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_16	chrX	+	3093	19	FSM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAAGTATGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	161684865	161815315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_161684911_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_24	chrX	+	3042	18	ISM	ENSMUSG00000031360.15	ENSMUST00000112301.8	3099	19	1570	6	1570	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAAGTATGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	161686435	161815315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031360.15_6	chrX	+	3339	19	FSM	ENSMUSG00000031360.15	ENSMUST00000033727.14	3353	19	7	7	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTCTACATGGGCAGACT	NA	NA	NA	NA	NA	NA	NA	NA	161684634	161815497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_161684744_161686429_161686635_161693004_161693176_161696203_161696305_161704194_161704312_161704445_161704530_161705385_161705467_161710400_161710553_161714622_161714756_161717282_161717372_161719706_161719802_161724642_161724706_161724796_161724841_161758178_161758276_161779700_161779757_161783057_161783155_161794057_161794203_161812762_161812875_161814109
ENSMUSG00000031365.14_0	chrX	+	6276	5	FSM	ENSMUSG00000031365.14	ENSMUST00000114499.8	6284	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCATAGGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72386226	72402678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72386358_72388442_72388519_72395414_72395530_72396441_72396544_72396826
ENSMUSG00000031365.14_1	chrX	+	6353	6	FSM	ENSMUSG00000031365.14	ENSMUST00000033731.4	6376	6	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGCATAGGTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72386241	72402678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72386358_72388442_72388519_72394874_72394967_72395414_72395530_72396441_72396544_72396826
ENSMUSG00000031367.16_0	chrX	+	1782	5	FSM	ENSMUSG00000031367.16	ENSMUST00000033734.14	1785	5	3	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGTGGTGTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	162692140	162716355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_162692270_162694324_162694504_162699470_162699580_162700701_162700840_162715128
ENSMUSG00000031367.16_3	chrX	+	1683	5	FSM	ENSMUSG00000031367.16	ENST00000450644.2	1707	5	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTGTGTTTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	162694339	162712429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_162694504_162699470_162699580_162700701_162700840_162711021_162712044_162712179
ENSMUSG00000031370.13_0	chrX	-	2725	11	FSM	ENSMUSG00000031370.13	ENSMUST00000112289.9	2735	11	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTTATTTCTTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	162741577	162718440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUSG00000031370.13_4	chrX	-	1261	9	FSM	ENSMUSG00000031370.13	ENST00000307771.8	1267	9	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATGTCTGTCTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	162737477	162719270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162719364_162719526_162719962_162722301_162722412_162723114_162723171_162726095_162726310_162732255_162732375_162733182_162733222_162736565_162736653_162737369
ENSMUSG00000031370.13_8	chrX	-	3851	5	FSM	ENSMUSG00000031370.13	ENSMUST00000090840.10	3867	5	8	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTCTATATCTTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	162741586	162733389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162736653_162737369_162737479_162739467_162739550_162740911_162740992_162741269
ENSMUSG00000031371.15_0	chrX	-	1360	10	FSM	ENSMUSG00000031371.15	ENSMUST00000033737.15	1380	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAAGACGTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72502638	72480928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72491565_72491663_72491797_72491957_72492416_72492509_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUSG00000031371.15_1	chrX	-	1019	7	FSM	ENSMUSG00000031371.15	ENSMUST00000077243.5	1032	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTAAGACGTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72502645	72480928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72481172_72489415_72489531_72490533_72490744_72496604_72496667_72498472_72498541_72501579_72501696_72502440
ENSMUSG00000031373.5_0	chrX	-	3434	8	FSM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	0	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCACAAGAAAAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	162810993	162759819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420_162773517_162774346_162774466_162783234_162783433_162797798_162797991_162810930
ENSMUSG00000031373.5_1	chrX	-	3369	7	ISM	ENSMUSG00000031373.5	ENSMUST00000033739.5	3436	8	13005	2	13005	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCACAAGAAAAGAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	162797988	162759819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_162762367_162770093_162770250_162771345_162771409_162773420_162773517_162774346_162774466_162783234_162783433_162797798
ENSMUSG00000031375.18_2	chrX	+	2405	8	FSM	ENSMUSG00000031375.18	ENSMUST00000033741.15	2419	8	10	4	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGAGTCTGTGTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	72527217	72539535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72527369_72534384_72534637_72534923_72535037_72535553_72535768_72536328_72536440_72536568_72536663_72536805_72536945_72538204
ENSMUSG00000031376.16_0	chrX	+	3747	19	FSM	ENSMUSG00000031376.16	ENST00000393842.5	3758	19	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATGACCCCACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	72566445	72603801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72566769_72572250_72572449_72572547_72572806_72573231_72573358_72573902_72574029_72578961_72579127_72579737_72579953_72580490_72580734_72581681_72581924_72585791_72586027_72588668_72588849_72588970_72589059_72590065_72590173_72591248_72591441_72594557_72594772_72595059_72595272_72596405_72596514_72598658_72598842_72603469
ENSMUSG00000031378.15_0	chrX	+	3602	10	FSM	ENSMUSG00000031378.15	ENSMUST00000002084.14	3648	10	37	9	37	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACAATCCTGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	72760239	72782131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72761537_72764519_72764701_72772589_72772733_72772814_72772984_72774399_72774495_72777614_72777761_72778067_72778214_72780395_72780481_72780708_72780835_72780917
ENSMUSG00000031379.14_0	chrX	+	1587	10	FSM	ENSMUSG00000031379.14	ENSMUST00000033749.9	1599	10	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	810	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACATGTGCTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	163052435	163156004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163052674_163054598_163054728_163063124_163063218_163078910_163078995_163083219_163083427_163113010_163113096_163125469_163125515_163141143_163141227_163152041_163152109_163155448
ENSMUSG00000031380.11_0	chrX	+	1607	7	FSM	ENSMUSG00000031380.11	ENST00000297904.4	1625	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGCCCACTACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	163156349	163185195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163156916_163168814_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031380.11_5	chrX	+	2025	7	FSM	ENSMUSG00000031380.11	ENSMUST00000033751.8	2049	7	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACAGAAGTCAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	163156386	163185635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163156916_163168799_163169026_163174597_163174789_163177428_163177578_163178928_163179030_163183658_163183855_163185002
ENSMUSG00000031381.17_0	chrX	+	3584	6	FSM	ENSMUSG00000031381.17	ENSMUST00000033754.15	3594	6	0	10	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTCTTATTTTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	163202782	163216902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163202837_163205579_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUSG00000031381.17_1	chrX	+	3532	5	ISM	ENSMUSG00000031381.17	ENSMUST00000112255.8	3597	6	2676	4	1	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTATTTTTGTCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	163205580	163216905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_163206360_163210927_163211061_163211535_163211669_163211806_163212014_163214625
ENSMUSG00000031382.15_0	chrX	+	1171	7	FSM	ENSMUSG00000031382.15	ENST00000380470.7	1189	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGGACCCTCCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	163220042	163241996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163220222_163228724_163228805_163233501_163233559_163235894_163236046_163237383_163237519_163238792_163238985_163241619
ENSMUSG00000031386.15_0	chrX	-	8127	26	FSM	ENSMUSG00000031386.15	ENSMUST00000033761.13	8138	26	2	9	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	73009961	72986406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991121_72991447_72991893_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ENSMUSG00000031386.15_2	chrX	-	8253	26	FSM	ENSMUSG00000031386.15	ENSMUST00000114372.3	8262	26	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACCATCTGGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	73009952	72986406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72988084_72988251_72988316_72988738_72989040_72989729_72989916_72990315_72990454_72990540_72990657_72990796_72991124_72991447_72992025_72992507_72992672_72992803_72994308_72994848_72995070_72995259_72995399_72995531_72995675_72995778_72995999_72996167_72996273_72996431_72996657_72996930_72997129_72998187_72998349_72998619_72998980_72999060_72999241_73000172_73000280_73000992_73001078_73001857_73002067_73002728_73002890_73003189_73003339_73009416
ENSMUSG00000031387.15_0	chrX	-	1407	11	FSM	ENSMUSG00000031387.15	ENSMUST00000116578.8	1418	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72974448	72965729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973792_72973869_72974013_72974124_72974319
ENSMUSG00000031387.15_1	chrX	-	1307	11	FSM	ENSMUSG00000031387.15	ENSMUST00000114379.8	1318	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTTGTGTGCGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72974390	72965729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72965870_72965956_72966045_72969821_72969954_72971418_72971595_72971884_72971967_72972721_72972947_72973286_72973460_72973610_72973687_72973834_72973869_72974013_72974124_72974319
ENSMUSG00000031388.15_0	chrX	-	944	8	FSM	ENSMUSG00000031388.15	ENSMUST00000033763.15	962	8	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATAGTGGGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	72965540	72960486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72960802_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUSG00000031388.15_1	chrX	-	1017	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114389.10	1031	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCATAGTGGGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	72965522	72960486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72960893_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUSG00000031388.15_2	chrX	-	966	8	FSM	ENSMUSG00000031388.15	ENSMUST00000114387.8	979	8	10	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTGTGAATGTGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	72965484	72960495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72960889_72961448_72961534_72963107_72963153_72963359_72963476_72963568_72963615_72964588_72964648_72964877_72964977_72965361
ENSMUSG00000031390.9_0	chrX	+	1146	2	FSM	ENSMUSG00000031390.9	ENST00000370049.1	1157	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGGATACACCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72936242	72937459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72937204_72937274
ENSMUSG00000031391.19_0	chrX	-	5110	27	FSM	ENSMUSG00000031391.19	ENSMUST00000114430.8	5126	27	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGAAGAGACCATTCC	NA	NA	NA	NA	NA	NA	NA	NA	72913504	72897392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72898873_72899364_72899438_72899748_72899887_72900237_72900400_72900508_72900629_72900773_72900948_72901026_72901150_72901243_72901446_72901647_72901764_72902908_72903132_72903307_72903379_72903624_72903823_72904044_72904156_72904325_72904451_72904653_72904811_72904911_72905079_72905187_72905300_72905883_72906028_72906165_72906298_72906453_72906639_72906762_72906875_72907764_72907936_72908029_72908153_72909222_72909423_72909660_72909767_72910627_72910643_72913334
ENSMUSG00000031392.19_0	chrX	-	3813	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114354.10	3835	14	16	6	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTATATGCCTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	73067508	73057525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUSG00000031392.19_1	chrX	-	3799	14	FSM	ENSMUSG00000031392.19	ENSMUST00000114352.8	3825	14	18	8	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCCAACCTATATGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	73067503	73057531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066268_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUSG00000031392.19_4	chrX	-	2851	15	FSM	ENSMUSG00000031392.19	ENSMUST00000033769.15	2890	15	12	27	12	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAATCTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73067507	73058603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73059108_73060153_73060304_73060735_73061118_73061506_73061624_73061735_73061973_73063505_73063572_73063933_73064142_73064548_73064668_73065454_73065570_73065790_73065856_73066078_73066271_73066454_73066559_73066671_73066804_73066971_73067140_73067215
ENSMUSG00000031393.17_0	chrX	-	10523	4	FSM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAAGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	73129267	73070204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73129115
ENSMUSG00000031393.17_1	chrX	-	10131	3	ISM	ENSMUSG00000031393.17	ENSMUST00000100750.10	10538	4	5638	246	5579	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTTACATAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	73123637	73070443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_73080101_73080587_73080939_73123514
ENSMUSG00000031393.17_2	chrX	-	10167	4	FSM	ENSMUSG00000031393.17	ENSMUST00000170481.9	10175	4	0	8	0	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTACATAAAAATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	73178969	73070441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73080101_73080587_73080939_73123514_73123639_73178936
ENSMUSG00000031393.17_4	chrX	-	1710	3	FSM	ENSMUSG00000031393.17	ENSMUST00000033770.13	1739	3	27	2	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACTTAGAGTTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	73129269	73078895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73080101_73080587_73080939_73129115
ENSMUSG00000031398.14_0	chrX	+	6930	33	FSM	ENSMUSG00000031398.14	ENSMUST00000004326.4	6943	33	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACTGTTTCCACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	73372683	73388294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73372822_73374574_73375199_73375572_73376113_73376573_73376757_73377152_73377282_73377351_73377453_73377830_73377955_73378037_73378195_73378278_73378379_73378648_73378764_73378903_73379105_73379375_73379473_73379606_73379798_73379882_73380029_73380097_73380219_73380324_73380462_73380577_73380749_73381011_73381106_73381186_73381427_73381516_73381661_73381739_73381975_73382064_73382208_73382295_73382553_73382675_73382743_73382847_73382995_73383071_73383232_73383380_73383485_73383670_73383768_73384036_73384228_73384448_73384619_73385141_73385355_73385526_73385678_73387052
ENSMUSG00000031399.16_0	chrX	-	1893	9	FSM	ENSMUSG00000031399.16	ENSMUST00000114143.10	1899	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAGAGTCAAGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	73436873	73428325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431358_73434079_73434104_73434596_73434711_73436280
ENSMUSG00000031399.16_1	chrX	-	805	8	FSM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGAGCTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	73436339	73428947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431444_73434590_73434711_73436280
ENSMUSG00000031399.16_2	chrX	-	741	7	ISM	ENSMUSG00000031399.16	ENST00000322269.10	811	8	1635	5	1635	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGAGCTCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	73434705	73428947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_73429042_73430027_73430155_73430237_73430323_73430639_73430691_73431043_73431103_73431233_73431444_73434590
ENSMUSG00000031400.11_0	chrX	-	2635	13	FSM	ENSMUSG00000031400.11	ENSMUST00000004327.11	2652	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTACCTGTCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	73472790	73453095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73453904_73454002_73454096_73454188_73454266_73454362_73454599_73454863_73455051_73455170_73455265_73455571_73455698_73455924_73456084_73457469_73457688_73458513_73458623_73458721_73458760_73471657_73471786_73472428
ENSMUSG00000031402.13_0	chrX	-	2510	12	FSM	ENSMUSG00000031402.13	ENSMUST00000033775.9	2525	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2470	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTTGCCAGTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	74174612	74153343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74154450_74155532_74155608_74155804_74156008_74157191_74157273_74157839_74157921_74159661_74159769_74161361_74161559_74165040_74165110_74167501_74167588_74168976_74169056_74169342_74169487_74174330
ENSMUSG00000031403.15_0	chrX	+	2792	15	FSM	ENSMUSG00000031403.15	ENSMUST00000033776.15	2804	15	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGAATTTGCTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74139470	74153382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_74139734_74140439_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149988_74150777_74150857_74151784_74151911_74152301
ENSMUSG00000031403.15_16	chrX	+	1537	13	FSM	ENSMUSG00000031403.15	ENST00000620277.4	1550	13	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGATATGAGAGATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	74140441	74152549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_74140508_74140888_74140976_74142067_74142160_74142368_74142554_74143635_74143701_74144038_74144166_74144595_74144727_74146027_74146172_74147945_74148067_74149259_74149379_74149883_74149910_74151784_74151911_74152301
ENSMUSG00000031410.15_0	chrX	-	2221	23	FSM	ENSMUSG00000031410.15	ENSMUST00000113163.8	2233	23	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTCCCTGGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134499520	134480309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_134480575_134480703_134480765_134483832_134484016_134484471_134484539_134485101_134485145_134485235_134485352_134485452_134485512_134485645_134485754_134485889_134485946_134486029_134486099_134486514_134486552_134487985_134488096_134488266_134488375_134488481_134488571_134488715_134488786_134488930_134489012_134489121_134489227_134489324_134489409_134489679_134489831_134490065_134490220_134493014_134493045_134494561_134494643_134499426
ENSMUSG00000031410.15_1	chrX	-	2127	22	FSM	ENSMUSG00000031410.15	ENSMUST00000033784.13	1863	22	-38	-226	-38	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGTTCCCTGGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134494642	134480309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_134480575_134480703_134480765_134483832_134484016_134484471_134484539_134485101_134485145_134485235_134485352_134485452_134485512_134485645_134485754_134485889_134485946_134486029_134486099_134486514_134486552_134487985_134488096_134488266_134488375_134488481_134488571_134488715_134488786_134488930_134489012_134489121_134489227_134489324_134489409_134489679_134489831_134490065_134490220_134493014_134493045_134494561
ENSMUSG00000031422.17_1	chrX	-	1842	4	FSM	ENSMUSG00000031422.17	ENSMUST00000080411.13	1859	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAGCAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	135642090	135633707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135641958
ENSMUSG00000031422.17_4	chrX	-	1760	3	FSM	ENSMUSG00000031422.17	ENSMUST00000169418.8	1782	3	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAGCAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	135642085	135633707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135635251_135640553_135640644_135641958
ENSMUSG00000031422.17_5	chrX	-	1800	4	FSM	ENSMUSG00000031422.17	ENSMUST00000164609.8	1811	4	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTCAAAGCAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	135643664	135633709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135635251_135636294_135636372_135640553_135640644_135643572
ENSMUSG00000031429.15_0	chrX	-	1413	5	FSM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCTCCCAATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	139857425	139849181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUSG00000031429.15_3	chrX	-	1367	5	FSM	ENSMUSG00000031429.15	ENSMUST00000112978.2	1390	5	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATCTCCCAATTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	139857458	139849181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_139850059_139852974_139853063_139853153_139853301_139854548_139854648_139857302
ENSMUSG00000031429.15_5	chrX	-	529	4	ISM	ENSMUSG00000031429.15	ENSMUST00000033805.15	1430	5	2804	752	8	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTCAAGAGACTAGCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	139854634	139849929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_139850059_139852895_139853063_139853153_139853301_139854548
ENSMUSG00000031429.15_6	chrX	-	436	3	ISM	ENSMUSG00000031429.15	ENST00000436861.1	547	4	1346	13	1346	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTCAAGAGACTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	139853296	139849932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_139850059_139852895_139853063_139853153
ENSMUSG00000031430.9_0	chrX	+	931	6	FSM	ENSMUSG00000031430.9	ENST00000415430.7	943	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGAGTTGACCATATGGC	NA	NA	NA	NA	NA	NA	NA	NA	139808292	139833873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139808476_139816933_139817101_139820262_139820371_139827071_139827271_139833213_139833370_139833755
ENSMUSG00000031431.14_0	chrX	-	1955	3	FSM	ENSMUSG00000031431.14	ENSMUST00000055738.12	1974	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	139443926	139440285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_139441857_139442853_139442906_139443594
ENSMUSG00000031432.4_0	chrX	+	1298	7	FSM	ENSMUSG00000031432.4	ENST00000643795.2	1318	7	11	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAACTTACTGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	139357349	139376832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374628_139376479
ENSMUSG00000031432.4_3	chrX	+	1366	6	FSM	ENSMUSG00000031432.4	ENST00000372418.4	1385	6	13	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGTAATACATTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	139357364	139376392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139357613_139365979_139366164_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031432.4_4	chrX	+	1951	7	FSM	ENSMUSG00000031432.4	ENSMUST00000033809.4	1965	7	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTGGGTGTACTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	139357374	139376888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139357613_139365979_139366164_139368420_139368520_139369583_139369709_139372745_139372920_139374527_139374688_139375917
ENSMUSG00000031433.16_0	chrX	-	3722	8	FSM	ENSMUSG00000031433.16	ENSMUST00000113011.9	3728	8	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAACAAACAAAAAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	138899305	138844126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_138846653_138855655_138855804_138868944_138869349_138892264_138892337_138894046_138894252_138894660_138894854_138895860_138895978_138899248
ENSMUSG00000031433.16_1	chrX	-	3651	7	ISM	ENSMUSG00000031433.16	ENSMUST00000113011.9	3728	8	3343	5	3328	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAACAAACAAAAAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	138895963	138844126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_138846653_138855655_138855804_138868944_138869349_138892264_138892337_138894046_138894252_138894660_138894854_138895860
ENSMUSG00000031434.16_0	chrX	-	4376	16	FSM	ENSMUSG00000031434.16	ENSMUST00000033811.14	4412	16	26	10	26	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTTAAATTTCAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	138772377	138722390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_138724163_138724714_138725394_138735158_138735332_138736684_138736737_138737233_138737303_138738602_138738732_138741446_138741537_138750397_138750499_138752761_138752882_138755158_138755288_138755607_138755741_138758496_138758645_138759547_138759766_138765243_138765377_138771818_138771892_138772020
ENSMUSG00000031438.12_0	chrX	+	2727	7	FSM	ENSMUSG00000031438.12	ENSMUST00000113026.2	2750	7	13	10	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTGTATCTGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	138511381	138573884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_138512039_138543034_138543283_138559564_138559637_138564334_138564418_138565236_138565334_138566120_138566290_138572483
ENSMUSG00000031441.16_0	chr8	+	7523	30	FSM	ENSMUSG00000031441.16	ENSMUST00000033818.10	7549	30	16	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACGTCTCCCGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	12807029	12918718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12913758_12913863_12914919
ENSMUSG00000031441.16_4	chr8	+	7399	29	FSM	ENSMUSG00000031441.16	ENSMUST00000091237.12	7443	29	34	10	34	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACGTCTCCCGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	12807049	12918718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_12807353_12856649_12856773_12862311_12862402_12863074_12863156_12866907_12867016_12870389_12870519_12872612_12872717_12873001_12873053_12875679_12875745_12876324_12876407_12877447_12877599_12878448_12878647_12881084_12881259_12882508_12882679_12884636_12884709_12885160_12885235_12887911_12888016_12892825_12893008_12894403_12894656_12896040_12896219_12897472_12897576_12897739_12897886_12898802_12898863_12899774_12899903_12901036_12901173_12906933_12907000_12907882_12907987_12909313_12909480_12914919
ENSMUSG00000031442.22_0	chr8	+	5239	31	FSM	ENSMUSG00000031442.22	ENSMUST00000110876.9	5253	31	2	12	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCAGTAGCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	12965894	13070497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_12966055_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13063914_13064008_13064818_13064894_13067346_13067469_13068060_13068174_13068695
ENSMUSG00000031442.22_1	chr8	+	5093	29	FSM	ENSMUSG00000031442.22	ENSMUST00000110866.9	5108	29	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAAGACTCAGTAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	12999491	13070494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_12999677_13013163_13013248_13022978_13023094_13034859_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13067346_13067469_13068060_13068174_13068695
ENSMUSG00000031442.22_2	chr8	+	5302	29	FSM	ENSMUSG00000031442.22	ENSMUST00000145067.8	5313	29	3	8	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTCAGTAGCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	13034298	13070497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13034951_13043828_13043949_13046609_13046727_13047245_13047396_13048368_13048494_13049948_13050064_13050742_13050863_13051281_13051474_13051810_13052003_13052637_13052798_13053574_13053649_13053884_13053962_13055449_13055517_13056724_13056841_13057684_13057755_13059466_13059560_13059653_13059747_13060415_13060542_13061378_13061601_13061728_13061822_13062800_13062880_13062997_13063065_13063534_13063651_13063914_13064008_13064818_13064894_13067346_13067469_13068060_13068174_13068695_13068800_13068938
ENSMUSG00000031446.15_0	chr8	+	3716	20	FSM	ENSMUSG00000031446.15	ENSMUST00000016680.14	3728	20	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTACTTTACTAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	13155629	13197937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13155904_13156193_13156310_13165469_13165574_13171676_13171747_13172806_13172881_13173466_13173630_13173869_13173960_13174790_13174874_13177709_13177778_13183122_13183242_13183648_13183842_13185864_13185970_13186132_13186244_13186335_13186422_13186795_13186904_13190202_13190317_13192492_13192599_13192961_13193135_13194276_13194430_13196531
ENSMUSG00000031447.8_0	chr8	+	2219	9	FSM	ENSMUSG00000031447.8	ENSMUST00000033824.8	2229	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13896	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGTGTCCTTCTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	13209170	13225338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13209435_13215848_13215968_13217157_13217378_13217806_13217966_13221204_13221384_13222540_13222661_13223626_13223694_13223779_13223951_13224418
ENSMUSG00000031451.7_0	chr8	-	2541	15	FSM	ENSMUSG00000031451.7	ENSMUST00000033828.7	2548	15	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTGTGTTGGTCACTGT	NA	NA	NA	NA	NA	NA	NA	NA	13544485	13515375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13515901_13516626_13516856_13518191_13518365_13520218_13520388_13521448_13521614_13524656_13524847_13525038_13525158_13526111_13526234_13527043_13527167_13528251_13528375_13529006_13529130_13533673_13533737_13535670_13535696_13543845_13544013_13544260
ENSMUSG00000031453.17_0	chr8	-	4388	24	FSM	ENSMUSG00000031453.17	ENSMUST00000117551.4	4404	24	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGAGTTTGGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	13727595	13616955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13618767_13620238_13620423_13626336_13626441_13627359_13627569_13627806_13627890_13628607_13628715_13630033_13630108_13631250_13631329_13632298_13632377_13633749_13633857_13634912_13635037_13635673_13635749_13636873_13636989_13637951_13638101_13638863_13639021_13640201_13640307_13642003_13642081_13645334_13645408_13645808_13645890_13648213_13648291_13655861_13655957_13664533_13664638_13681774_13681893_13727392
ENSMUSG00000031458.9_0	chr8	-	774	4	FSM	ENSMUSG00000031458.9	ENSMUST00000033839.9	793	4	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAAATCACCTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	13940261	13934805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13935202_13935665_13935882_13937759_13937827_13940166
ENSMUSG00000031458.9_1	chr8	-	681	3	ISM	ENSMUSG00000031458.9	ENSMUST00000209371.2	601	4	2136	-190	2136	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAAAATCACCTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	13937828	13934805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_13935202_13935665_13935882_13937759
ENSMUSG00000031461.5_0	chr8	+	5059	37	FSM	ENSMUSG00000031461.5	ENSMUST00000033842.4	5075	37	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGGGGTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	15107659	15183532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_15107740_15113842_15113961_15115693_15115850_15119373_15119513_15119647_15119806_15120671_15120765_15127818_15127908_15127996_15128048_15130858_15131024_15131261_15131424_15133229_15133372_15134460_15134661_15135260_15135315_15148341_15148470_15149174_15149359_15152482_15152658_15154066_15154189_15156279_15156468_15158362_15158490_15158765_15158945_15160747_15160863_15161718_15161876_15161959_15162067_15163745_15163791_15164149_15164287_15167596_15167742_15167872_15167933_15169220_15169289_15172355_15172470_15172641_15172730_15173397_15173437_15175116_15175223_15178769_15178934_15179133_15179171_15180634_15180658_15181125_15181182_15182644
ENSMUSG00000031461.5_7	chr8	+	4980	36	ISM	ENSMUSG00000031461.5	ENSMUST00000033842.4	5075	37	6189	9	6189	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACCAGGGGTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	15113841	15183532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_15113961_15115693_15115850_15119373_15119513_15119647_15119806_15120671_15120765_15127818_15127908_15127996_15128048_15130858_15131024_15131261_15131424_15133229_15133372_15134460_15134661_15135260_15135315_15148341_15148470_15149174_15149359_15152482_15152658_15154066_15154189_15156279_15156468_15158362_15158490_15158765_15158945_15160747_15160863_15161718_15161876_15161959_15162067_15163745_15163791_15164149_15164287_15167596_15167742_15167872_15167933_15169220_15169289_15172355_15172470_15172641_15172730_15173397_15173437_15175116_15175223_15178769_15178934_15179133_15179171_15180634_15180658_15181125_15181182_15182644
ENSMUSG00000031465.7_0	chr8	-	3544	9	FSM	ENSMUSG00000031465.7	ENSMUST00000033846.7	3560	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACCAAAAAAAACAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	18791567	18740283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_18742225_18744412_18744544_18748059_18748227_18749083_18749186_18753494_18753626_18755666_18755900_18760534_18760657_18764096_18764253_18791006
ENSMUSG00000031467.11_0	chr8	+	10765	8	FSM	ENSMUSG00000031467.11	ENSMUST00000149565.8	10779	8	9	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTGGGTACTATGAT	NA	NA	NA	NA	NA	NA	NA	NA	18896301	18941372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_18896795_18911492_18911563_18918908_18919025_18920853_18920944_18926055_18926147_18928022_18928185_18929620_18929745_18931753
ENSMUSG00000031478.17_1	chr8	-	2035	16	FSM	ENSMUSG00000031478.17	ENSMUST00000110730.10	2050	16	6	9	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATAACCGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	22656445	22618307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ENSMUSG00000031478.17_2	chr8	-	2012	16	FSM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	0	9	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATAACCGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	22656428	22618307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339_22652511_22656393
ENSMUSG00000031478.17_3	chr8	-	1983	15	ISM	ENSMUSG00000031478.17	ENSMUST00000033865.16	2021	16	3917	4	-1	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAACCGTGTGTGCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	22652511	22618302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622210_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339
ENSMUSG00000031478.17_5	chr8	-	1983	15	FSM	ENSMUSG00000031478.17	ENSMUST00000178324.2	1989	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATAACCGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	22652510	22618307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22618807_22619360_22619485_22621221_22621354_22622065_22622216_22623008_22623112_22632905_22632956_22636946_22637020_22638498_22638700_22639876_22639932_22646991_22647079_22647165_22647234_22648642_22648727_22650207_22650306_22650385_22650474_22652339
ENSMUSG00000031479.10_0	chr8	+	3552	14	FSM	ENSMUSG00000031479.10	ENSMUST00000033866.9	3574	14	12	10	12	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGCCAATGTGGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	22682836	22710849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22682983_22688913_22688983_22692289_22692361_22695682_22695798_22696792_22696883_22697872_22697960_22700284_22700318_22700404_22700483_22701553_22701689_22703510_22703577_22706527_22706593_22707140_22707226_22708227_22708305_22708414
ENSMUSG00000031481.9_0	chr8	+	764	10	FSM	ENSMUSG00000031481.9	ENST00000445572.5	773	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTATGGTGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22835024	22861206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22835066_22835834_22835917_22836036_22836126_22839341_22839404_22841458_22841540_22845486_22845588_22849410_22849503_22855929_22856023_22859526_22859598_22861154
ENSMUSG00000031481.9_2	chr8	+	712	9	ISM	ENSMUSG00000031481.9	ENST00000445572.5	773	10	821	9	821	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTATGGTGAAAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	22835845	22861206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_22835917_22836036_22836126_22839341_22839404_22841458_22841540_22845486_22845588_22849410_22849503_22855929_22856023_22859526_22859598_22861154
ENSMUSG00000031482.10_0	chr8	-	3421	7	FSM	ENSMUSG00000031482.10	ENSMUST00000033871.8	3430	7	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACTTGCTCTGGTCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	22888607	22865569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22867998_22869299_22869459_22870853_22871024_22873222_22873361_22879829_22880089_22885728_22885844_22888455
ENSMUSG00000031483.9_0	chr8	+	4822	12	FSM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTTTTCATTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27513842	27530356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_27513935_27515084_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUSG00000031483.9_2	chr8	+	4731	11	ISM	ENSMUSG00000031483.9	ENSMUST00000033873.9	4838	12	1257	0	1257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTTTTCATTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	27515083	27530356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_27515207_27517196_27517279_27518926_27518974_27519366_27519429_27519571_27519698_27521725_27521800_27521954_27522014_27522261_27522354_27523413_27523504_27526041_27526122_27526460
ENSMUSG00000031485.16_0	chr8	+	3592	8	FSM	ENSMUSG00000031485.16	ENSMUST00000033875.10	3603	8	10	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTATGCGTGTGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	27532592	27546159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_27532742_27535055_27535164_27535425_27535462_27535951_27536028_27539201_27539337_27541286_27541430_27542263_27542363_27543313
ENSMUSG00000031486.16_0	chr8	+	5751	19	FSM	ENSMUSG00000031486.16	ENSMUST00000033876.14	5760	19	2	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGACAGCTGTCGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	27575627	27613457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_27576240_27588813_27588886_27599355_27599428_27599728_27599801_27599968_27600041_27600462_27600627_27601079_27601294_27602370_27602536_27603313_27603513_27604107_27604258_27604372_27604535_27605264_27605490_27605682_27605903_27607343_27607544_27608751_27608880_27609161_27609286_27609733_27609880_27610474_27610565_27610793
ENSMUSG00000031487.6_0	chr8	-	1890	4	FSM	ENSMUSG00000031487.6	ENSMUST00000033877.6	1899	4	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATAAAACCAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	27618704	27613396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_27614649_27615847_27616170_27617487_27617548_27618448
ENSMUSG00000031488.15_0	chr8	-	7930	6	FSM	ENSMUSG00000031488.15	ENSMUST00000054212.7	7965	6	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAAGGTTTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	27664646	27628807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_27633423_27640722_27640832_27641624_27643188_27644173_27644964_27646254_27646698_27664236
ENSMUSG00000031490.7_0	chr8	+	1980	3	FSM	ENSMUSG00000031490.7	ENSMUST00000033880.7	1997	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCATAGGATTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	27750367	27766696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_27750579_27763350_27763531_27765107
ENSMUSG00000031497.11_0	chr8	+	1010	5	FSM	ENSMUSG00000031497.11	ENST00000430559.5	1017	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCACTTGCTGGAGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	10056610	10085439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_10057161_10057249_10057335_10081309_10081423_10081505_10081657_10085328
ENSMUSG00000031497.11_1	chr8	+	4760	7	FSM	ENSMUSG00000031497.11	ENSMUST00000207792.3	4771	7	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGCCAAAGAAAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	10056637	10089066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_10057161_10057249_10057335_10064168_10064262_10071372_10071430_10081309_10081423_10081505_10081657_10085328
ENSMUSG00000031502.12_0	chr8	-	6596	52	FSM	ENSMUSG00000031502.12	ENSMUST00000033898.10	6615	52	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTAGATCATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	11362815	11248430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11249883_11251657_11251831_11252893_11253009_11256225_11256404_11257193_11257407_11258232_11258332_11259521_11259651_11260759_11260832_11261763_11261837_11262601_11262736_11263503_11263690_11264651_11264703_11266700_11266800_11267264_11267346_11267433_11267561_11267912_11268053_11268680_11268771_11268868_11268968_11269079_11269233_11269986_11270077_11270208_11270377_11270981_11271096_11271288_11271440_11272195_11272294_11272998_11273104_11273575_11273669_11276324_11276494_11276949_11277142_11281397_11281469_11281946_11282031_11283827_11283924_11285094_11285260_11286051_11286088_11286425_11286511_11287844_11287887_11288997_11289052_11289133_11289179_11289826_11289878_11290040_11290068_11291121_11291209_11292172_11292215_11292781_11292818_11294340_11294404_11294485_11294570_11295057_11295085_11295210_11295265_11295736_11295800_11295892_11295938_11296862_11296908_11297005_11297096_11317596_11317657_11362515
ENSMUSG00000031503.14_0	chr8	+	6435	48	FSM	ENSMUSG00000031503.14	ENSMUST00000033899.14	6450	48	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACTATGTTTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	11362813	11499281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11363115_11363418_11363508_11363629_11363685_11404276_11404358_11448661_11448797_11449703_11449749_11451147_11451265_11452162_11452235_11452983_11453020_11453341_11453405_11454963_11455000_11456812_11456855_11458051_11458145_11458881_11458918_11459421_11459473_11460054_11460100_11463978_11464033_11464741_11464809_11465363_11465475_11465925_11466076_11470576_11470670_11471167_11471323_11473551_11473625_11473716_11473824_11475338_11475541_11475928_11475989_11477006_11477064_11477552_11477661_11479306_11479529_11481239_11481402_11483653_11483825_11484627_11484772_11487586_11487710_11487923_11488106_11488353_11488418_11488554_11488630_11488946_11489055_11489305_11489414_11490378_11490451_11491221_11491348_11491879_11491997_11493070_11493233_11493316_11493416_11493555_11493703_11493830_11493948_11494930_11495123_11495959_11496247_11498058
ENSMUSG00000031504.7_0	chr8	-	1387	2	FSM	ENSMUSG00000031504.7	ENSMUST00000033900.7	1392	2	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTTGTTCTTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	11528709	11503521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11504527_11528327
ENSMUSG00000031505.12_0	chr8	+	1287	10	FSM	ENSMUSG00000031505.12	ENSMUST00000177955.8	1307	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGGAAATTTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11547515	11563277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11547627_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031505.12_5	chr8	+	1336	10	FSM	ENSMUSG00000031505.12	ENSMUST00000033901.11	1359	10	13	10	-3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGGAAATTTGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	11547580	11563277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11547741_11552621_11552773_11554884_11554931_11555430_11555520_11556706_11556816_11559321_11559373_11559452_11559558_11560226_11560348_11561876_11561998_11562894
ENSMUSG00000031508.15_0	chr8	-	5140	5	FSM	ENSMUSG00000031508.15	ENSMUST00000169782.3	5156	5	10	6	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGATCTGTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	11685747	11661588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_1	chr8	-	2267	6	FSM	ENSMUSG00000031508.15	ENSMUST00000033905.13	2285	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTGATCTGTCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	11685741	11661588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11662948_11665814_11665911_11669061_11669298_11678438_11678531_11682865_11683019_11685410
ENSMUSG00000031508.15_4	chr8	-	741	4	FSM	ENSMUSG00000031508.15	ENST00000310847.8	758	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGATCTGTGGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	11685602	11669063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11669364_11678434_11678531_11682865_11683019_11685410
ENSMUSG00000031511.17_0	chr8	+	3043	19	FSM	ENSMUSG00000031511.17	ENST00000375741.6	3068	19	25	0	-20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTTTAATATATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	11778008	11875105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11778417_11808430_11808518_11831089_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11874504
ENSMUSG00000031511.17_10	chr8	+	4421	20	FSM	ENSMUSG00000031511.17	ENSMUST00000074856.13	4451	20	19	11	19	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCACAAAACGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	11808372	11885208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11881492_11881593_11881894_11881950_11882969
ENSMUSG00000031511.17_11	chr8	+	4616	21	FSM	ENSMUSG00000031511.17	ENSMUST00000098938.9	4628	21	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAACGTGTTGCTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	11808359	11885213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11874504_11874682_11881492_11881593_11881894_11881950_11882969
ENSMUSG00000031511.17_4	chr8	+	2787	22	FSM	ENSMUSG00000031511.17	ENST00000646102.2	2811	22	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATAGGCTGACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	11778044	11883083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11778417_11808430_11808518_11831154_11831240_11832524_11832656_11835712_11835915_11841455_11841545_11850459_11850555_11850772_11850869_11855200_11855324_11858715_11858855_11859516_11859577_11860250_11860398_11862596_11862684_11864942_11865022_11865160_11865301_11867659_11867885_11869637_11869732_11871959_11872050_11874504_11874682_11881492_11881593_11881894_11881950_11882969
ENSMUSG00000031513.9_0	chr8	-	2861	4	FSM	ENSMUSG00000031513.9	ENSMUST00000033910.9	2879	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCATTTTAGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34614178	34602734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34604993_34606007_34606195_34607914_34607991_34613838
ENSMUSG00000031513.9_1	chr8	-	530	3	FSM	ENSMUSG00000031513.9	ENST00000518001.1	538	3	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGTTCGCCTCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34613942	34604753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34604993_34606007_34606195_34613838
ENSMUSG00000031516.12_0	chr8	-	1241	7	FSM	ENSMUSG00000031516.12	ENSMUST00000033913.11	1249	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAGCTGCCTCAATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34575942	34557576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34557997_34559664_34559808_34560782_34560831_34562037_34562127_34564342_34564449_34573495_34573561_34575572
ENSMUSG00000031519.5_0	chr8	+	1570	7	FSM	ENSMUSG00000031519.5	ENSMUST00000033918.4	1585	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2744	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCTATTGTAATAATTA	NA	NA	NA	NA	NA	NA	NA	NA	55003374	55040871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_55003676_55033860_55033941_55036585_55036694_55037693_55037845_55038013_55038149_55038805_55038998_55040268
ENSMUSG00000031520.7_0	chr8	+	2415	7	FSM	ENSMUSG00000031520.7	ENSMUST00000033919.6	2449	7	24	10	24	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCCAAATATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54530664	54640121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_54530961_54609992_54610195_54612327_54612519_54622059_54622212_54633736_54633844_54634121_54634456_54638988
ENSMUSG00000031521.6_1	chr8	+	1161	9	FSM	ENSMUSG00000031521.6	ENSMUST00000033920.6	1181	9	12	8	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGCTTACTGACATTA	NA	NA	NA	NA	NA	NA	NA	NA	53964773	53976365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_53964967_53966576_53966731_53967271_53967385_53968978_53969092_53970788_53970904_53971950_53972027_53973271_53973380_53974084_53974219_53976210
ENSMUSG00000031523.17_0	chr8	-	6150	14	FSM	ENSMUSG00000031523.17	ENSMUST00000033923.14	6159	14	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAAAGAACACTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	37081092	37034908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37080712
ENSMUSG00000031523.17_1	chr8	-	6241	14	FSM	ENSMUSG00000031523.17	ENSMUST00000098826.10	6241	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACACTGATTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	37200208	37034904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_37037558_37038418_37038593_37039821_37040040_37041108_37041328_37041960_37042076_37044188_37044403_37046377_37046577_37046700_37046861_37049854_37050032_37050694_37052122_37053829_37053894_37060530_37060613_37066522_37066595_37199741
ENSMUSG00000031527.8_0	chr8	-	5057	7	FSM	ENSMUSG00000031527.8	ENSMUST00000033927.8	5079	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCAATGTTTTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	35962673	35932414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_35936525_35941550_35941666_35943612_35943723_35945713_35945798_35949669_35949881_35958354_35958534_35962425
ENSMUSG00000031529.6_0	chr8	-	9153	27	FSM	ENSMUSG00000031529.6	ENSMUST00000033929.6	9163	27	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACACTGTGTGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	35432840	35293619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_35298876_35301591_35301749_35305537_35305725_35306041_35306148_35307121_35307197_35308906_35309005_35310068_35310190_35314434_35314518_35315735_35315974_35316306_35316496_35318251_35318362_35318767_35318988_35320377_35320544_35323081_35323228_35324607_35324688_35328668_35328841_35334434_35334514_35334847_35334940_35336625_35336748_35340181_35340369_35340756_35340824_35342367_35342463_35356829_35356906_35357657_35357695_35385532_35385629_35407849_35408075_35432167
ENSMUSG00000031530.7_0	chr8	+	2727	4	FSM	ENSMUSG00000031530.7	ENSMUST00000033930.5	2740	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGGCCTCCTAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	35274463	35287048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_35275328_35283600_35283747_35284277_35284498_35285551
ENSMUSG00000031532.8_0	chr8	+	1871	6	FSM	ENSMUSG00000031532.8	ENSMUST00000033933.8	1860	6	6	-17	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTGAAGCGTGTTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	34621735	34637992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34621991_34628348_34628528_34632294_34632695_34634872_34635012_34635610_34635766_34637249
ENSMUSG00000031533.5_0	chr8	+	1497	7	FSM	ENSMUSG00000031533.5	ENSMUST00000033934.5	1515	7	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATCAAAATCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22901385	22919672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22901601_22904731_22905020_22909742_22909902_22911325_22911467_22914362_22914437_22917763_22917908_22919196
ENSMUSG00000031534.16_0	chr8	-	1383	4	FSM	ENSMUSG00000031534.16	ENSMUST00000033935.16	1402	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCCAGCTGCCTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22966886	22952637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22953392_22961464_22961590_22963457_22963597_22966521
ENSMUSG00000031536.7_0	chr8	-	1183	14	FSM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAGAATATTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	23143427	23118152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075_23143134_23143329
ENSMUSG00000031536.7_1	chr8	-	1086	13	ISM	ENSMUSG00000031536.7	ENSMUST00000033938.7	1201	14	300	11	300	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAGAATATTGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	23143134	23118152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_23118386_23120358_23120499_23121470_23121536_23127083_23127171_23129949_23130021_23130374_23130448_23130528_23130584_23132320_23132373_23135060_23135111_23137428_23137488_23138197_23138273_23140504_23140572_23143075
ENSMUSG00000031537.16_0	chr8	-	3566	22	FSM	ENSMUSG00000031537.16	ENSMUST00000033939.13	3580	22	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCACCCATGAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	23196587	23149234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23150476_23151417_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ENSMUSG00000031537.16_5	chr8	-	3977	21	FSM	ENSMUSG00000031537.16	ENSMUST00000063401.10	3977	21	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAACTACTACCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	23196605	23149783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23151509_23153705_23153834_23155504_23155653_23155827_23155928_23156006_23156057_23157239_23157350_23158699_23158762_23158960_23159113_23159622_23159747_23161646_23161762_23162338_23162534_23163378_23163509_23164978_23165087_23168805_23168931_23171678_23171769_23172741_23172831_23181073_23181144_23183830_23183949_23185178_23185274_23196097_23196221_23196485
ENSMUSG00000031538.7_0	chr8	+	2515	14	FSM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTCCACTGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	23247765	23272853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23247845_23257095_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUSG00000031538.7_3	chr8	+	2432	13	ISM	ENSMUSG00000031538.7	ENSMUST00000033941.7	2525	14	9337	7	-4614	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTTTCCACTGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	23257099	23272853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_23257184_23258461_23258505_23261709_23261848_23262221_23262333_23262651_23262827_23263632_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUSG00000031538.7_4	chr8	+	1339	10	FSM	ENSMUSG00000031538.7	ENST00000519510.5	1372	10	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACATGAAGCAATGACAA	NA	NA	NA	NA	NA	NA	NA	NA	23261738	23272105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23261848_23262221_23262333_23263646_23263725_23265580_23265756_23266806_23266893_23268118_23268315_23268428_23268566_23268670_23268812_23270441_23270606_23271963
ENSMUSG00000031539.7_0	chr8	-	3406	9	FSM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23295609	23277369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295529
ENSMUSG00000031539.7_1	chr8	-	3315	8	ISM	ENSMUSG00000031539.7	ENSMUST00000163739.3	3417	9	1513	0	1513	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23294107	23277369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775
ENSMUSG00000031539.7_2	chr8	-	3373	9	FSM	ENSMUSG00000031539.7	ENSMUST00000210656.2	3373	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTCTGGTTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23295638	23277369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23279470_23280896_23281042_23281260_23281469_23282733_23282868_23283081_23283168_23287097_23287236_23289656_23289829_23293775_23294119_23295591
ENSMUSG00000031540.15_0	chr8	+	9038	17	FSM	ENSMUSG00000031540.15	ENSMUST00000110696.8	9041	17	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTCTTGCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	23349552	23433274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23349649_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ENSMUSG00000031540.15_1	chr8	+	7586	18	FSM	ENSMUSG00000031540.15	ENST00000396930.4	7591	18	5	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATCTTATCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	23349563	23431714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23349649_23351532_23351658_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420389_23422130_23422731_23425495_23425815_23428004
ENSMUSG00000031540.15_5	chr8	+	9104	18	FSM	ENSMUSG00000031540.15	ENSMUST00000044331.7	9113	18	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGATGTCTGTCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	23349567	23433269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23349649_23351532_23351619_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420395_23422130_23422731_23425495_23425815_23428004
ENSMUSG00000031540.15_9	chr8	+	7504	17	ISM	ENSMUSG00000031540.15	ENST00000396930.4	7591	18	1971	0	1965	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATCTTATCCAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	23351529	23431714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_23351658_23351903_23352818_23393123_23393233_23397661_23397778_23398258_23398341_23400147_23400284_23401675_23401993_23404284_23404404_23409340_23409457_23413530_23413673_23415296_23415459_23416392_23416487_23419231_23419464_23420180_23420389_23422130_23422731_23425495_23425815_23428004
ENSMUSG00000031543.19_0	chr8	+	8211	44	FSM	ENSMUSG00000031543.19	ENSMUST00000121802.9	8218	44	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATGGCACTGGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	23464897	23640503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23465278_23554967_23555070_23572208_23572308_23574734_23574834_23575594_23575694_23576934_23577121_23577975_23578075_23578575_23578675_23578950_23579050_23583819_23584018_23585227_23585327_23586113_23586213_23586763_23586863_23587861_23588060_23588936_23589036_23589613_23589713_23594805_23595004_23596047_23596147_23597897_23597997_23598191_23598291_23599263_23599357_23599672_23599746_23600362_23600387_23601375_23601473_23601825_23601905_23603779_23603878_23603961_23604187_23604796_23604952_23605371_23605584_23606059_23606265_23606572_23606670_23606852_23607082_23609077_23609204_23609329_23609450_23610550_23610630_23610915_23610991_23612784_23612917_23613847_23613995_23622112_23622651_23625573_23625851_23630160_23630245_23631179_23631246_23631611_23631737_23638296
ENSMUSG00000031543.19_1	chr8	+	6783	43	FSM	ENSMUSG00000031543.19	ENSMUST00000117296.8	6794	43	0	11	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAACCAATAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	23525143	23639286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23525262_23554967_23555070_23572208_23572308_23574734_23574834_23575594_23575694_23576934_23577121_23577975_23578075_23578575_23578675_23578950_23579050_23583819_23584018_23585227_23585327_23586113_23586213_23586763_23586863_23587861_23588060_23588936_23589036_23589613_23589713_23594805_23595004_23596047_23596147_23597897_23597997_23598191_23598291_23599263_23599357_23599672_23599746_23601375_23601473_23601825_23601905_23603779_23603878_23603961_23604187_23604796_23604952_23605371_23605584_23606059_23606265_23606572_23606670_23606852_23607082_23609077_23609204_23609329_23609450_23610550_23610630_23610915_23610991_23612784_23612917_23613847_23613995_23622112_23622651_23625573_23625851_23630160_23630245_23631179_23631321_23631611_23631737_23638296
ENSMUSG00000031543.19_10	chr8	+	1027	4	FSM	ENSMUSG00000031543.19	ENSMUST00000033947.15	1030	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAGGAAACCGGGAACGG	NA	NA	NA	NA	NA	NA	NA	NA	23629120	23638707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23629512_23630160_23630245_23631179_23631321_23638296
ENSMUSG00000031543.19_3	chr8	+	8124	45	FSM	ENSMUSG00000031543.19	ENSMUST00000084038.11	8147	45	16	7	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCACTGGTCTCCATCG	NA	NA	NA	NA	NA	NA	NA	NA	23548306	23640506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23548687_23554967_23555070_23572208_23572308_23574734_23574834_23575594_23575694_23576934_23577121_23577975_23578075_23578575_23578675_23578950_23579050_23583819_23584018_23585227_23585327_23586113_23586213_23586763_23586863_23587861_23588060_23588936_23589036_23589613_23589713_23594805_23595004_23596047_23596147_23597897_23597997_23598191_23598291_23599263_23599357_23599672_23599746_23600362_23600387_23601375_23601473_23601825_23601905_23603779_23603878_23603961_23604187_23604796_23604952_23605371_23605584_23606059_23606265_23606572_23606670_23606852_23607082_23609077_23609204_23609329_23609450_23610550_23610630_23610915_23610991_23612784_23612917_23613847_23613995_23622112_23622488_23622577_23622651_23625573_23625851_23630160_23630245_23631179_23631246_23631611_23631737_23638296
ENSMUSG00000031543.19_7	chr8	+	6540	41	ISM	ENSMUSG00000031543.19	ENSMUST00000141784.9	6566	42	29721	11	6427	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAACCAATAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	23554967	23639286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_23555070_23572208_23572308_23574734_23574834_23575594_23575694_23576934_23577121_23577975_23578075_23578575_23578675_23578950_23579050_23583819_23584018_23585227_23585327_23586113_23586213_23586763_23586863_23587861_23588060_23588936_23589036_23589613_23589713_23594805_23595004_23596047_23596147_23597897_23597997_23598191_23598291_23599263_23599357_23599672_23599746_23601375_23601473_23601825_23601905_23603779_23603878_23603961_23604187_23604796_23604952_23605371_23605584_23606059_23606265_23606572_23606670_23606852_23607082_23609077_23609204_23609329_23609450_23610550_23610630_23610915_23610991_23612784_23612917_23613847_23613995_23622112_23622651_23625573_23625851_23630160_23630245_23631179_23631321_23638296
ENSMUSG00000031543.19_9	chr8	+	1726	5	FSM	ENSMUSG00000031543.19	ENSMUST00000121075.8	1740	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAACCAATAGAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	23629050	23639286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23629512_23630160_23630245_23631179_23631246_23631611_23631737_23638296
ENSMUSG00000031545.7_0	chr8	-	5452	12	ISM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	16662	10	-7113	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTAGCTCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	23681700	23661290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731
ENSMUSG00000031545.7_1	chr8	-	5508	13	FSM	ENSMUSG00000031545.7	ENSMUST00000167004.3	5518	13	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTGTAGCTCTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	23698362	23661290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670743_23670875_23670966_23671788_23671864_23672678_23672980_23674544_23674615_23680731_23681709_23698314
ENSMUSG00000031545.7_10	chr8	-	956	8	NIC	ENSMUSG00000031545.7	novel	1016	9	NA	NA	1617	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGACCGCAGCCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	23672970	23664590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670728_23672646
ENSMUSG00000031545.7_9	chr8	-	1008	9	NIC	ENSMUSG00000031545.7	novel	1016	9	NA	NA	0	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGACCGCAGCCGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	23674587	23664590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_23664677_23665355_23665436_23665523_23665653_23669430_23669517_23669784_23669841_23670116_23670233_23670648_23670728_23672646_23672980_23674544
ENSMUSG00000031546.7_0	chr8	-	1324	8	FSM	ENSMUSG00000031546.7	ENSMUST00000033950.7	1349	8	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTTAAAAACAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23727665	23716646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_23717192_23717264_23717356_23719431_23719521_23719621_23719720_23722620_23722735_23724769_23724857_23726995_23727116_23727485
ENSMUSG00000031548.8_0	chr8	+	4344	3	FSM	ENSMUSG00000031548.8	ENSMUST00000033952.8	4372	3	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAACAGCGTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	23901537	23939640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_23902345_23907345_23907424_23936181
ENSMUSG00000031553.17_0	chr8	-	2728	22	FSM	ENSMUSG00000031553.17	ENSMUST00000033958.15	2743	22	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGCATATTTGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	25215861	25167248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25167408_25170722_25170771_25171397_25171623_25174556_25174750_25177897_25178013_25179416_25179504_25184186_25184371_25184635_25184724_25185156_25185353_25187145_25187245_25193765_25193956_25197374_25197512_25200233_25200316_25201315_25201483_25201692_25201765_25204209_25204276_25204952_25205131_25205541_25205619_25209430_25209510_25213501_25213558_25215294_25215378_25215714
ENSMUSG00000031554.19_0	chr8	-	2242	19	FSM	ENSMUSG00000031554.19	ENSMUST00000209935.2	2272	19	20	10	20	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCATTTATGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25314062	25223009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25223174_25236672_25236788_25237497_25237585_25271581_25271799_25272546_25272638_25276149_25276346_25281950_25282047_25294373_25294561_25296408_25296543_25300016_25300099_25300706_25300865_25301065_25301138_25302400_25302467_25303400_25303579_25305105_25305183_25305466_25305546_25308111_25308168_25308738_25308819_25313955
ENSMUSG00000031555.16_0	chr8	-	3966	22	FSM	ENSMUSG00000031555.16	ENSMUST00000084035.12	3985	22	11	8	11	-8	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTTGTTTTGTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25506927	25439634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25441027_25445947_25446016_25452929_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUSG00000031555.16_11	chr8	-	4022	22	FSM	ENSMUSG00000031555.16	ENSMUST00000208247.3	4044	22	14	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCTTGTTTTGTCGTCC	NA	NA	NA	NA	NA	NA	NA	NA	25506929	25439634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25441027_25445947_25446016_25452875_25453105_25454918_25455052_25456664_25456771_25457164_25457246_25460601_25460786_25463044_25463151_25468443_25468640_25469438_25469532_25471966_25472139_25480282_25480417_25481266_25481349_25482089_25482260_25483059_25483132_25485125_25485192_25486670_25486867_25487758_25487836_25493273_25493353_25494794_25494854_25496192_25496291_25506700
ENSMUSG00000031556.7_0	chr8	+	1264	4	FSM	ENSMUSG00000031556.7	ENSMUST00000033961.7	1281	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTAGCCTGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25507235	25513268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_25507609_25508081_25508170_25510454_25510571_25512581
ENSMUSG00000031557.17_0	chr8	-	5156	12	FSM	ENSMUSG00000031557.17	ENSMUST00000064883.14	5176	12	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGAAATCTGGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25592382	25529169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25592049
ENSMUSG00000031557.17_4	chr8	-	3441	12	FSM	ENSMUSG00000031557.17	ENSMUST00000128715.8	3463	12	7	15	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	25591994	25530870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25533055_25533640_25533719_25542375_25542440_25547309_25547381_25547748_25547818_25549149_25549297_25549849_25549991_25552390_25552489_25553953_25554003_25562014_25562072_25578357_25578522_25591675
ENSMUSG00000031558.16_0	chr5	+	9928	36	FSM	ENSMUSG00000031558.16	ENSMUST00000173107.8	9960	36	16	16	0	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAATGCCCTCACAATA	NA	NA	NA	NA	NA	NA	NA	NA	48140495	48465059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031558.16_2	chr5	+	7992	37	FSM	ENSMUSG00000031558.16	ENST00000504154.6	8008	37	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACGGTTTGGCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	48140509	48463113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_48142561_48145180_48145253_48146461_48146534_48157650_48157723_48327496_48327569_48339587_48339660_48343837_48343910_48346770_48346935_48349534_48349674_48368097_48368170_48368624_48368697_48374793_48374866_48377003_48377148_48377258_48377423_48378308_48378333_48381994_48382146_48387601_48387677_48389253_48389398_48392679_48392824_48394597_48394765_48395717_48395851_48399890_48399960_48401969_48402042_48402918_48402991_48404491_48404564_48407119_48407284_48414098_48414224_48414347_48414446_48416885_48417026_48432923_48433018_48439058_48439197_48439286_48439528_48440729_48440861_48453750_48453906_48459607_48459897_48460094_48460307_48461341
ENSMUSG00000031561.17_0	chr8	-	8391	27	ISM	ENSMUSG00000031561.17	ENSMUST00000033965.14	8961	29	257444	11	138067	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	48870281	48680727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740167_48740189_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48766272_48766300_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042
ENSMUSG00000031561.17_2	chr8	-	8110	25	ISM	ENSMUSG00000031561.17	ENSMUST00000190840.8	8663	27	257438	0	138067	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGGATTTAATAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	48870281	48680960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042
ENSMUSG00000031561.17_3	chr8	-	2234	10	FSM	ENSMUSG00000031561.17	ENSMUST00000110346.9	2267	10	30	3	30	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGCATTTTGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	49008318	48788230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870281_49008187
ENSMUSG00000031561.17_5	chr8	-	8897	29	NNC	ENSMUSG00000031561.17	novel	8961	29	NA	NA	48	-11	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49127671	48680727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740167_48740189_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48766272_48766300_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870282_49099292_49099572_49127444
ENSMUSG00000031561.17_9	chr8	-	8589	27	NNC	ENSMUSG00000031561.17	novel	8663	27	NA	NA	75	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGGGGATTTAATAATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	49127644	48680960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_48682237_48685042_48685174_48688324_48689937_48693279_48693577_48707444_48707681_48709866_48710043_48729064_48729940_48730701_48730857_48731992_48732226_48740825_48741076_48745153_48745298_48746541_48746810_48751820_48752083_48752628_48752749_48753789_48754007_48763657_48763805_48788623_48788810_48793988_48794190_48795291_48795487_48795649_48795752_48796266_48796478_48802233_48802449_48820345_48820469_48848470_48848710_48870042_48870282_49099292_49099572_49127444
ENSMUSG00000031562.16_0	chr8	+	2080	6	FSM	ENSMUSG00000031562.16	ENSMUST00000170263.9	2096	6	8	8	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCAAGACGTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	48563000	48594692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_48563284_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUSG00000031562.16_1	chr8	+	2062	6	FSM	ENSMUSG00000031562.16	ENSMUST00000033966.13	2072	6	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCAAGACGTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	48563051	48594692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_48563317_48564693_48564826_48565002_48565139_48590292_48590410_48591816_48591914_48593377
ENSMUSG00000031563.9_0	chr8	-	8662	23	FSM	ENSMUSG00000031563.9	ENSMUST00000057561.9	8678	23	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAACAGAAATCCCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	48443578	48277001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321206_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ENSMUSG00000031563.9_6	chr8	-	3667	23	FSM	ENSMUSG00000031563.9	ENST00000513834.5	3679	23	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAATCTGGTCCACAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	48443219	48281490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48281820_48284646_48284775_48295899_48296143_48299181_48299275_48300428_48300594_48302340_48302525_48304939_48305062_48309218_48309384_48311764_48311958_48316887_48316975_48317086_48317168_48317539_48317670_48321353_48321827_48322813_48322904_48328263_48328507_48331862_48331937_48333135_48333283_48336528_48336659_48340106_48340187_48352470_48352548_48353687_48353892_48373623_48373734_48443100
ENSMUSG00000031565.19_0	chr8	+	5019	18	FSM	ENSMUSG00000031565.19	ENSMUST00000084027.13	5025	18	5	1	5	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCTACTTGACTCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	26008779	26065733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUSG00000031565.19_1	chr8	+	4048	18	FSM	ENSMUSG00000031565.19	ENST00000532791.5	4064	18	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGAGCAGGTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	26008831	26064820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUSG00000031565.19_16	chr8	+	3782	17	FSM	ENSMUSG00000031565.19	ENSMUST00000119398.10	3789	17	7	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCATTTTTATCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	26008811	26064795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26047746_26047837_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUSG00000031565.19_24	chr8	+	4035	18	FSM	ENSMUSG00000031565.19	ENST00000683815.1	4041	18	6	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTATCCTGGGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26008817	26064799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUSG00000031565.19_46	chr8	+	2948	17	FSM	ENSMUSG00000031565.19	ENST00000341462.9	2966	17	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTAGGGCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	26008859	26063661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26045523_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056924_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561
ENSMUSG00000031565.19_9	chr8	+	5038	18	FSM	ENSMUSG00000031565.19	ENSMUST00000179592.8	5041	18	3	0	3	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTCTACTTGACTCAC	NA	NA	NA	NA	NA	NA	NA	NA	26008790	26065730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26009446_26022265_26022445_26045484_26045791_26047746_26047831_26048086_26048260_26050735_26050860_26052153_26052345_26054355_26054501_26056726_26056930_26058203_26058350_26059654_26059777_26060156_26060268_26060725_26060917_26062353_26062477_26062734_26062806_26063138_26063277_26063561_26063668_26063760
ENSMUSG00000031568.17_0	chr8	+	2906	7	NIC	ENSMUSG00000031568.17	novel	2921	8	NA	NA	5	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGATTTTTTTCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	47986703	48005853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_47986979_47990313_47990395_47995726_47995837_47995916_47996065_47997145_47997264_48000823_48000874_48003729
ENSMUSG00000031570.18_0	chr8	+	1470	7	FSM	ENSMUSG00000031570.18	ENSMUST00000068916.16	1483	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATACTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26210072	26214910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26214106
ENSMUSG00000031570.18_2	chr8	+	1524	8	FSM	ENSMUSG00000031570.18	ENSMUST00000139836.8	1539	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATACTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26210101	26214910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26210179_26210293_26210403_26210581_26210673_26211200_26211265_26211688_26211814_26212456_26212628_26213057_26213141_26214106
ENSMUSG00000031574.9_0	chr8	+	4042	7	FSM	ENSMUSG00000031574.9	ENSMUST00000033979.6	4046	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAACATTGGGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	26298501	26306006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26298661_26299483_26299595_26299834_26299963_26300972_26301132_26301240_26301426_26301817_26301912_26302800
ENSMUSG00000031575.19_1	chr8	-	3284	16	FSM	ENSMUSG00000031575.19	ENSMUST00000068892.15	3307	16	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAGAAAGAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	26330808	26306039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318888_26321300_26321377_26322667_26322764_26323778_26323875_26324987_26325083_26326027_26326117_26329770_26329917_26330039_26330104_26330609
ENSMUSG00000031575.19_27	chr8	-	1283	11	FSM	ENSMUSG00000031575.19	ENST00000453999.1	1291	11	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTAACCAGTCCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	26323863	26307436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26307537_26307631_26307692_26308573_26308673_26309653_26309747_26312722_26312917_26313166_26313335_26317201_26317420_26318793_26318876_26321288_26321377_26322667_26322764_26323778
ENSMUSG00000031575.19_38	chr8	-	667	7	FSM	ENSMUSG00000031575.19	ENST00000438037.1	675	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTGCACGGTACGTAC	NA	NA	NA	NA	NA	NA	NA	NA	26329814	26308585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26308673_26309653_26309747_26312722_26312885_26323774_26323875_26324987_26325083_26326027_26326117_26329773
ENSMUSG00000031575.19_39	chr8	-	615	6	ISM	ENSMUSG00000031575.19	ENST00000438037.1	675	7	3709	8	-2236	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCTGCACGGTACGTAC	NA	NA	NA	NA	NA	NA	NA	NA	26326105	26308585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_26308673_26309653_26309747_26312722_26312885_26323774_26323875_26324987_26325083_26326027
ENSMUSG00000031577.11_0	chr8	+	3122	7	FSM	ENSMUSG00000031577.11	ENSMUST00000209851.2	3133	7	11	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAAAAAAAAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	31640353	31651082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31641528_31643536_31643724_31644241_31644335_31645541_31645730_31645805_31645950_31648620_31648784_31649909
ENSMUSG00000031577.11_3	chr8	+	1173	5	FSM	ENSMUSG00000031577.11	ENST00000520636.5	1188	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTAAGGCAAGCAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	31641033	31648780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31641528_31643536_31643724_31645541_31645730_31645805_31645950_31648620
ENSMUSG00000031578.6_0	chr8	-	1882	10	FSM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACCACAAACTATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	31658784	31649502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737_31656788_31658692
ENSMUSG00000031578.6_1	chr8	-	1790	9	ISM	ENSMUSG00000031578.6	ENSMUST00000033983.6	1902	10	2005	12	2005	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACCACAAACTATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	31656787	31649502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_31650606_31650786_31650853_31651749_31651864_31653058_31653134_31654745_31654801_31656089_31656242_31656401_31656467_31656550_31656661_31656737
ENSMUSG00000031583.14_0	chr8	-	6251	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033991.13	6262	34	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTGAAAAAAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	33875553	33724420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875479
ENSMUSG00000031583.14_5	chr8	-	4995	34	FSM	ENSMUSG00000031583.14	ENSMUST00000033990.7	5019	34	15	9	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAACTCTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	33875485	33725718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_33726488_33730976_33731183_33738949_33739113_33741732_33741865_33745525_33745641_33746976_33747090_33747225_33747302_33756978_33757053_33757812_33757886_33758750_33758849_33758923_33759095_33770799_33770942_33774645_33774739_33775164_33775267_33778783_33778966_33782585_33782761_33784931_33785120_33795681_33795789_33800738_33800822_33806371_33806441_33807225_33807335_33807573_33807642_33809179_33809256_33810497_33810637_33812315_33812397_33814194_33814622_33819129_33819245_33824203_33824274_33826024_33826175_33833004_33833154_33833574_33833721_33842101_33842215_33843322_33843428_33875369
ENSMUSG00000031584.17_0	chr8	+	2652	13	FSM	ENSMUSG00000031584.17	ENSMUST00000033992.9	2673	13	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAACTATGCTGCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	34143277	34188182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34175571_34175731_34179368_34179481_34183826_34183959_34185026_34185161_34187173
ENSMUSG00000031584.17_6	chr8	+	1137	11	FSM	ENSMUSG00000031584.17	ENST00000541648.5	1158	11	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAAGGTACTGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34143616	34185152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34143808_34159180_34159208_34159920_34160010_34161550_34161621_34164114_34164263_34170290_34170346_34171492_34171593_34172620_34172708_34179368_34179481_34183826_34183959_34185026
ENSMUSG00000031585.14_0	chr8	+	1611	8	FSM	ENSMUSG00000031585.14	ENSMUST00000170705.8	1634	8	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACACGAAATATAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	34221871	34267180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34222017_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_2	chr8	+	1548	8	FSM	ENSMUSG00000031585.14	ENSMUST00000167264.8	1566	8	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACACGAAATATAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	34222075	34267180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34222158_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_6	chr8	+	1651	8	FSM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	4	9	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGTTAATGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34222370	34267192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_34222544_34225761_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031585.14_7	chr8	+	1467	7	ISM	ENSMUSG00000031585.14	ENSMUST00000171010.8	1664	8	3394	21	3394	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACACGAAATATAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	34225760	34267180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_34225935_34242468_34242561_34245879_34245988_34248583_34248767_34252037_34252132_34265971_34266088_34266480
ENSMUSG00000031586.18_0	chr8	-	2542	9	FSM	ENSMUSG00000031586.18	ENSMUST00000191473.7	2547	9	2	3	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATGATTTGTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	34419867	34272674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34274215_34279419_34279524_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031586.18_1	chr8	-	2440	8	FSM	ENSMUSG00000031586.18	ENSMUST00000053251.12	2466	8	18	8	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATTACATGATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34419873	34272678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34274215_34285109_34285179_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031586.18_2	chr8	-	1274	9	FSM	ENSMUSG00000031586.18	ENST00000287771.9	1289	9	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGGACTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34419651	34273816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34274215_34279419_34279524_34285109_34285269_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031586.18_4	chr8	-	1019	7	FSM	ENSMUSG00000031586.18	ENSMUST00000033995.14	1039	7	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGACTACAGCGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34419817	34293970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34294211_34296744_34296879_34324331_34324483_34353013_34353077_34354360_34354400_34356354_34356433_34419503
ENSMUSG00000031590.9_0	chr8	-	1024	9	FSM	ENSMUSG00000031590.9	ENSMUST00000033999.8	1039	9	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTCTCGAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41870096	41850495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41850682_41851992_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259_41864386_41867839_41867911_41869936
ENSMUSG00000031590.9_10	chr8	-	600	6	FSM	ENSMUSG00000031590.9	ENST00000634617.1	614	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTAATTGTATATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	41864380	41851996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41852104_41852603_41852694_41853798_41853904_41860677_41860797_41863300_41863359_41864259
ENSMUSG00000031590.9_11	chr8	-	595	6	FSM	ENSMUSG00000031590.9	ENST00000635667.1	610	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTAATTGTATATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	41864379	41851996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41852104_41852603_41852694_41853798_41853904_41860681_41860797_41863300_41863359_41864259
ENSMUSG00000031590.9_16	chr8	-	663	7	FSM	ENSMUSG00000031590.9	ENST00000278882.8	669	7	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTAATTGTATATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	41867904	41851996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41852104_41852601_41852694_41853798_41853904_41860681_41860797_41863300_41863350_41864255_41864386_41867839
ENSMUSG00000031591.15_0	chr8	-	2750	14	FSM	ENSMUSG00000031591.15	ENSMUST00000034000.15	2773	14	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGAGTCAATTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	41827799	41793245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807050_41807138_41807863_41807955_41813289_41813337_41827546
ENSMUSG00000031591.15_14	chr8	-	747	8	NNC	ENSMUSG00000031591.15	novel	751	8	NA	NA	4	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGAGGACGTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	41807946	41794619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799223_41804927_41805010_41807050_41807138_41807863
ENSMUSG00000031591.15_15	chr8	-	739	8	FSM	ENSMUSG00000031591.15	ENST00000636128.1	751	8	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGAGGACGTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	41807938	41794619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41804930_41805010_41807050_41807138_41807863
ENSMUSG00000031591.15_8	chr8	-	981	11	FSM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGAGGACGTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	41807946	41794619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930_41805010_41807863
ENSMUSG00000031591.15_9	chr8	-	899	10	ISM	ENSMUSG00000031591.15	ENST00000314146.10	985	11	2940	0	2940	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTGAGGACGTACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	41805010	41794619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_41794723_41795921_41795979_41796555_41796680_41796766_41796899_41799143_41799226_41799332_41799388_41799967_41800113_41801124_41801171_41802586_41802662_41804930
ENSMUSG00000031592.11_1	chr8	+	6599	38	FSM	ENSMUSG00000031592.11	ENSMUST00000045218.9	6624	38	16	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTAAAGTATGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	41692825	41785372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ENSMUSG00000031592.11_11	chr8	+	6473	39	FSM	ENSMUSG00000031592.11	ENSMUST00000211247.2	6484	39	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTATAAAATGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	41692820	41785124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41693001_41709032_41709148_41710827_41711074_41712073_41712344_41714047_41714219_41714396_41714514_41720223_41720402_41723477_41723588_41725280_41725498_41727136_41727336_41728031_41728206_41728689_41728845_41728962_41729190_41732787_41732931_41733058_41733189_41735616_41735758_41736592_41736784_41739001_41739200_41740718_41740939_41741045_41741192_41741667_41741859_41743757_41743930_41746494_41746854_41757023_41757189_41762556_41762730_41763045_41763178_41765194_41765316_41766338_41766498_41766881_41767019_41768956_41769092_41774890_41775089_41777991_41778055_41778300_41778437_41778863_41779025_41780563_41780637_41781805_41782063_41783669_41783763_41783842_41783958_41785019
ENSMUSG00000031595.10_0	chr8	+	1522	6	FSM	ENSMUSG00000031595.10	ENSMUST00000034004.10	1548	6	7	19	7	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	1237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAAAAAAAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	41379276	41443803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41379463_41391126_41391425_41429987_41430140_41438570_41438865_41441841_41441982_41443351
ENSMUSG00000031596.16_0	chr8	+	3656	12	FSM	ENSMUSG00000031596.16	ENSMUST00000098816.10	3677	12	16	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGATTCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	41315448	41371088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ENSMUSG00000031596.16_1	chr8	+	7883	12	FSM	ENSMUSG00000031596.16	ENSMUST00000057784.15	7910	12	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAGGGCTATACTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	41315466	41375336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41315595_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361434_41361572_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ENSMUSG00000031596.16_3	chr8	+	7618	12	FSM	ENSMUSG00000031596.16	ENSMUST00000117077.8	7626	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTTACGATGGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	41327984	41375099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_41328082_41351973_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ENSMUSG00000031596.16_4	chr8	+	7518	11	ISM	ENSMUSG00000031596.16	ENSMUST00000117077.8	7626	12	23989	11	499	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATGACTTACGATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	41351973	41375096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_41352366_41353092_41353249_41355535_41355702_41357482_41357617_41358541_41358765_41361092_41361233_41364031_41364135_41365516_41365723_41366999_41367167_41367956_41368066_41369374
ENSMUSG00000031600.12_0	chr8	+	5984	12	FSM	ENSMUSG00000031600.12	ENSMUST00000098817.4	6002	12	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTAGTTGCCTTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40964835	41003792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_40965275_40979967_40980043_40981358_40981474_40982149_40982251_40989910_40990137_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984_40998066_40999316
ENSMUSG00000031600.12_4	chr8	+	1064	10	FSM	ENSMUSG00000031600.12	ENST00000520639.1	1069	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGGTATGCATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	40979969	40998058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_40980043_40981358_40981474_40982149_40982251_40989910_40990141_40992350_40992422_40993719_40993848_40993929_40993989_40994065_40994135_40996850_40996995_40997984
ENSMUSG00000031601.17_0	chr8	-	2605	7	FSM	ENSMUSG00000031601.17	ENSMUST00000034012.10	2615	7	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40964787	40945582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUSG00000031601.17_1	chr8	-	2535	7	FSM	ENSMUSG00000031601.17	ENSMUST00000132032.8	2542	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTGTGACTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	40968881	40945582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_40947157_40948845_40948957_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40968744
ENSMUSG00000031601.17_2	chr8	-	2429	6	FSM	ENSMUSG00000031601.17	ENSMUST00000135269.8	2461	6	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTTTTCCTATATGG	NA	NA	NA	NA	NA	NA	NA	NA	40964736	40945596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_40947157_40952335_40952481_40953792_40953955_40960495_40960690_40963055_40963268_40964580
ENSMUSG00000031604.11_0	chr8	-	2026	6	FSM	ENSMUSG00000031604.11	ENSMUST00000034015.11	2044	6	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	3863	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGGAATGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	65186816	65171180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_65172216_65173375_65173531_65175497_65175625_65176621_65176771_65180657_65180943_65186541
ENSMUSG00000031605.9_0	chr8	-	3390	15	FSM	ENSMUSG00000031605.9	ENSMUST00000034017.9	3412	15	4	18	4	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAGAAATAACCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	65302665	65192726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_65194009_65195988_65196133_65202065_65202207_65202728_65202858_65204762_65204865_65205682_65205881_65207318_65207437_65211125_65211276_65212766_65212884_65217156_65217267_65232731_65232895_65264331_65264454_65275642_65275750_65287094_65287221_65302284
ENSMUSG00000031608.14_0	chr8	-	3381	12	FSM	ENSMUSG00000031608.14	ENSMUST00000110316.3	3413	12	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTGCCAAAAAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	58106011	57977739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_57979286_57984635_57984765_57985661_57985761_57989616_57989836_57991119_57991243_57993053_57993172_57995868_57996052_57998362_57998443_57998702_57998834_58005477_58005645_58036800_58037262_58105886
ENSMUSG00000031609.4_0	chr8	-	1164	4	FSM	ENSMUSG00000031609.4	ENSMUST00000034022.4	1178	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTATAGCTGCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	57940886	57935746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_57936085_57938075_57938175_57938543_57938670_57940285
ENSMUSG00000031613.10_0	chr8	+	1139	5	FSM	ENSMUSG00000031613.10	ENST00000542498.5	1166	5	19	8	19	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTAGTAATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	56747497	56773653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56773092
ENSMUSG00000031613.10_1	chr8	+	650	5	FSM	ENSMUSG00000031613.10	ENST00000422112.6	670	5	10	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGCACAAGTGACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	56747629	56773259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_56747748_56747973_56748098_56770784_56770862_56772027_56772192_56773092
ENSMUSG00000031613.10_2	chr8	+	1668	7	FSM	ENSMUSG00000031613.10	ENSMUST00000034026.10	1683	7	8	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTCACATAAATTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	56747627	56774071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56772027_56772192_56773092
ENSMUSG00000031613.10_3	chr8	+	1086	6	FSM	ENSMUSG00000031613.10	ENST00000296521.11	1101	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTAGTAATAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	56747627	56773653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_56747748_56747973_56748098_56751390_56751498_56760628_56760726_56770784_56770862_56773092
ENSMUSG00000031616.8_0	chr8	-	3612	8	FSM	ENSMUSG00000031616.8	ENSMUST00000034029.8	3625	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAATTTTCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	78451056	78389663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78401541_78401741_78415697_78415826_78446656_78447132_78450724
ENSMUSG00000031616.8_4	chr8	-	930	5	FSM	ENSMUSG00000031616.8	ENST00000506066.1	949	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAACCCTCCGCAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	78447055	78391610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78446656
ENSMUSG00000031616.8_5	chr8	-	1218	7	FSM	ENSMUSG00000031616.8	ENST00000511804.5	1242	7	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTAACCCTCCGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	78451087	78391613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_78391746_78393951_78394061_78394427_78394562_78398145_78398299_78401541_78401741_78415697_78415826_78450724
ENSMUSG00000031617.17_0	chr8	-	2657	10	FSM	ENSMUSG00000031617.17	ENSMUST00000034030.15	2678	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTTAAAACTCTTACG	NA	NA	NA	NA	NA	NA	NA	NA	78337269	78322618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_78323810_78324437_78324610_78325182_78325283_78326285_78326399_78328043_78328138_78329486_78329562_78331250_78331457_78332792_78332830_78332915_78333047_78336731
ENSMUSG00000031618.14_0	chr8	+	5744	9	FSM	ENSMUSG00000031618.14	ENST00000625323.2	5758	9	10	4	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACCTGTTGTCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	77628858	77971636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_77629169_77634898_77636658_77812155_77812308_77881830_77881948_77912404_77912744_77914148_77914294_77937272_77937404_77944056_77944215_77969003
ENSMUSG00000031622.17_0	chr8	+	1016	7	FSM	ENSMUSG00000031622.17	ENSMUST00000109950.5	1024	7	8	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTTATGTGCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	73449920	73466534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73466357
ENSMUSG00000031622.17_3	chr8	+	4099	19	FSM	ENSMUSG00000031622.17	ENSMUST00000004494.16	4115	19	11	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAAGCCTCAGGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	73449926	73484824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73450037_73450671_73450779_73452164_73452319_73457708_73457907_73459972_73460117_73465996_73466117_73468101_73468192_73468437_73468557_73471085_73471294_73471521_73471639_73473037_73473277_73474312_73474497_73476346_73476897_73477063_73477234_73479794_73479969_73480172_73480266_73483100_73483196_73483475_73483681_73483802
ENSMUSG00000031626.19_0	chr8	+	6314	26	FSM	ENSMUSG00000031626.19	ENSMUST00000067065.14	6337	26	16	7	-4	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCTTGGCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	45960840	46280936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_45960995_46111839_46111979_46189189_46189240_46194523_46194617_46198456_46198484_46198753_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46235838_46235998_46236579_46236664_46238305_46238363_46243012_46243063_46245817_46246006_46248014_46249596_46252746_46252836_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276765_46276873_46278781
ENSMUSG00000031626.19_1	chr8	+	4626	25	FSM	ENSMUSG00000031626.19	ENSMUST00000132139.9	4644	25	12	6	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCTTGGCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	45960856	46280936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_45960995_46098797_46098890_46111839_46111979_46189189_46189240_46194523_46194617_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46235838_46235998_46238305_46238363_46243012_46243063_46245817_46246006_46252746_46252836_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276795_46276873_46278781
ENSMUSG00000031626.19_3	chr8	+	2841	23	FSM	ENSMUSG00000031626.19	ENST00000393528.7	2860	23	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCAGGAGGGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	46080776	46278986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46081310_46111839_46111979_46189189_46189240_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46236579_46236664_46238305_46238363_46243012_46243063_46245817_46246006_46252746_46252836_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276765_46276873_46278781
ENSMUSG00000031626.19_5	chr8	+	1676	12	FSM	ENSMUSG00000031626.19	ENSMUST00000134675.8	1692	12	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAGAAATCTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	46111709	46229906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46111979_46189189_46189240_46194523_46194617_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46229439
ENSMUSG00000031626.19_6	chr8	+	3862	20	FSM	ENSMUSG00000031626.19	ENSMUST00000130011.8	3871	20	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAAAGAAACATCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	46115032	46280620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46115119_46189189_46189240_46198456_46198484_46198822_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46225570_46225746_46228625_46228741_46235838_46235998_46243012_46243063_46245817_46246006_46252746_46252836_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276765_46276873_46278781
ENSMUSG00000031626.19_9	chr8	+	4012	18	FSM	ENSMUSG00000031626.19	ENST00000448662.6	4035	18	17	6	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTACCTTGGCTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	46198768	46280936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46198879_46212089_46212229_46216055_46216229_46222865_46222933_46223582_46223628_46225570_46225746_46228625_46228741_46238305_46238363_46243012_46243063_46245817_46246006_46252746_46252836_46254001_46254049_46256668_46256784_46256869_46256999_46258689_46258891_46272755_46272806_46276765_46276873_46278781
ENSMUSG00000031627.10_0	chr8	+	2466	9	FSM	ENSMUSG00000031627.10	ENSMUST00000034041.9	2497	9	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTTTAATGGGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	47192786	47300482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_47192972_47246527_47246621_47259505_47259606_47260256_47260434_47260739_47260787_47271825_47271944_47290708_47290874_47297855_47297903_47298948
ENSMUSG00000031628.10_0	chr8	+	2578	7	FSM	ENSMUSG00000031628.10	ENSMUST00000211115.2	2601	7	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATTATCAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	47070337	47092713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_47070537_47082768_47082837_47085351_47085477_47087232_47087362_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_16	chr8	+	777	5	ISM	ENSMUSG00000031628.10	ENST00000308394.9	843	6	2578	5	2578	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGGGGTGGGGGGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	47085359	47091190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_47085477_47087232_47087359_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031628.10_7	chr8	+	835	6	FSM	ENSMUSG00000031628.10	ENST00000308394.9	843	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGATTGGGGGTGGGGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	47082781	47091187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_47082835_47085351_47085477_47087232_47087359_47088411_47088588_47089236_47089358_47090953
ENSMUSG00000031629.15_0	chr8	+	2915	13	FSM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTTCCTAGATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	47005071	47033035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_47005163_47007049_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000031629.15_5	chr8	+	2825	12	ISM	ENSMUSG00000031629.15	ENSMUST00000034045.15	2931	13	1986	7	1927	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTTCCTAGATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	47007048	47033035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_47007099_47009116_47009229_47012903_47013007_47014812_47014874_47015452_47015681_47021644_47021715_47023005_47023115_47025786_47025866_47026467_47026516_47026883_47026946_47029260_47029418_47031289
ENSMUSG00000031631.16_0	chr8	+	4603	5	FSM	ENSMUSG00000031631.16	ENSMUST00000034048.13	4619	5	4	12	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAACCAAGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	46616691	46648615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46616787_46622595_46623690_46634754_46635024_46644616_46644768_46645621
ENSMUSG00000031631.16_3	chr8	+	2025	6	FSM	ENSMUSG00000031631.16	ENSMUST00000110376.8	2043	6	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAGAAGAACCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46616777	46648611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46616901_46622595_46623690_46634754_46635024_46644616_46644768_46645621_46645729_46648330
ENSMUSG00000031631.16_4	chr8	+	4508	4	FSM	ENSMUSG00000031631.16	ENSMUST00000164504.2	4521	4	3	10	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAACCAAGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	46622595	46648615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46623690_46634754_46635024_46644616_46644768_46645621
ENSMUSG00000031633.5_0	chr8	-	1906	4	FSM	ENSMUSG00000031633.5	ENSMUST00000034049.5	1925	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAGTTGACTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46664311	46659842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_46660658_46661434_46661576_46662058_46662546_46663848
ENSMUSG00000031634.14_0	chr8	+	1630	12	FSM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAAAATATTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46428564	46449985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46428626_46432245_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031634.14_7	chr8	+	1563	11	ISM	ENSMUSG00000031634.14	ENSMUST00000034051.7	1640	12	3687	10	3687	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCCAAAATATTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	46432251	46449985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_46432333_46433351_46433530_46433609_46433677_46436559_46436718_46437077_46437271_46438358_46438506_46444784_46444950_46445144_46445270_46447051_46447129_46448574_46448700_46449738
ENSMUSG00000031636.8_0	chr8	+	1592	7	FSM	ENSMUSG00000031636.8	ENSMUST00000034053.7	1604	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCATTGTGAAGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	46338507	46372583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46338710_46349784_46349937_46353511_46353597_46361505_46361694_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_16	chr8	+	748	6	ISM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	11177	2	11177	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAGAACACTCACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	46349783	46372060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_46349937_46353511_46353597_46362055_46362124_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_3	chr8	+	842	7	FSM	ENSMUSG00000031636.8	ENST00000620787.5	852	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAGAACACTCACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	46338614	46372060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46338710_46349784_46349937_46353511_46353597_46362055_46362124_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031636.8_4	chr8	+	936	7	FSM	ENSMUSG00000031636.8	ENST00000629667.2	953	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTTAAATCCTTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	46338614	46372042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_46338710_46353511_46353597_46362055_46362124_46366733_46366998_46368165_46368297_46370494_46370607_46371861
ENSMUSG00000031641.15_0	chr8	+	4296	5	FSM	ENSMUSG00000031641.15	ENSMUST00000034058.14	4309	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGGCCTCCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	61940779	61959727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61941025_61942973_61943095_61944578_61944713_61948101_61948237_61956066
ENSMUSG00000031642.10_0	chr8	+	5473	12	FSM	ENSMUSG00000031642.10	ENSMUST00000034060.7	5479	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTCTAGGCCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	61676905	61849099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61677381_61678865_61679353_61782252_61782529_61782956_61783053_61802433_61802737_61806771_61806883_61814621_61814807_61816108_61816280_61825541_61825802_61827042_61827402_61837610_61837964_61846702
ENSMUSG00000031644.20_0	chr8	+	5464	34	FSM	ENSMUSG00000031644.20	ENSMUST00000120689.8	5478	34	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGTACCTGAAGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	61446235	61584366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61524784_61524869_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ENSMUSG00000031644.20_3	chr8	+	5380	33	FSM	ENSMUSG00000031644.20	ENSMUST00000034065.14	5401	33	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAAGTATATCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	61446242	61584373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61446798_61459662_61459811_61460192_61460290_61465126_61465225_61469256_61469341_61472876_61472945_61473069_61473157_61475244_61475300_61481692_61481894_61487058_61487120_61488965_61489118_61496266_61496327_61496948_61497009_61497093_61497142_61497292_61497368_61502817_61502982_61507553_61507657_61525309_61525394_61525788_61525867_61526538_61526635_61539432_61539562_61542471_61542532_61542604_61542834_61551409_61551563_61552913_61553079_61557146_61557268_61558584_61558674_61559828_61560068_61573942_61574095_61577145_61577355_61578029_61578161_61578997_61579131_61583177
ENSMUSG00000031645.5_0	chr8	-	1376	10	FSM	ENSMUSG00000031645.5	ENST00000264692.8	1394	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTTCAACTGGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	45703196	45694485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_45694647_45695253_45695394_45695902_45695999_45698665_45698842_45699783_45699944_45701590_45701698_45701780_45701944_45702047_45702158_45702541_45702702_45703093
ENSMUSG00000031647.11_0	chr8	+	4142	2	FSM	ENSMUSG00000031647.11	ENSMUST00000161421.2	4142	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATCCTGCTTATACCTC	NA	NA	NA	NA	NA	NA	NA	NA	61085860	61127967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61086093_61124057
ENSMUSG00000031647.11_1	chr8	+	6318	3	FSM	ENSMUSG00000031647.11	ENSMUST00000160719.8	6335	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGTGTGTCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	61085903	61129756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61086093_61109493_61109924_61124057
ENSMUSG00000031647.11_3	chr8	+	2202	3	FSM	ENSMUSG00000031647.11	ENSMUST00000161702.8	2215	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTCTGTGTCACCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61108150	61125500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61108480_61109493_61109924_61124057
ENSMUSG00000031652.12_0	chr8	-	6445	7	FSM	ENSMUSG00000031652.12	ENSMUST00000034074.8	6469	7	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGAGAGCTGGAGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	87611867	87567771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ENSMUSG00000031652.12_1	chr8	-	3473	8	FSM	ENSMUSG00000031652.12	ENST00000262384.4	3486	8	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCATCCATGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87611806	87570262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_87570470_87570889_87571670_87573442_87573551_87575074_87575183_87578252_87578350_87579786_87579918_87587053_87588739_87611449
ENSMUSG00000031654.17_0	chr8	-	2796	3	FSM	ENSMUSG00000031654.17	ENSMUST00000034076.16	2800	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCCTTTCCTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88199233	88195032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_88197080_88198319_88198440_88198604
ENSMUSG00000031657.17_0	chr8	+	3236	15	FSM	ENSMUSG00000031657.17	ENSMUST00000034079.14	3251	15	8	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATGTTTTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	88864490	88898648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_88864786_88864902_88865076_88866519_88866608_88868299_88868410_88871156_88871267_88874174_88874316_88876719_88876998_88883089_88883181_88883297_88883456_88883680_88883764_88884756_88884894_88888505_88888595_88891515_88891660_88893623_88893801_88897486
ENSMUSG00000031659.14_1	chr8	+	5187	28	FSM	ENSMUSG00000031659.14	ENSMUST00000169037.9	5198	28	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCCACAGAACGCACTAC	NA	NA	NA	NA	NA	NA	NA	NA	88999035	89055661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_88999242_89021654_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_15	chr8	+	5931	28	FSM	ENSMUSG00000031659.14	ENSMUST00000098521.4	5937	28	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCTAAGGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89020862	89056583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89020891_89021654_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_20	chr8	+	5891	27	ISM	ENSMUSG00000031659.14	ENSMUST00000098521.4	5937	28	804	6	804	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCTAAGGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89021666	89056583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_30	chr8	+	3910	24	FSM	ENSMUSG00000031659.14	ENST00000394697.7	3928	24	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCAGCAGCAAAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	89033235	89055146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044702_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050454_89051153_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_5	chr8	+	5930	28	FSM	ENSMUSG00000031659.14	ENSMUST00000168545.8	5937	28	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCTAAGGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89009619	89056583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89009647_89021654_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031659.14_8	chr8	+	5945	28	FSM	ENSMUSG00000031659.14	ENSMUST00000171456.9	5951	28	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCCTAAGGTGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	89015774	89056583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89015817_89021654_89021763_89022199_89022308_89032977_89033399_89035268_89035473_89036319_89036488_89037161_89037312_89037626_89037776_89038827_89038940_89040716_89040845_89042084_89042244_89042375_89042509_89044482_89044675_89044931_89044967_89045426_89045508_89045701_89045775_89046773_89046872_89048411_89048497_89048724_89048851_89049562_89049662_89050259_89050436_89051061_89051228_89051386_89051543_89051994_89052142_89052723_89052829_89053018_89053134_89054000_89054126_89054299
ENSMUSG00000031660.14_0	chr8	-	3600	17	FSM	ENSMUSG00000031660.14	ENSMUST00000034085.8	3625	17	19	6	19	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGCCTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89088803	89057692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060845_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUSG00000031660.14_4	chr8	-	2071	16	ISM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	258	7	258	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGGCTCGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89088329	89058945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129
ENSMUSG00000031660.14_5	chr8	-	2134	17	FSM	ENSMUSG00000031660.14	ENST00000394689.2	2141	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGAGGCTCGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89088587	89058945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_89059172_89059508_89059653_89060365_89060510_89060732_89060848_89063708_89063766_89066036_89066149_89069362_89069499_89070209_89070318_89071776_89071853_89072457_89072582_89073501_89073687_89078427_89078539_89081256_89081402_89084164_89084223_89084527_89084658_89088129_89088339_89088533
ENSMUSG00000031665.8_0	chr8	-	435	1	NIC	ENSMUSG00000031665.8	novel	5265	4	NA	NA	13608	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAAGCTGCCAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89755447	89755012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_89755000_89755400
ENSMUSG00000031665.8_1	chr8	-	507	2	FSM	ENSMUSG00000031665.8	ENST00000566102.1	520	2	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAAGCTGCCAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89769052	89755012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_89755447_89768979
ENSMUSG00000031666.16_0	chr8	+	4911	22	FSM	ENSMUSG00000031666.16	ENSMUST00000034091.8	4925	22	6	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTAGTCTCTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	91796690	91850464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823391_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ENSMUSG00000031666.16_6	chr8	+	4782	22	FSM	ENSMUSG00000031666.16	ENSMUST00000209518.2	4792	22	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATAAATTAGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	91796785	91850460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_91797035_91800770_91800902_91802542_91802744_91805507_91805573_91809926_91810056_91812060_91812222_91812302_91812368_91813610_91813798_91816682_91816850_91822176_91822287_91823421_91823496_91826667_91826806_91827975_91828141_91828825_91828938_91832907_91833175_91833330_91833612_91833685_91833863_91839145_91839218_91840612_91840713_91841668_91841878_91842289_91842455_91848903
ENSMUSG00000031667.17_14	chr8	-	2060	10	FSM	ENSMUSG00000031667.17	ENSMUST00000125257.3	2079	10	11	8	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAATCAATAGCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	91860644	91850204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91860527
ENSMUSG00000031667.17_2	chr8	-	2184	11	FSM	ENSMUSG00000031667.17	ENSMUST00000120213.9	2200	11	14	2	14	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTATTTTTTTAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	91860611	91850128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_91851307_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227_91856434_91857668_91857781_91858550_91858632_91860527
ENSMUSG00000031667.17_20	chr8	-	1824	8	FSM	ENSMUSG00000031667.17	ENST00000300245.8	1841	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAATCAATAGCTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	91856423	91850204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_91851310_91851450_91851512_91852444_91852553_91852652_91852752_91852825_91852915_91853301_91853403_91853492_91853558_91856227
ENSMUSG00000031668.15_0	chr6	+	4494	17	FSM	ENSMUSG00000031668.15	ENSMUST00000034093.15	4513	17	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTAATAGTTGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70821509	70882221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_70822006_70835370_70835501_70853661_70853857_70855818_70855953_70858467_70858703_70859248_70859412_70860578_70860720_70861753_70861877_70862144_70862366_70864783_70864897_70866458_70866582_70867048_70867199_70869338_70870126_70873899_70874068_70877215_70877318_70878388_70878452_70881071
ENSMUSG00000031669.11_0	chr8	+	2511	3	FSM	ENSMUSG00000031669.11	ENSMUST00000034094.11	2519	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTTGTCACTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	96360088	96371688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96360412_96364437_96364672_96369734
ENSMUSG00000031669.11_1	chr8	+	649	2	FSM	ENSMUSG00000031669.11	ENSMUST00000212434.2	654	2	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTTAAGAATACATACTG	NA	NA	NA	NA	NA	NA	NA	NA	96360185	96364860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96360412_96364437
ENSMUSG00000031669.11_2	chr8	+	830	2	FSM	ENSMUSG00000031669.11	ENST00000328514.11	845	2	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCTGCCTACCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	96360230	96370383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96360412_96369734
ENSMUSG00000031671.12_0	chr8	+	1698	7	FSM	ENSMUSG00000031671.12	ENSMUST00000034096.6	1707	7	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCAAACTTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	96442513	96445634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96442899_96442980_96443123_96443234_96443430_96443548_96443670_96444548_96444730_96444820_96444964_96445103
ENSMUSG00000031672.9_0	chr8	-	2423	10	FSM	ENSMUSG00000031672.9	ENSMUST00000034097.8	2530	10	97	10	97	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACCCAGCCACTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	96615078	96590771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96591880_96593448_96593600_96596099_96596266_96597402_96597554_96598518_96598624_96598803_96598966_96601031_96601092_96602373_96602503_96604340_96604498_96614844
ENSMUSG00000031673.7_0	chr8	-	5627	13	FSM	ENSMUSG00000031673.7	ENSMUST00000075190.5	5647	13	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATGGAATCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	103512260	103358732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103406243_103406644_103447044_103447163_103511527
ENSMUSG00000031673.7_3	chr8	-	2311	11	FSM	ENSMUSG00000031673.7	ENST00000566827.5	2340	11	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATCTAGAAGATGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	103447146	103360899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_103361443_103363559_103363812_103374094_103374213_103374429_103374564_103377254_103377392_103384820_103385075_103391235_103391424_103394629_103394798_103396684_103396805_103400443_103400739_103447044
ENSMUSG00000031681.17_0	chr8	-	3074	7	FSM	ENSMUSG00000031681.17	ENSMUST00000066091.14	3099	7	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAAATGTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	80126131	80065032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_80066422_80070282_80070540_80076219_80076442_80079958_80080076_80082840_80083099_80098412_80098994_80125881
ENSMUSG00000031683.17_0	chr8	-	3774	5	FSM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTGAAATCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79547763	79531505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615_79546715_79547676
ENSMUSG00000031683.17_1	chr8	-	3689	4	ISM	ENSMUSG00000031683.17	ENSMUST00000130325.8	3792	5	1053	12	1053	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTGAAATCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	79546716	79531505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_79534875_79536575_79536690_79539604_79539710_79546615
ENSMUSG00000031683.17_3	chr8	-	2102	4	FSM	ENSMUSG00000031683.17	ENSMUST00000051867.7	2107	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGTTGCCACCATCT	NA	NA	NA	NA	NA	NA	NA	NA	79547764	79533079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79534875_79536575_79536690_79539604_79539710_79547676
ENSMUSG00000031683.17_4	chr8	-	2008	3	FSM	ENSMUSG00000031683.17	ENSMUST00000146824.2	541	3	132	-1599	132	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCCCAACCACAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	79539711	79533087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79534875_79536575_79536690_79539604
ENSMUSG00000031684.12_0	chr8	+	3480	10	FSM	ENSMUSG00000031684.12	ENSMUST00000209490.2	3485	10	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAATCTCTGGAAATGTC	NA	NA	NA	NA	NA	NA	NA	NA	79235981	79460628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79456246_79456393_79458237
ENSMUSG00000031684.12_1	chr8	+	3587	12	FSM	ENSMUSG00000031684.12	ENSMUST00000034111.10	3595	12	5	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAATCTCTGGAAATGTCG	NA	NA	NA	NA	NA	NA	NA	NA	79236001	79460629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79236304_79242214_79242298_79251790_79251928_79257711_79257788_79305347_79305387_79389615_79389652_79413213_79413298_79423794_79423961_79425148_79425201_79433503_79433578_79456246_79456393_79458237
ENSMUSG00000031684.12_2	chr8	+	615	3	FSM	ENSMUSG00000031684.12	ENST00000502607.1	638	3	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCAAAGTGTATAATGC	NA	NA	NA	NA	NA	NA	NA	NA	79236012	79245957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79236304_79242214_79242298_79245716
ENSMUSG00000031691.15_0	chr8	+	2904	25	FSM	ENSMUSG00000031691.15	ENST00000592287.5	2914	25	5	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTCAGTGGGACCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	85763514	85782264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85763607_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_16	chr8	+	4860	25	FSM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	21	3	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	85763817	85784209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85763921_85765006_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_24	chr8	+	4762	24	ISM	ENSMUSG00000031691.15	ENSMUST00000166592.2	4884	25	1201	7	1201	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAAACACTTGGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85764997	85784205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031691.15_7	chr8	+	4861	25	FSM	ENSMUSG00000031691.15	ENSMUST00000093360.12	4863	25	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTGGTGTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	85763545	85784209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85763607_85764963_85765119_85767090_85767167_85767242_85767393_85771040_85771148_85771230_85771365_85771454_85771537_85771611_85771735_85771826_85771946_85773749_85773811_85773918_85774085_85774211_85774365_85776564_85776791_85776987_85777160_85778166_85778254_85778327_85778436_85778517_85778677_85780087_85780176_85780384_85780484_85780954_85781051_85781320_85781427_85781630_85781731_85781807_85781883_85781968_85782097_85782179
ENSMUSG00000031696.10_0	chr8	-	3458	17	FSM	ENSMUSG00000031696.10	ENSMUST00000034131.10	3474	17	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTTGGATTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	86026420	85987025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85987939_85988623_85988768_85989939_85990180_85990772_85990953_85997321_85997445_86000100_86000257_86001448_86001657_86005332_86005482_86005588_86005686_86007864_86007975_86008469_86008554_86010621_86010836_86012969_86013153_86014324_86014449_86016334_86016432_86021487_86021587_86026083
ENSMUSG00000031697.13_0	chr8	+	1447	6	FSM	ENSMUSG00000031697.13	ENSMUST00000170141.3	1466	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCATTTGAGTTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	86026330	86034901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_86026622_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031697.13_6	chr8	+	1269	7	FSM	ENSMUSG00000031697.13	ENSMUST00000034132.13	1287	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTTTTTTAAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86026429	86034692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_86026622_86027737_86027868_86029424_86029589_86029990_86030081_86031837_86031951_86032845_86032948_86034214
ENSMUSG00000031700.12_0	chr8	+	3626	12	FSM	ENSMUSG00000031700.12	ENSMUST00000034136.12	3639	12	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGCAGCTTGGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	86219216	86254188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_86219319_86219533_86219799_86229893_86229984_86232207_86232317_86235807_86235939_86238741_86238986_86242786_86242867_86244605_86244743_86246076_86246252_86247967_86248124_86249884_86249998_86252164
ENSMUSG00000031701.7_0	chr8	-	2900	9	FSM	ENSMUSG00000031701.7	ENSMUST00000034138.7	2919	9	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACCAGTTCCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	86281963	86264270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_86266037_86266678_86266807_86266936_86267082_86273141_86273339_86275192_86275327_86275510_86275592_86279815_86280040_86280545_86280606_86281798
ENSMUSG00000031703.9_0	chr8	-	3291	18	FSM	ENSMUSG00000031703.9	ENSMUST00000034140.9	3306	18	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAATAAAAACGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	86567539	86444210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_86445557_86449259_86449378_86452142_86452226_86452794_86452920_86459001_86459081_86462753_86462798_86464745_86464855_86466856_86467008_86490863_86491037_86493586_86493682_86502768_86502851_86507144_86507207_86537173_86537269_86557811_86557887_86561649_86561708_86562974_86563121_86565556_86565630_86567162
ENSMUSG00000031706.8_0	chr8	+	4162	21	FSM	ENSMUSG00000031706.8	ENSMUST00000005600.6	4172	21	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTGTCTACTGATGACG	NA	NA	NA	NA	NA	NA	NA	NA	84793468	84823615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84793678_84800359_84800699_84806491_84806602_84806753_84806838_84807743_84807852_84809276_84809391_84810710_84810804_84812201_84812297_84814334_84814702_84816739_84816922_84817578_84817699_84817994_84818108_84819163_84819283_84819408_84819519_84819602_84819755_84819831_84819930_84821355_84821506_84821578_84821788_84822024_84822179_84822256_84822303_84822425
ENSMUSG00000031708.18_0	chr8	-	1145	13	FSM	ENSMUSG00000031708.18	ENSMUST00000019382.17	1158	13	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACTGACTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84321097	84298332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_1	chr8	-	1104	12	FSM	ENSMUSG00000031708.18	ENSMUST00000165740.9	1120	12	12	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACTGACTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84321101	84298332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300499_84300552_84301106_84301158_84320968
ENSMUSG00000031708.18_3	chr8	-	1321	12	FSM	ENSMUSG00000031708.18	ENSMUST00000238997.2	1334	12	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACTGACTGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84301462	84298332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84298565_84298641_84298688_84298860_84298950_84299026_84299085_84299177_84299222_84299309_84299383_84299469_84299576_84299656_84299773_84299848_84299953_84300039_84300085_84300499_84300552_84301106
ENSMUSG00000031711.8_0	chr8	-	1661	10	FSM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGAGTACTTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	83500782	83490256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508_83499641_83500685
ENSMUSG00000031711.8_2	chr8	-	1565	9	ISM	ENSMUSG00000031711.8	ENSMUST00000034147.4	1675	10	1148	7	1148	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGAGTACTTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	83499641	83490256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_83491121_83491483_83491602_83492640_83492688_83493297_83493403_83493841_83493969_83495948_83496029_83497429_83497501_83497967_83497988_83499508
ENSMUSG00000031712.11_1	chr8	-	744	5	FSM	ENSMUSG00000031712.11	ENST00000514653.5	761	5	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAAGAGAGGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83071093	83058392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_83058654_83061097_83061236_83064194_83064240_83069867_83070042_83070967
ENSMUSG00000031712.11_2	chr8	-	883	6	FSM	ENSMUSG00000031712.11	ENST00000477265.5	901	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGAAGAGAGGAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83072359	83058392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_83058654_83061097_83061236_83064194_83064240_83069867_83070042_83070967_83071102_83072228
ENSMUSG00000031714.10_0	chr8	-	4983	11	FSM	ENSMUSG00000031714.10	ENSMUST00000210676.2	4985	11	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGCTGTGTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	81607146	81491066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81502789_81502880_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ENSMUSG00000031714.10_1	chr8	-	4845	10	FSM	ENSMUSG00000031714.10	ENSMUST00000034150.10	4870	10	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGTGTGAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	81607105	81491073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81493117_81496279_81496403_81501178_81501303_81501562_81501657_81511255_81511560_81511729_81511816_81515118_81515724_81518017_81518244_81526729_81527025_81606160
ENSMUSG00000031715.15_0	chr8	-	6095	24	FSM	ENSMUSG00000031715.15	ENSMUST00000043359.9	6113	24	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGAACTTTTGGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	81466116	81425143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81427758_81428756_81428865_81431233_81431447_81431847_81431967_81432075_81432209_81435311_81435435_81435741_81435856_81436284_81436396_81437185_81437306_81438285_81438435_81440562_81440696_81443077_81443231_81444150_81444273_81446206_81446434_81447316_81447427_81450797_81450867_81452618_81452751_81452839_81452996_81454244_81454425_81455101_81455203_81456723_81456825_81460318_81460486_81463317_81463393_81465551
ENSMUSG00000031723.9_0	chr8	+	1874	4	FSM	ENSMUSG00000031723.9	ENSMUST00000034159.8	1890	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCAGCAGGGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	110292533	110300677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110292696_110295521_110295730_110298002_110298155_110299325
ENSMUSG00000031728.11_10	chr8	+	1796	7	FSM	ENSMUSG00000031728.11	ENST00000565601.5	1807	7	7	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGGAGCAGGCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	110432758	110451434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110433052_110436042_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_17	chr8	+	1782	6	FSM	ENSMUSG00000031728.11	ENST00000446827.6	1797	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTACTGGCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110432764	110451552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110433052_110436042_110436160_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_33	chr8	+	1495	5	FSM	ENSMUSG00000031728.11	ENST00000313565.10	1507	5	8	4	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCCCTGGCTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	110436048	110451558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110436160_110447826_110447976_110448385_110448491_110449518_110449686_110450595
ENSMUSG00000031728.11_39	chr8	+	1452	5	FSM	ENSMUSG00000031728.11	ENST00000611294.4	1466	5	10	4	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCCCCTGGCTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	110436050	110451558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110436160_110444393_110444520_110447826_110447976_110448385_110448491_110450595
ENSMUSG00000031729.7_0	chr8	-	2300	10	FSM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	110419888	110397956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307_110410411_110419815
ENSMUSG00000031729.7_1	chr8	-	2227	9	ISM	ENSMUSG00000031729.7	ENSMUST00000034164.6	2304	10	9482	0	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGTTGGTCAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	110410410	110397956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_110399274_110402007_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307
ENSMUSG00000031729.7_9	chr8	-	1256	9	FSM	ENSMUSG00000031729.7	ENST00000541571.6	1264	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTTCAGTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	110410404	110398925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110399274_110402003_110402057_110403389_110403483_110404117_110404319_110405486_110405598_110406055_110406140_110408738_110408827_110409229_110409411_110410307
ENSMUSG00000031730.19_0	chr8	-	2022	9	FSM	ENSMUSG00000031730.19	ENSMUST00000123605.9	2039	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAACAATGCTAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	110335247	110320117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110320764_110321251_110321412_110321547_110321702_110322278_110322393_110322661_110322850_110328054_110328138_110329934_110330135_110332839_110333053_110334983
ENSMUSG00000031731.17_0	chr8	+	3551	23	FSM	ENSMUSG00000031731.17	ENST00000393512.7	3570	23	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTGGACAGATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	110505164	110587472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556312_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031731.17_15	chr8	+	6852	23	FSM	ENSMUSG00000031731.17	ENSMUST00000034171.9	3692	23	-326	-2834	26	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTCAATGATTTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	110505211	110590824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110505595_110529578_110529783_110545549_110545675_110553225_110553368_110554869_110554967_110556230_110556308_110559348_110559445_110559821_110559903_110560099_110560199_110564374_110564431_110565550_110565665_110569984_110570126_110570956_110571012_110576252_110576376_110577672_110577763_110578331_110578460_110580173_110580279_110581297_110581440_110581614_110581742_110581977_110582086_110582204_110582366_110585430_110585530_110586725
ENSMUSG00000031732.13_0	chr8	+	7820	19	FSM	ENSMUSG00000031732.13	ENSMUST00000034175.5	7839	19	18	1	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGTGCTTTATGAATA	NA	NA	NA	NA	NA	NA	NA	NA	110595260	110671302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110595350_110603434_110603716_110622139_110622274_110630871_110631063_110634126_110634253_110635664_110635820_110638319_110638467_110638836_110639068_110640200_110640404_110646712_110646774_110649447_110649544_110652381_110652538_110655086_110655288_110659762_110659926_110660590_110660722_110661264_110661376_110662100_110662296_110663643_110663876_110666385
ENSMUSG00000031734.14_0	chr8	-	2740	4	FSM	ENSMUSG00000031734.14	ENSMUST00000175795.4	2748	4	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAACCGGCAGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	92528694	92525159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_92525605_92526038_92526106_92526300_92527427_92527592
ENSMUSG00000031736.12_0	chr8	-	760	4	FSM	ENSMUSG00000031736.12	ENSMUST00000179421.9	773	4	4	9	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTACATGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	93082455	93052669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_93053091_93073597_93073733_93077318_93077383_93082315
ENSMUSG00000031736.12_2	chr8	-	1228	7	FSM	ENSMUSG00000031736.12	ENSMUST00000034183.10	1238	7	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTACATGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	93082742	93052669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_93052895_93053014_93053091_93071480_93071668_93072977_93073092_93073411_93073547_93077318_93077383_93082315
ENSMUSG00000031737.12_1	chr8	+	2376	3	FSM	ENSMUSG00000031737.12	ENSMUST00000034184.12	2450	3	67	7	67	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAACTAGAGCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	93084443	93088077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93085058_93086164_93086571_93086721
ENSMUSG00000031737.12_2	chr8	+	2059	3	FSM	ENSMUSG00000031737.12	ENST00000320990.9	2071	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTGCAACTGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	93084819	93088139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93085058_93086164_93086571_93086724
ENSMUSG00000031740.9_0	chr8	+	3062	13	FSM	ENSMUSG00000031740.9	ENSMUST00000034187.9	3078	13	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGACAGTGTTTGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	93553927	93580041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93554406_93557248_93557476_93558312_93558462_93559391_93559521_93559696_93559871_93562596_93562771_93563533_93563708_93565880_93566037_93567017_93567160_93570447_93570585_93572708_93572869_93576753_93576864_93579189
ENSMUSG00000031748.17_0	chr8	+	2930	9	FSM	ENSMUSG00000031748.17	ENSMUST00000034198.15	2948	9	17	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTCTCACCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	94537482	94696015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94690011_94690166_94693495_94693712_94694659
ENSMUSG00000031748.17_1	chr8	+	3457	8	FSM	ENSMUSG00000031748.17	ENSMUST00000125716.8	3462	8	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGATAAAAAGAACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	94537470	94695582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94690011_94690166_94693495
ENSMUSG00000031748.17_2	chr8	+	5522	8	FSM	ENSMUSG00000031748.17	ENSMUST00000138659.9	5526	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGAGTGTGATGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	94537944	94687318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94538082_94538278_94538322_94622858_94623001_94670825_94670987_94676031_94676161_94676929_94677060_94680602_94680757_94682692
ENSMUSG00000031749.13_0	chr8	+	4377	7	FSM	ENSMUSG00000031749.13	ENSMUST00000034197.5	4396	7	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAACTAAATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111646561	111699101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111646738_111683389_111684683_111688800_111688995_111694048_111694229_111695819_111695866_111696175_111696296_111696733
ENSMUSG00000031750.16_0	chr8	-	1689	7	FSM	ENSMUSG00000031750.16	ENSMUST00000076846.11	1709	7	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTTGGCTTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	111532521	111468477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111469081_111469275_111469412_111474874_111475037_111475294_111475373_111476056_111476191_111481862_111482283_111532365
ENSMUSG00000031751.15_0	chr8	-	3866	14	FSM	ENSMUSG00000031751.15	ENSMUST00000053766.14	3880	14	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCACTGTTCTTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	94739463	94698222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_94699943_94700686_94700872_94701363_94701448_94702661_94702797_94706945_94707050_94709939_94710131_94711461_94711573_94711966_94712101_94714001_94714135_94714346_94714388_94725725_94725879_94726932_94727098_94731760_94731854_94738846
ENSMUSG00000031753.17_1	chr8	+	2387	18	FSM	ENSMUSG00000031753.17	ENST00000393612.8	2387	18	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCAAAGGTCCAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	111573672	111608579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031753.17_8	chr8	+	2725	19	FSM	ENSMUSG00000031753.17	ENSMUST00000034203.17	2737	19	7	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCCATTGTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	111573672	111608854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111573842_111576499_111576583_111577967_111578083_111578917_111579093_111580301_111580496_111584568_111584675_111585168_111585327_111586517_111586577_111589882_111590017_111592608_111592728_111593192_111593360_111594833_111595000_111600777_111600841_111605637_111605755_111606264_111606358_111607226_111607311_111607506_111607609_111608002_111608132_111608362
ENSMUSG00000031754.11_0	chr8	-	4991	7	FSM	ENSMUSG00000031754.11	ENSMUST00000034204.11	5010	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGAATGACTAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	94763649	94742132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_94746333_94749402_94749518_94751169_94751246_94755462_94755553_94757771_94757836_94758929_94759131_94763404
ENSMUSG00000031755.7_0	chr8	-	3056	17	FSM	ENSMUSG00000031755.7	ENSMUST00000034206.6	3064	17	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTTGTTTATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	94825548	94794581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_94795011_94796589_94796739_94800919_94801033_94801750_94801889_94803579_94803712_94806110_94806241_94807395_94807568_94807652_94807798_94808625_94808766_94808983_94809120_94813283_94813371_94813458_94813564_94814004_94814083_94815730_94815794_94816389_94816516_94819022_94819251_94824863
ENSMUSG00000031756.6_0	chr8	+	1760	12	FSM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGCATTATCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117648478	117668234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_117648523_117649066_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_14	chr8	+	782	8	FSM	ENSMUSG00000031756.6	ENST00000305850.10	794	8	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGATAAATGAATACATAT	NA	NA	NA	NA	NA	NA	NA	NA	117657823	117667644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662995_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_19	chr8	+	723	7	ISM	ENSMUSG00000031756.6	ENST00000305850.10	794	8	517	10	517	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGATAAATGAATACATAT	NA	NA	NA	NA	NA	NA	NA	NA	117658338	117667644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_117658410_117660025_117660203_117661433_117661536_117662932_117662995_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031756.6_7	chr8	+	1703	11	ISM	ENSMUSG00000031756.6	ENSMUST00000034205.5	1768	12	601	8	14	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACGCATTATCAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	117649079	117668234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_117649181_117652820_117653002_117655274_117655321_117657816_117657877_117658332_117658410_117660025_117660203_117661433_117661536_117662932_117662991_117663900_117664014_117667182_117667310_117667573
ENSMUSG00000031758.11_0	chr8	-	2060	7	FSM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGCGTGCGGTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	117459630	117301393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350518_117351106_117459536
ENSMUSG00000031758.11_1	chr8	-	1968	6	ISM	ENSMUSG00000031758.11	ENST00000563890.5	2073	7	108529	7	108529	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGAGCGTGCGGTAAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	117351107	117301393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_117302027_117305906_117306051_117309745_117309957_117315988_117316162_117321700_117321919_117350518
ENSMUSG00000031762.8_0	chr8	+	490	3	FSM	ENSMUSG00000031762.8	ENSMUST00000034214.8	511	3	12	9	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATTCAGCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	94899303	94900187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94899504_94899754_94899821_94899963
ENSMUSG00000031762.8_2	chr8	+	119	2	FSM	ENSMUSG00000031762.8	ENST00000569500.5	120	2	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGGGCGGAGGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	94899475	94900054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94899504_94899963
ENSMUSG00000031762.8_3	chr8	+	92	1	NIC	ENSMUSG00000031762.8	novel	511	3	NA	NA	475	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGGGGCGGAGGGGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	94899962	94900054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_94900000_94900100
ENSMUSG00000031765.9_0	chr8	+	532	3	FSM	ENSMUSG00000031765.9	ENSMUST00000034215.8	549	3	10	7	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAACTCTGGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94905719	94906948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94905967_94906450_94906517_94906729
ENSMUSG00000031766.5_0	chr8	+	3410	26	FSM	ENSMUSG00000031766.5	ENST00000563236.6	3424	26	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGACCATCCCTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	95055853	95092926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95056142_95057004_95057152_95058278_95058355_95059854_95059951_95060160_95060301_95060648_95060760_95061600_95061713_95061908_95062040_95066306_95066392_95067120_95067276_95067397_95067506_95067842_95067967_95069653_95069756_95070641_95070798_95071421_95071522_95072402_95072515_95072909_95073051_95075179_95075287_95076449_95076533_95077346_95077399_95078335_95078438_95079637_95079750_95082939_95083027_95083637_95083774_95085083_95085152_95092447
ENSMUSG00000031770.17_0	chr8	+	1937	8	FSM	ENSMUSG00000031770.17	ENSMUST00000161576.8	1952	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCCTGGCAAGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95113074	95121999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95113367_95115983_95116062_95116148_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_11	chr8	+	1742	7	FSM	ENSMUSG00000031770.17	ENST00000379792.6	1761	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATGACTGTAGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	95113169	95121974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95113367_95115983_95116062_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUSG00000031770.17_5	chr8	+	1856	8	FSM	ENSMUSG00000031770.17	ENSMUST00000034220.8	1873	8	12	5	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAGCAGAGACTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	95113134	95121981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95113367_95115983_95116062_95116151_95116224_95117345_95117477_95118359_95118483_95118801_95119153_95120423_95120530_95121218
ENSMUSG00000031772.18_0	chr8	+	3689	22	FSM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCAATGATCCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113343037	113608513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_113343141_113391738_113391933_113460044_113460193_113478819_113479024_113479564_113479750_113484025_113484288_113494091_113494242_113500198_113500371_113508154_113508262_113512407_113512528_113529681_113529880_113537216_113537374_113542111_113542240_113568336_113568508_113569149_113569369_113580622_113580863_113582924_113583150_113584790_113584925_113585738_113585827_113602045_113602265_113602587_113602660_113608320
ENSMUSG00000031772.18_13	chr8	+	3587	21	ISM	ENSMUSG00000031772.18	ENST00000478060.5	3698	22	48708	1	48708	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCAATGATCCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113391737	113608513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_113391933_113460044_113460193_113478819_113479024_113479564_113479750_113484025_113484288_113494091_113494242_113500198_113500371_113508154_113508262_113512407_113512528_113529681_113529880_113537216_113537374_113542111_113542240_113568336_113568508_113569149_113569369_113580622_113580863_113582924_113583150_113584790_113584925_113585738_113585827_113602045_113602265_113602587_113602660_113608320
ENSMUSG00000031774.9_0	chr8	-	2855	8	FSM	ENSMUSG00000031774.9	ENSMUST00000034226.8	2873	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTCTGCCTCTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95328613	95300771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95302486_95306027_95306093_95309511_95309643_95313951_95314074_95314630_95314730_95315403_95315542_95315938_95316036_95328124
ENSMUSG00000031776.18_0	chr8	+	2044	6	FSM	ENSMUSG00000031776.18	ENSMUST00000034228.16	2063	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATAATCACTTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	95393238	95401045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95393530_95394224_95394287_95396948_95397056_95397922_95398009_95398689_95398787_95399644
ENSMUSG00000031778.14_0	chr8	+	3299	3	FSM	ENSMUSG00000031778.14	ENSMUST00000034230.7	3315	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATCAGGGAACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95498645	95509048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95498963_95504655_95504777_95506187
ENSMUSG00000031781.15_0	chr8	-	4335	9	FSM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	7	17	7	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAATCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	95564979	95546448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564879
ENSMUSG00000031781.15_1	chr8	-	4237	8	ISM	ENSMUSG00000031781.15	ENSMUST00000162538.9	4359	9	5656	17	-788	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAAAAATCAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	95559330	95546448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142
ENSMUSG00000031781.15_11	chr8	-	1798	9	FSM	ENSMUSG00000031781.15	ENSMUST00000034233.15	1807	9	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCCTTTTACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	95564889	95549193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95549836_95550280_95550360_95551843_95551960_95553262_95553337_95554904_95555068_95555781_95555859_95558400_95558554_95559142_95559329_95564581
ENSMUSG00000031781.15_12	chr8	-	1150	6	FSM	ENSMUSG00000031781.15	ENST00000569370.5	1167	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACTTTTGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95558534	95549212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95549836_95550280_95550360_95553262_95553337_95554904_95555068_95555781_95555859_95558400
ENSMUSG00000031782.16_0	chr8	+	1771	9	FSM	ENSMUSG00000031782.16	ENSMUST00000034234.15	1789	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATTTCTTGTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95564960	95581517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576896_95577142_95577228_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031782.16_11	chr8	+	844	6	FSM	ENSMUSG00000031782.16	ENST00000567933.5	850	6	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTGTTTGAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	95565042	95581005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031782.16_15	chr8	+	1090	7	ISM	ENSMUSG00000031782.16	ENST00000567072.5	1180	8	4207	3	4203	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAGAATTGCTCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	95569244	95581105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031782.16_4	chr8	+	1171	8	FSM	ENSMUSG00000031782.16	ENST00000567072.5	1180	8	6	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAGAATTGCTCTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	95565043	95581105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95565126_95569245_95569397_95571404_95571541_95576752_95576876_95578478_95578584_95579742_95579899_95580232_95580287_95580741
ENSMUSG00000031783.11_0	chr8	+	1557	9	FSM	ENSMUSG00000031783.11	ENSMUST00000109521.4	1580	9	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3837	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTAGAAAATCAATTGC	NA	NA	NA	NA	NA	NA	NA	NA	95584088	95590858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95584270_95584374_95584425_95586871_95586941_95587071_95587125_95588338_95588468_95588809_95588862_95589148_95589318_95589437_95589513_95590079
ENSMUSG00000031785.17_0	chr8	+	3594	14	FSM	ENSMUSG00000031785.17	ENSMUST00000179619.9	3616	14	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTGGGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95703756	95740845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95704046_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUSG00000031785.17_2	chr8	+	3557	14	FSM	ENSMUSG00000031785.17	ENSMUST00000093271.8	3574	14	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGGAGAGTTGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	95711009	95740821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95711286_95729066_95729142_95729878_95730302_95731841_95731975_95732380_95732529_95732827_95732960_95733449_95733567_95733897_95733944_95734192_95734297_95734998_95735118_95736133_95736403_95737129_95737239_95738172_95738442_95739484
ENSMUSG00000031786.8_0	chr8	+	2352	16	ISM	ENSMUSG00000031786.8	ENSMUST00000058479.7	2832	18	1537	186	10	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCTTAATAGACTTCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	95783267	95804583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_95783404_95785022_95785149_95785652_95785848_95788340_95788500_95788804_95789024_95794676_95794809_95797030_95797104_95797868_95797998_95798170_95798300_95799369_95799591_95800743_95800960_95801620_95801732_95801831_95801943_95802877_95803073_95804300_95804441_95804523
ENSMUSG00000031787.9_0	chr8	+	3761	20	FSM	ENSMUSG00000031787.9	ENSMUST00000034239.9	3777	20	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGCTAGACTCCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	95807821	95826831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95807933_95809225_95809522_95813915_95814047_95816587_95816706_95820143_95820245_95820541_95820584_95821107_95821192_95821347_95821464_95821800_95821873_95821979_95822131_95822233_95822425_95822516_95822648_95822983_95823035_95823839_95823917_95824026_95824147_95824242_95824393_95824582_95824660_95824733_95824809_95824946_95825064_95825281
ENSMUSG00000031788.15_0	chr8	-	3264	20	FSM	ENSMUSG00000031788.15	ENSMUST00000034240.15	3277	20	7	6	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAGTGCAATCTGAATC	NA	NA	NA	NA	NA	NA	NA	NA	95869168	95826461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95827081_95827274_95827302_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542_95864748_95869059
ENSMUSG00000031788.15_10	chr8	-	2701	18	FSM	ENSMUSG00000031788.15	ENST00000541240.5	2710	18	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCAAGCATGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95864727	95826906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864542
ENSMUSG00000031788.15_13	chr8	-	2366	16	FSM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCTGGGCACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	95837391	95826917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321
ENSMUSG00000031788.15_14	chr8	-	2292	15	ISM	ENSMUSG00000031788.15	ENST00000562903.5	2369	16	497	0	155	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCTCTGGGCACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	95836897	95826917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757
ENSMUSG00000031788.15_4	chr8	-	2792	18	FSM	ENSMUSG00000031788.15	ENST00000421376.6	2802	18	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACCCAAGCATGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95864478	95826906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95827119_95828036_95828146_95828639_95828775_95828974_95829205_95829290_95829421_95830038_95830163_95830522_95830654_95832347_95832453_95833090_95833273_95834051_95834164_95834982_95835114_95835202_95835351_95835809_95835984_95836411_95836652_95836757_95836902_95837321_95837388_95861344_95861488_95864202
ENSMUSG00000031790.9_0	chr8	+	5085	10	FSM	ENSMUSG00000031790.9	ENSMUST00000034243.7	5135	10	30	20	30	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATCTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96078925	96101688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96079647_96091941_96092091_96092921_96093051_96094555_96094864_96095186_96095349_96096108_96096363_96096760_96096900_96097323_96097475_96097633_96097750_96098732
ENSMUSG00000031791.9_0	chr8	+	2106	6	FSM	ENSMUSG00000031791.9	ENSMUST00000034244.9	2124	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATCAAGCTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	73325926	73341118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73326072_73333406_73333564_73333803_73333989_73335028_73335117_73338543_73338662_73339705
ENSMUSG00000031792.16_0	chr8	+	1748	7	FSM	ENSMUSG00000031792.16	ENSMUST00000034245.16	1758	7	10	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTGTCTTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	96058921	96074135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96069749_96069804_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031792.16_3	chr8	+	802	6	FSM	ENSMUSG00000031792.16	ENST00000539737.6	821	6	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGAGCCTTGTCCCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	96058931	96073253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96059094_96059995_96060163_96065261_96065446_96070584_96070691_96071916_96072001_96073154
ENSMUSG00000031796.8_0	chr8	-	1284	6	FSM	ENSMUSG00000031796.8	ENSMUST00000034249.8	1295	6	8	3	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96161489	96146879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96147298_96147763_96147875_96148685_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031796.8_1	chr8	-	2538	4	FSM	ENSMUSG00000031796.8	ENSMUST00000213086.2	2544	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTATCTTTACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96161466	96146879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96148875_96149410_96149523_96151244_96151325_96161115
ENSMUSG00000031799.11_0	chr8	+	2138	8	FSM	ENSMUSG00000031799.11	ENSMUST00000003575.11	2158	8	10	10	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	19007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATGTGTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72889082	72906976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72889298_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031799.11_12	chr8	+	2028	8	FSM	ENSMUSG00000031799.11	ENSMUST00000238492.2	2044	8	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAATGTGTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	72889659	72906976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72889765_72892431_72892566_72897293_72897412_72898521_72898593_72900295_72900372_72900900_72900964_72901041_72901112_72905585
ENSMUSG00000031807.11_0	chr8	+	880	5	FSM	ENSMUSG00000031807.11	ENSMUST00000034264.11	893	5	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATTGTTTCTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	72044830	72048911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72045149_72046727_72046836_72047312_72047415_72047704_72047846_72048700
ENSMUSG00000031808.8_0	chr8	+	2714	13	FSM	ENSMUSG00000031808.8	ENSMUST00000212889.2	2730	13	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCGCCTGGCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72021538	72039346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72021668_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_26	chr8	+	2692	13	ISM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	415	6	415	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCGCCTGGCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72021985	72039346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_72022093_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031808.8_5	chr8	+	2782	14	FSM	ENSMUSG00000031808.8	ENSMUST00000034267.5	2795	14	7	6	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCGCCTGGCTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72021577	72039346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72021668_72021985_72022093_72023364_72023533_72032047_72032443_72032550_72032713_72032788_72032859_72033253_72033346_72033410_72033521_72036761_72036972_72037063_72037191_72037276_72037415_72037485_72037651_72037989_72038137_72038545
ENSMUSG00000031812.17_0	chr8	+	2510	4	FSM	ENSMUSG00000031812.17	ENSMUST00000034270.17	2532	4	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	7211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAACAGTCTAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	122317109	122325487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122317304_122320228_122320285_122322724_122322832_122323334
ENSMUSG00000031813.9_0	chr8	+	1043	9	FSM	ENSMUSG00000031813.9	ENSMUST00000034272.9	1062	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACTGTGTGGAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	71995586	72000664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71995702_71995776_71995876_71996030_71996128_71997867_71997995_71998190_71998311_71998393_71998501_71999616_71999679_72000221_72000279_72000405
ENSMUSG00000031816.16_12	chr8	-	1104	7	FSM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACCCCCAGCAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121833706	121825443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608
ENSMUSG00000031816.16_13	chr8	-	1008	6	ISM	ENSMUSG00000031816.16	ENST00000634347.1	1112	7	1286	0	1286	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACCCCCAGCAGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	121832428	121825443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312
ENSMUSG00000031816.16_4	chr8	-	1338	10	FSM	ENSMUSG00000031816.16	ENSMUST00000139782.8	1366	10	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTAAGCTGCTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121835028	121824302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121824665_121825446_121825511_121825737_121825892_121827857_121827984_121828162_121828276_121829652_121829744_121831130_121831245_121832312_121832427_121833608_121833713_121834932
ENSMUSG00000031818.13_0	chr8	+	730	5	FSM	ENSMUSG00000031818.13	ENSMUST00000034276.13	745	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGTGTCTGTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	121394969	121400940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121395095_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031818.13_1	chr8	+	749	5	FSM	ENSMUSG00000031818.13	ENSMUST00000181586.8	765	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTGGTGTCTGTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	121394970	121400940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121395115_121396047_121396122_121399463_121399632_121399959_121400092_121400709
ENSMUSG00000031819.14_0	chr8	-	4928	5	FSM	ENSMUSG00000031819.14	ENSMUST00000034277.14	4942	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTCCTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	121394852	121380658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121384988_121385266_121385362_121385743_121385814_121387522_121387600_121394495
ENSMUSG00000031819.14_2	chr8	-	725	2	FSM	ENSMUSG00000031819.14	ENSMUST00000181950.2	747	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTGAGAAGTGTACACG	NA	NA	NA	NA	NA	NA	NA	NA	121394811	121384578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121384988_121394495
ENSMUSG00000031820.10_0	chr8	+	1408	9	FSM	ENSMUSG00000031820.10	ENSMUST00000002473.10	1433	9	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAAACAAAGCAGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	71849517	71857251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71849665_71850322_71850670_71851035_71851095_71852169_71852291_71852372_71852452_71854323_71854349_71855389_71855520_71855619_71855707_71856838
ENSMUSG00000031821.12_0	chr8	-	3884	5	FSM	ENSMUSG00000031821.12	ENSMUST00000034278.6	3900	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATAGGTTCAGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	121316032	121305376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121308551_121308820_121308948_121312831_121312932_121315463_121315579_121315664
ENSMUSG00000031822.21_0	chr8	+	7101	16	FSM	ENSMUSG00000031822.21	ENSMUST00000034279.16	7127	16	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGAAATTCATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121215202	121308120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121215891_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUSG00000031822.21_3	chr8	+	4604	16	FSM	ENSMUSG00000031822.21	ENSMUST00000120493.8	4610	16	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTACTGCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121262601	121306219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121262694_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUSG00000031822.21_5	chr8	+	4483	16	FSM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTATTACTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	121264171	121306060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121264302_121280322_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUSG00000031822.21_6	chr8	+	4515	15	ISM	ENSMUSG00000031822.21	ENSMUST00000118136.2	4492	16	16152	-154	16152	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTGTACTGCTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121280319	121306219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_121280542_121289364_121289565_121293106_121293280_121293665_121293864_121294501_121294694_121294899_121295223_121295790_121296116_121297455_121298079_121299042_121299156_121299374_121299646_121300909_121301018_121301672_121302045_121303014_121303294_121304709_121304814_121305207
ENSMUSG00000031823.15_0	chr8	-	3048	8	FSM	ENSMUSG00000031823.15	ENSMUST00000034280.9	3069	8	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACACGAGCTGCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	120828209	120807637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120809456_120809968_120810100_120811582_120811665_120812083_120812181_120813367_120813493_120814492_120814824_120819655_120819741_120827830
ENSMUSG00000031824.16_0	chr8	+	5519	12	FSM	ENSMUSG00000031824.16	ENSMUST00000108951.8	5531	12	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAGTCAGATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	120840897	120892037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120841057_120871941_120872403_120876030_120876131_120876822_120876897_120878049_120878121_120879177_120879374_120880169_120880211_120880660_120880740_120883035_120883114_120886697_120886779_120887056_120887152_120887953
ENSMUSG00000031824.16_2	chr8	+	3124	13	FSM	ENSMUSG00000031824.16	ENSMUST00000108950.2	3125	13	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCTCTTGTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	120871667	120889626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120871813_120871941_120872403_120876030_120876131_120876822_120876897_120878049_120878121_120879177_120879374_120880169_120880211_120880660_120880740_120883035_120883114_120884206_120884237_120886697_120886779_120887056_120887152_120887953
ENSMUSG00000031826.21_0	chr8	+	3716	14	FSM	ENSMUSG00000031826.21	ENSMUST00000144458.8	3726	14	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAAGCTGTGTTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	120637107	120684293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667848_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_12	chr8	+	2645	15	FSM	ENSMUSG00000031826.21	ENST00000570191.5	2662	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGAGACTCCCTCTGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	120637581	120683592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120637679_120641835_120641943_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031826.21_8	chr8	+	3257	14	FSM	ENSMUSG00000031826.21	ENSMUST00000108988.9	3274	14	14	3	-5	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTGTGTTTCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120637566	120684296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120637679_120658587_120658657_120663269_120663328_120667851_120668878_120673813_120673906_120674439_120674550_120675156_120675213_120675417_120675522_120677097_120677198_120678659_120678838_120679918_120680085_120681527_120681673_120682936_120683003_120683321
ENSMUSG00000031827.14_0	chr8	-	1587	4	FSM	ENSMUSG00000031827.14	ENSMUST00000034285.14	1596	4	6	3	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAATGAGTTGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120567277	120535963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120537095_120549392_120549551_120566880_120566964_120567062
ENSMUSG00000031828.10_0	chr8	+	2156	5	FSM	ENSMUSG00000031828.10	ENSMUST00000034287.10	2181	5	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATTATCTTGTTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	120589028	120603727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120589187_120591741_120591819_120596360_120597432_120601113_120601272_120603035
ENSMUSG00000031832.16_0	chr8	-	3227	15	FSM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGTCTGGTGTGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	120331958	120324719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978_120331118_120331873
ENSMUSG00000031832.16_4	chr8	-	3131	14	ISM	ENSMUSG00000031832.16	ENSMUST00000093099.13	3236	15	852	9	852	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGATGTGTCTGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	120331109	120324722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_120326243_120326319_120326458_120326554_120326730_120327172_120327311_120327399_120327536_120327689_120327762_120327849_120327968_120328054_120328172_120328280_120328520_120329569_120329644_120329728_120329819_120329888_120329987_120330119_120330205_120330978
ENSMUSG00000031833.11_0	chr8	-	5297	27	FSM	ENSMUSG00000031833.11	ENSMUST00000166004.3	5305	27	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGATACTGGTGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	71249630	71230766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356_71249447_71249543
ENSMUSG00000031833.11_1	chr8	-	5215	26	ISM	ENSMUSG00000031833.11	ENSMUST00000166004.3	5305	27	186	1	186	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTGGTGTGTGCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71249446	71230761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_71232582_71232916_71233099_71233183_71233321_71233512_71233636_71233791_71234019_71234155_71234369_71234543_71234786_71236108_71236243_71236343_71236454_71236786_71236910_71237157_71237260_71237371_71237538_71238004_71238138_71238800_71238940_71239213_71239423_71239499_71239586_71239950_71240010_71240305_71240439_71240511_71240614_71240773_71240984_71241370_71241447_71241522_71241681_71241849_71241929_71242491_71242565_71242640_71242730_71249356
ENSMUSG00000031834.16_0	chr8	-	3158	16	FSM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	71229350	71220819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299_71227997_71229250
ENSMUSG00000031834.16_1	chr8	-	3059	15	ISM	ENSMUSG00000031834.16	ENSMUST00000034296.15	3165	16	1360	0	1360	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTCTTTGGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	71227997	71220819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_71221542_71221705_71221877_71221991_71222064_71222232_71222410_71222548_71222692_71223020_71223147_71223227_71223409_71223490_71223590_71223697_71223807_71223932_71224019_71224476_71224676_71224776_71224909_71224995_71225047_71225246_71225340_71227299
ENSMUSG00000031835.17_0	chr8	-	4325	24	FSM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTTACAAAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120285463	120234902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296_120276446_120285384
ENSMUSG00000031835.17_1	chr8	-	4250	23	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	9019	6	9019	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTACAAAGCTGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	120276447	120234900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120276296
ENSMUSG00000031835.17_2	chr8	-	4179	23	FSM	ENSMUSG00000031835.17	ENSMUST00000081381.6	4195	23	8	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTTACAAAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120285466	120234902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138_120274625_120285384
ENSMUSG00000031835.17_5	chr8	-	4098	22	ISM	ENSMUSG00000031835.17	ENSMUST00000098362.11	4336	24	10841	8	10841	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCTTACAAAGCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	120274625	120234902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_120235715_120236992_120237124_120240612_120240740_120242316_120242449_120244877_120245019_120247010_120247089_120247736_120247862_120248493_120248651_120249217_120249334_120251165_120251339_120252106_120252296_120255662_120255808_120257787_120257950_120260059_120260212_120262013_120262117_120264865_120264934_120265582_120265700_120268323_120268434_120268813_120268925_120269463_120269668_120272722_120272981_120274138
ENSMUSG00000031837.15_0	chr8	+	992	10	FSM	ENSMUSG00000031837.15	ENST00000565691.5	1004	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGAGGGCCGGGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	120176731	120198568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120176846_120178820_120178930_120181097_120181196_120189299_120189437_120191640_120191760_120191891_120191972_120194329_120194384_120195007_120195121_120197646_120197725_120198478
ENSMUSG00000031838.11_0	chr8	-	963	7	FSM	ENSMUSG00000031838.11	ENSMUST00000222087.4	980	7	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTTTTTCCTAGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71219290	71215418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71215686_71215772_71215827_71216371_71216525_71217191_71217285_71217363_71217439_71217563_71217747_71219152
ENSMUSG00000031839.8_0	chr8	+	1185	4	FSM	ENSMUSG00000031839.8	ENSMUST00000034300.8	1208	4	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2925	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGTAATTAAACATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	120071236	120075648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120071360_120071674_120071742_120072351_120072473_120074774
ENSMUSG00000031840.15_0	chr8	+	1425	5	FSM	ENSMUSG00000031840.15	ENSMUST00000110093.9	1442	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCCGCACCCTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	71207338	71211317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71207518_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031840.15_1	chr8	+	1088	4	FSM	ENSMUSG00000031840.15	ENST00000464076.3	1108	4	12	8	-3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGACCTTGCTGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	71207369	71211239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71207518_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031840.15_2	chr8	+	1341	5	FSM	ENSMUSG00000031840.15	ENSMUST00000034301.12	1363	5	15	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACCCACACGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	71207374	71211274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71207513_71208502_71208731_71209093_71209213_71209783_71209909_71210543
ENSMUSG00000031841.20_0	chr8	+	3622	13	ISM	ENSMUSG00000031841.20	ENSMUST00000117160.2	3785	14	221868	0	-169417	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCTGGGCAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	119232339	120051660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_119232455_119401756_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040934_120050133
ENSMUSG00000031841.20_1	chr8	+	3537	12	FSM	ENSMUSG00000031841.20	ENST00000567109.6	3546	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGTCTGACGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	119401765	120051704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040929_120050133
ENSMUSG00000031841.20_8	chr8	+	3785	14	NNC	ENSMUSG00000031841.20	novel	3785	14	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGCTGGGCAGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	119010476	120051660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_+_119010640_119232339_119232455_119401756_119401966_119484106_119484224_119578457_119578611_119694787_119694933_119821923_119822103_119925593_119925735_119963522_119963706_119968928_119969183_120015324_120015468_120039240_120039475_120040711_120040934_120050133
ENSMUSG00000031842.16_0	chr8	+	1947	14	FSM	ENSMUSG00000031842.16	ENST00000355502.7	1959	14	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	2176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCTGCTTTGTCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	71182808	71202786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71182934_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031842.16_12	chr8	+	1924	14	FSM	ENSMUSG00000031842.16	ENST00000262805.16	1937	14	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCTGCTTTGTCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	71195796	71202786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71195899_71197922_71198115_71198515_71198553_71198636_71198698_71199138_71199294_71199435_71199530_71199868_71200030_71200115_71200215_71200463_71200629_71200705_71200806_71201016_71201172_71201559_71201683_71201871_71202055_71202489
ENSMUSG00000031843.3_0	chr8	-	1065	5	FSM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118528679	118518383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782_118525896_118528590
ENSMUSG00000031843.3_1	chr8	-	978	4	ISM	ENSMUSG00000031843.3	ENSMUST00000034303.3	1068	5	2785	0	2785	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTTGAAGTAATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	118525897	118518383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_118519058_118519417_118519516_118521319_118521411_118525782
ENSMUSG00000031844.9_0	chr8	+	1174	5	FSM	ENSMUSG00000031844.9	ENST00000199936.9	1185	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCAGCCTACTGCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	118428614	118485588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_118429003_118461232_118461446_118469070_118469261_118479924_118480063_118485343
ENSMUSG00000031847.9_0	chr8	-	1449	3	FSM	ENSMUSG00000031847.9	ENSMUST00000213068.2	1482	3	28	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTGCTGCCTGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	117705670	117697851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117698896_117700190_117700439_117705513
ENSMUSG00000031848.16_0	chr8	+	904	5	FSM	ENSMUSG00000031848.16	ENSMUST00000034311.15	925	5	9	12	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAGAAAGAGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	71125906	71131390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71126108_71129204_71129247_71130427_71130527_71130603_71130785_71131009
ENSMUSG00000031851.15_0	chr8	+	1142	5	FSM	ENSMUSG00000031851.15	ENSMUST00000034313.13	1155	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGACACAGGAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	126460947	126474967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126471974_126472185_126474436
ENSMUSG00000031851.15_1	chr8	+	1476	4	FSM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCCATGTCTAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	126460993	126465914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_126461089_126462806_126462970_126464061_126464159_126464793
ENSMUSG00000031851.15_2	chr8	+	1377	3	ISM	ENSMUSG00000031851.15	ENSMUST00000065135.12	1497	4	1827	11	230	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCTAAAAGCCCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	126462803	126465907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_126462970_126464061_126464159_126464793
ENSMUSG00000031853.6_0	chr8	+	2244	10	FSM	ENSMUSG00000031853.6	ENST00000366624.8	2257	10	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGATTCTCTTTGATCCAG	NA	NA	NA	NA	NA	NA	NA	NA	126637505	126761263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_126638173_126650756_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944_126664068_126665439_126665591_126666587_126666686_126668291_126668730_126761243
ENSMUSG00000031853.6_1	chr8	+	2225	9	ISM	ENSMUSG00000031853.6	ENSMUST00000034316.6	5693	10	316	5450	11	-5450	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCCAAGCCATTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	126637504	126668729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_126638173_126650756_126650938_126652813_126652963_126654269_126654446_126661667_126661909_126663944_126664068_126665439_126665591_126666587_126666686_126668291
ENSMUSG00000031858.17_0	chr8	-	5286	18	NNC	ENSMUSG00000031858.17	novel	5323	19	NA	NA	13	-10	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAATAATTAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70495322	70468782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70495037
ENSMUSG00000031858.17_1	chr8	-	5345	19	FSM	ENSMUSG00000031858.17	ENSMUST00000050561.13	5369	19	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAATAATTAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70495370	70468782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476263_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUSG00000031858.17_7	chr8	-	2850	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212308.2	2887	19	31	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCATCTGTCCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	70495319	70471222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70472304_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUSG00000031858.17_8	chr8	-	1925	19	FSM	ENSMUSG00000031858.17	ENSMUST00000212451.2	1931	19	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAACACTGGAGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	70495380	70472215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70472311_70472396_70472525_70473069_70473161_70474785_70474898_70475005_70475084_70475269_70475320_70476260_70476348_70478477_70478544_70478823_70478902_70479322_70479427_70480114_70480206_70480271_70480419_70481268_70481425_70481857_70481886_70483291_70483387_70484112_70484209_70485828_70485895_70486260_70486279_70495041
ENSMUSG00000031860.18_0	chr8	+	1556	8	FSM	ENSMUSG00000031860.18	ENSMUST00000081503.13	1560	8	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTGTTTTCAATACA	NA	NA	NA	NA	NA	NA	NA	NA	70285143	70324941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70285502_70311729_70311804_70316961_70317201_70317473_70317665_70319117_70319254_70322678_70322833_70323227_70323335_70324644
ENSMUSG00000031861.17_0	chr8	+	5810	3	FSM	ENSMUSG00000031861.17	ENSMUST00000034325.6	5837	3	16	11	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACTGGACTTGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	70275094	70283741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70275362_70276203_70276946_70278940
ENSMUSG00000031862.12_0	chr8	+	3888	26	FSM	ENSMUSG00000031862.12	ENSMUST00000034326.7	3915	26	16	11	16	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATAAAGCTTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	70243828	70260388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70244292_70246398_70246489_70246579_70246771_70249228_70249302_70249479_70249636_70249731_70249802_70249874_70249982_70250356_70250487_70250590_70250647_70251036_70251164_70251233_70251372_70251461_70251583_70251970_70252129_70252411_70252588_70252661_70252773_70253551_70253678_70254683_70254793_70256109_70256310_70256389_70256487_70257869_70258028_70258097_70258213_70258295_70258493_70259410_70259554_70259646_70259759_70259841_70259986_70260068
ENSMUSG00000031864.17_0	chr8	+	4187	17	FSM	ENSMUSG00000031864.17	ENSMUST00000034328.13	4201	17	7	7	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTATTTCAGGCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	69246587	69282055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_69246801_69247262_69247331_69249368_69249473_69250410_69250551_69254967_69255050_69255534_69255676_69257465_69257638_69260113_69260284_69261027_69261162_69263230_69263385_69264562_69264646_69266217_69266371_69266908_69267018_69271939_69272020_69273306_69273470_69274808_69274903_69279928
ENSMUSG00000031865.17_0	chr6	+	4116	28	FSM	ENSMUSG00000031865.17	ENSMUST00000077407.12	4118	28	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83142903	83177098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83142977_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_34	chr6	+	4007	28	FSM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCACTCCTTCCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	83156616	83176791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83156888_83159505_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_70	chr6	+	4044	27	ISM	ENSMUSG00000031865.17	ENST00000409567.7	4022	28	2901	-305	2901	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83159504	83177098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_83159752_83160040_83160120_83160280_83160316_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031865.17_85	chr6	+	4196	26	FSM	ENSMUSG00000031865.17	ENSMUST00000113907.2	4205	26	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGTCTGTGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83162935	83177098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83163428_83164745_83164767_83166058_83166251_83166529_83166728_83166882_83167088_83167184_83167264_83167402_83167563_83167674_83167780_83167950_83168143_83168226_83168344_83168547_83168701_83169441_83169603_83169715_83169885_83170688_83170758_83170940_83171004_83171101_83171252_83171411_83171574_83171655_83171788_83171969_83172096_83172529_83172673_83172922_83173090_83174472_83174607_83174737_83174931_83175563_83175644_83176169_83176260_83176655
ENSMUSG00000031870.17_0	chr9	+	2455	7	FSM	ENSMUSG00000031870.17	ENST00000263463.9	2475	7	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGTGATGACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8900477	8965128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_8902085_8903596_8903749_8922599_8922717_8956244_8956390_8958330_8958462_8961396_8961555_8964983
ENSMUSG00000031875.8_1	chr8	+	1599	5	FSM	ENSMUSG00000031875.8	ENSMUST00000034343.5	1616	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTACATGCTTGGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	105067234	105074296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105067528_105070389_105070546_105071408_105071505_105071903_105072025_105073363
ENSMUSG00000031877.10_0	chr8	+	2821	12	FSM	ENSMUSG00000031877.10	ENSMUST00000043183.8	2859	12	27	11	27	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAATCTATCTATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	105688376	105696158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105688496_105689101_105689313_105690507_105690647_105691291_105691426_105691506_105691766_105692520_105692620_105692881_105693023_105693143_105693225_105693460_105693606_105693950_105694089_105694391_105694465_105694876
ENSMUSG00000031878.19_0	chr8	-	1731	19	FSM	ENSMUSG00000031878.19	ENSMUST00000162466.8	1735	19	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATAGTCTTGTTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	105261266	105237661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031878.19_1	chr8	-	1789	20	FSM	ENSMUSG00000031878.19	ENSMUST00000034349.10	1808	20	11	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTAATATAGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	105261258	105237667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105237900_105239831_105239882_105239972_105240088_105242760_105242854_105243279_105243367_105244538_105244579_105244819_105244896_105246176_105246311_105246395_105246456_105249278_105249371_105249793_105249858_105250207_105250271_105250966_105251077_105252911_105253022_105253714_105253795_105254009_105254082_105254818_105254850_105256687_105256749_105257024_105257129_105261143
ENSMUSG00000031879.15_0	chr8	-	902	5	FSM	ENSMUSG00000031879.15	ENSMUST00000164884.9	918	5	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTATGCCTTAGCGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	105368585	105366473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105366719_105367151_105367198_105367599_105367726_105367942_105368023_105368180
ENSMUSG00000031880.8_0	chr8	-	1555	5	FSM	ENSMUSG00000031880.8	ENSMUST00000034351.8	1577	5	18	4	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCAGGACTGTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	105357941	105354705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105355361_105356152_105356358_105356457_105356532_105357178_105357613_105357754
ENSMUSG00000031881.7_0	chr8	-	2398	15	FSM	ENSMUSG00000031881.7	ENST00000568632.5	2408	15	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGTAAAGAATGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	105349771	105340779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105341114_105341765_105341883_105342643_105342752_105342896_105343140_105343564_105343699_105344256_105344499_105344575_105344765_105344838_105344916_105344999_105345228_105345531_105345683_105345860_105345984_105346506_105346630_105348654_105348736_105348804_105348961_105349679
ENSMUSG00000031881.7_1	chr8	-	2308	14	ISM	ENSMUSG00000031881.7	ENST00000568632.5	2408	15	814	5	814	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTGTAAAGAATGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	105348962	105340779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_105341114_105341765_105341883_105342643_105342752_105342896_105343140_105343564_105343699_105344256_105344499_105344575_105344765_105344838_105344916_105344999_105345228_105345531_105345683_105345860_105345984_105346506_105346630_105348654_105348736_105348804
ENSMUSG00000031885.15_0	chr8	+	2850	6	FSM	ENSMUSG00000031885.15	ENSMUST00000052209.9	2883	6	21	12	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACAAAGTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	105897326	105944609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929180_105942535
ENSMUSG00000031885.15_1	chr8	+	2883	6	FSM	ENSMUSG00000031885.15	ENSMUST00000109392.9	2891	6	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACAAAGTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	105897324	105944609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105929083_105929211_105942535
ENSMUSG00000031885.15_10	chr8	+	2483	5	FSM	ENSMUSG00000031885.15	ENSMUST00000109394.3	2487	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACAAAGTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	105897576	105944609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105897686_105897937_105898025_105921106_105921224_105929083_105929180_105942535
ENSMUSG00000031885.15_9	chr8	+	2702	5	FSM	ENSMUSG00000031885.15	ENSMUST00000109395.8	2709	5	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGAAAACAAAGTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	105897378	105944609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105897686_105897937_105898025_105905224_105905342_105921106_105921224_105942535
ENSMUSG00000031887.14_0	chr8	-	1682	5	FSM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGTGGTGGTGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	105991241	105984924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153_105987313_105991192
ENSMUSG00000031887.14_1	chr8	-	1623	4	ISM	ENSMUSG00000031887.14	ENSMUST00000034359.10	1689	5	3939	7	3939	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAGGTGGTGGTGCACGC	NA	NA	NA	NA	NA	NA	NA	NA	105987302	105984924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_105985928_105986068_105986262_105986341_105986620_105987153
ENSMUSG00000031889.10_0	chr8	+	2897	16	FSM	ENSMUSG00000031889.10	ENSMUST00000034361.10	2916	16	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGTGAGCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	105951788	105979678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105952119_105957759_105957843_105961113_105961198_105965054_105965099_105966302_105966383_105966609_105966705_105967472_105967571_105967658_105967772_105973052_105973187_105973469_105973554_105974727_105974811_105975374_105975419_105976050_105976095_105976228_105976288_105977350_105977424_105978229
ENSMUSG00000031893.8_0	chr8	+	1721	13	FSM	ENSMUSG00000031893.8	ENST00000388833.7	1736	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCTAGACCTGGATCCG	NA	NA	NA	NA	NA	NA	NA	NA	106563791	106570830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106563891_106564037_106564165_106565338_106565433_106566622_106566820_106567189_106567326_106568025_106568196_106568277_106568450_106568522_106568645_106568763_106568890_106569028_106569182_106569304_106569415_106570522_106570650_106570742
ENSMUSG00000031897.10_0	chr8	-	1292	8	FSM	ENSMUSG00000031897.10	ENSMUST00000034369.10	1311	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACACAAACACTTAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	106665066	106662379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106662538_106662627_106662780_106663327_106663387_106663497_106663614_106663872_106664014_106664125_106664224_106664310_106664399_106664586
ENSMUSG00000031901.13_0	chr8	+	1852	16	FSM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGGCCACCTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106738142	106780447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106738211_106742455_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUSG00000031901.13_7	chr8	+	1782	15	ISM	ENSMUSG00000031901.13	ENSMUST00000034375.11	1860	16	4319	4	4319	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGGCCACCTGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106742457	106780447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_106742598_106752537_106752584_106756983_106757076_106758329_106758374_106760354_106760416_106762609_106762658_106768455_106768522_106768657_106768729_106771429_106771517_106772532_106772702_106775284_106775407_106776948_106777099_106778433_106778522_106779637_106779712_106779923
ENSMUSG00000031902.11_0	chr8	+	5959	10	FSM	ENSMUSG00000031902.11	ENSMUST00000109308.3	5984	10	15	10	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACAGTCTCCTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106786279	106857159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854549
ENSMUSG00000031902.11_1	chr8	+	5956	10	FSM	ENSMUSG00000031902.11	ENST00000349223.9	5982	10	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACAGTCTCCTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	106786343	106857159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106786626_106805235_106806374_106810442_106810606_106818663_106818864_106822795_106822969_106825703_106825845_106827565_106827622_106830656_106830784_106834756_106835762_106854488
ENSMUSG00000031903.8_0	chr8	+	2572	6	FSM	ENSMUSG00000031903.8	ENSMUST00000212963.2	2578	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGTAAGGTGCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	106877030	106891338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887840_106887941_106889456
ENSMUSG00000031903.8_1	chr8	+	2687	6	FSM	ENSMUSG00000031903.8	ENSMUST00000034377.8	2706	6	17	2	17	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGCCTTGTCCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106877047	106891345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106877246_106881499_106881657_106886794_106886914_106887212_106887312_106887715_106887941_106889456
ENSMUSG00000031904.6_0	chr8	+	3736	10	FSM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAATCACAGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106895495	106925331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106895587_106905733_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ENSMUSG00000031904.6_5	chr8	+	3647	9	ISM	ENSMUSG00000031904.6	ENSMUST00000034378.5	3750	10	10243	7	10243	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTAATCACAGTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	106905731	106925331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_106906293_106916248_106916375_106918970_106919116_106919782_106919907_106920124_106920229_106921052_106921150_106921993_106922144_106922484_106922669_106923175
ENSMUSG00000031907.10_0	chr8	+	2599	4	FSM	ENSMUSG00000031907.10	ENSMUST00000034382.8	2632	4	14	19	5	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAGAAAGAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	107141984	107152502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107142403_107145702_107145830_107146146_107146243_107150544
ENSMUSG00000031907.10_1	chr8	+	2179	5	FSM	ENSMUSG00000031907.10	ENSMUST00000212874.2	2195	5	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTATTACAGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107142038	107152353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107142119_107142335_107142403_107145702_107145830_107146146_107146243_107150544
ENSMUSG00000031913.10_0	chr8	+	2161	11	FSM	ENSMUSG00000031913.10	ENSMUST00000034388.10	2178	11	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTACTGGAGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	107757866	107772383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107758124_107763268_107763381_107763474_107763623_107765559_107765622_107765721_107765842_107767505_107767663_107768823_107768973_107769245_107769328_107769543_107769764_107771086_107771228_107771670
ENSMUSG00000031916.18_0	chr8	-	4444	5	FSM	ENSMUSG00000031916.18	ENSMUST00000095517.12	4476	5	14	18	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCTAAAGAACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	107783307	107772938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ENSMUSG00000031916.18_1	chr8	-	2907	6	FSM	ENSMUSG00000031916.18	ENSMUST00000034391.4	2954	6	32	15	32	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATCTAAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	107783284	107772941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107773904_107775414_107775763_107776773_107776943_107778844_107779673_107780653_107780862_107782892
ENSMUSG00000031917.13_0	chr8	+	3015	5	FSM	ENSMUSG00000031917.13	ENSMUST00000034392.13	3036	5	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCCAAAAAGTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107783517	107787551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107783623_107783724_107783812_107783904_107784044_107784678_107784820_107785008
ENSMUSG00000031918.17_0	chr9	+	3771	15	FSM	ENSMUSG00000031918.17	ENSMUST00000034396.14	3788	15	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCCTTGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	13659714	13717769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13660697_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_12	chr9	+	2273	16	FSM	ENSMUSG00000031918.17	ENST00000481642.6	2283	16	8	2	-1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGGACTAGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	13660475	13716828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13660697_13671713_13671785_13693572_13693812_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_17	chr9	+	2421	16	FSM	ENSMUSG00000031918.17	ENST00000393223.8	2438	16	8	9	-1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGTTTTTCATTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13660475	13717088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13660697_13671692_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_20	chr9	+	2472	16	FSM	ENSMUSG00000031918.17	ENST00000675362.1	2485	16	7	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTCATTTAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	13660474	13717091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13660697_13671692_13671785_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_37	chr9	+	3071	16	FSM	ENSMUSG00000031918.17	ENSMUST00000155679.8	3088	16	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCCTTGTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	13660485	13717769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13660697_13671713_13671785_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_61	chr9	+	2229	15	FSM	ENSMUSG00000031918.17	ENST00000675196.1	2237	15	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTCATTTAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	13671713	13717091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13671785_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_72	chr9	+	2346	15	FSM	ENSMUSG00000031918.17	ENST00000674528.1	2362	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTCATTTAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	13677129	13717091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13677318_13693572_13693683_13697104_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031918.17_76	chr9	+	2300	15	FSM	ENSMUSG00000031918.17	ENST00000675636.1	2315	15	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTTTTCATTTAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	13677128	13717091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13677318_13693572_13693679_13697147_13697224_13699876_13699972_13700335_13700447_13703274_13703377_13704444_13704529_13706532_13706683_13707253_13707443_13710445_13710632_13711171_13711379_13713210_13713304_13714720_13714835_13716101_13716279_13716670
ENSMUSG00000031921.18_0	chr8	-	2653	10	FSM	ENSMUSG00000031921.18	ENSMUST00000068421.13	2667	10	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTCTCTAGCTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107823163	107796033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107797198_107798506_107798548_107799191_107799278_107803241_107803632_107806000_107806102_107807724_107807872_107809614_107809702_107821453_107821585_107822560_107822657_107822753
ENSMUSG00000031922.13_0	chr9	-	2508	11	FSM	ENSMUSG00000031922.13	ENSMUST00000034398.12	2523	11	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	13738393	13719094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUSG00000031922.13_1	chr9	-	2446	11	FSM	ENSMUSG00000031922.13	ENSMUST00000148086.8	2467	11	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGCCAGCTAACAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	13738331	13719094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13723928_13724007_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732970_13738141
ENSMUSG00000031922.13_5	chr9	-	2248	10	FSM	ENSMUSG00000031922.13	ENSMUST00000147115.8	2262	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATAAAGCAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13738242	13719125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_13720137_13721155_13721301_13721922_13722159_13724705_13724817_13727350_13727429_13728182_13728300_13729618_13729741_13730154_13730335_13732822_13732980_13738151
ENSMUSG00000031924.5_0	chr8	+	4304	5	FSM	ENSMUSG00000031924.5	ENSMUST00000034400.5	4316	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTACGGTTGCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107877282	107914102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107877506_107896442_107896572_107897022_107897053_107906045_107906075_107910209
ENSMUSG00000031924.5_3	chr8	+	808	3	FSM	ENSMUSG00000031924.5	ENST00000515314.6	819	3	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAATTTTGTCATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	107877349	107910732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107877506_107896442_107896572_107910209
ENSMUSG00000031925.18_2	chr9	+	6381	5	NNC	ENSMUSG00000031925.18	novel	6404	5	NA	NA	14	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAGTTTAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	13298319	13620674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_13298911_13531284_13532972_13608469_13608674_13613539_13613652_13616887
ENSMUSG00000031927.10_0	chr9	-	665	4	FSM	ENSMUSG00000031927.10	ENSMUST00000060330.5	688	4	9	14	-8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTATCAAACAAAAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	14682317	14669500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14669752_14672900_14673027_14678152_14678258_14682134
ENSMUSG00000031927.10_1	chr9	-	621	4	FSM	ENSMUSG00000031927.10	ENSMUST00000191047.7	654	4	17	16	17	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTATCAAACAAAAATCAC	NA	NA	NA	NA	NA	NA	NA	NA	14682292	14669502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14669752_14672917_14673027_14678152_14678258_14682134
ENSMUSG00000031928.16_0	chr9	+	3271	20	FSM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAGATAAATAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	14695958	14745936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_2	chr9	+	5658	19	FSM	ENSMUSG00000031928.16	ENSMUST00000115632.10	5660	19	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAACGTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	14695973	14748419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_14696054_14696726_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_8	chr9	+	3178	19	ISM	ENSMUSG00000031928.16	ENSMUST00000034405.11	3286	20	775	6	753	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAGATAAATAATCTCA	NA	NA	NA	NA	NA	NA	NA	NA	14696724	14745936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14721099_14721181_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031928.16_9	chr9	+	5574	18	ISM	ENSMUSG00000031928.16	ENSMUST00000115632.10	5660	19	759	0	759	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGAACGTTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	14696730	14748419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_14696825_14698173_14698307_14701868_14702030_14707066_14707155_14708338_14708481_14710851_14710967_14714059_14714246_14716651_14716824_14723125_14723253_14726463_14726568_14728091_14728266_14730711_14730775_14736436_14736654_14737830_14737912_14740652_14740712_14742192_14742258_14743936_14744013_14744902
ENSMUSG00000031930.12_0	chr8	+	4304	24	FSM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCCATGGGTGGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	108162998	108285219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031930.12_10	chr8	+	1984	15	FSM	ENSMUSG00000031930.12	ENSMUST00000212543.2	1996	15	6	6	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	108271649	108283839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108271979_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031930.12_6	chr8	+	2752	23	FSM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	108163032	108283839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108163074_108179610_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031930.12_7	chr8	+	4230	23	ISM	ENSMUSG00000031930.12	ENSMUST00000166615.3	4314	24	16616	5	16581	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGGGTGGTGTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	108179612	108285222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_108179696_108184074_108184223_108184511_108184634_108209963_108210102_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031930.12_8	chr8	+	2715	22	ISM	ENSMUSG00000031930.12	ENSMUST00000212205.2	2758	23	16575	5	16575	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTATTACCTGTTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	108179606	108283839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_108179696_108184074_108184223_108184511_108184634_108212177_108212275_108232938_108233067_108244532_108244744_108259831_108259922_108267255_108267431_108272075_108272131_108275100_108275183_108275660_108275790_108276091_108276168_108276412_108276485_108276678_108276768_108278908_108279069_108280600_108280735_108281064_108281206_108281612_108281734_108282045_108282151_108283092_108283190_108283343_108283417_108283518
ENSMUSG00000031931.5_0	chr9	-	2650	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216372.2	2679	3	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGTAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	14696143	14690933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14692908_14693910_14694259_14695815
ENSMUSG00000031931.5_2	chr9	-	3197	2	FSM	ENSMUSG00000031931.5	ENSMUST00000214456.2	3207	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGCCAAGAACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	14695846	14691092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14694259_14695815
ENSMUSG00000031931.5_3	chr9	-	3137	1	NIC	ENSMUSG00000031931.5	novel	2679	3	NA	NA	21	-20	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGAGAAAACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	14694239	14691102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_14691100_14694200
ENSMUSG00000031931.5_4	chr9	-	1733	2	FSM	ENSMUSG00000031931.5	ENSMUST00000034406.4	1753	2	3	17	3	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACCAAACAAACAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	14694257	14691521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14692908_14693910
ENSMUSG00000031931.5_5	chr9	-	1027	3	FSM	ENSMUSG00000031931.5	ENSMUST00000216037.2	1037	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTATTTGAGAGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	14695822	14692294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14692908_14693910_14694259_14695756
ENSMUSG00000031934.15_0	chr9	-	5711	5	FSM	ENSMUSG00000031934.15	ENSMUST00000164273.9	5732	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACAAAGAGAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	14956763	14913433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14917514_14918656_14919316_14921331_14921553_14932677_14932818_14956152
ENSMUSG00000031935.10_0	chr9	-	3948	12	FSM	ENSMUSG00000031935.10	ENSMUST00000034411.10	3964	12	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTGCTGGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	15191219	15171654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15173735_15174899_15175060_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUSG00000031935.10_2	chr9	-	2117	11	FSM	ENSMUSG00000031935.10	ENST00000639724.1	2137	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAACATAAACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	15191089	15173195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15173735_15176647_15176766_15178709_15178848_15181638_15181824_15182906_15183038_15183802_15183956_15185580_15185666_15185744_15185882_15187141_15187362_15188852_15189020_15190845
ENSMUSG00000031938.16_1	chr9	-	740	6	FSM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTGTAATGGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	15209232	15196111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15196288_15198651_15198769_15203295_15203473_15205727_15205830_15205981_15206056_15209138
ENSMUSG00000031938.16_2	chr9	-	714	6	FSM	ENSMUSG00000031938.16	ENST00000617482.4	726	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTAATGGTTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	15209232	15196110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15196288_15198651_15198769_15201962_15202113_15205727_15205830_15205981_15206056_15209138
ENSMUSG00000031938.16_3	chr9	-	649	5	ISM	ENSMUSG00000031938.16	ENST00000528288.5	753	6	3182	5	3182	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGTAATGGTTAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	15206057	15196110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_15196288_15198651_15198769_15203295_15203473_15205727_15205830_15205981
ENSMUSG00000031939.17_0	chr9	+	1131	7	FSM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACCCAGCCTCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	15217517	15223391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ENSMUSG00000031939.17_1	chr9	+	997	6	FSM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTTTCGTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15217559	15223086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_15217580_15219023_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031939.17_2	chr9	+	1059	6	ISM	ENSMUSG00000031939.17	ENSMUST00000034415.6	1148	7	1520	13	1470	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATAAAACCCAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	15219029	15223387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822_15222992_15223204
ENSMUSG00000031939.17_3	chr9	+	966	5	ISM	ENSMUSG00000031939.17	ENSMUST00000164079.9	1005	6	1475	8	1475	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTTTTCGTTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	15219034	15223086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_15219118_15219820_15220212_15221154_15221331_15221653_15221706_15222822
ENSMUSG00000031948.15_0	chr8	-	2188	16	FSM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112737898	112720075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113_112735172_112737841
ENSMUSG00000031948.15_1	chr8	-	1996	14	FSM	ENSMUSG00000031948.15	ENSMUST00000034426.14	2008	14	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112737944	112720075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112737841
ENSMUSG00000031948.15_12	chr8	-	2125	15	ISM	ENSMUSG00000031948.15	ENSMUST00000164470.3	2189	16	2733	1	2733	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112735165	112720075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112735113
ENSMUSG00000031948.15_2	chr8	-	2069	14	ISM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	2884	1	2884	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112735014	112720075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838
ENSMUSG00000031948.15_3	chr8	-	2128	15	FSM	ENSMUSG00000031948.15	ENSMUST00000093120.13	2131	15	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGCAGTGTTACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112737896	112720075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112720339_112721495_112721640_112723091_112723219_112724207_112724294_112724921_112725008_112725153_112725328_112725431_112725595_112726701_112726822_112728115_112728242_112728332_112728520_112729142_112729237_112729906_112730073_112732263_112732421_112734838_112735019_112737841
ENSMUSG00000031949.18_0	chr8	-	3133	10	FSM	ENSMUSG00000031949.18	ENSMUST00000034427.12	3159	10	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAATGTGAAGTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	112718919	112693550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112695177_112698736_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ENSMUSG00000031949.18_1	chr8	-	2741	9	FSM	ENSMUSG00000031949.18	ENSMUST00000139820.8	2762	9	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCACTTAAGGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	112718920	112697503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112698824_112704670_112704771_112705930_112706077_112708793_112709398_112713753_112713885_112714454_112714510_112716482_112716552_112716836_112717045_112718812
ENSMUSG00000031950.8_0	chr8	+	1667	4	FSM	ENSMUSG00000031950.8	ENSMUST00000034428.8	1677	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATAAAACATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	112667344	112680244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112667485_112667791_112667848_112669133_112669307_112678946
ENSMUSG00000031950.8_3	chr8	+	761	3	FSM	ENSMUSG00000031950.8	ENST00000563744.1	777	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGCATCACGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	112667371	112679538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112667485_112667791_112667848_112678946
ENSMUSG00000031951.9_0	chr8	-	2966	7	FSM	ENSMUSG00000031951.9	ENSMUST00000034429.9	2984	7	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAAAAGAACGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	112660507	112638654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112640742_112641120_112641227_112641888_112641971_112644922_112645067_112645459_112645589_112659991_112660162_112660259
ENSMUSG00000031953.3_0	chr8	-	3855	3	FSM	ENSMUSG00000031953.3	ENSMUST00000034431.3	3878	3	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTTAAATTCTTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	112603370	112589680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112593129_112596219_112596391_112603134
ENSMUSG00000031953.3_1	chr8	-	218	2	FSM	ENSMUSG00000031953.3	ENST00000566980.1	235	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCCGCCCTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	112596379	112593001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112593129_112596288
ENSMUSG00000031953.3_2	chr8	-	128	1	NIC	ENSMUSG00000031953.3	novel	3878	3	NA	NA	3262	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCCTCCGCCCTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	112593129	112593001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_112593000_112593100
ENSMUSG00000031954.7_0	chr8	-	1160	7	FSM	ENSMUSG00000031954.7	ENSMUST00000034432.7	1178	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3043	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTCTGTGAGGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	112580912	112495129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112495420_112505882_112506042_112557501_112557622_112566989_112567118_112568414_112568623_112571725_112571844_112580775
ENSMUSG00000031955.11_0	chr8	-	3118	7	FSM	ENSMUSG00000031955.11	ENSMUST00000166232.4	3142	7	13	11	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCAAAGGAGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	112470428	112437116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112470320
ENSMUSG00000031955.11_2	chr8	-	3098	7	FSM	ENSMUSG00000031955.11	ENSMUST00000212349.2	3116	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCAAAGGAGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	112458758	112437116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112458670
ENSMUSG00000031955.11_3	chr8	-	3238	8	FSM	ENSMUSG00000031955.11	ENST00000418647.7	3260	8	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCAGTAGGAGTGTACCG	NA	NA	NA	NA	NA	NA	NA	NA	112470486	112437308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441914_112442032_112442246_112442409_112447330_112447964_112468893_112469148_112470320
ENSMUSG00000031955.11_5	chr8	-	2654	6	FSM	ENSMUSG00000031955.11	ENST00000393420.10	2665	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGAGGACCAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	112447954	112437514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112438027_112439232_112439323_112439970_112441069_112441863_112442032_112442246_112442409_112447330
ENSMUSG00000031958.17_0	chr8	-	1434	10	FSM	ENSMUSG00000031958.17	ENST00000300051.8	1443	10	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGAATGTGTAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	112356668	112353660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112353823_112353909_112354022_112354119_112354211_112354730_112354859_112354941_112355071_112355152_112355427_112355617_112355778_112355912_112356055_112356237_112356380_112356574
ENSMUSG00000031959.16_0	chr8	-	5050	26	FSM	ENSMUSG00000031959.16	ENSMUST00000038193.15	5083	26	30	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGACAATCGTGTACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	112248694	112175431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_112177712_112185242_112185386_112185554_112185682_112187214_112187288_112187393_112187545_112188787_112188901_112192420_112192503_112193420_112193555_112202675_112202830_112205939_112206010_112207074_112207232_112207387_112207484_112208491_112208657_112211721_112211847_112211969_112212103_112213547_112213628_112216923_112217081_112219326_112219405_112220879_112220997_112223438_112223528_112225203_112225242_112227668_112227750_112229113_112229200_112230966_112231103_112232523_112232574_112248559
ENSMUSG00000031960.15_0	chr8	+	5735	21	FSM	ENSMUSG00000031960.15	ENSMUST00000034441.8	5750	21	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTGTGTGTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	111760541	111784289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111760896_111763540_111763706_111766763_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_15	chr8	+	3167	19	FSM	ENSMUSG00000031960.15	ENST00000565361.3	3183	19	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	111766770	111782197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773742_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779987_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031960.15_25	chr8	+	3099	19	FSM	ENSMUSG00000031960.15	ENST00000674512.1	3112	19	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTGGTGATGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	111766767	111782197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111766953_111767228_111767375_111768109_111768302_111768872_111769018_111769294_111769441_111769864_111769974_111770274_111770426_111771509_111771635_111772158_111772304_111773562_111773721_111774543_111774658_111776330_111776538_111776976_111777162_111779044_111779154_111779822_111779937_111780520_111780641_111780756_111780844_111781140_111781255_111781650
ENSMUSG00000031962.7_0	chr8	+	3239	14	FSM	ENSMUSG00000031962.7	ENSMUST00000034443.7	3251	14	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	2851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACAGGTGCCCAGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	123574713	123594133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591969_123592066_123592204_123592336_123592502_123593561
ENSMUSG00000031962.7_6	chr8	+	2446	14	FSM	ENSMUSG00000031962.7	ENST00000289746.3	2465	14	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACATCAGTGAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	123575124	123593748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123575269_123583240_123583397_123584098_123584255_123585976_123586122_123587576_123587738_123588195_123588325_123588716_123588903_123590043_123590298_123590981_123591125_123591237_123591478_123591728_123591956_123592050_123592204_123592336_123592502_123593561
ENSMUSG00000031963.9_0	chr9	+	3773	15	FSM	ENSMUSG00000031963.9	ENSMUST00000071982.7	3791	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTAAGCAAACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23134380	23396487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_23135070_23136053_23136140_23165667_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933_23289039_23292724_23292771_23310645_23310976_23317790_23318128_23384741_23384873_23395146
ENSMUSG00000031963.9_2	chr9	+	2661	14	FSM	ENSMUSG00000031963.9	ENST00000648848.1	2676	14	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTCGGCTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23134874	23396199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_23135070_23136053_23136140_23165667_23165768_23204700_23204784_23208501_23208593_23212235_23212319_23277487_23277588_23285128_23285239_23286861_23287003_23288933_23289039_23292724_23292771_23317790_23318128_23384741_23384873_23395146
ENSMUSG00000031967.16_0	chr8	+	4207	17	FSM	ENSMUSG00000031967.16	ENSMUST00000001520.13	4227	17	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATGTGTATGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	124204654	124230648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124204787_124207087_124207176_124207809_124207885_124211341_124211428_124212627_124212778_124214097_124214167_124214939_124215065_124216493_124216765_124219279_124219418_124219613_124219768_124220566_124220675_124221544_124221671_124225326_124225438_124226730_124226847_124227971_124228173_124228253_124228449_124228586
ENSMUSG00000031969.17_0	chr9	-	2867	11	FSM	ENSMUSG00000031969.17	ENSMUST00000120367.8	2885	11	9	9	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTTATTTTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	26910853	26885439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901489_26901874_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031969.17_2	chr9	-	2843	11	FSM	ENSMUSG00000031969.17	ENSMUST00000060513.8	2859	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAAAATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	26910835	26885445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_26887057_26888851_26888955_26889606_26889760_26890280_26890379_26890471_26890608_26896758_26896897_26901415_26901493_26901878_26901989_26902535_26902706_26903455_26903557_26910689
ENSMUSG00000031970.17_0	chr8	-	1651	4	FSM	ENSMUSG00000031970.17	ENSMUST00000176155.2	1677	4	25	1	17	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTGACCTGCCCGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	124242177	124232426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124233578_124235821_124235963_124236580_124236734_124241971
ENSMUSG00000031971.16_0	chr8	-	2387	3	FSM	ENSMUSG00000031971.16	ENSMUST00000034452.12	2390	3	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGCCTTGCTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	124586269	124567572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124569258_124571918_124572185_124585833
ENSMUSG00000031971.16_2	chr8	-	2653	4	FSM	ENSMUSG00000031971.16	ENSMUST00000122421.2	2673	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTACATGTTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	124586936	124567590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124569258_124571918_124572185_124585833_124586189_124586571
ENSMUSG00000031972.6_0	chr8	-	1446	7	FSM	ENSMUSG00000031972.6	ENSMUST00000034453.6	1446	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124621490	124618507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620307_124620449_124621430
ENSMUSG00000031972.6_2	chr8	-	1382	6	ISM	ENSMUSG00000031972.6	ENSMUST00000034453.6	1446	7	1046	0	7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAACTGTGTGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	124620444	124618507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_124618892_124618967_124619150_124619282_124619475_124619571_124619734_124619884_124620210_124620307
ENSMUSG00000031974.9_0	chr8	-	4285	13	FSM	ENSMUSG00000031974.9	ENSMUST00000075578.7	4306	13	11	10	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTTAATCTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	124709850	124679207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709_124697911_124709140
ENSMUSG00000031974.9_5	chr8	-	1684	12	ISM	ENSMUSG00000031974.9	ENST00000344517.5	1700	13	9	1893	9	-1893	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATAATGGAGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	124697904	124681092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_124681315_124681461_124681497_124682511_124682556_124685237_124685419_124686948_124687029_124688734_124688945_124689731_124689828_124691729_124691866_124693204_124693352_124694739_124694875_124696458_124696662_124697709
ENSMUSG00000031976.15_0	chr8	+	5829	9	FSM	ENSMUSG00000031976.15	ENSMUST00000034457.9	5853	9	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTCACATAGTATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	124750149	124775237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124750338_124751794_124751972_124754597_124757929_124761766_124761928_124763374_124763486_124764899_124765143_124767904_124767993_124771817_124771958_124773847
ENSMUSG00000031979.18_0	chr8	+	2804	18	FSM	ENSMUSG00000031979.18	ENSMUST00000034460.11	2825	18	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCAAATGTGTGAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	125247518	125278739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125247691_125252369_125252532_125253838_125253905_125255714_125255796_125256636_125256741_125259167_125259277_125259952_125260133_125262137_125262263_125264521_125264649_125267711_125267852_125269627_125269690_125270748_125270901_125271867_125272042_125272758_125272832_125273289_125273433_125275255_125275396_125276905_125277090_125278129
ENSMUSG00000031980.11_0	chr8	-	1850	4	ISM	ENSMUSG00000031980.11	ENSMUST00000238882.2	1891	5	5133	2	5133	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAATGTCTTACGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	125291312	125283274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_125283861_125284479_125284625_125285968_125286237_125290461
ENSMUSG00000031980.11_1	chr8	-	1883	5	FSM	ENSMUSG00000031980.11	ENSMUST00000238882.2	1891	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCCTACAATGTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	125296445	125283280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125283861_125284479_125284625_125285968_125286237_125290461_125291321_125296414
ENSMUSG00000031981.8_1	chr8	+	1781	16	FSM	ENSMUSG00000031981.8	ENST00000354537.1	1794	16	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTAAAGAAACAAGTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	125302892	125341363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125303097_125315771_125315842_125318418_125318538_125321367_125321502_125324237_125324407_125325448_125325533_125327140_125327227_125330928_125331090_125332144_125332303_125332434_125332644_125334693_125334731_125335831_125335913_125338241_125338300_125340155_125340221_125340559_125340629_125341286
ENSMUSG00000031982.6_0	chr8	+	1145	6	FSM	ENSMUSG00000031982.6	ENSMUST00000034463.4	1165	6	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTAAGGTTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125448894	125460859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125449082_125451994_125452115_125455067_125455222_125457530_125457756_125458535_125458681_125460545
ENSMUSG00000031983.8_0	chr8	-	3288	4	FSM	ENSMUSG00000031983.8	ENSMUST00000034464.8	3307	4	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGAGTCAGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	125390099	125362504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125364704_125365829_125366355_125378109_125378161_125389586
ENSMUSG00000031984.9_0	chr8	-	2324	7	FSM	ENSMUSG00000031984.9	ENSMUST00000034465.9	2340	7	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGATTCTGATGAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	125589846	125565229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125566706_125567186_125567246_125568032_125568120_125568425_125568522_125569101_125569159_125587684_125588011_125589623
ENSMUSG00000031985.10_0	chr8	+	2966	16	FSM	ENSMUSG00000031985.10	ENSMUST00000034466.10	2984	16	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTATACCCAATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	125589781	125616788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125590052_125597514_125597698_125600071_125600249_125600957_125601088_125603658_125603787_125604173_125604250_125605251_125605404_125605522_125605654_125606867_125607092_125610094_125610338_125611703_125611784_125612533_125612675_125613421_125613519_125613591_125613686_125614496_125614559_125616010
ENSMUSG00000031986.7_0	chr8	+	4443	5	FSM	ENSMUSG00000031986.7	ENSMUST00000034467.7	4464	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAAGTGGTTGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125624638	125632893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125625121_125625814_125625915_125626945_125627075_125628363_125628632_125629429
ENSMUSG00000031987.7_1	chr8	-	1917	6	FSM	ENSMUSG00000031987.7	ENST00000366641.4	1940	6	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATGAAAACAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	125675798	125636045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125636240_125636931_125637503_125638479_125638548_125640755_125640893_125642399_125642520_125674971
ENSMUSG00000031988.11_0	chr9	-	3559	6	FSM	ENSMUSG00000031988.11	ENSMUST00000034470.11	3575	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACCAGATTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	26941351	26919072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_26921334_26921659_26921803_26924020_26924197_26926452_26926618_26930613_26930771_26940694
ENSMUSG00000031990.16_0	chr9	-	1929	9	FSM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTCATGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	27066682	27008685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644_27017711_27066586
ENSMUSG00000031990.16_1	chr9	-	1834	8	ISM	ENSMUSG00000031990.16	ENSMUST00000034472.16	1942	9	48978	6	48978	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTCATGTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	27017711	27008685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_27009698_27010007_27010063_27010140_27010271_27011378_27011479_27012533_27012737_27013159_27013313_27016802_27016917_27017644
ENSMUSG00000031993.8_0	chr9	+	5749	11	FSM	ENSMUSG00000031993.8	ENSMUST00000164099.3	5762	11	1	12	1	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAATATAACATATAGT	NA	NA	NA	NA	NA	NA	NA	NA	30338404	30378010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_30340553_30343530_30343670_30344625_30344727_30344831_30344952_30347107_30347239_30348070_30348168_30348645_30348827_30351391_30351522_30373526_30373712_30374515_30374604_30375581
ENSMUSG00000031996.18_0	chr9	-	3445	16	FSM	ENSMUSG00000031996.18	ENSMUST00000217641.2	3462	16	16	1	-12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	31123067	31060853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_2	chr9	-	3621	17	FSM	ENSMUSG00000031996.18	ENSMUST00000072634.15	3634	17	12	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	31123075	31060853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_4	chr9	-	3480	17	FSM	ENSMUSG00000031996.18	ENSMUST00000079758.9	3504	17	23	1	-11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTTGTGTTCCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	31123066	31060853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000031996.18_7	chr9	-	3618	18	FSM	ENSMUSG00000031996.18	ENST00000650012.1	3633	18	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCCCCTGAGCACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	31123047	31060864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_31062269_31063132_31063289_31063608_31063684_31064709_31064796_31067485_31067522_31068990_31069144_31069794_31069895_31072522_31072652_31073054_31073214_31074641_31074717_31075838_31075970_31078856_31079025_31080003_31080213_31081732_31081930_31083229_31083343_31088313_31088438_31089200_31089375_31122918
ENSMUSG00000032002.11_0	chr9	+	2412	8	FSM	ENSMUSG00000032002.11	ENSMUST00000215683.2	2421	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTGCCTTCTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	7184528	7208205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7184883_7186767_7186860_7188745_7188817_7189161_7189254_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUSG00000032002.11_13	chr9	+	755	5	FSM	ENSMUSG00000032002.11	ENST00000531543.1	777	5	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAATAAAGATTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	7184723	7206998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7184883_7203262_7203372_7203450_7203556_7205297_7205401_7206719
ENSMUSG00000032006.16_0	chr9	+	3105	7	FSM	ENSMUSG00000032006.16	ENSMUST00000058692.9	3131	7	18	8	-10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACCAATTAAAGCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	6168601	6378837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_6168919_6288489_6288677_6293756_6293938_6333323_6333387_6337242_6337442_6359702_6359918_6376894
ENSMUSG00000032009.9_0	chr9	+	9106	10	FSM	ENSMUSG00000032009.9	ENSMUST00000208222.2	9125	10	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGATCCTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	14187605	14244387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_14187926_14217494_14217561_14219756_14219955_14221543_14221727_14225791_14226029_14227361_14227537_14231590_14231710_14232367_14232559_14233858_14234004_14236915
ENSMUSG00000032010.16_0	chr9	+	3853	13	FSM	ENSMUSG00000032010.16	ENSMUST00000034508.14	3867	13	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGAAGCTGGTGTGACG	NA	NA	NA	NA	NA	NA	NA	NA	43978323	44006916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_43978518_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUSG00000032010.16_1	chr9	+	2074	13	FSM	ENSMUSG00000032010.16	ENSMUST00000114830.9	2122	13	11	37	11	27	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43980750	44005253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_43980829_43986662_43987520_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUSG00000032010.16_3	chr9	+	2024	12	FSM	ENSMUSG00000032010.16	ENSMUST00000065461.9	2057	12	15	18	4	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTTTGAAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	43996250	44005756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_43996633_44000428_44000480_44001326_44001451_44002300_44002413_44002508_44002620_44003132_44003198_44003381_44003486_44003572_44003654_44003773_44003853_44003998_44004107_44004423_44004545_44005070
ENSMUSG00000032012.10_0	chr9	+	5641	6	FSM	ENSMUSG00000032012.10	ENSMUST00000034510.9	5653	6	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAAGCCCAAGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43655285	43718751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_43656020_43702333_43702685_43703173_43703477_43703744_43703863_43705386_43705539_43714768
ENSMUSG00000032014.7_1	chr9	-	2506	4	FSM	ENSMUSG00000032014.7	ENSMUST00000034512.7	2526	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGCCAAAACAAAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	43151195	43132538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_43134137_43135193_43135375_43136172_43136308_43150603
ENSMUSG00000032014.7_6	chr9	-	725	4	FSM	ENSMUSG00000032014.7	ENST00000531220.1	733	4	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAACAGGAGACAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	43150833	43133874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_43134137_43135193_43135375_43136172_43136225_43150603
ENSMUSG00000032018.15_0	chr9	-	4784	6	FSM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATCATTGTGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	42175552	42162893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175501
ENSMUSG00000032018.15_1	chr9	-	4724	5	ISM	ENSMUSG00000032018.15	ENSMUST00000052725.15	4787	6	2134	3	2078	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATCATTGTGTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	42173418	42162893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346
ENSMUSG00000032018.15_3	chr9	-	1667	6	FSM	ENSMUSG00000032018.15	ENSMUST00000169609.2	1677	6	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAGCTCTTCCATAA	NA	NA	NA	NA	NA	NA	NA	NA	42175489	42166031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42167094_42167402_42167504_42169876_42170010_42170977_42171196_42173346_42173428_42175417
ENSMUSG00000032020.16_0	chr9	-	6332	14	FSM	ENSMUSG00000032020.16	ENSMUST00000044155.15	6354	14	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTACAGATTTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	41069345	40922402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_40926333_40927893_40928004_40929312_40929420_40934716_40934862_40937545_40937639_40939312_40939436_40940934_40941056_40942776_40942910_40948732_40948942_40954770_40954941_40958176_40958376_40961735_40961923_40962612_40962667_41068594
ENSMUSG00000032024.11_0	chr9	+	4135	7	FSM	ENSMUSG00000032024.11	ENSMUST00000034522.8	4154	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGACATTTGTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	40597319	40696608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40597656_40672196_40672355_40682400_40682603_40683656_40683825_40685658_40685782_40692408_40692551_40693602
ENSMUSG00000032026.8_0	chr9	-	1059	7	FSM	ENSMUSG00000032026.8	ENSMUST00000034524.5	1077	7	10	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAACCCTTCGGCACC	NA	NA	NA	NA	NA	NA	NA	NA	48391901	48379819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385814_48386419_48386498_48390609_48390694_48391706
ENSMUSG00000032026.8_5	chr9	-	722	7	FSM	ENSMUSG00000032026.8	ENST00000539754.5	736	7	13	1	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCGCAGAGCCTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	48391895	48380105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48380247_48383119_48383174_48384331_48384441_48385701_48385769_48386419_48386498_48390609_48390694_48391706
ENSMUSG00000032030.17_0	chr9	-	5921	18	FSM	ENSMUSG00000032030.17	ENSMUST00000166367.8	5942	18	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGGCAGTATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	53578791	53525886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ENSMUSG00000032030.17_1	chr9	-	5928	20	FSM	ENSMUSG00000032030.17	ENSMUST00000120122.8	5945	20	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGGGCAGTATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	53581302	53525886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569257_53569486_53569870_53569981_53581150
ENSMUSG00000032030.17_7	chr9	-	3568	19	FSM	ENSMUSG00000032030.17	ENSMUST00000034529.14	3585	19	13	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAAAATGTGTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	53578798	53528327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53529311_53532459_53532584_53533157_53533277_53534081_53534244_53534934_53535111_53535457_53535582_53537162_53537295_53540474_53540608_53543572_53543638_53545031_53545140_53545284_53545416_53546271_53546366_53553817_53553899_53553980_53554127_53555786_53555929_53557966_53558144_53566571_53566672_53569870_53569981_53578337
ENSMUSG00000032035.17_0	chr9	+	5066	8	FSM	ENSMUSG00000032035.17	ENSMUST00000034534.13	5080	8	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAATGAGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	32607323	32669108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649656_32664094_32664214_32665508
ENSMUSG00000032035.17_1	chr9	+	1950	7	FSM	ENSMUSG00000032035.17	ENSMUST00000050797.14	1976	7	25	1	25	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTTTTTCCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	32607369	32666299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32664094_32664214_32665508
ENSMUSG00000032035.17_2	chr9	+	2100	7	FSM	ENSMUSG00000032035.17	ENSMUST00000184887.2	2107	7	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCACTGTCAGGCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	32607421	32666569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_32607762_32639970_32640091_32641350_32641552_32644244_32644323_32645235_32645485_32649394_32649446_32665508
ENSMUSG00000032036.16_0	chr9	+	4125	17	NNC	ENSMUSG00000032036.16	novel	4147	17	NA	NA	-15	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGGACTCAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34400108	34948005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_34400456_34816218_34816322_34823079_34823158_34850407_34850558_34855665_34855816_34902230_34902389_34912150_34912302_34918988_34919095_34924563_34924713_34926550_34926679_34927717_34927845_34931386_34931488_34934749_34934949_34939627_34939736_34941069_34941180_34945497_34945585_34946132
ENSMUSG00000032038.8_0	chr9	-	2074	11	FSM	ENSMUSG00000032038.8	ENSMUST00000034537.8	2095	11	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAAGCACTTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	35028157	34957880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_34958816_34959114_34959259_34963535_34963680_34964373_34964564_34964667_34964764_34965358_34965420_34965730_34965829_34965997_34966079_34966493_34966579_34966869_34966946_35027993
ENSMUSG00000032040.16_0	chr9	-	1258	6	FSM	ENSMUSG00000032040.16	ENSMUST00000034539.12	1274	6	12	4	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35087345	35035707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35036141_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUSG00000032040.16_2	chr9	-	1426	7	FSM	ENSMUSG00000032040.16	ENSMUST00000119847.2	1445	7	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGATGGTGTAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35087336	35035707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35036141_35036462_35036640_35037602_35037714_35040756_35040871_35047639_35047786_35082372_35082548_35087066
ENSMUSG00000032041.16_0	chr9	-	4552	7	FSM	ENSMUSG00000032041.16	ENSMUST00000175765.8	4589	7	31	6	31	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTCATGTTGTTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	35111556	35095852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110516_35110616_35111460
ENSMUSG00000032041.16_1	chr9	-	2307	7	FSM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35111221	35098080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111152
ENSMUSG00000032041.16_2	chr9	-	2234	6	ISM	ENSMUSG00000032041.16	ENSMUST00000176531.8	2310	7	613	0	613	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35110611	35098080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506
ENSMUSG00000032041.16_3	chr9	-	2363	7	FSM	ENSMUSG00000032041.16	ENSMUST00000177129.8	2366	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35111281	35098080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35099227_35099952_35100592_35102313_35102473_35102616_35102679_35102869_35102993_35110506_35110616_35111156
ENSMUSG00000032042.12_0	chr9	+	2973	14	FSM	ENSMUSG00000032042.12	ENSMUST00000034541.12	2993	14	9	11	9	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1707	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATTGCCTCTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	35122459	35128299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_35122702_35123287_35123372_35123643_35123808_35124015_35124177_35124425_35124583_35124678_35124833_35125042_35125132_35125232_35125352_35125482_35125570_35125855_35126029_35126113_35126328_35126762_35126927_35127010_35127110_35127233
ENSMUSG00000032044.5_0	chr9	+	1805	7	FSM	ENSMUSG00000032044.5	ENSMUST00000034543.5	1821	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTTTTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	35179169	35187254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_35179375_35179697_35179864_35181260_35181463_35183829_35183924_35183997_35184143_35184763_35184862_35186359
ENSMUSG00000032046.16_0	chr2	-	1984	13	FSM	ENSMUSG00000032046.16	ENSMUST00000056149.15	1999	13	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGCAGGAATCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150746651	150674417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680234_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUSG00000032046.16_1	chr2	-	1986	13	NNC	ENSMUSG00000032046.16	novel	1999	13	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGCAGGAATCAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	150746656	150674417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_150675061_150676198_150676327_150677192_150677272_150679271_150679355_150680237_150680315_150680660_150680699_150681639_150681770_150684165_150684212_150685310_150685342_150688163_150688284_150690271_150690378_150700279_150700405_150746276
ENSMUSG00000032047.6_0	chr9	-	3397	12	FSM	ENSMUSG00000032047.6	ENSMUST00000034547.6	3405	12	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATTAAAGTTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	53521674	53491821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53493966_53494736_53494895_53496139_53496205_53498752_53498867_53500477_53500574_53502606_53502758_53503267_53503412_53505705_53505807_53505993_53506090_53506582_53506701_53509384_53509433_53521512
ENSMUSG00000032050.19_18	chr9	+	1501	8	FSM	ENSMUSG00000032050.19	ENST00000528900.5	1515	8	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATATTCTAATGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	51972149	52014701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_51972204_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_24	chr9	+	2452	15	FSM	ENSMUSG00000032050.19	ENST00000647231.1	2462	15	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTAATGTCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	51972148	52014704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_3	chr9	+	4362	14	FSM	ENSMUSG00000032050.19	ENSMUST00000000590.16	4380	14	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCCCGCCTTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	51959423	52000020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614
ENSMUSG00000032050.19_36	chr9	+	2388	14	ISM	ENSMUSG00000032050.19	ENST00000647231.1	2462	15	2739	9	-1279	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTAATGTCATCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	51974886	52014704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670_52011764_52014136
ENSMUSG00000032050.19_43	chr9	+	1500	11	FSM	ENSMUSG00000032050.19	ENST00000367074.4	1514	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGATGAAACCAAGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	51976173	51997641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993746_51993836_51996402_51996646_51997614
ENSMUSG00000032050.19_8	chr9	+	2144	15	FSM	ENSMUSG00000032050.19	ENSMUST00000238858.2	2163	15	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGGTAAGCAAAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	51959484	52011758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_51959733_51972131_51972204_51974877_51974962_51976159_51976256_51976944_51977220_51978660_51978745_51979429_51979577_51980106_51980204_51980914_51981079_51984453_51984585_51992318_51992480_51993742_51993836_51996402_51996646_51997614_51997776_52011670
ENSMUSG00000032051.10_0	chr9	-	860	4	FSM	ENSMUSG00000032051.10	ENSMUST00000034552.8	875	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACCATGAGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51874837	51854611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_51854950_51859876_51860007_51868372_51868498_51874570
ENSMUSG00000032057.10_0	chr9	-	945	6	FSM	ENSMUSG00000032057.10	ENSMUST00000170947.3	973	6	14	14	14	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATAAAATGTCCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	51013364	50992428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50992831_50994878_50994932_50997413_50997474_51011299_51011371_51012353_51012393_51013044
ENSMUSG00000032058.15_0	chr9	+	3415	15	FSM	ENSMUSG00000032058.15	ENSMUST00000114437.9	3430	15	12	3	-8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTAATTTCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	50768248	50792728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50768399_50769135_50769227_50770150_50770252_50772830_50773064_50773665_50773814_50777743_50777900_50778127_50778243_50778625_50778697_50778962_50779098_50781362_50781537_50784946_50785008_50789337_50789493_50789997_50790141_50790509_50790602_50791138
ENSMUSG00000032059.14_0	chr9	+	2866	15	FSM	ENSMUSG00000032059.14	ENSMUST00000034561.11	2873	15	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTAAGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	50686323	50754826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50686819_50687843_50687980_50690269_50690405_50694557_50694629_50699452_50699542_50700796_50700933_50703362_50703451_50703601_50703708_50711418_50711542_50713237_50713393_50716601_50716732_50717521_50717670_50719976_50720107_50733884_50734016_50754033
ENSMUSG00000032060.11_1	chr9	+	1095	4	FSM	ENSMUSG00000032060.11	ENSMUST00000217475.2	1117	4	13	9	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACAAACCTGCCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	50662637	50667927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50662877_50664380_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_5	chr9	+	906	3	FSM	ENSMUSG00000032060.11	ENSMUST00000034562.9	946	3	37	3	37	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGTGATTGAAAATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50664243	50667840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_7	chr9	+	829	4	FSM	ENSMUSG00000032060.11	ENSMUST00000214962.2	846	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGCAACAAACCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	50664302	50667923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50664385_50664485_50664778_50665811_50665935_50667591
ENSMUSG00000032060.11_9	chr9	+	820	4	FSM	ENSMUSG00000032060.11	ENSMUST00000216755.2	836	4	7	9	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACAAACCTGCCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	50664326	50667927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50664396_50664485_50664778_50665811_50665935_50667591
ENSMUSG00000032062.4_0	chr9	-	1234	4	FSM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTGGTGATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	50657821	50650998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50652050_50652595_50652661_50653560_50653599_50657741
ENSMUSG00000032062.4_1	chr9	-	1155	3	ISM	ENSMUSG00000032062.4	ENSMUST00000239417.2	1242	4	4222	8	4222	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCTGGTGATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	50653599	50650998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_50652050_50652595_50652661_50653560
ENSMUSG00000032064.18_0	chr9	-	5711	20	FSM	ENSMUSG00000032064.18	ENSMUST00000117646.8	5719	20	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAATCCACTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	50639363	50574059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622142_50622273_50639085
ENSMUSG00000032064.18_1	chr9	-	5693	20	FSM	ENSMUSG00000032064.18	ENSMUST00000034566.15	5709	20	8	8	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAAATCCACTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	50639267	50574059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622064_50622273_50639085
ENSMUSG00000032064.18_3	chr9	-	2405	21	FSM	ENSMUSG00000032064.18	ENSMUST00000121634.8	2420	21	1	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAGAGAATTAACGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	50650816	50577508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50577576_50578959_50579069_50580749_50580856_50592786_50592854_50593332_50593501_50593836_50593927_50595024_50595097_50595173_50595267_50595653_50595708_50596127_50596233_50598660_50598712_50599902_50599957_50601159_50601250_50604842_50604992_50606770_50606884_50613219_50613328_50614421_50614654_50617424_50617551_50622064_50622273_50648943_50649036_50650565
ENSMUSG00000032067.7_0	chr9	-	1032	6	FSM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	9	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCTCGTTTTCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	50439942	50432921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169_50438250_50439856
ENSMUSG00000032067.7_1	chr9	-	949	5	ISM	ENSMUSG00000032067.7	ENSMUST00000034570.7	1046	6	1699	5	1647	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCTCGTTTTCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	50438252	50432921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_50433637_50433828_50433900_50436022_50436080_50436561_50436585_50438169
ENSMUSG00000032067.7_2	chr9	-	275	3	ISM	ENSMUSG00000032067.7	ENST00000525803.1	329	4	1655	6	1655	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTGCTATTGTAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	50438244	50433507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_50433637_50433828_50433900_50438169
ENSMUSG00000032067.7_3	chr9	-	323	4	FSM	ENSMUSG00000032067.7	ENST00000525803.1	329	4	0	6	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTGCTATTGTAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	50439899	50433507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50433637_50433828_50433900_50438169_50438250_50439856
ENSMUSG00000032076.21_16	chr9	+	4429	10	NNC	ENSMUSG00000032076.21	novel	4444	10	NA	NA	10	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACAAGTGATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47441564	47764669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_47441806_47699266_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ENSMUSG00000032076.21_23	chr9	+	4428	10	FSM	ENSMUSG00000032076.21	ENSMUST00000114547.8	4444	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTACAAGTGATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47441561	47764669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_47441804_47699268_47699416_47700994_47701148_47708704_47708843_47710669_47710829_47721341_47721442_47725070_47725244_47730031_47730116_47759464_47759597_47761569
ENSMUSG00000032077.6_0	chr9	+	2524	10	FSM	ENSMUSG00000032077.6	ENSMUST00000074957.5	2539	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTAGAGTGTGGCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	46194314	46210402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_46194472_46197640_46197732_46198314_46198400_46198959_46199734_46201423_46201642_46202605_46202709_46202992_46203132_46203363_46203549_46203745_46203828_46209712
ENSMUSG00000032078.18_0	chr9	+	2964	14	FSM	ENSMUSG00000032078.18	ENSMUST00000156440.8	2984	14	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAAACGTTTGGTACA	NA	NA	NA	NA	NA	NA	NA	NA	46184372	46193932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_46184666_46184775_46184938_46185353_46185445_46185954_46186026_46186661_46186749_46187028_46187152_46187497_46187546_46187709_46187777_46188089_46188161_46188943_46189034_46189601_46189713_46190966_46191054_46191213_46191280_46192335
ENSMUSG00000032079.13_0	chr9	+	1114	2	FSM	ENSMUSG00000032079.13	ENST00000673688.1	1122	2	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCACTCCGGTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	46180538	46182015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_46180624_46180986
ENSMUSG00000032079.13_1	chr9	+	1029	1	NIC	ENSMUSG00000032079.13	novel	2515	4	NA	NA	453	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTCACTCCGGTTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	46180986	46182015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_46181000_46182000
ENSMUSG00000032083.9_0	chr9	+	1026	4	FSM	ENSMUSG00000032083.9	ENSMUST00000034588.9	1035	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAATAGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	46139877	46141755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_46140035_46140235_46140298_46140413_46140568_46141102
ENSMUSG00000032085.6_0	chr9	-	1574	5	FSM	ENSMUSG00000032085.6	ENSMUST00000034590.4	1595	5	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCATTAAAAAATTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	45847348	45840929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45841814_45842130_45842234_45842597_45842776_45842879_45843072_45847131
ENSMUSG00000032086.13_1	chr9	+	6038	9	FSM	ENSMUSG00000032086.13	ENSMUST00000034591.11	6058	9	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATCAAACTATCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	45749891	45775691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767385_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032086.13_4	chr9	+	1309	9	FSM	ENSMUSG00000032086.13	ENST00000428381.6	1325	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGACGCCCCTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	45750334	45771612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45750587_45764185_45764275_45765924_45766010_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032086.13_6	chr9	+	1443	9	FSM	ENSMUSG00000032086.13	ENST00000513780.5	1457	9	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGACGCCCCTGGACCA	NA	NA	NA	NA	NA	NA	NA	NA	45750332	45771612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45750587_45764185_45764275_45765924_45766142_45767460_45767524_45768411_45768547_45769697_45769800_45770207_45770358_45770576_45770749_45771351
ENSMUSG00000032091.16_0	chr9	-	1385	10	FSM	ENSMUSG00000032091.16	ENST00000522307.5	1402	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGAGTGTTCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	45115248	45085158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095780_45115078
ENSMUSG00000032091.16_1	chr9	-	1443	11	FSM	ENSMUSG00000032091.16	ENST00000437212.8	1460	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGAGTGTTCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	45115248	45085158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092050_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032091.16_2	chr9	-	1427	11	FSM	ENSMUSG00000032091.16	ENST00000522824.5	1445	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGAGTGTTCCAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	45115247	45085158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45085306_45086399_45086543_45086756_45086856_45087683_45087851_45089003_45089164_45090700_45090742_45091947_45092035_45094475_45094606_45095538_45095692_45097112_45097227_45115061
ENSMUSG00000032096.17_1	chr9	-	4041	10	FSM	ENSMUSG00000032096.17	ENSMUST00000034607.10	4072	10	13	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	44679129	44652878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44671258_44671523_44678966
ENSMUSG00000032096.17_4	chr9	-	1677	9	FSM	ENSMUSG00000032096.17	ENST00000392859.7	1696	9	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGGAATGCCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	44679118	44654967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44655314_44656714_44656920_44661621_44661731_44662512_44662661_44663406_44663573_44668416_44668582_44669857_44670064_44670177_44670358_44678966
ENSMUSG00000032097.11_0	chr9	+	6054	14	FSM	ENSMUSG00000032097.11	ENSMUST00000170489.2	6065	14	4	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGGTGTCTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	44516192	44552021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44516282_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ENSMUSG00000032097.11_1	chr9	+	6022	14	FSM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGGTGTCTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	44516192	44552021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44516250_44518419_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ENSMUSG00000032097.11_4	chr9	+	5966	13	ISM	ENSMUSG00000032097.11	ENSMUST00000217034.2	6029	14	2226	7	2226	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCAGGTGTCTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	44518418	44552021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44518890_44524124_44524189_44525508_44525614_44534915_44535046_44535771_44535919_44537684_44537780_44538934_44539058_44539937_44540067_44541320_44541438_44542679_44542744_44545389_44545492_44546979_44547163_44547785
ENSMUSG00000032098.14_0	chr9	+	1548	13	FSM	ENSMUSG00000032098.14	ENST00000397925.2	1549	13	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTGACAAGAACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44592359	44597306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44592458_44592577_44592723_44592802_44592891_44593928_44594030_44594345_44594463_44594549_44594673_44594868_44594919_44595061_44595257_44595804_44596023_44596231_44596344_44596565_44596679_44596923_44596978_44597172
ENSMUSG00000032098.14_1	chr9	+	1455	12	ISM	ENSMUSG00000032098.14	ENST00000397925.2	1549	13	214	0	214	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGTGACAAGAACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44592572	44597306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44592723_44592802_44592891_44593928_44594030_44594345_44594463_44594549_44594673_44594868_44594919_44595061_44595257_44595804_44596023_44596231_44596344_44596565_44596679_44596923_44596978_44597172
ENSMUSG00000032103.11_0	chr9	+	2009	4	FSM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTCATCTTAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	35470755	35478687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_35470814_35476079_35476494_35476585_35477152_35477716
ENSMUSG00000032103.11_1	chr9	+	1948	3	ISM	ENSMUSG00000032103.11	ENSMUST00000034615.10	2019	4	5327	10	5321	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACTCATCTTAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	35476082	35478687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_35476494_35476585_35477152_35477716
ENSMUSG00000032105.6_0	chr9	-	1463	8	FSM	ENSMUSG00000032105.6	ENST00000525131.5	1480	8	14	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTGGAGTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44162139	44159548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160907_44161045_44161139_44161330_44161547_44161760_44162004
ENSMUSG00000032105.6_1	chr9	-	1352	8	FSM	ENSMUSG00000032105.6	ENST00000322712.4	1360	8	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTGGAGTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44162145	44159548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160949_44161045_44161139_44161330_44161547_44161760_44162079
ENSMUSG00000032105.6_3	chr9	-	1283	7	ISM	ENSMUSG00000032105.6	ENST00000322712.4	1360	8	394	3	394	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCTTGGAGTCTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	44161756	44159548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_44159729_44159852_44160060_44160143_44160341_44160531_44160737_44160949_44161045_44161139_44161330_44161547
ENSMUSG00000032109.16_0	chr9	-	3608	10	FSM	ENSMUSG00000032109.16	ENSMUST00000169651.3	3621	10	13	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGTGGTCTCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	44179412	44164014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44164837_44165288_44165541_44166727_44166815_44167628_44168225_44173528_44174351_44174925_44175546_44175999_44176089_44176460_44176531_44177040_44177155_44179276
ENSMUSG00000032109.16_1	chr9	-	3569	10	FSM	ENSMUSG00000032109.16	ENSMUST00000168499.9	3579	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTGTGGTCTCCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	44179886	44164014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44164837_44165288_44165541_44166727_44166815_44167628_44168225_44173528_44174351_44174925_44175546_44175999_44176089_44176460_44176531_44177040_44177163_44179797
ENSMUSG00000032112.11_0	chr9	-	1209	5	FSM	ENSMUSG00000032112.11	ENSMUST00000034623.8	1220	5	9	2	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTCTCTCCTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	44318888	44315057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44315396_44315630_44315758_44316539_44316644_44318100_44318276_44318423
ENSMUSG00000032112.11_2	chr9	-	750	5	FSM	ENSMUSG00000032112.11	ENST00000434101.6	758	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTGTTTTCTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	44318595	44315061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44315396_44315630_44315758_44316539_44316589_44318207_44318276_44318423
ENSMUSG00000032113.17_0	chr9	-	3385	13	FSM	ENSMUSG00000032113.17	ENSMUST00000034625.12	3397	13	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTGACAGGACAGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	36637948	36619783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36635092_36635317_36637092_36637175_36637858
ENSMUSG00000032113.17_4	chr9	-	1474	12	FSM	ENSMUSG00000032113.17	ENST00000427383.6	1490	12	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAGTGTTTGGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	36637967	36621489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36621727_36623337_36623440_36624616_36624749_36624978_36625157_36625720_36625830_36627721_36627818_36629626_36629732_36630799_36630989_36633899_36633970_36634056_36634122_36637092_36637175_36637858
ENSMUSG00000032114.10_0	chr9	+	2111	9	FSM	ENSMUSG00000032114.10	ENSMUST00000215420.2	2128	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATACTAAACAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	44308158	44314250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44308289_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUSG00000032114.10_2	chr9	+	2316	9	FSM	ENSMUSG00000032114.10	ENSMUST00000213388.2	2344	9	18	10	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAAACAGTCAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44308413	44314255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44308744_44309564_44309919_44310545_44310779_44311091_44311336_44311785_44311945_44312143_44312230_44312717_44312832_44313369_44313509_44313598
ENSMUSG00000032115.15_0	chr9	+	4427	26	FSM	ENSMUSG00000032115.15	ENSMUST00000066601.13	4432	26	3	2	3	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTTTGCTTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44290789	44303664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44290893_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032115.15_11	chr9	+	2954	23	ISM	ENSMUSG00000032115.15	ENST00000621959.4	3063	24	303	11	303	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTATTATGTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	44292111	44302577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032115.15_4	chr9	+	4477	26	FSM	ENSMUSG00000032115.15	ENSMUST00000161318.8	4489	26	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGTTGTATGTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44290877	44303656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44291039_44291809_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44298984_44299171_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032115.15_7	chr9	+	3048	24	FSM	ENSMUSG00000032115.15	ENST00000621959.4	3063	24	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACTATTATGTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	44291813	44302578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44291908_44292112_44292207_44292350_44292430_44292550_44292706_44292810_44292888_44293138_44293321_44293749_44293866_44295405_44295599_44295733_44295869_44295958_44296042_44296126_44296260_44296414_44296603_44296863_44297003_44298328_44298390_44298546_44298627_44299302_44299476_44299574_44299663_44299778_44299902_44300088_44300223_44300334_44300420_44300527_44300769_44300873_44300925_44302132_44302184_44302285
ENSMUSG00000032116.19_0	chr9	-	5850	18	FSM	ENSMUSG00000032116.19	ENSMUST00000120381.9	5867	18	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTGGCTGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36678964	36640645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36644259_36645610_36645727_36646648_36646838_36652784_36652888_36653009_36653127_36654711_36654901_36655291_36655448_36657849_36657942_36659220_36659377_36660848_36661030_36662477_36662643_36663625_36663733_36666101_36666193_36670017_36670164_36670498_36670621_36674632_36674694_36676349_36676477_36678845
ENSMUSG00000032119.6_0	chr9	-	5265	9	ISM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	3090	6	3090	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTTGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44213878	44203742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706
ENSMUSG00000032119.6_1	chr9	-	5322	10	FSM	ENSMUSG00000032119.6	ENSMUST00000216508.2	5333	10	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGACTTGAGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44216963	44203742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44207878_44208989_44209115_44209195_44209335_44209420_44209542_44209630_44209709_44210169_44210323_44210509_44210622_44210859_44211090_44213706_44213885_44216912
ENSMUSG00000032120.12_0	chr9	-	4318	14	FSM	ENSMUSG00000032120.12	ENSMUST00000065080.10	4337	14	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCAGCCTTGATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	44231569	44220539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44222565_44224802_44225089_44225174_44225309_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ENSMUSG00000032120.12_1	chr9	-	3426	15	FSM	ENSMUSG00000032120.12	ENST00000336702.7	3436	15	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATATCTCTATCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	44231532	44220640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44220702_44221458_44222565_44224802_44225089_44225174_44225312_44225451_44225554_44226176_44226352_44226443_44226572_44226660_44226726_44227402_44227512_44227602_44227715_44227807_44227925_44228004_44228116_44228296_44228417_44228879_44228976_44230831
ENSMUSG00000032121.10_0	chr9	+	2604	4	FSM	ENSMUSG00000032121.10	ENSMUST00000034632.10	2619	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGGAGGGAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	37119527	37135990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37119702_37129561_37129673_37130497_37130601_37133774
ENSMUSG00000032121.10_1	chr9	+	275	3	FSM	ENSMUSG00000032121.10	ENST00000529609.5	291	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCACTGAGGTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	37129567	37133888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37129673_37130544_37130601_37133774
ENSMUSG00000032121.10_2	chr9	+	732	4	FSM	ENSMUSG00000032121.10	ENST00000528724.5	746	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGAGTTTTGGGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37129570	37134219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37129673_37130284_37130367_37130497_37130601_37133774
ENSMUSG00000032122.16_0	chr9	-	5925	18	FSM	ENSMUSG00000032122.16	ENSMUST00000115068.10	5943	18	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTATGACATATGCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	37167017	37138881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37142953_37144605_37144671_37144915_37145014_37145137_37145217_37145453_37145528_37145688_37145738_37146380_37146467_37146776_37146840_37148174_37148266_37148595_37148749_37149032_37149071_37149511_37149679_37150426_37150504_37150914_37151051_37152387_37152467_37152584_37152679_37153174_37153257_37166594
ENSMUSG00000032123.6_0	chr9	+	2183	9	FSM	ENSMUSG00000032123.6	ENSMUST00000054708.5	2205	9	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAAAAGATCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	44238152	44245186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44238503_44238848_44238970_44239249_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032123.6_8	chr9	+	1310	9	FSM	ENSMUSG00000032123.6	ENST00000639704.1	1324	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTTGTTCTCAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44238265	44244519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44238503_44238848_44238970_44239342_44239464_44240287_44240435_44242414_44242500_44243200_44243390_44243859_44243948_44244112_44244269_44244353
ENSMUSG00000032126.17_0	chr9	-	1590	14	FSM	ENSMUSG00000032126.17	ENSMUST00000077353.15	1605	14	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGAGACCTTTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	44255516	44247641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314_44253369_44255306
ENSMUSG00000032126.17_11	chr9	-	1199	11	FSM	ENSMUSG00000032126.17	ENST00000543090.5	1212	11	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCACTAATAAACCAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	44252995	44247729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248652_44248773_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922
ENSMUSG00000032126.17_4	chr9	-	1182	12	FSM	ENSMUSG00000032126.17	ENST00000542729.5	1191	12	0	9	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTAGAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44253369	44247720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922_44252996_44253314
ENSMUSG00000032126.17_5	chr9	-	1124	11	FSM	ENSMUSG00000032126.17	ENST00000544387.5	1140	11	7	9	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTAGAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44252992	44247720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511_44252562_44252922
ENSMUSG00000032126.17_6	chr9	-	1054	10	ISM	ENSMUSG00000032126.17	ENST00000544387.5	1140	11	438	9	435	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTAGAATGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	44252561	44247720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_44248143_44248222_44248310_44248414_44248469_44248948_44248988_44249211_44249326_44250774_44250851_44250944_44251023_44251984_44252063_44252372_44252429_44252511
ENSMUSG00000032127.10_1	chr9	-	3518	16	FSM	ENSMUSG00000032127.10	ENSMUST00000034644.10	3536	16	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCGCTGCCTTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	44272955	44259051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44259882_44260199_44260423_44263893_44264066_44264205_44264409_44264511_44264652_44265133_44265296_44265399_44265589_44265705_44265853_44266260_44266448_44266995_44267148_44267524_44267727_44269365_44269614_44270434_44270599_44270908_44271045_44271135_44271285_44272741
ENSMUSG00000032131.17_0	chr9	-	3554	15	FSM	ENSMUSG00000032131.17	ENST00000619701.5	3572	15	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGTATGCAGGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	44199515	44184492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44186155_44186312_44186432_44186546_44186706_44188754_44188856_44188954_44189124_44189328_44189428_44190268_44190412_44190599_44190715_44190831_44190956_44192378_44192525_44192693_44192745_44192855_44192989_44193100_44193219_44198512_44198777_44199364
ENSMUSG00000032135.16_0	chr9	+	2982	16	FSM	ENSMUSG00000032135.16	ENSMUST00000034650.15	2989	16	0	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGATGCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44045858	44054017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44052571_44052690_44053080
ENSMUSG00000032135.16_2	chr9	+	2768	15	FSM	ENSMUSG00000032135.16	ENSMUST00000098852.3	2772	15	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCATGATGCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	44045954	44054017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44046054_44047814_44047946_44048034_44048243_44048335_44048407_44048514_44048603_44050131_44050312_44050454_44050577_44050696_44050860_44050949_44051069_44051156_44051299_44051433_44051556_44051658_44051801_44051894_44051991_44052141_44052290_44053080
ENSMUSG00000032171.8_0	chr9	+	3832	4	FSM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGAGGTTTGTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20563397	20577876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20563494_20566657_20566877_20573593_20573705_20574470
ENSMUSG00000032171.8_3	chr9	+	3739	3	ISM	ENSMUSG00000032171.8	ENSMUST00000034689.8	3843	4	3264	4	3264	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAGAGGTTTGTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	20566654	20577876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_20566877_20573593_20573705_20574470
ENSMUSG00000032175.12_1	chr9	-	4763	25	FSM	ENSMUSG00000032175.12	ENSMUST00000214454.2	4770	25	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTGTTTTGGTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	21042537	21015370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21032000_21032687_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419_21038640_21039855_21040008_21042467
ENSMUSG00000032175.12_10	chr9	-	3069	20	FSM	ENSMUSG00000032175.12	ENST00000524462.5	3080	20	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCAAAGGCATCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21035427	21016345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272
ENSMUSG00000032175.12_9	chr9	-	3476	23	FSM	ENSMUSG00000032175.12	ENST00000264818.10	3485	23	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTCAAAGGCATCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	21038551	21016345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21016480_21016559_21016671_21018778_21018897_21019160_21019334_21020069_21020189_21020530_21020724_21021429_21021528_21021747_21021899_21022301_21022457_21022540_21022677_21025488_21025617_21026487_21026576_21026667_21026845_21026939_21027044_21027130_21027327_21027428_21027538_21031555_21031714_21031798_21031991_21032680_21033055_21035272_21035437_21035706_21035855_21036159_21036278_21038419
ENSMUSG00000032177.18_0	chr9	+	4650	15	FSM	ENSMUSG00000032177.18	ENSMUST00000039413.15	4653	15	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTGTTTCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	21077011	21124543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21077529_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ENSMUSG00000032177.18_1	chr9	+	2291	15	FSM	ENSMUSG00000032177.18	ENST00000293683.9	2294	15	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTTCCCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	21093058	21122639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21093121_21102622_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ENSMUSG00000032177.18_6	chr9	+	2224	14	ISM	ENSMUSG00000032177.18	ENSMUST00000115458.9	2962	15	7229	284	-5373	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTTTTCCCTTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	21102627	21122639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_21102815_21103690_21103728_21103815_21103887_21105870_21105921_21106041_21106155_21109888_21109983_21112516_21112714_21114493_21114593_21114683_21114849_21115619_21115720_21116265_21116421_21116586_21116710_21117440_21117624_21121989
ENSMUSG00000032178.15_1	chr9	+	3602	20	FSM	ENSMUSG00000032178.15	ENST00000449870.5	3616	20	11	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGGAAGAGGGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	21279160	21316691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310408_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_11	chr9	+	3517	20	FSM	ENSMUSG00000032178.15	ENSMUST00000067646.12	3549	20	9	23	9	16	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGATAAATAAAAGAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	21279175	21316633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032178.15_25	chr9	+	3481	21	FSM	ENSMUSG00000032178.15	ENSMUST00000213518.2	3513	21	10	22	-7	18	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAATAAAAGAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	21279243	21316635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315479_21315991
ENSMUSG00000032178.15_34	chr9	+	3660	19	FSM	ENSMUSG00000032178.15	ENSMUST00000216892.2	3684	19	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAGTAATGAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	21279264	21313080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21279396_21298995_21299094_21299407_21299447_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUSG00000032178.15_41	chr9	+	3597	18	FSM	ENSMUSG00000032178.15	ENSMUST00000115414.3	3606	18	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTTGAGTCTTCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21279307	21313099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21279396_21298995_21299094_21299819_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310420_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21311747
ENSMUSG00000032178.15_51	chr9	+	2686	18	FSM	ENSMUSG00000032178.15	ENST00000588657.5	2707	18	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACAGATAAAGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	21299828	21316117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21300050_21300601_21300780_21303590_21303739_21305006_21305099_21305490_21305587_21306126_21306239_21306666_21306765_21307315_21307428_21307512_21307624_21308764_21308965_21309264_21309433_21310408_21310547_21310711_21310889_21310980_21311138_21311255_21311310_21314431_21314798_21315355_21315488_21315991
ENSMUSG00000032179.8_0	chr9	+	3805	7	FSM	ENSMUSG00000032179.8	ENSMUST00000012281.8	3822	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGTCAATCTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	75682654	75807584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_75683865_75735299_75735493_75746826_75746976_75780536_75780732_75793919_75793997_75800975_75801087_75805714
ENSMUSG00000032180.12_0	chr9	-	1357	4	FSM	ENSMUSG00000032180.12	ENSMUST00000034698.9	1378	4	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGTTAATAGTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	21421537	21418860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21419688_21420226_21420411_21420549_21420648_21421289
ENSMUSG00000032181.8_0	chr9	-	1882	11	FSM	ENSMUSG00000032181.8	ENST00000542355.6	1896	11	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGTTGAACATAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75591249	75550830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75551227_75558912_75558994_75568534_75568673_75570474_75570559_75572935_75573053_75576496_75576675_75582626_75582777_75583950_75584094_75589245_75589462_75589555_75589602_75590916
ENSMUSG00000032182.16_0	chr9	-	1879	10	FSM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	0	15	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAGCAGCATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	21504068	21499992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504032
ENSMUSG00000032182.16_1	chr9	-	1825	9	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	190	27	190	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21503878	21500004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ENSMUSG00000032182.16_2	chr9	-	2137	8	FSM	ENSMUSG00000032182.16	ENSMUST00000034700.15	2174	8	18	19	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAAAAGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21504106	21499996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823
ENSMUSG00000032182.16_3	chr9	-	1851	9	FSM	ENSMUSG00000032182.16	ENSMUST00000213809.2	1883	9	9	23	3	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21504103	21500004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21504022
ENSMUSG00000032182.16_4	chr9	-	1779	8	ISM	ENSMUSG00000032182.16	ENSMUST00000078572.9	1894	10	553	19	553	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAAAAAAGCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	21503515	21499996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_21500855_21500930_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356
ENSMUSG00000032182.16_5	chr9	-	1985	9	FSM	ENSMUSG00000032182.16	ENSMUST00000180365.9	2014	9	6	23	6	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21504100	21500004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21501057_21501141_21501325_21501406_21501574_21501651_21501769_21502722_21502811_21503195_21503277_21503356_21503515_21503823_21503885_21504022
ENSMUSG00000032184.6_0	chr9	+	1170	3	FSM	ENSMUSG00000032184.6	ENSMUST00000034702.6	1189	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGAGCCTTCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	75533035	75545047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_75533320_75542667_75543000_75544493
ENSMUSG00000032185.16_0	chr9	+	3206	16	FSM	ENSMUSG00000032185.16	ENSMUST00000034703.15	3220	16	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGCCTGCAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	21458196	21500756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499146_21499216_21499344
ENSMUSG00000032185.16_1	chr9	+	3138	15	FSM	ENSMUSG00000032185.16	ENSMUST00000115395.10	3152	15	8	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTAGTCTCCAGGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	21458216	21500777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21458527_21480750_21480877_21485782_21485890_21486709_21486815_21490694_21490806_21491604_21491783_21494334_21494426_21494806_21494889_21497462_21497549_21497740_21497831_21498196_21498335_21498420_21498511_21498586_21498700_21498803_21498882_21499344
ENSMUSG00000032186.16_0	chr9	-	9851	10	FSM	ENSMUSG00000032186.16	ENSMUST00000098552.10	9871	10	5	15	5	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTAAATGTAAACGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75518580	75472917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75489111_75489220_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491_75504685_75518305
ENSMUSG00000032186.16_3	chr9	-	1405	8	FSM	ENSMUSG00000032186.16	ENST00000435126.6	1420	8	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGGAACATGGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	75504672	75480968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75481406_75483927_75484073_75484390_75484535_75493329_75493461_75495171_75495259_75499844_75499968_75502202_75502360_75504491
ENSMUSG00000032187.17_0	chr9	+	5444	34	FSM	ENSMUSG00000032187.17	ENSMUST00000034707.15	6354	34	35	875	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTAAAGCAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	21527499	21614638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_25	chr9	+	5372	34	FSM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	9	24	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTAAAGCAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	21527568	21614638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_3	chr9	+	6374	34	FSM	ENSMUSG00000032187.17	ENSMUST00000098948.10	6376	34	2	0	2	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTGCCTATAAGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	21527466	21615526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21527697_21544100_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597308_21597572_21611095_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032187.17_75	chr9	+	5232	33	ISM	ENSMUSG00000032187.17	ENSMUST00000174008.8	5405	34	16553	24	12	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTAAAGCAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	21544112	21614638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_21544351_21546045_21546179_21546831_21547237_21547478_21547578_21548574_21548834_21550009_21550137_21550513_21550688_21552207_21552382_21553720_21553889_21553996_21554048_21558646_21558778_21558913_21558972_21566922_21567045_21570121_21570273_21572003_21572168_21576144_21576212_21577059_21577171_21578461_21578705_21580230_21580345_21580844_21580953_21581779_21581867_21583338_21583386_21584465_21584633_21586362_21586527_21588745_21588974_21589611_21589690_21590224_21590444_21597317_21597572_21611098_21611205_21611331_21611434_21612149_21612283_21612383_21612527_21614231
ENSMUSG00000032192.10_2	chr9	+	2093	11	FSM	ENSMUSG00000032192.10	ENSMUST00000215875.2	2105	11	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGGGGTATCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75221429	75253153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_75221666_75234414_75234552_75239154_75239197_75240090_75240168_75241450_75241584_75242932_75243077_75244552_75244645_75247469_75247519_75250789_75250887_75251762_75251930_75252234
ENSMUSG00000032193.10_0	chr9	+	4616	18	FSM	ENSMUSG00000032193.10	ENSMUST00000034713.9	4627	18	8	3	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTGTCATCCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	21634786	21661212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21655525_21655682_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032193.10_5	chr9	+	4311	17	FSM	ENSMUSG00000032193.10	ENSMUST00000213114.2	4318	17	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTTGTCATCCTTATG	NA	NA	NA	NA	NA	NA	NA	NA	21634934	21661211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21635141_21643042_21643166_21643607_21643731_21644786_21645171_21646532_21646656_21648515_21648639_21649169_21649290_21650150_21650277_21650681_21650854_21650944_21651170_21653482_21653602_21653952_21654093_21655217_21655360_21657027_21657202_21657657_21657736_21658444_21658603_21659436
ENSMUSG00000032194.10_0	chr9	-	5005	12	FSM	ENSMUSG00000032194.10	ENSMUST00000034717.7	5040	12	18	17	18	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCTACAAATAAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	21710022	21678096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707491_21709777
ENSMUSG00000032194.10_2	chr9	-	4994	12	NNC	ENSMUSG00000032194.10	novel	5040	12	NA	NA	25	-20	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAGCTACAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21710015	21678099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_21680301_21681049_21681140_21681221_21681423_21684040_21684184_21685828_21686049_21686996_21687085_21690996_21691234_21691674_21691766_21691855_21692000_21705752_21706980_21707375_21707486_21709773
ENSMUSG00000032198.10_1	chr9	-	6871	50	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	3	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATTTTTTTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21763928	21711161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUSG00000032198.10_15	chr9	-	6450	49	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	9	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACAACCTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21763922	21711483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUSG00000032198.10_16	chr9	-	6433	48	NNC	ENSMUSG00000032198.10	novel	6467	49	NA	NA	11	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACAACCTGTGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21763920	21711483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480_21758569_21763840
ENSMUSG00000032198.10_2	chr9	-	6779	49	NNC	ENSMUSG00000032198.10	novel	6880	50	NA	NA	5367	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTATTTTTTTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	21758564	21711161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_21711696_21712466_21712629_21712817_21712925_21713020_21713165_21713648_21713886_21714109_21714200_21714288_21714415_21715905_21715921_21716014_21716147_21720816_21720961_21721043_21721237_21723069_21723171_21724247_21724407_21724680_21724834_21725764_21725900_21726006_21726104_21727196_21727282_21727608_21727736_21728578_21728762_21729108_21729270_21731558_21731729_21731817_21731958_21732751_21732923_21733030_21733145_21735692_21735834_21736730_21736827_21737078_21737172_21740769_21740875_21741509_21741674_21742328_21742491_21742707_21742940_21743149_21743233_21744135_21744242_21744330_21744470_21744659_21744731_21744819_21744938_21750046_21750210_21750438_21750533_21750648_21750777_21750920_21751069_21751167_21751249_21752788_21752939_21753205_21753273_21754228_21754315_21755502_21755716_21756739_21756870_21757056_21757126_21757794_21757971_21758480
ENSMUSG00000032199.14_0	chr9	-	2189	4	FSM	ENSMUSG00000032199.14	ENSMUST00000034720.12	2200	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5761	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTGAGTTTCCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	71393207	71385719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71386823_71388623_71388829_71390448_71391088_71392965
ENSMUSG00000032202.12_0	chr9	+	2964	6	FSM	ENSMUSG00000032202.12	ENSMUST00000034722.5	2979	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATAATAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72952145	73004866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72952294_72982674_72982850_72989683_72989770_72992212_72992317_72994358_72994483_73002539
ENSMUSG00000032207.11_0	chr9	-	1839	10	FSM	ENSMUSG00000032207.11	ENST00000299022.10	1846	10	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAAAGGAATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	70841821	70705046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70705229_70705403_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70727825_70730654_70730846_70841757
ENSMUSG00000032207.11_1	chr9	-	1776	9	ISM	ENSMUSG00000032207.11	ENST00000299022.10	1846	10	110977	5	110977	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCACAAAGGAATCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	70730846	70705046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_70705229_70705403_70705691_70709354_70709574_70710978_70711097_70719951_70720195_70723811_70724046_70726130_70726249_70727641_70727825_70730654
ENSMUSG00000032212.11_0	chr9	+	3746	21	FSM	ENSMUSG00000032212.11	ENSMUST00000216816.2	3755	21	6	3	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTGCTAATGTATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	70450041	70499513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480792_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032212.11_18	chr9	+	3679	21	FSM	ENSMUSG00000032212.11	ENSMUST00000049263.9	3691	21	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTGCTAATGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	70450161	70499512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70450364_70451251_70451340_70466318_70466384_70469057_70469256_70470095_70470144_70479430_70479459_70480738_70481208_70481857_70481908_70484003_70484123_70486563_70486714_70487233_70487338_70487448_70487613_70488064_70488151_70488582_70488747_70491213_70491395_70492034_70492160_70493205_70493371_70493916_70494232_70494332_70494478_70496238_70496400_70498860
ENSMUSG00000032215.16_0	chr9	+	1527	6	FSM	ENSMUSG00000032215.16	ENSMUST00000034738.14	1543	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGCATGCCTACATATC	NA	NA	NA	NA	NA	NA	NA	NA	73020737	73030607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_73020866_73022169_73022284_73023688_73023762_73025163_73025228_73028483_73028570_73029545
ENSMUSG00000032216.16_0	chr9	+	5479	29	FSM	ENSMUSG00000032216.16	ENSMUST00000034740.15	5499	29	10	10	10	-10	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	3637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72569637	72657124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72569896_72577233_72577399_72578511_72578586_72584596_72584676_72584774_72584814_72593342_72593397_72616393_72616445_72617759_72617822_72619448_72619549_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_101	chr9	+	6017	21	FSM	ENSMUSG00000032216.16	ENSMUST00000238315.2	6035	21	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAAAGCTGTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72600728	72657124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72602149_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032216.16_86	chr9	+	4943	22	FSM	ENSMUSG00000032216.16	ENST00000338963.6	4959	22	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACAGGTGGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	72600442	72655564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72602149_72625499_72625667_72628582_72628701_72628778_72628944_72632298_72632365_72633692_72633813_72635548_72635749_72638183_72638256_72638503_72638559_72638659_72638719_72639873_72639940_72642291_72642522_72643948_72644071_72644155_72644227_72646321_72646418_72646736_72646811_72647449_72647511_72648909_72648970_72649934_72650043_72650821_72650919_72653688_72653762_72654407
ENSMUSG00000032217.14_0	chr9	-	4851	15	FSM	ENSMUSG00000032217.14	ENSMUST00000034739.12	4880	15	22	7	22	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTATTGTCTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70410985	70332717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70334390_70336833_70336962_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357824_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221_70410285_70410740
ENSMUSG00000032217.14_1	chr9	-	4948	14	FSM	ENSMUSG00000032217.14	ENSMUST00000213647.2	4961	14	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTCTATTGTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70410655	70332719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70334390_70336833_70336938_70338212_70338309_70339218_70339312_70348036_70348164_70349553_70349680_70350683_70351033_70357567_70357821_70360782_70361100_70365105_70365301_70366271_70366436_70376636_70376764_70383057_70383951_70410221
ENSMUSG00000032218.8_0	chr9	-	1515	9	FSM	ENSMUSG00000032218.8	ENSMUST00000034742.8	1531	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACTTAAGGTATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70328819	70314979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70315312_70316561_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032218.8_11	chr9	-	1092	8	ISM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	2324	0	2324	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70326398	70315215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_70315255_70316557_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282
ENSMUSG00000032218.8_12	chr9	-	1129	9	FSM	ENSMUSG00000032218.8	ENST00000621385.1	1129	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCAGCCCCTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	70328722	70315215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70315255_70316557_70316673_70317402_70317544_70317936_70318174_70320123_70320283_70320383_70320555_70326075_70326190_70326282_70326412_70328698
ENSMUSG00000032220.11_0	chr9	+	4609	28	FSM	ENSMUSG00000032220.11	ENSMUST00000034745.9	4625	28	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCAATGCCTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70114658	70307041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70114986_70194193_70194338_70204548_70204639_70208974_70209070_70223873_70223962_70227350_70227441_70229673_70229806_70232114_70232250_70234425_70234559_70242396_70242594_70245010_70245092_70245998_70246086_70248562_70248650_70249263_70249432_70250325_70250412_70253968_70254051_70260541_70260649_70266566_70266666_70269504_70269650_70274897_70275013_70275950_70276121_70277638_70277785_70283785_70283933_70285492_70285651_70286002_70286093_70291085_70291288_70303057_70303228_70306003
ENSMUSG00000032221.15_0	chr9	+	5228	10	FSM	ENSMUSG00000032221.15	ENSMUST00000034746.10	5250	10	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAAATATAACATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	72345829	72369298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72345962_72346521_72346744_72352124_72352253_72353488_72353592_72355810_72356041_72356432_72356650_72356733_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000032228.17_0	chr9	-	6278	21	FSM	ENSMUSG00000032228.17	ENSMUST00000183404.8	6299	21	17	4	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGTGGCTGAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	72019112	71749973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71776280_71776353_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ENSMUSG00000032228.17_26	chr9	-	1561	12	FSM	ENSMUSG00000032228.17	ENST00000537840.5	1580	12	9	10	-8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGGAGAAGAAAAAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71803341	71753752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71792464_71792571_71803211
ENSMUSG00000032228.17_3	chr9	-	4599	20	FSM	ENSMUSG00000032228.17	ENSMUST00000034755.13	4621	20	11	11	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAGTAAACTAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72019092	71751560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71824286_71824340_71829933_71830070_71851235_71851301_71907697_71907801_71922919_71922994_72016957_72017031_72018019_72018117_72018857
ENSMUSG00000032228.17_6	chr9	-	3873	13	FSM	ENSMUSG00000032228.17	ENST00000343827.7	3884	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACATAGTAAACTAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	71803322	71751561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71753843_71757053_71757208_71763586_71763820_71765765_71765929_71766121_71766237_71775353_71775561_71777355_71777430_71783270_71783350_71789998_71790064_71790388_71790534_71790937_71791078_71792464_71792571_71803211
ENSMUSG00000032231.15_0	chr9	+	1427	13	FSM	ENSMUSG00000032231.15	ENSMUST00000034756.15	1447	13	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	50039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACAAGAATGCCGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	69360910	69399066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69361022_69371741_69371807_69374572_69374673_69383334_69383430_69386959_69387074_69390255_69390347_69391061_69391142_69392479_69392540_69393751_69393846_69394834_69394931_69395336_69395396_69396933_69397057_69398727
ENSMUSG00000032232.15_0	chr9	-	6536	18	FSM	ENSMUSG00000032232.15	ENSMUST00000121322.8	6541	18	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAATCCTGGCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71678884	71533795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
ENSMUSG00000032232.15_1	chr9	-	6737	19	FSM	ENSMUSG00000032232.15	ENSMUST00000072899.9	6754	19	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAATCCTGGCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71678872	71533795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678790
ENSMUSG00000032232.15_3	chr9	-	4459	19	FSM	ENSMUSG00000032232.15	ENSMUST00000122065.2	4487	19	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAGACAGAGTAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	71678821	71536499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71536675_71537757_71537922_71538143_71538253_71539012_71539138_71539879_71539964_71548640_71548731_71552773_71552936_71557503_71557675_71558515_71558669_71562574_71562680_71563327_71563535_71612429_71612643_71622604_71622741_71623689_71623839_71624677_71624780_71628877_71628984_71630815_71630911_71631759_71633365_71678313
ENSMUSG00000032235.16_2	chr9	+	2653	15	FSM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	6	16	6	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGGAAAATAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69307774	69339430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69307864_69314546_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ENSMUSG00000032235.16_33	chr9	+	2568	14	ISM	ENSMUSG00000032235.16	ENST00000483823.1	2675	15	6774	16	6774	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGGAAAATAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	69314542	69339430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_69314649_69315541_69315662_69317393_69317532_69318054_69318172_69318588_69318749_69319483_69319666_69322619_69322812_69322899_69323644_69324215_69324392_69328942_69329073_69332938_69333024_69334132_69334184_69335597_69335857_69339322
ENSMUSG00000032238.18_0	chr9	+	2546	10	FSM	ENSMUSG00000032238.18	ENSMUST00000113624.3	2591	10	22	23	22	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAAAACAAAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69196985	69287068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69197331_69255413_69255500_69269020_69269163_69271447_69271844_69278496_69278619_69280370_69280504_69281296_69281405_69282666_69282778_69284059_69284173_69286078
ENSMUSG00000032239.11_0	chr9	-	1118	6	FSM	ENSMUSG00000032239.11	ENSMUST00000034763.10	1134	6	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAGTCATTATTAATA	NA	NA	NA	NA	NA	NA	NA	NA	22379631	22359609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22360151_22361097_22361160_22365074_22365167_22368668_22368799_22370006_22370038_22379369
ENSMUSG00000032243.9_0	chr9	+	4964	30	FSM	ENSMUSG00000032243.9	ENSMUST00000034774.9	4969	30	4	1	4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGCAAGGCTGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	62585111	62691263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62585279_62604165_62604278_62634887_62634989_62637992_62638085_62639363_62639479_62642550_62642679_62644650_62644800_62651207_62651353_62651763_62651930_62653187_62653259_62658786_62658932_62659525_62659675_62662453_62662595_62662851_62663056_62664886_62665018_62667569_62667737_62668812_62668956_62670088_62670200_62673041_62673128_62674877_62675086_62675808_62675908_62676528_62676606_62678626_62678717_62680241_62680333_62681358_62681473_62681579_62681667_62683894_62684006_62684135_62684232_62689217_62689332_62689909
ENSMUSG00000032244.10_0	chr9	-	6765	2	FSM	ENSMUSG00000032244.10	ENSMUST00000034775.10	6785	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTACCTTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	62719207	62699113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_62705011_62718339
ENSMUSG00000032245.13_0	chr9	+	2125	7	FSM	ENSMUSG00000032245.13	ENSMUST00000034776.13	2142	7	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGGCCGTGGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	62746079	62759284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754437_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_1	chr9	+	308	4	FSM	ENSMUSG00000032245.13	ENST00000636314.1	328	4	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCTGCTCCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62746166	62756473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62746237_62753235_62753335_62754866_62754923_62756390
ENSMUSG00000032245.13_2	chr9	+	765	7	FSM	ENSMUSG00000032245.13	ENST00000564752.1	772	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCGCAGGCGCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	62746151	62757975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754247_62754458_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_3	chr9	+	726	6	FSM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCAACAGTGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62746159	62758154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62746237_62751851_62751967_62753235_62753335_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_4	chr9	+	631	5	FSM	ENSMUSG00000032245.13	ENST00000637494.1	642	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCAACAGTGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62746155	62758154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62746237_62751851_62751967_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_7	chr9	+	656	5	ISM	ENSMUSG00000032245.13	ENST00000566347.5	741	6	5696	4	5696	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAACAGTGAGGCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	62751847	62758157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_62751967_62753235_62753335_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032245.13_9	chr9	+	551	4	ISM	ENSMUSG00000032245.13	ENST00000637494.1	642	5	5699	7	5699	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCAACAGTGAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	62751850	62758154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_62751967_62754866_62754923_62756390_62756514_62757898
ENSMUSG00000032246.15_0	chr9	+	854	5	FSM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	4	6	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTGGAATTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62765389	62783197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62765444_62765523_62765555_62775958_62776100_62778547_62778737_62782758
ENSMUSG00000032246.15_1	chr9	+	800	4	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	138	6	108	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCATGTGGAATTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62765523	62783197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_62765555_62775958_62776100_62778547_62778737_62782758
ENSMUSG00000032246.15_2	chr9	+	764	3	ISM	ENSMUSG00000032246.15	ENSMUST00000034777.14	864	5	10572	12	10542	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTCAAAGCATGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	62775957	62783191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_62776100_62778547_62778737_62782758
ENSMUSG00000032249.15_0	chr9	+	2085	7	FSM	ENSMUSG00000032249.15	ENSMUST00000085519.13	2113	7	27	1	27	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTTCCTTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62248637	62286093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_62248837_62279001_62279152_62279343_62279467_62280766_62280960_62281935_62282034_62284581_62284646_62284835
ENSMUSG00000032251.13_1	chr9	+	2146	4	FSM	ENSMUSG00000032251.13	ENSMUST00000113245.9	2158	4	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTACAGCGATGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	82711600	82729736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_82712393_82719470_82719537_82728351_82728483_82728579
ENSMUSG00000032252.15_0	chr9	-	4824	5	FSM	ENSMUSG00000032252.15	ENSMUST00000185675.7	4850	5	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTCGAAAAGAAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	62029880	61964543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_61968318_61975666_61975913_61977296_61977896_61995710_61995802_62029766
ENSMUSG00000032252.15_1	chr9	-	4590	3	FSM	ENSMUSG00000032252.15	ENSMUST00000034785.8	4626	3	22	14	22	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTCGAAAAGAAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	61977866	61964543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_61968318_61975666_61975913_61977296
ENSMUSG00000032253.14_1	chr9	-	10744	40	FSM	ENSMUSG00000032253.14	ENSMUST00000034787.12	10756	40	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTACTTAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	82857557	82748211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_82753915_82757342_82757541_82758061_82758322_82758778_82758943_82759242_82759396_82762164_82762315_82763373_82763425_82763722_82763793_82766885_82767012_82768674_82768796_82769566_82769723_82772166_82772229_82772413_82772526_82775375_82775459_82775577_82775703_82776286_82776395_82778074_82778195_82782674_82782907_82785176_82785254_82787701_82787843_82788993_82789112_82790743_82790928_82791839_82791978_82795740_82795967_82797348_82797478_82808449_82808585_82809087_82809242_82810152_82810252_82810881_82810923_82811027_82811129_82812356_82812428_82814538_82814640_82814898_82815121_82827810_82827972_82841564_82841664_82841753_82841905_82856726_82856787_82856979_82857010_82857140_82857200_82857304
ENSMUSG00000032254.11_0	chr9	-	3377	23	FSM	ENSMUSG00000032254.11	ENSMUST00000034815.9	3398	23	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATGCAAACTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	61854044	61824570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_61824962_61826181_61826253_61826893_61826976_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711_61844818_61851484_61851614_61852631_61852702_61853893
ENSMUSG00000032254.11_14	chr9	-	2619	19	FSM	ENSMUSG00000032254.11	ENST00000395392.6	2636	19	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCCAAGTGAGCACTAT	NA	NA	NA	NA	NA	NA	NA	NA	61844812	61826190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_61826253_61826893_61826973_61827156_61827240_61828300_61828529_61831186_61831499_61831913_61832094_61832251_61832426_61832811_61832970_61833641_61833801_61834318_61834446_61834629_61834750_61834835_61834916_61836945_61837049_61839082_61839205_61839356_61839470_61842661_61842833_61843944_61844055_61844363_61844501_61844711
ENSMUSG00000032257.7_0	chr9	-	2216	7	FSM	ENSMUSG00000032257.7	ENST00000303941.4	2232	7	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGAACCCCAGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	49338218	49326882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_49328151_49329932_49330080_49330665_49330822_49331290_49331341_49331624_49331777_49332966_49333262_49338070
ENSMUSG00000032258.16_0	chr9	-	2001	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034793.15	2001	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAATAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	83323180	83273416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_83273927_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83323093
ENSMUSG00000032258.16_1	chr9	-	4138	8	FSM	ENSMUSG00000032258.16	ENSMUST00000034791.15	4160	8	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACACTGGGATCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	83323065	83275478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_83278109_83280564_83280695_83281678_83281822_83282655_83282750_83283664_83283803_83305075_83305606_83308645_83309015_83322961
ENSMUSG00000032262.14_0	chr9	-	2982	6	FSM	ENSMUSG00000032262.14	ENSMUST00000034796.14	3001	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGACTCTGTCCGTCG	NA	NA	NA	NA	NA	NA	NA	NA	83688294	83660752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_83662863_83665188_83665317_83667087_83667260_83670321_83670403_83672029_83672218_83687991
ENSMUSG00000032263.15_0	chr9	+	1461	11	FSM	ENSMUSG00000032263.15	ENSMUST00000034801.11	1472	11	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGTGTGTGTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83807213	84006292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_83807413_83834576_83834655_83835765_83835835_83870828_83870963_83871193_83871350_83873766_83873876_83892306_83892405_83894561_83894673_83951157_83951245_84004286_84004436_84006021
ENSMUSG00000032264.10_1	chr9	+	2845	16	FSM	ENSMUSG00000032264.10	ENSMUST00000034803.10	2863	16	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGAGAGTGAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	48966923	48990065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_48967088_48968942_48969078_48971869_48971972_48972167_48972246_48972354_48972515_48973492_48973646_48975309_48975502_48977978_48978143_48979959_48980143_48980873_48981113_48982881_48982954_48984502_48984673_48985318_48985450_48986204_48986337_48988751_48988955_48989498
ENSMUSG00000032265.15_0	chr9	-	5610	3	FSM	ENSMUSG00000032265.15	ENSMUST00000187711.2	5648	3	33	5	33	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATCTGTGTCTGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	85209368	85202496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_85207287_85208311_85208859_85209095
ENSMUSG00000032267.9_0	chr9	+	4126	24	FSM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTGGTATGTAGCATGA	NA	NA	NA	NA	NA	NA	NA	NA	48896765	48953804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_48896838_48911650_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUSG00000032267.9_4	chr9	+	4061	23	ISM	ENSMUSG00000032267.9	ENSMUST00000047349.8	4133	24	14885	0	14885	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGTAGCATGACCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	48911649	48953810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_48911729_48912807_48912941_48914290_48914397_48915122_48915283_48919728_48919816_48920395_48920534_48921542_48921617_48922562_48922643_48926401_48926551_48927981_48928110_48929671_48929768_48935205_48935386_48937067_48937289_48938118_48938190_48939372_48939602_48942026_48942222_48943513_48943654_48946892_48947072_48947181_48947261_48948476_48948557_48949067_48949192_48950281_48950478_48952673
ENSMUSG00000032268.14_0	chr9	+	995	7	FSM	ENSMUSG00000032268.14	ENST00000299882.11	1011	7	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGCAGGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49020309	49026906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_49020438_49020641_49020783_49023487_49023651_49024423_49024603_49025793_49025893_49026332_49026476_49026764
ENSMUSG00000032268.14_2	chr9	+	808	6	FSM	ENSMUSG00000032268.14	ENST00000544476.1	821	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGTGCAGGTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49020306	49026906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_49020438_49020641_49020756_49024423_49024603_49025793_49025893_49026332_49026476_49026764
ENSMUSG00000032269.9_0	chr9	-	1711	9	FSM	ENSMUSG00000032269.9	ENST00000375498.6	1725	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATAAGTATGGGGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	48822501	48810952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48811291_48811860_48812083_48812173_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032269.9_1	chr9	-	1799	8	FSM	ENSMUSG00000032269.9	ENST00000355556.6	1816	8	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATAAGTATGGGGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	48822498	48810952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48811291_48811860_48812385_48812717_48812879_48815876_48816047_48817582_48817693_48818653_48818699_48819894_48820039_48822191
ENSMUSG00000032271.14_0	chr9	-	1024	3	FSM	ENSMUSG00000032271.14	ENSMUST00000034808.12	1043	3	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAGTGCTCACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	48516434	48503176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48503663_48514653_48514862_48516104
ENSMUSG00000032279.12_0	chr9	+	2562	11	FSM	ENSMUSG00000032279.12	ENSMUST00000217484.2	2580	11	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTGACTGAGGCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	54493627	54511937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54493828_54497141_54497205_54499677_54499762_54502449_54502565_54503285_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_19	chr9	+	1409	9	ISM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	2543	13	2543	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATGGAAATAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	54499682	54511157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54499762_54502449_54502565_54503390_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032279.12_7	chr9	+	1477	10	FSM	ENSMUSG00000032279.12	ENST00000558554.5	1492	10	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATATGGAAATAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	54497141	54511157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54497205_54499677_54499762_54502449_54502565_54503390_54503474_54504118_54504253_54505676_54505780_54505882_54505948_54506876_54506962_54508345_54508499_54510565
ENSMUSG00000032280.17_8	chr9	+	1521	9	FSM	ENSMUSG00000032280.17	ENST00000559191.5	1536	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGATTTCTCTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	61279708	61324217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_61279906_61317356_61317403_61318544_61318622_61319546_61319797_61320136_61320385_61321224_61321373_61321992_61322144_61322843_61322921_61323890
ENSMUSG00000032281.12_0	chr9	-	2861	14	FSM	ENSMUSG00000032281.12	ENSMUST00000034822.12	2880	14	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTACCGGATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54569143	54512168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54512761_54516299_54516547_54516978_54517119_54522019_54522238_54523150_54523382_54525305_54525488_54529149_54529327_54529720_54529871_54529959_54530041_54534714_54534836_54535153_54535243_54535689_54535911_54549879_54549981_54568832
ENSMUSG00000032285.16_3	chr9	+	922	3	FSM	ENSMUSG00000032285.16	ENST00000489435.2	934	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCATTATACCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	54606508	54608302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54606698_54607005_54607145_54607708
ENSMUSG00000032285.16_6	chr9	+	2880	7	FSM	ENSMUSG00000032285.16	ENSMUST00000070070.8	3003	7	117	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGACAAATGGCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54606959	54623593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54607145_54613346_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ENSMUSG00000032285.16_9	chr9	+	1282	6	ISM	ENSMUSG00000032285.16	ENSMUST00000120452.8	1827	8	7200	-145	10	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGAATCTGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	54613356	54622190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54613528_54615666_54615772_54616416_54616645_54617785_54618017_54621553_54621655_54621744
ENSMUSG00000032288.10_0	chr9	+	903	1	FSM	ENSMUSG00000032288.10	ENSMUST00000034827.10	924	1	14	7	14	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	622	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCACATTTTTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	56844772	56845675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56844800_56845700
ENSMUSG00000032290.8_0	chr9	+	4077	13	FSM	ENSMUSG00000032290.8	ENSMUST00000034832.8	4101	13	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGATTAAACCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56902219	56970080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56902941_56927187_56927332_56929491_56929582_56930242_56930368_56934659_56934766_56940389_56940501_56943766_56944096_56951658_56951753_56955474_56955542_56963997_56964077_56964994_56965146_56967137_56967346_56968228
ENSMUSG00000032293.9_0	chr9	+	5757	22	FSM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	4	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCACATTTGACTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	54771076	54819805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54771181_54772590_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUSG00000032293.9_3	chr9	+	5656	21	ISM	ENSMUSG00000032293.9	ENSMUST00000034843.9	5770	22	1515	9	1515	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCACATTTGACTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	54772587	54819805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54772681_54788636_54788803_54789602_54789741_54791180_54791400_54793158_54793229_54793773_54793958_54794551_54794692_54798286_54798459_54799758_54799857_54802662_54802780_54803723_54803884_54804770_54804907_54806671_54806757_54807233_54807391_54807731_54807857_54811174_54811280_54811378_54811522_54813852_54814001_54814084_54814208_54816025_54816212_54816914
ENSMUSG00000032294.18_0	chr9	+	2416	11	FSM	ENSMUSG00000032294.18	ENSMUST00000034834.16	2432	11	10	6	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTTGTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59563660	59586652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582850_59583018_59585326_59585509_59586010
ENSMUSG00000032294.18_35	chr9	+	2036	11	FSM	ENSMUSG00000032294.18	ENSMUST00000163694.4	2041	11	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTAGATGACGACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	59563858	59586470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59563933_59572482_59572650_59573145_59573238_59575831_59575964_59576195_59576383_59577749_59578021_59578857_59579009_59579203_59579357_59582311_59582479_59585326_59585509_59586010
ENSMUSG00000032295.16_0	chr9	+	3807	26	FSM	ENSMUSG00000032295.16	ENSMUST00000160147.8	3820	26	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGGTGGAGCCATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57037976	57049996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUSG00000032295.16_14	chr9	+	3207	26	FSM	ENSMUSG00000032295.16	ENSMUST00000034836.16	3215	26	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAGCAGCACTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	57038053	57049479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57042728_57042919_57043976_57044084_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046137_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUSG00000032295.16_17	chr9	+	2884	24	FSM	ENSMUSG00000032295.16	ENSMUST00000161182.8	2909	24	16	9	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTAGCAGCACTATAATG	NA	NA	NA	NA	NA	NA	NA	NA	57038085	57049479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57038174_57038442_57038566_57038815_57038940_57040805_57040877_57042373_57042552_57044241_57044353_57044565_57044659_57044752_57044870_57045028_57045125_57045203_57045350_57045680_57045805_57046131_57046254_57046352_57046439_57046529_57046686_57046894_57046993_57047153_57047249_57047482_57047588_57047665_57047823_57047918_57048063_57048384_57048495_57048589_57048670_57048847_57048997_57049089_57049200_57049278
ENSMUSG00000032298.14_0	chr9	-	1847	6	FSM	ENSMUSG00000032298.14	ENST00000355059.9	1860	6	13	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATCCCAGAGCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	57054316	57048353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57049357_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884
ENSMUSG00000032298.14_5	chr9	-	1683	10	FSM	ENSMUSG00000032298.14	ENSMUST00000190245.7	1693	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTTGAACTTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	57055411	57050093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884_57054342_57055367
ENSMUSG00000032298.14_8	chr9	-	1640	9	FSM	ENSMUSG00000032298.14	ENSMUST00000034842.5	1170	9	-21	-449	-10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGAACTTCTTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	57054339	57050090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57050611_57050734_57050898_57051041_57051104_57051262_57051291_57051470_57051599_57051921_57052022_57052228_57052293_57052381_57052502_57053884
ENSMUSG00000032299.11_0	chr9	-	851	8	FSM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAATGTGTATGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57065615	57062329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350_57064423_57065555
ENSMUSG00000032299.11_1	chr9	-	788	7	ISM	ENSMUSG00000032299.11	ENSMUST00000065358.9	858	8	1196	7	1196	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAATGTGTATGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	57064419	57062329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_57062565_57062695_57062873_57063185_57063267_57063455_57063576_57063799_57063840_57064058_57064125_57064350
ENSMUSG00000032300.8_0	chr9	-	4140	3	FSM	ENSMUSG00000032300.8	ENSMUST00000034846.7	4152	3	11	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGATCTAGCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	57169884	57160400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57161613_57163668_57166424_57169711
ENSMUSG00000032300.8_1	chr9	-	3429	2	FSM	ENSMUSG00000032300.8	ENST00000567617.1	3440	2	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAACTACCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	57166364	57160933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57161613_57163614
ENSMUSG00000032301.14_0	chr9	+	1149	9	FSM	ENSMUSG00000032301.14	ENSMUST00000034848.14	1165	9	8	8	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTGGTTATGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	54858081	54865306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54858188_54859365_54859393_54859624_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_15	chr9	+	628	5	ISM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	344	7	344	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCCTTAGAGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	54859967	54865090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_18	chr9	+	794	5	ISM	ENSMUSG00000032301.14	ENST00000413382.6	857	6	2330	12	-169	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGGAAAGATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	54861953	54865297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032301.14_22	chr9	+	439	3	FSM	ENSMUSG00000032301.14	ENST00000558094.1	459	3	11	9	11	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTCACTTAGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	54862133	54865106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_8	chr9	+	677	6	FSM	ENSMUSG00000032301.14	ENST00000558281.5	684	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTCCTTAGAGGCACCA	NA	NA	NA	NA	NA	NA	NA	NA	54859623	54865090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54859668_54859962_54860126_54861946_54862025_54862164_54862254_54863540_54863672_54864918
ENSMUSG00000032301.14_9	chr9	+	845	6	FSM	ENSMUSG00000032301.14	ENST00000413382.6	857	6	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGGAAAGATTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	54859623	54865297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54859668_54861946_54862025_54862164_54862254_54863540_54863672_54864094_54864219_54864918
ENSMUSG00000032305.16_0	chr9	+	2996	4	FSM	ENSMUSG00000032305.16	ENSMUST00000093833.6	3001	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAGCTGTACTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57444815	57450465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57447937
ENSMUSG00000032305.16_3	chr9	+	3007	5	FSM	ENSMUSG00000032305.16	ENSMUST00000114200.10	3017	5	9	1	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCTGTACTGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57444854	57450466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937
ENSMUSG00000032305.16_9	chr9	+	806	7	FSM	ENSMUSG00000032305.16	ENST00000357635.10	821	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATGTATGGCCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	57444899	57449856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57445118_57445306_57445395_57446093_57446172_57446528_57446578_57447937_57448099_57448781_57448807_57449669
ENSMUSG00000032306.15_0	chr9	-	1587	8	FSM	ENSMUSG00000032306.15	ENST00000352410.9	1597	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57459549	57451347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57451681_57451996_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032306.15_10	chr9	-	1770	8	FSM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTGAAGAGCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57460046	57451548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429_57459558_57459986
ENSMUSG00000032306.15_11	chr9	-	1700	7	ISM	ENSMUSG00000032306.15	ENSMUST00000034856.15	1780	8	499	10	12	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGTGAAGAGCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57459547	57451548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032306.15_15	chr9	-	1124	6	ISM	ENSMUSG00000032306.15	ENST00000535694.5	1149	7	9	332	9	-332	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTAGTCTCTCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	57458046	57451996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_57452222_57452477_57452687_57453676_57453851_57455810_57455994_57456319_57456462_57457855
ENSMUSG00000032306.15_4	chr9	-	1380	7	FSM	ENSMUSG00000032306.15	ENST00000566377.5	1388	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCCTGTAGTTGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	57459551	57451347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57451681_57451996_57452222_57453676_57453851_57455810_57455994_57456319_57456462_57457855_57458057_57459429
ENSMUSG00000032307.17_1	chr9	+	3429	13	FSM	ENSMUSG00000032307.17	ENSMUST00000059555.15	3456	13	15	12	15	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAAATCAGTTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55056152	55114801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55057111_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUSG00000032307.17_7	chr9	+	2075	13	FSM	ENSMUSG00000032307.17	ENSMUST00000122441.2	2081	13	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAATTATGAAAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	55057369	55114089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55057686_55070251_55070354_55075486_55075592_55083474_55083532_55087756_55087898_55090385_55090471_55092187_55092249_55092953_55093045_55099125_55099185_55102270_55102320_55102707_55102804_55110984_55111052_55113243
ENSMUSG00000032308.10_0	chr9	+	2810	16	FSM	ENSMUSG00000032308.10	ENSMUST00000053230.7	2826	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTATGCATTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	57496743	57503509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57496970_57497606_57497748_57497943_57498065_57498496_57498602_57499276_57499421_57499613_57499697_57500101_57500258_57500444_57500551_57500740_57500782_57501033_57501137_57501264_57501330_57501416_57501496_57501566_57501608_57501889_57501938_57502065_57502133_57502225
ENSMUSG00000032309.16_0	chr9	+	2096	7	FSM	ENSMUSG00000032309.16	ENSMUST00000034859.15	2112	7	10	6	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAACTGGTGTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	55116218	55131711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55116473_55116636_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUSG00000032309.16_6	chr9	+	1998	6	FSM	ENSMUSG00000032309.16	ENSMUST00000146201.8	2009	6	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAACTGGTGTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	55116480	55131711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55116776_55121192_55121281_55122186_55122283_55125598_55125764_55128305_55128472_55130523
ENSMUSG00000032312.8_0	chr9	-	1858	13	FSM	ENSMUSG00000032312.8	ENSMUST00000034863.8	2749	13	604	287	574	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGGCATTTTACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	57552332	57534215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277
ENSMUSG00000032312.8_1	chr9	-	2153	13	FSM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCCAGCCTCGGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	57541344	57533932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277
ENSMUSG00000032312.8_2	chr9	-	2081	12	ISM	ENSMUSG00000032312.8	ENSMUST00000217314.2	2162	13	2626	6	2626	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCCACCCAGCCTCGGCG	NA	NA	NA	NA	NA	NA	NA	NA	57538724	57533935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649
ENSMUSG00000032312.8_3	chr9	-	2376	15	FSM	ENSMUSG00000032312.8	ENSMUST00000215396.2	2390	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAAGTACGAATCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	57560907	57534202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57541277_57541329_57559114_57559276_57560559
ENSMUSG00000032312.8_5	chr9	-	1908	14	FSM	ENSMUSG00000032312.8	ENST00000439220.6	1915	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAGCAAATGGGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	57552906	57534222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57534787_57534999_57535087_57535160_57535357_57535459_57535534_57535935_57536027_57536103_57536204_57536283_57536350_57536542_57536637_57537450_57537671_57537962_57538076_57538177_57538292_57538649_57538727_57552277_57552331_57552847
ENSMUSG00000032314.15_0	chr9	-	1379	12	FSM	ENSMUSG00000032314.15	ENSMUST00000034866.9	1392	12	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATTACTATCAGAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	55419516	55361793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_55362047_55368903_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55407301_55407449_55419314
ENSMUSG00000032314.15_15	chr9	-	819	10	FSM	ENSMUSG00000032314.15	ENST00000433983.6	825	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAGCTAGTCTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55419359	55368906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025_55403108_55419314
ENSMUSG00000032314.15_16	chr9	-	765	9	ISM	ENSMUSG00000032314.15	ENST00000433983.6	825	10	16261	6	16261	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAGCTAGTCTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55403098	55368906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_55368985_55372077_55372144_55389556_55389640_55392553_55392623_55393985_55394088_55394683_55394795_55396113_55396214_55402845_55402929_55403025
ENSMUSG00000032315.7_0	chr9	+	1421	5	FSM	ENSMUSG00000032315.7	ENST00000395049.8	1431	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTCAGCATCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	57607414	57610136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57608211_57608957_57609085_57609171_57609262_57609354_57609479_57609852
ENSMUSG00000032316.9_0	chr9	-	2485	13	FSM	ENSMUSG00000032316.9	ENSMUST00000065330.8	2496	13	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCTGGTACCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	57673134	57657993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57658405_57659019_57659111_57659397_57659478_57659927_57660011_57660553_57660684_57660783_57660879_57661784_57661952_57662534_57662652_57665566_57665634_57665909_57666007_57668106_57668324_57668998_57669151_57672356
ENSMUSG00000032318.13_0	chr9	+	1841	6	FSM	ENSMUSG00000032318.13	ENSMUST00000034869.11	1854	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCATGCCGCGCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55448438	55453458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55448623_55449383_55449574_55449680_55449944_55451359_55451644_55452224_55452393_55452706
ENSMUSG00000032320.8_0	chr9	+	2006	7	FSM	ENSMUSG00000032320.8	ENSMUST00000114276.3	2024	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGAACGTGCACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	55949151	55966354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55949489_55949858_55949965_55952415_55952613_55960190_55960305_55963442_55963540_55964710_55964854_55965342
ENSMUSG00000032322.15_0	chr9	+	1842	15	FSM	ENSMUSG00000032322.15	ENSMUST00000059206.8	1863	15	12	9	-7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGGCACATTCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	55997257	56036163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035010_56035145_56035872
ENSMUSG00000032322.15_1	chr9	+	1656	15	FSM	ENSMUSG00000032322.15	ENST00000379595.7	1675	15	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAGGCTAGCAGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55997274	56036003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_55997729_56021513_56021615_56022346_56022422_56027584_56027620_56027830_56027938_56030042_56030106_56030545_56030645_56031031_56031078_56031877_56031958_56032407_56032507_56033210_56033308_56033865_56033957_56034768_56034822_56035019_56035145_56035872
ENSMUSG00000032324.12_0	chr9	-	1699	7	FSM	ENSMUSG00000032324.12	ENSMUST00000034876.10	1716	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTACCATGTACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	56068331	56043174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56054369_56054445_56054670_56054863_56068083
ENSMUSG00000032324.12_3	chr9	-	1261	5	FSM	ENSMUSG00000032324.12	ENST00000559494.1	1280	5	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGATCTCAATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	56068212	56043226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_56044020_56052772_56052857_56053058_56053212_56053797_56053900_56068083
ENSMUSG00000032327.15_10	chr9	+	666	3	ISM	ENSMUSG00000032327.15	ENST00000432245.6	766	4	4196	5	4196	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGCGCCTGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	58046592	58048535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_58046725_58047696_58047837_58048141
ENSMUSG00000032327.15_3	chr9	+	755	4	FSM	ENSMUSG00000032327.15	ENST00000432245.6	766	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGTGCGCCTGCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	58042402	58048535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58042492_58046592_58046725_58047696_58047837_58048141
ENSMUSG00000032328.13_0	chr9	-	3639	7	FSM	ENSMUSG00000032328.13	ENSMUST00000034878.12	3658	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79700702	79676233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79687822_79687931_79700255
ENSMUSG00000032328.13_3	chr9	-	3604	6	FSM	ENSMUSG00000032328.13	ENSMUST00000120690.2	3627	6	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAATTAATCGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	79700775	79676233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_79678762_79681374_79681585_79682383_79682534_79683434_79683523_79684505_79684614_79700255
ENSMUSG00000032329.5_0	chr9	+	3770	10	FSM	ENSMUSG00000032329.5	ENSMUST00000034879.5	3778	10	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATGTGACCAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	56325898	56404218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105_56397249_56401816
ENSMUSG00000032329.5_2	chr9	+	1679	9	FSM	ENSMUSG00000032329.5	ENSMUST00000215269.2	1700	9	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTAATCTGTCTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	56325941	56397602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897_56396114_56397105
ENSMUSG00000032329.5_3	chr9	+	2462	8	FSM	ENSMUSG00000032329.5	ENSMUST00000217518.2	2468	8	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCAAAAAATAGTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	56326109	56397561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56326216_56374641_56374735_56381814_56381960_56384465_56384679_56388881_56389015_56389891_56389924_56394899_56394976_56395897
ENSMUSG00000032330.8_0	chr9	-	641	4	FSM	ENSMUSG00000032330.8	ENSMUST00000034881.8	659	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCATTTTGTGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	79667149	79662649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_79662888_79663558_79663644_79665771_79665862_79666921
ENSMUSG00000032332.18_0	chr9	-	11496	66	FSM	ENSMUSG00000032332.18	ENSMUST00000071750.13	11511	66	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGACCTGGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	79625794	79506281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_79508462_79509481_79509653_79510648_79510718_79511674_79511864_79512435_79512503_79512611_79512648_79515701_79515774_79517095_79517150_79519677_79519732_79520197_79520252_79521042_79521139_79521630_79521685_79523304_79523392_79524975_79525054_79527222_79527373_79534270_79534381_79535648_79535792_79537763_79537903_79538000_79538040_79538769_79538935_79540623_79540768_79540909_79541034_79542671_79542812_79545728_79545804_79546953_79547101_79547248_79547366_79548730_79548878_79551148_79551269_79552943_79553074_79554860_79555004_79555942_79556073_79557183_79557327_79558663_79558794_79559216_79559357_79560595_79560726_79562680_79562824_79563860_79563888_79563993_79564127_79564581_79564722_79568265_79568396_79569741_79569879_79580185_79580316_79580638_79580782_79581338_79581469_79581962_79582103_79584439_79584587_79585275_79585441_79585540_79585661_79585742_79585893_79587574_79587697_79588670_79588864_79589303_79589571_79591475_79591749_79599441_79599715_79600645_79600919_79604682_79604956_79606530_79607134_79607538_79607830_79609507_79609682_79610579_79610745_79610912_79611177_79612843_79612904_79613509_79613654_79615097_79615215_79622645_79622754_79625700
ENSMUSG00000032332.18_2	chr9	-	11405	65	ISM	ENSMUSG00000032332.18	ENSMUST00000071750.13	11511	66	3044	9	3044	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGACCTGGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	79622756	79506281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_79508462_79509481_79509653_79510648_79510718_79511674_79511864_79512435_79512503_79512611_79512648_79515701_79515774_79517095_79517150_79519677_79519732_79520197_79520252_79521042_79521139_79521630_79521685_79523304_79523392_79524975_79525054_79527222_79527373_79534270_79534381_79535648_79535792_79537763_79537903_79538000_79538040_79538769_79538935_79540623_79540768_79540909_79541034_79542671_79542812_79545728_79545804_79546953_79547101_79547248_79547366_79548730_79548878_79551148_79551269_79552943_79553074_79554860_79555004_79555942_79556073_79557183_79557327_79558663_79558794_79559216_79559357_79560595_79560726_79562680_79562824_79563860_79563888_79563993_79564127_79564581_79564722_79568265_79568396_79569741_79569879_79580185_79580316_79580638_79580782_79581338_79581469_79581962_79582103_79584439_79584587_79585275_79585441_79585540_79585661_79585742_79585893_79587574_79587697_79588670_79588864_79589303_79589571_79591475_79591749_79599441_79599715_79600645_79600919_79604682_79604956_79606530_79607134_79607538_79607830_79609507_79609682_79610579_79610745_79610912_79611177_79612843_79612904_79613509_79613654_79615097_79615215_79622645
ENSMUSG00000032332.18_29	chr9	-	9943	65	NNC	ENSMUSG00000032332.18	novel	11511	66	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATTCACTGTCATGCG	NA	NA	NA	NA	NA	NA	NA	NA	79625999	79509049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_79509653_79510648_79510718_79511674_79511864_79512435_79512503_79512611_79512648_79515701_79515764_79517095_79517150_79519677_79519732_79520197_79520252_79521042_79521139_79521630_79521685_79523304_79523392_79524975_79525054_79527222_79527373_79534270_79534381_79535648_79535792_79537763_79537903_79538000_79538040_79538769_79538935_79540623_79540768_79540909_79541034_79542671_79542812_79545728_79545804_79546953_79547101_79547248_79547366_79548730_79548878_79551148_79551269_79552943_79553074_79554860_79555004_79555942_79556073_79557183_79557327_79558663_79558794_79559216_79559357_79560595_79560726_79562680_79562824_79563860_79563888_79563993_79564127_79564581_79564722_79568265_79568396_79569741_79569879_79580185_79580316_79580638_79580782_79581338_79581469_79581962_79582103_79584439_79584587_79585275_79585441_79585540_79585661_79585742_79585893_79587574_79587697_79588670_79588864_79589303_79589571_79591475_79591749_79599441_79599715_79600645_79600919_79604682_79604956_79606530_79607134_79607538_79607830_79609507_79609682_79610579_79610745_79610912_79611177_79612843_79612904_79613509_79613654_79615097_79615215_79622645_79622754_79625700
ENSMUSG00000032333.7_0	chr9	+	1970	7	FSM	ENSMUSG00000032333.7	ENSMUST00000034883.7	1984	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGAAGTGCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	58160458	58169801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58160683_58162216_58162324_58163922_58164073_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032333.7_2	chr9	+	1143	6	FSM	ENSMUSG00000032333.7	ENST00000564777.5	1151	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTGGGCCATGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	58160533	58169199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58160683_58162216_58162324_58164303_58164508_58167509_58167706_58168080_58168297_58168928
ENSMUSG00000032334.11_0	chr9	-	3289	7	FSM	ENSMUSG00000032334.11	ENSMUST00000061799.10	3297	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGCAAAGCTACTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	58220461	58195020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58196201_58198037_58198154_58199851_58199948_58200855_58201013_58201641_58201780_58204903_58205013_58218968
ENSMUSG00000032336.18_0	chr9	+	2005	8	FSM	ENSMUSG00000032336.18	ENSMUST00000085651.12	2024	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGGTGCTTGGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	58489584	58560152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58489810_58530969_58531139_58535116_58535212_58547951_58548086_58550811_58551086_58557779_58557802_58558540_58558616_58559141
ENSMUSG00000032338.10_0	chr9	+	5958	9	FSM	ENSMUSG00000032338.10	ENST00000261917.4	5983	9	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATTACAGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	58730151	58770440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58731580_58751160_58751585_58760665_58760828_58762807_58763027_58764999_58765147_58765256_58765498_58766311_58766477_58766583_58769556_58770240
ENSMUSG00000032340.9_13	chr9	-	5396	28	FSM	ENSMUSG00000032340.9	ENSMUST00000214547.2	5414	28	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGAATGAAATGTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	58943701	58783848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814330_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838459_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032340.9_16	chr9	-	4331	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	9	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACTCCAAGCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58943468	58784542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032340.9_18	chr9	-	4458	28	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGACTCCAAGCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58943469	58784542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032340.9_2	chr9	-	7034	29	NIC	ENSMUSG00000032340.9	novel	7379	29	NA	NA	8	-12	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCAATCAAACTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58943598	58782128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_58784641_58785310_58785448_58787874_58788139_58791752_58791912_58795683_58795777_58796264_58796504_58801157_58801306_58806447_58806517_58809365_58809399_58810196_58810392_58811726_58811835_58813932_58814072_58814153_58814378_58815686_58815783_58820430_58820626_58821536_58821648_58824241_58824390_58825889_58825940_58828444_58828584_58829049_58829199_58833044_58833200_58838238_58838399_58863241_58863363_58865180_58865336_58885907_58886045_58889358_58889513_58892883_58893160_58897473_58897792_58943248
ENSMUSG00000032342.14_0	chr9	+	2349	12	FSM	ENSMUSG00000032342.14	ENSMUST00000034896.13	2366	12	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAATACTGTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	78355495	78381423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365330_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032342.14_1	chr9	+	2055	12	FSM	ENSMUSG00000032342.14	ENST00000415954.6	2072	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCACGCGGCAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	78355660	78381137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78355793_78356700_78356901_78356999_78357118_78360045_78360336_78364491_78364605_78364697_78364889_78365198_78365487_78368114_78368320_78368801_78368974_78372165_78372285_78377912_78378074_78381071
ENSMUSG00000032344.18_0	chr9	-	4020	5	FSM	ENSMUSG00000032344.18	ENSMUST00000070742.14	4049	5	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTTAATGTAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	78350464	78337814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78340550_78341594_78341698_78342722_78342966_78344584_78344805_78349745
ENSMUSG00000032344.18_2	chr9	-	3200	5	FSM	ENSMUSG00000032344.18	ENSMUST00000034898.14	3231	5	19	12	-14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAATAAAATAATTCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78350500	78338630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78340510_78341594_78341698_78342722_78342966_78344584_78344805_78349745
ENSMUSG00000032348.7_0	chr9	+	960	7	FSM	ENSMUSG00000032348.7	ENSMUST00000034903.7	977	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATTCTCGTTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78099238	78116624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78099347_78105551_78105659_78106771_78106824_78111513_78111647_78113193_78113336_78115082_78115215_78116338
ENSMUSG00000032349.14_0	chr9	+	2765	8	FSM	ENSMUSG00000032349.14	ENSMUST00000034904.14	2782	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCGTGCTGTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	77824656	77891795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_77824809_77864422_77864489_77868147_77868336_77883066_77883145_77884029_77884202_77887106_77887232_77888755_77888891_77889946
ENSMUSG00000032350.10_0	chr9	+	3412	16	FSM	ENSMUSG00000032350.10	ENSMUST00000034905.9	3423	16	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGGTAGTACGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	77661820	77701760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_77662242_77682360_77682474_77683407_77683591_77686803_77686918_77688365_77688425_77688515_77688650_77692615_77692691_77693031_77693149_77693992_77694132_77694558_77694672_77695088_77695182_77695469_77695575_77698996_77699079_77699161_77699266_77699334_77699456_77700321
ENSMUSG00000032353.10_0	chr9	-	1324	3	FSM	ENSMUSG00000032353.10	ENSMUST00000058488.9	1346	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGAGCATTCTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89587108	89581267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_89582033_89584824_89585074_89586798
ENSMUSG00000032355.17_0	chr9	-	2893	11	FSM	ENSMUSG00000032355.17	ENST00000502396.6	2907	11	6	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGAGTGTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	77159117	77045634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_77045839_77072046_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146669_77147067_77150853_77151010_77159028
ENSMUSG00000032355.17_16	chr9	-	2586	9	FSM	ENSMUSG00000032355.17	ENST00000514921.5	2602	9	10	6	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTGAGCATCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	77151000	77072051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_77072176_77088587_77088679_77097605_77097666_77097788_77097873_77097953_77098020_77124258_77124331_77136766_77138312_77146669_77147067_77150853
ENSMUSG00000032355.17_17	chr9	-	564	3	FSM	ENSMUSG00000032355.17	ENST00000509997.5	582	3	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTGAGCATCTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	77147022	77072051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_77072176_77088587_77088679_77146673
ENSMUSG00000032356.13_0	chr9	+	3895	27	FSM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAAGAGGTCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	89791784	89903480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_89791875_89791931_89792327_89806113_89806224_89826778_89826927_89832960_89833057_89835909_89836164_89849903_89849984_89852405_89852600_89853030_89853141_89856817_89856937_89858736_89858898_89862799_89862864_89863653_89863791_89866318_89866402_89873530_89873780_89876723_89877101_89880719_89880843_89882766_89882941_89883857_89883965_89884404_89884518_89886894_89886956_89891325_89891430_89892447_89892533_89894812_89895011_89899088_89899169_89902365_89902484_89903415
ENSMUSG00000032356.13_27	chr9	+	3806	26	ISM	ENSMUSG00000032356.13	ENST00000558480.7	3907	27	150	8	-30	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTAAGAGGTCTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	89791930	89903480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_89792327_89806113_89806224_89826778_89826927_89832960_89833057_89835909_89836164_89849903_89849984_89852405_89852600_89853030_89853141_89856817_89856937_89858736_89858898_89862799_89862864_89863653_89863791_89866318_89866402_89873530_89873780_89876723_89877101_89880719_89880843_89882766_89882941_89883857_89883965_89884404_89884518_89886894_89886956_89891325_89891430_89892447_89892533_89894812_89895011_89899088_89899169_89902365_89902484_89903415
ENSMUSG00000032359.15_0	chr9	+	1597	12	FSM	ENSMUSG00000032359.15	ENSMUST00000034915.15	1617	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACCTCCCTGGGCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	89936330	89958133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_89936688_89942531_89942564_89943571_89943678_89944769_89944841_89946205_89946311_89946559_89946647_89947444_89947501_89949079_89949162_89950457_89950527_89953871_89953979_89956920_89957047_89957734
ENSMUSG00000032363.16_18	chr9	+	4415	19	FSM	ENSMUSG00000032363.16	ENST00000613213.4	4431	19	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCCTTTCAGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90055685	90082140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_90055841_90059835_90059920_90060205_90060331_90067654_90067934_90068512_90068606_90068974_90069121_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076327_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032363.16_3	chr9	+	5098	23	FSM	ENSMUSG00000032363.16	ENST00000388820.5	5114	23	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCCTTTCAGAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	90053546	90082140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_90053883_90055674_90055841_90056524_90056704_90059835_90059920_90060205_90060331_90061375_90061526_90062677_90062825_90067788_90067934_90068512_90068606_90068974_90069119_90070321_90070492_90070711_90070846_90071671_90071793_90072900_90073146_90073417_90073554_90073888_90074016_90074433_90074648_90074951_90076323_90077210_90077364_90077729_90077904_90077983_90078131_90079052_90079216_90081766
ENSMUSG00000032366.16_0	chr9	-	1885	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113707.9	1898	9	10	3	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66956678	66929874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_5	chr9	-	1596	8	FSM	ENSMUSG00000032366.16	ENSMUST00000113695.8	1607	8	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGGTGGTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	66951074	66929874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032366.16_54	chr9	-	1721	9	FSM	ENSMUSG00000032366.16	ENSMUST00000113697.8	1742	9	9	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAAATAAAACGCACAT	NA	NA	NA	NA	NA	NA	NA	NA	66956548	66929908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66930724_66938310_66938381_66938733_66938797_66939747_66939824_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_63	chr9	-	1198	10	FSM	ENSMUSG00000032366.16	ENSMUST00000113685.10	1208	10	9	1	-3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGGGTACTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	66956486	66935174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66935450_66936945_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66955067_66955194_66956300
ENSMUSG00000032366.16_86	chr9	-	921	8	FSM	ENSMUSG00000032366.16	ENST00000558910.3	942	8	12	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCAAGATCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	66950983	66936759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66937025_66938310_66938381_66938733_66938797_66939232_66939309_66940075_66940147_66941157_66941276_66943276_66943411_66950859
ENSMUSG00000032368.15_0	chr9	-	5586	3	FSM	ENSMUSG00000032368.15	ENSMUST00000034927.13	5606	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAAAATGCCTGCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	91247810	91240119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_91243820_91244511_91244676_91246088
ENSMUSG00000032369.14_0	chr9	+	2290	9	FSM	ENSMUSG00000032369.14	ENSMUST00000093801.10	2302	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTTTGGCTCCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	92131814	92154331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92132414_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUSG00000032369.14_7	chr9	+	1465	9	FSM	ENSMUSG00000032369.14	ENSMUST00000186364.2	1471	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTACACAAAAGAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	92132394	92154022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92132478_92140100_92140128_92141326_92141408_92145085_92145331_92146698_92146742_92148443_92148665_92148764_92148927_92151867_92152030_92153581
ENSMUSG00000032370.9_0	chr9	-	2008	6	FSM	ENSMUSG00000032370.9	ENSMUST00000034929.7	2031	6	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGAAGGCACTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	66882745	66862676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66863483_66874960_66875127_66877863_66878219_66878457_66878649_66881999_66882067_66882322
ENSMUSG00000032372.15_0	chr9	+	1851	8	FSM	ENSMUSG00000032372.15	ENSMUST00000034932.14	1874	8	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAGAAAAGATAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92157667	92179774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92158067_92164164_92164246_92169624_92169858_92171715_92171759_92172691_92172913_92173029_92173192_92177567_92177730_92179224
ENSMUSG00000032372.15_1	chr9	+	1891	8	FSM	ENSMUSG00000032372.15	ENSMUST00000180154.8	1900	8	8	1	8	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTTTAGAAAATAACATTA	NA	NA	NA	NA	NA	NA	NA	NA	92157662	92179804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92158072_92164164_92164246_92169624_92169858_92171715_92171759_92172691_92172913_92173029_92173192_92177567_92177730_92179224
ENSMUSG00000032372.15_8	chr9	+	1219	5	FSM	ENSMUSG00000032372.15	ENSMUST00000113044.3	1239	5	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGCTAATGAGAAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	92171628	92179768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92171759_92172691_92172913_92173029_92173192_92177567_92177730_92179224
ENSMUSG00000032374.15_0	chr9	+	3622	19	FSM	ENSMUSG00000032374.15	ENSMUST00000070522.14	3649	19	8	19	8	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAATTTAAAATAAAC	NA	NA	NA	NA	NA	NA	NA	NA	92424283	92490462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUSG00000032374.15_1	chr9	+	3634	20	FSM	ENSMUSG00000032374.15	ENSMUST00000160359.2	3663	20	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATAATTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92424329	92490457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92424622_92453307_92453400_92455523_92455661_92463254_92463419_92466543_92466657_92468891_92468956_92470653_92470752_92473352_92473455_92475797_92475924_92477314_92477437_92478388_92478494_92480640_92480767_92482793_92482936_92484037_92484101_92485000_92485115_92486831_92486898_92487425_92487531_92488560_92488708_92488816_92488943_92489127
ENSMUSG00000032375.16_0	chr9	-	4892	6	FSM	ENSMUSG00000032375.16	ENSMUST00000034934.15	4910	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTCTTTCTTGGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	66702760	66682489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66686663_66691799_66691928_66696927_66697051_66697879_66697951_66701351_66701523_66702534
ENSMUSG00000032376.13_0	chr9	-	5582	15	FSM	ENSMUSG00000032376.13	ENSMUST00000127569.8	5607	15	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATATATGTCCACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66500406	66421925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427890_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124_66474186_66500065
ENSMUSG00000032376.13_15	chr9	-	1783	14	FSM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTCTATACTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	66474184	66425386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427886_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835_66469968_66474124
ENSMUSG00000032376.13_16	chr9	-	1713	13	ISM	ENSMUSG00000032376.13	ENST00000268049.11	1788	14	4229	3	4229	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCTATACTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	66469958	66425387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427886_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66469835
ENSMUSG00000032376.13_17	chr9	-	1944	14	FSM	ENSMUSG00000032376.13	ENST00000540797.5	1952	14	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCTCTATACTCACATG	NA	NA	NA	NA	NA	NA	NA	NA	66500357	66425386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66425861_66427378_66427447_66427554_66427669_66427886_66428010_66434220_66434302_66434396_66434504_66437525_66437673_66447343_66447458_66449794_66449909_66451227_66451311_66453025_66453108_66455153_66455238_66474124_66474186_66500065
ENSMUSG00000032377.9_0	chr9	+	3186	9	FSM	ENSMUSG00000032377.9	ENSMUST00000034941.9	3204	9	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATCAGTGTTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	92339439	92374505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_92339979_92353773_92353802_92354954_92355066_92364694_92364919_92365873_92365917_92366772_92367000_92370646_92370809_92372004_92372164_92372812
ENSMUSG00000032380.10_0	chr9	+	1755	12	FSM	ENSMUSG00000032380.10	ENSMUST00000034944.9	1772	12	11	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAATGCTTGGGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66065515	66179518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_66065623_66072619_66072718_66127815_66128038_66138994_66139134_66153698_66153829_66157618_66157668_66158356_66158384_66161752_66161906_66162612_66162659_66175960_66176051_66176148_66176233_66178908
ENSMUSG00000032381.6_0	chr9	+	1229	5	FSM	ENSMUSG00000032381.6	ENSMUST00000034945.6	1240	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTCACCTTAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66033903	66046237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_66034253_66039808_66039974_66040713_66040764_66043583_66043630_66045618
ENSMUSG00000032382.15_0	chr9	-	2055	15	FSM	ENSMUSG00000032382.15	ENSMUST00000034946.15	2073	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTCACAGGACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	66032159	65995423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65995852_65996399_65996472_65996809_65996891_65997868_65998013_66000440_66000647_66001640_66001735_66001903_66002018_66003839_66003916_66004680_66004760_66005612_66005755_66008622_66008667_66012154_66012219_66012802_66012931_66016798_66016911_66031888
ENSMUSG00000032383.8_1	chr9	+	864	5	FSM	ENSMUSG00000032383.8	ENSMUST00000034947.7	892	5	26	2	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGCTTGGGTGTGGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65967538	65973903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65967683_65968748_65968863_65970270_65970365_65972768_65972954_65973576
ENSMUSG00000032384.17_0	chr9	+	3975	12	FSM	ENSMUSG00000032384.17	ENSMUST00000205379.2	4001	12	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCTTTATCCCAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65816222	65949179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65816451_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65946858
ENSMUSG00000032384.17_1	chr9	+	7196	14	FSM	ENSMUSG00000032384.17	ENSMUST00000034949.10	7208	14	5	7	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTCCTTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	65816272	65952290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65816451_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65927083_65927195_65939520_65939628_65946858
ENSMUSG00000032384.17_3	chr9	+	5153	13	FSM	ENSMUSG00000032384.17	ENSMUST00000117849.3	5173	13	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTTAAAAAAAAAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	65816724	65950341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65816945_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65939520_65939628_65942331_65942356_65946858
ENSMUSG00000032384.17_4	chr9	+	1639	12	FSM	ENSMUSG00000032384.17	ENSMUST00000130798.3	1648	12	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTTGTTTTCCAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	65831516	65938149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65831545_65857297_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65937906
ENSMUSG00000032384.17_5	chr9	+	1609	11	ISM	ENSMUSG00000032384.17	ENSMUST00000130798.3	1648	12	25784	8	-8336	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTGTTTTCCAAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	65857300	65938150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_65857347_65865610_65866004_65880760_65880802_65888184_65888255_65906676_65906829_65909328_65909564_65915021_65915108_65917344_65917430_65917703_65917853_65920028_65920137_65937906
ENSMUSG00000032386.16_0	chr9	-	7042	15	FSM	ENSMUSG00000032386.16	ENSMUST00000179395.8	7055	15	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAAGAGGGAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	65816070	65736218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209_65792530_65803978_65804213_65805658_65805811_65815720
ENSMUSG00000032386.16_12	chr9	-	1980	13	FSM	ENSMUSG00000032386.16	ENSMUST00000117083.2	1999	13	11	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATTTTAAAAATTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	65792327	65740445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUSG00000032386.16_16	chr9	-	1312	10	FSM	ENSMUSG00000032386.16	ENST00000381279.3	1326	10	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAGGAAAAAAGGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	65782314	65740663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773878_65780380_65780460_65782123
ENSMUSG00000032386.16_3	chr9	-	3891	12	FSM	ENSMUSG00000032386.16	ENSMUST00000122410.8	3915	12	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGACTCAGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	65792313	65738417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65740731_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209
ENSMUSG00000032386.16_4	chr9	-	4197	16	FSM	ENSMUSG00000032386.16	ENSMUST00000119245.8	4211	16	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGAAAAGAAGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	65815954	65739050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65740731_65746216_65746320_65758648_65758741_65760107_65760233_65764605_65764794_65765527_65765655_65771485_65771702_65773753_65773884_65780380_65780460_65782112_65782326_65786356_65786491_65788172_65788343_65792209_65792530_65803978_65804213_65805658_65805811_65815720
ENSMUSG00000032387.16_0	chr9	+	1794	9	FSM	ENSMUSG00000032387.16	ENSMUST00000169003.8	1803	9	5	4	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTGATTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	65536934	65567806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65537005_65537987_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558942_65558987_65566416_65566487_65566719
ENSMUSG00000032387.16_2	chr9	+	1969	8	FSM	ENSMUSG00000032387.16	ENSMUST00000055844.10	1987	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGACTCTGCTCTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	65537851	65567801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65538180_65556630_65556709_65557248_65557288_65557843_65557907_65558214_65558366_65558828_65558987_65566416_65566487_65566719
ENSMUSG00000032388.8_0	chr9	+	2665	9	FSM	ENSMUSG00000032388.8	ENSMUST00000034955.8	2680	9	9	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTATATGTAAGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65368237	65395746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65368437_65372545_65372633_65376056_65376219_65380919_65381001_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032388.8_6	chr9	+	1030	6	FSM	ENSMUSG00000032388.8	ENST00000416889.6	1042	6	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAAAAGCTTGGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	65376066	65394488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65376219_65383121_65383268_65387660_65387770_65389142_65389251_65391723_65391865_65394114
ENSMUSG00000032392.12_0	chr9	+	2467	7	FSM	ENSMUSG00000032392.12	ENSMUST00000069000.9	2482	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAAGTTGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65121983	65146497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65122146_65122630_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUSG00000032392.12_1	chr9	+	2487	6	FSM	ENSMUSG00000032392.12	ENSMUST00000213396.2	2518	6	22	9	22	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCAAGTTGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65122448	65146497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65122915_65133334_65133473_65137087_65137295_65140950_65141123_65143922_65144065_65145135
ENSMUSG00000032393.16_0	chr9	+	4796	21	FSM	ENSMUSG00000032393.16	ENSMUST00000034960.14	4808	21	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTTCCCCCATGA	NA	NA	NA	NA	NA	NA	NA	NA	64939706	64989932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64939906_64942156_64942294_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUSG00000032393.16_9	chr9	+	4658	20	FSM	ENSMUSG00000032393.16	ENST00000300141.11	4671	20	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGCATTGCTGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	64939749	64989974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64939906_64944250_64944524_64949545_64949659_64950967_64951142_64952901_64953071_64958671_64958783_64960326_64960456_64961050_64961113_64961700_64961802_64962109_64962288_64963073_64963234_64967484_64967565_64970708_64970862_64971100_64971237_64973632_64973779_64981720_64981868_64983017_64983171_64985244_64985388_64985955_64986068_64988012
ENSMUSG00000032396.18_0	chr9	-	3570	17	FSM	ENSMUSG00000032396.18	ENSMUST00000168844.9	3575	17	0	5	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACACTTGGCTCAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	64248539	64214042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64248274
ENSMUSG00000032396.18_12	chr9	-	3198	17	FSM	ENSMUSG00000032396.18	ENSMUST00000113890.2	3224	17	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTACTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	64247713	64214292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64247570
ENSMUSG00000032396.18_14	chr9	-	3652	17	FSM	ENSMUSG00000032396.18	ENSMUST00000120760.8	3661	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGTACTTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	64248426	64214292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64214631_64214711_64214887_64215561_64215708_64217448_64217628_64217723_64217879_64218727_64219262_64221215_64221309_64221834_64222083_64224969_64225132_64226364_64226535_64229683_64229864_64231903_64231983_64232989_64233167_64236714_64236851_64238068_64238198_64246760_64246915_64247829
ENSMUSG00000032397.8_0	chr9	+	1833	8	FSM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTTTAAAAAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	64188884	64212698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64188935_64195395_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_14	chr9	+	1769	7	ISM	ENSMUSG00000032397.8	ENSMUST00000216594.2	1841	8	6517	16	6513	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CATAAAATAAATCTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64195401	64212690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032397.8_7	chr9	+	1207	8	FSM	ENSMUSG00000032397.8	ENSMUST00000034964.7	1211	8	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACTCTCAGGATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	64188888	64212070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64188935_64195389_64195526_64196991_64197065_64197655_64197732_64201291_64201415_64201604_64201669_64208323_64208531_64211588
ENSMUSG00000032398.8_0	chr9	+	1193	3	FSM	ENSMUSG00000032398.8	ENSMUST00000034965.8	1228	3	18	17	18	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTATACAGAAAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	64086573	64090397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64086703_64087780_64087871_64089423
ENSMUSG00000032399.9_0	chr9	+	1537	10	FSM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTTTGTTCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	64080657	64085948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64080716_64082105_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032399.9_38	chr9	+	1473	9	ISM	ENSMUSG00000032399.9	ENSMUST00000034966.9	1538	10	1455	0	1455	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTTTGTTCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	64082111	64085948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_64082278_64082475_64082583_64082865_64083005_64083373_64083499_64084222_64084353_64084602_64084760_64085002_64085087_64085178_64085300_64085504
ENSMUSG00000032400.19_0	chr9	-	2935	19	FSM	ENSMUSG00000032400.19	ENSMUST00000122091.8	2957	19	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATAATTGTTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	64080373	64044434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64045342_64047172_64047299_64051361_64051475_64054106_64054203_64054551_64054689_64056680_64056710_64057437_64057595_64060166_64060247_64060832_64060933_64062445_64062502_64063294_64063389_64065976_64066049_64068102_64068259_64068652_64068724_64069845_64070046_64071628_64071748_64072644_64072741_64075894_64075947_64080099
ENSMUSG00000032401.16_0	chr9	+	2153	14	FSM	ENSMUSG00000032401.16	ENSMUST00000034969.14	2171	14	10	8	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCAACTCTCCTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	64024438	64045392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64024583_64024896_64025131_64026061_64026226_64026709_64026798_64027020_64027131_64029387_64029517_64029604_64029701_64033982_64034038_64034119_64034282_64038831_64039107_64040084_64040212_64040379_64040580_64042133_64042198_64045087
ENSMUSG00000032402.13_0	chr9	-	5078	9	FSM	ENSMUSG00000032402.13	ENSMUST00000034973.10	5090	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGATTCCCTGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	63665270	63554054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63557668_63559762_63559908_63561967_63562106_63562832_63563046_63570946_63570998_63573429_63573505_63574756_63574889_63575010_63575205_63664753
ENSMUSG00000032403.9_0	chr9	-	577	2	FSM	ENSMUSG00000032403.9	ENSMUST00000168665.3	595	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCGTTGTGTTTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	63306511	63301734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63301958_63306157
ENSMUSG00000032405.11_0	chr9	-	5519	13	ISM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	28688	4	28430	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATCTGTGTTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	62859473	62785653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037
ENSMUSG00000032405.11_1	chr9	-	5560	14	FSM	ENSMUSG00000032405.11	ENSMUST00000098651.6	5564	14	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATCTGTGTTCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	62888161	62785653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859483_62888129
ENSMUSG00000032405.11_8	chr9	-	2930	14	FSM	ENSMUSG00000032405.11	ENST00000545237.1	2938	14	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62887895	62789019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_62789544_62792053_62792092_62794589_62794733_62799407_62799589_62800410_62800542_62803112_62803274_62810040_62810115_62820031_62820138_62826632_62826768_62827739_62827831_62830562_62830611_62830852_62830938_62859037_62859572_62887216
ENSMUSG00000032407.15_0	chr9	-	7620	28	FSM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTACAACTTGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95393943	95338956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUSG00000032407.15_1	chr9	-	7542	27	ISM	ENSMUSG00000032407.15	ENSMUST00000079659.12	7630	28	9314	6	9305	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTACAACTTGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	95384633	95338956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592
ENSMUSG00000032407.15_22	chr9	-	3491	27	FSM	ENSMUSG00000032407.15	ENSMUST00000078374.13	3520	27	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAAAACTATAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	95394031	95343041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373317_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95384592_95384638_95393869
ENSMUSG00000032407.15_25	chr9	-	3025	27	ISM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	9299	19	9299	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAACAAACACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95384639	95343476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592
ENSMUSG00000032407.15_26	chr9	-	3091	28	FSM	ENSMUSG00000032407.15	ENSMUST00000217176.2	3111	28	1	19	1	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAACAAACACTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95393937	95343476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_95343597_95344755_95344933_95346415_95346535_95348598_95348710_95354095_95354256_95356473_95356541_95357254_95357351_95358159_95358317_95359452_95359576_95361319_95361408_95363705_95363786_95364144_95364308_95366222_95366387_95366460_95366528_95367613_95367719_95370798_95370843_95371752_95371965_95372142_95372309_95373143_95373227_95373320_95373354_95373434_95373530_95374376_95374445_95375150_95375285_95375755_95375871_95377887_95377987_95382740_95382873_95384592_95384638_95393869
ENSMUSG00000032409.16_3	chr9	+	7767	46	FSM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	1	9	1	9	multi-exon	TRUE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAAATCCATGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	95739773	95833706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_95739837_95743421_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ENSMUSG00000032409.16_46	chr9	+	7700	45	ISM	ENSMUSG00000032409.16	ENST00000661310.1	7777	46	3653	9	3653	9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTGAAATCCATGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	95743425	95833706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_95743514_95744835_95744986_95747020_95747899_95748635_95748815_95751934_95752126_95752672_95752826_95753056_95753250_95753486_95753741_95756130_95756322_95756403_95756505_95756755_95756928_95757646_95757818_95760507_95760703_95763278_95763465_95765168_95765262_95767394_95767526_95770152_95770297_95772815_95772910_95775467_95775594_95779588_95779796_95781089_95781204_95785715_95785832_95787790_95787912_95789348_95789487_95790302_95790514_95792531_95792711_95796989_95797155_95798482_95798575_95802397_95802490_95802719_95802898_95803705_95803886_95804800_95804961_95809221_95809402_95814382_95814526_95817531_95817630_95818347_95818581_95819566_95819702_95821202_95821404_95822922_95823067_95824638_95824790_95827140_95827298_95827396_95827551_95829142_95829295_95832597_95832704_95833503
ENSMUSG00000032410.14_0	chr9	+	10236	42	FSM	ENSMUSG00000032410.14	ENSMUST00000185633.7	10256	42	16	4	16	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACACTGCTGCTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95836835	95939852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_95836997_95846023_95846257_95849764_95849863_95851285_95851396_95851499_95851611_95852781_95852865_95855331_95855420_95855502_95855672_95856448_95856517_95856814_95856953_95859582_95859650_95859849_95859956_95861187_95861278_95863827_95863985_95867236_95867357_95870889_95871060_95873028_95873150_95873241_95873341_95877152_95877257_95880268_95880401_95881466_95881630_95884187_95884302_95885896_95885996_95888049_95888166_95888753_95888901_95893263_95893354_95893576_95893713_95899803_95899861_95900099_95900233_95903858_95903929_95906074_95906274_95908890_95908987_95915637_95915747_95917687_95917750_95920671_95920783_95920931_95921055_95921752_95921898_95927538_95927715_95929835_95929950_95930393_95930497_95933646_95933808_95934565
ENSMUSG00000032411.16_0	chr9	+	7336	13	FSM	ENSMUSG00000032411.16	ENSMUST00000034982.16	7354	13	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTAAAATAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	96078360	96205685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUSG00000032411.16_3	chr9	+	1703	14	FSM	ENSMUSG00000032411.16	ENSMUST00000188750.7	1713	14	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGACAGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	96078392	96200017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96078614_96084183_96084242_96105146_96105252_96114734_96114802_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUSG00000032411.16_4	chr9	+	2636	14	FSM	ENSMUSG00000032411.16	ENSMUST00000185644.7	2646	14	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTAACTCAATATTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	96078405	96201029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96078614_96084183_96084242_96114734_96114802_96129102_96129142_96155891_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179679_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUSG00000032411.16_7	chr9	+	2187	10	ISM	ENSMUSG00000032411.16	ENSMUST00000165768.4	2212	11	14562	1	14562	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGTTCTTTTCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	96155899	96200957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_96155996_96169653_96169776_96172632_96172681_96177017_96177181_96179676_96179824_96182424_96182494_96188852_96189005_96192574_96192742_96199529_96199636_96199840
ENSMUSG00000032412.9_0	chr9	-	1977	7	FSM	ENSMUSG00000032412.9	ENSMUST00000034983.7	1994	7	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTTAAAACTTGGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	96246488	96214717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96215748_96217431_96217516_96220711_96220763_96222254_96222440_96225320_96225429_96227817_96227947_96246098
ENSMUSG00000032412.9_4	chr9	-	741	2	FSM	ENSMUSG00000032412.9	ENST00000462082.1	765	2	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGGAAAATAAAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	96227937	96215126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96215748_96227817
ENSMUSG00000032413.13_0	chr9	-	5796	24	FSM	ENSMUSG00000032413.13	ENSMUST00000034984.8	5813	24	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCCTATCTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	96513663	96421362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96424529_96426331_96426519_96426840_96426945_96427641_96427851_96428299_96428383_96434355_96434463_96435165_96435240_96439452_96439531_96442750_96442835_96448068_96448176_96450416_96450541_96451072_96451148_96451743_96451859_96452718_96452868_96453917_96454075_96458338_96458441_96459525_96459603_96462539_96462613_96464795_96464880_96474002_96474080_96484765_96484861_96488145_96488250_96493434_96493553_96513416
ENSMUSG00000032415.15_0	chr9	-	1465	8	FSM	ENSMUSG00000032415.15	ENST00000369747.8	1479	8	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGTACAACGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	86330899	86189311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317449_86322638_86322808_86330815
ENSMUSG00000032415.15_2	chr9	-	1383	7	ISM	ENSMUSG00000032415.15	ENST00000369747.8	1479	8	8093	11	8093	-11	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGTACAACGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	86322809	86189311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317449_86322638
ENSMUSG00000032415.15_3	chr9	-	1771	10	FSM	ENSMUSG00000032415.15	ENSMUST00000034986.14	1790	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGCATGTGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	86346993	86189367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86189930_86254393_86254533_86304893_86305058_86307314_86307424_86309420_86309491_86317336_86317407_86322638_86322808_86330815_86330907_86333866_86334064_86346793
ENSMUSG00000032417.11_0	chr9	+	1339	3	FSM	ENSMUSG00000032417.11	ENSMUST00000034988.10	1355	3	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACCAGAGCAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	86454073	86456941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_86454271_86454889_86455117_86456026
ENSMUSG00000032418.16_0	chr9	-	2376	15	FSM	ENSMUSG00000032418.16	ENST00000369705.4	2388	15	2	10	2	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATAATACCGTAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	86577808	86463431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86463453_86464158_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_1	chr9	-	3254	14	FSM	ENSMUSG00000032418.16	ENSMUST00000034989.15	3288	14	19	15	19	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAATATGAATAATACCG	NA	NA	NA	NA	NA	NA	NA	NA	86577987	86463438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86577725
ENSMUSG00000032418.16_9	chr9	-	3278	14	FSM	ENSMUSG00000032418.16	ENSMUST00000185374.2	3292	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTATGCAAAAGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	86569323	86463465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86464961_86469015_86469115_86476496_86476671_86478108_86478252_86480771_86480878_86493905_86494020_86495593_86495692_86501777_86501888_86528363_86528468_86532920_86533083_86536695_86536772_86559916_86560067_86561871_86562006_86569010
ENSMUSG00000032419.9_0	chr9	-	4663	8	FSM	ENSMUSG00000032419.9	ENSMUST00000034991.8	4679	8	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAACCCTTTTATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	87613306	87584861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_87587999_87589819_87589915_87595550_87595616_87597575_87597744_87606354_87606527_87609416_87609519_87611513_87611719_87612587
ENSMUSG00000032422.19_11	chr9	-	2856	28	FSM	ENSMUSG00000032422.19	ENST00000681981.1	2880	28	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320853	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_13	chr9	-	2649	25	FSM	ENSMUSG00000032422.19	ENST00000682939.1	2676	25	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	3538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320850	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88304950_88305072_88320720
ENSMUSG00000032422.19_15	chr9	-	2858	28	FSM	ENSMUSG00000032422.19	ENST00000683754.1	2883	28	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320852	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_16	chr9	-	2665	26	FSM	ENSMUSG00000032422.19	ENST00000682491.1	2690	26	11	14	11	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88305061	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88302303_88302383_88302801_88302879_88304950
ENSMUSG00000032422.19_17	chr9	-	2907	29	FSM	ENSMUSG00000032422.19	ENST00000515216.6	2931	29	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320853	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261587_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_18	chr9	-	2748	27	FSM	ENSMUSG00000032422.19	ENST00000682738.1	2772	27	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320853	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_20	chr9	-	2775	28	FSM	ENSMUSG00000032422.19	ENST00000682682.1	2799	28	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320853	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88295533_88295622_88297724_88297769_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032422.19_27	chr9	-	2809	27	FSM	ENSMUSG00000032422.19	ENST00000683643.1	2832	27	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAGACTAACAAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	88320854	88258847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88258993_88261562_88261620_88262222_88262315_88263534_88263631_88263772_88263938_88264130_88264255_88265811_88265932_88266022_88266064_88267772_88267885_88269263_88269365_88273814_88273899_88276419_88276622_88280291_88280425_88282775_88282803_88283972_88284032_88284196_88284322_88285317_88285474_88286356_88286472_88286563_88286645_88286751_88286797_88287292_88287369_88289378_88289536_88292610_88292696_88302303_88302383_88302801_88302879_88304950_88305072_88320720
ENSMUSG00000032423.13_1	chr9	-	9443	12	FSM	ENSMUSG00000032423.13	ENSMUST00000069221.12	9450	12	7	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTAGGTATTTTCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	88364605	88329061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88336349_88338415_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_14	chr9	-	2143	12	FSM	ENSMUSG00000032423.13	ENST00000676542.1	2164	12	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	5484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATCTGCTCTAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	88364280	88335998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88336349_88338453_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_37	chr9	-	2926	11	FSM	ENSMUSG00000032423.13	ENSMUST00000173801.8	2944	11	7	11	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACTAAAACTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	88364601	88337641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88338783_88343722_88343845_88344288_88344439_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032423.13_38	chr9	-	2308	9	FSM	ENSMUSG00000032423.13	ENST00000678816.1	2323	9	8	7	-6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACTAAAACTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	88364255	88337641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88338783_88345007_88345214_88346700_88346837_88358841_88359019_88359126_88359241_88361623_88361732_88361846_88361966_88362658_88362819_88364108
ENSMUSG00000032425.16_0	chr9	+	3453	6	FSM	ENSMUSG00000032425.16	ENSMUST00000162827.8	3472	6	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	88430078	88453101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_88430562_88434768_88434915_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ENSMUSG00000032425.16_2	chr9	+	3146	5	FSM	ENSMUSG00000032425.16	ENSMUST00000161458.3	3163	5	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAATCCACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	88430239	88453101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_88430562_88436428_88436598_88449211_88449339_88449560_88449654_88450666
ENSMUSG00000032431.7_0	chr9	-	1662	7	FSM	ENSMUSG00000032431.7	ENSMUST00000084881.5	1674	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTCCGTCCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	114219732	114204202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114204651_114207107_114207192_114208977_114209124_114210653_114210783_114213763_114213936_114215269_114215420_114219199
ENSMUSG00000032434.10_0	chr9	+	3364	4	FSM	ENSMUSG00000032434.10	ENSMUST00000035007.10	3383	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCAGTGTTTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	114560252	114578405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114560442_114566250_114566428_114569126_114569226_114575506
ENSMUSG00000032435.10_0	chr9	+	2589	13	FSM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGGGTCAAATAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	114517869	114553370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114518096_114518276_114518351_114534121_114534239_114535074_114535306_114538212_114538383_114542577_114542672_114544161_114544298_114544667_114544780_114546930_114546991_114548925_114548971_114549616_114549738_114550772_114550926_114552320
ENSMUSG00000032435.10_11	chr9	+	229	2	FSM	ENSMUSG00000032435.10	ENST00000502347.1	235	2	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTACGAAGGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	114518278	114538369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114518351_114538212
ENSMUSG00000032435.10_13	chr9	+	156	1	ISM	ENSMUSG00000032435.10	ENSMUST00000047404.7	2601	13	20356	15001	19938	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTACGAAGGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	114538213	114538369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_114538200_114538400
ENSMUSG00000032436.18_1	chr9	-	980	5	FSM	ENSMUSG00000032436.18	ENSMUST00000035009.16	993	5	9	4	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGTTTCCTTATTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	114610908	114585907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114586360_114587872_114587955_114590974_114591074_114592286_114592461_114610735
ENSMUSG00000032436.18_2	chr9	-	857	4	FSM	ENSMUSG00000032436.18	ENSMUST00000084867.9	874	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAGCAGGTTTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	114610890	114585913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114586360_114587872_114587955_114592286_114592461_114610735
ENSMUSG00000032437.11_0	chr9	-	4187	16	FSM	ENSMUSG00000032437.11	ENSMUST00000035010.10	4221	16	11	23	11	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGTATAACT	NA	NA	NA	NA	NA	NA	NA	NA	115139478	115071671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_115073114_115075112_115075326_115077572_115077687_115079846_115080021_115080745_115080918_115081566_115081755_115082900_115083113_115083856_115084012_115085200_115085250_115086503_115086651_115087529_115087629_115095161_115095262_115096377_115096444_115105771_115106060_115109478_115109588_115138819
ENSMUSG00000032440.14_0	chr9	-	8080	8	FSM	ENSMUSG00000032440.14	ENSMUST00000061101.12	8092	8	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTATTACTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	116004325	115913364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_115987338_115987414_116004011
ENSMUSG00000032440.14_2	chr9	-	3464	7	FSM	ENSMUSG00000032440.14	ENSMUST00000035014.8	3476	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACGACCTGAGTTCAACC	NA	NA	NA	NA	NA	NA	NA	NA	116004422	115918002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_115919626_115922013_115922142_115934101_115934244_115938571_115939372_115958883_115959075_115960612_115960782_116004011
ENSMUSG00000032449.14_0	chr9	-	5202	7	FSM	ENSMUSG00000032449.14	ENSMUST00000085206.11	5227	7	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGAATTGTGCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	96993192	96957020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96961293_96962245_96962536_96967109_96967177_96975129_96975231_96979155_96979234_96982127_96982293_96992963
ENSMUSG00000032449.14_1	chr9	-	4026	3	FSM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	96966517	96957628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96961293_96962245_96962536_96966445
ENSMUSG00000032449.14_2	chr9	-	3952	2	ISM	ENSMUSG00000032449.14	ENSMUST00000035024.8	4043	3	3990	11	3990	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTGTATCTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	96962533	96957628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_96961293_96962245
ENSMUSG00000032456.14_11	chr9	+	1324	4	FSM	ENSMUSG00000032456.14	ENST00000339837.9	1363	4	8	31	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGATAAATAATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	98281514	98293444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98281693_98285586_98285667_98292129_98292985_98293233
ENSMUSG00000032456.14_12	chr9	+	518	2	FSM	ENSMUSG00000032456.14	ENST00000511444.5	536	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGGAAAGGAAAGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	98281515	98292470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98281693_98292129
ENSMUSG00000032456.14_2	chr9	+	380	3	FSM	ENSMUSG00000032456.14	ENST00000512391.5	393	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCAACCTCTGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	98236074	98292182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98236218_98281508_98281693_98292129
ENSMUSG00000032456.14_4	chr9	+	1227	3	FSM	ENSMUSG00000032456.14	ENST00000413939.6	1246	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATCAAAAATACTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	98236077	98293465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98236218_98292129_98292985_98293233
ENSMUSG00000032458.7_0	chr9	+	3052	22	FSM	ENSMUSG00000032458.7	ENST00000507777.6	3055	22	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGAGCATCTCACTCGG	NA	NA	NA	NA	NA	NA	NA	NA	98445752	98470486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98445797_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032458.7_11	chr9	+	2911	22	FSM	ENSMUSG00000032458.7	ENST00000503326.6	2924	22	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTAACTCTGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98445762	98472288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98472110
ENSMUSG00000032458.7_30	chr9	+	3033	22	FSM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGTGAAAGACTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	98445789	98470424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98445877_98450045_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032458.7_56	chr9	+	2997	21	ISM	ENSMUSG00000032458.7	ENSMUST00000035033.7	3050	22	4264	-42	4264	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTGAGCAAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	98450047	98470477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_98450184_98452358_98452446_98452635_98452763_98453546_98453696_98455487_98455635_98456118_98456219_98459010_98459154_98459380_98459581_98461033_98461145_98462134_98462224_98462310_98462418_98463187_98463332_98464324_98464456_98464742_98464951_98467035_98467147_98467984_98468200_98469092_98469186_98469277_98469459_98469604_98469674_98469813_98469883_98470097
ENSMUSG00000032459.10_0	chr9	-	1176	8	FSM	ENSMUSG00000032459.10	ENSMUST00000035034.10	1197	8	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAGTTTTCTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	98483699	98470789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_98470980_98472087_98472197_98474607_98474754_98476125_98476210_98476722_98476867_98478872_98479038_98480187_98480352_98483525
ENSMUSG00000032462.15_0	chr9	-	6469	24	FSM	ENSMUSG00000032462.15	ENSMUST00000035037.14	6478	24	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAAATTTGTTGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	99022132	98918707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934437_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072_98946262_98947612_98947664_98952293_98952425_98953400_98953498_98955631_98955884_98970657_98970736_98972202_98972374_98975095_98975276_98976492_98976717_98983227_98983454_98987583_98987771_99004336_99004430_99022043
ENSMUSG00000032462.15_5	chr9	-	2931	12	FSM	ENSMUSG00000032462.15	ENST00000544716.5	2942	12	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCATCTGTTTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	98946252	98920473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_98921904_98922973_98923107_98924576_98924723_98926797_98926922_98928599_98928768_98934357_98934453_98936023_98936134_98937394_98937574_98942237_98942338_98943783_98943928_98944889_98945012_98946072
ENSMUSG00000032463.11_0	chr9	+	1008	5	FSM	ENSMUSG00000032463.11	ENSMUST00000035038.8	1019	5	8	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGGTGGGTTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	98868433	98884071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98868566_98874153_98874287_98874565_98874795_98881019_98881070_98883607
ENSMUSG00000032468.12_0	chr9	-	4630	22	FSM	ENSMUSG00000032468.12	ENSMUST00000035043.12	4647	22	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAGTCTGTTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	99450941	99360430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_17	chr9	-	2812	12	FSM	ENSMUSG00000032468.12	ENSMUST00000185524.7	2820	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTATAGTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	99450702	99400864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99415150_99415244_99417847_99417946_99418215_99418359_99419740_99419813_99433595_99433673_99450654
ENSMUSG00000032468.12_4	chr9	-	1902	20	FSM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCACACCTTTGTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99450723	99362770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99417847_99417946_99418215_99418359_99419740_99419813_99450654
ENSMUSG00000032468.12_6	chr9	-	1832	19	ISM	ENSMUSG00000032468.12	ENST00000485396.5	1911	20	30914	7	30891	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCACACCTTTGTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	99419811	99362770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_99362831_99365152_99365247_99366018_99366092_99369916_99370013_99378203_99378300_99379295_99379446_99381345_99381439_99384564_99384652_99387317_99387400_99387702_99387786_99402539_99402636_99405191_99405393_99407405_99407467_99408943_99409035_99409131_99409208_99411383_99411465_99417847_99417946_99418215_99418359_99419740
ENSMUSG00000032469.13_1	chr9	+	2238	8	FSM	ENSMUSG00000032469.13	ENSMUST00000066650.12	2261	8	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTATAAATGCTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	99457864	99466544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99458179_99458628_99458754_99460493_99460575_99461409_99461496_99462191_99462417_99464074_99464156_99464369_99464516_99465364
ENSMUSG00000032470.18_0	chr9	-	4672	6	FSM	ENSMUSG00000032470.18	ENSMUST00000035045.15	4701	6	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAACAATCAGAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	99319421	99267488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99270558_99271785_99271866_99274998_99275099_99276521_99276676_99293445_99293656_99318362
ENSMUSG00000032470.18_5	chr9	-	609	4	FSM	ENSMUSG00000032470.18	ENST00000423968.7	634	4	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATACAATGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99318809	99275011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99275099_99276521_99276676_99293445_99293656_99318651
ENSMUSG00000032470.18_7	chr9	-	581	4	FSM	ENSMUSG00000032470.18	ENST00000289104.8	606	4	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATACAATGTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99319066	99275011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_99275099_99276521_99276676_99293445_99293656_99318936
ENSMUSG00000032475.16_0	chr9	-	4457	4	FSM	ENSMUSG00000032475.16	ENSMUST00000116522.8	4476	4	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCATAATTTATAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	100428173	100374350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100377725_100379310_100380024_100390481_100390726_100428047
ENSMUSG00000032475.16_1	chr9	-	1477	3	FSM	ENSMUSG00000032475.16	ENSMUST00000112874.4	1513	3	22	14	22	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAGAAATTATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	100388887	100377069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100377725_100379310_100380024_100388778
ENSMUSG00000032477.15_0	chr9	+	3613	15	FSM	ENSMUSG00000032477.15	ENSMUST00000094324.8	3632	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTGTTCTCTGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	109704658	109722956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713579_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_11	chr9	+	3495	15	FSM	ENSMUSG00000032477.15	ENST00000302506.8	3510	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCTAATATACTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	109704776	109722974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109710540_109710646_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032477.15_18	chr9	+	3392	14	FSM	ENSMUSG00000032477.15	ENST00000351231.7	3405	14	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCCTAATATACTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	109704774	109722974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109705228_109706228_109706303_109707335_109707379_109708298_109708336_109708901_109709004_109712556_109712683_109713186_109713262_109713410_109713561_109716315_109716415_109717941_109718005_109718099_109718199_109718778_109718910_109720812_109720925_109721146
ENSMUSG00000032478.15_0	chr9	+	1070	7	FSM	ENSMUSG00000032478.15	ENSMUST00000035053.12	1074	7	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCCTGTGCAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	109661825	109672038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109661876_109662263_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_2	chr9	+	1015	6	FSM	ENSMUSG00000032478.15	ENSMUST00000200468.2	865	6	159	-309	-8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCCTGTGCAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	109662268	109672038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109662364_109664385_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_3	chr9	+	750	6	FSM	ENSMUSG00000032478.15	ENST00000452211.5	766	6	11	5	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCCACAAACAACCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	109662287	109671667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109662494_109664390_109664483_109668675_109668779_109670543_109670584_109670994_109671156_109671519
ENSMUSG00000032478.15_4	chr9	+	492	4	FSM	ENSMUSG00000032478.15	ENST00000435684.5	506	4	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGGAGGCCACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	109664395	109671660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109664483_109668675_109668779_109670994_109671156_109671519
ENSMUSG00000032478.15_5	chr9	+	340	3	FSM	ENSMUSG00000032478.15	ENST00000415644.5	349	3	4	5	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCCACAAACAACCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	109664393	109671667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109664483_109668675_109668779_109671519
ENSMUSG00000032478.15_6	chr9	+	407	3	ISM	ENSMUSG00000032478.15	ENST00000435684.5	506	4	4284	8	4284	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGGAGGCCACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	109668673	109671660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_109668779_109670994_109671156_109671519
ENSMUSG00000032479.16_0	chr9	+	6076	19	FSM	ENSMUSG00000032479.16	ENSMUST00000035055.15	6091	19	9	6	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTATGTTGCTTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	109760536	109913017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUSG00000032479.16_12	chr9	+	4912	11	FSM	ENSMUSG00000032479.16	ENSMUST00000164930.8	4925	11	6	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACCATGTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	109881121	109913007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109882591_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUSG00000032479.16_14	chr9	+	4021	10	FSM	ENSMUSG00000032479.16	ENSMUST00000199498.5	4055	10	22	12	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAACCTAAGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	109881141	109912229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109882591_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUSG00000032479.16_18	chr9	+	3310	11	FSM	ENSMUSG00000032479.16	ENSMUST00000163979.7	3320	11	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAACCTAAGTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	109891659	109912229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910802
ENSMUSG00000032479.16_4	chr9	+	5563	19	FSM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	2	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACCATGTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	109760933	109913007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109761009_109807917_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUSG00000032479.16_8	chr9	+	5489	18	ISM	ENSMUSG00000032479.16	ENSMUST00000165876.8	5573	19	46985	8	46985	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCACCATGTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	109807916	109913007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_109808160_109828839_109828909_109855168_109855292_109856746_109856861_109861166_109861302_109863440_109864575_109865809_109865924_109892084_109892192_109893295_109893518_109896552_109896737_109897591_109897652_109897760_109898054_109900093_109900208_109901680_109901774_109907070_109907153_109908848_109908962_109910488_109910679_109910908
ENSMUSG00000032480.18_0	chr9	-	3967	23	FSM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109946490	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558_109944651_109946425
ENSMUSG00000032480.18_1	chr9	-	3789	19	FSM	ENSMUSG00000032480.18	ENSMUST00000062368.13	3806	19	16	1	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109930139	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109929883
ENSMUSG00000032480.18_12	chr9	-	3885	23	FSM	ENSMUSG00000032480.18	ENSMUST00000196171.5	3885	23	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109946505	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109937008_109937038_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUSG00000032480.18_19	chr9	-	3829	22	FSM	ENSMUSG00000032480.18	ENSMUST00000111991.9	3829	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCTGTCCTCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	109946479	109913389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944558_109944651_109946425
ENSMUSG00000032480.18_2	chr9	-	3891	22	ISM	ENSMUSG00000032480.18	ENSMUST00000198425.5	3968	23	1851	1	-494	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109944639	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103_109944230_109944558
ENSMUSG00000032480.18_21	chr9	-	4600	23	FSM	ENSMUSG00000032480.18	ENSMUST00000200066.5	4623	23	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGCTGCTGTCCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	109946380	109913390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109945745
ENSMUSG00000032480.18_5	chr9	-	4358	22	FSM	ENSMUSG00000032480.18	ENSMUST00000199529.5	4373	22	14	1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109946487	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944651_109946425
ENSMUSG00000032480.18_7	chr9	-	4425	23	FSM	ENSMUSG00000032480.18	ENSMUST00000197928.5	4441	23	15	1	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109946883	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942159_109944103_109944230_109944558_109944651_109946425
ENSMUSG00000032480.18_8	chr9	-	3722	21	FSM	ENSMUSG00000032480.18	ENSMUST00000165596.8	3726	21	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109944141	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038_109942094_109944103
ENSMUSG00000032480.18_9	chr9	-	3677	20	ISM	ENSMUSG00000032480.18	ENSMUST00000165596.8	3726	21	2059	0	2059	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTGCTGTCCTCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	109942086	109913388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_109913715_109913796_109913937_109914017_109914122_109914212_109914371_109914479_109914640_109914752_109914947_109915017_109915100_109915187_109915395_109915598_109915775_109915999_109916105_109916187_109916264_109916497_109917335_109917620_109917774_109920486_109920637_109921383_109921505_109921925_109922228_109926156_109926268_109927796_109927928_109938093_109938190_109942038
ENSMUSG00000032481.18_0	chr9	+	5703	28	FSM	ENSMUSG00000032481.18	ENSMUST00000088716.12	5717	28	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	109961054	110069239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110066886
ENSMUSG00000032481.18_2	chr9	+	3516	27	FSM	ENSMUSG00000032481.18	ENSMUST00000197984.5	3538	27	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACATGCATAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	109961120	110064353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944
ENSMUSG00000032481.18_3	chr9	+	5763	29	FSM	ENSMUSG00000032481.18	ENSMUST00000199896.2	5773	29	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAGTCCCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	109961107	110069239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109961377_109964636_109964757_109968616_109968703_109976112_109976195_109978998_109979092_109982840_109982911_109986343_109986414_109993869_109993946_109996672_109996799_110000013_110000136_110002948_110003074_110004109_110004170_110006535_110006574_110011989_110012112_110012884_110012957_110014890_110015005_110015825_110015980_110016947_110017062_110019970_110020031_110025220_110025480_110026696_110026859_110031570_110031627_110033279_110033395_110035066_110035222_110042576_110042712_110050959_110051225_110063944_110064122_110065783_110065897_110066886
ENSMUSG00000032482.10_0	chr9	+	2043	4	FSM	ENSMUSG00000032482.10	ENST00000610462.1	2053	4	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAAAGCTGTCCACTT	NA	NA	NA	NA	NA	NA	NA	NA	110074504	110091627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110074763_110075362_110076459_110080026_110080216_110091127
ENSMUSG00000032485.15_0	chr9	+	4197	23	FSM	ENSMUSG00000032485.15	ENSMUST00000098350.10	4227	23	19	11	19	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACATTTACCAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	110162442	110214007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110162574_110182013_110182233_110191461_110191592_110201264_110201423_110202043_110202265_110202457_110202564_110203064_110203238_110203577_110203705_110205630_110205744_110206706_110206802_110207411_110207511_110207636_110207856_110208523_110208901_110209268_110209458_110209561_110209764_110209840_110209957_110210039_110210554_110210630_110210717_110212616_110212700_110212799_110212967_110213133_110213215_110213334_110213542_110213623
ENSMUSG00000032487.9_0	chr1	+	4436	10	FSM	ENSMUSG00000032487.9	ENSMUST00000035065.9	4453	10	16	1	16	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATGGCATTGATATCT	NA	NA	NA	NA	NA	NA	NA	NA	149975797	149983977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_149976027_149976724_149976842_149976963_149977108_149977741_149977886_149978346_149978529_149979425_149979510_149979619_149979867_149980033_149980321_149980692_149980841_149981123
ENSMUSG00000032489.18_0	chr9	+	2116	18	FSM	ENSMUSG00000032489.18	ENST00000444589.6	2133	18	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGAAGGTAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	110312134	110350422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110312227_110314102_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032489.18_14	chr9	+	2024	17	ISM	ENSMUSG00000032489.18	ENST00000444589.6	2133	18	1975	10	1975	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGAAGGTAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	110314102	110350422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_110314269_110317603_110317711_110318903_110319129_110323469_110323554_110323659_110323753_110324878_110325027_110325984_110326050_110330656_110330735_110335260_110335330_110335728_110335834_110338525_110338582_110339448_110339540_110340388_110340523_110346572_110346788_110348102_110348280_110348567_110348684_110350327
ENSMUSG00000032491.15_0	chr9	-	1210	5	FSM	ENSMUSG00000032491.15	ENSMUST00000035069.14	1223	5	11	2	11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTACTTGGCTCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	110453509	110450204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110450806_110450907_110451051_110451139_110451330_110452154_110452304_110453382
ENSMUSG00000032492.15_1	chr9	-	1854	14	FSM	ENSMUSG00000032492.15	ENST00000430002.6	1871	14	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAAGAAGCCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	110571402	110551277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110551693_110552643_110552696_110552777_110552920_110553466_110553562_110553794_110553862_110554180_110554242_110555510_110555665_110556037_110556234_110556478_110556574_110556745_110556865_110556965_110557077_110558662_110558798_110560605_110560709_110571293
ENSMUSG00000032497.20_0	chr9	+	3255	15	FSM	ENSMUSG00000032497.20	ENSMUST00000035078.13	3260	15	5	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCATCCTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	110947183	111054736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_110996267_110996313_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_1	chr9	+	1821	15	FSM	ENSMUSG00000032497.20	ENSMUST00000196981.5	1839	15	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTAATGGATTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	110947189	111053281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111022114_111022187_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032497.20_8	chr9	+	3170	14	FSM	ENSMUSG00000032497.20	ENSMUST00000098340.7	3191	14	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCATTGCATCCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	110947220	111054733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110947458_110948707_110948780_110970257_110970401_110990370_110990458_111017829_111017875_111019235_111019353_111028732_111028904_111034822_111034916_111043208_111043342_111044996_111045047_111048749_111048871_111051225_111051306_111052333_111052439_111053017
ENSMUSG00000032498.10_0	chr9	-	2730	19	FSM	ENSMUSG00000032498.10	ENSMUST00000035079.10	2754	19	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTGATTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111100840	111057327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285_111097377_111100476
ENSMUSG00000032498.10_50	chr9	-	1718	14	FSM	ENSMUSG00000032498.10	ENST00000441265.6	1730	14	6	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGCGAGTGTAGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	111097371	111059973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111060134_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111097285
ENSMUSG00000032498.10_6	chr9	-	2188	18	FSM	ENSMUSG00000032498.10	ENST00000536378.5	2204	18	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAATCATAGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	111100590	111057528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111100476
ENSMUSG00000032498.10_7	chr9	-	2156	18	FSM	ENSMUSG00000032498.10	ENST00000435176.5	2165	18	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAATCATAGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	111097372	111057528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093939_111094034_111097285
ENSMUSG00000032498.10_9	chr9	-	2293	19	FSM	ENSMUSG00000032498.10	ENST00000458205.6	2304	19	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAATCATAGCCACCG	NA	NA	NA	NA	NA	NA	NA	NA	111097370	111057528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111057695_111058907_111059022_111059310_111059404_111059968_111060134_111062390_111062455_111064974_111065084_111068790_111068940_111070292_111070676_111076317_111076472_111078287_111078382_111081931_111082045_111084695_111084785_111085160_111085204_111086467_111086560_111087556_111087630_111090546_111090621_111093934_111094034_111096652_111096787_111097285
ENSMUSG00000032501.10_0	chr15	+	4319	3	FSM	ENSMUSG00000032501.10	ENSMUST00000067543.8	4330	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGATTTCAGGTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	59520209	59528948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59521372_59523327_59523621_59526084
ENSMUSG00000032502.9_0	chr9	-	1065	8	FSM	ENSMUSG00000032502.9	ENST00000457375.6	1082	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGGCGTCCTGAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	111464146	111391542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111391796_111401331_111401470_111401568_111401621_111417872_111417962_111422787_111422853_111431580_111431660_111433126_111433243_111463873
ENSMUSG00000032503.19_0	chr9	-	3049	19	FSM	ENSMUSG00000032503.19	ENST00000417925.5	3071	19	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATATACACTATAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	112016816	111894411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_111895091_111896228_111896378_111948250_111948378_111953807_111954069_111955502_111955608_111956346_111956529_111965521_111965750_111972376_111972607_111976486_111976551_111978402_111978441_111986757_111986867_112005162_112005304_112006001_112006062_112006725_112006805_112008095_112008241_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ENSMUSG00000032503.19_21	chr9	-	2377	6	FSM	ENSMUSG00000032503.19	ENST00000396482.6	2383	6	3	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTCTACAGCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112016993	112010053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657_112016835_112016921
ENSMUSG00000032503.19_22	chr9	-	2303	5	FSM	ENSMUSG00000032503.19	ENSMUST00000178410.2	3419	5	162	954	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTCTACAGCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112016832	112010053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_112011889_112012562_112012653_112013336_112013379_112014676_112014838_112016657
ENSMUSG00000032504.16_0	chr9	-	5935	18	FSM	ENSMUSG00000032504.16	ENSMUST00000035086.13	5951	18	9	7	-6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTACTTCTGTGGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	113537318	113480818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514492_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUSG00000032504.16_11	chr9	-	3195	18	FSM	ENSMUSG00000032504.16	ENSMUST00000111861.4	3223	18	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAACAGTTGTCATTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	113537293	113483548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_113484176_113485084_113485276_113486153_113486278_113488898_113488994_113490013_113490149_113491336_113491586_113500824_113500995_113501770_113501883_113503392_113503571_113507373_113507498_113509020_113509244_113514374_113514507_113516692_113516794_113518642_113518797_113520520_113520649_113526573_113526644_113529036_113529092_113536966
ENSMUSG00000032507.16_0	chr9	-	3456	15	FSM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTTACCCATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113855827	113805780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056_113847119_113855760
ENSMUSG00000032507.16_1	chr9	-	3387	14	ISM	ENSMUSG00000032507.16	ENSMUST00000035090.14	3464	15	8713	6	8713	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTTACCCATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	113847116	113805780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_113808009_113808525_113808739_113813052_113813110_113813608_113813654_113814340_113814402_113815473_113815605_113818187_113818263_113818377_113818505_113819685_113819782_113819876_113819946_113829565_113829661_113832217_113832293_113832509_113832565_113847056
ENSMUSG00000032508.9_0	chr9	-	1937	6	FSM	ENSMUSG00000032508.9	ENSMUST00000035092.7	1960	6	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGTGTACTTGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	119169094	119165009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119165966_119166400_119166577_119166819_119166912_119167071_119167253_119167641_119167777_119168697
ENSMUSG00000032508.9_3	chr9	-	571	3	FSM	ENSMUSG00000032508.9	ENST00000650112.2	585	3	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACCCTGGGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119169022	119166422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119166577_119166819_119166912_119168697
ENSMUSG00000032508.9_4	chr9	-	708	4	FSM	ENSMUSG00000032508.9	ENST00000651800.2	720	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACCCTGGGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119169024	119166422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119166577_119166819_119166912_119167641_119167777_119168697
ENSMUSG00000032508.9_5	chr9	-	860	4	FSM	ENSMUSG00000032508.9	ENST00000417037.8	874	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGACCCTGGGAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	119169130	119166422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119166577_119166819_119166912_119167071_119167253_119168697
ENSMUSG00000032511.18_0	chr9	-	8266	27	FSM	ENSMUSG00000032511.18	ENSMUST00000065196.13	8287	27	13	8	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGACCTGGTCTGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	119391731	119312481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119315885_119318814_119319086_119320526_119320632_119321114_119321253_119322126_119322181_119324572_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119344968_119345131_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372164_119372257_119379671_119379801_119381051_119381142_119389327_119389447_119391417
ENSMUSG00000032511.18_17	chr9	-	6274	26	NIC	ENSMUSG00000032511.18	novel	6290	26	NA	NA	9	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCGAGCAAAGAACATCTT	NA	NA	NA	NA	NA	NA	NA	NA	119391725	119314303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_119315885_119318814_119319086_119320526_119320632_119321114_119321253_119322126_119322181_119324572_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372389_119372482_119379671_119379801_119381051_119381148_119389335_119389447_119391417
ENSMUSG00000032511.18_9	chr9	-	7523	28	FSM	ENSMUSG00000032511.18	ENSMUST00000120420.2	7536	28	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGGAAAACAAACAAACCGA	NA	NA	NA	NA	NA	NA	NA	NA	119408072	119313392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119315885_119318814_119319086_119320526_119320632_119321114_119321253_119322126_119322181_119324572_119324855_119327146_119327270_119330687_119330862_119341206_119341362_119342046_119342168_119344968_119345128_119346413_119346858_119350079_119350437_119351543_119351718_119357977_119358217_119359022_119359156_119362728_119363101_119363620_119363801_119364878_119365077_119365505_119365648_119366687_119366752_119368589_119368821_119372164_119372257_119379671_119379801_119381051_119381142_119389327_119389447_119391417_119391745_119407914
ENSMUSG00000032512.8_0	chr9	+	3829	19	FSM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACAAACACTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119723948	119755641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032512.8_10	chr9	+	3712	18	ISM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	7384	8	7384	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACTTCAGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119731355	119755645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032512.8_6	chr9	+	2995	16	FSM	ENSMUSG00000032512.8	ENSMUST00000217472.2	2997	16	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTTAAAAAAAAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119723962	119751024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622
ENSMUSG00000032512.8_7	chr9	+	3760	19	FSM	ENSMUSG00000032512.8	ENSMUST00000215307.2	3776	19	4	12	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTACAAACACTTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119723975	119755641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119724024_119731351_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745858_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032512.8_9	chr9	+	3758	18	ISM	ENSMUSG00000032512.8	ENSMUST00000036561.8	3845	19	7408	7	7380	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACTTCAGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	119731351	119755645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_119731493_119733343_119733423_119734268_119734352_119734433_119734564_119736193_119736283_119736751_119736854_119738416_119738642_119740089_119740165_119741432_119741536_119742693_119742792_119745791_119745900_119746176_119746274_119747527_119747624_119748714_119748821_119749622_119749711_119751683_119751761_119753143_119753334_119753774
ENSMUSG00000032513.9_0	chr9	-	3889	9	FSM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGTGAAAACAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119766622	119754330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327_119762409_119766523
ENSMUSG00000032513.9_1	chr9	-	3791	8	ISM	ENSMUSG00000032513.9	ENSMUST00000035099.9	3906	9	4222	8	4222	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGTGAAAACAACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119762409	119754330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_119757103_119757292_119757446_119757878_119758030_119758616_119758828_119759038_119759170_119759285_119759373_119761686_119761891_119762327
ENSMUSG00000032515.9_0	chr9	-	2908	4	FSM	ENSMUSG00000032515.9	ENSMUST00000215916.2	2956	4	42	6	42	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGTGTGGTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	119806359	119800236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119802278_119802429_119802745_119803219_119803480_119806067
ENSMUSG00000032518.7_0	chr9	+	1921	7	FSM	ENSMUSG00000032518.7	ENSMUST00000035105.7	1938	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	17682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTACTAAGCCCATACTCA	NA	NA	NA	NA	NA	NA	NA	NA	119956764	119961428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119956897_119957522_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032518.7_23	chr9	+	1581	6	FSM	ENSMUSG00000032518.7	ENSMUST00000217317.2	1599	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGTCTTATGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119956919	119960617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119957689_119958223_119958343_119959183_119959430_119959833_119959963_119960065_119960232_119960465
ENSMUSG00000032519.12_0	chr9	+	1765	7	FSM	ENSMUSG00000032519.12	ENSMUST00000035106.12	1791	7	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACACAGTAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	119939454	119953559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119939639_119945567_119945690_119946518_119946604_119949322_119949503_119949738_119949914_119951159_119951327_119952707
ENSMUSG00000032519.12_1	chr9	+	716	5	FSM	ENSMUSG00000032519.12	ENST00000458247.1	721	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGAGAGAGCTGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	119946527	119952830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119946604_119949322_119949503_119949738_119949914_119951164_119951327_119952707
ENSMUSG00000032519.12_3	chr9	+	639	4	ISM	ENSMUSG00000032519.12	ENST00000458247.1	721	5	2800	1	2800	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGAGAGAGCTGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	119949322	119952829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_119949503_119949738_119949914_119951164_119951327_119952707
ENSMUSG00000032525.16_0	chr9	+	7010	17	FSM	ENSMUSG00000032525.16	ENSMUST00000035112.13	7022	17	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTGGTCTTTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	121548253	121585909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121548362_121548524_121548612_121556381_121556457_121557643_121557752_121558701_121558747_121560543_121560632_121570187_121570218_121570663_121570810_121571630_121571854_121573054_121573211_121574966_121575055_121575510_121575657_121577096_121579953_121580732_121580829_121581472_121581530_121582056_121582159_121583310
ENSMUSG00000032526.12_0	chr9	+	569	3	FSM	ENSMUSG00000032526.12	ENSMUST00000035113.11	577	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGTCCCATGTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	121539402	121541987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121539538_121539704_121539782_121541630
ENSMUSG00000032527.14_0	chr9	-	2164	14	FSM	ENSMUSG00000032527.14	ENSMUST00000149322.8	2188	14	13	11	-3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAACATACTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100916917	100864095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_1	chr9	-	2299	15	FSM	ENSMUSG00000032527.14	ENSMUST00000035116.12	2320	15	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAACATACTTGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100916941	100864095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_2	chr9	-	1554	14	FSM	ENSMUSG00000032527.14	ENST00000483687.5	1571	14	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAGCAGATGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100916902	100864744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_3	chr9	-	1443	13	FSM	ENSMUSG00000032527.14	ENST00000490504.5	1457	13	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAGCAGATGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100916905	100864744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100867940_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032527.14_4	chr9	-	1684	15	FSM	ENSMUSG00000032527.14	ENST00000466072.5	1699	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAGCAGATGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100916904	100864744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100864860_100866425_100866526_100867180_100867280_100867583_100867685_100867831_100868011_100869833_100869958_100876620_100876703_100877612_100877734_100881217_100881327_100894757_100894869_100905188_100905303_100909132_100909190_100912227_100912297_100913908_100914029_100916721
ENSMUSG00000032528.6_1	chr9	+	1296	12	FSM	ENSMUSG00000032528.6	ENST00000433647.5	1308	12	10	2	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCCGCCAGGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121482872	121498636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121482971_121487112_121487221_121489232_121489340_121490030_121490135_121490461_121490595_121493589_121493744_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032528.6_5	chr9	+	935	9	FSM	ENSMUSG00000032528.6	ENST00000438259.6	944	9	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCCGCCAGGCCCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	121487118	121498636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121487221_121489232_121489340_121493589_121493724_121494213_121494275_121494517_121494588_121494874_121494967_121497499_121497630_121497824_121497867_121498439
ENSMUSG00000032531.16_0	chr9	+	4191	10	ISM	ENSMUSG00000032531.16	ENSMUST00000153965.8	4222	11	165	17	165	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAGCTTATAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	102594165	102610595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_102594286_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ENSMUSG00000032531.16_1	chr9	+	4311	10	FSM	ENSMUSG00000032531.16	ENSMUST00000035121.14	4328	10	8	9	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGAGATGTCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102594874	102610608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102595102_102597279_102598076_102600767_102601063_102601885_102602031_102602301_102602395_102605515_102605812_102606466_102606778_102607166_102607376_102607991_102608169_102608846
ENSMUSG00000032532.8_0	chr9	-	685	3	FSM	ENSMUSG00000032532.8	ENSMUST00000035120.6	691	3	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTCCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121324755	121318890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121319268_121323382_121323599_121324663
ENSMUSG00000032532.8_3	chr9	-	595	2	FSM	ENSMUSG00000032532.8	ENSMUST00000215228.2	783	2	306	-118	306	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTGTGTCCAGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	121323600	121318890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121319268_121323382
ENSMUSG00000032534.19_0	chr9	-	4159	13	FSM	ENSMUSG00000032534.19	ENSMUST00000162655.9	4180	13	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGCTGAAATGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	102503722	102461796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_102464212_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102503461
ENSMUSG00000032534.19_4	chr9	-	2679	17	FSM	ENSMUSG00000032534.19	ENSMUST00000093791.10	2696	17	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAGAGTAACTACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	102503313	102463783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_102464212_102465906_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496890_102496960_102498894_102498928_102500754_102500793_102503102
ENSMUSG00000032534.19_7	chr9	-	1969	13	FSM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGAAAACTTTCTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	102496964	102465907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009_102496188_102496894
ENSMUSG00000032534.19_8	chr9	-	1897	12	ISM	ENSMUSG00000032534.19	ENST00000683190.1	1971	13	781	0	781	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAAAACTTTCTCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	102496184	102465906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_102466187_102467526_102467733_102471706_102471794_102473320_102473519_102475367_102475483_102478515_102478654_102479616_102479748_102480040_102480275_102484524_102484639_102490493_102490617_102492473_102492570_102496009
ENSMUSG00000032536.13_0	chr9	+	5350	18	FSM	ENSMUSG00000032536.13	ENSMUST00000210798.3	5363	18	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGAAAGCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121126582	121303974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121299293_121299387_121301302
ENSMUSG00000032536.13_1	chr9	+	3338	17	FSM	ENSMUSG00000032536.13	ENSMUST00000238988.2	3353	17	14	1	-8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGGGGATTGCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	121126591	121302064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121126900_121193066_121193366_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ENSMUSG00000032536.13_4	chr9	+	4817	16	FSM	ENSMUSG00000032536.13	ENSMUST00000045903.8	4827	16	0	10	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGAAAGCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	121196081	121303974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121196258_121220922_121221118_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424_121289644_121298050_121298154_121301302
ENSMUSG00000032536.13_5	chr9	+	1955	12	FSM	ENSMUSG00000032536.13	ENST00000449246.5	1971	12	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTGCCCTCTGTTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	121232515	121283809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121232871_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344
ENSMUSG00000032536.13_6	chr9	+	4032	13	FSM	ENSMUSG00000032536.13	ENSMUST00000211187.2	4043	13	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAACTTTTAGGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	121245044	121291669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121245380_121260544_121260622_121269735_121269853_121271757_121271859_121272691_121272801_121274880_121274960_121275755_121275887_121277173_121277249_121277887_121278020_121280716_121280794_121282273_121282511_121283344_121283662_121289424
ENSMUSG00000032540.17_0	chr9	+	3143	7	FSM	ENSMUSG00000032540.17	ENSMUST00000156520.8	3157	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCCGTGGGTGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122180682	122210585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577
ENSMUSG00000032540.17_2	chr9	+	1163	6	FSM	ENSMUSG00000032540.17	ENST00000458276.7	1185	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGGTTGTCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	122180754	122208864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122208577
ENSMUSG00000032540.17_6	chr9	+	2233	8	FSM	ENSMUSG00000032540.17	ENST00000644371.2	2245	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGCCTTCTGTCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	122180803	122209839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122180905_122194200_122194287_122196953_122197327_122204970_122205126_122206923_122207036_122207886_122208074_122208577_122208964_122209006
ENSMUSG00000032547.13_0	chr9	+	2474	15	FSM	ENSMUSG00000032547.13	ENSMUST00000175883.8	2505	15	3	28	3	-28	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGTAAAAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102712118	102784713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763192_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUSG00000032547.13_3	chr9	+	2836	15	FSM	ENSMUSG00000032547.13	ENSMUST00000035142.8	2852	15	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATACTGCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102712176	102785142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102712439_102739072_102739195_102744753_102744854_102746472_102746608_102748926_102748981_102752937_102753083_102758852_102758954_102763201_102763328_102765668_102765756_102768414_102768485_102774400_102774534_102775657_102775768_102775889_102776050_102783235_102783373_102784048
ENSMUSG00000032548.15_0	chr9	+	7114	14	FSM	ENSMUSG00000032548.15	ENSMUST00000035148.13	7122	14	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTGCCAAGCCATGCA	NA	NA	NA	NA	NA	NA	NA	NA	102885206	102967648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102885915_102923883_102924022_102927342_102927506_102945023_102945252_102946343_102946443_102947426_102947564_102949757_102949834_102950346_102950512_102951574_102951765_102954122_102954289_102956647_102956812_102959527_102959593_102962016_102962141_102962957
ENSMUSG00000032549.8_0	chr9	+	4998	8	FSM	ENSMUSG00000032549.8	ENSMUST00000035155.8	5007	8	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAAGCTCCTTGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	102989007	103062468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102989426_103017580_103017640_103038018_103038073_103038262_103038369_103039740_103039853_103041008_103041103_103044304_103044372_103058380
ENSMUSG00000032551.8_0	chr9	-	3348	3	FSM	ENSMUSG00000032551.8	ENSMUST00000035154.4	3361	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAATATTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122780061	122774162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122777174_122777989_122778135_122779869
ENSMUSG00000032553.15_0	chr9	-	3040	7	FSM	ENSMUSG00000032553.15	ENSMUST00000035157.10	3064	7	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAAGGCTATGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103079323	103065241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103067621_103068267_103068323_103069411_103069549_103074736_103074820_103075987_103076066_103078485_103078581_103079110
ENSMUSG00000032555.11_0	chr9	+	5200	28	FSM	ENSMUSG00000032555.11	ENSMUST00000035164.10	5224	28	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACTTAAACTGTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	103182426	103227616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_103182571_103183295_103183387_103185943_103186079_103187015_103187160_103188692_103188875_103189970_103190168_103192252_103192430_103195185_103195353_103197367_103197532_103197672_103197921_103200466_103200826_103201525_103201699_103202840_103203053_103205605_103205893_103209883_103210055_103210143_103210254_103211254_103211379_103213010_103213158_103213262_103213366_103215378_103215572_103219126_103219348_103220746_103220896_103221123_103221236_103221989_103222154_103222940_103223079_103223882_103223973_103224125_103224288_103226980
ENSMUSG00000032557.14_0	chr9	-	2388	12	FSM	ENSMUSG00000032557.14	ENSMUST00000035166.12	2404	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAATGCACCTGCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	103940325	103923805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103924886_103926432_103926540_103926721_103926801_103927033_103927170_103931261_103931390_103931552_103931658_103932388_103932474_103933001_103933089_103934072_103934183_103937416_103937507_103937592_103937639_103939990
ENSMUSG00000032560.15_0	chr9	-	7991	56	FSM	ENSMUSG00000032560.15	ENSMUST00000035170.13	8012	56	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGCAAACACTTGTCCATAT	NA	NA	NA	NA	NA	NA	NA	NA	104140112	104028484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_104029623_104034012_104034113_104037677_104037822_104039471_104039613_104039853_104040034_104042158_104042333_104042715_104042759_104042892_104043063_104044169_104044283_104044612_104044688_104047913_104048014_104049719_104049812_104051547_104051726_104052845_104052963_104053856_104053971_104056000_104056169_104057267_104057448_104058197_104058318_104059226_104059302_104059703_104059889_104061781_104061918_104063909_104063989_104064746_104064863_104066242_104066445_104067519_104067675_104069304_104069351_104069812_104069968_104073221_104073307_104074357_104074561_104075828_104075934_104077635_104077738_104079086_104079150_104080370_104080531_104080613_104080718_104084951_104085106_104086503_104086587_104089959_104090104_104091015_104091112_104091321_104091398_104092844_104092967_104094910_104094968_104095725_104095882_104097069_104097178_104098602_104098703_104105621_104105792_104105879_104105960_104106073_104106241_104107208_104107301_104107839_104107936_104108029_104108237_104110732_104110934_104114334_104114377_104114775_104114926_104115663_104115740_104123958_104124040_104139897
ENSMUSG00000032562.14_0	chr9	-	1755	9	FSM	ENSMUSG00000032562.14	ENSMUST00000192615.6	1777	9	3	19	3	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAAAACACCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	107512508	107491342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107491915_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUSG00000032562.14_1	chr9	-	2189	9	FSM	ENSMUSG00000032562.14	ENSMUST00000055704.12	2215	9	7	19	7	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAGAAAACACCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	107512559	107491342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107492298_107492810_107493025_107493353_107493508_107493612_107493743_107494133_107494263_107496895_107497057_107497245_107497388_107497618_107497662_107512298
ENSMUSG00000032563.17_0	chr9	+	3953	10	FSM	ENSMUSG00000032563.17	ENSMUST00000035177.15	3972	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATAAATTGCCTCATCAA	NA	NA	NA	NA	NA	NA	NA	NA	104930448	104957079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_104930712_104931619_104931805_104932793_104932886_104934223_104934323_104939097_104939198_104941262_104941324_104948574_104948684_104950973_104951052_104952360_104952439_104954191
ENSMUSG00000032564.17_0	chr9	+	3547	16	FSM	ENSMUSG00000032564.17	ENST00000617767.4	3584	16	26	11	26	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGAATCTTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	104443882	104911733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_104444100_104563623_104563805_104749877_104750058_104777416_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770_104866870_104870326_104870414_104871026_104871087_104884732_104884867_104895673_104895729_104896964_104897017_104899486_104899621_104903901_104904139_104909943
ENSMUSG00000032564.17_2	chr9	+	4285	17	FSM	ENSMUSG00000032564.17	ENST00000512055.5	4303	17	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAATCTTTCTAGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	104443984	104911737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_104444100_104446464_104447301_104563623_104563805_104749877_104750058_104777416_104777489_104778642_104778718_104799691_104799776_104802948_104803039_104866770_104866870_104870326_104870414_104871026_104871087_104884732_104884867_104895673_104895729_104896964_104897017_104899486_104899621_104903901_104904139_104909943
ENSMUSG00000032565.10_0	chr9	-	1594	3	FSM	ENSMUSG00000032565.10	ENSMUST00000035179.9	1631	3	17	20	17	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACACCAATTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105009006	105006550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105007710_105008491_105008762_105008841
ENSMUSG00000032567.17_0	chr9	+	2738	5	FSM	ENSMUSG00000032567.17	ENSMUST00000035181.10	2755	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAAGGTTTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	105272598	105282948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_105272865_105273743_105275058_105278674_105278886_105280594_105280791_105282197
ENSMUSG00000032567.17_1	chr9	+	1218	4	FSM	ENSMUSG00000032567.17	ENSMUST00000167674.2	1227	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAAGGTTTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	105278673	105282948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_105278886_105279916_105279976_105280594_105280791_105282197
ENSMUSG00000032570.18_0	chr9	-	2927	26	FSM	ENSMUSG00000032570.18	ENST00000507488.6	2944	26	14	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTGCTCAGTTTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	105347334	105280563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105280783_105290293_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235
ENSMUSG00000032570.18_100	chr9	-	4857	28	FSM	ENSMUSG00000032570.18	ENSMUST00000038118.15	4876	28	14	5	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGACTTCCCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105372318	105288561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105341824_105341861_105343781_105343872_105344899_105345017_105347235_105347347_105371613_105371797_105372091
ENSMUSG00000032570.18_116	chr9	-	3977	25	FSM	ENSMUSG00000032570.18	ENST00000504948.5	3993	25	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCGATAAAATAAAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	105347337	105289027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235
ENSMUSG00000032570.18_117	chr9	-	4319	27	FSM	ENSMUSG00000032570.18	ENST00000508532.5	4333	27	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGATAAAATAAAAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	105372314	105289026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613_105371682_105372050
ENSMUSG00000032570.18_14	chr9	-	3050	26	FSM	ENSMUSG00000032570.18	ENST00000328560.12	3068	26	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCAAATACTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	105371825	105280569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105280783_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032570.18_16	chr9	-	3087	27	FSM	ENSMUSG00000032570.18	ENST00000359644.7	3104	27	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCAAATACTGCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	105371737	105280569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105280783_105290263_105290389_105291832_105291975_105295248_105295345_105295742_105295891_105297380_105297498_105298772_105298842_105300141_105300309_105301368_105301420_105308693_105308792_105309852_105310024_105312250_105312408_105316539_105316645_105319964_105320055_105320144_105320241_105322416_105322515_105323250_105323376_105326020_105326088_105329002_105329079_105329973_105330043_105330732_105330886_105336858_105336968_105338215_105338278_105343740_105343872_105344899_105345017_105347235_105347347_105371613
ENSMUSG00000032571.15_1	chr9	+	4746	20	FSM	ENSMUSG00000032571.15	ENSMUST00000191268.7	4756	20	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGTAAAAAGGGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	105520232	105564724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_105520621_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ENSMUSG00000032571.15_2	chr9	+	4689	20	FSM	ENSMUSG00000032571.15	ENSMUST00000065778.13	4711	20	19	3	-12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTGGGATTTTTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	105520387	105564853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_105520590_105521394_105522169_105525864_105525999_105527515_105528099_105531150_105531286_105532014_105532237_105535617_105535792_105538535_105538682_105540240_105540445_105544930_105545133_105546184_105546373_105546944_105547156_105549842_105550009_105553941_105554107_105555307_105555520_105559383_105559516_105562329_105562431_105563332_105563422_105563544_105563654_105564313
ENSMUSG00000032575.17_0	chr9	-	2233	4	FSM	ENSMUSG00000032575.17	ENSMUST00000159283.8	2247	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCGGAAAAAGATAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	106769169	106764618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106766425_106767359_106767502_106768269_106768398_106769012
ENSMUSG00000032575.17_1	chr9	-	943	3	FSM	ENSMUSG00000032575.17	ENSMUST00000069036.14	960	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAGCTGGCACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	106768605	106765959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106766425_106767359_106767502_106768269
ENSMUSG00000032578.8_0	chr9	+	2849	3	FSM	ENSMUSG00000032578.8	ENSMUST00000085102.6	2850	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCGCGTGGTTTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	107173224	107179185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107174234_107177122_107177344_107177566
ENSMUSG00000032579.15_0	chr9	-	2186	11	FSM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGGACTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107215549	107204288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199_107214578_107215479
ENSMUSG00000032579.15_1	chr9	-	2112	10	ISM	ENSMUSG00000032579.15	ENSMUST00000035196.14	2192	11	976	6	958	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGGACTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107214573	107204288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_107205272_107205374_107205489_107205633_107205730_107206522_107206632_107207971_107208022_107208289_107208355_107208643_107208779_107213377_107213472_107213770_107213863_107214199
ENSMUSG00000032580.13_0	chr9	-	3188	25	FSM	ENSMUSG00000032580.13	ENSMUST00000182659.8	3205	25	9	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTAAGAGACTCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	107648186	107617577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUSG00000032580.13_15	chr9	-	3047	25	FSM	ENSMUSG00000032580.13	ENSMUST00000035199.13	3064	25	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTCAAAACTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107648181	107617710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626996_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648083
ENSMUSG00000032580.13_9	chr9	-	3076	25	FSM	ENSMUSG00000032580.13	ENST00000347869.8	3095	25	16	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAGAATGGGTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	107648182	107617679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107618292_107619590_107619721_107619799_107619898_107621035_107621111_107621381_107621562_107622133_107622206_107622285_107622436_107623217_107623380_107626906_107626999_107627206_107627292_107627661_107627748_107628917_107628991_107629074_107629153_107629309_107629398_107630175_107630274_107631220_107631382_107631621_107631688_107633051_107633113_107634107_107634192_107636974_107637049_107637520_107637591_107642693_107642850_107644741_107644908_107646759_107646826_107648089
ENSMUSG00000032582.15_0	chr9	-	3976	21	FSM	ENSMUSG00000032582.15	ENSMUST00000035201.13	3999	21	11	12	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAATAAATTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	107750017	107650769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730874_107737547_107737659_107749847
ENSMUSG00000032582.15_1	chr9	-	3702	21	FSM	ENSMUSG00000032582.15	ENSMUST00000183032.8	3716	21	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTGAATAAATTTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	107750014	107650769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107651007_107651790_107651921_107655128_107655227_107656772_107656848_107659808_107660064_107660888_107660985_107664450_107664598_107664977_107665064_107665306_107665389_107665528_107665572_107666806_107666905_107668203_107668365_107668950_107669218_107673675_107673737_107677897_107677973_107710632_107710707_107724466_107724537_107728113_107728204_107729323_107730603_107737547_107737659_107749847
ENSMUSG00000032583.8_0	chr9	+	1577	5	FSM	ENSMUSG00000032583.8	ENST00000455683.6	1595	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAGTGGTTGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107765329	107780311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107765602_107775870_107776011_107778393_107779160_107779814_107779963_107780060
ENSMUSG00000032583.8_1	chr9	+	2027	6	FSM	ENSMUSG00000032583.8	ENSMUST00000035202.4	2042	6	9	6	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGCCCTTTGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	107765389	107780332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107765602_107775870_107776011_107777225_107777715_107778393_107779160_107779814_107779963_107780060
ENSMUSG00000032586.10_0	chr9	+	2696	15	FSM	ENSMUSG00000032586.10	ENSMUST00000049348.9	2706	15	8	2	2	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGGTTTGGCAGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	107828162	107849467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107836014_107836055_107836637_107836766_107838176_107838272_107838740_107838855_107839452_107839541_107840029_107840120_107840527_107840617_107845792_107845949_107847202_107847252_107847667_107847818_107847906_107847958_107848172
ENSMUSG00000032586.10_1	chr9	+	1094	8	FSM	ENSMUSG00000032586.10	ENST00000469027.5	1109	8	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCCTCTCAAGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	107828170	107848134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107828372_107833063_107833122_107833544_107833629_107840029_107840120_107840527_107840617_107845792_107845987_107847667_107847818_107847906
ENSMUSG00000032589.15_0	chr9	-	15911	12	FSM	ENSMUSG00000032589.15	ENSMUST00000035208.14	15938	12	19	8	19	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCAGACAGTCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	108067564	107973228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107977097_107980388_107980482_107980862_107980918_107981142_107981275_107981984_107982088_107982198_107983008_107983308_107985386_107987083_107993726_107994248_107994759_108002888_108003780_108016385_108016795_108067242
ENSMUSG00000032590.15_0	chr9	-	2501	22	FSM	ENSMUSG00000032590.15	ENSMUST00000193254.6	2518	22	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGAGCCTGGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	107971796	107962619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107962877_107962959_107963067_107963148_107963252_107963337_107963529_107963621_107963711_107964221_107964303_107964379_107964464_107964921_107965061_107965459_107965549_107966716_107966769_107967287_107967386_107968441_107968503_107968966_107969089_107969169_107969211_107969286_107969379_107969474_107969613_107969752_107969917_107970005_107970082_107970179_107970274_107970820_107970948_107971425_107971559_107971633
ENSMUSG00000032594.12_0	chr9	+	4544	6	FSM	ENSMUSG00000032594.12	ENSMUST00000035214.11	4559	6	5	10	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTGAACTCTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	107879704	107925971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107880022_107901301_107901650_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032594.12_5	chr9	+	4059	5	FSM	ENSMUSG00000032594.12	ENST00000395238.5	4073	5	8	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTGAACTCTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	107879841	107925971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107880022_107909197_107909409_107918103_107918286_107921923_107922100_107922661
ENSMUSG00000032596.15_0	chr9	+	3178	24	FSM	ENSMUSG00000032596.15	ENSMUST00000035216.11	3195	24	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGAAGGCACAAGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	107852740	107861246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107852913_107852995_107853165_107853253_107853389_107853504_107853612_107853908_107854000_107854102_107854239_107854329_107854428_107854527_107854675_107855050_107855222_107855407_107855516_107855663_107855745_107855824_107855981_107856054_107856221_107856298_107856505_107856592_107856658_107856742_107856891_107856961_107857037_107857227_107857382_107858075_107858159_107858402_107858496_107858588_107858781_107860295_107860389_107860461_107860563_107861015
ENSMUSG00000032598.9_1	chr9	+	3349	13	FSM	ENSMUSG00000032598.9	ENSMUST00000035218.9	3360	13	5	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCAGCTAGTGTCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	108685571	108696037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108685854_108688244_108688355_108688747_108688953_108689077_108689169_108689417_108689909_108691147_108691319_108691463_108691551_108691628_108691768_108691865_108691947_108692126_108692256_108692358_108692452_108692545_108692719_108694740
ENSMUSG00000032599.13_1	chr9	+	695	3	FSM	ENSMUSG00000032599.13	ENST00000450045.5	710	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGCTCGTCGGCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	108662717	108674675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108662810_108673262_108673596_108674405
ENSMUSG00000032599.13_3	chr9	+	605	2	ISM	ENSMUSG00000032599.13	ENST00000450045.5	710	3	10553	5	68	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCGCTCGTCGGCACCGC	NA	NA	NA	NA	NA	NA	NA	NA	108673260	108674675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_108673596_108674405
ENSMUSG00000032599.13_4	chr9	+	719	2	ISM	ENSMUSG00000032599.13	ENSMUST00000194875.6	748	3	12211	11	-55	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGACAAAAGGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	108673274	108674880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_108673596_108674482
ENSMUSG00000032599.13_5	chr9	+	1183	4	FSM	ENSMUSG00000032599.13	ENSMUST00000192028.6	1199	4	7	9	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAATGTGTCTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	108673336	108675184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108673596_108673739_108673772_108673869_108673983_108674405
ENSMUSG00000032601.14_0	chr9	+	4944	11	FSM	ENSMUSG00000032601.14	ENSMUST00000035220.12	4965	11	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCCTGGTGTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	108569362	108627635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059
ENSMUSG00000032601.14_1	chr9	+	1832	12	FSM	ENSMUSG00000032601.14	ENST00000454963.5	1851	12	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAGTGGCAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108569449	108626669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108569912_108591471_108591508_108594061_108594115_108596401_108596486_108605372_108605480_108610308_108610463_108617633_108617736_108617886_108617962_108621428_108621495_108622680_108622823_108624059_108624196_108626254
ENSMUSG00000032602.7_0	chr9	+	1765	9	FSM	ENSMUSG00000032602.7	ENSMUST00000035222.6	1783	9	12	6	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCATCGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	108539308	108561834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108539532_108546964_108547058_108549617_108549746_108554782_108554874_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032602.7_1	chr9	+	1520	7	FSM	ENSMUSG00000032602.7	ENST00000430379.5	1534	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTCCATCGTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	108539334	108561834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108539532_108546964_108547058_108557285_108557404_108559170_108559244_108559545_108559656_108560247_108560373_108561030
ENSMUSG00000032604.17_0	chr9	+	2792	24	FSM	ENSMUSG00000032604.17	ENSMUST00000006838.16	2800	24	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108384912	108393140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388337_108388410_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUSG00000032604.17_8	chr9	+	2371	23	FSM	ENSMUSG00000032604.17	ENSMUST00000134939.9	2374	23	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCTCTGTTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	108385261	108393140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108385399_108385581_108385730_108386075_108386186_108386347_108386424_108386639_108386705_108387293_108387348_108387486_108387548_108388529_108388616_108388730_108388818_108389681_108389782_108389898_108389978_108390058_108390168_108390264_108390396_108390484_108390578_108390867_108391006_108391091_108391180_108391263_108391408_108391488_108391594_108391741_108391835_108391944_108392073_108392165_108392233_108392305_108392432_108392994
ENSMUSG00000032606.8_0	chr9	+	2120	6	FSM	ENSMUSG00000032606.8	ENSMUST00000035227.8	2133	6	7	6	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGACTGTGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108167634	108173691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172193_108172266
ENSMUSG00000032606.8_10	chr9	+	600	5	ISM	ENSMUSG00000032606.8	ENST00000615713.4	640	7	4	1499	4	-1499	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACAGTGTCCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	108167732	108172195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087
ENSMUSG00000032606.8_7	chr9	+	621	6	NNC	ENSMUSG00000032606.8	novel	640	7	NA	NA	13	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATGTGACTGTGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108167741	108173691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_108167862_108170534_108170712_108171129_108171244_108171644_108171717_108172087_108172197_108173662
ENSMUSG00000032607.13_0	chr9	+	1301	9	FSM	ENSMUSG00000032607.13	ENST00000538581.6	1316	9	9	6	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGTTTCTCTAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108174060	108178726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108174225_108174340_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_2	chr9	+	1012	7	FSM	ENSMUSG00000032607.13	ENST00000458307.6	1029	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGTTTCTCTAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108174333	108178726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108174495_108174910_108174992_108176578_108176658_108176943_108177090_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_3	chr9	+	710	4	FSM	ENSMUSG00000032607.13	ENST00000636199.1	723	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGTTTCTCTAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108174329	108178726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108174495_108177732_108177914_108178271_108178428_108178518
ENSMUSG00000032607.13_4	chr9	+	994	7	FSM	ENSMUSG00000032607.13	ENST00000637682.1	1005	7	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTGTTTCTCTAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	108174327	108178726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108174495_108174910_108174992_108175966_108176099_108176578_108176658_108176943_108177090_108177732_108177914_108178518
ENSMUSG00000032609.13_0	chr9	-	2932	11	FSM	ENSMUSG00000032609.13	ENSMUST00000193286.6	2956	11	14	10	14	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTCAAATCTGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	108338766	108324844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108325685_108326024_108326127_108326265_108326491_108326819_108326985_108328074_108328591_108329515_108329939_108331991_108332111_108332592_108332775_108335875_108336036_108336423_108336509_108338651
ENSMUSG00000032612.15_0	chr9	+	3647	22	FSM	ENSMUSG00000032612.15	ENSMUST00000035237.12	3662	22	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTCTCCACGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	108225065	108269743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243028_108243170_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032612.15_6	chr9	+	3428	21	FSM	ENSMUSG00000032612.15	ENSMUST00000194959.6	3436	21	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCATAAAACTGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	108225115	108269715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108225218_108228108_108228237_108233609_108233741_108237293_108237421_108239759_108239906_108240035_108240098_108243959_108244078_108245017_108245192_108248099_108248259_108249760_108249986_108250805_108250890_108251422_108251518_108255634_108255827_108256463_108256553_108258526_108258752_108261283_108261355_108261595_108261715_108262005_108262156_108265475_108265580_108268178_108268268_108268877
ENSMUSG00000032615.15_0	chr11	+	1288	5	FSM	ENSMUSG00000032615.15	ENSMUST00000102695.4	1306	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATAGCCTGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59738909	59767352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765494_59766630
ENSMUSG00000032615.15_4	chr11	+	598	5	FSM	ENSMUSG00000032615.15	ENST00000616989.1	617	5	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTACTATGGCTCTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	59739042	59766775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59739199_59743616_59743718_59751575_59751637_59765378_59765514_59766630
ENSMUSG00000032621.9_1	chr13	-	6312	10	FSM	ENSMUSG00000032621.9	ENSMUST00000210489.2	6330	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCACTCTTGAGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	103901079	103875862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
ENSMUSG00000032621.9_13	chr13	-	1324	3	FSM	ENSMUSG00000032621.9	ENST00000612404.4	1344	3	14	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTTCTCTGTACTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	103911111	103902657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103903543_103905824_103905959_103910806
ENSMUSG00000032621.9_4	chr13	-	3909	12	FSM	ENSMUSG00000032621.9	ENSMUST00000074616.7	3934	12	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGGAAAGAGTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	103911099	103878127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103880225_103881292_103881438_103885266_103885363_103888901_103889211_103889532_103889653_103894693_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389_103900515_103905824_103905959_103910806
ENSMUSG00000032624.17_3	chr17	+	3019	23	FSM	ENSMUSG00000032624.17	ENST00000401738.3	3034	23	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTGCTAGTGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	83658510	83785513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_83658669_83717454_83717638_83729034_83729165_83732686_83732861_83734651_83734785_83735620_83735678_83747459_83747584_83748724_83748875_83752057_83752128_83753374_83753486_83755588_83755685_83758074_83758210_83758367_83758504_83761829_83761982_83763460_83763587_83763670_83763803_83764423_83764492_83768957_83769047_83770926_83771025_83780474_83780563_83781078_83781178_83784632_83784764_83785134
ENSMUSG00000032625.15_0	chr6	-	5655	27	NIC	ENSMUSG00000032625.15	novel	5678	28	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAGAAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	12749392	12317085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_-_12317451_12318112_12318201_12320905_12321117_12321887_12321971_12324595_12324692_12327492_12327667_12330936_12331112_12331543_12331690_12331927_12332046_12337250_12337367_12338579_12338725_12343111_12343266_12348195_12348330_12351983_12352163_12379391_12379656_12381219_12381415_12396554_12396659_12397837_12397971_12405107_12405224_12408801_12409037_12418243_12418439_12468787_12469001_12471040_12471197_12500985_12501168_12503914_12504164_12554893_12555726_12748795
ENSMUSG00000032633.13_0	chr11	-	3420	13	FSM	ENSMUSG00000032633.13	ENSMUST00000102697.10	3437	13	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAACAGAGGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59700829	59682237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695346_59695618_59698625_59698742_59700485
ENSMUSG00000032633.13_5	chr11	-	3413	13	NNC	ENSMUSG00000032633.13	novel	3437	13	NA	NA	19	-4	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAACAGAGGTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	59700823	59682237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_59683638_59684911_59685018_59685098_59685231_59685966_59686091_59686575_59686690_59688880_59689072_59690179_59690272_59691868_59692030_59692954_59693177_59694574_59694722_59695347_59695618_59698625_59698742_59700485
ENSMUSG00000032637.16_0	chr7	-	3775	23	FSM	ENSMUSG00000032637.16	ENST00000340394.12	3798	23	11	12	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAACTTAACCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	126102561	126090891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126091388_126091983_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ENSMUSG00000032637.16_11	chr7	-	3494	23	FSM	ENSMUSG00000032637.16	ENST00000564304.5	3508	23	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGAATGGGAGGGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126102514	126091197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126091388_126091929_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095819_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ENSMUSG00000032637.16_3	chr7	-	4425	22	FSM	ENSMUSG00000032637.16	ENST00000336783.9	4440	22	8	7	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAACTTAACCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	126102615	126090891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126092174_126092335_126092549_126092724_126092847_126092932_126093063_126093310_126093502_126093591_126093665_126093748_126093896_126094371_126094442_126094531_126094828_126094992_126095064_126095460_126095533_126095608_126095801_126096425_126096537_126096664_126096841_126097276_126097478_126098321_126098414_126099300_126099426_126099894_126100046_126100274_126100347_126100427_126100485_126100593_126100631_126102071
ENSMUSG00000032640.11_0	chr7	+	4166	3	FSM	ENSMUSG00000032640.11	ENSMUST00000036372.8	4176	3	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCATTTTGTCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	65759269	65823543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65759976_65774989_65775486_65820579
ENSMUSG00000032641.19_0	chr6	-	1633	4	FSM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGGTTCCTGTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	134874772	134846059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134847407_134864592_134864749_134874124_134874177_134874694
ENSMUSG00000032641.19_1	chr6	-	1547	3	ISM	ENSMUSG00000032641.19	ENSMUST00000165392.8	1643	4	611	3	611	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGTTCCTGTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	134874167	134846058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_134847407_134864592_134864749_134874124
ENSMUSG00000032641.19_2	chr6	-	2064	5	FSM	ENSMUSG00000032641.19	ENSMUST00000116515.9	2075	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATTATGGTTCCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	134874884	134846062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134847407_134854179_134854298_134864592_134864749_134873820_134874177_134874794
ENSMUSG00000032641.19_4	chr6	-	1604	4	FSM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTCACTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	134874821	134846076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134847446_134864592_134864749_134874124_134874177_134874794
ENSMUSG00000032641.19_5	chr6	-	1581	3	ISM	ENSMUSG00000032641.19	ENSMUST00000046255.14	1610	4	641	6	598	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTCACTATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	134874180	134846076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_134847446_134864592_134864749_134874124
ENSMUSG00000032643.13_0	chr4	+	1647	6	FSM	ENSMUSG00000032643.13	ENSMUST00000038684.6	1664	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGAGCACGGGCCCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	124594523	124602398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124594645_124599405_124599583_124599676_124599852_124601046_124601217_124601309_124601524_124601608
ENSMUSG00000032652.14_0	chr6	+	1342	4	FSM	ENSMUSG00000032652.14	ENST00000228865.3	1362	4	9	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAAAAGTTCTCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	134807123	134833651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134832936
ENSMUSG00000032652.14_4	chr6	+	3602	5	FSM	ENSMUSG00000032652.14	ENSMUST00000046303.12	3629	5	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAATAACGTTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	134807133	134835884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134807408_134826065_134826264_134828042_134828188_134829240_134829278_134832936
ENSMUSG00000032657.16_0	chr3	+	3073	12	FSM	ENSMUSG00000032657.16	ENSMUST00000041913.13	3083	12	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGAGTATTCTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	89090519	89096598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89091256_89091458_89091516_89091719_89091831_89091936_89092057_89092195_89092304_89092740_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ENSMUSG00000032657.16_4	chr3	+	2330	9	FSM	ENSMUSG00000032657.16	ENST00000350210.6	2339	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTTTGGAGTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	89090968	89096595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89091256_89092195_89092304_89092743_89092917_89093040_89093141_89094085_89094156_89094365_89094912_89095382_89095452_89095529_89095784_89095872
ENSMUSG00000032661.10_0	chr5	-	4695	16	FSM	ENSMUSG00000032661.10	ENSMUST00000044833.9	4720	16	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGCTTCTTGGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	120915703	120891164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120892441_120892620_120892769_120894091_120894331_120894969_120895146_120896777_120897064_120897985_120898160_120899189_120899335_120899645_120899897_120902308_120902485_120904062_120904343_120907105_120907613_120907915_120908070_120909075_120909312_120910945_120911122_120911931_120912215_120915515
ENSMUSG00000032661.10_1	chr5	-	390	2	FSM	ENSMUSG00000032661.10	ENST00000680966.1	411	2	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCGCGTGGGTTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	120912200	120910942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120911064_120911931
ENSMUSG00000032666.17_0	chr1	-	9545	6	FSM	ENSMUSG00000032666.17	ENSMUST00000044581.14	9559	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTGTCCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	151965869	151760281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_151769184_151791232_151791294_151796797_151796875_151856176_151856272_151882295_151882519_151965682
ENSMUSG00000032667.18_0	chr6	-	2395	9	FSM	ENSMUSG00000032667.18	ENSMUST00000057792.9	2409	9	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACCGTCTTCTCGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	5298443	5264148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_5265480_5266111_5266241_5266964_5267047_5268977_5269179_5272324_5272452_5273000_5273167_5277871_5277928_5289012_5289084_5298211
ENSMUSG00000032673.6_0	chr11	-	2118	3	FSM	ENSMUSG00000032673.6	ENSMUST00000133103.2	2126	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAATGAATTTTTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	29465031	29461764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29463677_29464431_29464523_29464916
ENSMUSG00000032673.6_1	chr11	-	901	2	FSM	ENSMUSG00000032673.6	ENSMUST00000039900.4	918	2	16	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTGTCTTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	29465017	29462876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29463677_29464916
ENSMUSG00000032679.13_0	chr2	+	1673	4	FSM	ENSMUSG00000032679.13	ENSMUST00000040423.12	1691	4	7	11	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGGAAAAAGCAGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	103926152	103945688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103926273_103934515_103934595_103941084_103941190_103944319
ENSMUSG00000032688.10_0	chr18	+	5328	16	FSM	ENSMUSG00000032688.10	ENSMUST00000049248.7	5331	16	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACCTTTTTCATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	65564019	65612135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65564470_65570892_65571060_65577902_65578025_65580623_65580784_65581249_65581429_65581992_65582090_65584617_65584645_65586745_65586776_65591239_65591444_65595806_65595985_65597111_65597187_65597784_65597913_65603459_65603610_65606070_65606229_65608203_65608330_65609058
ENSMUSG00000032691.15_0	chr11	+	3212	10	FSM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGACCACCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59433637	59457095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59433694_59433894_59434220_59437599_59437714_59438815_59440572_59442596_59442768_59446573_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ENSMUSG00000032691.15_16	chr11	+	3150	9	ISM	ENSMUSG00000032691.15	ENST00000391828.8	3214	10	263	2	263	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGGACCACCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	59433900	59457095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_59434220_59437599_59437714_59438815_59440572_59442596_59442768_59446573_59446745_59449208_59449380_59455865_59456037_59456670_59456842_59456989
ENSMUSG00000032702.17_0	chr19	+	4874	11	FSM	ENSMUSG00000032702.17	ENST00000382297.7	4892	11	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCTGTTGCTTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	25386475	25411854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_25389129_25399507_25399706_25400282_25400392_25401501_25401748_25403260_25403349_25405340_25405561_25407584_25407728_25408242_25408444_25410228_25410328_25410884_25411422_25411474
ENSMUSG00000032705.10_0	chr12	+	3294	9	FSM	ENSMUSG00000032705.10	ENSMUST00000038185.10	3310	9	6	10	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCACAAAGCTCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	80509874	80544886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80510055_80522496_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032705.10_2	chr12	+	3925	9	FSM	ENSMUSG00000032705.10	ENST00000312994.9	3942	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAATACGCAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	80522505	80545784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80522654_80522731_80522963_80527228_80527486_80531019_80531147_80536175_80536508_80537554_80537662_80537868_80538005_80539315_80539673_80543554
ENSMUSG00000032712.17_0	chr6	+	6036	5	FSM	ENSMUSG00000032712.17	ENSMUST00000046689.13	6066	5	19	11	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	149210944	149237150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149211403_149211819_149211876_149226902_149231283_149232923_149233005_149236089
ENSMUSG00000032712.17_15	chr6	+	5455	3	FSM	ENSMUSG00000032712.17	ENSMUST00000189837.2	5469	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACTACAGTTTAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	149226963	149237150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149231283_149232929_149233005_149236089
ENSMUSG00000032712.17_4	chr6	+	5255	5	FSM	ENSMUSG00000032712.17	ENSMUST00000189932.7	5269	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGGCAAAAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	149210978	149236421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149211403_149211819_149211858_149226902_149231283_149232923_149233005_149236089
ENSMUSG00000032712.17_5	chr6	+	5335	6	FSM	ENSMUSG00000032712.17	ENSMUST00000100765.11	5356	6	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGGCAAAAAGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	149210985	149236421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149211403_149211819_149211876_149226229_149226299_149226902_149231283_149232923_149233005_149236089
ENSMUSG00000032714.7_0	chr10	-	3272	8	FSM	ENSMUSG00000032714.7	ENSMUST00000040580.7	3288	8	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAGATTCTGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	78427791	78420345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78421746_78421923_78422150_78422792_78422954_78423164_78423292_78424540_78424756_78424934_78425580_78425735_78426078_78427635
ENSMUSG00000032715.10_0	chr2	-	1997	4	FSM	ENSMUSG00000032715.10	ENSMUST00000040312.7	2026	4	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGTGAAACATCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	152185933	152179351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152180608_152181634_152181928_152184956_152185248_152185776
ENSMUSG00000032724.6_0	chr2	+	4516	17	FSM	ENSMUSG00000032724.6	ENSMUST00000076212.4	4558	17	32	10	32	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACATTGGCATTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	103396686	103548758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_103397955_103509089_103509237_103513622_103513837_103531115_103531269_103532600_103532767_103535397_103535488_103535975_103536078_103537921_103538019_103538424_103538561_103539624_103539852_103541020_103541200_103541492_103541599_103541789_103541893_103542731_103542823_103545847_103545917_103546384_103546499_103547504
ENSMUSG00000032725.11_0	chr7	-	612	4	FSM	ENSMUSG00000032725.11	ENST00000449475.6	629	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCCTTTATGACATCT	NA	NA	NA	NA	NA	NA	NA	NA	101493035	101489476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101489606_101489797_101489934_101490018_101490205_101492874
ENSMUSG00000032727.15_13	chr13	+	5093	12	ISM	ENSMUSG00000032727.15	ENST00000381213.7	5128	13	1503	5	1475	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTCCTGGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	111824359	111855122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848222_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_2	chr13	+	5123	13	FSM	ENSMUSG00000032727.15	ENST00000381213.7	5128	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTCCTGGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	111822856	111855122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_111822889_111824361_111824387_111827769_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848222_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032727.15_21	chr13	+	5062	11	ISM	ENSMUSG00000032727.15	ENST00000381213.7	5128	13	4917	5	4889	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTTTTCCTGGGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	111827773	111855122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_111827916_111840162_111840298_111841755_111841877_111842535_111842622_111843171_111843248_111844747_111844900_111846259_111846342_111848222_111848315_111850774_111850903_111850978_111851122_111851217
ENSMUSG00000032733.7_0	chr9	-	4549	2	FSM	ENSMUSG00000032733.7	ENSMUST00000050916.7	4571	2	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGTGTAATAGAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	56835644	56824487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_56825989_56832596
ENSMUSG00000032735.16_0	chr18	-	3984	20	FSM	ENSMUSG00000032735.16	ENST00000326685.11	3998	20	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCACAAAAGGAACTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	62044913	61932401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941510_61942002_61942033_61944381_61944530_61946612_61946678_61947268_61947404_61949992_61950041_61952861_61952989_61956937_61957010_61959571_61959631_61972760_61972849_61978860_61978955_61982368_61982496_61988273_61988387_61990072_61990257_62004636_62004775_62044299_62044403_62044749
ENSMUSG00000032735.16_12	chr18	-	2004	21	FSM	ENSMUSG00000032735.16	ENST00000508983.5	2010	21	1	5	1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTCTATACATATAGATG	NA	NA	NA	NA	NA	NA	NA	NA	62044360	61934361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941510_61942002_61942033_61944381_61944530_61946612_61946678_61947268_61947404_61949992_61950041_61952861_61952989_61953437_61953468_61954943_61955100_61956937_61957010_61959571_61959631_61972760_61972849_61978860_61978955_61982368_61982496_61988273_61988387_61990072_61990257_62004636_62004775_62044299
ENSMUSG00000032735.16_9	chr18	-	1048	8	FSM	ENSMUSG00000032735.16	ENST00000517451.5	1069	8	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCTATCCTGACACGC	NA	NA	NA	NA	NA	NA	NA	NA	61947703	61934320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61934480_61938136_61938218_61939447_61939519_61941450_61941510_61942002_61942033_61944381_61944530_61946612_61946678_61947268
ENSMUSG00000032737.14_0	chr7	-	4959	29	FSM	ENSMUSG00000032737.14	ENSMUST00000035836.14	4995	29	18	18	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGGAAAAGGAAAACCATT	NA	NA	NA	NA	NA	NA	NA	NA	101487418	101471856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101487095
ENSMUSG00000032737.14_2	chr7	-	4692	29	FSM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	16	22	16	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAATAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101486994	101471867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777_101486159_101486927
ENSMUSG00000032737.14_9	chr7	-	4628	28	ISM	ENSMUSG00000032737.14	ENSMUST00000165052.8	4730	29	853	18	853	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAGGAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	101486157	101471863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_101472611_101472719_101472854_101473099_101473767_101475167_101475309_101475399_101475479_101475712_101475869_101475960_101476049_101476457_101476547_101476646_101476761_101477405_101477496_101477610_101477693_101477967_101478057_101478155_101478256_101478360_101478500_101478782_101478880_101479259_101479378_101479881_101480079_101480177_101480281_101480573_101480681_101480765_101480917_101481019_101481119_101481234_101481325_101481427_101481522_101481681_101481823_101482056_101482178_101482742_101482894_101482981_101483046_101485777
ENSMUSG00000032740.18_1	chr11	+	9360	32	FSM	ENSMUSG00000032740.18	ENSMUST00000040182.13	9376	32	14	2	14	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	29323671	29460806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_44	chr11	+	8897	34	FSM	ENSMUSG00000032740.18	ENST00000413716.7	8912	34	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTAACAAATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	29323988	29460798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29453959_29454180_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_48	chr11	+	9125	33	FSM	ENSMUSG00000032740.18	ENST00000436346.7	9140	33	10	5	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATTGTTACAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	29323990	29460806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29457694
ENSMUSG00000032740.18_76	chr11	+	6503	33	FSM	ENSMUSG00000032740.18	ENST00000642200.1	6523	33	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTAACAAATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	29323993	29460798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_29324411_29324506_29324608_29350183_29350293_29372539_29372610_29374771_29374831_29379332_29379417_29380111_29380253_29397895_29398069_29401021_29401104_29403118_29403278_29405369_29405517_29406457_29406603_29410848_29411034_29411710_29411849_29413119_29414191_29415610_29415739_29420314_29420457_29427293_29427459_29430489_29430652_29432108_29432387_29432597_29432742_29435824_29436012_29439581_29439728_29443699_29443793_29443878_29444094_29447342_29447427_29448408_29448613_29449334_29449407_29450975_29451057_29453382_29453652_29453851_29454312_29457124_29457224_29460305
ENSMUSG00000032741.10_0	chr5	-	4688	28	FSM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	17	7	17	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACCCGGCTGCAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120726721	120672224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120726567
ENSMUSG00000032741.10_5	chr5	-	2818	28	FSM	ENSMUSG00000032741.10	ENST00000541517.5	2823	28	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAACCAGCTTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	120768893	120673993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249_120723494_120768840
ENSMUSG00000032741.10_6	chr5	-	2753	27	ISM	ENSMUSG00000032741.10	ENSMUST00000046426.10	4712	28	3252	1781	3252	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCCAGAAATAACCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	120723486	120673998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_120674290_120675625_120675707_120675876_120676017_120677067_120677153_120677274_120677344_120677853_120677901_120678638_120678755_120679942_120680033_120680519_120680592_120681409_120681518_120682477_120682551_120683139_120683194_120683322_120683380_120685513_120685559_120685999_120686064_120686335_120686385_120687555_120687681_120687990_120688108_120691507_120691608_120691817_120691877_120692340_120692376_120693197_120693287_120693932_120694064_120694536_120694651_120695834_120696012_120698280_120698409_120723249
ENSMUSG00000032743.16_0	chr7	+	6140	28	FSM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAATAGAGTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125307086	125473957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_125307121_125327480_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ENSMUSG00000032743.16_2	chr7	+	6101	27	ISM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	20396	11	20396	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTAAGAATAGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125327482	125473954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_125327537_125352144_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ENSMUSG00000032743.16_3	chr7	+	6052	26	ISM	ENSMUSG00000032743.16	ENSMUST00000069660.13	6148	28	45056	8	45056	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAGAATAGAGTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	125352142	125473957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_125352222_125359472_125359643_125360923_125361022_125369743_125369876_125394387_125394653_125396745_125396878_125411951_125412122_125412764_125412831_125413952_125414060_125415750_125415854_125419139_125419356_125428900_125429039_125441751_125442626_125449470_125450176_125451108_125451318_125453731_125453811_125459699_125459878_125464416_125464583_125465497_125465656_125466774_125466840_125467910_125468022_125469814_125469955_125471322_125471425_125471858_125472020_125472103_125472193_125472618
ENSMUSG00000032744.5_0	chr4	+	4518	5	FSM	ENSMUSG00000032744.5	ENSMUST00000040821.5	4537	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGAACCTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	123127359	123143660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123127740_123133923_123133991_123135155_123135240_123136816_123136899_123139755
ENSMUSG00000032745.19_0	chr13	-	3270	11	FSM	ENSMUSG00000032745.19	ENST00000514387.6	3285	11	9	6	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	111626405	111562217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111623956_111624905_111626251
ENSMUSG00000032745.19_11	chr13	-	3287	12	FSM	ENSMUSG00000032745.19	ENSMUST00000091236.11	3299	12	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGTCACCTTTCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	111626556	111562471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032745.19_2	chr13	-	3681	13	FSM	ENSMUSG00000032745.19	ENSMUST00000047627.14	3694	13	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATATTGTTGTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	111626636	111562217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_111563186_111570081_111570185_111572930_111573119_111574490_111574659_111575637_111575779_111577165_111577351_111584429_111584490_111585466_111585534_111589557_111589782_111589906_111590031_111603384_111603505_111623956_111624905_111626251
ENSMUSG00000032754.15_0	chr5	+	2882	16	FSM	ENSMUSG00000032754.15	ENSMUST00000068326.14	2898	16	9	7	9	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTACCAGAAGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120649241	120672082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUSG00000032754.15_3	chr5	+	2773	15	FSM	ENSMUSG00000032754.15	ENSMUST00000111890.9	2775	15	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGTACCAGAAGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120649299	120672082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658838_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUSG00000032754.15_4	chr5	+	2653	14	FSM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	0	8	0	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCACACGTACCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120649316	120672077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_120649349_120651184_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUSG00000032754.15_8	chr5	+	2709	14	ISM	ENSMUSG00000032754.15	ENSMUST00000111890.9	2775	15	1891	11	-17	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTATTTCACACGTACCAG	NA	NA	NA	NA	NA	NA	NA	NA	120651190	120672073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_120651398_120657694_120657848_120657930_120657984_120658838_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120668380_120668462_120669145_120669214_120670924
ENSMUSG00000032754.15_9	chr5	+	2621	13	ISM	ENSMUSG00000032754.15	ENSMUST00000076051.12	2661	14	1868	8	-23	-7	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCACACGTACCAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	120651184	120672077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_120651398_120657694_120657848_120657930_120657984_120658667_120658726_120658845_120658952_120659032_120659201_120659818_120659927_120662063_120662124_120662268_120662400_120663723_120663866_120665805_120665928_120667574_120667729_120670924
ENSMUSG00000032757.7_0	chr6	-	1504	4	FSM	ENSMUSG00000032757.7	ENSMUST00000049166.5	1516	4	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTTGTGTGTTCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4086962	4076900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_4078037_4079960_4080018_4082457_4082583_4086776
ENSMUSG00000032763.12_0	chr10	+	2309	16	FSM	ENSMUSG00000032763.12	ENSMUST00000105384.5	2329	16	10	10	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACAGAATCTGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	78410343	78420326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_78410500_78410920_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032763.12_7	chr10	+	2219	15	FSM	ENSMUSG00000032763.12	ENSMUST00000218885.2	2233	15	9	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAGCCCAAGGACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	78410836	78420308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_78411066_78412415_78412618_78412733_78412862_78412944_78413084_78413175_78413288_78414854_78414955_78415296_78415395_78415499_78415637_78416889_78417025_78418848_78418964_78419053_78419224_78419297_78419369_78419463_78419536_78419711_78419818_78419903
ENSMUSG00000032766.10_0	chr6	+	903	2	FSM	ENSMUSG00000032766.10	ENSMUST00000031670.10	919	2	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAATGTTGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	4003910	4008436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_4004412_4008034
ENSMUSG00000032776.10_0	chr7	-	2393	19	FSM	ENSMUSG00000032776.10	ENST00000451018.7	2409	19	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTATGTGATGATAGT	NA	NA	NA	NA	NA	NA	NA	NA	71909302	71732839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_71732933_71739918_71740029_71752891_71753002_71810887_71811008_71812945_71813021_71814357_71814460_71833552_71833656_71835510_71835614_71850093_71850188_71852036_71852224_71861342_71861474_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896851_71896919_71908846
ENSMUSG00000032776.10_7	chr7	-	1346	10	FSM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGGAGCGACTGGGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71956276	71861362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896851_71896919_71908846_71909380_71956218
ENSMUSG00000032776.10_9	chr7	-	1282	9	ISM	ENSMUSG00000032776.10	ENST00000543482.5	1355	10	46902	10	-64	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGAGGAGCGACTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	71909375	71861364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_71861409_71863691_71863857_71873768_71873805_71877727_71877840_71878219_71878297_71879075_71879219_71895208_71895318_71896851_71896919_71908846
ENSMUSG00000032777.10_0	chr7	-	6562	36	FSM	ENSMUSG00000032777.10	ENSMUST00000205659.2	6570	36	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTACGTTGTGTATTGG	NA	NA	NA	NA	NA	NA	NA	NA	125306848	125240132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ENSMUSG00000032777.10_1	chr7	-	6943	37	FSM	ENSMUSG00000032777.10	ENSMUST00000055506.9	6961	37	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATGTACGTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	125306944	125240135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125240906_125241618_125241812_125242497_125242538_125243045_125243545_125244686_125244977_125245645_125245906_125246511_125246800_125247568_125247742_125250234_125250329_125251034_125251098_125253638_125253752_125255015_125255098_125256657_125256801_125258228_125258387_125261430_125261620_125261748_125261828_125262130_125262267_125262579_125262719_125266195_125266374_125266483_125266581_125267165_125267264_125268025_125268172_125268320_125268591_125268754_125268940_125269646_125269751_125271856_125272011_125273228_125273366_125275654_125275858_125276472_125276789_125277997_125278114_125280273_125280436_125292310_125292435_125295632_125295730_125298120_125298265_125298515_125298693_125303002_125303213_125306628
ENSMUSG00000032782.20_0	chr11	-	3842	19	FSM	ENSMUSG00000032782.20	ENSMUST00000092973.6	3861	19	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGTTTAATGTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	69214591	69190321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69190817_69191068_69191142_69193677_69193793_69193919_69194091_69195083_69195148_69196312_69196456_69198768_69199028_69200173_69200337_69200803_69200930_69202160_69202295_69205536_69205684_69206015_69206253_69209771_69209871_69210178_69210296_69210683_69210801_69211643_69211801_69212181_69212246_69212674_69212760_69213515
ENSMUSG00000032783.10_0	chr15	+	2634	14	FSM	ENSMUSG00000032783.10	ENSMUST00000230054.2	2639	14	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGGCAGCCAGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98972458	98981288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98972949_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUSG00000032783.10_2	chr15	+	2243	14	FSM	ENSMUSG00000032783.10	ENSMUST00000039665.8	2255	14	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGTTTGAATGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	98972862	98981276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98972974_98973230_98973380_98973488_98973679_98975168_98975327_98975409_98975548_98975712_98975793_98976127_98976205_98976664_98976784_98978746_98978831_98979071_98979132_98979715_98979851_98980006_98980587_98980789_98980984_98981108
ENSMUSG00000032786.17_1	chr9	-	3374	11	FSM	ENSMUSG00000032786.17	ENSMUST00000141118.9	3399	11	11	14	11	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAATCTAAAAACACCCC	NA	NA	NA	NA	NA	NA	NA	NA	106125842	106110670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115439_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ENSMUSG00000032786.17_6	chr9	-	2120	11	FSM	ENSMUSG00000032786.17	ENSMUST00000074082.13	2129	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTAAAATCATAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	106125055	106111134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106111397_106112586_106112750_106113638_106113908_106115273_106115436_106115841_106116022_106116730_106116916_106118314_106118538_106118834_106118985_106120360_106120595_106123957_106124178_106124983
ENSMUSG00000032788.16_0	chr10	-	5112	11	FSM	ENSMUSG00000032788.16	ENSMUST00000041616.15	5124	11	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCTTAGTGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78300801	78272581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78286116_78286201_78287312_78287418_78289307_78289363_78300594
ENSMUSG00000032788.16_7	chr10	-	1104	10	FSM	ENSMUSG00000032788.16	ENST00000468090.5	1109	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCCTCATGTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78300682	78276386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78287312_78287418_78289307_78289363_78300594
ENSMUSG00000032788.16_8	chr10	-	1021	9	ISM	ENSMUSG00000032788.16	ENST00000468090.5	1109	10	11320	0	11320	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCCTCATGTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	78289367	78276386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_78276748_78276970_78277038_78279614_78279752_78280816_78280929_78282783_78282830_78283728_78283815_78285063_78285111_78287312_78287418_78289307
ENSMUSG00000032802.9_0	chr2	+	2792	2	FSM	ENSMUSG00000032802.9	ENSMUST00000041500.8	2812	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTAGCCCAACAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151947456	151953289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151947868_151950908
ENSMUSG00000032803.16_0	chr9	-	3373	5	FSM	ENSMUSG00000032803.16	ENSMUST00000035484.11	3387	5	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGATGCTTTCTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	103243027	103230294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ENSMUSG00000032803.16_1	chr9	-	3728	5	FSM	ENSMUSG00000032803.16	ENSMUST00000116517.9	3741	5	4	9	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGATGGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	103242092	103230311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ENSMUSG00000032803.16_2	chr9	-	3080	5	FSM	ENSMUSG00000032803.16	ENSMUST00000190226.7	3107	5	18	9	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGATGGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	103242160	103230311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103232513_103233478_103233639_103237074_103237218_103241173_103241251_103241661
ENSMUSG00000032803.16_5	chr9	-	3758	5	FSM	ENSMUSG00000032803.16	ENSMUST00000072249.13	3787	5	14	15	14	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACAGTAAACCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	103242723	103230321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103233229_103233478_103233639_103237074_103237218_103241173_103241251_103242252
ENSMUSG00000032806.14_0	chrX	-	1876	3	FSM	ENSMUSG00000032806.14	ENSMUST00000114146.8	1902	3	0	26	0	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATAAAAAAAAACCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73416852	73412848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_73414618_73416219_73416289_73416814
ENSMUSG00000032806.14_1	chrX	-	1775	1	NIC	ENSMUSG00000015290.16	novel	1038	7	NA	NA	2204	-1775	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACCAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	73414620	73412845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_73412800_73414600
ENSMUSG00000032812.19_0	chr7	+	5135	34	FSM	ENSMUSG00000032812.19	ENSMUST00000107010.9	5147	34	6	6	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTATGGTGCTGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	100997279	101061095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100997407_101016227_101016306_101022162_101022709_101034068_101034248_101034758_101034824_101035355_101035481_101035598_101035749_101035996_101036067_101036312_101036434_101037193_101037397_101037820_101037928_101039270_101039471_101041042_101041129_101042653_101042837_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUSG00000032812.19_6	chr7	+	3688	21	FSM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCCTTCCTGTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	101043579	101061793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101043675_101043940_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUSG00000032812.19_7	chr7	+	3587	20	ISM	ENSMUSG00000032812.19	ENSMUST00000098243.4	3693	21	365	7	365	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCGGCTGTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	101043939	101061786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_101044116_101045267_101045403_101047502_101047639_101047902_101048006_101048685_101048882_101049189_101049242_101049334_101049499_101049598_101049812_101050089_101050196_101050596_101050745_101050829_101050917_101050998_101051068_101051265_101051384_101053171_101053286_101053486_101053633_101057253_101057337_101058320_101058372_101058497_101058562_101060126_101060277_101060510
ENSMUSG00000032815.17_1	chr8	-	4450	43	FSM	ENSMUSG00000032815.17	ENSMUST00000035495.15	4485	43	27	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATAATCTGTGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	124045288	123995046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123995289_123995483_123995577_123995681_123995818_123996028_123996102_123996598_123996705_123996970_123997034_123997943_123998080_123999058_123999172_124000886_124000992_124001075_124001136_124001206_124001313_124001870_124002044_124004998_124005084_124007930_124008060_124009356_124009431_124010747_124010925_124013208_124013291_124014799_124014991_124015124_124015222_124015462_124015534_124016099_124016237_124016537_124016652_124018135_124018213_124021744_124021795_124021870_124021932_124023032_124023122_124024505_124024566_124024648_124024745_124026748_124026860_124031030_124031165_124031476_124031619_124031991_124032069_124032488_124032602_124033163_124033228_124033868_124033903_124034452_124034536_124035243_124035357_124039322_124039397_124039759_124039856_124039978_124040113_124043101_124043196_124044800_124044911_124045213
ENSMUSG00000032816.16_0	chr9	+	6212	20	FSM	ENSMUSG00000032816.16	ENSMUST00000213533.2	6220	20	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATGTTGCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	65008773	65045220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65008881_65020540_65020895_65021581_65021724_65027499_65027637_65029061_65029203_65029932_65030089_65031057_65031472_65031893_65032059_65032566_65032705_65034039_65034211_65035749_65035987_65036061_65036164_65037844_65038029_65038625_65038754_65038890_65039062_65039207_65039346_65040332_65040439_65040921_65041151_65041754_65041920_65042393
ENSMUSG00000032826.20_0	chr3	-	5743	25	FSM	ENSMUSG00000032826.20	ENSMUST00000044443.15	5775	25	23	9	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTAAGTGTTGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	126792088	126715269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_126717621_126722313_126722497_126723370_126723536_126723646_126723731_126726586_126726876_126728174_126728428_126730268_126730413_126731386_126731519_126733720_126733796_126744383_126744406_126746137_126746171_126746825_126746949_126748632_126748759_126749518_126749748_126750904_126751002_126752531_126752737_126753301_126753514_126755899_126756055_126758586_126758812_126769699_126769804_126770493_126770597_126775448_126775594_126781792_126781866_126791501_126791601_126791972
ENSMUSG00000032834.12_0	chr10	-	3859	21	FSM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTACTGGTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78020978	78006750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891_78020005_78020904
ENSMUSG00000032834.12_1	chr10	-	3788	20	ISM	ENSMUSG00000032834.12	ENSMUST00000042556.11	3872	21	983	1	983	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTTTTGTCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78020000	78006743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_78007969_78009214_78009290_78009406_78009558_78009666_78009886_78010764_78010831_78011319_78011429_78012086_78012235_78012789_78012971_78013583_78013735_78013999_78014148_78014261_78014411_78014794_78014932_78015548_78015620_78015959_78016104_78016882_78017113_78017344_78017481_78018219_78018364_78018456_78018557_78018779_78018875_78019891
ENSMUSG00000032840.8_0	chr5	+	5640	5	FSM	ENSMUSG00000032840.8	ENSMUST00000049138.8	5649	5	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTTTTACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	118383297	118404155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118383524_118393734_118393892_118397040_118397193_118397439_118397554_118399164
ENSMUSG00000032841.16_0	chr2	-	685	7	FSM	ENSMUSG00000032841.16	ENST00000527487.1	695	7	7	3	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCTCTAACAGAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	101602643	101547716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_101547812_101564949_101565091_101571631_101571724_101577070_101577129_101588854_101588904_101601279_101601361_101602474
ENSMUSG00000032842.14_0	chr17	-	4863	21	FSM	ENSMUSG00000032842.14	ENSMUST00000167360.8	4866	21	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAAATACTATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46638946	46614146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46614579_46614838_46614952_46615082_46615181_46615255_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ENSMUSG00000032842.14_2	chr17	-	4849	20	FSM	ENSMUSG00000032842.14	ENSMUST00000047970.14	4885	20	31	5	31	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACATTCTGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	46638874	46614163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46614579_46614838_46614952_46615082_46615402_46616326_46616593_46616886_46617048_46617474_46617645_46617882_46618227_46620963_46621160_46621302_46621457_46623215_46623414_46623760_46623839_46624556_46624747_46625141_46625241_46626309_46626482_46627482_46627563_46632478_46632589_46633062_46633220_46634277_46634506_46634618_46635841_46638697
ENSMUSG00000032845.17_0	chr18	-	7400	13	FSM	ENSMUSG00000032845.17	ENSMUST00000035548.16	7428	13	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTTAAGCAAAAAGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	65527124	65398614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_65399362_65409716_65409766_65413948_65414167_65422748_65422838_65424326_65424602_65427150_65427187_65427282_65427411_65433084_65433233_65437520_65440885_65482098_65483780_65505791_65505910_65511086_65511214_65526704
ENSMUSG00000032855.7_0	chr17	+	14145	46	FSM	ENSMUSG00000032855.7	ENSMUST00000035565.5	14164	46	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCACGGGCCAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	24768935	24815475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ENSMUSG00000032855.7_24	chr17	+	10149	31	FSM	ENSMUSG00000032855.7	ENST00000532415.5	10163	31	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGCTAAAAGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24769122	24806410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806370
ENSMUSG00000032855.7_41	chr17	+	9738	29	FSM	ENSMUSG00000032855.7	ENST00000532739.1	9750	29	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGCTAAAAGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24783316	24806410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373
ENSMUSG00000032855.7_56	chr17	+	9669	28	ISM	ENSMUSG00000032855.7	ENST00000532739.1	9750	29	242	10	242	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGCTAAAAGGTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	24783556	24806410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806373
ENSMUSG00000032855.7_63	chr17	+	2940	14	FSM	ENSMUSG00000032855.7	ENST00000648391.1	2956	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGGGCTGAGTAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	24796504	24805559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800400_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435
ENSMUSG00000032855.7_9	chr17	+	13652	46	FSM	ENSMUSG00000032855.7	ENST00000262304.9	13663	46	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGTCCATTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	24769035	24815079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24769452_24783123_24783196_24783309_24783382_24783552_24783723_24783984_24784657_24784760_24784945_24786100_24786319_24786570_24786687_24787186_24787314_24787599_24787836_24788325_24789079_24790153_24790286_24790494_24790671_24790949_24791084_24791591_24795218_24795411_24795562_24796492_24796637_24796723_24797004_24797069_24797284_24797352_24797513_24797784_24797935_24798694_24798840_24798928_24799550_24799848_24800006_24800164_24800418_24800536_24800733_24804650_24804822_24804896_24805041_24805137_24805349_24805435_24805563_24806152_24806267_24806370_24806424_24806623_24806809_24806901_24806996_24809792_24809912_24809988_24810192_24810260_24810456_24810811_24810952_24811584_24811698_24812178_24812321_24812449_24812576_24812772_24812948_24813061_24813353_24813434_24813570_24813645_24813952_24814045
ENSMUSG00000032860.6_0	chr7	-	2999	3	FSM	ENSMUSG00000032860.6	ENSMUST00000037540.5	3011	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTTGCTCTCTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	100661200	100645781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100648308_100652770_100652962_100660918
ENSMUSG00000032860.6_2	chr7	-	2362	3	FSM	ENSMUSG00000032860.6	ENSMUST00000207916.2	2372	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCAACAACTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100661234	100646234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100648308_100652770_100652962_100661136
ENSMUSG00000032864.5_1	chr2	+	1716	1	ISM	ENSMUSG00000032864.5	ENSMUST00000044031.4	3424	3	4610	1486	4582	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	2935	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTGCTGTTGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	101459672	101461388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_101459700_101461400
ENSMUSG00000032867.9_0	chr5	-	4978	11	FSM	ENSMUSG00000032867.9	ENSMUST00000049474.9	5000	11	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCATCTGGCTCGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	118293512	118203034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_118206295_118206669_118206781_118208410_118208585_118215641_118215770_118230560_118230768_118233597_118233795_118251676_118251835_118263000_118263090_118266873_118267039_118280732_118280838_118293128
ENSMUSG00000032869.16_0	chr2	-	3786	7	FSM	ENSMUSG00000032869.16	ENSMUST00000042452.11	3809	7	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTAAATCATTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151583216	151557740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930
ENSMUSG00000032869.16_2	chr2	-	1369	8	FSM	ENSMUSG00000032869.16	ENSMUST00000109869.2	1384	8	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCCACGCTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151586091	151560184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_151560606_151561404_151561564_151562742_151562797_151571410_151571597_151576141_151576225_151577393_151577547_151582930_151583075_151585922
ENSMUSG00000032870.9_0	chr4	-	2891	10	FSM	ENSMUSG00000032870.9	ENSMUST00000043200.8	2905	10	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTTTTGCTCGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	120874436	120825519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120826862_120829086_120829404_120830289_120830456_120831582_120831690_120832568_120832651_120834147_120834235_120839323_120839403_120840303_120840390_120842391_120842526_120873945
ENSMUSG00000032872.17_0	chr9	+	2626	16	FSM	ENSMUSG00000032872.17	ENSMUST00000168529.9	2644	16	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCAGATTGGGACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	86904077	86959820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_86904307_86908999_86909154_86911556_86911658_86914432_86914515_86920778_86920809_86922434_86922520_86923305_86923364_86924832_86924927_86929526_86929560_86931154_86931278_86937817_86937959_86939194_86939348_86940977_86941129_86941417_86941505_86948701_86948867_86958880
ENSMUSG00000032875.9_0	chr7	-	10170	21	FSM	ENSMUSG00000032875.9	ENSMUST00000107032.3	10190	21	14	6	-9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGACACAGCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	100581300	100518964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528964_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
ENSMUSG00000032875.9_6	chr7	-	7758	21	FSM	ENSMUSG00000032875.9	ENST00000263674.4	7779	21	8	13	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTAAATGATGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	100581283	100521348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100522804_100525619_100525890_100525972_100526148_100526914_100527064_100527302_100527371_100527700_100527788_100528011_100528262_100528658_100528953_100529139_100529340_100529807_100529882_100530385_100530600_100530899_100531019_100531426_100531513_100531616_100531727_100531979_100532031_100532322_100532500_100532676_100532770_100532974_100533092_100534883_100535067_100539627_100539706_100577775
ENSMUSG00000032883.16_0	chr1	+	3939	16	FSM	ENSMUSG00000032883.16	ENSMUST00000035779.15	3950	16	7	4	-1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAGCCTCTTCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	78635548	78685456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_78635821_78640857_78640998_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_3	chr1	+	3078	14	FSM	ENSMUSG00000032883.16	ENST00000679541.1	3090	14	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGGGGAAAACAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	78635561	78684743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_78635901_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032883.16_7	chr1	+	2959	15	FSM	ENSMUSG00000032883.16	ENSMUST00000142704.8	2976	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTATGTTTTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	78635610	78684678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_78635821_78659309_78659728_78665953_78666132_78667985_78668096_78669798_78669938_78671912_78672064_78673797_78673922_78674145_78674218_78674606_78674747_78676712_78676886_78677472_78677548_78678985_78679178_78681202_78681318_78682950_78683109_78683974
ENSMUSG00000032890.18_0	chr4	+	1351	8	FSM	ENSMUSG00000032890.18	ENST00000372683.1	1362	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAAAGGAGCATCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	120712297	120748982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_120712320_120729751_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ENSMUSG00000032890.18_3	chr4	+	1319	7	ISM	ENSMUSG00000032890.18	ENSMUST00000106283.8	6437	8	10788	4794	-5304	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAAAGGAGCATCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	120729761	120748982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_120729848_120735034_120735283_120740271_120740414_120744130_120744241_120746184_120746287_120746551_120746692_120748491
ENSMUSG00000032892.15_0	chr11	-	800	5	FSM	ENSMUSG00000032892.15	ENSMUST00000038644.5	820	5	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGAACATAATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	68864662	68863322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68863568_68863768_68863855_68863942_68864100_68864266_68864384_68864467
ENSMUSG00000032897.18_0	chr4	-	1917	10	FSM	ENSMUSG00000032897.18	ENSMUST00000043429.12	1932	10	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGAATCTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	120682894	120614640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682726
ENSMUSG00000032897.18_34	chr4	-	1366	9	FSM	ENSMUSG00000032897.18	ENST00000427410.6	1377	9	11	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTGTGGTTGAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	120682896	120615075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120615494_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120638668_120638741_120647573_120647687_120682730
ENSMUSG00000032897.18_8	chr4	-	2261	10	FSM	ENSMUSG00000032897.18	ENST00000372652.5	2279	10	9	9	-1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCTTGTTTTCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	120672910	120614659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120615773_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120672658
ENSMUSG00000032897.18_9	chr4	-	1843	10	FSM	ENSMUSG00000032897.18	ENST00000456393.6	1862	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAATCTTGTTTTCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	120682846	120614659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120615491_120616528_120616589_120618824_120618933_120622410_120622570_120625922_120626097_120630868_120630965_120636316_120636431_120638668_120638741_120647573_120647687_120682730
ENSMUSG00000032898.10_0	chr5	+	3936	12	FSM	ENSMUSG00000032898.10	ENSMUST00000202447.4	3959	12	13	10	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACCATGCCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	118114807	118148256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138381_118138594_118140079_118140238_118146074
ENSMUSG00000032898.10_1	chr5	+	3866	12	FSM	ENSMUSG00000032898.10	ENSMUST00000035579.10	3883	12	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAACCATGCCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	118114856	118148256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_118115105_118115922_118116059_118117805_118117901_118124163_118124286_118126842_118126990_118127188_118127326_118128867_118129005_118132546_118132727_118133434_118133568_118138402_118138594_118140079_118140238_118146074
ENSMUSG00000032899.15_0	chr6	-	2458	10	FSM	ENSMUSG00000032899.15	ENST00000075503.8	2462	10	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACAATGAGAATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	131330500	131276184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131277555_131278587_131278685_131279285_131279327_131281669_131281885_131284033_131284118_131286845_131287028_131287895_131288163_131289413_131289549_131289881_131289896_131330447
ENSMUSG00000032899.15_1	chr6	-	2385	8	ISM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	1248	80	1248	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACAATGAGAATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	131289542	131276184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_131277555_131278587_131278685_131279285_131279327_131281669_131281885_131284033_131284118_131286845_131287028_131287895_131288163_131289413
ENSMUSG00000032899.15_2	chr6	-	2407	9	FSM	ENSMUSG00000032899.15	ENSMUST00000049150.8	3380	9	893	80	893	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACAATGAGAATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	131289897	131276184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_131277555_131278587_131278685_131279285_131279327_131281669_131281885_131284033_131284118_131286845_131287028_131287895_131288163_131289413_131289549_131289881
ENSMUSG00000032902.2_0	chr3	+	4417	5	FSM	ENSMUSG00000032902.2	ENSMUST00000046212.2	4426	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATATTACTTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	104545992	104565778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104546145_104556573_104556834_104558201_104558346_104560057_104560904_104562763
ENSMUSG00000032905.6_0	chr18	-	4746	4	FSM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCTAATGCTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	46874635	46863218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46867577_46868321_46868385_46870461_46870599_46874447
ENSMUSG00000032905.6_3	chr18	-	502	3	FSM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTCTGTAAAAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	46868381	46867086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46867106_46867153_46867577_46868321
ENSMUSG00000032905.6_4	chr18	-	440	2	ISM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	810	2	810	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTCTGTAAAAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	46867574	46867086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_46867106_46867153
ENSMUSG00000032905.6_5	chr18	-	631	4	FSM	ENSMUSG00000032905.6	ENST00000509910.2	648	4	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTCTGTAAAAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	46870587	46867086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46867106_46867153_46867577_46868321_46868385_46870461
ENSMUSG00000032905.6_6	chr18	-	485	2	ISM	ENSMUSG00000032905.6	ENST00000500945.2	507	3	1	69	1	-69	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTAGTTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46868383	46867153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_46867577_46868321
ENSMUSG00000032905.6_7	chr18	-	419	1	ISM	ENSMUSG00000032905.6	ENSMUST00000035648.6	4765	4	7074	3943	812	-69	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTAGTTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46867572	46867153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_46867200_46867600
ENSMUSG00000032905.6_8	chr18	-	612	3	ISM	ENSMUSG00000032905.6	ENST00000509910.2	648	4	15	69	15	-69	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTAGTTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46870587	46867153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_46867577_46868321_46868385_46870461
ENSMUSG00000032911.7_0	chr9	+	8108	10	FSM	ENSMUSG00000032911.7	ENSMUST00000035661.7	8121	10	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATAGACTCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	56772328	56807153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56772562_56790840_56791005_56792518_56796071_56797341_56797825_56798273_56798451_56799598_56799798_56799900_56800036_56800138_56800306_56803875_56804060_56804339
ENSMUSG00000032911.7_2	chr9	+	1135	4	FSM	ENSMUSG00000032911.7	ENST00000559989.1	1153	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGCTGAGGTAAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	56795750	56800293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56796071_56797341_56797825_56798273_56798451_56800138
ENSMUSG00000032913.14_1	chr3	-	7070	18	FSM	ENSMUSG00000032913.14	ENSMUST00000046316.11	7099	18	20	9	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATGATTCTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	104419136	104361304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104365281_104368716_104369005_104369974_104370125_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ENSMUSG00000032913.14_2	chr3	-	5966	8	FSM	ENSMUSG00000032913.14	ENSMUST00000199070.5	5991	8	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATGATTCTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	104419127	104361304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104418771
ENSMUSG00000032913.14_6	chr3	-	3939	18	FSM	ENSMUSG00000032913.14	ENSMUST00000198332.2	3946	18	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATTGACCTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104419169	104364447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104365281_104368716_104369005_104369974_104370104_104371174_104371625_104372802_104373085_104374358_104374680_104375800_104375965_104387097_104387167_104387424_104387497_104389170_104389252_104397845_104397990_104398183_104398328_104398726_104398871_104399004_104399149_104401373_104401509_104401946_104402022_104404804_104404871_104418771
ENSMUSG00000032925.17_0	chr14	+	1836	10	NIC	ENSMUSG00000032925.17	novel	4065	11	NA	NA	9	-8	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	2301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAGTATTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	123897502	124211068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_123897819_123898702_123898921_124077974_124078098_124081208_124081350_124083850_124083992_124094844_124094992_124191982_124192100_124204042_124204190_124209529_124209644_124210696
ENSMUSG00000032925.17_11	chr14	+	1863	11	FSM	ENSMUSG00000032925.17	ENSMUST00000049681.14	4065	11	240	1962	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAGTATTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	123897622	124211068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_123897819_123898702_123898921_124065163_124065311_124077974_124078098_124081208_124081350_124083850_124083992_124094844_124094992_124191982_124192100_124204042_124204190_124209529_124209644_124210696
ENSMUSG00000032925.17_17	chr14	+	1804	11	NIC	ENSMUSG00000032925.17	novel	1820	11	NA	NA	8	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAGTATTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	123897620	124211068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_+_123897828_123898772_123898921_124065163_124065311_124077974_124078098_124081208_124081350_124083850_124083992_124094844_124094992_124191982_124192100_124204042_124204190_124209529_124209644_124210696
ENSMUSG00000032932.16_0	chr16	-	4223	5	FSM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATCAAGAAGAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75563702	75551916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831_75562173_75563622
ENSMUSG00000032932.16_1	chr16	-	4141	4	ISM	ENSMUSG00000032932.16	ENSMUST00000046283.16	4237	5	1535	11	1505	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTATATCAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75562174	75551920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_75555337_75556302_75556471_75557983_75558198_75561831
ENSMUSG00000032939.15_0	chr8	+	2745	22	FSM	ENSMUSG00000032939.15	ENST00000308159.10	2758	22	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTAGGTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	94941185	95041515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94941265_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032939.15_1	chr8	+	2702	22	FSM	ENSMUSG00000032939.15	ENSMUST00000079961.14	2707	22	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94941193	95041485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94941260_94954290_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032939.15_12	chr8	+	2866	20	FSM	ENSMUSG00000032939.15	ENST00000564887.5	2880	20	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTATTTCTTTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	94993295	95041470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94993852_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032939.15_9	chr8	+	2635	21	FSM	ENSMUSG00000032939.15	ENSMUST00000109547.2	2847	21	3	209	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCTTTTTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94954291	95041485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94954484_94970281_94970400_95007898_95007962_95013116_95013246_95019295_95019371_95021648_95021739_95023077_95023218_95027387_95027521_95028695_95028854_95030227_95030394_95030787_95030882_95031867_95032060_95032652_95032780_95032901_95032975_95033229_95033275_95034468_95034586_95035531_95035651_95036215_95036334_95036926_95037011_95038160_95038290_95041212
ENSMUSG00000032940.17_0	chr16	+	814	5	FSM	ENSMUSG00000032940.17	ENST00000400577.4	834	5	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATACTAGCGAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	75389833	75397776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_75389932_75393401_75393565_75395057_75395131_75395662_75395760_75397393
ENSMUSG00000032948.11_0	chr16	-	736	7	FSM	ENSMUSG00000032948.11	ENST00000680801.1	755	7	7	12	7	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCCAGAAAGGTAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75368281	75347086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_75347252_75352669_75352782_75355454_75355560_75357614_75357678_75359153_75359244_75362418_75362521_75368182
ENSMUSG00000032952.12_0	chr3	+	2692	11	FSM	ENSMUSG00000032952.12	ENSMUST00000076599.8	2692	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	103716835	103729339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103716971_103717183_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUSG00000032952.12_1	chr3	+	2723	9	FSM	ENSMUSG00000032952.12	ENSMUST00000106823.8	2741	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGGAAGTTGGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	103716925	103729331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUSG00000032952.12_2	chr3	+	2784	10	FSM	ENSMUSG00000032952.12	ENSMUST00000047285.7	2799	10	13	2	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGGTGCCTGTCGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	103716956	103729339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103717374_103719400_103719626_103720092_103720224_103720575_103720724_103722140_103722638_103725075_103725160_103726119_103726224_103727569_103727778_103727993_103728276_103728651
ENSMUSG00000032959.13_0	chr5	-	1225	4	FSM	ENSMUSG00000032959.13	ENSMUST00000036951.13	1240	4	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGACCTGCGGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	117425679	117420722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_117421531_117423785_117423887_117424199_117424310_117425473
ENSMUSG00000032965.12_0	chr16	+	2585	11	FSM	ENSMUSG00000032965.12	ENSMUST00000046777.11	2601	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTAGTACCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	49519605	49585483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_49519913_49522216_49522380_49523512_49523632_49526453_49526545_49532201_49532271_49557034_49557158_49578757_49578830_49579679_49579812_49581316_49581380_49582963_49583031_49584104
ENSMUSG00000032966.15_0	chr2	+	1646	5	FSM	ENSMUSG00000032966.15	ENSMUST00000044011.12	1658	5	10	2	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	151384412	151403610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151384665_151384737_151384786_151399305_151399419_151401377_151401541_151402540
ENSMUSG00000032966.15_6	chr2	+	1410	4	FSM	ENSMUSG00000032966.15	ENST00000618612.5	1419	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGTGTCATGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	151384535	151403610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_151384665_151384737_151384786_151401377_151401541_151402540
ENSMUSG00000032977.10_1	chr10	-	2382	6	FSM	ENSMUSG00000032977.10	ENSMUST00000045454.9	2394	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGCAGTCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	77351610	77322497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77324308_77325831_77325901_77333196_77333348_77339679_77339749_77350139_77350249_77351436
ENSMUSG00000032987.10_0	chr15	+	4496	3	FSM	ENSMUSG00000032987.10	ENSMUST00000217517.2	4535	3	31	8	31	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAATAAGCTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	98350499	98358268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98350825_98351898_98351978_98354176
ENSMUSG00000032997.17_0	chr1	-	2871	4	FSM	ENSMUSG00000032997.17	ENSMUST00000079205.14	2892	4	9	12	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAGAATAATGAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75455906	75451224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75455435
ENSMUSG00000032997.17_1	chr1	-	3048	5	FSM	ENSMUSG00000032997.17	ENSMUST00000094818.4	3065	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTAGAATAATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	75455941	75451225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75452871_75453203_75453384_75453888_75454463_75454913_75455057_75455435
ENSMUSG00000032998.17_0	chr4	+	4775	13	FSM	ENSMUSG00000032998.17	ENSMUST00000044564.15	4789	13	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTATTTGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	119396862	119486307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119467186_119467289_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ENSMUSG00000032998.17_1	chr4	+	4643	12	FSM	ENSMUSG00000032998.17	ENSMUST00000106310.9	4660	12	10	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTATTTGCAGCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	119396894	119486309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_119397043_119417799_119417861_119430672_119430998_119442946_119443022_119459605_119459690_119473704_119473834_119476480_119476662_119477131_119477546_119478797_119478900_119480417_119480610_119482093_119482202_119483485
ENSMUSG00000033004.17_0	chr14	-	15163	84	FSM	ENSMUSG00000033004.17	ENST00000357337.11	15181	84	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAATATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103584207	103350857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103407292_103407473_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ENSMUSG00000033004.17_2	chr14	-	15265	85	FSM	ENSMUSG00000033004.17	ENST00000683697.1	15283	85	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAATATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103584207	103350857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103398276_103398379_103407292_103407473_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ENSMUSG00000033004.17_28	chr14	-	14978	83	FSM	ENSMUSG00000033004.17	ENST00000544440.7	15001	83	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAATATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103584202	103350857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103351672_103354490_103354657_103355476_103355585_103357941_103358152_103359950_103360059_103360747_103360937_103361834_103361939_103364057_103364191_103364499_103364629_103365348_103365451_103367366_103367487_103368678_103368776_103371217_103371502_103372469_103372737_103373994_103374076_103376155_103376255_103376672_103376913_103378306_103378373_103380179_103380405_103380578_103380736_103381689_103381851_103383335_103383486_103384268_103384469_103385943_103386102_103389555_103389724_103391361_103391607_103392181_103392352_103392559_103394204_103410002_103410126_103411222_103411356_103412201_103412427_103419789_103419931_103422267_103422385_103423019_103423118_103425934_103426051_103429002_103429059_103432019_103432230_103433673_103433819_103434680_103434854_103436075_103436126_103436868_103436957_103437509_103437629_103438647_103438874_103441757_103441977_103442612_103442714_103444071_103444215_103446184_103446364_103448693_103448826_103449958_103450166_103452755_103452948_103457362_103457585_103460345_103460621_103461702_103461896_103462854_103462952_103464906_103464991_103466790_103466926_103469961_103470054_103479547_103479676_103479757_103479884_103480479_103480653_103485182_103485337_103485797_103486003_103489844_103489963_103497631_103497714_103500137_103500258_103506793_103506902_103513224_103513327_103513808_103513955_103520033_103520239_103522685_103522845_103524641_103524807_103525978_103526184_103526979_103527057_103528453_103528593_103528724_103528799_103532595_103532693_103534328_103534401_103534615_103534859_103536102_103536300_103543625_103543780_103551734_103551951_103561105_103561182_103583651
ENSMUSG00000033009.16_0	chr8	+	5299	13	FSM	ENSMUSG00000033009.16	ENSMUST00000109556.9	5310	13	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCTATGGTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	94763831	94794544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94764071_94765592_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ENSMUSG00000033009.16_2	chr8	+	5209	13	FSM	ENSMUSG00000033009.16	ENSMUST00000060632.8	5214	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGCTATGGTGGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	94763918	94794544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94764071_94765595_94765739_94773899_94773947_94778702_94778804_94781231_94781349_94781880_94781973_94782163_94782293_94782671_94782786_94784343_94784424_94784677_94784992_94789594_94789718_94790096_94790156_94790806
ENSMUSG00000033014.13_0	chr3	+	4998	19	FSM	ENSMUSG00000033014.13	ENSMUST00000106860.6	5025	19	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACACAGATTCCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	103187212	103262869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103187763_103217624_103217744_103218139_103218285_103218696_103218830_103228860_103228978_103231960_103232076_103233403_103233551_103234107_103234226_103236353_103236629_103237395_103237561_103238925_103239124_103244714_103244848_103246595_103246660_103248875_103249036_103251609_103251960_103253960_103254085_103255636_103255712_103259318_103259472_103261012
ENSMUSG00000033015.17_1	chr11	+	407	3	FSM	ENSMUSG00000033015.17	ENST00000443306.1	421	3	7	7	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTGAAGGTGCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	25307477	25317132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_25307653_25315542_25315595_25316952
ENSMUSG00000033016.17_2	chr18	-	3097	9	FSM	ENSMUSG00000033016.17	ENST00000397790.6	3107	9	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTAAGTTACTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80756262	80649803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80651241_80678905_80679292_80693046_80693180_80696720_80696777_80706509_80706651_80708496_80708670_80710172_80710376_80725373_80725534_80755854
ENSMUSG00000033016.17_5	chr18	-	2070	8	FSM	ENSMUSG00000033016.17	ENST00000587635.5	2084	8	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTGAGAGTGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	80756019	80693024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80693180_80696720_80696777_80706509_80706651_80708581_80708670_80710172_80710376_80725373_80725534_80740769_80741872_80755854
ENSMUSG00000033020.8_0	chr15	+	876	5	FSM	ENSMUSG00000033020.8	ENSMUST00000230271.2	885	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGTTACCTGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79025217	79035974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79025635_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033020.8_6	chr15	+	483	5	FSM	ENSMUSG00000033020.8	ENST00000470701.1	493	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAAACCTCACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	79025612	79035943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79025668_79028793_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033020.8_9	chr15	+	419	4	ISM	ENSMUSG00000033020.8	ENST00000470701.1	493	5	3190	10	3190	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAATAAACCTCACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	79028802	79035943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_79028864_79030252_79030384_79035535_79035608_79035788
ENSMUSG00000033021.17_1	chr1	+	1535	13	FSM	ENSMUSG00000033021.17	ENSMUST00000037796.14	1539	13	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGACTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	75412577	75419818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75412656_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033021.17_4	chr1	+	1682	14	FSM	ENSMUSG00000033021.17	ENSMUST00000113584.8	1692	14	3	7	3	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTGGAGCCAGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	75412589	75419810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75412656_75412789_75412957_75413421_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033021.17_9	chr1	+	1780	13	FSM	ENSMUSG00000033021.17	ENST00000358215.8	1794	13	10	4	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCAGCTTGGACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	75412627	75419815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75412967_75413434_75413483_75413580_75413679_75414894_75414999_75415485_75415673_75415988_75416049_75417055_75417187_75418118_75418254_75418373_75418472_75418628_75418676_75418828_75418922_75419087_75419257_75419544
ENSMUSG00000033029.13_0	chr15	-	1153	5	FSM	ENSMUSG00000033029.13	ENSMUST00000187550.7	1168	5	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGTGCCACCTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79025373	79018855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79019423_79019552_79019654_79019836_79019966_79023437_79023501_79025080
ENSMUSG00000033029.13_2	chr15	-	1243	7	FSM	ENSMUSG00000033029.13	ENSMUST00000169604.8	1249	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCCCTGACATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	79025453	79018866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79019423_79019552_79019654_79019836_79019966_79020506_79020690_79023437_79023501_79025080_79025193_79025354
ENSMUSG00000033031.14_0	chr16	+	3957	22	FSM	ENSMUSG00000033031.14	ENSMUST00000117994.8	3977	22	17	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTTTAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	48814564	48840065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826201_48826401_48826424_48827424_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ENSMUSG00000033031.14_2	chr16	+	3955	21	FSM	ENSMUSG00000033031.14	ENSMUST00000048374.6	3974	21	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAACATTTTAGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	48814566	48840065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_48814743_48817733_48817882_48819317_48819431_48820623_48820719_48821353_48821451_48821928_48822052_48822154_48822301_48824289_48824366_48824631_48824848_48826050_48826211_48827412_48827555_48829440_48829541_48831071_48831191_48833537_48833734_48834159_48834235_48834327_48834439_48835255_48835453_48836306_48836421_48836641_48836725_48837714_48837855_48838737
ENSMUSG00000033032.16_0	chr18	-	3455	18	FSM	ENSMUSG00000033032.16	ENST00000296721.9	3479	18	12	12	12	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAGGAAAATCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	61891788	61863178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888742_61889910_61890006_61890722_61890807_61891670
ENSMUSG00000033032.16_4	chr18	-	3416	19	FSM	ENSMUSG00000033032.16	ENSMUST00000120472.2	3444	19	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGAGGTCAGAGGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	61919749	61863335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61864382_61866774_61866904_61868638_61868818_61869853_61870019_61870566_61870679_61871754_61871828_61872194_61872341_61874700_61874913_61876348_61876502_61876737_61876832_61879848_61879942_61881766_61881947_61884736_61884949_61885579_61885679_61888633_61888746_61889910_61890006_61890722_61890807_61891670_61891800_61919646
ENSMUSG00000033036.10_0	chr5	+	749	1	FSM	ENSMUSG00000033036.10	ENSMUST00000122204.3	774	1	6	19	3	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	44070491	44071240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_44070500_44071200
ENSMUSG00000033036.10_1	chr5	+	618	2	FSM	ENSMUSG00000033036.10	ENSMUST00000200338.2	635	2	0	17	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGCAAAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	44070488	44071235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_44070851_44070979
ENSMUSG00000033039.11_0	chr15	+	6701	16	FSM	ENSMUSG00000033039.11	ENSMUST00000040320.10	6712	16	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACTGAATCTGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78993164	79021090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78993630_78998854_78998904_78999229_78999372_79003935_79004028_79004958_79005102_79006746_79007187_79008700_79008759_79009449_79009875_79011126_79011534_79014008_79014144_79014662_79014790_79014908_79015000_79015137_79015212_79015973_79016089_79016252_79016300_79017199
ENSMUSG00000033047.6_0	chr15	+	1926	13	FSM	ENSMUSG00000033047.6	ENSMUST00000040518.6	1942	13	10	6	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGTTTGTGGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78959388	78978599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78959493_78959970_78960020_78961030_78961242_78962273_78962354_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUSG00000033047.6_13	chr15	+	1810	11	FSM	ENSMUSG00000033047.6	ENST00000406934.5	1821	11	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGCTGGGTTTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	78959898	78978595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78960020_78961030_78961242_78963192_78963255_78965786_78965857_78966053_78966128_78968311_78968484_78969756_78969912_78970633_78970805_78973663_78974162_78977536_78977618_78978400
ENSMUSG00000033054.8_0	chr9	+	6061	18	NNC	ENSMUSG00000033054.8	novel	6062	18	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGCTCTATGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53448346	53485642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482478_53483870
ENSMUSG00000033054.8_1	chr9	+	6049	18	FSM	ENSMUSG00000033054.8	ENSMUST00000035850.8	6062	18	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATAGCTCTATGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	53448359	53485642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_53448489_53456467_53456587_53460209_53460271_53461337_53461411_53462897_53462939_53463549_53463775_53465184_53465273_53466356_53466442_53467687_53467780_53467867_53467956_53469424_53469522_53470381_53470508_53473341_53474977_53478016_53478133_53478215_53478325_53481186_53481248_53481346_53482479_53483870
ENSMUSG00000033055.13_0	chr15	-	1889	8	FSM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTGTTTTTTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78947071	78937294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942254_78945363_78945412_78946672
ENSMUSG00000033055.13_2	chr15	-	622	8	FSM	ENSMUSG00000033055.13	ENST00000406423.5	627	8	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTCCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78962663	78938203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363_78945412_78962617
ENSMUSG00000033055.13_3	chr15	-	307	4	FSM	ENSMUSG00000033055.13	ENST00000609454.5	317	4	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTCCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78940283	78938203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78938285_78938695_78938804_78939694_78939743_78940213
ENSMUSG00000033055.13_5	chr15	-	575	7	ISM	ENSMUSG00000033055.13	ENST00000406423.5	627	8	17253	5	1675	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTCCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78945410	78938203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154_78942249_78945363
ENSMUSG00000033055.13_6	chr15	-	531	6	ISM	ENSMUSG00000033055.13	ENSMUST00000040676.11	1904	8	4834	910	-1963	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTCCTTGCTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	78942251	78938203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_78938285_78938695_78938804_78939491_78939617_78939694_78939743_78940213_78940286_78942154
ENSMUSG00000033059.8_0	chr2	+	3898	20	FSM	ENSMUSG00000033059.8	ENSMUST00000045441.8	3909	20	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGTATCTGCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	150628664	150673677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150629031_150643457_150643560_150648112_150648192_150650716_150650821_150653173_150653306_150655310_150655423_150655840_150655924_150656905_150657050_150657537_150657631_150658669_150658817_150659557_150659722_150660765_150660881_150661793_150661896_150662654_150662803_150665895_150665955_150668248_150668391_150669024_150669233_150670363_150670499_150671547_150671615_150672281
ENSMUSG00000033060.17_1	chr14	+	6067	31	FSM	ENSMUSG00000033060.17	ENSMUST00000100337.10	6092	31	16	9	16	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTCTTTATTGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	101967408	102172137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_101967662_102031676_102031748_102044889_102044960_102078307_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102122726_102123009_102124372_102125093_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102168607_102168717_102170005_102170109_102171331
ENSMUSG00000033060.17_11	chr14	+	5749	27	FSM	ENSMUSG00000033060.17	ENSMUST00000159314.8	5774	27	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAGGAATGCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	102078104	102172119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_102078415_102112887_102112919_102114241_102114356_102118238_102118438_102121597_102121851_102122726_102123009_102124372_102125093_102126112_102126143_102133902_102134021_102135992_102136136_102137506_102138081_102139499_102139806_102148201_102148317_102149434_102149597_102150675_102150783_102151712_102151774_102153123_102153181_102155066_102155093_102155375_102155481_102156047_102156141_102156644_102157088_102157924_102157991_102159532_102159586_102163531_102163746_102166611_102166888_102170005_102170109_102171331
ENSMUSG00000033063.9_0	chr13	-	1998	11	FSM	ENSMUSG00000033063.9	ENST00000617422.4	2019	11	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATCAGACAGATTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	65035599	64911789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64912096_64919769_64919968_64920482_64920603_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506
ENSMUSG00000033063.9_1	chr13	-	2278	13	FSM	ENSMUSG00000033063.9	ENST00000377659.1	2298	13	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATCAGACAGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	65035602	64911791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64912096_64919769_64919968_64920482_64920603_64926603_64926711_64929539_64929712_64933032_64933174_64935516_64935779_64940112_64940260_64941042_64941228_64941977_64942182_64946880_64947029_65006411_65006606_65035506
ENSMUSG00000033065.15_0	chr15	+	2811	23	FSM	ENSMUSG00000033065.15	ENSMUST00000163507.8	2816	23	2	3	2	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTTGGGCGCTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97990471	98030325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97990547_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_19	chr15	+	2842	23	FSM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATAAATGCCAGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	98006423	98030301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98006554_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_28	chr15	+	2755	22	ISM	ENSMUSG00000033065.15	ENST00000551339.6	2863	23	3609	-20	3609	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTCTTGTTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	98010022	98030332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_3	chr15	+	2798	23	FSM	ENSMUSG00000033065.15	ENSMUST00000230445.2	2798	23	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCTCTTGTTATTATCT	NA	NA	NA	NA	NA	NA	NA	NA	97990524	98030332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97990547_98010001_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033065.15_8	chr15	+	2861	23	FSM	ENSMUSG00000033065.15	ENSMUST00000051226.8	2879	23	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGTTTTGGGCGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	98006364	98030322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98006493_98010034_98010128_98016062_98016137_98017273_98017352_98018671_98018862_98019077_98019244_98020099_98020145_98020510_98020620_98020732_98020829_98021026_98021120_98021676_98021803_98022906_98022972_98023430_98023495_98024184_98024335_98024733_98024805_98025318_98025407_98025487_98025641_98026059_98026225_98027146_98027209_98027602_98027715_98029299_98029400_98029482_98029589_98029795
ENSMUSG00000033066.17_0	chr11	+	7057	14	FSM	ENSMUSG00000033066.17	ENSMUST00000108682.9	7067	14	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTTCAGTGCCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	67477368	67579813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67477642_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67550844_67550935_67552876_67552993_67556213_67556289_67561419_67561499_67565063_67565193_67566424_67566549_67572050_67572131_67573460_67573560_67574163
ENSMUSG00000033066.17_2	chr11	+	734	7	FSM	ENSMUSG00000033066.17	ENST00000396115.6	745	7	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAGAAGGGGCTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	67487399	67574330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67487526_67493933_67494055_67520435_67520517_67534106_67534193_67543684_67543739_67573460_67573560_67574163
ENSMUSG00000033068.17_0	chr2	+	2530	14	FSM	ENSMUSG00000033068.17	ENSMUST00000094467.6	2540	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTTGCCTCATTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	150590971	150613595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150591154_150594929_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150607369_150607472_150608878_150609017_150610784_150610842_150612211_150612325_150612548
ENSMUSG00000033068.17_4	chr2	+	1299	12	FSM	ENSMUSG00000033068.17	ENST00000433259.6	1305	12	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAGCTGAGCCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	150594967	150612642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150595254_150597962_150598040_150600662_150600807_150602022_150602099_150603152_150603189_150604295_150604385_150605485_150605566_150606034_150606100_150608878_150609017_150610784_150610870_150612195_150612325_150612548
ENSMUSG00000033075.18_0	chr15	-	6559	18	FSM	ENSMUSG00000033075.18	ENSMUST00000044189.16	6575	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGAACTCCCTGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	97991617	97936632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97945073_97945154_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ENSMUSG00000033075.18_5	chr15	-	4279	18	FSM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGAGGATAAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97990827	97938677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97990583
ENSMUSG00000033075.18_6	chr15	-	4087	18	FSM	ENSMUSG00000033075.18	ENST00000549518.6	4088	18	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGAGGATAAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97991215	97938677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966_97985015_97991163
ENSMUSG00000033075.18_7	chr15	-	4032	17	ISM	ENSMUSG00000033075.18	ENST00000448372.5	4290	18	5826	1	5826	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAGAGGATAAGTCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	97985011	97938677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_97940834_97943183_97943280_97943739_97943825_97943964_97944020_97946066_97946271_97954709_97954842_97956076_97956233_97956784_97956870_97957796_97957836_97962699_97962755_97964284_97964557_97964638_97964743_97973689_97973862_97974430_97974591_97980123_97980209_97982850_97982982_97984966
ENSMUSG00000033083.17_0	chr14	-	6478	19	FSM	ENSMUSG00000033083.17	ENSMUST00000161991.8	6483	19	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTTTTTGCTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	101846464	101679795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700521_101703036_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ENSMUSG00000033083.17_3	chr14	-	3962	18	FSM	ENSMUSG00000033083.17	ENST00000648194.1	3976	18	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTGATATTTAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	101745126	101681242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523
ENSMUSG00000033083.17_5	chr14	-	4785	20	FSM	ENSMUSG00000033083.17	ENST00000431480.6	4800	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTGATATTTAAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	101846056	101681242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101682208_101684962_101685140_101686637_101686808_101689853_101690014_101692282_101692528_101695501_101695661_101696170_101696330_101700310_101700512_101703030_101703201_101712512_101712678_101714415_101714643_101716566_101716642_101724863_101724984_101726947_101727059_101727288_101727381_101731781_101731915_101738447_101738553_101742543_101742634_101744523_101745127_101845398
ENSMUSG00000033088.20_0	chr15	+	7172	24	FSM	ENSMUSG00000033088.20	ENSMUST00000109689.9	7187	24	10	5	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCTCTGTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	78831933	78890062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78832249_78832380_78832539_78835103_78835256_78841304_78841405_78842426_78842573_78844054_78844275_78845148_78845306_78850493_78852787_78856734_78856847_78857451_78858493_78860666_78860745_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUSG00000033088.20_1	chr15	+	7307	25	FSM	ENSMUSG00000033088.20	ENSMUST00000109690.11	7327	25	13	7	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCTCTGTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	78831936	78890062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78832249_78832380_78832539_78835103_78835256_78841304_78841405_78842426_78842573_78844054_78844275_78845148_78845306_78850493_78852787_78856734_78856847_78857451_78858493_78860666_78860745_78862813_78862952_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUSG00000033088.20_5	chr15	+	2555	14	FSM	ENSMUSG00000033088.20	ENSMUST00000109687.9	2570	14	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGCTCTGTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	78867253	78890062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78867409_78872091_78872149_78875016_78875086_78875184_78875275_78875528_78875639_78877103_78877633_78878241_78878353_78883996_78884145_78885720_78885824_78886247_78886408_78886484_78886599_78887905_78887993_78888644_78888806_78889401
ENSMUSG00000033096.8_0	chr2	-	2212	9	FSM	ENSMUSG00000033096.8	ENSMUST00000046399.7	2235	9	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAACCCACTTTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	150450474	150425009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150426109_150427682_150427876_150428300_150428436_150428911_150429087_150430822_150430940_150431952_150432046_150436221_150436338_150442163_150442281_150450307
ENSMUSG00000033099.11_0	chr15	+	3696	6	FSM	ENSMUSG00000033099.11	ENSMUST00000138880.9	3721	6	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGATGAAAACAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	78819143	78827824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78819276_78820678_78820785_78821333_78821383_78822007_78822151_78824265_78824367_78824659
ENSMUSG00000033102.16_0	chr13	-	1922	15	FSM	ENSMUSG00000033102.16	ENSMUST00000221634.2	1953	15	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCAAATGTGTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	64422777	64337087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64337273_64338102_64338167_64349145_64349263_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ENSMUSG00000033102.16_1	chr13	-	5843	14	FSM	ENSMUSG00000033102.16	ENSMUST00000039318.16	5859	14	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTCTTTTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64422795	64340367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ENSMUSG00000033102.16_4	chr13	-	2879	14	FSM	ENSMUSG00000033102.16	ENSMUST00000109769.10	2886	14	5	2	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64396451	64343173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64344490_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64396218
ENSMUSG00000033102.16_5	chr13	-	3039	15	FSM	ENSMUSG00000033102.16	ENSMUST00000109770.2	3052	15	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64422680	64343173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64344490_64349145_64349263_64353084_64353232_64356920_64357019_64357739_64357900_64358008_64358148_64363313_64363545_64364025_64364114_64367699_64367763_64368493_64368561_64373385_64373463_64391447_64391541_64394338_64394415_64395041_64395133_64422404
ENSMUSG00000033105.13_0	chr10	+	4655	22	FSM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAGTTAATCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	76367444	76391305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76367509_76367683_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ENSMUSG00000033105.13_3	chr10	+	4584	21	ISM	ENSMUSG00000033105.13	ENSMUST00000048678.7	4667	22	250	8	250	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATAGTTAATCAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	76367690	76391305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_76367853_76369346_76369486_76371392_76371502_76372077_76372200_76374185_76374283_76375618_76375755_76376145_76376255_76376679_76376799_76377652_76377751_76378301_76378330_76379684_76379742_76380298_76380371_76381284_76381336_76381895_76382046_76382596_76382694_76383268_76383375_76385053_76385120_76385636_76385718_76386418_76386590_76388153_76388233_76388770
ENSMUSG00000033106.7_0	chr8	-	1212	5	FSM	ENSMUSG00000033106.7	ENSMUST00000035925.7	1246	5	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTCCATCCCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	106937539	106927356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106927782_106928862_106928984_106930962_106931173_106936996_106937264_106937350
ENSMUSG00000033107.7_0	chr18	+	1388	6	FSM	ENSMUSG00000033107.7	ENSMUST00000234316.2	1406	6	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCAACAACTTCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	21094537	21116772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_21094858_21107355_21107513_21110785_21110881_21112107_21112199_21114227_21114336_21116155
ENSMUSG00000033111.17_0	chr14	-	2439	5	FSM	ENSMUSG00000033111.17	ENSMUST00000224389.2	2444	5	5	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10185504	10166531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185429
ENSMUSG00000033111.17_1	chr14	-	2253	4	ISM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	1167	2	3	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCTCAGAAAAAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10184374	10166641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294
ENSMUSG00000033111.17_2	chr14	-	2477	6	FSM	ENSMUSG00000033111.17	ENSMUST00000112669.10	2477	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10185554	10166531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10169980_10170042_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ENSMUSG00000033111.17_3	chr14	-	2425	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223631.2	1014	5	5	-1416	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10184375	10166531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10169980_10170042_10172106_10172182_10182369_10182494_10184294
ENSMUSG00000033111.17_4	chr14	-	2450	5	FSM	ENSMUSG00000033111.17	ENSMUST00000163392.3	2452	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGGTGTTTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10185588	10166531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185505
ENSMUSG00000033111.17_5	chr14	-	2285	5	FSM	ENSMUSG00000033111.17	ENSMUST00000223762.2	2292	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAACCTCTCAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10185541	10166646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184376_10185505
ENSMUSG00000033111.17_6	chr14	-	880	6	FSM	ENSMUSG00000033111.17	ENSMUST00000223702.2	900	6	14	6	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACGGCCCTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	10185514	10167784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168192_10168274_10168365_10168516_10168616_10172106_10172182_10182369_10182494_10185429
ENSMUSG00000033111.17_8	chr14	-	1189	5	FSM	ENSMUSG00000033111.17	ENSMUST00000225294.2	1191	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACGGCCCTCTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	10185505	10167785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10168616_10172106_10172182_10182369_10182494_10184294_10184379_10185429
ENSMUSG00000033114.12_0	chr13	-	2285	12	FSM	ENSMUSG00000033114.12	ENSMUST00000099441.6	2303	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATTGACTTGGTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	64277160	64244130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64245499_64246128_64246212_64247083_64247163_64252546_64252615_64254828_64254922_64256138_64256242_64259329_64259399_64260743_64260816_64266229_64266298_64268408_64268496_64270132_64270167_64276999
ENSMUSG00000033124.17_15	chr1	-	4030	16	FSM	ENSMUSG00000033124.17	ENSMUST00000188347.7	4041	16	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGTTGTGGCATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75168830	75157509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75167466_75167525_75168467
ENSMUSG00000033124.17_2	chr1	-	3745	15	FSM	ENSMUSG00000033124.17	ENST00000396761.6	3764	15	12	7	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGATCTGGTTGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	75168683	75157515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75158576_75159235_75159382_75159537_75159761_75161099_75161218_75161332_75161512_75161696_75161946_75162309_75162490_75162594_75162749_75162833_75163583_75164328_75164471_75164588_75164751_75166206_75166272_75166755_75166800_75166946_75167079_75168541
ENSMUSG00000033126.6_0	chr10	-	4500	5	FSM	ENSMUSG00000033126.6	ENSMUST00000049185.6	4522	5	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGACAGTCTCTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76304931	76295405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_76299154_76300090_76300160_76302070_76302200_76303990_76304221_76304607
ENSMUSG00000033128.10_0	chr15	+	3026	17	FSM	ENSMUSG00000033128.10	ENSMUST00000041587.8	3034	17	7	1	7	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	78761396	78778784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78773202_78773311_78773915_78774069_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_20	chr15	+	2339	14	ISM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	3483	1	3483	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	78765242	78778784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033128.10_8	chr15	+	2402	15	FSM	ENSMUSG00000033128.10	ENST00000325180.12	2403	15	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGCTGCTCTTGTCACCC	NA	NA	NA	NA	NA	NA	NA	NA	78761759	78778784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78761818_78765237_78765323_78766327_78766404_78767467_78767567_78768284_78768409_78769455_78769557_78770063_78770145_78772310_78772449_78772617_78772700_78775636_78775702_78776113_78776287_78776652_78776841_78777366_78777537_78777738_78777850_78777933
ENSMUSG00000033147.17_1	chr3	-	914	6	FSM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGAGAGATGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	101831439	101787322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620_101822834_101831347
ENSMUSG00000033147.17_2	chr3	-	825	5	ISM	ENSMUSG00000033147.17	ENST00000369502.1	926	6	8611	4	8611	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGAGAGATGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	101822836	101787322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_101787504_101790775_101790906_101804425_101804591_101805252_101805386_101822620
ENSMUSG00000033149.18_0	chr16	-	5466	17	FSM	ENSMUSG00000033149.18	ENST00000412622.5	5487	17	11	10	11	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGAAACACTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	45665181	45566602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664901
ENSMUSG00000033149.18_1	chr16	-	3772	15	FSM	ENSMUSG00000033149.18	ENST00000495180.1	3788	15	6	10	6	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGAAACACTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	45630723	45566602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45630644
ENSMUSG00000033149.18_3	chr16	-	5174	16	FSM	ENSMUSG00000033149.18	ENST00000393923.7	5194	16	10	10	10	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGAAACACTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	45646446	45566602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45621854_45621993_45623058_45623203_45628488_45628873_45645121
ENSMUSG00000033149.18_4	chr16	-	5594	18	FSM	ENSMUSG00000033149.18	ENST00000431670.7	5616	18	12	10	12	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGGAAACACTTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	45665180	45566602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664901
ENSMUSG00000033149.18_62	chr16	-	5466	18	FSM	ENSMUSG00000033149.18	ENSMUST00000036355.13	5483	18	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCATTCACAGTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45664730	45566611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45568295_45569089_45569176_45571708_45571929_45577461_45577609_45578479_45578571_45583272_45583478_45591034_45591135_45592497_45592639_45595306_45595451_45598075_45598166_45600618_45600730_45601664_45601821_45609351_45609481_45621854_45621993_45623058_45623203_45628488_45628873_45645121_45646459_45664570
ENSMUSG00000033152.14_0	chr6	-	1994	8	FSM	ENSMUSG00000033152.14	ENSMUST00000038409.12	1994	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGCCTCCACGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88851027	88819546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998_88842272_88850986
ENSMUSG00000033152.14_1	chr6	-	1937	7	ISM	ENSMUSG00000033152.14	ENSMUST00000038409.12	1994	8	8772	0	8772	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGCCTCCACGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88842255	88819546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998
ENSMUSG00000033152.14_2	chr6	-	2180	8	FSM	ENSMUSG00000033152.14	ENSMUST00000061262.11	2195	8	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGCCTCCACGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88851564	88819546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998_88842272_88851337
ENSMUSG00000033152.14_3	chr6	-	2048	8	FSM	ENSMUSG00000033152.14	ENSMUST00000145944.3	2065	8	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCGCTAAGACGCGCGG	NA	NA	NA	NA	NA	NA	NA	NA	88852018	88819569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88819959_88820488_88820669_88822047_88822110_88822514_88822672_88825716_88825792_88826176_88826971_88841998_88842272_88851900
ENSMUSG00000033157.18_0	chr16	-	2825	5	FSM	ENSMUSG00000033157.18	ENSMUST00000066983.13	2848	5	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAAGAACTGTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45563305	45550097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45552323_45557255_45557394_45557886_45557999_45560681_45560866_45563139
ENSMUSG00000033157.18_4	chr16	-	639	4	FSM	ENSMUSG00000033157.18	ENST00000494817.1	656	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGGCATGAAGGATGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	45560857	45552165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45552379_45557255_45557394_45557886_45557999_45560681
ENSMUSG00000033159.15_0	chr1	-	3655	9	FSM	ENSMUSG00000033159.15	ENSMUST00000168720.8	3669	9	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTTTCCAGAAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	75119268	75111197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701
ENSMUSG00000033159.15_3	chr1	-	2045	8	FSM	ENSMUSG00000033159.15	ENSMUST00000190679.7	2062	8	14	3	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75118321	75112414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059
ENSMUSG00000033159.15_5	chr1	-	2429	10	FSM	ENSMUSG00000033159.15	ENSMUST00000041213.12	2429	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTGGCCTTTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	75119341	75112414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75113577_75113969_75114088_75114398_75114461_75115990_75116120_75116202_75116324_75116464_75116547_75117541_75117651_75118059_75118148_75118701_75119205_75119286
ENSMUSG00000033161.11_1	chr3	-	3656	23	FSM	ENSMUSG00000033161.11	ENSMUST00000036493.8	3679	23	17	6	17	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGCTTTTGAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	101511983	101483540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511718
ENSMUSG00000033161.11_8	chr3	-	3670	23	FSM	ENSMUSG00000033161.11	ENST00000537345.5	3683	23	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAACGGAATTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	101511519	101483550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_101483901_101484234_101484327_101486309_101486412_101486836_101486968_101487089_101487236_101488462_101488587_101489040_101489196_101489317_101489487_101490003_101490155_101491060_101491198_101492038_101492215_101493442_101493636_101494131_101494267_101496321_101496432_101497082_101497282_101497762_101498032_101498436_101498555_101498655_101498791_101499096_101499211_101499693_101499898_101501518_101501579_101502313_101502425_101511230
ENSMUSG00000033166.12_0	chr14	-	5125	21	FSM	ENSMUSG00000033166.12	ENSMUST00000042471.11	5150	21	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAGAAAAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	99337198	99312658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_99314902_99315697_99315821_99316563_99316723_99316823_99316993_99317100_99317316_99318661_99318819_99320085_99320173_99321462_99321591_99323309_99323395_99323482_99323548_99324824_99324927_99325169_99325287_99326197_99326345_99327053_99327192_99327400_99327515_99328763_99328929_99332608_99332777_99334192_99334267_99335020_99335215_99336118_99336277_99336881
ENSMUSG00000033170.15_0	chr15	-	4719	21	FSM	ENSMUSG00000033170.15	ENSMUST00000164826.8	4726	21	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAGTTGGTGACCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	78687239	78659341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78661031_78661664_78661778_78662158_78662275_78662397_78662557_78663594_78663689_78664441_78664512_78664676_78664921_78665272_78665385_78665674_78665835_78671555_78671680_78672045_78672075_78672921_78673038_78673930_78674057_78675240_78675433_78677085_78677212_78678052_78678209_78679408_78679601_78683295_78683622_78685832_78685971_78686580_78686833_78687054
ENSMUSG00000033174.18_1	chr6	+	3666	8	FSM	ENSMUSG00000033174.18	ENSMUST00000113585.9	3676	8	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCCTGTGTCTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	88701400	88805339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88701554_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88795555_88795646_88800172_88800389_88802632
ENSMUSG00000033174.18_2	chr6	+	2234	7	FSM	ENSMUSG00000033174.18	ENST00000453507.6	2255	7	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCCTGTCGATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	88702048	88804038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_88702161_88702682_88702828_88741577_88741685_88784992_88785130_88786317_88786429_88800172_88800389_88802632
ENSMUSG00000033177.14_0	chr16	-	2210	15	FSM	ENSMUSG00000033177.14	ENST00000419127.5	2224	15	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTATATGAGGATAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	45506796	45476744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45476942_45478405_45478543_45481002_45481272_45482516_45482689_45483631_45483749_45484534_45484646_45487914_45488023_45489815_45489953_45494235_45494343_45498216_45498330_45499624_45499756_45500882_45501112_45503771_45503963_45504933_45505002_45506673
ENSMUSG00000033182.13_0	chr6	-	4566	5	ISM	ENSMUSG00000033182.13	ENSMUST00000120933.5	4644	6	8507	9	-434	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACAATTGCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	88595917	88522104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_88524898_88563761_88563960_88588272_88588424_88590875_88591147_88594764
ENSMUSG00000033182.13_1	chr6	-	4635	6	FSM	ENSMUSG00000033182.13	ENSMUST00000120933.5	4644	6	0	9	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAACAATTGCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	88604424	88522104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88524898_88563761_88563960_88588272_88588424_88590875_88591147_88594764_88595941_88604378
ENSMUSG00000033184.15_0	chr18	-	1326	3	FSM	ENSMUSG00000033184.15	ENSMUST00000151189.2	1348	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAACCAAATGTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	46730589	46721107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46721756_46726315_46726562_46730157
ENSMUSG00000033186.10_0	chr14	-	2225	3	FSM	ENSMUSG00000033186.10	ENSMUST00000042662.10	2240	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGCCTTGTCCTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	99283545	99271983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_99273947_99277950_99278097_99283429
ENSMUSG00000033191.15_0	chr4	-	3432	22	FSM	ENSMUSG00000033191.15	ENST00000372476.8	3457	22	13	12	13	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGAAAAGATCCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	118343848	118328602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_118328790_118329768_118329869_118329988_118330086_118330164_118330206_118331306_118331378_118331492_118331611_118332620_118332812_118333007_118333119_118333256_118333468_118335594_118335786_118336058_118336350_118336809_118337101_118337298_118337437_118337607_118337767_118339452_118339598_118339843_118339990_118340943_118341073_118341272_118341414_118341544_118341677_118341813_118341970_118343383_118343495_118343573
ENSMUSG00000033192.6_0	chr8	+	1580	14	FSM	ENSMUSG00000033192.6	ENST00000262134.10	1599	14	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAATGGCCAAATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	93582094	93645584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93582254_93591528_93591669_93596275_93596494_93597765_93597879_93599675_93599737_93600860_93600920_93602182_93602218_93606027_93606083_93613193_93613277_93615900_93616027_93617300_93617455_93635814_93635914_93640870_93640965_93645400
ENSMUSG00000033207.8_0	chr19	-	3403	14	FSM	ENSMUSG00000033207.8	ENSMUST00000036069.8	3414	14	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACTACATACTTTCATGT	NA	NA	NA	NA	NA	NA	NA	NA	23425757	23279978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_23281051_23281175_23281261_23288125_23288386_23308249_23308403_23311354_23311449_23327962_23328229_23330667_23330812_23336513_23336608_23341073_23341331_23351281_23351420_23354629_23354715_23356026_23356299_23424943_23425058_23425388
ENSMUSG00000033208.8_0	chr10	+	1471	3	FSM	ENSMUSG00000033208.8	ENSMUST00000036387.8	1484	3	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTAAATTACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	76089688	76096982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76089793_76092860_76093007_76095761
ENSMUSG00000033208.8_1	chr10	+	1369	2	ISM	ENSMUSG00000033208.8	ENSMUST00000036387.8	1484	3	3172	11	3172	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTCTAAATTACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	76092858	76096982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_76093007_76095761
ENSMUSG00000033209.18_0	chr5	+	10767	24	FSM	ENSMUSG00000033209.18	ENSMUST00000040111.10	10780	24	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAATGCTGTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	111027673	111437637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111325485_111325579_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ENSMUSG00000033209.18_1	chr5	+	10674	23	FSM	ENSMUSG00000033209.18	ENSMUST00000156290.9	10688	23	5	9	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAATGCTGTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	111027673	111437637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_111027855_111040697_111040977_111232887_111233036_111248559_111248833_111249835_111249967_111330789_111331298_111370975_111372318_111373423_111373948_111377213_111377324_111378915_111379046_111381111_111381331_111383341_111383508_111414400_111414542_111419060_111419206_111424027_111424208_111424649_111425371_111426341_111426467_111427824_111428057_111428540_111428618_111429745_111429770_111430636_111430767_111431810_111431919_111432857
ENSMUSG00000033210.17_0	chr16	+	2572	19	FSM	ENSMUSG00000033210.17	ENST00000487372.5	2586	19	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAGAACAGCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45363499	45413853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_45363620_45365052_45365219_45367962_45368089_45370436_45370599_45373261_45373362_45375997_45376173_45376948_45377031_45378504_45378672_45380581_45380708_45393690_45393789_45395680_45395801_45398086_45398283_45400437_45400624_45401846_45401997_45403316_45403369_45404703_45404853_45409864_45409991_45411153_45411253_45413681
ENSMUSG00000033213.17_0	chr2	+	727	4	FSM	ENSMUSG00000033213.17	ENSMUST00000110512.4	751	4	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTAAAACATGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	122479848	122482995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122480054_122480176_122480263_122481135_122481197_122482620
ENSMUSG00000033214.11_0	chr14	+	4485	3	FSM	ENSMUSG00000033214.11	ENST00000325089.7	4494	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAATTATTTTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111913519	111921301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_111913713_111916369_111920527_111921166
ENSMUSG00000033216.10_0	chr6	-	2664	7	FSM	ENSMUSG00000033216.10	ENSMUST00000165242.4	2679	7	9	6	-3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGCAGGCTGTGATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	88423512	88234321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88235374_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000033216.10_3	chr6	-	2181	8	FSM	ENSMUSG00000033216.10	ENSMUST00000205179.3	2208	8	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGACCTAGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	88423487	88234859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88235374_88249003_88249084_88258530_88258688_88274558_88275219_88332464_88332630_88335527_88335625_88353185_88353394_88423187
ENSMUSG00000033222.17_0	chr3	-	4486	22	ISM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	138	1	138	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100876841	100846176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748
ENSMUSG00000033222.17_1	chr3	-	4540	23	FSM	ENSMUSG00000033222.17	ENSMUST00000076941.12	4541	23	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGGTGATGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	100876979	100846176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_100847429_100849142_100849218_100850972_100851056_100852030_100852182_100853207_100853267_100854713_100854885_100855460_100855595_100856396_100856480_100857150_100857243_100857499_100857654_100858317_100858500_100859864_100859971_100861506_100861658_100863501_100863622_100865179_100865262_100866501_100866630_100868566_100868750_100869016_100869132_100869868_100870784_100871371_100871442_100874321_100874409_100876748_100876852_100876935
ENSMUSG00000033227.8_0	chr1	+	2051	4	FSM	ENSMUSG00000033227.8	ENSMUST00000006716.8	2071	4	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGCAACGAAACTACTT	NA	NA	NA	NA	NA	NA	NA	NA	74811056	74824467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74811382_74821260_74821482_74821718_74822054_74823297
ENSMUSG00000033228.9_0	chr15	-	5748	15	FSM	ENSMUSG00000033228.9	ENSMUST00000047835.8	5766	15	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTGAATAAAGTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	96358712	96311542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96312798_96312912_96313033_96313657_96313829_96314729_96315071_96315952_96318728_96319826_96319934_96321397_96321500_96322450_96322558_96322709_96322766_96329661_96329727_96330204_96330306_96332800_96332879_96341825_96341984_96344390_96344473_96358482
ENSMUSG00000033228.9_14	chr15	-	545	2	FSM	ENSMUSG00000033228.9	ENST00000395454.6	566	2	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAATCAAAATAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	96341936	96335797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96336232_96341825
ENSMUSG00000033228.9_8	chr15	-	3491	6	FSM	ENSMUSG00000033228.9	ENST00000549162.5	3509	6	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCGGGAGCACTGC	NA	NA	NA	NA	NA	NA	NA	NA	96318717	96312670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_96312798_96312912_96313033_96313609_96313829_96314729_96315071_96315952_96317534_96317614
ENSMUSG00000033237.20_0	chr15	+	8492	21	FSM	ENSMUSG00000033237.20	ENSMUST00000096250.5	8507	21	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGTTTTGGATAAG	NA	NA	NA	NA	NA	NA	NA	NA	96185461	96302866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_96185668_96185774_96185869_96186935_96187034_96247873_96248008_96254573_96254793_96256800_96256869_96259454_96259522_96259613_96259865_96260197_96260295_96260372_96260583_96261475_96261644_96264713_96264796_96266533_96266669_96267236_96267434_96267800_96270644_96276694_96276844_96288756_96288896_96288984_96289071_96290235_96290360_96290453_96290546_96299833
ENSMUSG00000033249.11_0	chr8	+	1721	13	FSM	ENSMUSG00000033249.11	ENSMUST00000036127.9	1739	13	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTTTCTGGTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105996444	106002471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105996629_105997178_105997288_105997400_105997529_105997619_105997745_105998005_105998082_105998216_105998282_105998737_105998841_105999091_105999217_105999337_105999566_106001277_106001384_106001479_106001546_106001674_106001745_106002135
ENSMUSG00000033253.19_4	chr4	-	564	4	FSM	ENSMUSG00000033253.19	ENST00000372450.8	579	4	10	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTAGGACATCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	118266463	118259604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_118259771_118260017_118260186_118262622_118262749_118266359
ENSMUSG00000033256.15_0	chr2	-	1545	6	FSM	ENSMUSG00000033256.15	ENSMUST00000110531.9	1557	6	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCACTTTCCGAGCATC	NA	NA	NA	NA	NA	NA	NA	NA	122199393	122179379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122180021_122184245_122184366_122184509_122184679_122187563_122187771_122189928_122190071_122199127
ENSMUSG00000033256.15_1	chr2	-	1436	6	FSM	ENSMUSG00000033256.15	ENST00000560471.5	1452	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCCTCAGGTGGAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	122199607	122184066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_122184366_122184511_122184679_122185955_122186097_122187563_122187771_122189928_122190071_122199127
ENSMUSG00000033257.15_0	chr1	+	3746	17	FSM	ENSMUSG00000033257.15	ENSMUST00000113678.2	3762	17	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGAGAGCCATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	74718067	74737131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74719623_74720458_74720569_74720917_74720982_74724477_74724603_74725018_74725130_74725475_74725553_74726636_74726720_74726881_74727011_74727322_74727446_74727725_74727825_74728481_74728617_74729118_74729266_74734866_74734970_74735563_74735775_74735900_74735972_74736337_74736409_74736599
ENSMUSG00000033268.9_0	chr2	+	3864	24	FSM	ENSMUSG00000033268.9	ENST00000561166.1	3888	24	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAAGTGAGAATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	122154519	122178128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122154689_122154832_122155006_122156463_122156640_122156899_122157019_122157559_122157698_122158340_122158455_122159170_122159371_122160022_122160209_122163491_122163718_122163882_122163977_122164183_122164360_122166316_122166387_122166770_122166897_122167732_122167912_122168069_122168301_122168797_122168898_122169105_122169156_122170555_122170684_122174545_122174700_122175059_122175293_122175522_122175682_122176728_122176885_122176978_122177108_122177750
ENSMUSG00000033272.13_0	chr18	+	2815	3	FSM	ENSMUSG00000033272.13	ENSMUST00000186538.7	2842	3	17	10	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTACAGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	36812284	36816904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36812677_36813568_36813668_36814580
ENSMUSG00000033272.13_1	chr18	+	2360	4	FSM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	0	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTACAGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	36812631	36816904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36812677_36813568_36813668_36814580_36814819_36814926
ENSMUSG00000033272.13_3	chr18	+	2306	3	ISM	ENSMUSG00000033272.13	ENSMUST00000050476.11	2362	4	946	2	916	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTACAGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	36813577	36816904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_36813668_36814580_36814819_36814926
ENSMUSG00000033272.13_4	chr18	+	2413	2	ISM	ENSMUSG00000033272.13	ENSMUST00000036158.7	2462	3	934	7	917	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCATGTACAGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	36813578	36816904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_36813668_36814580
ENSMUSG00000033276.19_0	chr1	+	5214	27	FSM	ENSMUSG00000033276.19	ENSMUST00000087183.11	5245	27	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAATGAAAGATGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	74640623	74676042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74640773_74641187_74641361_74642296_74642438_74642555_74642634_74644547_74644679_74648170_74648421_74649930_74650025_74650247_74650418_74650559_74650748_74651844_74651945_74655734_74655879_74661354_74661535_74662443_74662542_74662988_74663095_74664651_74664803_74665171_74665300_74665701_74665807_74666553_74666653_74666743_74666833_74667076_74667141_74667300_74667412_74670744_74670826_74671887_74672060_74672300_74672449_74672665_74672814_74673168_74673916_74674873
ENSMUSG00000033278.11_0	chr17	-	5155	33	FSM	ENSMUSG00000033278.11	ENSMUST00000037974.10	5186	33	24	7	24	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCACAGTGGGTGGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	67661044	66973948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66974677_66984995_66985132_66990365_66990530_66992608_66992735_66995245_66995378_66996338_66996513_66997419_66997570_67000457_67000594_67000766_67000922_67005360_67005478_67032734_67032833_67051714_67051752_67054095_67054173_67069123_67069212_67116460_67116649_67121265_67121293_67121461_67121537_67124820_67124973_67197918_67198052_67219347_67219423_67226018_67226056_67227017_67227292_67247477_67247581_67251122_67251325_67260062_67260173_67263804_67264114_67349089_67349384_67352978_67353154_67370036_67370153_67382583_67382663_67402418_67402691_67498243_67498367_67660951
ENSMUSG00000033278.11_2	chr17	-	3771	20	FSM	ENSMUSG00000033278.11	ENSMUST00000224091.2	3773	20	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTTTCCTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	67661452	67068071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_67068537_67069123_67069212_67116460_67116649_67121461_67121537_67124820_67124973_67179111_67179187_67197918_67198052_67226018_67226056_67227017_67227292_67247477_67247581_67251122_67251325_67260062_67260173_67263804_67264114_67349089_67349384_67352978_67353154_67370036_67370153_67382583_67382663_67402418_67402691_67498243_67498367_67660951
ENSMUSG00000033282.15_0	chr8	-	7105	23	ISM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	2240	3	2240	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGCCAGAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	92034816	91943319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979478_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669
ENSMUSG00000033282.15_1	chr8	-	7188	24	FSM	ENSMUSG00000033282.15	ENST00000262135.9	7197	24	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTTGCCAGAGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	92037050	91943319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_91946918_91947999_91948134_91951880_91951966_91959435_91959620_91975336_91975408_91977777_91977932_91979478_91979567_91979703_91979895_91987372_91987752_91990136_91990289_91996726_91997180_92000238_92000357_92000917_92001098_92001751_92001803_92002257_92002365_92007345_92007486_92012861_92012936_92014213_92014361_92016250_92016357_92025856_92026001_92027405_92027509_92031346_92031646_92034669_92034815_92036965
ENSMUSG00000033285.16_0	chr3	-	3351	26	ISM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	1191	11	1191	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATGACTTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100068532	100045506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335
ENSMUSG00000033285.16_1	chr3	-	3419	27	FSM	ENSMUSG00000033285.16	ENSMUST00000052120.14	3432	27	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATGACTTGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100069721	100045506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_100046159_100046374_100046469_100047494_100047624_100048870_100048915_100049528_100049577_100049768_100049862_100050270_100050337_100050718_100050770_100051008_100051144_100051634_100051747_100051874_100051976_100052950_100053008_100053747_100053884_100054016_100054103_100055420_100055523_100057182_100057277_100058278_100058510_100059223_100059329_100060122_100060221_100060861_100060964_100061177_100061292_100062238_100062335_100063695_100063775_100064639_100064759_100067081_100067292_100068335_100068539_100069659
ENSMUSG00000033287.17_0	chr15	+	1620	7	FSM	ENSMUSG00000033287.17	ENSMUST00000166142.10	1632	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTTTTTCTCTGGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	78312774	78323502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321783_78321872_78322686
ENSMUSG00000033287.17_5	chr15	+	1240	8	FSM	ENSMUSG00000033287.17	ENST00000402077.7	1254	8	12	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCAGGGAGGATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	78312868	78323122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321783_78321872_78322686
ENSMUSG00000033287.17_6	chr15	+	1319	9	FSM	ENSMUSG00000033287.17	ENST00000403888.7	1329	9	8	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCAGGGAGGATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	78312864	78323122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78313068_78314241_78314351_78317184_78317277_78318114_78318211_78319784_78319911_78321100_78321195_78321357_78321433_78321783_78321872_78322686
ENSMUSG00000033294.12_0	chr5	-	2059	15	FSM	ENSMUSG00000033294.12	ENSMUST00000042147.6	2075	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACTGCCTGGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	110801274	110796290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110796850_110796931_110797046_110797197_110797281_110797398_110797560_110797669_110797781_110797937_110797999_110798200_110798313_110798399_110798451_110798810_110798846_110798977_110799078_110799177_110799328_110799544_110799653_110800178_110800286_110800876_110800998_110801088
ENSMUSG00000033295.15_0	chr4	-	7634	33	FSM	ENSMUSG00000033295.15	ENSMUST00000049074.13	7656	33	14	8	14	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTAGGCCTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	118148588	118065417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_118067087_118067565_118067702_118067813_118067969_118068197_118068324_118068555_118068683_118068896_118069076_118069160_118069447_118069523_118069679_118069916_118070037_118070653_118070830_118070937_118071062_118074288_118074387_118077689_118077806_118080422_118080578_118080914_118081134_118081695_118081790_118081874_118082129_118082225_118082324_118082995_118083575_118083650_118083769_118087891_118088086_118088682_118088989_118092155_118092301_118092745_118092883_118093109_118093692_118094935_118095206_118106095_118106207_118114685_118114875_118126372_118126515_118126675_118126822_118134545_118134682_118141969_118142050_118148376
ENSMUSG00000033306.16_0	chr16	+	15453	13	FSM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAACTTGCCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24212289	24811322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_24212355_24261530_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_11	chr16	+	3878	12	FSM	ENSMUSG00000033306.16	ENSMUST00000078988.10	3894	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGAGCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24266850	24799774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_24266999_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033306.16_5	chr16	+	15386	12	ISM	ENSMUSG00000033306.16	ENSMUST00000038053.14	15459	13	49243	6	-5308	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAACTTGCCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24261532	24811322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_24261641_24275582_24275693_24378341_24378408_24426865_24427068_24480426_24480540_24500495_24500622_24580342_24581027_24663840_24663968_24708539_24708710_24790580_24790760_24795949_24796071_24797942
ENSMUSG00000033307.8_0	chr10	-	523	3	FSM	ENSMUSG00000033307.8	ENSMUST00000038169.8	544	3	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	9950	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGACCACGGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	75696064	75695197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75695378_75695520_75695694_75695894
ENSMUSG00000033308.17_0	chr3	+	4485	23	FSM	ENSMUSG00000033308.17	ENSMUST00000039177.12	4492	23	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCGTCTCCTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	118355782	119226571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_118355964_118404093_118404205_118468137_118468221_118553304_118553393_118575484_118575647_118590996_118591194_118597699_118597782_118604828_118604917_118690742_118690851_118692815_118692986_118710721_118710933_118737799_118737985_118792818_118793035_118858527_118858693_118929370_118929440_118935550_118935635_118987890_118988012_118988717_118988838_119059603_119059747_119108400_119108581_119205782_119205927_119220796_119220938_119225135
ENSMUSG00000033313.12_0	chr8	+	1892	3	FSM	ENSMUSG00000033313.12	ENSMUST00000036221.12	1901	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGATCTCGAGTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	105991288	105995958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105991393_105993326_105993798_105994641
ENSMUSG00000033316.15_0	chr5	+	2848	11	FSM	ENSMUSG00000033316.15	ENSMUST00000040001.14	2883	11	27	8	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCACACAGCCATACCT	NA	NA	NA	NA	NA	NA	NA	NA	110692247	110769233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110692809_110725305_110725487_110736107_110736275_110737634_110737810_110743931_110744130_110750446_110750565_110761943_110762130_110763262_110763401_110765703_110765800_110767030_110767199_110768373
ENSMUSG00000033318.8_0	chr10	-	2247	6	FSM	ENSMUSG00000033318.8	ENSMUST00000220440.2	2254	6	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACGGGCAAAAAAAATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	75673200	75666953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75667929_75668228_75668403_75668494_75668646_75669485_75669574_75670008_75670716_75673048
ENSMUSG00000033318.8_1	chr10	-	688	5	FSM	ENSMUSG00000033318.8	ENST00000402588.6	701	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGCAATAAAGACTCATT	NA	NA	NA	NA	NA	NA	NA	NA	75670107	75667710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75667929_75668270_75668403_75668494_75668646_75669485_75669574_75670008
ENSMUSG00000033319.6_0	chr18	-	5712	3	FSM	ENSMUSG00000033319.6	ENSMUST00000036226.6	5726	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAACTTAAGTGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46659030	46634818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_46639457_46657168_46657897_46658684
ENSMUSG00000033323.15_1	chr18	-	3699	13	FSM	ENSMUSG00000033323.15	ENSMUST00000036229.13	3713	13	8	6	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGTGTGTTCTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	80512902	80451179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80451997_80463657_80463846_80477380_80477544_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUSG00000033323.15_4	chr18	-	2920	12	FSM	ENSMUSG00000033323.15	ENST00000075430.11	2942	12	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGCTCAACGGGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	80512777	80451670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_80451997_80463657_80463846_80489100_80489311_80490638_80490781_80492455_80493464_80494369_80494537_80495519_80495611_80499168_80499320_80501911_80502041_80502416_80502511_80503144_80503229_80512447
ENSMUSG00000033327.19_0	chr17	+	2181	14	FSM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGGCACTAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34931964	34938764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34932042_34934832_34934966_34935274_34935611_34935859_34935983_34936096_34936241_34936414_34936535_34936639_34936784_34936872_34937004_34937125_34937259_34937356_34937509_34937608_34937706_34937791_34937954_34938034_34938199_34938499
ENSMUSG00000033327.19_5	chr17	+	2103	13	ISM	ENSMUSG00000033327.19	ENST00000451343.4	2196	14	2875	9	2875	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGGCACTAGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34934833	34938764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34934966_34935274_34935611_34935859_34935983_34936096_34936241_34936414_34936535_34936639_34936784_34936872_34937004_34937125_34937259_34937356_34937509_34937608_34937706_34937791_34937954_34938034_34938199_34938499
ENSMUSG00000033335.18_0	chr9	+	3055	21	FSM	ENSMUSG00000033335.18	ENSMUST00000165766.9	3063	21	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21336211	21419050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUSG00000033335.18_1	chr9	+	3026	20	NIC	ENSMUSG00000033335.18	novel	3063	21	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTCTGCAGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	21336228	21419050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21418718
ENSMUSG00000033335.18_15	chr9	+	3420	20	FSM	ENSMUSG00000033335.18	ENSMUST00000091087.13	3450	20	14	16	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAAATAAAGGGAAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	21336280	21418406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21390194_21390334_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUSG00000033335.18_5	chr9	+	3503	21	FSM	ENSMUSG00000033335.18	ENSMUST00000173397.8	3510	21	0	7	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGCTACGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	21336227	21418427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417631
ENSMUSG00000033335.18_6	chr9	+	3488	20	NIC	ENSMUSG00000033335.18	novel	3502	21	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21336242	21418436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUSG00000033335.18_9	chr9	+	3495	21	FSM	ENSMUSG00000033335.18	ENSMUST00000072362.14	3502	21	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTGTGTGGGCCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21336247	21418436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21336553_21368798_21368873_21376877_21377028_21378827_21379032_21382638_21382738_21383908_21384070_21385827_21385971_21387768_21387905_21389576_21389645_21391702_21391842_21392628_21392716_21396946_21397018_21401038_21401091_21401953_21401966_21405799_21405914_21410553_21410664_21411553_21411666_21414837_21415003_21415725_21415959_21416759_21417012_21417628
ENSMUSG00000033350.8_0	chr9	-	7319	2	FSM	ENSMUSG00000033350.8	ENSMUST00000036267.8	7328	2	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCGTTTATTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95288768	95281346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_95288527_95288629
ENSMUSG00000033352.12_0	chr11	-	3679	11	FSM	ENSMUSG00000033352.12	ENSMUST00000046963.10	3695	11	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTTCTGGTTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	65679108	65579069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65678961
ENSMUSG00000033352.12_2	chr11	-	3686	12	FSM	ENSMUSG00000033352.12	ENST00000415385.7	3703	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATATACAGGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	65679112	65579099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_65581631_65582553_65582600_65584247_65584397_65587113_65587192_65597809_65597938_65600757_65600810_65603003_65603124_65610309_65610430_65626017_65626193_65647094_65647198_65666558_65666592_65678961
ENSMUSG00000033355.7_0	chr16	+	1130	3	FSM	ENSMUSG00000033355.7	ENSMUST00000210901.2	1158	3	16	12	16	10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAACTAACAGTCACCT	NA	NA	NA	NA	NA	NA	NA	NA	23427822	23432474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23427888_23428678_23428900_23431630
ENSMUSG00000033355.7_1	chr16	+	1560	2	FSM	ENSMUSG00000033355.7	ENSMUST00000038423.6	1573	2	8	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGGACTTCGTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	23428676	23432967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23428900_23431630
ENSMUSG00000033356.4_0	chr15	-	2825	9	FSM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTATCGAATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	94441421	94420576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933_94438856_94441340
ENSMUSG00000033356.4_1	chr15	-	2746	8	ISM	ENSMUSG00000033356.4	ENSMUST00000049151.4	2840	9	2571	8	2571	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACTATCGAATTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	94438857	94420576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_94421533_94423671_94423726_94425677_94425956_94427336_94427419_94429454_94429554_94431364_94431558_94434394_94434555_94437933
ENSMUSG00000033361.14_0	chrX	+	1103	5	FSM	ENSMUSG00000033361.14	ENST00000674374.1	1114	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATTCGAATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71006569	71011545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_71006654_71009420_71009459_71010116_71010269_71010662_71011369_71011422
ENSMUSG00000033361.14_10	chrX	+	1020	4	ISM	ENSMUSG00000033361.14	ENST00000674374.1	1114	5	2855	6	-685	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATTCGAATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71009419	71011545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_71009459_71010116_71010269_71010662_71011369_71011422
ENSMUSG00000033361.14_15	chrX	+	981	3	FSM	ENSMUSG00000033361.14	ENST00000538575.5	999	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGATTCGAATGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	71010116	71011545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_71010269_71010662_71011369_71011422
ENSMUSG00000033364.14_0	chr1	-	7099	24	FSM	ENSMUSG00000033364.14	ENSMUST00000044260.11	7111	24	3	9	3	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCTCATATTAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74544959	74474678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74478638_74479118_74479258_74480690_74480761_74483571_74483688_74489653_74489715_74491845_74492013_74492986_74493243_74495237_74495380_74500724_74500890_74506073_74506154_74507425_74507544_74509695_74509887_74510454_74510579_74510713_74510846_74514144_74514304_74517205_74517291_74518810_74518909_74525139_74525215_74525777_74525957_74529248_74529350_74532063_74532236_74534788_74535013_74539114_74539260_74544818
ENSMUSG00000033365.15_0	chr4	-	3584	20	FSM	ENSMUSG00000033365.15	ENSMUST00000036156.6	3595	20	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGCCTCCTTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	117772185	117751682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117751855_117751940_117752123_117752408_117752499_117752616_117752676_117752759_117752827_117754964_117755018_117757845_117757943_117758114_117758253_117758754_117758836_117760317_117760462_117760594_117760730_117760890_117760918_117760994_117761177_117761573_117761722_117761806_117761928_117762101_117762269_117762377_117762520_117762639_117762781_117768969_117769707_117771484
ENSMUSG00000033373.17_0	chr12	+	2602	12	FSM	ENSMUSG00000033373.17	ENSMUST00000041008.10	2613	12	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTATGCTGTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76884195	76968183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76884426_76909259_76909325_76920149_76920223_76921805_76921898_76934505_76934653_76934745_76934830_76944100_76944188_76953718_76953849_76956984_76957118_76961393_76961506_76963187_76963303_76966849
ENSMUSG00000033377.15_1	chr3	-	1814	7	ISM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	15391	5	15391	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAAAATACCTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	116746776	116711930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705
ENSMUSG00000033377.15_2	chr3	-	1846	8	FSM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	0	4	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATACCTTGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	116762167	116711929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604_116741685_116746705_116746787_116762146
ENSMUSG00000033377.15_3	chr3	-	1740	6	ISM	ENSMUSG00000033377.15	ENST00000615664.1	1850	8	20481	10	20481	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTATTTAAAATACCTT	NA	NA	NA	NA	NA	NA	NA	NA	116741686	116711935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_116712283_116716883_116717985_116720821_116720933_116721049_116721084_116721223_116721289_116741604
ENSMUSG00000033379.14_0	chr4	-	986	8	FSM	ENSMUSG00000033379.14	ENSMUST00000036380.14	1000	8	9	5	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2954	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGAGGCTTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	117744517	117741527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117741839_117742300_117742492_117742825_117742878_117743000_117743071_117743264_117743343_117743472_117743557_117743786_117743836_117744366
ENSMUSG00000033382.16_0	chr18	-	5168	29	FSM	ENSMUSG00000033382.16	ENSMUST00000225661.3	5194	29	16	10	1	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACAGTAGGCACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	21029134	20950289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999264_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ENSMUSG00000033382.16_3	chr18	-	5371	29	FSM	ENSMUSG00000033382.16	ENST00000283351.10	5395	29	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTATAAATTTATTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21029424	20950373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20951369_20952280_20952371_20953934_20954081_20958023_20958126_20961525_20961706_20964506_20964566_20964666_20964736_20966006_20966104_20968002_20968151_20969803_20970247_20974584_20974740_20977180_20977308_20978634_20978710_20979505_20979637_20980174_20980370_20983954_20984064_20985686_20985912_20988001_20988134_20993489_20993596_20995951_20996053_20996524_20996676_20998083_20998200_20999006_20999261_21000816_21000911_21003655_21003810_21006939_21007115_21007671_21007762_21018119_21018315_21028967
ENSMUSG00000033386.11_0	chr3	+	2364	17	FSM	ENSMUSG00000033386.11	ENSMUST00000040260.11	2377	17	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGGCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116653121	116697123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_116653284_116659837_116659927_116671882_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033386.11_8	chr3	+	6803	15	FSM	ENSMUSG00000033386.11	ENSMUST00000195905.5	6823	15	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACACCACGTTCTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	116671887	116701818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_116672100_116674415_116674553_116675406_116675502_116676697_116676846_116678755_116678939_116684553_116684653_116685488_116685637_116689136_116689251_116690326_116690443_116692811_116692899_116694252_116694351_116694601_116694661_116695962_116696107_116696578_116696641_116696717
ENSMUSG00000033389.17_0	chr11	-	4042	21	FSM	ENSMUSG00000033389.17	ENSMUST00000047463.15	4074	21	24	8	24	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTGAGCTTGGCACATG	NA	NA	NA	NA	NA	NA	NA	NA	65053763	64892872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ENSMUSG00000033389.17_2	chr11	-	2896	22	FSM	ENSMUSG00000033389.17	ENST00000262444.13	2910	22	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGAGGGTGCAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	65053532	64893805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_64894277_64896279_64896332_64898888_64899267_64900707_64900866_64902696_64902925_64903732_64903751_64912766_64912948_64913951_64914044_64915016_64915131_64917629_64917711_64922476_64922559_64922909_64923022_64929441_64929570_64929976_64930059_64932267_64932337_64943924_64944043_64948122_64948200_64950649_64950762_64957905_64957983_64965262_64965368_64965996_64966037_65053411
ENSMUSG00000033392.17_0	chr9	+	2230	11	FSM	ENSMUSG00000033392.17	ENSMUST00000216817.2	2234	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAATGACAGAGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113570579	113671961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_113570944_113590657_113590737_113595635_113595740_113599264_113599357_113600850_113600927_113602747_113602846_113615631_113615703_113642209_113642357_113664242_113664323_113670626_113670720_113670935
ENSMUSG00000033392.17_1	chr9	+	5562	33	FSM	ENSMUSG00000033392.17	ENSMUST00000111838.10	5609	33	29	18	15	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTACATAACATTAC	NA	NA	NA	NA	NA	NA	NA	NA	113641682	113748732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_113641835_113642209_113642357_113664242_113664323_113670626_113670720_113673141_113673288_113676770_113676907_113677548_113677620_113679190_113679251_113680890_113680969_113681690_113681859_113682416_113682473_113683240_113683415_113687648_113687673_113689187_113689206_113691253_113691356_113697615_113697787_113699690_113699799_113705311_113705419_113707817_113707842_113709009_113709255_113710755_113710820_113719025_113719190_113721464_113721544_113725709_113725854_113728523_113728668_113730558_113730666_113732909_113733064_113735064_113735294_113737754_113737949_113738483_113738613_113740477_113740685_113744205_113744323_113747062
ENSMUSG00000033396.14_34	chr2	-	6990	38	FSM	ENSMUSG00000033396.14	ENST00000535302.6	7002	38	12	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTACCTATACAGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	121948861	121884332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121884542_121884860_121885013_121885846_121886003_121886177_121886267_121886546_121886716_121888823_121888932_121889902_121890037_121890180_121890319_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUSG00000033396.14_82	chr2	-	6243	32	FSM	ENSMUSG00000033396.14	ENST00000558319.5	6260	32	11	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTACAGTCATACACTA	NA	NA	NA	NA	NA	NA	NA	NA	121948862	121890583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121890851_121891402_121891543_121895389_121896138_121896725_121896941_121899219_121899383_121900349_121900458_121901345_121901547_121902535_121902791_121903326_121903487_121904984_121905094_121905775_121905982_121910713_121910880_121912335_121912403_121913880_121914043_121915375_121915522_121917343_121917451_121918613_121918818_121922637_121922849_121923445_121923622_121923896_121924025_121924938_121925003_121926066_121926248_121927736_121927913_121928581_121928738_121932126_121932260_121934388_121934535_121938517_121938967_121939173_121939312_121942196_121942390_121943495_121943721_121945088_121945271_121948601
ENSMUSG00000033400.15_0	chr3	-	9601	34	FSM	ENSMUSG00000033400.15	ENSMUST00000040603.14	9625	34	17	7	17	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAACTATTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	116601798	116533654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916_116601067_116601676
ENSMUSG00000033400.15_7	chr3	-	6973	33	FSM	ENSMUSG00000033400.15	ENSMUST00000162792.8	6978	33	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATGTGTGCCCGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	116601061	116536155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116538585_116540028_116540163_116540265_116540354_116544046_116544145_116545633_116545846_116546899_116547013_116548521_116548658_116551887_116552000_116552339_116552566_116562434_116562538_116564988_116565165_116566035_116566170_116566412_116566550_116570177_116570309_116572267_116572403_116572703_116572817_116572904_116573030_116574374_116574526_116574640_116574797_116574891_116574994_116575236_116575401_116576168_116576293_116578101_116578290_116578708_116578849_116580178_116580277_116580367_116580471_116580878_116581003_116581919_116582032_116582174_116582357_116584654_116584859_116585666_116585834_116587260_116587472_116600916
ENSMUSG00000033405.5_0	chr14	-	3564	5	FSM	ENSMUSG00000033405.5	ENSMUST00000043813.3	3579	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTAATGATCTCAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	73785674	73756323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_73759115_73760737_73760935_73762499_73762757_73769507_73769626_73785473
ENSMUSG00000033411.17_0	chr2	+	5031	13	FSM	ENSMUSG00000033411.17	ENSMUST00000036647.13	5053	13	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATATATTTCTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	121786494	121844114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUSG00000033411.17_7	chr2	+	3379	13	FSM	ENSMUSG00000033411.17	ENSMUST00000110578.8	3386	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCATTAAAAAAAATAATC	NA	NA	NA	NA	NA	NA	NA	NA	121786891	121842862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121787099_121799550_121799761_121807811_121807951_121809375_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUSG00000033411.17_9	chr2	+	1871	13	FSM	ENSMUSG00000033411.17	ENST00000558966.5	1873	13	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCTCAGTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	121787123	121841467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121787215_121799550_121799761_121807811_121807951_121809372_121809523_121811632_121811846_121817429_121817509_121819270_121819383_121823826_121823914_121834381_121834445_121834548_121834629_121837343_121837471_121838201_121838298_121841043
ENSMUSG00000033416.16_0	chr10	-	3486	6	FSM	ENSMUSG00000033416.16	ENSMUST00000039796.14	3500	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCAGCAAAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75353207	75342122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ENSMUSG00000033416.16_3	chr10	-	2820	6	FSM	ENSMUSG00000033416.16	ENSMUST00000118936.8	2843	6	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTACAGTGGTAGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	75353786	75342661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75344804_75345425_75345668_75345865_75345958_75346954_75347121_75347905_75347991_75353693
ENSMUSG00000033416.16_5	chr10	-	588	5	FSM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCAGGCTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	75353064	75344635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75344804_75345865_75345958_75346954_75347121_75347905_75347991_75352987
ENSMUSG00000033416.16_6	chr10	-	512	4	ISM	ENSMUSG00000033416.16	ENST00000447813.6	592	5	5074	3	5074	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCAGGCTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	75347991	75344635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_75344804_75345865_75345958_75346954_75347121_75347905
ENSMUSG00000033417.17_0	chr19	-	5773	9	FSM	ENSMUSG00000033417.17	ENSMUST00000081790.15	5792	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTTCCTGGGTTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	60569450	60513139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60517526_60517902_60517947_60522573_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUSG00000033417.17_2	chr19	-	1829	9	FSM	ENSMUSG00000033417.17	ENST00000369151.8	1848	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCACGATGCTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	60569232	60516869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60517526_60517902_60517947_60522569_60522713_60525851_60525942_60531447_60531551_60533883_60533980_60551599_60551703_60552605_60552733_60568765
ENSMUSG00000033419.17_0	chr9	-	4366	29	FSM	ENSMUSG00000033419.17	ENST00000195649.10	4389	29	10	13	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGCAAACGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	86762521	86647988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663758_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762291
ENSMUSG00000033419.17_1	chr9	-	4382	29	FSM	ENSMUSG00000033419.17	ENST00000369694.6	4404	29	9	13	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGCAAACGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	86762522	86647988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762291
ENSMUSG00000033419.17_3	chr9	-	4322	29	FSM	ENSMUSG00000033419.17	ENST00000439399.6	4342	29	7	13	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGCAAACGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	86762695	86647988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86649390_86651511_86651615_86655571_86655677_86656249_86656334_86657634_86657745_86659086_86659118_86663622_86663773_86665352_86665488_86672108_86672193_86673537_86673622_86674006_86674079_86674216_86674295_86674519_86674790_86675409_86675518_86680590_86680753_86680882_86680898_86686507_86686621_86688521_86688632_86691573_86691602_86697482_86697554_86703784_86703827_86707023_86707131_86717161_86717274_86718680_86718775_86720083_86720187_86720844_86720921_86721564_86721708_86761474_86761635_86762524
ENSMUSG00000033420.13_2	chr6	-	1013	14	FSM	ENSMUSG00000033420.13	ENST00000409349.7	1022	14	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGCAGCTGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	87289372	87179281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309_87285382_87289304
ENSMUSG00000033420.13_3	chr6	-	944	13	ISM	ENSMUSG00000033420.13	ENST00000409349.7	1022	14	3995	6	3995	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGCAGCTGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	87285380	87179281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_87179358_87181386_87181433_87194255_87194352_87217931_87218011_87219468_87219539_87232764_87232864_87246224_87246286_87259668_87259750_87261235_87261305_87263982_87264063_87265133_87265168_87265739_87265822_87285309
ENSMUSG00000033423.17_0	chr4	+	1706	9	FSM	ENSMUSG00000033423.17	ENSMUST00000037127.15	1719	9	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	2288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCCTTGTGTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	117407573	117531493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117407928_117410164_117410241_117421817_117422096_117439796_117439914_117446294_117446355_117450267_117450360_117472365_117472439_117506503_117506604_117530937
ENSMUSG00000033429.11_0	chr7	+	794	3	FSM	ENSMUSG00000033429.11	ENSMUST00000037205.11	828	3	23	11	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACATTCATGTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64042415	64061862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_64042592_64049916_64050255_64061582
ENSMUSG00000033429.11_1	chr7	+	378	2	FSM	ENSMUSG00000033429.11	ENSMUST00000206882.2	391	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACATTCATGTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	64042493	64061862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_64042592_64061582
ENSMUSG00000033429.11_2	chr7	+	517	3	FSM	ENSMUSG00000033429.11	ENSMUST00000206194.2	532	3	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTATATACATTCATGTA	NA	NA	NA	NA	NA	NA	NA	NA	64042525	64061857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_64042592_64049916_64050093_64061582
ENSMUSG00000033430.11_0	chr8	+	3540	3	FSM	ENSMUSG00000033430.11	ENSMUST00000052138.11	3560	3	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTTAAAAGAATTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	112738038	112747149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112738775_112741968_112742094_112744470
ENSMUSG00000033434.16_0	chr5	-	1602	10	FSM	ENSMUSG00000033434.16	ENSMUST00000077220.14	1617	10	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGGCCTGGTTTTGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	110256050	110251842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110252035_110252133_110252287_110252375_110252525_110252755_110252965_110253064_110253224_110254131_110254203_110254518_110254650_110254735_110254807_110254925_110255064_110255721
ENSMUSG00000033436.14_0	chrX	-	2282	2	FSM	ENSMUSG00000033436.14	ENST00000328766.9	2303	2	12	9	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAGAAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133707671	133704902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133706620_133707106
ENSMUSG00000033436.14_4	chrX	-	3377	6	FSM	ENSMUSG00000033436.14	ENSMUST00000035559.11	3384	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAGAAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133709745	133704902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709192_133709667
ENSMUSG00000033436.14_5	chrX	-	3647	6	FSM	ENSMUSG00000033436.14	ENSMUST00000113193.9	3666	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCAAGAAGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	133709958	133704902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133707763_133708010_133708077_133708202_133708263_133708369_133708475_133708983_133709249_133709667
ENSMUSG00000033439.13_0	chr3	-	3376	12	FSM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAACAAGGATCAATC	NA	NA	NA	NA	NA	NA	NA	NA	116408224	116374755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287_116389243_116407407
ENSMUSG00000033439.13_19	chr3	-	389	6	FSM	ENSMUSG00000033439.13	ENST00000370139.1	400	6	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTAGACACAATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	116388362	116383137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116383205_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000033439.13_3	chr3	-	1450	11	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	19874	243	3	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATATTCACCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	116388362	116374984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112_116386160_116388287
ENSMUSG00000033439.13_5	chr3	-	1377	10	ISM	ENSMUSG00000033439.13	ENSMUST00000041524.11	3402	12	22075	243	2204	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATATTCACCAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	116386161	116374984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_116375260_116376142_116376573_116378844_116378920_116379403_116379477_116382120_116382289_116383139_116383247_116383382_116383453_116383878_116383942_116385841_116385909_116386112
ENSMUSG00000033444.15_0	chr10	+	4712	16	FSM	ENSMUSG00000033444.15	ENSMUST00000218766.2	4725	16	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCTTCAGTAACAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	75047914	75146894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75048052_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ENSMUSG00000033444.15_1	chr10	+	6618	18	FSM	ENSMUSG00000033444.15	ENSMUST00000105421.10	6632	18	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTTAGAGTTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	75048226	75148568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75048324_75057863_75058038_75065604_75065703_75066515_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ENSMUSG00000033444.15_4	chr10	+	5904	15	ISM	ENSMUSG00000033444.15	ENSMUST00000040105.8	5928	16	830	7	830	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTAGTTTGTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	75066518	75148226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75066706_75076898_75077053_75080912_75082547_75084270_75084479_75093701_75093776_75094801_75094978_75097627_75097792_75099112_75099205_75103332_75103424_75109850_75109935_75112604_75112762_75115692_75115796_75143070_75143188_75143867_75143928_75145623
ENSMUSG00000033446.8_0	chr14	+	5374	1	FSM	ENSMUSG00000033446.8	ENSMUST00000044405.8	5400	1	9	17	9	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAAGAAAAATTATCACA	NA	NA	NA	NA	NA	NA	NA	NA	73475343	73480717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_73475300_73480700
ENSMUSG00000033450.9_0	chr17	+	3066	10	FSM	ENSMUSG00000033450.9	ENSMUST00000036370.8	3076	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATTATCCACACACT	NA	NA	NA	NA	NA	NA	NA	NA	8144831	8153719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8144941_8145687_8145769_8145857_8145912_8146198_8146266_8147439_8147607_8148115_8148278_8148700_8148811_8150203_8150400_8150962_8151078_8151714
ENSMUSG00000033454.7_0	chr12	+	12172	2	FSM	ENSMUSG00000033454.7	ENSMUST00000042779.4	12190	2	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACTGAAGGTAACCCGT	NA	NA	NA	NA	NA	NA	NA	NA	76417047	76443714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76417505_76431999
ENSMUSG00000033460.15_0	chrX	+	2199	5	FSM	ENSMUSG00000033460.15	ENSMUST00000113201.8	2228	5	21	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAGAAGGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133618732	133622649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133618800_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUSG00000033460.15_1	chrX	+	2286	6	FSM	ENSMUSG00000033460.15	ENSMUST00000035748.14	2303	6	0	17	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAGAAGGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133618737	133622649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133618800_133619118_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUSG00000033460.15_2	chrX	+	2077	4	FSM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAGAAGGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133618761	133622649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133618800_133619668_133619742_133620375_133620475_133620782
ENSMUSG00000033460.15_3	chrX	+	2214	5	ISM	ENSMUSG00000033460.15	ENSMUST00000035748.14	2303	6	391	17	360	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAGAAGGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133619128	133622649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_133619211_133619474_133619568_133619668_133619742_133620375_133620475_133620782
ENSMUSG00000033460.15_5	chrX	+	2041	3	ISM	ENSMUSG00000033460.15	ENSMUST00000113198.8	2085	4	905	8	898	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAGAAGGAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	133619666	133622649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_133619742_133620375_133620475_133620782
ENSMUSG00000033467.13_1	chr5	-	1398	8	FSM	ENSMUSG00000033467.13	ENSMUST00000200284.5	1405	8	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAATGCGGCCAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	109706802	109702581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705616_109706670
ENSMUSG00000033467.13_2	chr5	-	1287	8	FSM	ENSMUSG00000033467.13	ENSMUST00000044579.12	1323	8	26	10	26	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTATGCTAATGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	109706833	109702588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_109702937_109703138_109703224_109703372_109703494_109703884_109704048_109704285_109704429_109704866_109705034_109705383_109705481_109706670
ENSMUSG00000033475.16_0	chr17	-	734	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113302.10	749	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCACACTCAAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	47999098	47997575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47997934_47998112_47998214_47998823
ENSMUSG00000033475.16_1	chr17	-	568	3	FSM	ENSMUSG00000033475.16	ENSMUST00000113301.2	594	3	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAGACAGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	47998975	47997672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47997988_47998112_47998214_47998823
ENSMUSG00000033478.6_0	chr19	+	5928	17	FSM	ENSMUSG00000033478.6	ENSMUST00000036407.6	5951	17	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGTAACTTAAACAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	57349124	57378008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_57349803_57356955_57357035_57359585_57359756_57361371_57361477_57361711_57361835_57366980_57367275_57367410_57367608_57369031_57369147_57369503_57369581_57369663_57369857_57370155_57370326_57370650_57370792_57371598_57371690_57372551_57372696_57373685_57373827_57374711_57374816_57374902
ENSMUSG00000033486.15_0	chr2	-	2229	13	FSM	ENSMUSG00000033486.15	ENSMUST00000038073.5	2247	13	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCTAATGAATATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121244267	121224847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121224969_121227433_121227602_121227941_121228370_121229926_121229951_121230217_121230318_121230524_121230704_121236809_121236935_121237187_121237344_121237823_121237997_121240618_121240688_121240857_121241032_121242630_121242772_121243896
ENSMUSG00000033486.15_3	chr2	-	1005	8	FSM	ENSMUSG00000033486.15	ENST00000321596.6	1017	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGGTGAGGATGTAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	121241025	121227438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121227474_121230217_121230318_121230524_121230704_121236809_121236935_121237187_121237344_121237823_121237997_121240618_121240688_121240857
ENSMUSG00000033486.15_7	chr2	-	959	7	ISM	ENSMUSG00000033486.15	ENST00000321596.6	1017	8	18	2784	18	-2784	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCTTCTATGTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	121241014	121230217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_121230318_121230524_121230704_121236809_121236935_121237187_121237344_121237823_121237997_121240618_121240688_121240857
ENSMUSG00000033487.15_0	chr14	-	6136	26	FSM	ENSMUSG00000033487.15	ENSMUST00000089017.12	6143	26	4	3	4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATATGTTTTTTGTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	72947439	72775388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72889455_72889532_72921073_72921212_72947157
ENSMUSG00000033487.15_4	chr14	-	5725	24	FSM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	72840448	72775390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505_72836583_72840361
ENSMUSG00000033487.15_6	chr14	-	5639	23	ISM	ENSMUSG00000033487.15	ENST00000398316.7	5732	24	3872	0	3872	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATATGTTTTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	72836583	72775390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_72777922_72789911_72790040_72790821_72790989_72793586_72793800_72793897_72794182_72794278_72794429_72795073_72795188_72796419_72796596_72796681_72796788_72799037_72799157_72800923_72800993_72802045_72802185_72803536_72803624_72804749_72804925_72806281_72806407_72808874_72808929_72810729_72810869_72811791_72811852_72811962_72812121_72820396_72820456_72822014_72822285_72827193_72827432_72836505
ENSMUSG00000033488.12_1	chr1	+	690	6	FSM	ENSMUSG00000033488.12	ENST00000507834.3	699	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCCCTCAAGTAAACCC	NA	NA	NA	NA	NA	NA	NA	NA	157286317	157316065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157286423_157293281_157293392_157294735_157294818_157298185_157298297_157299757_157299987_157316012
ENSMUSG00000033488.12_2	chr1	+	926	8	FSM	ENSMUSG00000033488.12	ENST00000476232.6	937	8	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCCAAGTCTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	157286317	157316095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157286423_157289522_157289620_157291978_157292038_157292534_157292601_157293281_157293392_157298185_157298307_157299701_157299987_157316012
ENSMUSG00000033499.15_0	chr13	+	5568	18	FSM	ENSMUSG00000033499.15	ENSMUST00000188211.8	5610	18	4	38	4	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	9143920	9223986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9208586_9208839_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ENSMUSG00000033499.15_4	chr13	+	5709	17	FSM	ENSMUSG00000033499.15	ENSMUST00000091829.4	5720	17	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATGCATTTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9144019	9224478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_9144217_9172143_9172263_9173938_9173999_9186814_9186963_9187190_9187338_9193789_9193869_9195417_9195555_9197436_9197541_9199861_9199973_9200900_9200955_9201050_9201261_9208158_9208266_9214710_9214757_9216352_9216518_9218713_9218839_9218933_9219043_9220687
ENSMUSG00000033502.16_0	chr3	-	4274	14	FSM	ENSMUSG00000033502.16	ENSMUST00000106491.7	4292	14	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAATTACTCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	116217627	116066211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116186470_116186564_116198191_116198268_116216215_116216307_116217085
ENSMUSG00000033502.16_1	chr3	-	4458	16	FSM	ENSMUSG00000033502.16	ENSMUST00000090464.7	4485	16	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAATTACTCCTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	116217664	116066211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116068358_116087374_116087736_116088399_116088523_116090779_116090828_116092085_116092199_116101788_116101949_116115730_116115870_116122127_116122359_116126443_116126532_116142102_116142166_116144854_116144922_116160275_116160356_116186470_116186564_116198191_116198268_116216215_116216307_116217085
ENSMUSG00000033510.15_0	chr7	+	2922	11	FSM	ENSMUSG00000033510.15	ENST00000678495.1	2946	11	19	5	-9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGATGCCACTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	63300546	63408607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_63300714_63335116_63335300_63346761_63346981_63377165_63377268_63378809_63378938_63379561_63379657_63383411_63383540_63385546_63385697_63404379_63404495_63404663_63404749_63407057
ENSMUSG00000033526.17_0	chr2	-	5300	27	FSM	ENSMUSG00000033526.17	ENST00000360135.8	5323	27	8	15	8	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAATAATGAGAACGAGG	NA	NA	NA	NA	NA	NA	NA	NA	121181124	121141056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121143038_121147131_121147250_121152135_121152274_121162038_121162130_121164893_121165059_121165203_121165318_121166876_121166985_121167206_121167322_121167563_121167692_121167929_121168154_121168302_121168445_121171231_121171415_121172096_121172219_121172385_121172518_121173057_121173141_121173235_121173346_121173441_121173518_121173619_121173707_121173956_121174059_121177744_121177867_121177961_121178124_121178947_121179050_121179174_121179330_121179654_121179741_121179955_121180047_121180427_121180624_121180957
ENSMUSG00000033530.9_0	chr12	-	3426	20	FSM	ENSMUSG00000033530.9	ENSMUST00000062957.8	3446	20	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGACCCCTGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	100487072	100267035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100268030_100291802_100292006_100298837_100298979_100314194_100314293_100321261_100321379_100339802_100339964_100342434_100342508_100348379_100348438_100350405_100350524_100352114_100352220_100353369_100353454_100369615_100369754_100373258_100373323_100381393_100381567_100385750_100385830_100413118_100413241_100432438_100432570_100461530_100461700_100466334_100466490_100486829
ENSMUSG00000033538.14_0	chr9	+	1411	9	FSM	ENSMUSG00000033538.14	ENSMUST00000027012.14	1435	9	7	17	7	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAAAAGAAAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	5308855	5336766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_5308915_5321257_5321513_5322819_5322918_5323624_5323799_5324723_5324959_5327175_5327320_5328432_5328543_5335995_5336100_5336534
ENSMUSG00000033538.14_1	chr9	+	1338	8	ISM	ENSMUSG00000033538.14	ENSMUST00000027012.14	1435	9	12422	18	12422	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAATAAAAAGAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	5321270	5336765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_5321513_5322819_5322918_5323624_5323799_5324723_5324959_5327175_5327320_5328432_5328543_5335995_5336100_5336534
ENSMUSG00000033540.19_10	chr5	+	1534	11	FSM	ENSMUSG00000033540.19	ENST00000247933.9	1544	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCATGAGAGCCACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	108827576	108831231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108827678_108827976_108828073_108828160_108828364_108828436_108828617_108828726_108828944_108829245_108829459_108829537_108829660_108829767_108829898_108829970_108830043_108830918_108831020_108831132
ENSMUSG00000033542.14_0	chr6	+	5446	15	FSM	ENSMUSG00000033542.14	ENSMUST00000031750.14	5469	15	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTTCTTCTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43242533	43266249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_43242678_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260266_43260826_43260989_43262292_43262364_43264473_43264579_43265547
ENSMUSG00000033542.14_1	chr6	+	5468	15	NNC	ENSMUSG00000033542.14	novel	5469	15	NA	NA	0	-5	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTTTTCTTCTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43242515	43266249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_43242678_43249238_43252360_43252873_43252932_43253470_43253533_43253737_43253992_43256376_43256538_43257094_43257248_43257531_43257662_43257884_43257960_43258356_43258447_43260107_43260270_43260826_43260989_43262292_43262364_43264473_43264579_43265547
ENSMUSG00000033543.18_0	chr9	+	879	5	FSM	ENSMUSG00000033543.18	ENSMUST00000118198.8	893	5	10	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAATATTGAATATACCA	NA	NA	NA	NA	NA	NA	NA	NA	69919841	69930144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69919944_69922573_69922693_69924100_69924206_69926670_69926798_69929718
ENSMUSG00000033543.18_5	chr9	+	228	2	FSM	ENSMUSG00000033543.18	ENST00000484743.5	248	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTAAAAGTAAGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	69922582	69926788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_69922693_69926670
ENSMUSG00000033545.15_2	chr8	+	1200	5	FSM	ENSMUSG00000033545.15	ENST00000567962.5	1228	5	10	18	10	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTCTATAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	112263444	112349687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112264197_112335924_112336021_112345837_112345944_112348227_112348320_112349533
ENSMUSG00000033554.18_0	chr3	+	1555	8	FSM	ENSMUSG00000033554.18	ENSMUST00000189799.7	1558	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATATTGTTTTATAATC	NA	NA	NA	NA	NA	NA	NA	NA	115681485	115722734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115681807_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033554.18_1	chr3	+	1813	4	FSM	ENSMUSG00000033554.18	ENSMUST00000106505.8	1836	4	2	21	2	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAAAAACAAACT	NA	NA	NA	NA	NA	NA	NA	NA	115681823	115694770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343
ENSMUSG00000033554.18_2	chr3	+	1562	8	FSM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTAGCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	115681837	115722973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_115681927_115682088_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033554.18_4	chr3	+	1474	7	ISM	ENSMUSG00000033554.18	ENSMUST00000043342.10	1576	8	256	8	256	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTAGCAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	115682087	115722973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_115682247_115686360_115686486_115693343_115693453_115708688_115708810_115718860_115718901_115720345_115720450_115722157
ENSMUSG00000033557.18_0	chr1	-	4514	9	FSM	ENSMUSG00000033557.18	ENSMUST00000122424.8	4532	9	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTATAATGTCTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	156546633	156506110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156544457_156544551_156546435
ENSMUSG00000033557.18_1	chr1	-	4391	8	FSM	ENSMUSG00000033557.18	ENSMUST00000086153.8	4414	8	16	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTCTGAAAAAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	156546640	156506147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156509213_156513760_156513821_156514925_156515118_156518046_156518219_156526296_156526407_156529968_156530056_156533237_156533738_156546435
ENSMUSG00000033565.19_0	chr15	-	6882	14	FSM	ENSMUSG00000033565.19	ENSMUST00000171751.10	6907	14	13	12	13	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAACACCACCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	77191115	76963201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77115586_77115638_77190563
ENSMUSG00000033565.19_1	chr15	-	6550	13	FSM	ENSMUSG00000033565.19	ENSMUST00000166610.8	6573	13	12	11	12	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAACACCACCCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	77038000	76963201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982285_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ENSMUSG00000033565.19_11	chr15	-	1670	13	FSM	ENSMUSG00000033565.19	ENSMUST00000228087.2	1694	13	7	17	7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	77037947	76968016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001268_77016916_77017142_77037729
ENSMUSG00000033565.19_13	chr15	-	1468	12	FSM	ENSMUSG00000033565.19	ENST00000262829.11	1482	12	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTTGAATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77037923	76968137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_77001120_77001265_77016916_77017142_77037729
ENSMUSG00000033565.19_15	chr15	-	1235	13	FSM	ENSMUSG00000033565.19	ENST00000416721.6	1243	13	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATATTTACTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77037807	76968308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916_77017142_77037729
ENSMUSG00000033565.19_16	chr15	-	1158	12	ISM	ENSMUSG00000033565.19	ENST00000416721.6	1243	13	20670	3	20614	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATATTTACTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	77017142	76968308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76968407_76969777_76969851_76970266_76970356_76978650_76978691_76982139_76982273_76983439_76983533_76983638_76983693_76987078_76987140_76989776_76989870_76997804_76997859_77001120_77001265_77016916
ENSMUSG00000033576.13_0	chr15	+	2307	5	FSM	ENSMUSG00000033576.13	ENSMUST00000149569.9	2314	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTTACTTCTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	76929475	76941299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76929541_76929864_76929959_76931230_76931332_76934806_76935606_76940051
ENSMUSG00000033576.13_1	chr15	+	2241	4	ISM	ENSMUSG00000033576.13	ENSMUST00000149569.9	2314	5	390	7	390	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCTTACTTCTTGACTA	NA	NA	NA	NA	NA	NA	NA	NA	76929865	76941299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_76929959_76931230_76931332_76934806_76935606_76940051
ENSMUSG00000033577.19_0	chr9	+	7865	33	FSM	ENSMUSG00000033577.19	ENSMUST00000035889.15	7871	33	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACATCCTTGTGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	80072312	80219005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80206427_80206532_80207816_80207949_80210554_80210582_80214241_80214461_80214953
ENSMUSG00000033577.19_1	chr9	+	7916	35	FSM	ENSMUSG00000033577.19	ENSMUST00000113268.8	7927	35	0	11	0	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAGAACATCCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80072321	80218999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_80072512_80124897_80125040_80128299_80128370_80133473_80133548_80136139_80136270_80149446_80149553_80152416_80152473_80152921_80153020_80153676_80153842_80159048_80159130_80162161_80162343_80165694_80165840_80168060_80168219_80169555_80169648_80171473_80171547_80173407_80173536_80176908_80177005_80177275_80177450_80181204_80181244_80183589_80183684_80188742_80188874_80188964_80189043_80190736_80190867_80193012_80193104_80193563_80193715_80195289_80195499_80197147_80197227_80199638_80199800_80200808_80200836_80203924_80203964_80206427_80206532_80207816_80207949_80210554_80210582_80214241_80214461_80214953
ENSMUSG00000033581.18_0	chr16	-	3882	16	FSM	ENSMUSG00000033581.18	ENSMUST00000100052.11	3899	16	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAACAAGATCTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	21982044	21877770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21894766_21894896_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033581.18_15	chr16	-	1596	14	FSM	ENSMUSG00000033581.18	ENST00000550858.1	1617	14	12	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAGTGAGGCTCCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	21981701	21879551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21879636_21880609_21880724_21882331_21882506_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033581.18_5	chr16	-	1643	15	FSM	ENSMUSG00000033581.18	ENST00000435000.2	1649	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGGCTCCCACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	21981712	21879548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21879636_21880609_21880724_21882331_21882464_21883842_21883918_21886892_21887010_21889056_21889126_21897365_21897502_21898233_21898357_21898816_21898952_21900483_21900736_21902673_21902738_21906277_21906330_21907811_21907861_21979995_21980057_21981535
ENSMUSG00000033585.6_0	chr7	+	3672	1	FSM	ENSMUSG00000033585.6	ENSMUST00000038775.6	3694	1	15	7	15	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGCATTTTCTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	61996331	62000003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_61996300_6.2e+07
ENSMUSG00000033589.5_1	chr14	+	1552	8	FSM	ENSMUSG00000033589.5	ENSMUST00000047218.5	1565	8	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTCTCTTCACATCTC	NA	NA	NA	NA	NA	NA	NA	NA	70782806	70786373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785379_70785516_70785624_70785780_70785869
ENSMUSG00000033589.5_8	chr14	+	1110	7	FSM	ENSMUSG00000033589.5	ENST00000334530.9	1128	7	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAAATAAATACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	70783076	70786337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70783179_70783916_70783990_70784369_70784447_70784554_70784676_70785106_70785221_70785624_70785780_70785869
ENSMUSG00000033590.9_0	chr9	+	5218	40	FSM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGACTGTAGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75139428	75211351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_75139458_75150043_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195489_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUSG00000033590.9_49	chr9	+	5181	39	ISM	ENSMUSG00000033590.9	ENST00000261839.12	5218	40	10623	0	10623	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGGAGACTGTAGCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	75150051	75211351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_75150155_75152251_75152418_75153419_75153565_75157014_75157172_75157654_75157799_75158722_75158805_75159805_75159914_75163112_75163220_75165240_75165507_75169489_75169572_75170266_75170408_75173349_75173476_75174306_75174391_75176802_75176938_75177550_75177649_75178824_75178912_75180126_75180239_75180790_75181003_75182752_75182919_75183183_75183331_75184213_75184379_75185506_75185601_75186617_75186682_75189117_75189299_75191174_75191269_75191428_75191493_75192214_75192296_75193692_75193874_75195330_75195489_75196340_75196510_75198130_75198219_75199435_75199535_75201207_75201363_75202443_75202534_75203291_75203443_75204685_75204969_75208087_75208263_75208685_75208767_75211211
ENSMUSG00000033594.12_0	chr8	-	2375	3	FSM	ENSMUSG00000033594.12	ENSMUST00000098327.2	2380	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCTTCTGGAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123962948	123959001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123960985_123962256_123962589_123962888
ENSMUSG00000033594.12_1	chr8	-	2311	2	FSM	ENSMUSG00000033594.12	ENSMUST00000166768.3	2707	2	382	14	358	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCAAACTGTCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	123962590	123959007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123960985_123962256
ENSMUSG00000033596.6_0	chr8	-	4443	13	FSM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	112026854	111997575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766_112024275_112026766
ENSMUSG00000033596.6_1	chr8	-	4355	12	ISM	ENSMUSG00000033596.6	ENSMUST00000038739.5	4443	13	2580	0	2580	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCAGTGTCTTCCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	112024274	111997575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111999796_112000442_112000655_112002851_112003067_112004826_112005004_112006517_112006669_112009148_112009378_112009906_112010022_112014689_112014782_112014860_112015044_112017502_112017571_112020622_112020808_112023766
ENSMUSG00000033610.17_0	chr19	-	2743	7	FSM	ENSMUSG00000033610.17	ENSMUST00000112460.3	2760	7	16	1	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTAGTGTACATGTT	NA	NA	NA	NA	NA	NA	NA	NA	34855301	34788294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_34789788_34791091_34791218_34798499_34798624_34799112_34799290_34804519_34804774_34818156_34818510_34855085
ENSMUSG00000033623.14_0	chr5	+	7689	11	FSM	ENSMUSG00000033623.14	ENSMUST00000046975.12	7708	11	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAACATATTTCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	108609105	108654831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108609318_108619937_108619978_108620242_108620384_108621654_108621773_108622975_108623073_108626168_108626225_108634005_108634114_108635701_108635791_108643699_108643838_108647492_108647574_108648222
ENSMUSG00000033623.14_9	chr5	+	456	3	FSM	ENSMUSG00000033623.14	ENST00000400151.6	475	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACATGTAAGTATGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	108609145	108621766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108609322_108620215_108620384_108621654
ENSMUSG00000033624.11_0	chr8	+	4913	18	FSM	ENSMUSG00000033624.11	ENSMUST00000039333.10	4938	18	19	6	19	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTTGTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111821291	111863700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111821459_111828445_111828723_111830535_111830670_111839133_111839216_111839318_111839483_111841373_111841496_111841755_111841874_111843313_111843464_111844598_111844792_111847779_111847905_111850376_111850533_111851110_111851245_111852236_111852386_111852847_111852961_111854874_111854970_111856237_111856328_111859508_111859692_111861239
ENSMUSG00000033628.16_1	chr18	+	3242	25	FSM	ENSMUSG00000033628.16	ENSMUST00000115812.10	3257	25	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCATATGCCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30405807	30481172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_30406072_30407321_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438096_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146_30469238_30477003_30477130_30480775
ENSMUSG00000033628.16_8	chr18	+	2444	22	FSM	ENSMUSG00000033628.16	ENST00000639914.1	2461	22	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGGTAATTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	30407329	30469230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_30407511_30410024_30410169_30415009_30415140_30421803_30421891_30423523_30423620_30426111_30426184_30426671_30426777_30427388_30427482_30431625_30431812_30435972_30436128_30436618_30436710_30438027_30438100_30444272_30444379_30445604_30445722_30449895_30450028_30452553_30452683_30453286_30453357_30455222_30455288_30456574_30456660_30457596_30457672_30466213_30466383_30469146
ENSMUSG00000033629.7_0	chr9	-	2689	11	FSM	ENSMUSG00000033629.7	ENSMUST00000036615.7	2709	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCCTAATAACTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	64928965	64894274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64912889_64913055_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033629.7_7	chr9	-	1274	10	FSM	ENSMUSG00000033629.7	ENST00000442729.6	1285	10	8	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATAACAAAGGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	64928968	64895527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_64895812_64897598_64897731_64898255_64898363_64899538_64899652_64905476_64905605_64908262_64908374_64911538_64911591_64913842_64913917_64917755_64917799_64928738
ENSMUSG00000033632.17_0	chr18	+	5240	10	FSM	ENSMUSG00000033632.17	ENSMUST00000036619.14	5257	10	10	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGACTTTCTTACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25302076	25600366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25532982_25533165_25553023_25553133_25596673
ENSMUSG00000033632.17_3	chr18	+	5343	11	FSM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	0	8	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTTCTTACAGTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	25302076	25600370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_25302144_25307743_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ENSMUSG00000033632.17_5	chr18	+	5271	10	ISM	ENSMUSG00000033632.17	ENSMUST00000097643.10	5351	11	5674	6	5674	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTTACAGTGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	25307750	25600372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_25307780_25308399_25308543_25315111_25315207_25336917_25337034_25422995_25423124_25472770_25473442_25477920_25478020_25532982_25533165_25553023_25553133_25596673
ENSMUSG00000033633.16_0	chr8	-	1370	11	FSM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCTGGACGCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	111807557	111796394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111796560_111797316_111797409_111798191_111798318_111798617_111798748_111799253_111799361_111800280_111800374_111801779_111801888_111802047_111802170_111802657_111802756_111805379_111805623_111807471
ENSMUSG00000033633.16_1	chr8	-	1418	12	FSM	ENSMUSG00000033633.16	ENST00000314151.12	1432	12	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCTGGACGCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	111808628	111796394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111796560_111797316_111797409_111798220_111798318_111798617_111798748_111799253_111799361_111800280_111800374_111801779_111801888_111802047_111802170_111802657_111802756_111805379_111805623_111807471_111807547_111808540
ENSMUSG00000033633.16_2	chr8	-	1285	10	ISM	ENSMUSG00000033633.16	ENST00000339953.9	1385	11	1942	7	1942	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGCTGGACGCTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	111805623	111796394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111796560_111797316_111797409_111798191_111798318_111798617_111798748_111799253_111799361_111800280_111800374_111801779_111801888_111802047_111802170_111802657_111802756_111805379
ENSMUSG00000033644.6_0	chr14	-	3088	22	ISM	ENSMUSG00000033644.6	ENSMUST00000048129.6	4916	23	2374	1653	12	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATAGTAGGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	70664169	70611578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70611886_70613387_70613496_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955
ENSMUSG00000033644.6_1	chr14	-	2988	21	NIC	ENSMUSG00000033644.6	novel	4916	23	NA	NA	4	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATAGTAGGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	70664177	70611578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_-_70611886_70614111_70614366_70627340_70627447_70627976_70628066_70628812_70628930_70629927_70630030_70631459_70631649_70632776_70632891_70635592_70635734_70637183_70637274_70638866_70638952_70639482_70639672_70646359_70646474_70646753_70646835_70647830_70647956_70648582_70648701_70658088_70658200_70658897_70659105_70660076_70660216_70660343_70660432_70663955
ENSMUSG00000033653.19_0	chr16	+	5012	47	FSM	ENSMUSG00000033653.19	ENSMUST00000115397.8	5032	47	15	5	15	3	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTGCCAGTCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21241882	21463425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267158_21274976_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033653.19_13	chr16	+	3870	43	FSM	ENSMUSG00000033653.19	ENST00000446204.6	3874	43	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCAAGCTGCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21254504	21463031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033653.19_2	chr16	+	4935	47	FSM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGGCCTGCCAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	21241950	21463422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21241976_21253436_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033653.19_20	chr16	+	3804	42	ISM	ENSMUSG00000033653.19	ENST00000446204.6	3874	43	6581	1	6581	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCAAGCTGCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	21261082	21463031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033653.19_9	chr16	+	4900	46	ISM	ENSMUSG00000033653.19	ENSMUST00000117598.8	4935	47	11491	5	-1060	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGCAGGCCTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	21253441	21463417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_21253814_21254502_21254572_21261083_21261215_21262838_21262933_21266004_21266038_21267098_21267154_21274978_21275104_21276128_21276216_21278490_21278559_21279871_21280026_21280127_21280188_21282344_21282453_21285163_21285245_21288866_21289038_21293997_21294073_21295223_21295260_21296235_21296327_21296594_21296642_21297143_21297234_21314629_21314677_21318937_21319161_21323147_21323238_21325519_21325572_21330268_21330312_21336032_21336106_21336862_21336983_21340633_21340706_21345126_21345247_21346285_21346343_21350029_21350113_21351032_21351118_21351812_21351912_21358768_21358859_21362017_21362065_21372824_21372973_21378083_21378174_21378947_21378991_21381879_21381984_21386718_21386804_21387138_21387222_21393716_21393798_21395374_21395545_21400282_21400449_21426917_21426972_21459428_21459510_21462870
ENSMUSG00000033658.17_0	chr8	-	6594	12	FSM	ENSMUSG00000033658.17	ENSMUST00000040241.15	6612	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTATGGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	111754385	111729826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747260_111747354_111747591_111747728_111749032_111749087_111750597_111750647_111754229
ENSMUSG00000033658.17_5	chr8	-	1461	10	FSM	ENSMUSG00000033658.17	ENST00000451014.7	1471	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAGAAATGTGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	111750646	111734710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747591_111747728_111749032_111749087_111750597
ENSMUSG00000033658.17_6	chr8	-	1405	9	ISM	ENSMUSG00000033658.17	ENST00000451014.7	1471	10	1567	10	1567	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAGAAATGTGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	111749079	111734710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747591_111747728_111749032
ENSMUSG00000033658.17_7	chr8	-	1360	8	ISM	ENSMUSG00000033658.17	ENST00000451014.7	1471	10	2917	10	2917	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAGAAATGTGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	111747729	111734710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111734944_111735281_111735474_111735812_111735976_111737352_111737591_111737916_111738095_111739385_111739501_111742196_111742300_111747591
ENSMUSG00000033671.19_0	chr1	-	13292	38	FSM	ENSMUSG00000033671.19	ENSMUST00000138762.8	13307	38	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTAATTCCATGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	155848995	155720718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155724474_155733768_155733892_155735914_155736062_155736181_155736587_155737393_155739358_155741785_155741869_155744416_155744554_155747654_155747816_155751067_155751213_155754655_155754865_155761652_155761853_155770339_155770501_155773180_155773328_155776531_155776620_155777185_155777371_155778332_155778530_155782234_155782399_155784949_155785076_155786363_155786501_155786881_155787023_155787633_155787745_155790461_155790626_155791194_155791398_155798059_155798247_155800310_155800484_155802159_155802302_155803858_155804920_155807253_155807376_155808534_155809197_155811560_155811708_155816462_155816577_155819844_155819959_155828899_155829514_155834306_155834467_155835465_155835578_155836889_155836934_155838220_155838307_155848594
ENSMUSG00000033684.15_0	chr1	-	3333	12	FSM	ENSMUSG00000033684.15	ENSMUST00000035325.15	3348	12	10	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCAGAACGTGTTTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	155688625	155653908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUSG00000033684.15_2	chr1	-	2418	13	FSM	ENSMUSG00000033684.15	ENSMUST00000194632.2	2433	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCACGCAGAACGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	155688581	155653913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155654598_155655463_155655685_155657020_155657201_155658270_155658419_155659148_155659272_155662539_155662670_155665043_155665179_155666726_155666873_155667939_155668031_155670291_155670395_155671096_155671143_155679442_155679544_155688271
ENSMUSG00000033685.14_0	chr7	+	3978	8	FSM	ENSMUSG00000033685.14	ENSMUST00000126534.8	3988	8	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCAGGGTTTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100142553	100151227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100142673_100143420_100143583_100145932_100146156_100146301_100146513_100147284_100147480_100147554_100147657_100147942_100148124_100148442
ENSMUSG00000033697.17_1	chr15	-	4488	11	FSM	ENSMUSG00000033697.17	ENSMUST00000239134.2	4494	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTCGCTGATTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76702370	76608190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76609377_76609522_76609693_76610122_76610215_76610828_76611029_76611602_76611677_76619076_76619639_76620655_76622010_76625712_76625797_76635727_76636148_76649684_76649852_76702191
ENSMUSG00000033697.17_2	chr15	-	354	2	ISM	ENSMUSG00000033697.17	ENSMUST00000177026.3	371	3	52354	3	52354	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTTCAGCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	76649842	76642247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76642444_76649684
ENSMUSG00000033697.17_3	chr15	-	534	3	FSM	ENSMUSG00000033697.17	ENSMUST00000176219.9	542	3	1	7	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGTTCAGCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	76702305	76642247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76642501_76649684_76649852_76702191
ENSMUSG00000033701.14_0	chr1	+	983	4	FSM	ENSMUSG00000033701.14	ENSMUST00000080138.13	993	4	9	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCCTTGGTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	155433874	155448033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155447943
ENSMUSG00000033701.14_1	chr1	+	5580	8	FSM	ENSMUSG00000033701.14	ENSMUST00000035560.9	5592	8	8	4	4	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGACTTTGGCCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	155433875	155567072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155434606_155440402_155440468_155443330_155443428_155477199_155477283_155491612_155491719_155500614_155500705_155552949_155552981_155562694
ENSMUSG00000033703.10_0	chr8	-	3831	24	FSM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	111629091	111609101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464_111626570_111629053
ENSMUSG00000033703.10_1	chr8	-	3784	23	ISM	ENSMUSG00000033703.10	ENSMUST00000041382.7	3838	24	2531	7	2531	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTCTTCAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	111626560	111609101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111609719_111609859_111610084_111610472_111610573_111610662_111610851_111612924_111613045_111613174_111613319_111613682_111613905_111613986_111614154_111614299_111614511_111615550_111615922_111616307_111616373_111616807_111616979_111617099_111617202_111618688_111618802_111619920_111620093_111620270_111620391_111620897_111620979_111621360_111621459_111621901_111621975_111622515_111622642_111625830_111625882_111626026_111626179_111626464
ENSMUSG00000033705.18_28	chr2	+	8692	21	ISM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	2754	7	2754	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGGAACCCCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120464655	120532483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_120464771_120495360_120495478_120496853_120496887_120496974_120497037_120498483_120498597_120501560_120501631_120504083_120504157_120508395_120508464_120509833_120509932_120510288_120510499_120510648_120510747_120513204_120513283_120514153_120514226_120515336_120515517_120518199_120518252_120518563_120518702_120519222_120519309_120519393_120519498_120523160_120523352_120523811_120524287_120526224
ENSMUSG00000033705.18_4	chr2	+	8763	22	FSM	ENSMUSG00000033705.18	ENST00000290607.12	8773	22	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGGAACCCCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	120461904	120532483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120461974_120464653_120464771_120495360_120495478_120496853_120496887_120496974_120497037_120498483_120498597_120501560_120501631_120504083_120504157_120508395_120508464_120509833_120509932_120510288_120510499_120510648_120510747_120513204_120513283_120514153_120514226_120515336_120515517_120518199_120518252_120518563_120518702_120519222_120519309_120519393_120519498_120523160_120523352_120523811_120524287_120526224
ENSMUSG00000033706.14_0	chr6	+	2478	13	FSM	ENSMUSG00000033706.14	ENSMUST00000045693.8	2486	13	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACAATGCCTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	85408978	85423417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85409083_85415089_85415199_85415731_85415872_85416638_85416758_85417087_85417158_85417621_85417727_85418541_85418605_85418719_85418791_85419092_85419200_85419580_85419638_85421224_85421320_85421899_85421971_85422050
ENSMUSG00000033712.7_0	chr14	-	3846	21	NIC	ENSMUSG00000033712.7	novel	3725	21	NA	NA	13	-16	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAGTGAAAAACAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	70390830	70375632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70390508
ENSMUSG00000033712.7_2	chr14	-	3694	21	FSM	ENSMUSG00000033712.7	ENSMUST00000035612.7	3725	21	16	15	16	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTGAAAAACAAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	70391244	70375631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70376397_70376618_70376825_70376940_70377130_70377208_70377321_70377435_70377583_70377913_70377997_70378316_70378462_70379059_70379297_70379391_70379620_70379808_70379981_70380373_70380538_70380847_70380962_70381036_70381260_70383291_70383412_70388460_70388558_70388722_70388853_70389009_70389125_70389328_70389421_70389821_70389914_70390112_70390207_70391075
ENSMUSG00000033713.13_0	chr12	-	7682	6	FSM	ENSMUSG00000033713.13	ENSMUST00000046859.12	7705	6	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAATTGAAAATAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	99360047	99156350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_99163073_99175719_99175826_99257495_99257561_99307680_99307794_99354619_99355177_99359928
ENSMUSG00000033713.13_3	chr12	-	1406	6	FSM	ENSMUSG00000033713.13	ENST00000325117.8	1435	6	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAACCGCAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	99355148	99162545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_99163073_99175719_99175826_99185856_99185923_99257495_99257561_99307680_99307794_99354619
ENSMUSG00000033715.16_0	chr13	+	3148	12	FSM	ENSMUSG00000033715.16	ENSMUST00000118717.10	3183	12	25	10	25	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATTTATTGAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	4099035	4140678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_4099133_4101206_4101370_4104686_4104824_4109540_4109716_4113553_4113722_4115324_4115442_4127969_4128048_4129053_4129177_4130618_4130729_4130989_4131156_4137234_4137318_4138947
ENSMUSG00000033720.13_0	chr6	-	3631	14	FSM	ENSMUSG00000033720.13	ENSMUST00000045846.12	3656	14	12	13	9	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAAAACACACAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85310392	85190043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85192729_85206175_85206294_85211744_85211831_85213821_85213938_85233324_85233416_85244853_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ENSMUSG00000033720.13_2	chr6	-	838	12	FSM	ENSMUSG00000033720.13	ENST00000410065.5	846	12	7	1	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGACCAGCCGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	85310409	85192651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85192729_85206175_85206294_85233324_85233416_85244853_85244920_85246079_85246137_85246891_85246946_85264031_85264058_85266158_85266214_85266743_85266771_85276521_85276600_85296503_85296573_85310289
ENSMUSG00000033720.13_7	chr6	-	603	3	FSM	ENSMUSG00000033720.13	ENSMUST00000113787.2	638	3	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCAACTTGCTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85309704	85295860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85295952_85296503_85296573_85309261
ENSMUSG00000033721.17_0	chr3	+	5011	27	FSM	ENSMUSG00000033721.17	ENSMUST00000046864.14	5019	27	3	5	3	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGAGTAATTCCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	109247971	109593009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_109248559_109331306_109331424_109402093_109402153_109404203_109404270_109408693_109408803_109410725_109410819_109413711_109413781_109416099_109416204_109418201_109418302_109423303_109423400_109426748_109426818_109428756_109428844_109433184_109433271_109434729_109434863_109435590_109435701_109470058_109470161_109470419_109470521_109481421_109481448_109485634_109485681_109535346_109535484_109554987_109555054_109559101_109559137_109564557_109564675_109565237_109565326_109571619_109571750_109590121_109590274_109590883
ENSMUSG00000033721.17_15	chr3	+	3112	10	FSM	ENSMUSG00000033721.17	ENSMUST00000106576.3	3123	10	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGCATTGAGAGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	109481226	109593003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_109481448_109485634_109485681_109535346_109535484_109554987_109555054_109559101_109559137_109564557_109564675_109565237_109565326_109571619_109571750_109590121_109590274_109590883
ENSMUSG00000033721.17_4	chr3	+	4299	28	FSM	ENSMUSG00000033721.17	ENST00000527011.5	4318	28	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTACTTGTGTCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	109248329	109592571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_109248559_109331306_109331424_109402093_109402153_109404203_109404270_109408693_109408803_109410725_109410819_109413711_109413781_109416099_109416204_109418201_109418302_109423303_109423400_109426748_109426818_109428756_109428844_109433184_109433271_109434729_109434863_109435590_109435701_109470058_109470161_109470419_109470521_109481421_109481448_109485634_109485681_109535346_109535484_109554987_109555054_109559101_109559137_109564557_109564675_109565237_109565326_109571619_109571750_109588001_109588086_109590121_109590274_109590883
ENSMUSG00000033722.10_0	chr1	-	4853	10	FSM	ENSMUSG00000033722.10	ENSMUST00000186156.7	4873	10	13	7	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAATTGCTGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	155120177	155088223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155089460_155093127_155093313_155094005_155094134_155097080_155097334_155099020_155099178_155100656_155102195_155108191_155108336_155116481_155116546_155117170_155118073_155119931
ENSMUSG00000033722.10_1	chr1	-	3780	7	FSM	ENSMUSG00000033722.10	ENSMUST00000035914.5	3797	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAATTGCTGGATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	155108474	155088223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_155089460_155093127_155093313_155094005_155094134_155097080_155097334_155099020_155099178_155100656_155102195_155108191
ENSMUSG00000033728.15_0	chr15	+	4836	4	FSM	ENSMUSG00000033728.15	ENSMUST00000127208.8	4849	4	10	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTGGTTATTCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76594847	76601896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76595128_76597066_76597421_76597600_76598186_76598279
ENSMUSG00000033728.15_2	chr15	+	2087	4	FSM	ENSMUSG00000033728.15	ENSMUST00000036423.15	2093	4	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGAATTTATGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	76594839	76599230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76595037_76597066_76597421_76597600_76598186_76598279
ENSMUSG00000033728.15_3	chr15	+	2817	4	FSM	ENSMUSG00000033728.15	ENSMUST00000137649.8	2832	4	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTACCTGCATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	76594849	76599276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76595731_76597066_76597421_76597600_76598186_76598279
ENSMUSG00000033728.15_6	chr15	+	2275	6	FSM	ENSMUSG00000033728.15	ENSMUST00000155735.2	2286	6	4	7	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCATTTCTAGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	76594934	76599284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76595037_76595163_76595284_76595621_76595731_76597066_76597421_76597600_76598186_76598279
ENSMUSG00000033730.5_0	chr14	+	3926	2	FSM	ENSMUSG00000033730.5	ENSMUST00000225200.2	3940	2	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCAGCCGGGCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	70314769	70319992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70315048_70316344
ENSMUSG00000033732.11_0	chr8	-	4515	26	FSM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTTGCCACTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	111573398	111536870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094_111571232_111573306
ENSMUSG00000033732.11_2	chr8	-	4424	25	ISM	ENSMUSG00000033732.11	ENSMUST00000042012.7	4525	26	2176	0	2176	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATTTTTGCCACTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	111571232	111536870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_111537714_111538022_111538128_111538610_111538755_111539597_111539697_111540254_111540468_111541161_111541288_111542534_111542692_111542786_111542993_111544175_111544351_111547338_111547494_111548099_111548223_111550006_111550151_111550796_111550953_111552133_111552290_111552726_111552879_111558115_111558189_111560411_111560508_111562180_111562347_111563923_111564028_111564843_111564982_111566503_111566617_111567741_111567884_111568402_111568576_111569319_111569647_111571094
ENSMUSG00000033735.10_0	chr6	-	1209	3	FSM	ENSMUSG00000033735.10	ENSMUST00000045986.8	1230	3	13	8	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCAATAGAGTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	85114735	85110667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85111271_85113804_85114096_85114420
ENSMUSG00000033735.10_1	chr6	-	1010	3	FSM	ENSMUSG00000033735.10	ENSMUST00000174769.2	1029	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGCAGATGCAATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	85114725	85110674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85111271_85113804_85113914_85114420
ENSMUSG00000033739.9_0	chr17	+	1253	2	FSM	ENSMUSG00000033739.9	ENSMUST00000036720.9	1270	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGCGAACTGTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34863747	34865291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34863928_34864218
ENSMUSG00000033751.6_0	chr8	+	2479	2	FSM	ENSMUSG00000033751.6	ENSMUST00000036734.6	2494	2	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATATATATATACTT	NA	NA	NA	NA	NA	NA	NA	NA	85558161	85562107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85559270_85560736
ENSMUSG00000033752.8_0	chr3	-	845	8	FSM	ENSMUSG00000033752.8	ENSMUST00000047368.8	875	8	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATAAGGATGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	84063075	83995251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_83995482_84000861_84000907_84012241_84012357_84023733_84023809_84041324_84041474_84045475_84045534_84049005_84049072_84062968
ENSMUSG00000033760.18_2	chr19	+	1769	4	FSM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTAATCTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	4806603	4815959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4806690_4807273_4807698_4812004_4812676_4815371
ENSMUSG00000033760.18_7	chr19	+	703	2	FSM	ENSMUSG00000033760.18	ENST00000531969.5	710	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGCTTTTCTTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4807278	4815655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4807698_4815371
ENSMUSG00000033760.18_9	chr19	+	1685	3	ISM	ENSMUSG00000033760.18	ENSMUST00000036744.8	1783	4	673	9	0	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTTAATCTTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	4807271	4815959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4807698_4812004_4812676_4815371
ENSMUSG00000033762.9_0	chr15	-	3884	22	FSM	ENSMUSG00000033762.9	ENSMUST00000036852.9	3896	22	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATGTGCTTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	76594728	76587759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588933_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451_76591545_76592324_76592424_76592526_76592635_76592734_76592862_76593001_76593752_76593967_76594109_76594300_76594399_76594477_76594512_76594592
ENSMUSG00000033762.9_5	chr15	-	2193	14	FSM	ENSMUSG00000033762.9	ENST00000621189.4	2203	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGGCCGATGACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	76591537	76587954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588929_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236_76591374_76591451
ENSMUSG00000033762.9_6	chr15	-	2103	13	ISM	ENSMUSG00000033762.9	ENST00000621189.4	2203	14	173	5	173	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAGAGGCCGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	76591374	76587959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76588066_76588153_76588263_76588442_76588597_76588675_76588857_76588929_76589104_76589186_76589317_76589390_76589644_76589793_76590057_76590145_76590288_76590358_76590539_76590616_76590806_76590882_76590967_76591236
ENSMUSG00000033763.15_0	chr8	+	4702	14	FSM	ENSMUSG00000033763.15	ENSMUST00000052457.15	4717	14	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAACGCCCCGGCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	111448116	111468026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111448423_111452825_111452888_111453006_111453081_111453744_111453830_111453935_111454028_111454108_111454184_111455359_111455518_111455801_111455910_111456654_111456753_111458689_111458811_111463777_111463853_111464203_111464381_111464561_111464728_111464921
ENSMUSG00000033767.15_0	chr3	-	5540	35	FSM	ENSMUSG00000033767.15	ENSMUST00000191758.6	5555	35	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATCCCCACTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83947473	83804967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83816458_83816642_83817675_83817816_83820570_83820696_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ENSMUSG00000033767.15_5	chr3	-	4811	34	FSM	ENSMUSG00000033767.15	ENSMUST00000052342.9	4815	34	4	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTGTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	83947478	83805515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_83805921_83806483_83806624_83807633_83807726_83808652_83808774_83812339_83812423_83813653_83813733_83817675_83817816_83820570_83820693_83826757_83826907_83829246_83829870_83830254_83830405_83831294_83831481_83833411_83833599_83834318_83834462_83835987_83836116_83837942_83838016_83839029_83839140_83840029_83840172_83842126_83842245_83843303_83843374_83844728_83844900_83845320_83845475_83845958_83846053_83847803_83847913_83848197_83848257_83849693_83849848_83850058_83850137_83867993_83868105_83868824_83868942_83869604_83869729_83875464_83875534_83938915_83938960_83946621_83946693_83947283
ENSMUSG00000033769.17_0	chr6	-	5430	22	FSM	ENSMUSG00000033769.17	ENSMUST00000160197.6	5439	22	2	7	2	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCACTGTGTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85046493	84595475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_84598494_84602106_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ENSMUSG00000033769.17_3	chr6	-	2445	22	FSM	ENSMUSG00000033769.17	ENST00000634650.1	2461	22	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGGGCCACTTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	85046378	84598349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_84598494_84602102_84602220_84723882_84723957_84768222_84768365_84812022_84812203_84820990_84821126_84825747_84825860_84828832_84828943_84830558_84830665_84831682_84831781_84832456_84832529_84835369_84835491_84837154_84837202_84837616_84837701_84867498_84867568_84885094_84885272_84966306_84966512_84980029_84980076_84980176_84980268_84981970_84982019_84988299_84988466_85046277
ENSMUSG00000033770.14_0	chr4	-	1878	17	FSM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACTGGGTCTTAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	141125352	141112589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117387_141117499_141117652_141117723_141118656_141118831_141119083_141119169_141119835_141119938_141120051_141120137_141121723_141121850_141122269_141122349_141122429_141122508_141122906_141123047_141124540_141124670_141125259
ENSMUSG00000033770.14_1	chr4	-	1787	16	ISM	ENSMUSG00000033770.14	ENST00000439316.6	1888	17	689	2	689	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTACTGGGTCTTAAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	141124671	141112589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_141112675_141114383_141114468_141114599_141114689_141115444_141115579_141116627_141116842_141117387_141117499_141117652_141117723_141118656_141118831_141119083_141119169_141119835_141119938_141120051_141120137_141121723_141121850_141122269_141122349_141122429_141122508_141122906_141123047_141124540
ENSMUSG00000033773.15_1	chr5	+	2307	13	FSM	ENSMUSG00000033773.15	ENSMUST00000112651.8	2321	13	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGCCACTTTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107745567	107809696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107745727_107746387_107746434_107749596_107749726_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ENSMUSG00000033773.15_18	chr5	+	1584	9	FSM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	5	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGCTAGCTAACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	107751401	107803155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771579_107771663_107773753_107773839_107780928_107780998_107803022
ENSMUSG00000033773.15_22	chr5	+	1492	8	ISM	ENSMUSG00000033773.15	ENST00000610020.2	1594	9	290	8	290	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCTGCTAGCTAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	107751686	107803152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771579_107771663_107773753_107773839_107780928_107780998_107803022
ENSMUSG00000033773.15_5	chr5	+	2892	12	FSM	ENSMUSG00000033773.15	ENSMUST00000112654.8	2914	12	16	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	107745598	107790782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107789648
ENSMUSG00000033773.15_6	chr5	+	2256	13	FSM	ENSMUSG00000033773.15	ENSMUST00000065422.12	2268	13	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAGCCACTTTTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	107745604	107809696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107745727_107746387_107746434_107749596_107749712_107751391_107751491_107751686_107751753_107754770_107754860_107766006_107766043_107767687_107768622_107771567_107771663_107773753_107773835_107780928_107780998_107803022_107803177_107809346
ENSMUSG00000033781.8_0	chr13	+	4440	6	FSM	ENSMUSG00000033781.8	ENSMUST00000042288.8	4453	6	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCTCCTCGAGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	3684036	3703814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_3684176_3692064_3692253_3693474_3693626_3694915_3695051_3699318_3699511_3700179
ENSMUSG00000033788.16_0	chr6	+	6785	55	FSM	ENSMUSG00000033788.16	ENSMUST00000113821.8	6803	55	15	3	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCCTGAATGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	83985586	84188039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83985985_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ENSMUSG00000033788.16_2	chr6	+	6590	55	FSM	ENSMUSG00000033788.16	ENSMUST00000203803.3	6590	55	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCTGGGGCCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83985683	84187878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83985985_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041452_84041546_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ENSMUSG00000033788.16_3	chr6	+	6619	56	FSM	ENSMUSG00000033788.16	ENSMUST00000204591.3	6641	56	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCTCTGGGGCCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83985705	84187878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83985985_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041452_84041546_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84134120_84134184_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ENSMUSG00000033788.16_4	chr6	+	6581	55	FSM	ENSMUSG00000033788.16	ENSMUST00000089595.12	6613	55	30	2	26	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCCTGAATGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	83996396	84188039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83996591_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84073458_84073501_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ENSMUSG00000033788.16_6	chr6	+	6563	54	FSM	ENSMUSG00000033788.16	ENSMUST00000113818.8	6571	54	5	3	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTCCTGAATGAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	83996372	84188039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83996591_84014215_84014272_84016487_84016580_84035400_84035507_84040302_84040418_84041857_84042070_84043925_84044055_84044435_84044499_84045034_84045086_84047154_84047186_84047860_84047977_84049614_84049742_84050843_84050948_84060697_84060767_84060895_84060940_84064773_84064857_84074689_84074806_84075134_84075249_84076397_84076576_84077135_84077261_84078844_84078952_84083791_84083985_84085028_84085185_84088837_84088970_84089048_84089216_84090266_84090382_84090580_84090687_84090957_84091101_84093029_84093204_84106452_84106547_84107097_84107176_84114199_84114382_84116992_84117134_84117638_84117669_84118904_84118935_84126656_84126759_84126855_84127018_84128865_84129032_84129314_84129392_84156653_84156753_84162939_84163069_84163334_84163491_84165186_84165279_84166665_84166837_84167736_84167880_84169877_84170018_84171300_84171390_84171646_84171743_84172159_84172302_84176729_84176830_84180164_84180344_84182765_84182876_84184074_84184223_84187774
ENSMUSG00000033790.12_0	chr7	+	3899	23	FSM	ENSMUSG00000033790.12	ENSMUST00000032627.5	3905	23	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATTTCGGTTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	55443904	55481422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55444089_55445645_55445700_55445786_55445896_55448579_55448677_55449210_55449291_55450376_55450513_55454328_55454444_55455042_55455133_55455800_55455895_55456330_55456578_55458258_55458462_55463180_55463297_55464607_55464877_55466205_55466405_55466986_55467176_55468461_55468645_55471526_55471612_55471725_55471847_55473267_55473447_55475327_55475454_55475980_55476070_55479078_55479180_55480589
ENSMUSG00000033792.13_0	chrX	+	4892	23	FSM	ENSMUSG00000033792.13	ENSMUST00000113557.8	4900	23	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTGACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105070881	105168515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131943_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ENSMUSG00000033792.13_4	chrX	+	4849	23	FSM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	0	17	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTGACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105070927	105168515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_105070986_105113375_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ENSMUSG00000033792.13_6	chrX	+	4796	22	ISM	ENSMUSG00000033792.13	ENSMUST00000055941.7	4866	23	42447	13	42447	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GACCAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105113374	105168519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_105113514_105128719_105129210_105129694_105130421_105131940_105132124_105135689_105135854_105138458_105138621_105140382_105140460_105140995_105141222_105142391_105142626_105144132_105144225_105145465_105145594_105145952_105146108_105146317_105146453_105148752_105148948_105150789_105150973_105153366_105153584_105158695_105158843_105161857_105162001_105163840_105164045_105165195_105165314_105166948_105167052_105167944
ENSMUSG00000033793.13_0	chr1	+	2033	14	FSM	ENSMUSG00000033793.13	ENSMUST00000044369.13	2049	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTCCCAGGTGATGAT	NA	NA	NA	NA	NA	NA	NA	NA	5153311	5232745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5171292_5171347_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUSG00000033793.13_6	chr1	+	1776	13	FSM	ENSMUSG00000033793.13	ENSMUST00000192698.3	1811	13	30	5	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAATATAATTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	5153406	5232637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_5153502_5154639_5154787_5159231_5159335_5163585_5163676_5165837_5165952_5168251_5168357_5187612_5187711_5194499_5194693_5203306_5203486_5206034_5206161_5213972_5214075_5220170_5220285_5232327
ENSMUSG00000033799.11_0	chr13	-	8313	20	FSM	ENSMUSG00000033799.11	ENSMUST00000096069.5	8338	20	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGTCATTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	3661091	3616042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_3616668_3616917_3617033_3617435_3617618_3618751_3618858_3619487_3619642_3620311_3620438_3623486_3627201_3631751_3632194_3634499_3635374_3638297_3638535_3639940_3640649_3644130_3644194_3644292_3644366_3645496_3645601_3646776_3646878_3649651_3649752_3649836_3649857_3649938_3650063_3650191_3650335_3660789
ENSMUSG00000033808.17_0	chr2	-	2846	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090042.12	2874	20	12	16	12	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTAACAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	120234538	120185808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204391_120204461_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000033808.17_1	chr2	-	2865	20	FSM	ENSMUSG00000033808.17	ENSMUST00000090046.12	2897	20	16	16	-4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTTTAACAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	120234554	120185808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120187020_120190014_120190046_120190519_120190576_120193359_120193422_120193842_120193917_120199724_120199829_120200923_120200983_120202004_120202114_120204968_120205041_120205899_120205994_120208373_120208474_120210071_120210256_120211247_120211310_120216254_120216373_120222661_120222707_120222795_120222850_120224842_120224957_120227842_120227929_120233190_120233252_120234385
ENSMUSG00000033809.16_1	chr16	-	1432	9	FSM	ENSMUSG00000033809.16	ENSMUST00000045918.15	1451	9	7	12	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATACATAAAGTTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	20429511	20424212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20424468_20424611_20424757_20425275_20425353_20425509_20425716_20426513_20426635_20427235_20427397_20427491_20427640_20427736_20427837_20429292
ENSMUSG00000033813.16_0	chr1	+	2532	10	FSM	ENSMUSG00000033813.16	ENSMUST00000081551.14	2547	10	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACATGTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4928048	4968125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_4928200_4937692_4937756_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156_4965229_4966578
ENSMUSG00000033813.16_36	chr1	+	852	8	FSM	ENSMUSG00000033813.16	ENST00000640041.1	864	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATGGCACACCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4928115	4965225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_4928200_4948249_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156
ENSMUSG00000033813.16_63	chr1	+	769	7	ISM	ENSMUSG00000033813.16	ENST00000640041.1	864	8	20137	8	19988	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTATGGCACACCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4948248	4965225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_4948356_4956966_4957055_4959679_4959826_4960962_4961020_4962137_4962293_4963639_4963787_4965156
ENSMUSG00000033819.17_0	chr15	+	2678	11	FSM	ENSMUSG00000033819.17	ENSMUST00000037551.15	2692	11	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGCCTTCCCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	76555823	76579114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76555963_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ENSMUSG00000033819.17_2	chr15	+	2805	12	FSM	ENSMUSG00000033819.17	ENSMUST00000135388.3	2827	12	17	5	17	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGAGCCTTCCCATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	76555863	76579114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76555963_76573527_76573695_76574371_76575353_76575896_76575968_76576054_76576201_76577036_76577141_76577213_76577339_76577426_76577553_76577638_76577715_76577794_76577925_76578067_76578231_76578497
ENSMUSG00000033826.11_0	chr17	+	13735	91	FSM	ENSMUSG00000033826.11	ENST00000327475.11	13751	91	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGAGAGCCACACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30854924	31094126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_30855051_30862229_30862315_30863530_30863683_30867389_30867580_30868597_30868762_30872206_30872384_30875550_30875665_30875859_30875968_30876942_30877045_30880959_30881107_30882271_30882470_30887247_30887325_30889585_30889686_30891213_30891334_30892753_30892890_30896060_30896249_30902604_30902686_30903104_30903222_30905356_30905477_30909154_30909284_30912922_30913036_30914083_30914191_30919363_30919437_30920818_30921006_30923628_30923826_30925358_30925486_30927264_30927501_30929475_30929581_30931246_30931361_30932007_30932071_30934453_30934555_30936737_30936876_30937800_30938042_30939972_30940173_30941872_30942027_30944055_30944220_30945759_30945863_30947136_30947242_30948054_30948217_30949987_30950213_30955002_30955176_30956224_30956404_30958541_30958730_30960100_30960188_30960281_30960390_30961629_30961765_30963487_30963650_30965731_30965979_30966120_30966363_30966820_30966962_30967481_30967720_30970420_30970564_30971020_30971156_30971795_30971919_30973947_30974162_30975676_30975787_30977218_30977383_30978543_30978737_30979979_30980103_30981614_30981746_30984569_30984724_30986772_30986938_30988616_30988844_30990770_30990890_30992502_30992607_30993919_30994097_30997980_30998149_30998696_30998913_31001357_31001496_31003036_31003165_31003980_31004153_31006118_31006275_31009800_31009957_31013606_31013790_31019457_31019564_31022036_31022290_31022966_31023158_31026178_31026301_31029233_31029353_31032001_31032205_31034605_31034680_31037033_31037187_31038092_31038249_31049746_31049864_31052529_31052632_31059526_31059688_31070601_31070759_31073774_31073928_31074878_31075069_31090285_31090408_31093815
ENSMUSG00000033845.14_0	chr1	-	1870	5	FSM	ENSMUSG00000033845.14	ENSMUST00000130201.8	1894	5	13	11	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTAATAACCTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	4855920	4843439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4844740_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033845.14_1	chr1	-	4184	5	FSM	ENSMUSG00000033845.14	ENSMUST00000156816.7	4203	5	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCTAATAACCTTAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	4855949	4843439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4847025_4847747_4847872_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033845.14_5	chr1	-	1564	4	FSM	ENSMUSG00000033845.14	ENSMUST00000146665.3	1569	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATATAAGAGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4855957	4851443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_4852525_4852790_4852957_4854173_4854329_4855795
ENSMUSG00000033852.17_0	chr2	+	1356	8	FSM	ENSMUSG00000098789.8	ENSMUST00000044675.5	1373	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTGATACACTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	119857972	119863067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119858058_119860538_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119862321_119862482_119862594
ENSMUSG00000033852.17_3	chr2	+	2727	20	FSM	ENSMUSG00000033852.17	ENST00000342159.6	2749	20	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCGCAAACAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	119860561	119872066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871875
ENSMUSG00000033852.17_9	chr2	+	2918	21	FSM	ENSMUSG00000033852.17	ENST00000382448.8	2936	21	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCGCAAACAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	119860557	119872066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119860693_119860769_119861024_119861296_119861354_119861787_119861884_119862055_119862133_119865078_119865152_119865400_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ENSMUSG00000033855.16_0	chr17	+	2977	4	FSM	ENSMUSG00000033855.16	ENSMUST00000163588.8	2983	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTCTCCCCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	88933988	88953152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88934291_88942548_88944511_88951765_88951969_88952642
ENSMUSG00000033857.13_0	chr11	+	4035	14	FSM	ENSMUSG00000033857.13	ENSMUST00000135383.9	4064	14	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGAAAAATGAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	118367672	118380024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118367931_118369708_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377273_118377380_118377647_118377763_118377916
ENSMUSG00000033857.13_2	chr11	+	2059	13	FSM	ENSMUSG00000033857.13	ENST00000579016.6	2060	13	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGGTCCCTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	118369719	118378314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_118369780_118369911_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
ENSMUSG00000033857.13_7	chr11	+	1995	12	ISM	ENSMUSG00000033857.13	ENST00000579016.6	2060	13	197	0	197	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCGGTCCCTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	118369915	118378314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_118370114_118372101_118372251_118372699_118372858_118373357_118373507_118373707_118373874_118375243_118375348_118375665_118375775_118375949_118376141_118376582_118376732_118377270_118377380_118377647_118377763_118377916
ENSMUSG00000033860.14_0	chr3	+	1093	6	FSM	ENSMUSG00000033860.14	ENST00000405164.5	1104	6	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACGTGCATTGCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	82917378	82922320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_82917502_82917738_82917897_82918651_82918837_82920070_82920349_82921444_82921615_82922141
ENSMUSG00000033862.8_1	chr8	+	1634	13	FSM	ENSMUSG00000033862.8	ENSMUST00000036880.8	1642	13	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123951588	123958989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123951708_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUSG00000033862.8_4	chr8	+	1580	13	FSM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123951604	123958989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123951670_123953085_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUSG00000033862.8_5	chr8	+	1510	12	ISM	ENSMUSG00000033862.8	ENSMUST00000213005.2	1580	13	1486	0	1486	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACAGTTTGGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	123953090	123958989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_123953159_123953684_123953757_123954161_123954265_123954398_123954481_123955067_123955136_123955586_123955640_123955850_123955921_123957006_123957067_123957332_123957457_123957530_123957671_123958098_123958152_123958372
ENSMUSG00000033863.3_0	chr19	+	4470	2	FSM	ENSMUSG00000033863.3	ENSMUST00000036884.3	4486	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTCCAGCCATTACG	NA	NA	NA	NA	NA	NA	NA	NA	23118597	23145490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_23119624_23142046
ENSMUSG00000033871.15_0	chr18	-	3607	12	FSM	ENSMUSG00000033871.15	ENSMUST00000075299.13	3656	12	28	21	-3	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAACAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	61533474	61431227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61431855_61432656_61432812_61435689_61435812_61437778_61437855_61440277_61441086_61442103_61442166_61442716_61442754_61443477_61444580_61445224_61445342_61448807_61449021_61456205_61456380_61533360
ENSMUSG00000033880.12_0	chr11	-	2321	6	FSM	ENSMUSG00000033880.12	ENSMUST00000043722.10	2330	6	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGTTTGTTCATCCATA	NA	NA	NA	NA	NA	NA	NA	NA	118292910	118283577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118284949_118287416_118287670_118288946_118289079_118289205_118289398_118290553_118290628_118292611
ENSMUSG00000033880.12_2	chr11	-	1394	3	FSM	ENSMUSG00000033880.12	ENST00000591778.5	1406	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCCACTGACATGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	118289383	118283864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118284949_118288946_118289079_118289205
ENSMUSG00000033883.12_0	chr3	+	6666	4	FSM	ENSMUSG00000033883.12	ENSMUST00000197653.5	6689	4	11	12	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAGATATACTAC	NA	NA	NA	NA	NA	NA	NA	NA	36205176	36224479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36205345_36213670_36213798_36216780_36216877_36218204
ENSMUSG00000033885.16_0	chr14	-	2797	18	FSM	ENSMUSG00000033885.16	ENSMUST00000036682.9	2812	18	6	9	4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAAGTATGTTGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	14371556	14304664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14305839_14314427_14314488_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUSG00000033885.16_15	chr14	-	1784	17	FSM	ENSMUSG00000033885.16	ENST00000302779.9	1794	17	10	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTAACGCTGAGCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	14371555	14305611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14305827_14317615_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14349901_14349953_14371356
ENSMUSG00000033885.16_41	chr14	-	1644	17	FSM	ENSMUSG00000033885.16	ENST00000383715.8	1659	17	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGACAATGCATTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	14371534	14309683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_14309775_14314427_14314491_14317622_14317693_14318191_14318279_14318768_14318847_14321644_14321694_14323500_14323580_14325061_14325180_14325535_14325698_14328228_14328331_14329026_14329132_14331708_14331784_14332353_14332428_14332826_14332905_14338982_14339170_14347380_14347429_14371356
ENSMUSG00000033900.14_0	chr3	+	6200	14	FSM	ENSMUSG00000033900.14	ENSMUST00000091014.10	6218	14	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCACAGTTTGGTAACTG	NA	NA	NA	NA	NA	NA	NA	NA	82265388	82302567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_82265563_82266281_82266432_82267196_82267282_82270597_82270922_82278485_82278710_82281414_82281509_82284229_82284475_82286243_82286315_82287384_82287554_82289200_82289291_82290514_82290677_82290822_82290969_82291151_82291285_82298434
ENSMUSG00000033902.13_0	chr2	+	6936	30	FSM	ENSMUSG00000033902.13	ENSMUST00000066058.8	6942	30	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATTCTGAGAAGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	119803179	119857883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119803650_119828962_119829055_119841223_119841287_119841482_119841541_119842413_119842585_119843073_119843212_119843392_119843576_119844099_119844261_119845103_119845294_119845823_119845971_119846173_119846350_119847260_119847353_119847620_119847747_119848061_119848133_119848236_119848359_119848779_119848856_119848968_119849081_119849402_119849467_119849706_119849842_119850032_119850170_119850358_119850415_119851564_119851802_119852211_119852379_119852570_119852717_119852817_119853013_119853176_119853262_119853512_119853797_119854023_119854621_119854998_119855085_119855584
ENSMUSG00000033902.13_2	chr2	+	161	2	ISM	ENSMUSG00000033902.13	ENST00000627631.1	210	3	17	228	17	-228	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGCCTGGCCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	119803552	119841287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_119803650_119841223
ENSMUSG00000033902.13_3	chr2	+	199	3	FSM	ENSMUSG00000033902.13	ENST00000627631.1	210	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAGTACTTGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	119803545	119841514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119803650_119841223_119841287_119841482
ENSMUSG00000033902.13_5	chr2	+	97	2	ISM	ENSMUSG00000033902.13	ENST00000627631.1	210	3	37686	1	37686	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAGTACTTGGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	119841221	119841514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_119841287_119841482
ENSMUSG00000033904.17_0	chr7	+	5057	16	FSM	ENSMUSG00000033904.17	ENSMUST00000106557.8	5073	16	8	8	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAAATCTTGTTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	118311782	118336239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_118311972_118313328_118313472_118314582_118314738_118317189_118317319_118320616_118322262_118323677_118323809_118324525_118324683_118325225_118325366_118325722_118325840_118328845_118328948_118329180_118329298_118329890_118329965_118330919_118330983_118331616_118331677_118332109_118332196_118334490
ENSMUSG00000033906.6_0	chrX	-	5479	12	FSM	ENSMUSG00000033906.6	ENSMUST00000042070.6	5509	12	21	9	21	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACATAAATTTGTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	103714649	103580583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_103584775_103588433_103588511_103604290_103604395_103607426_103607554_103609307_103609441_103615259_103615381_103616110_103616144_103617774_103617845_103631906_103632028_103641697_103641793_103676189_103676217_103714269
ENSMUSG00000033909.18_0	chr11	-	5641	21	FSM	ENSMUSG00000033909.18	ENSMUST00000106296.9	5655	21	11	3	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACCTTTCTGTGTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	118181046	118150479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118152374_118152804_118152957_118153214_118153331_118153860_118153963_118154468_118154669_118155523_118156067_118158627_118158759_118159369_118160039_118162957_118163097_118163776_118163878_118164341_118164483_118165793_118165906_118166964_118167048_118167585_118167657_118168093_118168162_118170030_118170134_118170641_118170753_118175684_118175907_118176563_118176826_118178492_118178650_118180782
ENSMUSG00000033916.6_0	chr7	-	908	6	FSM	ENSMUSG00000033916.6	ENSMUST00000210587.2	930	6	13	9	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATTTACCAAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	12768565	12765945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768428
ENSMUSG00000033916.6_12	chr7	-	803	6	FSM	ENSMUSG00000033916.6	ENST00000312547.7	817	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAAACACCCCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	12768676	12766006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767948_12768561
ENSMUSG00000033916.6_2	chr7	-	930	6	FSM	ENSMUSG00000033916.6	ENSMUST00000005711.6	949	6	12	7	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAATTTACCAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	12768722	12765947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12766130_12766215_12766278_12766361_12766493_12766568_12766749_12767755_12767970_12768561
ENSMUSG00000033917.16_0	chr7	-	1563	6	FSM	ENSMUSG00000033917.16	ENSMUST00000038791.15	1582	6	9	10	9	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCAAACTGTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	118304992	118287777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118288374_118290805_118291018_118293715_118293809_118294258_118294365_118297777_118297954_118304612
ENSMUSG00000033918.17_0	chr16	-	1337	10	FSM	ENSMUSG00000033918.17	ENSMUST00000048642.15	1348	10	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTGTTCGTTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	20121129	20098572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20098836_20101472_20101571_20101673_20101776_20104514_20104586_20105669_20105820_20106606_20106703_20112103_20112153_20116342_20116484_20116880_20117077_20120958
ENSMUSG00000033931.10_0	chr8	-	3332	10	ISM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	160	12	159	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTAAAGATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	127697661	127673933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487
ENSMUSG00000033931.10_1	chr8	-	3416	11	FSM	ENSMUSG00000033931.10	ENSMUST00000045994.8	3424	11	5	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGCTTAGTGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	127697816	127673924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_127676294_127677449_127677569_127678051_127678092_127679913_127679978_127680115_127680200_127686291_127686336_127688661_127688722_127692131_127692373_127696732_127696879_127697487_127697660_127697739
ENSMUSG00000033933.14_0	chr6	+	2773	3	FSM	ENSMUSG00000033933.14	ENSMUST00000035673.8	2792	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGGAAGCTACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113600927	113608583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113601340_113605052_113605176_113606345
ENSMUSG00000033938.6_0	chr8	+	610	3	FSM	ENSMUSG00000033938.6	ENSMUST00000036996.6	623	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCATCTGTGCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	84293309	84298252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84293560_84297458_84297628_84298061
ENSMUSG00000033940.9_1	chr6	+	1074	3	FSM	ENSMUSG00000033940.9	ENSMUST00000035725.7	1095	3	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCAGACCTGATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	113581745	113593904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113581858_113592736_113592820_113593025
ENSMUSG00000033943.16_0	chr2	+	11922	25	FSM	ENSMUSG00000033943.16	ENST00000219905.12	11942	25	9	11	1	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGCAGAATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119727709	119798217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172_119795895_119796057
ENSMUSG00000033943.16_15	chr2	+	11968	25	FSM	ENSMUSG00000033943.16	ENSMUST00000046717.13	11982	25	1	13	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGCAGAATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	119727709	119798217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119727828_119733086_119734215_119746911_119747855_119750106_119750186_119750292_119750389_119751846_119751979_119752218_119752324_119753908_119754568_119756859_119757203_119762191_119762416_119762984_119763168_119763553_119763624_119765629_119766148_119769119_119769268_119771702_119772327_119776652_119776729_119776845_119776944_119777305_119778775_119781566_119781695_119783355_119783408_119788637_119788845_119790820_119790933_119791206_119791441_119792274_119792452_119794172
ENSMUSG00000033952.15_0	chr1	+	6058	27	FSM	ENSMUSG00000033952.15	ENSMUST00000200083.5	6072	27	8	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTCACTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	139382517	139421820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUSG00000033952.15_26	chr1	+	8556	27	FSM	ENSMUSG00000033952.15	ENST00000680265.1	8568	27	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAATGTAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	139384481	139421593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408238_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUSG00000033952.15_7	chr1	+	9858	28	FSM	ENSMUSG00000033952.15	ENSMUST00000053364.12	9867	28	0	9	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTCACTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	139382512	139421820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_139382943_139384477_139384622_139384774_139386183_139389163_139389269_139389509_139389657_139390793_139391040_139391973_139392042_139395655_139395798_139396355_139396487_139397073_139397250_139398175_139398322_139398409_139398496_139399308_139399531_139401275_139401484_139401575_139401719_139401982_139402112_139404445_139404641_139405083_139408879_139410075_139410243_139413437_139413526_139414944_139415155_139416125_139416276_139417383_139417576_139417701_139417895_139418036_139418192_139419255_139419433_139420444_139420615_139421385
ENSMUSG00000033953.11_0	chr11	+	2841	6	FSM	ENSMUSG00000033953.11	ENSMUST00000102880.5	2859	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTGAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	17109273	17150368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17109543_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033953.11_1	chr11	+	2594	6	FSM	ENSMUSG00000033953.11	ENST00000234310.8	2601	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTGAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	17109314	17150368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17109337_17132106_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033953.11_5	chr11	+	2572	5	ISM	ENSMUSG00000033953.11	ENST00000234310.8	2601	6	22792	7	22792	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTGAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	17132106	17150368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_17132147_17142956_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033953.11_6	chr11	+	2527	4	ISM	ENSMUSG00000033953.11	ENST00000234310.8	2601	6	33647	7	33647	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGGCTTGAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	17142961	17150368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_17143134_17144216_17144277_17144668_17144854_17148258
ENSMUSG00000033955.14_0	chr2	+	5740	12	FSM	ENSMUSG00000033955.14	ENSMUST00000111605.9	5747	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGATTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84880810	84903392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84880905_84881204_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ENSMUSG00000033955.14_3	chr2	+	5646	11	ISM	ENSMUSG00000033955.14	ENSMUST00000111605.9	5747	12	401	0	401	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGATTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84881204	84903392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_84881318_84882268_84882900_84884626_84884697_84888469_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ENSMUSG00000033955.14_4	chr2	+	4781	8	FSM	ENSMUSG00000033955.14	ENSMUST00000048400.4	4799	8	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGATTGTGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84888520	84903392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84889832_84892231_84894361_84900331_84900702_84900950_84901102_84901216_84901354_84902049_84902208_84902439_84902513_84902940
ENSMUSG00000033960.7_0	chr18	+	6753	4	FSM	ENSMUSG00000033960.7	ENSMUST00000037029.7	6782	4	25	4	25	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACCTCTTTGGTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4634902	4682865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_4635032_4649074_4649406_4672514_4676168_4680225
ENSMUSG00000033961.17_0	chr7	+	4587	6	FSM	ENSMUSG00000033961.17	ENSMUST00000045810.15	4615	6	5	23	5	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAAAGTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	12711779	12719618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12712040_12712924_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ENSMUSG00000033961.17_1	chr7	+	3695	5	FSM	ENSMUSG00000033961.17	ENSMUST00000108536.3	3705	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAGTAAAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	12712164	12718226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12713306_12713377_12713574_12713811_12713907_12715772_12715855_12716045
ENSMUSG00000033964.13_0	chr1	+	8355	11	FSM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAGCACACCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	139350119	139380737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_139350162_139350771_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ENSMUSG00000033964.13_3	chr1	+	8309	10	ISM	ENSMUSG00000033964.13	ENSMUST00000039867.10	8361	11	656	6	656	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAGCACACCCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	139350775	139380737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_139352006_139356863_139357072_139358018_139358089_139359666_139359815_139365178_139365309_139366695_139366792_139368082_139368190_139369500_139369607_139370546_139370636_139374612
ENSMUSG00000033967.5_0	chr7	+	3232	2	FSM	ENSMUSG00000033967.5	ENSMUST00000045870.5	3239	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGTATTTATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	12661342	12664992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12661394_12661811
ENSMUSG00000033967.5_1	chr7	+	3174	1	FSM	ENSMUSG00000065006.3	ENSMUST00000083072.3	107	1	-2891	-176	-2891	176	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTTTAATTATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	12661809	12664983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12661800_12665000
ENSMUSG00000033970.16_0	chr5	-	1306	9	FSM	ENSMUSG00000033970.16	ENSMUST00000038131.10	1317	9	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTATGAGTATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	151574700	151566224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_151566569_151567175_151567246_151568077_151568177_151568254_151568392_151568982_151569165_151570903_151571002_151571709_151571778_151573336_151573475_151574530
ENSMUSG00000033972.10_0	chr17	-	2765	6	FSM	ENSMUSG00000033972.10	ENSMUST00000115535.3	2784	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACAAGTTGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	22580371	22556978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22559089_22559947_22560075_22562620_22562675_22577803_22577970_22578420_22578506_22580148
ENSMUSG00000033981.15_0	chr3	-	3375	16	FSM	ENSMUSG00000033981.15	ENST00000645636.1	3391	16	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGACCTGTTTTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80710025	80595521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_80596022_80596523_80596659_80598626_80598742_80599591_80599840_80609764_80609964_80614194_80614566_80615005_80615213_80616684_80616796_80617596_80617702_80617983_80618152_80629338_80629501_80634138_80634193_80639344_80639542_80648265_80648506_80708951_80709093_80709603
ENSMUSG00000033983.15_0	chr11	+	3109	11	FSM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAACTCAATGTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	88861077	88882428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88861099_88861243_88861306_88863446_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUSG00000033983.15_2	chr11	+	3082	10	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	172	11	172	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAACTCAATGTCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	88861249	88882428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_88861306_88863446_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUSG00000033983.15_3	chr11	+	3030	9	ISM	ENSMUSG00000033983.15	ENSMUST00000107898.8	3120	11	2368	8	-1315	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATGTCCACTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	88863445	88882431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_88863680_88864257_88864384_88864689_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUSG00000033983.15_4	chr11	+	2586	7	FSM	ENSMUSG00000033983.15	ENSMUST00000036649.8	2607	7	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAAACTCAATGTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	88864768	88882426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88865029_88871894_88872994_88873114_88873202_88873428_88873477_88875842_88875913_88878804_88878894_88881493
ENSMUSG00000033985.18_0	chr4	+	3007	11	FSM	ENSMUSG00000033985.18	ENSMUST00000045542.13	3033	11	16	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGACTTATTTTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116578160	116661429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116578454_116598812_116599116_116608301_116608424_116628996_116629046_116649284_116649432_116657729_116657813_116658356_116658442_116658645_116658730_116658916_116659004_116659420_116659539_116659793
ENSMUSG00000033991.10_1	chr13	+	5368	44	FSM	ENSMUSG00000033991.10	ENSMUST00000091466.4	5381	44	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTCCCCTCCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	76246857	76336094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718
ENSMUSG00000033991.10_4	chr13	+	6955	45	FSM	ENSMUSG00000033991.10	ENSMUST00000224386.2	6976	45	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACATGGGAACCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	76246861	76338423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_76246949_76247489_76247560_76252823_76252888_76254348_76254498_76256311_76256403_76259791_76259936_76260293_76260386_76261156_76261233_76261688_76261830_76266202_76266302_76266396_76266506_76270753_76270895_76271560_76271663_76272879_76273020_76275084_76275172_76275615_76275720_76276742_76276870_76277478_76277659_76278319_76278445_76279326_76279581_76280976_76281080_76282793_76282971_76283065_76283211_76283345_76283425_76283519_76283582_76284536_76284594_76286452_76286522_76287606_76287682_76288646_76288789_76291301_76291396_76293319_76293398_76295830_76295956_76296861_76296986_76298636_76298856_76300028_76300102_76303540_76303595_76303770_76303883_76305367_76305497_76321437_76321560_76323307_76323467_76328162_76328316_76330933_76331065_76333245_76333370_76335718_76335814_76336551
ENSMUSG00000034006.18_0	chr18	+	2000	5	FSM	ENSMUSG00000034006.18	ENSMUST00000123750.8	2004	5	3	1	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGTGTAAGTAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	80298462	80335939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80298626_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_1	chr18	+	1853	5	FSM	ENSMUSG00000034006.18	ENSMUST00000129043.8	1864	5	0	11	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTGAACATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80299498	80335920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80299534_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_2	chr18	+	1976	6	FSM	ENSMUSG00000034006.18	ENSMUST00000091798.10	1989	6	6	7	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTCATGTGGTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	80299526	80335932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ENSMUSG00000034006.18_3	chr18	+	2342	5	FSM	ENSMUSG00000034006.18	ENSMUST00000140594.8	2356	5	5	9	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTGAACATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80299526	80335920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80300334_80306634_80306769_80315676_80315731_80326490_80326708_80334790
ENSMUSG00000034006.18_5	chr18	+	1904	5	FSM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTGAACATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80299532	80335920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80299619_80299996_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034006.18_6	chr18	+	1804	4	ISM	ENSMUSG00000034006.18	ENSMUST00000070135.8	1911	5	478	7	478	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAACTGAACATGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	80300010	80335920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_80300334_80306634_80306769_80326490_80326708_80334790
ENSMUSG00000034007.11_0	chr9	-	5220	33	FSM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	0	11	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAGCCATGCCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55845385	55457173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ENSMUSG00000034007.11_1	chr9	-	5190	32	ISM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	16766	6	-1730	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATGCCAAGCACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	55828619	55457168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549
ENSMUSG00000034007.11_10	chr9	-	4311	32	ISM	ENSMUSG00000034007.11	ENSMUST00000217647.2	4370	33	16771	19	-1734	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55828623	55458069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771669_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549
ENSMUSG00000034007.11_2	chr9	-	5127	31	ISM	ENSMUSG00000034007.11	ENSMUST00000214747.2	5231	33	18512	1	16	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAAGCACTGCGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	55826873	55457163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771687_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807
ENSMUSG00000034007.11_9	chr9	-	4351	33	FSM	ENSMUSG00000034007.11	ENSMUST00000217647.2	4370	33	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	55845394	55458069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_55458156_55460754_55460807_55463368_55463561_55487490_55487641_55493502_55493738_55510049_55510206_55517125_55517359_55563188_55563313_55593163_55593280_55650826_55650954_55665276_55665343_55669511_55669649_55714296_55714405_55714889_55715043_55716385_55716468_55722644_55722788_55723937_55724094_55745403_55745545_55765364_55765477_55765691_55765810_55766282_55766359_55767031_55767203_55771669_55771889_55781928_55782189_55791130_55791289_55799455_55799573_55802565_55802667_55819323_55819519_55822183_55822255_55823270_55823389_55826807_55826872_55828549_55828623_55845353
ENSMUSG00000034009.15_0	chr3	-	2203	17	FSM	ENSMUSG00000034009.15	ENST00000460056.6	2221	17	13	5	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTTAGTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	79612994	79552024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106_79594206_79612881
ENSMUSG00000034009.15_1	chr3	-	2357	18	FSM	ENSMUSG00000034009.15	ENST00000307765.10	2374	18	12	5	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGATCTTAGTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	79645181	79552024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79594106_79594206_79612881_79613020_79645052
ENSMUSG00000034009.15_12	chr3	-	2104	16	FSM	ENSMUSG00000034009.15	ENST00000470033.2	2115	16	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGTAACTGGATCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	79613000	79552030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79552325_79555379_79555599_79557720_79558132_79559474_79559705_79562910_79562985_79564718_79564791_79567377_79567450_79568574_79568647_79570603_79570676_79573735_79573811_79574929_79575002_79575088_79575161_79578153_79578226_79585982_79586055_79589747_79589854_79612881
ENSMUSG00000034021.16_3	chr5	+	7401	35	FSM	ENSMUSG00000034021.16	ENSMUST00000016569.11	7417	35	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAATATATATTTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	150597213	150734149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720136_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ENSMUSG00000034021.16_6	chr5	+	6559	35	FSM	ENSMUSG00000034021.16	ENSMUST00000202170.4	6598	35	34	5	34	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTTATAAAACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	150597237	150733325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724586_150724695_150729038_150729178_150731277
ENSMUSG00000034021.16_8	chr5	+	7306	35	FSM	ENSMUSG00000034021.16	ENSMUST00000038900.15	7315	35	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAATTATATTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	150597296	150734128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150597419_150639867_150639995_150643287_150643492_150645759_150645847_150645942_150646041_150646709_150646837_150652358_150652440_150659743_150659885_150662665_150662782_150667628_150667724_150670070_150670217_150671560_150671713_150673298_150673413_150677852_150677935_150679846_150679896_150682136_150682277_150684483_150684600_150688365_150688472_150693251_150693413_150698859_150698984_150701617_150701777_150702675_150702745_150704073_150704211_150706483_150706608_150711779_150711985_150713969_150714085_150715578_150715712_150716031_150716152_150717013_150717077_150717732_150717879_150720035_150720142_150724042_150724483_150724583_150724695_150729038_150729178_150731277
ENSMUSG00000034022.9_0	chr15	-	4506	37	FSM	ENSMUSG00000034022.9	ENSMUST00000071898.7	4518	37	9	3	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGAGTGTGTGGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	76491782	76480008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76480133_76480208_76480348_76480419_76480550_76480615_76480772_76480850_76480899_76480976_76481044_76481116_76481294_76481388_76481542_76481630_76481773_76481845_76481931_76482009_76482101_76482175_76482293_76483002_76483156_76483233_76483378_76483467_76483558_76483655_76483863_76483939_76484115_76484189_76484327_76484412_76484592_76484667_76484810_76484881_76484993_76485137_76485228_76485305_76485387_76485462_76485538_76485603_76485699_76485773_76485826_76485926_76486050_76486121_76486210_76486327_76486422_76486520_76486632_76486708_76486849_76486990_76487138_76487233_76487386_76487501_76487583_76487711_76487846_76487923_76487952_76491534
ENSMUSG00000034023.17_0	chr6	+	5512	44	FSM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113508642	113573978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113508710_113510734_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ENSMUSG00000034023.17_3	chr6	+	5432	43	ISM	ENSMUSG00000034023.17	ENSMUST00000036340.12	5512	44	2105	0	2083	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTGTTGGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	113510747	113573978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_113510833_113512729_113512865_113513674_113513743_113513884_113513989_113514567_113514629_113516221_113516275_113519167_113519247_113521970_113522096_113523553_113523642_113525302_113525408_113525810_113525912_113526261_113526371_113526553_113526590_113528720_113528865_113530640_113530776_113532095_113532228_113533223_113533335_113537046_113537157_113538666_113538728_113539333_113539454_113540053_113540128_113540405_113540550_113541254_113541356_113542117_113542234_113543770_113543880_113545168_113545280_113545564_113545678_113547833_113547978_113549604_113549722_113551047_113551177_113551534_113551654_113554325_113554437_113555321_113555453_113558344_113558439_113560372_113560496_113561809_113561904_113562432_113562505_113563170_113563210_113564342_113564418_113565305_113565381_113568119_113568267_113570190_113570293_113572848
ENSMUSG00000034024.9_0	chr10	-	1945	16	FSM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	116899710	116886910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880_116898956_116899610
ENSMUSG00000034024.9_27	chr10	-	1648	14	FSM	ENSMUSG00000034024.9	ENST00000544368.6	1657	14	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACAAGTTCATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	116898952	116886962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116887182_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034024.9_4	chr10	-	1846	15	ISM	ENSMUSG00000034024.9	ENSMUST00000047672.9	1959	16	763	5	0	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTTAATGTCTTACTGA	NA	NA	NA	NA	NA	NA	NA	NA	116898956	116886910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_116887182_116888920_116889063_116889944_116890045_116890781_116890886_116891011_116891141_116891944_116892065_116893078_116893183_116893695_116893824_116894002_116894104_116896552_116896756_116897202_116897316_116897409_116897487_116897929_116898042_116898721_116898788_116898880
ENSMUSG00000034032.16_0	chr2	-	4734	25	FSM	ENSMUSG00000034032.16	ENSMUST00000048493.12	4744	25	6	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCTGGACTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	119618012	119594444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607146_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617895
ENSMUSG00000034032.16_2	chr2	-	4182	24	ISM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	3551	8	3548	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTGCCCACAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119614437	119594822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607189_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214
ENSMUSG00000034032.16_3	chr2	-	4229	25	FSM	ENSMUSG00000034032.16	ENST00000304330.9	4237	25	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTGCCCACAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	119617988	119594822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119594926_119595024_119595085_119595219_119595397_119597972_119598730_119599730_119599874_119600060_119600214_119600367_119600564_119600800_119600911_119601370_119601573_119601676_119601836_119602219_119602378_119602968_119603140_119603618_119603754_119603870_119604054_119604271_119604440_119604598_119604701_119605433_119605533_119605776_119605893_119607189_119607375_119608597_119608820_119610536_119610658_119613126_119613217_119613563_119613713_119614214_119614452_119617955
ENSMUSG00000034042.17_0	chr4	+	3571	12	FSM	ENSMUSG00000034042.17	ENSMUST00000030460.15	3588	12	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATAAACTACATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116414860	116451068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116415026_116426360_116427379_116428067_116428181_116430590_116430721_116431533_116431812_116436443_116436517_116438446_116438641_116444567_116444709_116445775_116445941_116447362_116447488_116448425_116448529_116450002
ENSMUSG00000034055.17_0	chrX	-	6083	33	FSM	ENSMUSG00000034055.17	ENSMUST00000122022.8	6115	33	21	11	21	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGACTATGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	101687831	101557591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575527_101575567_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ENSMUSG00000034055.17_1	chrX	-	6080	33	FSM	ENSMUSG00000034055.17	ENSMUST00000052012.14	6115	33	25	10	25	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGACTATGTCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	101687827	101557590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101559822_101560382_101560584_101561048_101561103_101564359_101564531_101571672_101571724_101575682_101575722_101576008_101576125_101580789_101580892_101584717_101584848_101584977_101585057_101588279_101588360_101588913_101589071_101598489_101598630_101599131_101599224_101600701_101600879_101603170_101603341_101612895_101612975_101617073_101617219_101618570_101618681_101629682_101629818_101636232_101636312_101641007_101641116_101641791_101641888_101652647_101652771_101653757_101653812_101659516_101659664_101660922_101661022_101664943_101665025_101669193_101669277_101680148_101680318_101682686_101682735_101685826_101685986_101687452
ENSMUSG00000034057.9_0	chr10	-	3106	25	FSM	ENSMUSG00000034057.9	ENST00000547771.6	3115	25	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCTGAAAACACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	116732755	116612392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116612720_116612853_116612929_116613248_116613361_116615453_116615529_116617853_116617942_116619078_116619139_116631344_116631528_116631626_116631680_116631964_116632007_116634488_116634575_116638600_116638665_116639303_116639471_116652695_116652806_116653588_116653698_116658587_116658789_116664861_116664953_116667362_116667474_116668796_116668874_116670353_116670550_116675239_116675391_116684180_116684273_116684929_116685174_116685271_116685340_116697385_116697477_116732522
ENSMUSG00000034059.15_0	chr2	+	1570	5	FSM	ENSMUSG00000034059.15	ENSMUST00000238573.2	1585	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGAGGTGGTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84564408	84568991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84564638_84567073_84567310_84567407_84567452_84567763_84567873_84568039
ENSMUSG00000034059.15_1	chr2	+	1668	5	FSM	ENSMUSG00000034059.15	ENSMUST00000090729.9	1676	5	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGAGGTGGTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84564401	84568991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84564638_84566982_84567310_84567407_84567452_84567763_84567873_84568039
ENSMUSG00000034064.15_0	chr16	-	2735	11	FSM	ENSMUSG00000034064.15	ENSMUST00000036210.7	2758	11	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACCATTGGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	38370605	38345506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38347144_38347938_38347996_38349806_38349975_38352145_38352205_38355086_38355187_38358268_38358329_38363199_38363322_38366110_38366247_38368799_38368944_38369704_38369796_38370444
ENSMUSG00000034066.14_0	chr1	+	3910	27	FSM	ENSMUSG00000034066.14	ENSMUST00000120301.8	3937	27	17	10	-16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCAGAATACTCAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93439817	93549688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93439907_93456290_93456502_93487957_93488063_93488865_93488909_93491030_93491110_93495138_93495237_93496802_93496918_93497594_93497743_93502092_93502189_93504091_93504256_93504544_93504614_93505369_93505428_93507461_93507721_93527644_93527824_93531099_93531190_93531931_93532066_93533063_93533146_93535154_93535393_93537697_93537829_93540113_93540183_93540839_93540930_93545273_93545357_93546224_93546344_93546614_93546773_93547875_93547984_93548214_93548367_93548945
ENSMUSG00000034071.16_1	chr7	-	688	2	NNC	ENSMUSG00000034071.16	novel	878	2	NA	NA	9	6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGAAAAACCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	12152576	12149490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_12150072_12152469
ENSMUSG00000034071.16_8	chr7	-	864	2	FSM	ENSMUSG00000034071.16	ENST00000404801.2	878	2	3	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACCAGAGAAGCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	12152587	12149507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12150254_12152469
ENSMUSG00000034075.11_0	chr2	-	4678	12	FSM	ENSMUSG00000034075.11	ENSMUST00000035840.6	4706	12	26	2	26	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTTGCTATTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	84545498	84518315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84540661_84541817_84545326
ENSMUSG00000034075.11_1	chr2	-	2772	11	FSM	ENSMUSG00000034075.11	ENST00000527985.5	2789	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACGGATTCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	84545733	84519301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84519789_84520193_84521054_84521469_84521583_84522229_84522354_84522676_84522810_84523692_84523785_84524658_84524762_84524913_84525087_84526586_84526745_84532676_84532799_84545326
ENSMUSG00000034083.17_0	chr6	+	1727	11	FSM	ENSMUSG00000034083.17	ENSMUST00000037783.7	1752	11	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGAGAAATACTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91855047	91876813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91870386_91870482_91872194_91872328_91875127_91875281_91876272
ENSMUSG00000034083.17_2	chr6	+	1184	9	FSM	ENSMUSG00000034083.17	ENST00000303688.8	1190	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGTTGTATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91855121	91876578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91855168_91857237_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876272
ENSMUSG00000034083.17_9	chr6	+	1131	8	ISM	ENSMUSG00000034083.17	ENST00000303688.8	1190	9	2123	6	2123	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGGTTGTATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	91857244	91876578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_91857343_91858227_91858329_91862328_91862388_91865050_91865232_91867774_91867871_91869836_91869980_91875133_91875281_91876272
ENSMUSG00000034088.16_0	chr1	-	6218	28	FSM	ENSMUSG00000034088.16	ENSMUST00000170883.8	6231	28	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACCAGATGCAGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	93406520	93333671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93406434
ENSMUSG00000034088.16_1	chr1	-	6123	27	ISM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	3434	-1801	-1460	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAACCCAAAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	93369974	93333682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907
ENSMUSG00000034088.16_10	chr1	-	4403	28	FSM	ENSMUSG00000034088.16	ENSMUST00000042498.14	4427	28	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAGCCAAAACGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	93373397	93335496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93335982_93336090_93336220_93336410_93336528_93336672_93336859_93340084_93340229_93341212_93341348_93341548_93341654_93342533_93342689_93344222_93344362_93344893_93345113_93345189_93345412_93347790_93348010_93348805_93348938_93349064_93349152_93350985_93351100_93351491_93351597_93352988_93353129_93355279_93355359_93355869_93355975_93357099_93357208_93357819_93358027_93358676_93358893_93359033_93359241_93364815_93365032_93365947_93366106_93368401_93368515_93369907_93369973_93373301
ENSMUSG00000034098.15_0	chr3	+	2918	15	FSM	ENSMUSG00000034098.15	ENST00000427802.2	2938	15	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTAAGGAGCCCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	75981885	76615476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_75982282_76052255_76052398_76131150_76131182_76229360_76229610_76317744_76317942_76337048_76337170_76389531_76389699_76443550_76443672_76496253_76496416_76500749_76500885_76536219_76536339_76555582_76555733_76566965_76567074_76569064_76569190_76614781
ENSMUSG00000034101.15_1	chr2	-	6091	20	FSM	ENSMUSG00000034101.15	ENSMUST00000067232.10	6119	20	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATTATAAAATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	84481003	84430427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ENSMUSG00000034101.15_14	chr2	-	5982	20	FSM	ENSMUSG00000034101.15	ENSMUST00000111684.8	6021	20	32	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATAGTGACATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84481057	84430450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433531_84433619_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454794_84480749
ENSMUSG00000034101.15_17	chr2	-	5271	18	FSM	ENSMUSG00000034101.15	ENSMUST00000111697.9	5294	18	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGAGGTCTGTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	84481061	84431124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUSG00000034101.15_2	chr2	-	5833	17	FSM	ENSMUSG00000034101.15	ENSMUST00000111698.8	5850	17	7	10	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATAAAATTACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84481082	84430424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480664
ENSMUSG00000034101.15_20	chr2	-	5013	17	FSM	ENSMUSG00000034101.15	ENSMUST00000066177.10	5044	17	23	8	23	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTGTGTGGGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	84480831	84431134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUSG00000034101.15_22	chr2	-	5357	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111691.2	5380	19	17	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGTGTGTGGGAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84481092	84431132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84442875_84442894_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84480749
ENSMUSG00000034101.15_4	chr2	-	6125	19	FSM	ENSMUSG00000034101.15	ENSMUST00000111692.8	6170	19	34	11	29	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATTATAAAATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	84481055	84430427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480749
ENSMUSG00000034101.15_5	chr2	-	5902	18	FSM	ENSMUSG00000034101.15	ENSMUST00000111690.8	5945	18	30	13	25	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATTATAAAATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	84481059	84430427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454794_84480749
ENSMUSG00000034101.15_6	chr2	-	5738	17	FSM	ENSMUSG00000034101.15	ENSMUST00000111677.8	5789	17	38	13	-31	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATATTATAAAATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	84481051	84430427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433531_84433619_84433992_84434097_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ENSMUSG00000034101.15_7	chr2	-	5810	18	FSM	ENSMUSG00000034101.15	ENSMUST00000111676.8	5852	18	32	10	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATAAAATTACTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	84481057	84430424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433531_84433619_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84480749
ENSMUSG00000034105.10_0	chr8	-	3007	7	ISM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	4991	6	4991	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTTCATTGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120500164	120486820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010
ENSMUSG00000034105.10_1	chr8	-	3079	8	FSM	ENSMUSG00000034105.10	ENSMUST00000049156.7	3085	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTTCATTGGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	120505155	120486820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120488570_120489030_120489211_120490674_120490794_120494804_120495234_120497979_120498125_120499112_120499344_120500010_120500180_120505098
ENSMUSG00000034108.7_0	chr19	-	1054	8	FSM	ENSMUSG00000034108.7	ENSMUST00000037246.7	1067	8	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCATTCTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4889355	4875401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884200_4884339_4888858_4888932_4889224
ENSMUSG00000034108.7_1	chr19	-	976	8	FSM	ENSMUSG00000034108.7	ENSMUST00000236451.2	984	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGCATTCTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	4889298	4875401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4875693_4875797_4875902_4875971_4876050_4882860_4882922_4883368_4883547_4884221_4884339_4888858_4888932_4889224
ENSMUSG00000034109.16_0	chr3	-	5512	15	FSM	ENSMUSG00000034109.16	ENSMUST00000038563.14	5546	15	16	18	16	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAACCTAATAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	75864220	75782408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ENSMUSG00000034109.16_1	chr3	-	4527	16	FSM	ENSMUSG00000034109.16	ENSMUST00000117242.8	4551	16	13	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCACAAACCATTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75864243	75783500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_75785485_75785952_75786025_75793581_75793651_75793979_75794148_75797828_75797939_75799195_75799279_75800089_75800344_75802141_75802445_75805277_75805440_75809707_75809792_75810553_75810637_75813705_75813857_75815436_75815491_75817315_75817366_75818881_75818957_75863418
ENSMUSG00000034110.9_0	chr5	+	4265	4	FSM	ENSMUSG00000034110.9	ENSMUST00000040616.9	4291	4	22	4	22	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCCCTCAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	130173723	130184643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130174068_130176894_130177065_130180511_130180691_130181071
ENSMUSG00000034110.9_1	chr5	+	1727	4	FSM	ENSMUSG00000034110.9	ENST00000275532.8	1741	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGGTGCTCTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	130173877	130182299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130174068_130176894_130177065_130180511_130180651_130181071
ENSMUSG00000034111.7_0	chr12	-	7400	6	FSM	ENSMUSG00000034111.7	ENSMUST00000037418.7	7409	6	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAAAATATTTGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87247227	87213018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87219406_87220821_87221128_87221314_87221442_87223407_87223538_87228162_87228245_87246859
ENSMUSG00000034112.10_0	chr8	+	2454	23	FSM	ENSMUSG00000034112.10	ENST00000262429.9	2459	23	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120447956	120482853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120448030_120451757_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034112.10_14	chr8	+	2381	22	ISM	ENSMUSG00000034112.10	ENST00000262429.9	2459	23	3806	0	3806	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGAGTGATGGGAGCCGA	NA	NA	NA	NA	NA	NA	NA	NA	120451757	120482853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_120451848_120453040_120453127_120456908_120457018_120461026_120461177_120461248_120461318_120461965_120462042_120465132_120465200_120469068_120469194_120469331_120469430_120471056_120471159_120472252_120472343_120474352_120474455_120474893_120475051_120475762_120475934_120476511_120476610_120476699_120476751_120477898_120478066_120479526_120479596_120479682_120479800_120480940_120481089_120482276_120482376_120482713
ENSMUSG00000034116.18_0	chr17	+	2217	23	FSM	ENSMUSG00000034116.18	ENST00000304076.6	2227	23	10	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGGCCATCTGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	57602989	57631803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034116.18_2	chr17	+	2280	24	FSM	ENSMUSG00000034116.18	ENST00000539284.2	2291	24	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATGGCCATCTGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	57602992	57631803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57603099_57603551_57603611_57603699_57603769_57604048_57604158_57604245_57604342_57605771_57605841_57606100_57606205_57606841_57606942_57608180_57608277_57608860_57608930_57609073_57609161_57609264_57609351_57610014_57610148_57610833_57610944_57611823_57611926_57612279_57612402_57612662_57612709_57613106_57613244_57614033_57614100_57616451_57616484_57618783_57618901_57622243_57622332_57625627_57625743_57631641
ENSMUSG00000034118.16_0	chr5	+	1842	6	FSM	ENSMUSG00000034118.16	ENSMUST00000118993.8	1867	6	15	10	15	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAGCACTCAATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	130102181	130164560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130102276_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUSG00000034118.16_1	chr5	+	2035	6	FSM	ENSMUSG00000034118.16	ENSMUST00000040721.9	2050	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACTCAATGGTCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	130108220	130164565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130108503_130130430_130131377_130143308_130143508_130158348_130158400_130163299_130163340_130164048
ENSMUSG00000034118.16_3	chr5	+	1700	5	FSM	ENSMUSG00000034118.16	ENST00000649664.1	1719	5	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAAGCTTAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	130130468	130164545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130131377_130143308_130143508_130158348_130158400_130163299_130163345_130164048
ENSMUSG00000034120.19_0	chr11	-	1887	3	FSM	ENSMUSG00000034120.19	ENSMUST00000092404.13	1899	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTGTCCTGGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116743912	116740730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116741788_116742846_116743158_116743393
ENSMUSG00000034120.19_1	chr11	-	1306	5	FSM	ENSMUSG00000034120.19	ENSMUST00000190993.7	1326	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTTTTAAAAAAAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	116743885	116740886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116741180_116741681_116741788_116742473_116742578_116742846_116743158_116743393
ENSMUSG00000034120.19_7	chr11	-	1222	3	FSM	ENSMUSG00000034120.19	ENST00000508921.7	1235	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATTTTTGTGCACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	116743751	116741198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116741788_116742846_116743158_116743429
ENSMUSG00000034121.13_0	chr11	+	2475	18	FSM	ENSMUSG00000034121.13	ENSMUST00000038196.7	2499	18	19	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTCTGTGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	87744059	87754624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753393_87753477_87753566_87753665_87753762
ENSMUSG00000034121.13_6	chr11	+	1706	17	FSM	ENSMUSG00000034121.13	ENST00000678463.1	1714	17	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAACTGGATGATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	87744061	87753940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87752810_87752945_87753566_87753665_87753762
ENSMUSG00000034121.13_7	chr11	+	1571	16	FSM	ENSMUSG00000034121.13	ENST00000313863.11	1580	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCAAACTGGATGATCTAG	NA	NA	NA	NA	NA	NA	NA	NA	87744062	87753940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87744156_87744562_87744673_87745803_87745875_87746297_87746454_87747388_87747487_87747633_87747763_87748012_87748118_87748686_87748805_87749428_87749486_87750440_87750484_87750902_87750969_87751539_87751611_87751935_87752006_87752094_87752203_87753566_87753665_87753762
ENSMUSG00000034126.6_0	chr12	-	5045	21	FSM	ENSMUSG00000034126.6	ENSMUST00000037788.6	5064	21	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTACATTGTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87194664	87153641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87156068_87156777_87156893_87157075_87157217_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ENSMUSG00000034126.6_5	chr12	-	2463	21	FSM	ENSMUSG00000034126.6	ENST00000682247.1	2477	21	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTCCTGGACTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	87194271	87155819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87156068_87156777_87156893_87157075_87157206_87158110_87158217_87158297_87158358_87158652_87158725_87163304_87163382_87164158_87164251_87164712_87164865_87166345_87166425_87169615_87169686_87171585_87171653_87174075_87174186_87175726_87175810_87177062_87177170_87178445_87178606_87180133_87180243_87182268_87182378_87184776_87184882_87186417_87186503_87193944
ENSMUSG00000034127.16_0	chr10	+	1127	9	FSM	ENSMUSG00000034127.16	ENSMUST00000080630.11	1156	9	24	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTTTTGCTGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	115653199	115685520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_115653292_115653397_115653566_115663725_115663789_115669089_115669228_115670996_115671072_115671180_115671289_115675779_115675906_115679956_115680041_115685247
ENSMUSG00000034127.16_1	chr10	+	1381	9	FSM	ENSMUSG00000034127.16	ENSMUST00000179196.3	1381	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACGTCTGTGTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	115653187	115685798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_115653256_115653397_115653566_115663725_115663789_115669089_115669228_115670996_115671072_115671180_115671289_115675779_115675906_115679956_115680041_115685247
ENSMUSG00000034127.16_2	chr10	+	1230	8	FSM	ENSMUSG00000034127.16	ENSMUST00000035563.15	1244	8	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTTTTGCTGTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	115653202	115685520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_115653566_115663725_115663789_115669089_115669228_115670996_115671072_115671180_115671289_115675779_115675906_115679956_115680041_115685247
ENSMUSG00000034135.16_0	chr9	+	6273	25	FSM	ENSMUSG00000034135.16	ENSMUST00000126865.8	6287	25	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTGATATGTTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	45924123	46135484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45924429_46034514_46034632_46038307_46038372_46066676_46066839_46089169_46089295_46089729_46089854_46105460_46105580_46106117_46106229_46106463_46106608_46107090_46107169_46107281_46107392_46109444_46109599_46109849_46110006_46113297_46113369_46115503_46115648_46119219_46119371_46120015_46120142_46120361_46120448_46120852_46120963_46121773_46122114_46122967_46123861_46130723_46130888_46131507_46131641_46132364_46132533_46133366
ENSMUSG00000034152.7_0	chr13	-	4916	13	FSM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATCCTGGGTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	74356828	74317612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025_74355217_74356776
ENSMUSG00000034152.7_1	chr13	-	4858	12	ISM	ENSMUSG00000034152.7	ENSMUST00000035934.7	4922	13	1618	6	1618	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATCCTGGGTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	74355210	74317612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_74320364_74321414_74321543_74322105_74322268_74328553_74328677_74330162_74330314_74330395_74330507_74332791_74332893_74337279_74337406_74338188_74338307_74340726_74341409_74347574_74347795_74355025
ENSMUSG00000034154.16_0	chr2	-	6341	36	FSM	ENSMUSG00000034154.16	ENSMUST00000049920.14	6354	36	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAATCAAAGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	119308162	119203529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119205063_119207827_119208044_119210043_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119237296_119237425_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
ENSMUSG00000034154.16_2	chr2	-	4263	34	FSM	ENSMUSG00000034154.16	ENST00000616814.4	4280	34	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGTAACCATGGTAACCAT	NA	NA	NA	NA	NA	NA	NA	NA	119308009	119204851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119204909_119210148_119210204_119210446_119210603_119212390_119212480_119213344_119213448_119213830_119213990_119223333_119223407_119232810_119232906_119242882_119243109_119248801_119248943_119254085_119254258_119255739_119255834_119256185_119256254_119257069_119257204_119257380_119257549_119258957_119259044_119261468_119261587_119262408_119262494_119263671_119263815_119264629_119264690_119269855_119269952_119272093_119272175_119272863_119273074_119274927_119274996_119275941_119276138_119277336_119277541_119278685_119278740_119280483_119280699_119281810_119281932_119284536_119284699_119286865_119286934_119287052_119287223_119288561_119288748_119307859
ENSMUSG00000034156.17_0	chr11	+	7536	31	FSM	ENSMUSG00000034156.17	ENST00000343736.9	7549	31	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAATTGATGCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	87651373	87676744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87652555_87653262_87653371_87653606_87653736_87654285_87654466_87655023_87655210_87656453_87656532_87656618_87656703_87656938_87657029_87657191_87657315_87657542_87657648_87659255_87659307_87660487_87660709_87661236_87661410_87662484_87662601_87662882_87662993_87665349_87666181_87666327_87666480_87666798_87667165_87667250_87667491_87667872_87668062_87668592_87669433_87670054_87670155_87670250_87670403_87671028_87671198_87671707_87671780_87672286_87672420_87672507_87672580_87672770_87672876_87673485_87673537_87675561_87676168_87676221
ENSMUSG00000034157.13_0	chr12	+	4079	4	FSM	ENSMUSG00000034157.13	ENSMUST00000187814.7	4098	4	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATTTGGTCTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	86994130	87012131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_86994274_86999517_86999706_87007045_87007216_87008553
ENSMUSG00000034158.10_0	chr16	+	8589	4	FSM	ENSMUSG00000034158.10	ENSMUST00000078717.7	8604	4	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTCTTGGTCCGGTC	NA	NA	NA	NA	NA	NA	NA	NA	37688763	37709218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37689343_37697410_37697540_37698648_37698927_37701615
ENSMUSG00000034159.13_0	chr1	-	2294	6	FSM	ENSMUSG00000034159.13	ENSMUST00000043718.12	2299	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCAGGTTGCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	93088665	93079070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_93079823_93080638_93080996_93082208_93082363_93083700_93083927_93087322_93088073_93088610
ENSMUSG00000034159.13_1	chr1	-	2239	5	ISM	ENSMUSG00000034159.13	ENSMUST00000043718.12	2299	6	598	0	520	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCCAGGTTGCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	93088072	93079070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_93079823_93080638_93080996_93082208_93082363_93083700_93083927_93087322
ENSMUSG00000034160.14_0	chrX	+	5377	22	FSM	ENSMUSG00000034160.14	ENSMUST00000044475.5	5384	22	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGGCTTGGTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	100683674	100727955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100683929_100686581_100686763_100687552_100687797_100695745_100695815_100699229_100699347_100704857_100704938_100706964_100707161_100707448_100707590_100708249_100708351_100710883_100711038_100711121_100711224_100711585_100711766_100713362_100713522_100713636_100713727_100716053_100716180_100716648_100716820_100716928_100717046_100717147_100717319_100719754_100719908_100722314_100722568_100722829_100722954_100725761
ENSMUSG00000034161.9_0	chr15	+	1011	2	FSM	ENSMUSG00000034161.9	ENSMUST00000043089.9	1035	2	6	18	6	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATTAAAAATGAAACAGT	NA	NA	NA	NA	NA	NA	NA	NA	76341725	76343631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76342387_76343281
ENSMUSG00000034163.11_0	chr10	+	6941	35	FSM	ENSMUSG00000034163.11	ENSMUST00000036044.9	6957	35	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTAAAGAACAGTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	115220866	115268664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_115221713_115226554_115226972_115233909_115233975_115236619_115236819_115237513_115237738_115239104_115239226_115240104_115240203_115242257_115242468_115242638_115242804_115243779_115243918_115244775_115244898_115244997_115245148_115246433_115246609_115247103_115247236_115247624_115248168_115248261_115248372_115249866_115249999_115250100_115250223_115251143_115251246_115251524_115251645_115252643_115252828_115254546_115254734_115255676_115255866_115256546_115256785_115259109_115259216_115259288_115259488_115260462_115260558_115262940_115263052_115263302_115263408_115263529_115263696_115264765_115264867_115266557_115266660_115267307_115267348_115267607_115267671_115267800
ENSMUSG00000034165.17_0	chr17	+	2102	7	FSM	ENSMUSG00000034165.17	ENSMUST00000171031.8	2113	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47815986	47910608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47816192_47889633_47889699_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_1	chr17	+	2059	7	FSM	ENSMUSG00000034165.17	ENSMUST00000183044.8	2064	7	5	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47816048	47910608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47816192_47889633_47889718_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_2	chr17	+	1987	7	FSM	ENSMUSG00000034165.17	ENSMUST00000037333.17	1999	7	4	8	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47816056	47910608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47816192_47889633_47889699_47904578_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_3	chr17	+	2039	7	FSM	ENSMUSG00000034165.17	ENSMUST00000183177.8	2060	7	15	6	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47816088	47910608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47816212_47889633_47889718_47904533_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034165.17_4	chr17	+	1961	5	FSM	ENSMUSG00000034165.17	ENSMUST00000182209.8	1977	5	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGTGGCTCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	47904404	47910608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47904778_47905658_47905875_47908344_47908505_47908927_47909065_47909533
ENSMUSG00000034168.8_0	chr12	-	4082	1	FSM	ENSMUSG00000034168.8	ENSMUST00000038422.8	4098	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	778	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTAATTCTGCCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	86931563	86927481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_86927500_86931600
ENSMUSG00000034173.14_0	chr5	+	2458	4	FSM	ENSMUSG00000034173.14	ENSMUST00000041466.14	2492	4	19	15	19	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCACAAAGAAACCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129924582	129932449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129924694_129928023_129928274_129929185_129929337_129930503
ENSMUSG00000034175.14_0	chr11	+	2316	9	FSM	ENSMUSG00000034175.14	ENSMUST00000101610.10	2333	9	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5048942	5056091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUSG00000034175.14_1	chr11	+	1790	9	FSM	ENSMUSG00000034175.14	ENSMUST00000036320.12	1790	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5049438	5056091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5049567_5049747_5049899_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055180_5055314_5055432_5055718_5055799
ENSMUSG00000034175.14_2	chr11	+	1611	8	FSM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5050156	5056091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5050227_5050396_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUSG00000034175.14_3	chr11	+	1522	7	ISM	ENSMUSG00000034175.14	ENSMUST00000109878.9	1611	8	259	0	259	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGGTCTCCTGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	5050415	5056091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_5050588_5051868_5051906_5053160_5053350_5054020_5054405_5055184_5055348_5055432_5055718_5055799
ENSMUSG00000034177.16_14	chr11	+	4765	10	FSM	ENSMUSG00000034177.16	ENST00000584437.5	4787	10	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATAAATATGATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	87553554	87626351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87555694_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852_87623212_87624981_87625330_87626132
ENSMUSG00000034177.16_25	chr11	+	2197	8	FSM	ENSMUSG00000034177.16	ENST00000581868.1	2208	8	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCCGAGGGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87553976	87623277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87554049_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_36	chr11	+	2127	7	ISM	ENSMUSG00000034177.16	ENSMUST00000040089.5	3670	9	18479	3088	18479	-9	internal_fragment	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGCCGAGGGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87609201	87623277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852
ENSMUSG00000034177.16_4	chr11	+	3752	11	FSM	ENSMUSG00000034177.16	ENST00000407977.7	3773	11	12	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATAAATATGATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	87553552	87626351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87554049_87555063_87555694_87609203_87609327_87617975_87618051_87618161_87618294_87618851_87618957_87620225_87620388_87620957_87621061_87621852_87623212_87624981_87625330_87626132
ENSMUSG00000034187.19_0	chr11	-	3753	21	FSM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTTGAAATATTGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	103844879	103712617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555_103821642_103844795
ENSMUSG00000034187.19_1	chr11	-	3666	20	ISM	ENSMUSG00000034187.19	ENSMUST00000103075.11	3766	21	23240	14	23240	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATACTTGAAATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	103821642	103712621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_103714086_103714564_103714621_103718036_103718151_103719257_103719393_103737199_103737280_103738819_103738887_103749720_103749855_103752718_103752876_103754064_103754161_103762984_103763173_103763416_103763492_103763970_103764137_103773567_103773768_103801268_103801425_103804141_103804218_103804626_103804735_103807331_103807499_103816973_103817014_103819569_103819670_103821555
ENSMUSG00000034189.6_0	chr8	-	3137	5	FSM	ENSMUSG00000034189.6	ENSMUST00000036049.6	3141	5	4	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	120301918	120288727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504_120294731_120301830
ENSMUSG00000034189.6_1	chr8	-	3055	4	ISM	ENSMUSG00000034189.6	ENSMUST00000212517.2	2215	5	1998	-811	1998	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCCGCCACCAGAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	120294736	120288727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_120290877_120292382_120292611_120292767_120293214_120294504
ENSMUSG00000034190.10_0	chr14	-	2621	10	FSM	ENSMUSG00000034190.10	ENSMUST00000036381.10	2649	10	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAAAACACCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	69969972	69954465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69955750_69955963_69956147_69956577_69956639_69956847_69956947_69957196_69957317_69957560_69957610_69958376_69958511_69958655_69958842_69967571_69967744_69969639
ENSMUSG00000034192.6_0	chr6	+	723	4	FSM	ENSMUSG00000034192.6	ENSMUST00000040607.6	743	4	16	4	16	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTTTTTTTTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	91492925	91499603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91493061_91494029_91494141_91496530_91496627_91499222
ENSMUSG00000034192.6_1	chr6	+	579	3	ISM	ENSMUSG00000034192.6	ENSMUST00000206947.2	618	4	1008	0	1008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTTTTTTTTTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	91494037	91499602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_91494141_91496530_91496627_91499222
ENSMUSG00000034194.19_0	chr14	-	1723	8	FSM	ENSMUSG00000034194.19	ENSMUST00000118374.8	1726	8	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTGCGTCCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	69945030	69934755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502_69944631_69944954
ENSMUSG00000034194.19_1	chr14	-	1917	7	FSM	ENSMUSG00000034194.19	ENSMUST00000121142.4	1958	7	33	8	33	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGGTGTATTGATTGC	NA	NA	NA	NA	NA	NA	NA	NA	69944909	69934764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69935052_69936032_69936129_69937408_69937480_69941402_69941576_69942582_69943328_69943995_69944134_69944502
ENSMUSG00000034201.14_2	chr11	-	2832	7	FSM	ENSMUSG00000034201.14	ENSMUST00000056649.13	2847	7	9	6	9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGCATTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5015318	5010377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5014836_5015095_5015214
ENSMUSG00000034201.14_5	chr11	-	2526	6	FSM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACAGTTTTTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	5015275	5010382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014479_5015214
ENSMUSG00000034201.14_6	chr11	-	2460	5	ISM	ENSMUSG00000034201.14	ENSMUST00000109895.2	2530	6	796	10	796	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGCATTTACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5014481	5010390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825
ENSMUSG00000034201.14_8	chr11	-	2447	6	FSM	ENSMUSG00000034201.14	ENST00000621062.4	2453	6	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCTGTTTTTTGGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	5015294	5010504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5011818_5012154_5012327_5012414_5012512_5012593_5012702_5013825_5014503_5015214
ENSMUSG00000034203.9_0	chr6	-	3449	3	FSM	ENSMUSG00000034203.9	ENSMUST00000040835.9	3472	3	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAGCAGTTTATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	91450515	91439163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_91442296_91444664_91444764_91450297
ENSMUSG00000034205.17_0	chr14	+	5303	14	FSM	ENSMUSG00000034205.17	ENSMUST00000022660.14	5316	14	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGGCTCGTCTCGGATT	NA	NA	NA	NA	NA	NA	NA	NA	69846528	69933282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_69846744_69871332_69871740_69882144_69882321_69898087_69898300_69901348_69901572_69904715_69904900_69910830_69910983_69913124_69913293_69915261_69915425_69919543_69919788_69926476_69926593_69927582_69927720_69929762_69929875_69930488
ENSMUSG00000034206.16_0	chr16	+	8524	30	FSM	ENSMUSG00000034206.16	ENSMUST00000054034.7	8552	30	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATATTAATGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36832169	36915773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36832422_36833468_36833649_36835440_36835572_36837560_36837718_36843095_36843205_36848131_36848352_36849704_36849853_36853753_36853901_36855158_36855372_36860844_36860982_36862083_36862289_36862475_36862619_36865099_36865294_36866111_36866237_36868900_36869145_36880350_36883332_36885618_36885763_36887126_36887324_36891934_36892176_36894268_36894463_36897379_36897518_36898649_36898825_36902389_36902514_36903077_36903200_36906869_36907055_36909631_36909744_36911392_36911518_36913183_36913338_36914375_36914492_36914862
ENSMUSG00000034209.5_0	chr11	+	1078	3	FSM	ENSMUSG00000034209.5	ENSMUST00000037218.2	1110	3	19	13	19	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTAAATGCACAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	5008146	5010372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5008525_5009432_5009558_5009797
ENSMUSG00000034210.15_0	chr4	+	2776	11	FSM	ENSMUSG00000034210.15	ENSMUST00000106525.9	2792	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGAGCCTCAGAATATGT	NA	NA	NA	NA	NA	NA	NA	NA	115594951	115631627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034
ENSMUSG00000034210.15_8	chr4	+	4291	12	FSM	ENSMUSG00000034210.15	ENSMUST00000074425.13	4300	12	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTCTGACTAGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	115595277	115634523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_115596038_115597588_115597738_115603654_115603801_115610117_115610217_115613629_115613741_115616005_115616093_115617066_115617259_115619414_115619496_115621768_115621881_115623589_115623710_115631034_115631203_115632257
ENSMUSG00000034211.15_0	chr5	+	5055	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119576.8	5061	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCCTCTGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129792560	129799614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792614_129792747_129792975_129793790_129793931_129794979
ENSMUSG00000034211.15_1	chr5	+	826	4	FSM	ENSMUSG00000034211.15	ENSMUST00000042191.12	832	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTTTTGGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	129792566	129795538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792614_129792747_129792828_129793790_129793931_129794979
ENSMUSG00000034211.15_3	chr5	+	2182	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121339.2	2182	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCACCAACTTGCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	129792574	129795939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792614_129792747_129793931_129794979
ENSMUSG00000034211.15_4	chr5	+	1199	4	FSM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGTAAATTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129792579	129795746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792614_129792747_129793006_129793790_129793931_129794979
ENSMUSG00000034211.15_5	chr5	+	4997	3	FSM	ENSMUSG00000034211.15	ENSMUST00000121813.8	868	3	131	-4260	112	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGCCTCTGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	129792752	129799614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792975_129793790_129793931_129794979
ENSMUSG00000034211.15_6	chr5	+	775	3	FSM	ENSMUSG00000034211.15	ENSMUST00000119985.2	859	3	111	-27	111	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTTTTGGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	129792751	129795538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129792828_129793790_129793931_129794979
ENSMUSG00000034211.15_9	chr5	+	1156	3	ISM	ENSMUSG00000034211.15	ENSMUST00000119604.8	1208	4	177	9	116	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAGTAAATTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	129792756	129795746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_129793006_129793790_129793931_129794979
ENSMUSG00000034212.15_0	chr1	-	806	4	FSM	ENSMUSG00000034212.15	ENST00000405002.5	825	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3840	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACCCTGCTTCAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	92835137	92813874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92814017_92823790_92823935_92827220_92827388_92834784
ENSMUSG00000034216.13_0	chr2	+	4040	5	FSM	ENSMUSG00000034216.13	ENSMUST00000037280.5	4054	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTACAGTCCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	119119229	119128927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119123399_119125271_119127374
ENSMUSG00000034216.13_2	chr2	+	559	4	FSM	ENSMUSG00000034216.13	ENST00000558474.1	573	4	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCACCACATCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119119524	119127612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119119612_119120633_119120776_119123178_119123271_119127374
ENSMUSG00000034216.13_4	chr2	+	473	3	ISM	ENSMUSG00000034216.13	ENST00000558474.1	573	4	1114	8	1114	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACCACCACATCCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	119120632	119127612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_119120776_119123178_119123271_119127374
ENSMUSG00000034218.17_6	chr9	-	9195	62	FSM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCACCCTTAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	53445250	53351046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959_53445073_53445164
ENSMUSG00000034218.17_7	chr9	-	9110	61	ISM	ENSMUSG00000034218.17	ENST00000675843.1	9207	62	182	7	182	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCACCCTTAAACTCGA	NA	NA	NA	NA	NA	NA	NA	NA	53445073	53351046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_53351230_53351330_53351468_53352973_53353038_53353706_53353822_53355291_53355379_53356644_53356811_53359352_53359503_53361817_53361935_53362848_53362990_53364652_53364736_53364831_53364971_53365588_53365748_53366015_53366130_53367067_53367276_53367793_53368009_53368677_53368782_53370102_53370277_53371012_53371248_53372190_53372311_53373780_53373886_53375452_53375602_53376331_53376435_53376525_53376615_53379264_53379353_53382651_53382808_53384915_53385004_53390880_53391059_53391873_53392051_53393601_53393744_53395372_53395545_53397308_53397405_53398113_53398247_53399205_53399371_53399849_53400022_53401410_53401611_53402213_53402341_53403540_53403669_53404337_53404585_53405911_53406082_53407151_53407326_53408432_53408554_53410156_53410288_53410421_53410498_53411971_53412128_53412219_53412303_53414244_53414445_53415245_53415427_53417842_53417933_53419077_53419204_53421462_53421589_53423003_53423230_53424404_53424501_53426457_53426653_53427504_53427877_53429802_53429970_53431291_53431456_53433347_53433587_53435646_53435813_53438472_53438638_53442930_53443077_53444959
ENSMUSG00000034220.8_0	chr1	+	4161	9	FSM	ENSMUSG00000034220.8	ENSMUST00000045970.8	4176	9	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCAAGTGTTGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	92759377	92788497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92759820_92781068_92781228_92782579_92782969_92783628_92783795_92784708_92784840_92784969_92785090_92785193_92785328_92785576_92785753_92786053
ENSMUSG00000034226.8_0	chr2	-	1687	3	FSM	ENSMUSG00000034226.8	ENSMUST00000037360.8	1703	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCTGTCTGTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	119101739	119099683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119100969_119101162_119101222_119101396
ENSMUSG00000034235.18_1	chr14	-	6564	21	FSM	ENSMUSG00000034235.18	ENSMUST00000022356.12	6580	21	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATCTCTTGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	20691121	20598985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20600529_20602141_20602329_20606314_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149_20657974_20690984
ENSMUSG00000034235.18_5	chr14	-	5680	21	FSM	ENSMUSG00000034235.18	ENST00000680396.1	5700	21	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTATAAGATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	20657965	20599007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20599237_20599922_20600529_20606329_20606434_20610913_20612311_20614935_20615132_20616010_20616131_20620315_20620484_20623835_20623970_20626540_20626773_20627002_20627381_20627522_20627655_20631524_20631696_20633389_20633559_20636067_20636218_20638142_20638290_20638400_20638507_20639251_20639335_20639441_20639556_20641546_20641682_20654119_20654213_20657149
ENSMUSG00000034239.15_0	chr11	-	138	2	FSM	ENSMUSG00000034239.15	ENST00000582111.2	148	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATATGTAAGTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	103499777	103495345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103495410_103499703
ENSMUSG00000034243.18_0	chr16	+	10982	22	FSM	ENSMUSG00000034243.18	ENSMUST00000114812.9	11001	22	8	11	8	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAAGGAATTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36695537	36753436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36695626_36705372_36705551_36706492_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ENSMUSG00000034243.18_10	chr16	+	10896	21	ISM	ENSMUSG00000034243.18	ENSMUST00000114812.9	11001	22	9841	11	-1125	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAAGGAATTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36705370	36753436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_36705551_36706492_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ENSMUSG00000034243.18_11	chr16	+	10829	21	FSM	ENSMUSG00000034243.18	ENSMUST00000039855.9	10847	21	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAAGGAATTGTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36706502	36753436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36706591_36707600_36707766_36707918_36708069_36709733_36709857_36711728_36711855_36713677_36713801_36715192_36715307_36718866_36719270_36720819_36720936_36724914_36725030_36728183_36728258_36732233_36737363_36738270_36740159_36744994_36745174_36746097_36746261_36746450_36746589_36748616_36748761_36748997_36749096_36749617_36749753_36751920_36752027_36752184
ENSMUSG00000034245.11_3	chr6	+	416	3	FSM	ENSMUSG00000034245.11	ENST00000405025.5	426	3	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTACGTCCTAGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	91134387	91149321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91134528_91136142_91136244_91149146
ENSMUSG00000034245.11_4	chr6	+	530	3	FSM	ENSMUSG00000034245.11	ENST00000402259.5	541	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCTACTCACAGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	91134391	91150245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91134528_91149146_91149326_91150030
ENSMUSG00000034245.11_6	chr6	+	727	5	FSM	ENSMUSG00000034245.11	ENST00000404040.5	739	5	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCTACTCACAGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	91134392	91150245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91134528_91136142_91136244_91146376_91146474_91149146_91149326_91150030
ENSMUSG00000034245.11_7	chr6	+	985	8	FSM	ENSMUSG00000034245.11	ENST00000446613.6	996	8	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGGCTACTCACAGAACATT	NA	NA	NA	NA	NA	NA	NA	NA	91134391	91150245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91134528_91136142_91136244_91142542_91142660_91144785_91144863_91145790_91145854_91146376_91146474_91149146_91149326_91150030
ENSMUSG00000034247.10_0	chr11	-	5952	12	FSM	ENSMUSG00000034247.10	ENSMUST00000041272.10	5968	12	12	4	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCGTTGTGTTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103303501	103255104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103257820_103258423_103258582_103258933_103258998_103261687_103261882_103264765_103264912_103267418_103268340_103270859_103271179_103277783_103278175_103285513_103286141_103287852_103288101_103294650_103294737_103303418
ENSMUSG00000034248.8_0	chr14	-	4154	4	FSM	ENSMUSG00000034248.8	ENSMUST00000037064.5	4174	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGAAACCATTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	69522550	69479305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69482804_69485029_69485087_69486842_69487072_69522180
ENSMUSG00000034252.15_1	chr9	+	5093	23	FSM	ENSMUSG00000034252.15	ENSMUST00000037484.15	5111	23	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCATCTGATGCTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	79974197	80052230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUSG00000034252.15_12	chr9	+	3402	23	ISM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	19944	6	19944	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACACAGCATTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	79994718	80051182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUSG00000034252.15_5	chr9	+	3841	19	FSM	ENSMUSG00000034252.15	ENSMUST00000164859.8	3853	19	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGGAGGAAATGATTAATT	NA	NA	NA	NA	NA	NA	NA	NA	79974258	80051442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_79974855_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUSG00000034252.15_8	chr9	+	3460	24	FSM	ENSMUSG00000034252.15	ENSMUST00000165607.9	3495	24	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGACACAGCATTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	79974803	80051182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_79974855_79994711_79994806_79997130_79997189_79999548_79999695_80000818_80000924_80006167_80006189_80010975_80011047_80018592_80018736_80021008_80021397_80023813_80024047_80025759_80025925_80028608_80028643_80029145_80029341_80031001_80031229_80033424_80033535_80033617_80033735_80038020_80038141_80040170_80040264_80043739_80044165_80046325_80046430_80048099_80048189_80049364_80049434_80049526_80049678_80050931
ENSMUSG00000034254.18_0	chr17	+	2168	7	FSM	ENSMUSG00000034254.18	ENSMUST00000037489.15	2190	7	16	6	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGTGGTTGATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	34824850	34832417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34825146_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_4	chr17	+	1936	7	FSM	ENSMUSG00000034254.18	ENSMUST00000114140.10	1941	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGTGGTTGATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	34827987	34832417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34828051_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_5	chr17	+	1888	7	FSM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGAGAAAGAGAGACGT	NA	NA	NA	NA	NA	NA	NA	NA	34828584	34832375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34828642_34829418_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034254.18_6	chr17	+	1819	6	ISM	ENSMUSG00000034254.18	ENSMUST00000174595.2	1911	7	858	11	858	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGAGACGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	34829436	34832381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34829619_34829845_34829980_34830247_34830424_34830578_34830675_34830764_34830841_34831226
ENSMUSG00000034255.18_0	chr11	-	1782	14	FSM	ENSMUSG00000034255.18	ENST00000528384.5	1791	14	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGACCGTGGGTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	103231073	103223689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_103223867_103223976_103224083_103224170_103224306_103224396_103224475_103224665_103224765_103224836_103224960_103225083_103225190_103226026_103226126_103228550_103228656_103229132_103229224_103229513_103229576_103229779_103229935_103230280_103230464_103230810
ENSMUSG00000034259.9_0	chr15	+	1781	3	FSM	ENSMUSG00000034259.9	ENSMUST00000059045.8	1796	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCACTGGACTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	76211604	76214870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76211864_76213229_76213437_76213555
ENSMUSG00000034259.9_1	chr15	+	1788	3	NNC	ENSMUSG00000034259.9	novel	1796	3	NA	NA	5	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCACTGGACTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	76211601	76214870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_+_76211868_76213229_76213437_76213555
ENSMUSG00000034263.14_0	chr9	+	2812	13	FSM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAAGTTATTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	64868186	64894252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64868221_64868975_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_5	chr9	+	2769	12	ISM	ENSMUSG00000034263.14	ENSMUST00000170517.9	2820	13	798	8	766	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAAGTTATTAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	64868984	64894252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_64869281_64871607_64871886_64873971_64874080_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034263.14_9	chr9	+	1459	10	FSM	ENSMUSG00000034263.14	ENST00000442903.3	1468	10	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTCACTTTGTCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	64871668	64893407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64871886_64879254_64879411_64879973_64880093_64880499_64880643_64882898_64882992_64885418_64885564_64887056_64887191_64889270_64889390_64891259_64891326_64893140
ENSMUSG00000034265.9_1	chr17	+	2317	9	FSM	ENSMUSG00000034265.9	ENST00000359775.10	2331	9	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCACAGGTGACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5542899	5803389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5543967_5698177_5698339_5735929_5736089_5762662_5762801_5765243_5765305_5775509_5775605_5777099_5777210_5781746_5781850_5802966
ENSMUSG00000034266.7_0	chr12	+	915	3	FSM	ENSMUSG00000034266.7	ENSMUST00000040536.6	955	3	31	9	31	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCAGCCCTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	85733473	85755852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85733748_85736041_85736147_85755316
ENSMUSG00000034269.13_0	chr6	+	6742	22	FSM	ENSMUSG00000034269.13	ENSMUST00000042889.12	6755	22	0	13	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCATCATAATGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	113054325	113130383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113054674_113081895_113082083_113086845_113086952_113087334_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ENSMUSG00000034269.13_1	chr6	+	6506	22	FSM	ENSMUSG00000034269.13	ENSMUST00000113157.8	6527	22	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATAATCATCATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	113054614	113130379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113054674_113081895_113082083_113086845_113086952_113087277_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ENSMUSG00000034269.13_3	chr6	+	6445	21	FSM	ENSMUSG00000034269.13	ENSMUST00000113155.2	6362	21	-100	17	-100	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCATAATCATCATAATGT	NA	NA	NA	NA	NA	NA	NA	NA	113081897	113130379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113082083_113086845_113086952_113087277_113087487_113087826_113087886_113088318_113088498_113091804_113092048_113092488_113092638_113092965_113093084_113093740_113093851_113094328_113094579_113095218_113095306_113096376_113096635_113097801_113098123_113098528_113098772_113105372_113105503_113114913_113115162_113120573_113121045_113124400_113124700_113126515_113126650_113127062_113127152_113127822
ENSMUSG00000034271.17_0	chr12	+	820	4	FSM	ENSMUSG00000034271.17	ENST00000419727.6	830	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAGGGGCTGTCCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	85645930	85685966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85646002_85654915_85655140_85678418_85678524_85685546
ENSMUSG00000034271.17_4	chr12	+	749	3	ISM	ENSMUSG00000034271.17	ENSMUST00000171754.3	1559	4	8126	684	8126	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGGGCTGTCCCACTCCA	NA	NA	NA	NA	NA	NA	NA	NA	85654917	85685968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_85655140_85678418_85678524_85685546
ENSMUSG00000034274.12_0	chr11	+	2098	19	FSM	ENSMUSG00000034274.12	ENSMUST00000101615.9	2116	19	9	9	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGACTCTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4845328	4878858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4845379_4849790_4849907_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034274.12_1	chr11	+	2228	20	FSM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGACTCTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4845342	4878858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4845379_4849790_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034274.12_10	chr11	+	2180	19	ISM	ENSMUSG00000034274.12	ENSMUST00000038237.8	2235	20	4460	7	4460	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGGACTCTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4849802	4878858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_4849907_4851151_4851296_4852085_4852200_4852334_4852433_4854094_4854242_4855640_4855756_4860626_4860760_4862780_4862859_4864269_4864311_4864521_4864622_4865488_4865598_4868123_4868226_4869732_4869830_4870376_4870492_4871921_4872026_4872138_4872227_4874747_4874864_4876045_4876237_4878674
ENSMUSG00000034275.19_0	chr9	+	16108	20	FSM	ENSMUSG00000034275.19	ENSMUST00000214357.2	16144	20	31	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTTTGTTTCCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	27210530	27268837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234656_27235472_27235597_27238141_27238318_27239775_27240003_27240834_27240920_27242946_27243109_27243797_27243844_27244373_27246030_27253806_27253929_27257065
ENSMUSG00000034275.19_1	chr9	+	6111	20	FSM	ENSMUSG00000034275.19	ENST00000533871.8	6127	20	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATCTCTCTCCAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	27210556	27258878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_27210814_27220699_27220898_27222862_27223010_27228650_27228803_27229104_27229223_27230501_27230644_27230819_27230966_27233468_27233612_27233912_27234054_27234139_27234257_27234504_27234656_27235472_27235585_27238141_27238318_27239775_27240003_27240834_27240920_27242946_27243109_27243797_27243844_27244373_27246030_27253806_27253929_27257065
ENSMUSG00000034278.4_0	chr2	-	998	11	FSM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTCTACTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119039273	119002987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826_119016897_119039168
ENSMUSG00000034278.4_1	chr2	-	895	10	ISM	ENSMUSG00000034278.4	ENSMUST00000038439.4	1008	11	22378	7	22378	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGTCTACTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	119016898	119002987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_119003167_119009832_119009944_119010365_119010447_119010967_119011046_119011406_119011451_119014079_119014177_119014397_119014484_119016176_119016265_119016509_119016569_119016826
ENSMUSG00000034282.4_0	chr11	-	6172	22	FSM	ENSMUSG00000034282.4	ENST00000586740.1	6182	22	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGCCAAGATCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116128848	116111607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116115028_116115893_116115987_116116087_116116199_116116309_116116394_116117814_116117966_116118383_116118578_116118667_116118807_116118884_116119064_116120226_116120415_116120519_116120669_116120794_116120950_116121241_116121389_116121743_116121870_116123219_116123316_116123455_116123564_116123650_116123813_116123929_116123969_116124211_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
ENSMUSG00000034282.4_17	chr11	-	1052	8	FSM	ENSMUSG00000034282.4	ENST00000399134.5	1070	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTACCGTAGGGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	116128893	116123233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116123316_116123455_116123564_116123650_116123813_116124187_116124338_116124980_116125108_116125194_116125350_116125757_116125858_116128725
ENSMUSG00000034285.16_0	chr11	+	1914	10	FSM	ENSMUSG00000034285.16	ENSMUST00000038570.9	1926	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTACGTTGTGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4823957	4844195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4824104_4833367_4833496_4833725_4833772_4834021_4834117_4838879_4838951_4839096_4839238_4839532_4839565_4839891_4839987_4841402_4841487_4843119
ENSMUSG00000034290.10_0	chr12	-	6046	23	FSM	ENSMUSG00000034290.10	ENST00000238616.10	6055	23	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAACTAGGAAGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	85385994	85345333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85345853_85346004_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361175_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ENSMUSG00000034290.10_9	chr12	-	5547	22	FSM	ENSMUSG00000034290.10	ENST00000678037.1	5568	22	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAGGATTGTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	85385993	85346016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85348701_85350240_85350448_85352236_85352399_85352910_85353141_85354703_85354764_85355592_85355764_85357160_85357323_85358111_85358221_85359719_85359876_85360955_85361003_85361142_85361377_85362353_85362499_85367487_85367681_85368802_85368854_85372081_85372147_85374162_85374274_85376617_85376750_85379274_85379381_85380759_85380831_85381371_85381428_85383081_85383260_85385776
ENSMUSG00000034292.14_2	chr1	+	3452	15	FSM	ENSMUSG00000034292.14	ENSMUST00000047242.9	3474	15	18	4	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGTATGGACTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	91422433	91457025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91422611_91425674_91425744_91427223_91427386_91428494_91428633_91428726_91429147_91433144_91433217_91435214_91435291_91446015_91446037_91447299_91447385_91447777_91447862_91448605_91448730_91448908_91448946_91450552_91450630_91453600_91453825_91455339
ENSMUSG00000034295.11_1	chr18	+	4938	25	FSM	ENSMUSG00000034295.11	ENSMUST00000234834.2	4956	25	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCACCATAAGAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	24842512	25266551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161227_25189316_25189452_25193382_25193434_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034295.11_6	chr18	+	4472	24	FSM	ENSMUSG00000034295.11	ENST00000359247.8	4483	24	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGCTCCAAGTGTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	24842675	25266282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24842831_24887275_24887383_24903539_24903605_25030693_25030762_25036949_25037056_25102216_25102312_25118270_25118383_25123029_25123125_25127472_25127617_25134847_25135090_25161121_25161244_25189316_25189452_25199273_25199483_25218390_25218670_25223086_25223965_25234582_25234742_25243111_25243295_25245602_25245723_25246566_25246729_25248755_25248947_25253175_25253369_25258799_25258975_25263589_25263752_25265967
ENSMUSG00000034297.15_0	chr11	-	10526	30	FSM	ENSMUSG00000034297.15	ENSMUST00000043624.9	10546	30	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTTCCTTGTGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	86248416	86157866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86161945_86163288_86163390_86166199_86166374_86167645_86167795_86169295_86169482_86169589_86169749_86170418_86170562_86174025_86174250_86174576_86174769_86175938_86176159_86177259_86177717_86178916_86179107_86179758_86179983_86181868_86182031_86189105_86190023_86191475_86191673_86191955_86192171_86192290_86192382_86194359_86194482_86197809_86197889_86199524_86199739_86210173_86210858_86218627_86218739_86219272_86219436_86219993_86220189_86221813_86222012_86222708_86222855_86236685_86236855_86246099_86246335_86248285
ENSMUSG00000034300.18_0	chr18	+	4457	5	FSM	ENSMUSG00000034300.18	ENSMUST00000049281.12	4475	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAACCTTGTGTACGATA	NA	NA	NA	NA	NA	NA	NA	NA	34891970	34906807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34892198_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ENSMUSG00000034300.18_1	chr18	+	4251	5	FSM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAATAATCCATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34892608	34906786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34892651_34895547_34895778_34896125_34896184_34901220_34902006_34903650
ENSMUSG00000034300.18_2	chr18	+	4203	4	ISM	ENSMUSG00000034300.18	ENSMUST00000097622.4	4256	5	2945	5	2945	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAATAATCCATTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	34895553	34906786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_34895778_34896125_34896184_34901220_34902006_34903650
ENSMUSG00000034311.4_0	chrX	+	4968	30	FSM	ENSMUSG00000034311.4	ENSMUST00000048962.4	4983	30	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTAGTTGAAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	99669349	99770812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99670195_99670309_99670425_99677444_99677636_99679289_99679383_99681889_99682057_99682282_99682378_99708341_99708459_99709278_99709455_99713514_99713577_99720892_99721026_99723451_99723511_99723614_99723721_99732663_99732721_99734119_99734306_99738476_99738581_99739603_99739749_99741036_99741148_99747647_99747732_99748395_99748510_99755397_99755554_99755667_99755769_99757483_99757614_99759186_99759358_99759876_99759985_99760936_99761015_99761542_99761642_99762099_99762277_99768247_99768365_99769733_99769857_99770064
ENSMUSG00000034312.16_25	chr6	-	3215	11	FSM	ENSMUSG00000034312.16	ENST00000618604.4	3232	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAGCCCAGGCAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	90671819	90639438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_90639938_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540
ENSMUSG00000034312.16_3	chr6	-	3027	13	FSM	ENSMUSG00000034312.16	ENST00000273221.8	3040	13	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGAAGGAGTTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	90693341	90637911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_90638008_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90693189
ENSMUSG00000034312.16_4	chr6	-	3427	13	FSM	ENSMUSG00000034312.16	ENST00000646269.1	3436	13	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGGAAGGAGTTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	90741288	90637911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_90638008_90641003_90641054_90644881_90645059_90645622_90645785_90646267_90646368_90647390_90647517_90648928_90649102_90653729_90653897_90655005_90655129_90657472_90657635_90666561_90667809_90671540_90671833_90740736
ENSMUSG00000034317.15_0	chr3	-	2926	3	FSM	ENSMUSG00000034317.15	ENSMUST00000107802.8	2939	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAGTGGTGACATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	68952081	68942626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_68945342_68951100_68951176_68951945
ENSMUSG00000034320.15_0	chr18	-	7797	4	FSM	ENSMUSG00000034320.15	ENSMUST00000146409.8	7814	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATTATTTTAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61344674	61325997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61332731_61334752_61335476_61337381_61337518_61344469
ENSMUSG00000034321.15_0	chr19	-	2274	6	FSM	ENSMUSG00000034321.15	ENSMUST00000112123.4	2296	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACAGCCATGTGAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	41921847	41910737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034321.15_10	chr19	-	468	6	NIC	ENSMUSG00000034321.15	novel	1018	8	NA	NA	7	-9	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAAGCCCACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	41921597	41912428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41921487
ENSMUSG00000034321.15_3	chr19	-	1018	8	FSM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTGGAAAAAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41921735	41912004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487_41921604_41921690
ENSMUSG00000034321.15_4	chr19	-	920	7	ISM	ENSMUSG00000034321.15	ENSMUST00000075280.12	1018	8	138	47	7	-47	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATACCTTATGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	41921597	41912051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_41912528_41913149_41913235_41913627_41913679_41914970_41915005_41916463_41916553_41919794_41919870_41921487
ENSMUSG00000034321.15_9	chr19	-	405	5	FSM	ENSMUSG00000034321.15	ENST00000485122.6	423	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAAGCCCACCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	41921595	41912428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41912528_41914970_41915005_41916463_41916553_41919794_41919870_41921487
ENSMUSG00000034327.18_0	chr14	+	3151	11	FSM	ENSMUSG00000034327.18	ENSMUST00000078053.13	3157	11	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTGGTTTCCTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	67953552	67979759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_67953834_67962006_67962129_67963775_67963820_67966098_67966196_67966799_67966859_67967053_67967183_67970609_67970678_67970795_67970892_67975054_67975161_67975825_67975960_67977744
ENSMUSG00000034329.17_0	chr11	-	6925	20	FSM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGTGAAAAAGGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	86092019	85948969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697_86089821_86091934
ENSMUSG00000034329.17_1	chr11	-	6841	19	ISM	ENSMUSG00000034329.17	ENSMUST00000044423.4	6931	20	2198	6	2198	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGTGAAAAAGGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	86089821	85948969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_85952872_85955603_85955928_85965104_85965188_85968682_85968796_85999592_85999715_86001168_86001329_86026084_86026247_86029588_86029730_86029839_86030006_86034082_86034238_86036887_86037021_86039183_86039384_86043413_86043636_86048413_86048705_86077790_86077920_86080557_86080686_86083640_86083815_86088694_86088807_86089697
ENSMUSG00000034330.11_0	chr8	+	4291	33	FSM	ENSMUSG00000034330.11	ENSMUST00000081232.9	4298	33	5	2	5	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGTTCTGTACCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	118225034	118361879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_118225169_118230873_118231113_118282713_118282858_118284041_118284136_118284807_118284856_118293540_118293626_118294902_118294987_118300079_118300124_118300655_118300729_118304561_118304664_118306514_118306634_118308395_118308482_118310221_118310343_118311902_118312072_118313199_118313305_118316002_118316093_118316581_118316758_118316857_118317059_118319364_118319485_118323000_118323182_118325160_118325233_118327866_118327977_118330560_118330658_118331929_118331997_118333809_118333968_118335876_118335980_118337471_118337682_118339642_118339789_118340906_118341022_118341953_118342122_118347913_118348003_118361012_118361198_118361523
ENSMUSG00000034333.16_0	chr15	+	5421	3	FSM	ENSMUSG00000034333.16	ENSMUST00000041297.15	5425	3	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTGACTGATGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	88635865	88668718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88636006_88638962_88639137_88663611
ENSMUSG00000034341.18_0	chr11	-	1808	8	FSM	ENSMUSG00000034341.18	ENSMUST00000074628.13	1826	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGAGGTTCTCTGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	115977809	115969404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115970423_115970533_115970611_115971047_115971171_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUSG00000034341.18_6	chr11	-	1667	8	FSM	ENSMUSG00000034341.18	ENST00000590221.5	1680	8	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATATTAATGTGAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	115977756	115969480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115970423_115970533_115970611_115971047_115971159_115971371_115971507_115972057_115972151_115973101_115973238_115974664_115974774_115977692
ENSMUSG00000034342.10_0	chr9	-	11353	16	FSM	ENSMUSG00000034342.10	ENSMUST00000206720.2	11372	16	13	6	13	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACACTTGAGTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	44145333	44054278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44063035_44064085_44064266_44065057_44065156_44065486_44065628_44067912_44068008_44069810_44070189_44070273_44070406_44074635_44074840_44075422_44075555_44076098_44076187_44077749_44077888_44078506_44078629_44080316_44080474_44084549_44084697_44112256_44112505_44144996
ENSMUSG00000034343.15_0	chr1	+	1415	8	FSM	ENSMUSG00000034343.15	ENST00000414443.5	1431	8	10	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAGGCTTCCCTCGATTG	NA	NA	NA	NA	NA	NA	NA	NA	91178035	91213890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91178160_91181981_91182116_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_14	chr1	+	1524	11	FSM	ENSMUSG00000034343.15	ENSMUST00000171112.8	1547	11	12	11	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGTACAATTTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	91178299	91213638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91178576_91181481_91181550_91181936_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_17	chr1	+	1047	8	FSM	ENSMUSG00000034343.15	ENST00000409332.5	1061	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGATTTGTAATTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	91181992	91213627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91182116_91189988_91190019_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_3	chr1	+	1347	10	FSM	ENSMUSG00000034343.15	ENSMUST00000178627.8	1363	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAATACAAAGAGACC	NA	NA	NA	NA	NA	NA	NA	NA	91178047	91213738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91178160_91181981_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034343.15_7	chr1	+	5617	10	FSM	ENSMUSG00000034343.15	ENSMUST00000171165.8	5654	10	8	29	8	-29	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATCATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91178066	91218030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91178160_91181984_91182116_91189988_91190019_91192939_91193006_91202971_91203040_91204107_91204179_91205982_91206041_91207226_91207260_91211668_91211732_91213026
ENSMUSG00000034345.15_0	chr17	+	2231	3	FSM	ENSMUSG00000034345.15	ENSMUST00000039487.10	2245	3	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGGTGGAGAGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	6130072	6136790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6130187_6131076_6131150_6134746
ENSMUSG00000034345.15_4	chr17	+	851	3	FSM	ENSMUSG00000034345.15	ENSMUST00000100955.3	879	3	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTATCCTTTTACCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	6130228	6135403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6130350_6131076_6131150_6134746
ENSMUSG00000034349.15_0	chr3	+	4297	24	FSM	ENSMUSG00000034349.15	ENSMUST00000042901.15	4316	24	11	8	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAATGACAAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	68912081	68941948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68912424_68913408_68913547_68914521_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUSG00000034349.15_18	chr3	+	3975	24	FSM	ENSMUSG00000034349.15	ENSMUST00000107803.7	3983	24	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGAATGACAAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	68912328	68941948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68912424_68913408_68913547_68914596_68914701_68915261_68915454_68916816_68916994_68923425_68923591_68923984_68924113_68925403_68925545_68926507_68926659_68928568_68928734_68929558_68929793_68931497_68931684_68933156_68933319_68934825_68935052_68935151_68935232_68935777_68935931_68936733_68936861_68937575_68937766_68938740_68938886_68939069_68939244_68940039_68940223_68940358_68940592_68941270_68941455_68941706
ENSMUSG00000034354.18_0	chr11	-	5666	18	FSM	ENSMUSG00000034354.18	ENSMUST00000109943.10	5674	18	3	5	3	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCGAACGAGTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	4544812	4430872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4544602
ENSMUSG00000034354.18_3	chr11	-	5534	18	FSM	ENSMUSG00000034354.18	ENSMUST00000040448.13	5534	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGCGAACGAGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	4496268	4430874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4432940_4435362_4435452_4437233_4438633_4439621_4439768_4440977_4441149_4441806_4441993_4442718_4442915_4447337_4447450_4447930_4448063_4448887_4449094_4454031_4454146_4457589_4457687_4467740_4467908_4470831_4470915_4477835_4477953_4478316_4478407_4481221_4481306_4496188
ENSMUSG00000034361.11_0	chr8	+	2333	16	FSM	ENSMUSG00000034361.11	ENSMUST00000048653.10	2342	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAAGCTCCTTCCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	95259626	95297159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295218_95295456_95296598
ENSMUSG00000034361.11_5	chr8	+	2103	16	FSM	ENSMUSG00000034361.11	ENSMUST00000109537.2	2121	16	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCATAACTGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95259702	95297008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95259822_95274955_95275174_95277797_95277978_95278367_95278443_95280017_95280090_95281302_95281387_95281557_95281648_95282136_95282236_95282599_95282687_95284047_95284108_95284752_95284887_95286736_95286792_95289365_95289418_95290584_95290719_95295221_95295456_95296598
ENSMUSG00000034371.10_0	chr19	-	2720	17	ISM	ENSMUSG00000034371.10	ENSMUST00000237788.2	2758	18	1167	6	-7	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAAGATTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	10581629	10565160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10566211_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531
ENSMUSG00000034371.10_1	chr19	-	2752	18	FSM	ENSMUSG00000034371.10	ENSMUST00000237788.2	2758	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGAAGATTTTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	10582796	10565160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10566211_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
ENSMUSG00000034371.10_2	chr19	-	2417	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236950.2	2437	18	12	8	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATAGGACTTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	10582736	10569568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582582
ENSMUSG00000034371.10_3	chr19	-	2459	18	FSM	ENSMUSG00000034371.10	ENSMUST00000236607.2	2516	18	50	7	50	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATAGGACTTTGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	10582968	10569568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10570154_10570510_10570601_10570689_10570724_10570827_10570932_10571033_10571141_10571794_10571933_10572066_10572187_10572657_10572775_10573375_10573466_10573561_10573647_10573721_10573757_10574295_10574386_10574673_10574753_10576395_10576578_10576671_10576783_10577934_10578125_10581531_10581638_10582772
ENSMUSG00000034377.11_0	chr17	+	8762	14	FSM	ENSMUSG00000034377.11	ENSMUST00000149756.8	8784	14	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATCAAAAAATATCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	6157176	6290892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6157272_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ENSMUSG00000034377.11_1	chr17	+	2967	13	FSM	ENSMUSG00000034377.11	ENST00000367094.6	2980	13	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGAGCTCATACTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	6188382	6286656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6286500
ENSMUSG00000034377.11_8	chr17	+	9668	14	FSM	ENSMUSG00000034377.11	ENSMUST00000039655.3	9687	14	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATCAAAAAATATCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	6188430	6290892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6189432_6227103_6227233_6235411_6235574_6248946_6249128_6251974_6252110_6257165_6257333_6263658_6263884_6264909_6265145_6269642_6269788_6272578_6272724_6274426_6274521_6279609_6279754_6281986_6284500_6286500
ENSMUSG00000034379.10_0	chr16	+	2729	1	FSM	ENSMUSG00000034379.10	ENSMUST00000042203.10	2739	1	4	6	4	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAGTCTCAGATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	35861563	35864292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35861600_35864300
ENSMUSG00000034382.15_0	chr17	+	4835	5	FSM	ENSMUSG00000034382.15	ENSMUST00000150819.3	4866	5	30	1	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTAGGTTGGTGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	47747759	47781562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47747875_47757489_47757597_47774878_47774955_47776603_47779779_47780200
ENSMUSG00000034387.14_0	chr6	-	1072	11	FSM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCCTCTGATAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	112361413	112346668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_112346804_112351739_112351848_112352513_112352620_112353352_112353446_112354545_112354632_112356192_112356256_112357510_112357636_112357938_112358000_112359276_112359407_112360846_112360929_112361330
ENSMUSG00000034387.14_1	chr6	-	989	10	ISM	ENSMUSG00000034387.14	ENST00000544814.6	1083	11	490	6	490	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATCCTCTGATAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	112360928	112346668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_112346804_112351739_112351848_112352513_112352620_112353352_112353446_112354545_112354632_112356192_112356256_112357510_112357636_112357938_112358000_112359276_112359407_112360846
ENSMUSG00000034390.17_0	chr8	+	2379	21	FSM	ENSMUSG00000034390.17	ENSMUST00000166750.9	2408	21	10	19	10	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAACAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117983812	118186150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_117984141_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ENSMUSG00000034390.17_4	chr8	+	2235	21	FSM	ENSMUSG00000034390.17	ENSMUST00000095172.6	2276	21	22	19	22	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAACAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	118075930	118186150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_118076115_118103813_118103940_118111696_118111748_118137999_118138162_118142953_118142996_118149583_118149647_118153228_118153310_118156451_118156556_118157932_118158038_118163304_118163659_118172054_118172121_118173809_118173837_118174138_118174188_118175768_118175877_118178898_118179016_118179818_118179960_118180561_118180610_118181638_118181786_118182377_118182484_118183625_118183697_118186067
ENSMUSG00000034391.13_0	chr18	+	1540	10	FSM	ENSMUSG00000034391.13	ENSMUST00000223789.3	1557	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAATAAATGCTGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	84970248	84999492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_84970384_84975444_84975556_84976396_84976502_84977193_84977437_84978134_84978345_84980718_84980846_84982233_84982317_84983555_84983711_84995491_84995617_84999246
ENSMUSG00000034401.17_0	chr4	+	2452	13	FSM	ENSMUSG00000034401.17	ENSMUST00000038868.14	2466	13	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTACCTCTGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	111577187	111686332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_111577455_111603337_111603476_111604951_111605001_111624859_111624902_111625912_111626038_111631995_111632077_111636196_111636491_111637951_111638040_111641999_111642041_111656266_111656452_111663127_111663228_111679937_111680030_111685382
ENSMUSG00000034402.4_0	chr12	-	2632	9	ISM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	22247	6	22247	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATTTTTAGTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75201055	74944345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417_75184525_75200931
ENSMUSG00000034402.4_1	chr12	-	2702	10	FSM	ENSMUSG00000034402.4	ENST00000420622.6	2711	10	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATATTTTTAGTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	75223299	74944345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_74945229_75023244_75023498_75054373_75054574_75134178_75134606_75160964_75161358_75166694_75166811_75177671_75177801_75184417_75184525_75200931_75201056_75223229
ENSMUSG00000034403.17_0	chrX	-	3009	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113792.2	3038	3	13	16	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATAAAAAAGGTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	98514866	98509355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_98511921_98514222_98514463_98514662
ENSMUSG00000034403.17_1	chrX	-	2075	3	FSM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	3	30	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98514290	98509373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_98511189_98511728_98511921_98514222
ENSMUSG00000034403.17_2	chrX	-	2006	2	ISM	ENSMUSG00000034403.17	ENSMUST00000113790.8	2108	3	2374	30	2359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	98511919	98509373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_98511189_98511728
ENSMUSG00000034403.17_4	chrX	-	2654	2	FSM	ENSMUSG00000034403.17	ENSMUST00000167246.2	2666	2	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTGAAAAATAAAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	98514332	98509376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_98511921_98514222
ENSMUSG00000034403.17_5	chrX	-	2555	2	FSM	ENSMUSG00000034403.17	ENSMUST00000036354.7	2563	2	4	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAACAATGGCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	98514294	98509723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_98512207_98514222
ENSMUSG00000034403.17_6	chrX	-	2479	1	NIC	ENSMUSG00000034403.17	novel	3038	3	NA	NA	2076	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAACAATGGCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	98512202	98509723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_98509700_98512200
ENSMUSG00000034412.14_0	chr11	+	1921	9	FSM	ENSMUSG00000034412.14	ENSMUST00000180088.2	1921	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGTGTATAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	4136821	4165502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4137100_4155756_4155857_4159925_4160034_4162140_4162248_4162784_4162900_4162977_4163044_4163556_4163747_4163836_4163992_4164700
ENSMUSG00000034416.19_0	chr8	-	7373	43	FSM	ENSMUSG00000034416.19	ENST00000525539.5	7383	43	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGGGTTTAAACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	117809172	117722429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117722580_117724274_117724407_117724814_117724917_117726511_117726723_117736308_117736470_117738236_117738365_117740602_117740737_117741601_117741930_117743556_117743743_117746143_117746282_117747778_117747873_117748556_117748762_117750601_117750831_117755017_117755226_117756248_117756475_117757280_117757481_117759422_117759570_117761770_117761950_117762545_117762648_117764768_117765000_117767391_117767586_117768947_117769168_117769971_117770104_117771226_117771354_117772801_117772927_117774113_117774301_117776645_117776778_117777768_117777961_117778381_117778528_117781600_117781778_117783052_117783195_117784151_117784273_117786200_117786409_117787246_117787365_117789974_117790025_117790792_117790871_117792241_117792656_117794822_117795053_117799183_117799332_117802862_117802974_117807390_117807577_117808062_117808228_117808893
ENSMUSG00000034424.6_0	chr8	-	1414	5	FSM	ENSMUSG00000034424.6	ENSMUST00000040484.6	1443	5	11	18	11	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	987	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAGAAAAAAAAATAGAA	NA	NA	NA	NA	NA	NA	NA	NA	117720265	117708566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_117709466_117710546_117710679_117714051_117714116_117715862_117715943_117720026
ENSMUSG00000034429.16_0	chr15	+	1783	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109966.8	1803	4	10	10	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAATGGGAGAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75840981	75847588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75841254_75844930_75845058_75845390_75845505_75846318
ENSMUSG00000034429.16_2	chr15	+	1685	4	FSM	ENSMUSG00000034429.16	ENSMUST00000109967.10	1703	4	4	14	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACATAACTCAATGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	75841031	75847581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75841254_75844971_75845058_75845390_75845505_75846318
ENSMUSG00000034430.17_0	chr6	+	4116	10	FSM	ENSMUSG00000034430.17	ENSMUST00000075117.10	4126	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGCAAAAGCTTTTGCGC	NA	NA	NA	NA	NA	NA	NA	NA	90346475	90380462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90359503_90361149_90361235_90375743_90375914_90377763_90377866_90379001
ENSMUSG00000034430.17_1	chr6	+	1603	7	FSM	ENSMUSG00000034430.17	ENSMUST00000045740.8	1612	7	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAGTCAAGAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	90346590	90361189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_90347551_90349523_90349677_90349768_90349848_90350692_90350824_90355765_90355937_90358813_90358883_90361149
ENSMUSG00000034432.12_0	chr1	+	2276	8	FSM	ENSMUSG00000034432.12	ENSMUST00000036153.12	2287	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTAGTGGGTTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	90530712	90541062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90537814_90537923_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034432.12_2	chr1	+	636	7	FSM	ENSMUSG00000034432.12	ENST00000409334.5	651	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAAACAGACATGGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	90531200	90540018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_90531350_90532096_90532168_90533185_90533235_90534258_90534392_90538696_90538760_90539261_90539310_90539895
ENSMUSG00000034442.12_0	chr12	-	2057	5	FSM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGGATTTTGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	73333483	73326793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408_73332050_73333457
ENSMUSG00000034442.12_1	chr12	-	2021	4	ISM	ENSMUSG00000034442.12	ENSMUST00000116420.4	2066	5	1444	9	1444	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAGGATTTTGTAATTC	NA	NA	NA	NA	NA	NA	NA	NA	73332039	73326793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_73327407_73327778_73328431_73329385_73329511_73331408
ENSMUSG00000034445.9_0	chr19	+	3111	8	FSM	ENSMUSG00000034445.9	ENSMUST00000237814.2	3130	8	12	7	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10554547	10567186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034445.9_1	chr19	+	2644	8	FSM	ENSMUSG00000034445.9	ENSMUST00000235271.2	2661	8	10	7	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10554824	10567186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10555258_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034445.9_2	chr19	+	2142	7	FSM	ENSMUSG00000034445.9	ENSMUST00000237641.2	2149	7	2	5	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10554819	10567186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10555448_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10566492
ENSMUSG00000034445.9_4	chr19	+	2634	9	FSM	ENSMUSG00000034445.9	ENSMUST00000237581.2	2634	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATCAGAGGTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	10554854	10567186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10554928_10555097_10555448_10556345_10556439_10557826_10557927_10559661_10559861_10562545_10562755_10564054_10564210_10565185_10565343_10565888
ENSMUSG00000034449.8_0	chr11	-	1245	7	FSM	ENSMUSG00000034449.8	ENSMUST00000047560.8	1254	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCCCCCCCCCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	84719781	84711681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_84712128_84712228_84712295_84712490_84712584_84713136_84713267_84713897_84713993_84716193_84716404_84719576
ENSMUSG00000034450.9_0	chr14	-	606	5	FSM	ENSMUSG00000034450.9	ENST00000454030.1	620	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAAAGCTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	66241621	66227831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039_66240136_66241530
ENSMUSG00000034450.9_2	chr14	-	515	4	ISM	ENSMUSG00000034450.9	ENST00000454030.1	620	5	1493	7	1493	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTGAAAGCTCTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	66240135	66227831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_66227993_66228478_66228629_66235008_66235117_66240039
ENSMUSG00000034453.9_0	chr10	+	4951	28	FSM	ENSMUSG00000034453.9	ENSMUST00000077175.7	4975	28	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGTACTCAGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	84458170	84563033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84458403_84464113_84464147_84464346_84464404_84464490_84464556_84467648_84467725_84468318_84468420_84470764_84470857_84473918_84474037_84475605_84475715_84482659_84482783_84488537_84488658_84491808_84491944_84503185_84503348_84509191_84509393_84510420_84510584_84512746_84512901_84515609_84515685_84516229_84516329_84520040_84520169_84528660_84528871_84531418_84531578_84532812_84532931_84535262_84535406_84549492_84549597_84550108_84550276_84554273_84554388_84556207_84556382_84561514
ENSMUSG00000034457.11_0	chrX	-	4737	8	FSM	ENSMUSG00000034457.11	ENSMUST00000037353.10	4752	8	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACGTACAAATGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	96420817	96377455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_96381057_96382408_96382809_96385233_96385399_96386897_96386984_96387501_96387681_96405366_96405465_96414764_96414862_96420706
ENSMUSG00000034459.9_0	chr19	+	2656	2	FSM	ENSMUSG00000034459.9	ENSMUST00000102824.4	2656	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTTGGACACGGT	NA	NA	NA	NA	NA	NA	NA	NA	34618270	34627409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34618388_34624870
ENSMUSG00000034460.10_0	chr12	-	6392	3	FSM	ENSMUSG00000034460.10	ENSMUST00000043208.8	6402	3	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACATACTTTGTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	73160198	73146391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_73151013_73155434_73156124_73159116
ENSMUSG00000034460.10_1	chr12	-	6808	3	FSM	ENSMUSG00000034460.10	ENSMUST00000175693.3	6817	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTATAAGCCCGATTCACT	NA	NA	NA	NA	NA	NA	NA	NA	73160230	73150223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_73156124_73159116_73159932_73160137
ENSMUSG00000034462.10_0	chr5	+	5196	15	FSM	ENSMUSG00000034462.10	ENSMUST00000086831.4	5219	15	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAGTACCATGGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	104607330	104653677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104608092_104614748_104614863_104624908_104625043_104626656_104626908_104628015_104628241_104630890_104631120_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ENSMUSG00000034462.10_3	chr5	+	1695	10	FSM	ENSMUSG00000034462.10	ENST00000508588.5	1715	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTAAACCCGTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	104628057	104651707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104628241_104634512_104634681_104637098_104637281_104638509_104638631_104642758_104642858_104646306_104646429_104646623_104646742_104647035_104647200_104650157_104650306_104651317
ENSMUSG00000034463.5_0	chr14	-	3580	6	FSM	ENSMUSG00000034463.5	ENSMUST00000042046.5	3597	6	13	4	13	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGGGATGTGTCTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	66191371	66156846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66158638_66168246_66169291_66170552_66170652_66173811_66173932_66175659_66175759_66190944
ENSMUSG00000034471.13_0	chr11	-	4894	20	FSM	ENSMUSG00000034471.13	ENSMUST00000041684.11	4929	20	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGACTGGGCTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115704427	115690014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115690904_115691185_115691409_115691491_115692968_115693106_115693246_115693373_115693476_115693554_115693666_115693824_115693914_115694037_115694099_115694183_115694306_115694407_115694670_115695301_115695397_115695524_115695634_115695906_115696016_115697129_115697261_115697359_115697456_115697544_115697691_115698089_115698188_115698664_115698717_115702712_115703209_115704339
ENSMUSG00000034473.15_0	chr16	-	3974	7	FSM	ENSMUSG00000034473.15	ENSMUST00000043521.5	3992	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATCATGGAGAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	35184280	35131510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35134658_35139173_35139240_35149867_35149984_35167968_35168164_35169200_35169365_35181930_35182130_35184193
ENSMUSG00000034473.15_3	chr16	-	620	3	FSM	ENSMUSG00000034473.15	ENST00000481965.6	633	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCTGGTAAGAAAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	35182120	35134293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35134658_35139173_35139240_35181930
ENSMUSG00000034484.9_0	chr18	+	2046	15	FSM	ENSMUSG00000034484.9	ENSMUST00000037850.7	2067	15	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATAAACACGTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	53309398	53353927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_53309560_53322726_53322845_53327501_53327666_53330926_53330994_53331257_53331302_53332828_53332971_53336112_53336192_53342659_53342736_53343401_53343516_53343770_53343865_53345824_53346031_53349452_53349597_53351173_53351255_53351360_53351433_53353443
ENSMUSG00000034485.11_0	chr9	+	4412	19	FSM	ENSMUSG00000034485.11	ENSMUST00000214354.2	4417	19	5	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTACTTTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	60701828	60787641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761780_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ENSMUSG00000034485.11_3	chr9	+	4410	19	FSM	ENSMUSG00000034485.11	ENSMUST00000050183.7	4428	19	11	7	11	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTACTTTTCTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	60701840	60787645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_60701975_60748121_60748256_60753274_60753364_60755903_60755969_60756726_60756785_60757411_60757483_60757582_60757690_60761597_60761786_60763479_60763518_60766421_60766500_60768333_60768442_60770672_60770706_60770881_60770981_60773646_60773684_60774713_60774767_60776856_60779566_60781314_60781468_60783643_60783710_60787455
ENSMUSG00000034487.5_0	chr9	+	3635	8	FSM	ENSMUSG00000034487.5	ENSMUST00000037853.5	3642	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGCCTGCATAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	53295331	53313167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_53295587_53299679_53299878_53301734_53302022_53303214_53303432_53305235_53305433_53307143_53307339_53309219_53309325_53310986
ENSMUSG00000034488.15_0	chr13	+	2684	10	FSM	ENSMUSG00000034488.15	ENSMUST00000118731.8	2721	10	28	9	-11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGTTTGAGAATAATCT	NA	NA	NA	NA	NA	NA	NA	NA	88969618	89348648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_88970168_89092938_89093068_89125873_89125904_89190550_89190680_89242669_89242784_89279792_89279975_89325263_89325420_89328354_89328500_89332797_89332983_89347583
ENSMUSG00000034488.15_1	chr13	+	5294	11	FSM	ENSMUSG00000034488.15	ENSMUST00000081769.13	5317	11	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAATGCATCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88969643	89471333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_88970168_89092938_89093068_89125873_89125904_89190550_89190680_89242669_89242784_89279792_89279975_89325263_89325420_89328354_89328500_89332797_89332983_89437537_89437694_89467789
ENSMUSG00000034488.15_2	chr13	+	5138	10	FSM	ENSMUSG00000034488.15	ENSMUST00000043111.7	5156	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAATGCATCAGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	88969769	89471333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_88970168_89092938_89093068_89190550_89190680_89242669_89242784_89279792_89279975_89325263_89325420_89328354_89328500_89332797_89332983_89437537_89437694_89467789
ENSMUSG00000034501.8_0	chr12	+	4284	11	FSM	ENSMUSG00000034501.8	ENSMUST00000044352.8	4300	11	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCTAAATTTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72583162	72626883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_72583314_72588148_72588892_72602210_72602391_72602617_72603133_72603356_72603458_72603574_72603695_72613670_72614035_72616491_72616596_72620263_72621277_72622127_72622315_72626077
ENSMUSG00000034509.10_0	chr17	-	1264	3	FSM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTTTGATTTAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	46464473	46458314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46459211_46463704_46463968_46464368
ENSMUSG00000034509.10_1	chr17	-	855	2	ISM	ENSMUSG00000034509.10	ENSMUST00000171172.3	1272	3	425	393	425	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGTGAAGGTATAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	46464054	46458705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46459211_46463704
ENSMUSG00000034509.10_3	chr17	-	908	3	FSM	ENSMUSG00000034509.10	ENST00000451025.6	914	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAGGTATAAGGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	46471562	46458702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46459211_46463704_46464078_46471535
ENSMUSG00000034518.15_0	chr8	+	4165	11	FSM	ENSMUSG00000034518.15	ENSMUST00000041759.14	4191	11	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATATTTATAGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	75720001	75758592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75720378_75725462_75725567_75726187_75726337_75726440_75726520_75727277_75728213_75746871_75746954_75748430_75748496_75749826_75749933_75750625_75750796_75756115_75756239_75756616
ENSMUSG00000034520.15_0	chr11	-	2291	3	FSM	ENSMUSG00000034520.15	ENSMUST00000107075.9	2314	3	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102695710	102690410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102692022_102693666_102693743_102695106
ENSMUSG00000034520.15_1	chr11	-	1870	3	FSM	ENSMUSG00000034520.15	ENSMUST00000068933.12	1903	3	27	6	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102709978	102690410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102692022_102693666_102693743_102709795
ENSMUSG00000034520.15_2	chr11	-	1870	3	FSM	ENSMUSG00000034520.15	ENSMUST00000092567.11	1890	3	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGTCTGTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	102710512	102690410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102692022_102693666_102693743_102710329
ENSMUSG00000034525.8_0	chr13	-	7639	19	FSM	ENSMUSG00000034525.8	ENSMUST00000043493.7	7667	19	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGCCATACACACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70785736	70736826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_70737932_70740691_70740791_70742943_70743051_70744273_70744465_70747168_70747330_70749186_70749356_70750297_70754996_70756894_70757296_70758652_70758740_70763051_70763109_70763192_70763233_70763452_70763536_70765215_70765254_70767103_70767181_70768776_70768889_70769556_70769576_70772041_70772077_70772526_70772586_70785635
ENSMUSG00000034532.10_0	chr14	+	3774	8	FSM	ENSMUSG00000034532.10	ENSMUST00000224629.2	3781	8	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCTGTCTATTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	65504070	65561417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_65504233_65508148_65508285_65524580_65524617_65531232_65531440_65532841_65533007_65536634_65536865_65540548_65540652_65558682
ENSMUSG00000034532.10_2	chr14	+	684	4	FSM	ENSMUSG00000034532.10	ENST00000346498.6	695	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGCTCTTCAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	65508180	65536842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_65508285_65531232_65531440_65532841_65533007_65536634
ENSMUSG00000034532.10_8	chr14	+	583	3	ISM	ENSMUSG00000034532.10	ENST00000346498.6	695	4	23056	4	23056	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGAGCTCTTCAGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	65531229	65536842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_65531440_65532841_65533007_65536634
ENSMUSG00000034533.11_0	chr9	-	6014	27	FSM	ENSMUSG00000034533.11	ENST00000449082.3	6034	27	13	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTGAATAGGGATATCC	NA	NA	NA	NA	NA	NA	NA	NA	119523413	119437872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462948_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499081_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509_119520629_119523121
ENSMUSG00000034533.11_5	chr9	-	5851	27	FSM	ENSMUSG00000034533.11	ENST00000643924.1	5869	27	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCACTGCTAAGGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	119523412	119438031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119439208_119442586_119442858_119445765_119445867_119446738_119446881_119447909_119447964_119451829_119452115_119453086_119453210_119456136_119456311_119459150_119459306_119460520_119460645_119462806_119462945_119464508_119464962_119467501_119467862_119477103_119477278_119479911_119480151_119487468_119487581_119490188_119490483_119493846_119494018_119494952_119495151_119495431_119495574_119499019_119499081_119499408_119499601_119500586_119500679_119501183_119501313_119516945_119517027_119520509_119520629_119523121
ENSMUSG00000034543.16_0	chr11	+	5639	26	FSM	ENSMUSG00000034543.16	ENSMUST00000096441.5	5656	26	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCCTGCGTTCAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	3599204	3640474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ENSMUSG00000034543.16_5	chr11	+	5075	27	FSM	ENSMUSG00000034543.16	ENSMUST00000093389.9	5085	27	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAATTTGGCCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	3599497	3640364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3600147_3600307_3600448_3608671_3608726_3611828_3611864_3618770_3618840_3619328_3619420_3622265_3622375_3625827_3625988_3626103_3626216_3626641_3626768_3627402_3627483_3628226_3628310_3628535_3628622_3629655_3629797_3629879_3630035_3630174_3630304_3630782_3630889_3631674_3631808_3633544_3633617_3633698_3634077_3634613_3634746_3634837_3634893_3635384_3635527_3635657_3635883_3635975_3636070_3638110_3638300_3639034
ENSMUSG00000034544.18_0	chr3	+	1376	10	FSM	ENSMUSG00000034544.18	ENSMUST00000162036.8	1406	10	17	13	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGTAAAAAATATTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	66888739	67263879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_66888876_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_1	chr3	+	3211	10	FSM	ENSMUSG00000034544.18	ENSMUST00000065074.14	3224	10	8	5	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	66893012	67265723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_66893140_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034544.18_7	chr3	+	3197	10	FSM	ENSMUSG00000034544.18	ENSMUST00000161726.2	3213	10	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACACTGTGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	66893309	67265723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_66893423_66901849_66902046_66903797_66903924_66989868_66990043_67088161_67088199_67113758_67113811_67197679_67197749_67257241_67257349_67262806_67262960_67263553
ENSMUSG00000034557.15_0	chr4	-	6448	19	FSM	ENSMUSG00000034557.15	ENSMUST00000106657.8	6459	19	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACACTCAACTTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	108637995	108494673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108496618_108499284_108499462_108501532_108501639_108507380_108507544_108514123_108514205_108517761_108517913_108531649_108531755_108534906_108534990_108538098_108538324_108539330_108539487_108542105_108542229_108546345_108546467_108548818_108548989_108550516_108550694_108552965_108553066_108574985_108577010_108581003_108581110_108584652_108584743_108637649
ENSMUSG00000034560.7_0	chr10	+	5830	33	FSM	ENSMUSG00000034560.7	ENSMUST00000038388.7	5858	33	14	14	14	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATAAATATAATTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	83379818	83432323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_33	chr10	+	3545	33	FSM	ENSMUSG00000034560.7	ENST00000620430.5	3555	33	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGATGGTGTGCAGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	83379879	83430096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400405_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034
ENSMUSG00000034560.7_7	chr10	+	5606	34	FSM	ENSMUSG00000034560.7	ENST00000332180.10	5626	34	9	11	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATTTCAAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	83379848	83432329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83379967_83382648_83382789_83385325_83385380_83385462_83385529_83386127_83386174_83386744_83386813_83390597_83390681_83391436_83391480_83391876_83391981_83392666_83392788_83394461_83394586_83394681_83394810_83396229_83396391_83400274_83400402_83405831_83405958_83407216_83407325_83407956_83408104_83408221_83408302_83409639_83409746_83410306_83410424_83411880_83412050_83412538_83412694_83415345_83415421_83416120_83416226_83417120_83417256_83419118_83419228_83421681_83421749_83422497_83422585_83424020_83424169_83426154_83426252_83426850_83427048_83427552_83427653_83430034_83431755_83431954
ENSMUSG00000034563.17_0	chr9	+	3128	9	FSM	ENSMUSG00000034563.17	ENSMUST00000037977.15	3151	9	12	11	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCAAGGAATTCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72892722	72923611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920275_72922613
ENSMUSG00000034563.17_1	chr9	+	2922	8	FSM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAATGAGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	72892867	72921211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_2	chr9	+	2955	9	FSM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAACTAAAGGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72892888	72923270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72892956_72904683_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
ENSMUSG00000034563.17_4	chr9	+	2835	7	ISM	ENSMUSG00000034563.17	ENSMUST00000150826.9	2939	8	11823	9	11796	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATAATGAGACTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	72904682	72921211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000034563.17_5	chr9	+	2888	8	ISM	ENSMUSG00000034563.17	ENSMUST00000085350.11	2969	9	11797	12	11797	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAAACTAAAGGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72904683	72923270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_72904753_72906305_72906427_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211_72920609_72922613
ENSMUSG00000034566.11_0	chr11	-	622	6	FSM	ENSMUSG00000034566.11	ENSMUST00000043931.9	625	6	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGTCTCTGAGTAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	115310786	115306515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211_115309343_115310717
ENSMUSG00000034566.11_2	chr11	-	552	5	FSM	ENSMUSG00000034566.11	ENSMUST00000180072.8	486	5	-8	-58	-8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGTCTCTGAGTAGATAAA	NA	NA	NA	NA	NA	NA	NA	NA	115309341	115306515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115306706_115306840_115306904_115307678_115307751_115308664_115308762_115309211
ENSMUSG00000034573.15_0	chr5	+	7909	48	FSM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTTGTACCTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103573366	103746163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_103573403_103609999_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ENSMUSG00000034573.15_7	chr5	+	7853	47	ISM	ENSMUSG00000034573.15	ENSMUST00000048957.11	7915	48	36653	6	36653	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTTTGTACCTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103610019	103746163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_103610120_103624812_103624992_103634570_103634637_103637473_103637660_103640088_103640177_103649232_103649779_103664193_103664290_103665353_103665436_103671432_103671656_103673619_103673695_103673799_103673981_103674861_103675016_103676629_103676769_103677513_103677667_103681084_103681268_103684579_103684743_103688837_103689253_103689387_103689483_103691273_103691331_103698090_103698181_103698614_103698723_103698912_103699045_103702561_103703020_103703953_103704086_103705744_103705839_103707002_103707089_103707736_103707900_103709797_103710013_103710140_103710240_103711876_103712206_103712980_103713156_103715891_103716051_103717295_103717468_103717563_103717775_103720955_103721024_103722944_103723007_103726738_103726833_103727563_103727702_103728535_103728619_103730604_103730643_103734571_103734676_103735908_103736058_103737723_103737815_103738881_103739220_103741372_103741589_103742482_103742546_103745558
ENSMUSG00000034574.11_0	chr12	+	5779	25	FSM	ENSMUSG00000034574.11	ENST00000360909.8	5789	25	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71877877	72039104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71877971_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ENSMUSG00000034574.11_10	chr12	+	5873	26	FSM	ENSMUSG00000034574.11	ENSMUST00000085299.4	5879	26	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTGTACAGATCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	71877936	72039095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71878106_71942500_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72005520_72005548_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ENSMUSG00000034574.11_15	chr12	+	5689	24	ISM	ENSMUSG00000034574.11	ENSMUST00000221317.2	5790	25	5994	-5	5994	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATCTGTTTTCTATGCA	NA	NA	NA	NA	NA	NA	NA	NA	71942497	72039104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_71942721_71962472_71962563_71983332_71983405_71988946_71989042_71990827_71991162_71991957_71992069_71992171_71992276_71993001_71993069_71993288_71993407_71993772_71993912_71994166_71994226_71997967_71998156_71998606_71998907_71999225_71999334_72006579_72006687_72017867_72017953_72021963_72022071_72023569_72023659_72024416_72024586_72027527_72027636_72029466_72029528_72032456_72032589_72035659_72035831_72036452
ENSMUSG00000034575.14_0	chr13	-	3987	13	FSM	ENSMUSG00000034575.14	ENSMUST00000044081.9	3994	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTAGATACTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	69681983	69646087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_69648230_69648591_69648757_69650309_69650469_69651024_69651198_69651753_69651855_69652724_69652852_69655034_69655249_69657681_69657811_69658738_69658847_69661008_69661130_69663083_69663131_69663898_69664023_69681606
ENSMUSG00000034579.18_0	chr11	+	1926	7	FSM	ENSMUSG00000034579.18	ENST00000215885.4	1949	7	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAGATAGAAAAGGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	3438215	3443454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3438854_3439761_3439895_3440142_3440278_3440806_3441091_3441891_3442022_3442125_3442247_3442969
ENSMUSG00000034586.15_0	chr11	-	3224	19	FSM	ENSMUSG00000034586.15	ENSMUST00000044152.13	3236	19	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTTGTGTCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	115258536	115238535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250635_115251147_115251319_115252464_115252615_115258369
ENSMUSG00000034586.15_1	chr11	-	3256	19	FSM	ENSMUSG00000034586.15	ENSMUST00000106542.9	3276	19	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGTTGTGTCTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	115258565	115238535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115239359_115239625_115239785_115239911_115240004_115240747_115240829_115241317_115241425_115241744_115241973_115243410_115243576_115245225_115245305_115245411_115245564_115245850_115245942_115246119_115246261_115247190_115247248_115247445_115247669_115249495_115249613_115249802_115249910_115250520_115250638_115251147_115251319_115252464_115252615_115258369
ENSMUSG00000034587.9_0	chr11	+	1665	2	FSM	ENSMUSG00000034587.9	ENSMUST00000146456.2	1675	2	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGCATATATAAGGACT	NA	NA	NA	NA	NA	NA	NA	NA	3402474	3408331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3402571_3406762
ENSMUSG00000034587.9_1	chr11	+	961	4	FSM	ENSMUSG00000034587.9	ENSMUST00000142397.2	968	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATTGTGAAAAAAAATATC	NA	NA	NA	NA	NA	NA	NA	NA	3402471	3429824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3402741_3421331_3421587_3429259_3429514_3429641
ENSMUSG00000034591.6_0	chr10	-	4716	11	FSM	ENSMUSG00000034591.6	ENSMUST00000039956.6	4742	11	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAAGCATTTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83173730	83066721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_83069615_83090646_83090796_83091874_83092007_83117233_83117314_83119585_83119734_83133017_83133165_83137025_83137171_83140167_83140240_83149278_83149387_83151918_83152654_83173623
ENSMUSG00000034593.17_0	chr9	+	11676	40	NIC	ENSMUSG00000034593.17	novel	11702	41	NA	NA	0	-17	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGGATATAAAGAAACGT	NA	NA	NA	NA	NA	NA	NA	NA	74978469	75130953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75101220_75101420_75103407_75103483_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ENSMUSG00000034593.17_12	chr9	+	6343	40	NIC	ENSMUSG00000034593.17	novel	6372	41	NA	NA	19	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCGTGTAGATGCCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	74978686	75125831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_74978942_75023467_75023579_75027954_75028127_75030192_75030338_75037253_75037411_75043624_75043769_75047929_75048012_75048716_75048825_75051354_75051462_75054146_75054413_75055137_75055220_75059174_75059316_75061037_75061164_75063463_75063548_75067699_75067862_75068713_75068812_75071411_75071499_75071577_75071687_75074300_75074513_75076206_75076364_75078820_75079061_75081233_75081483_75083799_75083894_75087305_75087455_75089180_75089295_75091559_75091704_75091919_75091974_75093176_75093405_75097181_75097283_75099665_75099747_75101220_75101420_75104924_75105019_75108553_75108701_75110989_75111145_75116495_75116586_75118299_75118451_75120073_75120357_75122366_75122542_75124780_75124862_75125122
ENSMUSG00000034595.18_0	chr17	+	2723	4	FSM	ENSMUSG00000034595.18	ENSMUST00000122899.8	2743	4	13	7	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTTGCTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36176960	36186481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36177121_36178121_36179678_36184617_36184832_36185688
ENSMUSG00000034595.18_1	chr17	+	3142	3	FSM	ENSMUSG00000034595.18	ENSMUST00000113814.11	3131	3	-9	-2	-9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTCTTGCTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	36177542	36186481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36179678_36184617_36184832_36185688
ENSMUSG00000034601.18_0	chr12	+	5744	30	FSM	ENSMUSG00000034601.18	ENSMUST00000149564.8	5763	30	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAACTAAGTCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	71183629	71290066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71184813_71186428_71186503_71187638_71187709_71188823_71188894_71195017_71195193_71197016_71197239_71199423_71199572_71201535_71201698_71203820_71203945_71205601_71205732_71206964_71207183_71207897_71207971_71209349_71209575_71211157_71211333_71213839_71214035_71217292_71217481_71219902_71220014_71222696_71222778_71224602_71224797_71225813_71225933_71231196_71231397_71234154_71234312_71235361_71235582_71236180_71236429_71237668_71237740_71240040_71240164_71241065_71241241_71262815_71262971_71265964_71266074_71289717
ENSMUSG00000034602.16_0	chr10	-	9289	35	NIC	ENSMUSG00000034602.16	novel	9301	36	NA	NA	8	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAGAGTGGTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	122912402	122827965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122845817_122845836_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUSG00000034602.16_5	chr10	-	5511	34	FSM	ENSMUSG00000034602.16	ENSMUST00000037557.9	5511	34	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAAATGATATT	NA	NA	NA	NA	NA	NA	NA	NA	122911930	122831253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867027_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUSG00000034602.16_8	chr10	-	5297	34	FSM	ENSMUSG00000034602.16	ENSMUST00000170935.9	5302	34	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAATTAAAGTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	122911925	122831465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_122831739_122835563_122835647_122838600_122838809_122841916_122842041_122842876_122842938_122844040_122844232_122845407_122845537_122846398_122846543_122849272_122849896_122850845_122851045_122852167_122852462_122853979_122854143_122856208_122856385_122858738_122858850_122859814_122859917_122861984_122862076_122862158_122862233_122862311_122862393_122862813_122862919_122865037_122865151_122866014_122866200_122866944_122867030_122868427_122868655_122870209_122870364_122871372_122871510_122871916_122872042_122874365_122874561_122878135_122878262_122878879_122878975_122882202_122882333_122887541_122887674_122888089_122888218_122895092_122895157_122911756
ENSMUSG00000034610.15_0	chr4	+	6026	31	FSM	ENSMUSG00000034610.15	ENSMUST00000043368.12	6054	31	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTCAAATTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	108316644	108416606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108316837_108317213_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406437_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415911
ENSMUSG00000034610.15_4	chr4	+	5843	30	FSM	ENSMUSG00000034610.15	ENSMUST00000097925.9	5865	30	10	12	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAGTCAAATTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	108317216	108416606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108317398_108336069_108336939_108343650_108343815_108348544_108348662_108352346_108352525_108354163_108354253_108356543_108356596_108360162_108360233_108363020_108363148_108365103_108365224_108365417_108365631_108369232_108369408_108370068_108370764_108374579_108374731_108377403_108377491_108380400_108380505_108383964_108384023_108384112_108384217_108386413_108386504_108388032_108388147_108399207_108399286_108399462_108399641_108399858_108399907_108399990_108400074_108405251_108405368_108406422_108406611_108407909_108408011_108412578_108413027_108414518_108414672_108415914
ENSMUSG00000034612.8_0	chr10	+	571	2	FSM	ENSMUSG00000034612.8	ENST00000546689.1	589	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAGGACCCCGGTCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	82821314	82927986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82821802_82927902
ENSMUSG00000034614.15_0	chr11	+	2562	6	FSM	ENSMUSG00000034614.15	ENSMUST00000045153.11	2573	6	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTTGTGGTGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	3280410	3292970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3281005_3281914_3282032_3282108_3282229_3283208_3283413_3283504_3283584_3291522
ENSMUSG00000034614.15_2	chr11	+	1518	5	FSM	ENSMUSG00000034614.15	ENST00000441972.5	1535	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGTGAAGGACCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	3280754	3292345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3281005_3281914_3282036_3282108_3282229_3283208_3283413_3291522
ENSMUSG00000034617.8_0	chr13	-	3678	15	FSM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATATCAAGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	68730237	68708909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669_68728835_68730183
ENSMUSG00000034617.8_1	chr13	-	3622	14	ISM	ENSMUSG00000034617.8	ENSMUST00000045827.5	3692	15	1405	14	1388	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATATAATATCAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	68728835	68708912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_68710552_68712438_68712622_68712718_68712812_68713228_68713348_68714186_68714374_68715060_68715104_68716890_68717072_68718122_68718212_68719188_68719343_68720696_68720820_68723136_68723510_68725706_68725825_68727661_68727816_68728669
ENSMUSG00000034620.18_0	chr10	-	4775	6	FSM	ENSMUSG00000034620.18	ENSMUST00000140299.3	4793	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGATTGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121933264	121914024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121917595_121924783_121924955_121926364_121926680_121930494_121930598_121931843_121932000_121932804
ENSMUSG00000034621.15_0	chr11	-	6862	8	FSM	ENSMUSG00000034621.15	ENSMUST00000143842.2	6871	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTAGTGGAGTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	102447019	102366743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102372914_102378325_102378457_102391628_102391773_102398268_102398356_102398969_102399038_102418919_102418993_102429107_102429183_102446905
ENSMUSG00000034634.8_0	chr15	-	736	3	FSM	ENSMUSG00000034634.8	ENSMUST00000040404.8	744	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATACTGTGGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	74635468	74633911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74634438_74634599_74634699_74635357
ENSMUSG00000034636.10_0	chr4	-	2198	13	FSM	ENSMUSG00000034636.10	ENST00000545132.5	2213	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTACCAAAAGTAGAACTA	NA	NA	NA	NA	NA	NA	NA	NA	108158233	108094536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108094637_108099017_108099071_108099196_108099395_108101886_108101971_108102072_108102235_108107691_108107743_108107970_108108071_108109348_108109414_108112397_108112575_108117146_108117288_108123014_108123770_108129414_108129581_108158087
ENSMUSG00000034640.10_0	chr3	+	4177	6	FSM	ENSMUSG00000034640.10	ENSMUST00000047906.10	4191	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGATTTCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	65435838	65462933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_65436054_65438644_65439606_65453627_65453797_65454945_65455107_65459956_65460233_65460538
ENSMUSG00000034645.15_0	chr4	-	1246	11	FSM	ENSMUSG00000034645.15	ENST00000612017.4	1265	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAACCGTATGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	108067409	108040854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108040943_108041629_108041692_108044436_108044632_108046643_108046689_108046765_108046928_108049106_108049161_108049248_108049349_108051179_108051245_108053340_108053518_108058389_108058531_108067252
ENSMUSG00000034647.16_0	chr17	-	10801	13	FSM	ENSMUSG00000034647.16	ENSMUST00000038116.13	10821	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGAATCTGCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	66384055	66272699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66277333_66279291_66279388_66283015_66283160_66286496_66286596_66289830_66294489_66331070_66331219_66334246_66334390_66338365_66338567_66344487_66344635_66349527_66349597_66356780_66356929_66359948_66360087_66383878
ENSMUSG00000034648.10_0	chr6	+	3683	2	FSM	ENSMUSG00000034648.10	ENSMUST00000049285.10	3700	2	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACACTTGCAATAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	107506741	107547171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_107507205_107543951
ENSMUSG00000034653.12_0	chr18	+	7195	30	FSM	ENSMUSG00000034653.12	ENSMUST00000037763.11	7215	30	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAATGAAATACTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	44960819	45022771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44961986_44963218_44963310_44966088_44966286_44967525_44967726_44970407_44970575_44973251_44973355_44974329_44974487_44977352_44977461_44978746_44978896_44980810_44980947_44983374_44983502_44983702_44983769_44987669_44987849_44988058_44988156_44988237_44988326_44988410_44988492_44990075_44990159_44991254_44991361_44992997_44993118_44993443_44993717_44995671_44995799_44997331_44997538_44997927_44998124_45004516_45004627_45005907_45006201_45010684_45010863_45018189_45018394_45019306_45019490_45020674_45020763_45020855
ENSMUSG00000034659.15_0	chr19	-	2170	4	FSM	ENSMUSG00000034659.15	ENSMUST00000038128.15	2188	4	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAAAGTCTCTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	10859355	10848031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10849514_10849950_10850054_10851605_10851851_10859015
ENSMUSG00000034663.14_0	chr5	+	7375	16	FSM	ENSMUSG00000034663.14	ENSMUST00000035635.10	7387	16	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCAATGTCTTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97145555	97239722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212873_97216257_97216416_97222491_97222603_97234601
ENSMUSG00000034663.14_1	chr5	+	7372	16	NNC	ENSMUSG00000034663.14	novel	7387	16	NA	NA	10	-4	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCAATGTCTTTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97145557	97239722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212877_97216262_97216416_97222491_97222603_97234601
ENSMUSG00000034663.14_2	chr5	+	7368	16	NNC	ENSMUSG00000034663.14	novel	7387	16	NA	NA	12	-11	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTATAATCAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	97145559	97239715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_97145956_97175689_97175809_97178995_97179102_97184754_97184898_97186279_97186402_97188531_97188614_97192893_97193027_97200955_97201060_97202710_97202791_97204724_97204886_97209264_97209516_97211303_97211403_97212687_97212877_97216257_97216416_97222491_97222603_97234601
ENSMUSG00000034664.14_0	chr11	-	3432	30	FSM	ENSMUSG00000034664.14	ENSMUST00000103086.4	3437	30	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCTTGGGGTCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	102360707	102344125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102344344_102346389_102346507_102346724_102346827_102347055_102347173_102347790_102347911_102348010_102348155_102348285_102348386_102348597_102348679_102348938_102349019_102349167_102349261_102350698_102350847_102350963_102351032_102351341_102351468_102351574_102351727_102351815_102351872_102351954_102352060_102352143_102352190_102352462_102352646_102355765_102355978_102356130_102356184_102356322_102356377_102356536_102356581_102356715_102356764_102357082_102357212_102357302_102357349_102357879_102357930_102358152_102358316_102358418_102358517_102358605_102358728_102360350
ENSMUSG00000034667.9_0	chr10	-	5987	25	FSM	ENSMUSG00000034667.9	ENSMUST00000218004.2	6005	25	13	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTCATTGGAGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	121462224	121423289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_121426126_121429571_121429629_121432088_121432161_121435491_121435540_121436696_121436813_121437147_121437265_121438135_121438326_121438933_121439220_121440250_121440490_121441486_121441557_121442145_121442241_121442625_121442746_121442903_121443049_121443415_121443541_121445028_121445092_121445601_121445641_121447380_121447618_121449127_121449297_121449391_121449577_121450909_121451129_121452519_121452590_121453036_121453094_121454997_121455081_121458762_121458897_121462009
ENSMUSG00000034673.15_0	chr17	+	3062	9	FSM	ENSMUSG00000034673.15	ENSMUST00000038149.13	3068	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAGTTGAGATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34811242	34816374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34811749_34812545_34812620_34812840_34813089_34813211_34813403_34813555_34813692_34813774_34813929_34814238_34814328_34814601_34814689_34814797
ENSMUSG00000034674.19_0	chr10	+	2941	10	FSM	ENSMUSG00000034674.19	ENSMUST00000092266.11	2959	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGGCTATGCTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	82465670	82486149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82465774_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034674.19_2	chr10	+	3489	10	FSM	ENSMUSG00000034674.19	ENSMUST00000151390.8	3502	10	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCCGGCTAACTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	82465702	82486630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82465873_82474534_82474711_82477149_82477392_82477854_82477925_82480003_82480140_82480284_82480368_82480448_82480544_82483055_82483228_82483786_82483913_82484411
ENSMUSG00000034675.18_0	chr13	-	2924	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109923.9	2940	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCCTTCGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55635914	55621247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUSG00000034675.18_15	chr13	-	2373	14	FSM	ENSMUSG00000034675.18	ENSMUST00000109921.9	2378	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAGATTGTAGCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	55635874	55621761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55622107_55622268_55622375_55622672_55623350_55623958_55624130_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUSG00000034675.18_7	chr13	-	3067	15	FSM	ENSMUSG00000034675.18	ENSMUST00000021950.15	3078	15	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCCCTTCGGGCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	55635919	55621247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55622107_55622268_55622372_55622672_55623350_55623958_55624130_55624448_55624587_55625363_55625494_55625589_55625650_55629161_55629226_55629351_55629504_55629725_55629804_55629963_55630111_55630225_55630301_55630504_55630618_55631199_55631256_55635675
ENSMUSG00000034681.18_0	chr17	+	1633	7	FSM	ENSMUSG00000034681.18	ENSMUST00000115371.9	1646	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCAAATTGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24633625	24644862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24633709_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_12	chr17	+	1847	8	ISM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	372	7	-155	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCAAATTGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24634020	24644862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_15	chr17	+	1379	8	FSM	ENSMUSG00000034681.18	ENST00000568631.5	1393	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGAGGGTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	24634183	24644223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24634471_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_17	chr17	+	2036	8	FSM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACCTAGGATTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24634183	24644846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24634505_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_20	chr17	+	1736	7	ISM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	2838	-17	2838	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24637013	24644869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_23	chr17	+	1550	6	ISM	ENSMUSG00000034681.18	ENST00000565678.5	2050	8	3255	-10	3255	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCAAATTGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24637430	24644862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_3	chr17	+	1805	8	FSM	ENSMUSG00000034681.18	ENSMUST00000088512.13	1816	8	5	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGAGTGCTGGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	24633641	24644869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24633709_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034681.18_6	chr17	+	1912	9	FSM	ENSMUSG00000034681.18	ENSMUST00000163717.2	1920	9	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGCAAATTGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	24633649	24644862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24633709_24634014_24634137_24637011_24637193_24637430_24637587_24639179_24639372_24640722_24640826_24641123_24641278_24643375_24643518_24644059
ENSMUSG00000034683.13_0	chr2	+	1011	6	FSM	ENSMUSG00000034683.13	ENST00000409137.7	1022	6	8	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTTGAGCTCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79538289	79646649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_79538599_79540242_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034683.13_2	chr2	+	1022	6	FSM	ENSMUSG00000034683.13	ENST00000280295.7	1035	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGTTGAGCTCCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79538299	79646649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_79538599_79540221_79540304_79586797_79586833_79589954_79590016_79638645_79638745_79646203
ENSMUSG00000034684.13_0	chr9	-	3571	19	FSM	ENSMUSG00000034684.13	ENST00000002829.8	3588	19	11	6	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGACTTTGGTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107586856	107558703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107568554_107568648_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107586616
ENSMUSG00000034684.13_1	chr9	-	3383	18	FSM	ENSMUSG00000034684.13	ENSMUST00000080560.9	3395	18	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGACTTTGGTTTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	107587667	107558703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107560039_107560758_107560893_107561171_107561240_107561420_107561579_107561748_107561791_107561886_107561976_107562523_107562747_107564388_107564534_107564688_107564759_107564928_107565044_107565147_107565288_107565428_107565549_107566884_107566979_107569366_107569487_107569587_107569651_107569754_107569916_107582629_107582791_107587522
ENSMUSG00000034686.9_0	chr13	+	1330	3	FSM	ENSMUSG00000034686.9	ENSMUST00000046533.9	1359	3	28	1	28	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCGGAGGGGGATACCA	NA	NA	NA	NA	NA	NA	NA	NA	55612107	55620966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55612228_55619600_55620250_55620405
ENSMUSG00000034706.17_1	chr11	+	1649	11	FSM	ENSMUSG00000034706.17	ENST00000582036.5	1667	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGCCTTGAAGAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	114623747	114645260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114623922_114625353_114625516_114626690_114626813_114629441_114629585_114631242_114631357_114635126_114635267_114635880_114636004_114641163_114641388_114642611_114642748_114643718_114643830_114645060
ENSMUSG00000034707.8_0	chr10	+	3846	14	FSM	ENSMUSG00000034707.8	ENSMUST00000040344.7	3855	14	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCAATGTGTCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121201003	121233150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_121201264_121207048_121207109_121210262_121210470_121212112_121212179_121212540_121212640_121213926_121214095_121216022_121216106_121217077_121217197_121219244_121219349_121224005_121224108_121226528_121226637_121227275_121227387_121228585_121228747_121230952
ENSMUSG00000034708.13_0	chr11	+	2324	13	FSM	ENSMUSG00000034708.13	ENSMUST00000049460.12	2331	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTATCTGATTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	102321154	102327633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102321367_102323790_102323936_102324050_102324177_102324311_102324397_102324761_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326071_102326318_102326534_102326769_102326849_102327075_102327160
ENSMUSG00000034708.13_7	chr11	+	784	6	FSM	ENSMUSG00000034708.13	ENST00000639447.1	796	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTAAAGGTCAGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	102324772	102327066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102324872_102324967_102325104_102325225_102325336_102325528_102325653_102325884_102325983_102326849
ENSMUSG00000034709.9_0	chr17	+	2870	21	FSM	ENSMUSG00000034709.9	ENST00000281394.8	2887	21	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTATTGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	88837531	88895543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034709.9_34	chr17	+	3131	22	FSM	ENSMUSG00000034709.9	ENSMUST00000038551.8	3141	22	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGAACTTTTCGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88837548	88895788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88882619_88882713_88884565_88884809_88886209_88886243_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034709.9_7	chr17	+	2778	20	FSM	ENSMUSG00000034709.9	ENST00000449090.6	2794	20	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGTATTGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	88837530	88895543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88837747_88850272_88850342_88852748_88852896_88854995_88855098_88856921_88857087_88857218_88857278_88858089_88858185_88862277_88862331_88863009_88863160_88866016_88866119_88866204_88866294_88869536_88869674_88873068_88873162_88876507_88876636_88880030_88880184_88884565_88884809_88887862_88887980_88889842_88889942_88891280_88891410_88895111
ENSMUSG00000034714.10_0	chr11	+	3477	14	FSM	ENSMUSG00000034714.10	ENSMUST00000045779.6	3486	14	7	2	7	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTGCAGCTGAGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	114566263	114611801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114566499_114577219_114577393_114581064_114581177_114587414_114587636_114592606_114592703_114593061_114593135_114598161_114598232_114598504_114598561_114599242_114599336_114599594_114599688_114600868_114601012_114601636_114601823_114602585_114602665_114609954
ENSMUSG00000034723.12_0	chr2	-	5473	8	FSM	ENSMUSG00000034723.12	ENSMUST00000038228.11	5488	8	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACTTCACACTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	134486060	134436114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_134440786_134441929_134441994_134442807_134442910_134451450_134451497_134462474_134462604_134463307_134463354_134481641_134481758_134485761
ENSMUSG00000034724.19_0	chr5	-	8557	12	FSM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGCACACTGGTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	96309849	96218198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309795
ENSMUSG00000034724.19_1	chr5	-	8496	11	ISM	ENSMUSG00000034724.19	ENSMUST00000155901.8	8564	12	27865	7	27422	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGCACACTGGTCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	96281984	96218198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869
ENSMUSG00000034724.19_5	chr5	-	3159	12	FSM	ENSMUSG00000034724.19	ENSMUST00000113005.9	3170	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGGAAAAGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96309614	96223606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_96225252_96227791_96227995_96230728_96230957_96234000_96234153_96239442_96239598_96242019_96242178_96246103_96246173_96254074_96254165_96276801_96276888_96278917_96279105_96281869_96281992_96309550
ENSMUSG00000034729.17_0	chr17	+	1011	7	FSM	ENSMUSG00000034729.17	ENSMUST00000120737.8	1017	7	2	4	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGGCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47679813	47689600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47679880_47683351_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_1	chr17	+	1011	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119945.8	1018	7	1	6	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGGCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47679816	47689600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47679880_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_3	chr17	+	1095	7	FSM	ENSMUSG00000034729.17	ENSMUST00000119841.8	1113	7	14	4	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGGCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47680135	47689600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47680283_47683351_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_4	chr17	+	937	6	ISM	ENSMUSG00000034729.17	ENSMUST00000060752.13	1109	7	3238	3	3238	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGGCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47683359	47689600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_47683417_47683500_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034729.17_5	chr17	+	945	6	ISM	ENSMUSG00000034729.17	ENSMUST00000119841.8	1113	7	3233	4	3233	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCCTGGCTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47683354	47689600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_47683417_47683497_47683571_47685897_47686035_47686858_47686968_47688684_47688775_47689126
ENSMUSG00000034732.5_0	chrX	+	1231	2	FSM	ENSMUSG00000034732.5	ENST00000373105.1	1243	2	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATAAAATTTATCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	118836698	118839076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_118836998_118838144
ENSMUSG00000034738.9_0	chr2	+	1979	16	FSM	ENSMUSG00000034738.9	ENST00000444448.6	1997	16	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAGAATGGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	68966007	69019473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_68966261_68975113_68975200_68982678_68982763_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005614_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802_69015893_69019340
ENSMUSG00000034738.9_22	chr2	+	1259	13	FSM	ENSMUSG00000034738.9	ENST00000397209.6	1276	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAAGACGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	68975121	69015886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_68975200_68986456_68986520_68986716_68986799_68989112_68989176_68991413_68991513_68996225_68996352_69005850_69005950_69006046_69006173_69009728_69009838_69011174_69011264_69013170_69013297_69014224_69014340_69015802
ENSMUSG00000034739.18_0	chr9	+	3977	16	FSM	ENSMUSG00000034739.18	ENST00000619721.6	3995	16	9	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTCCCACTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44013031	44020472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44014990_44015068_44015877_44016027_44016448_44016580_44016683_44016813_44017328_44017457_44017539_44017820_44017889_44018759_44019009_44019269_44019591
ENSMUSG00000034739.18_4	chr9	+	1563	10	FSM	ENSMUSG00000034739.18	ENST00000360167.4	1577	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTCCTCTACCTATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44013058	44017795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44013244_44013330_44013434_44013547_44013662_44013762_44013937_44014078_44014293_44014513_44014645_44014754_44014881_44016448_44016580_44016683_44016813_44017539
ENSMUSG00000034744.14_0	chr6	+	1393	10	FSM	ENSMUSG00000034744.14	ENSMUST00000037376.14	1405	10	11	1	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGTCATCTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	83771974	83779537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83772265_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_1	chr6	+	1316	10	FSM	ENSMUSG00000034744.14	ENSMUST00000113851.8	1323	10	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAGGGTGTCATCTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	83772016	83779536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83772231_83773888_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778479_83778559_83779249
ENSMUSG00000034744.14_3	chr6	+	1069	9	FSM	ENSMUSG00000034744.14	ENST00000443938.6	1081	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTACTCCTTCCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	83773893	83779521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83773974_83774158_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778492_83778559_83779249
ENSMUSG00000034744.14_8	chr6	+	990	8	ISM	ENSMUSG00000034744.14	ENST00000443938.6	1081	9	270	6	270	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTACTCCTTCCCTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	83774157	83779521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_83774258_83774937_83775080_83775525_83775637_83776252_83776366_83777252_83777341_83778072_83778171_83778492_83778559_83779249
ENSMUSG00000034748.17_0	chr10	-	1876	8	FSM	ENSMUSG00000034748.17	ENSMUST00000042923.9	1891	8	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	81463617	81457621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81463305
ENSMUSG00000034748.17_1	chr10	-	1664	9	FSM	ENSMUSG00000034748.17	ENSMUST00000119324.8	1667	9	0	3	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTTACATTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	81463154	81457621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81457913_81458241_81458514_81458582_81458707_81459825_81459907_81459980_81460077_81460890_81460951_81461549_81461733_81462323_81462452_81462725
ENSMUSG00000034751.18_0	chr13	-	9880	28	FSM	ENSMUSG00000034751.18	ENSMUST00000239261.2	9905	28	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGAAAGATGACTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	103233334	102869004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_102875406_102875705_102875888_102878453_102878591_102887021_102887145_102887888_102888119_102890563_102890765_102895009_102895246_102895530_102895659_102897467_102897581_102897802_102897926_102904378_102904481_102906276_102906443_102907230_102907364_102908962_102909102_102910693_102910903_102917667_102917754_102919852_102919921_102923824_102923958_102925470_102925573_102930476_102930687_102932593_102932670_102934553_102934712_102941149_102941229_102947008_102947079_102990338_102990428_103162029_103162062_103194348_103194424_103233255
ENSMUSG00000034751.18_1	chr13	-	10609	29	FSM	ENSMUSG00000034751.18	ENSMUST00000167058.8	10636	29	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGCATGAAAGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	103470951	102869008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_102875406_102875705_102875888_102878453_102878591_102887021_102887145_102887888_102888119_102890563_102890765_102895009_102895246_102895530_102895659_102897467_102897581_102897802_102897926_102904378_102904481_102906276_102906443_102907230_102907364_102908962_102909102_102910693_102910903_102917667_102917754_102919852_102919921_102923824_102923958_102925470_102925573_102930476_102930687_102932593_102932670_102934553_102934712_102941149_102941229_102947008_102947079_102990338_102990428_103162029_103162062_103276670_103276796_103307910_103308065_103470343
ENSMUSG00000034751.18_2	chr13	-	9804	27	ISM	ENSMUSG00000034751.18	ENSMUST00000239261.2	9905	28	38930	3	38930	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAGATGACTTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	103194423	102869001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_102875406_102875705_102875888_102878453_102878591_102887021_102887145_102887888_102888119_102890563_102890765_102895009_102895246_102895530_102895659_102897467_102897581_102897802_102897926_102904378_102904481_102906276_102906443_102907230_102907364_102908962_102909102_102910693_102910903_102917667_102917754_102919852_102919921_102923824_102923958_102925470_102925573_102930476_102930687_102932593_102932670_102934553_102934712_102941149_102941229_102947008_102947079_102990338_102990428_103162029_103162062_103194348
ENSMUSG00000034757.16_0	chr11	+	1929	4	FSM	ENSMUSG00000034757.16	ENSMUST00000036376.13	1939	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	102175765	102180062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102175915_102176489_102176545_102178133_102178698_102178901
ENSMUSG00000034757.16_2	chr11	+	2266	3	FSM	ENSMUSG00000034757.16	ENST00000319511.6	2282	3	9	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCCCTCCCCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	102176022	102179999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102176545_102178051_102178698_102178901
ENSMUSG00000034757.16_3	chr11	+	2240	3	FSM	ENSMUSG00000034757.16	ENSMUST00000156326.2	2249	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGCCTCTTTGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	102176029	102180062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102176545_102178133_102178698_102178901
ENSMUSG00000034757.16_5	chr11	+	697	2	FSM	ENSMUSG00000034757.16	ENST00000589856.1	702	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGGAGAGAGGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102176499	102178703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102176545_102178051
ENSMUSG00000034757.16_6	chr11	+	647	1	NIC	ENSMUSG00000034757.16	novel	1939	4	NA	NA	-3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	159	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGGAGAGAGGCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102178056	102178703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_102178100_102178700
ENSMUSG00000034757.16_7	chr11	+	1376	2	FSM	ENSMUSG00000034757.16	ENST00000590235.5	1383	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGCCCTCCCCTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	102178130	102179999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102178409_102178901
ENSMUSG00000034758.13_2	chr10	-	1944	14	FSM	ENSMUSG00000034758.13	ENSMUST00000142948.8	1961	14	9	8	-9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCAGAGATTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	81436700	81426745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431210_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUSG00000034758.13_3	chr10	-	1990	14	FSM	ENSMUSG00000034758.13	ENSMUST00000072020.9	2015	14	18	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGCAGAGATTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	81436716	81426745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81426974_81427093_81427171_81427719_81427874_81428546_81428689_81429828_81430077_81430160_81430420_81431041_81431080_81431156_81431240_81431313_81431390_81431678_81432090_81434444_81434491_81434910_81434973_81435868_81435950_81436631
ENSMUSG00000034761.16_1	chr12	-	4317	31	FSM	ENSMUSG00000034761.16	ENST00000013125.9	4342	31	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGCAAATGAACTATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	69939814	69850541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69852126_69853971_69854028_69855985_69856057_69858047_69858141_69859909_69859979_69862528_69862707_69863063_69863168_69864795_69864855_69865157_69865273_69869576_69869638_69870195_69870276_69871353_69871439_69872515_69872558_69873064_69873163_69874135_69874293_69874797_69874841_69877202_69877271_69878325_69878385_69884768_69884848_69888693_69888811_69889661_69889744_69891129_69891193_69892454_69892587_69896320_69896394_69897599_69897643_69897727_69897776_69899472_69899529_69903054_69903120_69903546_69903638_69921050_69921109_69939426
ENSMUSG00000034765.7_0	chr19	+	2447	4	FSM	ENSMUSG00000034765.7	ENSMUST00000038287.7	2473	4	5	21	5	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53517544	53530841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53518128_53522256_53522406_53525887_53526108_53529346
ENSMUSG00000034771.16_0	chr10	+	2735	20	FSM	ENSMUSG00000034771.16	ENSMUST00000135211.8	2746	20	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTCTTTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	81411099	81426300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81411526_81411638_81411737_81412069_81412134_81412431_81412477_81413462_81413526_81416090_81416133_81416317_81416502_81416728_81416749_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ENSMUSG00000034771.16_11	chr10	+	1908	16	ISM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	429	6	429	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCTGCTGCCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	81412066	81426165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_81412134_81412431_81412477_81413462_81413526_81416090_81416166_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ENSMUSG00000034771.16_2	chr10	+	1999	17	FSM	ENSMUSG00000034771.16	ENST00000443826.7	2010	17	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATCTGCTGCCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	81411642	81426165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81411737_81412069_81412134_81412431_81412477_81413462_81413526_81416090_81416166_81417478_81417590_81418246_81418292_81418570_81418721_81420436_81420576_81422046_81422208_81422691_81422763_81422925_81423176_81423386_81423635_81423707_81423856_81424642_81424794_81425253_81425331_81426058
ENSMUSG00000034773.17_0	chr11	+	2537	10	FSM	ENSMUSG00000034773.17	ENSMUST00000100392.5	2547	10	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCGTCCCACACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	102139716	102156012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102139919_102141504_102141556_102145779_102146848_102148712_102148797_102150145_102150287_102150659_102150769_102150904_102150991_102151316_102151443_102153008_102153127_102155460
ENSMUSG00000034773.17_1	chr11	+	1897	5	FSM	ENSMUSG00000034773.17	ENST00000245382.6	1925	5	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCGTCCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	102145796	102155985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102146848_102150659_102150769_102150904_102150991_102151316_102151443_102155460
ENSMUSG00000034773.17_2	chr11	+	1506	6	NIC	ENSMUSG00000034773.17	novel	1529	7	NA	NA	6	-9	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCGTCCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	102145783	102155985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_102146848_102148712_102148797_102150145_102150287_102150656_102150769_102150904_102150991_102155966
ENSMUSG00000034773.17_3	chr11	+	1490	5	ISM	ENSMUSG00000034773.17	ENST00000319977.8	1529	7	3	5004	3	-5004	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGAAGCCCCCTCCACC	NA	NA	NA	NA	NA	NA	NA	NA	102145780	102150990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_102146848_102148712_102148797_102150145_102150287_102150656_102150769_102150904
ENSMUSG00000034777.3_0	chr6	+	1223	3	FSM	ENSMUSG00000034777.3	ENSMUST00000037807.3	1242	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAACTCACTCCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83688255	83715286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83688526_83710080_83710269_83714521
ENSMUSG00000034780.7_2	chr2	+	4123	3	FSM	ENSMUSG00000034780.7	ENST00000392690.3	4149	3	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACAGAAGAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	67948211	67953012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_67950829_67951398_67951982_67952089
ENSMUSG00000034781.6_0	chr10	-	3396	7	FSM	ENSMUSG00000034781.6	ENSMUST00000043604.6	3414	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCTGGCTCCTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	81381014	81364565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81366820_81366925_81367080_81367155_81367286_81368229_81368359_81369085_81369241_81370913_81371099_81380625
ENSMUSG00000034785.16_0	chr4	-	715	3	NIC	ENSMUSG00000034785.16	novel	1690	4	NA	NA	3	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACAAACTGTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	107164312	107149382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_107149620_107154793_107154938_107163978
ENSMUSG00000034785.16_1	chr4	-	899	4	FSM	ENSMUSG00000034785.16	ENSMUST00000082426.11	1690	4	70	721	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCACAAACTGTGACAAC	NA	NA	NA	NA	NA	NA	NA	NA	107164296	107149382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107149620_107150945_107151146_107154793_107154938_107163978
ENSMUSG00000034785.16_19	chr4	-	580	3	FSM	ENSMUSG00000034785.16	ENST00000388876.3	596	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTTTGCACTCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	107164306	107149567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_107149620_107150945_107151146_107163978
ENSMUSG00000034786.18_0	chr17	+	1331	4	FSM	ENSMUSG00000034786.18	ENSMUST00000038244.15	1343	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGACTGGTATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	34808790	34810727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34809235_34809434_34809538_34809715_34809916_34810143
ENSMUSG00000034789.9_0	chr13	-	1153	8	FSM	ENSMUSG00000034789.9	ENSMUST00000035242.9	1168	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCTGTGTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	55469748	55467702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55468028_55468124_55468188_55468315_55468367_55468557_55468658_55468739_55468808_55468914_55468994_55469202_55469272_55469350
ENSMUSG00000034793.16_0	chr11	+	1402	7	FSM	ENSMUSG00000034793.16	ENSMUST00000070334.10	1404	7	0	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTTCTTGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	102080445	102084905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102080479_102080696_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034793.16_3	chr11	+	1556	6	FSM	ENSMUSG00000034793.16	ENSMUST00000078975.8	1573	6	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCTTTTCTTGTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	102080509	102084905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102080970_102082860_102082968_102083298_102083390_102083574_102083694_102083910_102084053_102084268
ENSMUSG00000034795.15_0	chr14	+	1695	6	FSM	ENSMUSG00000034795.15	ENSMUST00000048208.10	1721	6	18	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGTATTTTTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	77274229	77349636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_77274412_77305299_77305394_77306276_77306390_77329107_77329507_77330209_77330327_77348846
ENSMUSG00000034795.15_2	chr14	+	1177	4	FSM	ENSMUSG00000034795.15	ENSMUST00000095625.11	1195	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGTATTTTTCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	77274231	77349636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_77274412_77305299_77305394_77306276_77306390_77348846
ENSMUSG00000034799.17_0	chr8	-	10209	42	NIC	ENSMUSG00000034799.17	novel	10255	44	NA	NA	7	-6	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTGTTTAGACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72124373	72077066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_72082368_72083159_72083320_72083597_72083691_72087160_72087309_72087532_72087614_72087813_72087871_72089181_72089212_72090415_72090455_72092343_72092468_72093999_72094153_72094496_72094586_72094772_72094851_72095735_72095820_72097196_72097341_72097516_72097614_72098328_72098456_72098541_72098628_72100544_72100679_72101541_72101677_72102191_72102282_72102497_72102567_72103170_72103322_72103767_72103932_72104596_72104713_72104877_72105048_72105161_72105304_72106031_72106260_72107447_72107668_72107776_72107849_72108306_72108386_72108898_72108946_72110646_72110756_72110899_72111446_72113085_72113294_72114462_72114496_72115124_72115180_72115498_72115573_72115806_72115931_72116802_72116921_72118622_72118723_72119284_72119315_72124269
ENSMUSG00000034800.16_0	chr2	-	1875	5	FSM	ENSMUSG00000034800.16	ENST00000614034.5	1886	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAATTAAGTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	127423446	127418200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127418563_127418643_127419865_127420523_127420638_127422816_127422944_127423395
ENSMUSG00000034800.16_1	chr2	-	1685	3	FSM	ENSMUSG00000034800.16	ENST00000617923.4	1706	3	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAATTAAGTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	127420625	127418200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127418563_127418643_127419865_127420523
ENSMUSG00000034800.16_2	chr2	-	1816	4	ISM	ENSMUSG00000034800.16	ENST00000614034.5	1886	5	511	11	493	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAATTAAGTACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	127422935	127418200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_127418563_127418643_127419865_127420523_127420638_127422816
ENSMUSG00000034800.16_35	chr2	-	1480	4	FSM	ENSMUSG00000034800.16	ENST00000622059.4	1485	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTATTACAGTTGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	127423446	127418481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127418563_127418643_127419865_127422816_127422944_127423395
ENSMUSG00000034800.16_47	chr2	-	1314	4	FSM	ENSMUSG00000034800.16	ENST00000611147.1	1324	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACAGAGGGGGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127423446	127418881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127419904_127420523_127420638_127422816_127422944_127423395
ENSMUSG00000034800.16_48	chr2	-	1258	3	ISM	ENSMUSG00000034800.16	ENST00000611147.1	1324	4	508	10	490	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACAGAGGGGGAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127422938	127418881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_127419904_127420523_127420638_127422816
ENSMUSG00000034807.10_0	chr8	+	3190	12	FSM	ENSMUSG00000034807.10	ENSMUST00000047903.10	3207	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAAGTCTTTGGGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	72063652	72077549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72064089_72064727_72064839_72065553_72065672_72070193_72070329_72070718_72070924_72072295_72072416_72073244_72073322_72073391_72073499_72074407_72074541_72075346_72075475_72075733_72075941_72076136
ENSMUSG00000034818.18_0	chr10	-	2014	12	FSM	ENSMUSG00000034818.18	ENSMUST00000120508.8	2042	12	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCAATTTCCCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	81318498	81297389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81298176_81298502_81298606_81300173_81300255_81301800_81301864_81302758_81302906_81302989_81303132_81303818_81303966_81305277_81305358_81306462_81306592_81307142_81307192_81312702_81312786_81318294
ENSMUSG00000034820.5_0	chr19	+	3467	10	FSM	ENSMUSG00000034820.5	ENST00000439958.8	3475	10	1	7	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAATCTTTTATACTGC	NA	NA	NA	NA	NA	NA	NA	NA	10502630	10525012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_11	chr19	+	544	5	FSM	ENSMUSG00000034820.5	ENST00000541963.5	549	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGAGGCTCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10502656	10510776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10502692_10503315_10503425_10509144_10509364_10510226_10510288_10510656
ENSMUSG00000034820.5_15	chr19	+	3399	9	FSM	ENSMUSG00000034820.5	ENST00000448745.5	1739	9	15	-1675	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATGTCAATCTTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	10503319	10525009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10503425_10509144_10509364_10510183_10510288_10510656_10510803_10512467_10512883_10514162_10514282_10516983_10517153_10518044_10518213_10523055
ENSMUSG00000034820.5_20	chr19	+	499	4	ISM	ENSMUSG00000034820.5	ENST00000541963.5	549	5	669	5	21	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGAGGCTCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	10503325	10510776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_10503425_10509144_10509364_10510226_10510288_10510656
ENSMUSG00000034820.5_28	chr19	+	299	3	FSM	ENSMUSG00000034820.5	ENST00000626926.1	306	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGAGGACGTACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	10503370	10509520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10503425_10509144_10509364_10509494
ENSMUSG00000034820.5_31	chr19	+	241	2	ISM	ENSMUSG00000034820.5	ENST00000626926.1	306	3	5784	1	5784	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGTACTGGTGCCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	10509154	10509526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_10509364_10509494
ENSMUSG00000034825.15_0	chr7	-	670	5	FSM	ENSMUSG00000034825.15	ENST00000531090.5	691	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAAGTACATGAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	109380785	109360855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109360949_109361027_109361081_109364672_109364756_109365679_109365842_109380506
ENSMUSG00000034826.15_0	chr5	-	2337	12	FSM	ENSMUSG00000034826.15	ENSMUST00000038514.15	2352	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAATTCTGTCTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	92583069	92563404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92564198_92565311_92565423_92565639_92565760_92567375_92567484_92570340_92570435_92570835_92570891_92572132_92572330_92573481_92573670_92575958_92576186_92578659_92578813_92578897_92578982_92582862
ENSMUSG00000034832.16_0	chr6	-	10883	11	FSM	ENSMUSG00000034832.16	ENSMUST00000089622.11	10904	11	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAATTCTGTGTAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	83418643	83339361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83418531
ENSMUSG00000034832.16_1	chr6	-	5918	12	FSM	ENSMUSG00000034832.16	ENSMUST00000186548.7	5944	12	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGGTGCCAGGAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	83433354	83345029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83346808_83347364_83347702_83350175_83350314_83350764_83350855_83352731_83352883_83353747_83353957_83356853_83356948_83362966_83363058_83379648_83381807_83418198_83418256_83431731_83432463_83433270
ENSMUSG00000034833.11_1	chr10	+	971	6	FSM	ENSMUSG00000034833.11	ENST00000532804.5	985	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGAGCATAGGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130184037	130197973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_130184127_130190487_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034833.11_11	chr10	+	784	5	ISM	ENSMUSG00000034833.11	ENST00000531122.5	833	6	6502	7	6502	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGAGCATAGGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130190585	130197973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034833.11_2	chr10	+	826	6	FSM	ENSMUSG00000034833.11	ENST00000531122.5	833	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGAGCATAGGCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	130184083	130197973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_130184127_130190586_130190637_130191319_130191374_130192634_130192772_130196515_130196725_130197640
ENSMUSG00000034839.6_0	chr9	+	2422	3	FSM	ENSMUSG00000034839.6	ENSMUST00000038407.6	2440	3	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAAGGGATTCTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	60620287	60646082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_60620689_60631429_60631641_60644272
ENSMUSG00000034839.6_1	chr9	+	1952	3	FSM	ENSMUSG00000034839.6	ENST00000299213.10	1964	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTTTATCTGAGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	60620494	60645822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_60620689_60631432_60631641_60644272
ENSMUSG00000034842.17_2	chr5	+	872	3	FSM	ENSMUSG00000034842.17	ENST00000349321.7	887	3	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTCGGGGGTAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	92534754	92541025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92534851_92535992_92536071_92540327
ENSMUSG00000034842.17_5	chr5	+	780	2	ISM	ENSMUSG00000034842.17	ENST00000349321.7	887	3	1246	3	-13	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTCGGGGGTAAGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	92535988	92541025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_92536071_92540327
ENSMUSG00000034845.7_0	chr8	-	1161	3	ISM	ENSMUSG00000034845.7	ENST00000252590.9	1185	4	13	9541	13	-9541	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGCCTTCCCCGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	71964351	71960244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_71960952_71961107_71961205_71963994
ENSMUSG00000034848.18_0	chr2	-	4445	29	FSM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	21	4	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGGTTTATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66086940	66014674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446_66082577_66086857
ENSMUSG00000034848.18_2	chr2	-	4364	28	ISM	ENSMUSG00000034848.18	ENSMUST00000102718.10	4470	29	4383	4	4358	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGGTTTATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	66082578	66014674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_66015188_66016497_66016566_66018603_66018725_66021902_66022128_66028011_66028208_66031466_66031629_66031816_66031968_66037795_66037878_66038997_66039109_66040335_66040525_66047528_66047636_66052997_66053137_66053858_66053970_66054419_66054493_66056249_66056489_66057074_66057297_66059325_66059484_66061632_66061763_66065386_66065588_66065916_66066015_66066564_66066758_66068130_66068230_66069866_66069952_66072974_66073133_66077651_66077775_66079738_66079906_66082237_66082349_66082446
ENSMUSG00000034850.16_0	chr2	+	4791	4	FSM	ENSMUSG00000034850.16	ENSMUST00000035871.15	4811	4	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGGCTGTTTCCGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	127089842	127103022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127090005_127090411_127090730_127097924_127098090_127098876
ENSMUSG00000034854.9_0	chr10	+	3956	10	FSM	ENSMUSG00000034854.9	ENSMUST00000044844.9	3971	10	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTCATAGCTCAGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	81193330	81202050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81193721_81195915_81196127_81196932_81197072_81197147_81197334_81197858_81197952_81198038_81198132_81198521_81198693_81198766_81198862_81199386_81199518_81199603
ENSMUSG00000034858.17_0	chr9	+	4183	13	FSM	ENSMUSG00000034858.17	ENSMUST00000215370.2	4205	13	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATATATGCAAAAAACTAA	NA	NA	NA	NA	NA	NA	NA	NA	74860261	74939724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74860342_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ENSMUSG00000034858.17_2	chr9	+	4331	13	FSM	ENSMUSG00000034858.17	ENSMUST00000170846.8	4355	13	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGTATTTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	74860350	74939742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74860561_74860995_74861113_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ENSMUSG00000034858.17_4	chr9	+	3767	12	FSM	ENSMUSG00000034858.17	ENSMUST00000081746.7	3795	12	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTAATTTTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	74883410	74939357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_74883559_74911546_74911732_74913569_74913773_74914243_74914370_74915932_74917749_74920222_74920337_74923125_74923206_74924319_74924429_74926278_74926438_74930866_74930936_74932932_74933130_74938796
ENSMUSG00000034867.17_0	chr7	+	4271	29	FSM	ENSMUSG00000034867.17	ENSMUST00000040844.16	4284	29	11	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTCGTGCCATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	35285679	35338649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745_35307879_35311887_35311981_35313879_35314008_35314452_35314536_35315272_35315389_35316271_35316365_35318739_35318938_35319782_35319843_35319967_35320088_35321729_35321775_35325071_35325192_35326828_35327027_35327851_35327972_35330567_35330730_35332361_35332474_35335655_35335735_35335954_35336028_35337438
ENSMUSG00000034867.17_6	chr7	+	1897	12	FSM	ENSMUSG00000034867.17	ENSMUST00000186245.7	1926	12	21	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTGAATTTGAGTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	35285695	35308531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_35285795_35291176_35291308_35299739_35299851_35300914_35301072_35301852_35302008_35302979_35303040_35303123_35303178_35303260_35303327_35303637_35303715_35305207_35305330_35306525_35306605_35307745
ENSMUSG00000034868.10_2	chr17	-	2126	4	FSM	ENSMUSG00000034868.10	ENSMUST00000038446.10	2143	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGTCCTCTTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71297875	71280134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71281492_71282453_71282616_71284042_71284242_71297467
ENSMUSG00000034872.7_0	chr10	-	3490	6	FSM	ENSMUSG00000034872.7	ENSMUST00000045102.7	3521	6	28	3	28	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGCCAGTCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	81179072	81171101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81173869_81174030_81174113_81176097_81176211_81177021_81177203_81177324_81177511_81178911
ENSMUSG00000034875.6_0	chr7	-	2281	3	FSM	ENSMUSG00000034875.6	ENSMUST00000040962.6	2298	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCAAGTTGTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	35255720	35246617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35247549_35250878_35251087_35254578
ENSMUSG00000034880.8_0	chr8	+	290	2	FSM	ENSMUSG00000034880.8	ENST00000595444.1	297	2	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTCGCAGGGAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	71909907	71918114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71909977_71917893
ENSMUSG00000034880.8_1	chr8	+	597	2	FSM	ENSMUSG00000034880.8	ENSMUST00000048914.8	607	2	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCACTACGTATGTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	71917610	71918389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71917712_71917893
ENSMUSG00000034880.8_3	chr8	+	219	1	ISM	ENSMUSG00000034880.8	ENST00000595444.1	297	2	7991	4	293	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTCGCAGGGAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	71917895	71918114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_71917900_71918100
ENSMUSG00000034883.10_0	chr12	+	1487	4	FSM	ENSMUSG00000034883.10	ENSMUST00000110621.3	1500	4	8	5	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATATCAATGTCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	69215595	69225778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69215837_69218635_69218735_69221165_69221888_69225353
ENSMUSG00000034889.9_0	chr10	+	2697	9	FSM	ENSMUSG00000034889.9	ENSMUST00000050867.8	2715	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAACTGGCTTCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	81156946	81162068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81157281_81158271_81158840_81158954_81159101_81159452_81159616_81159743_81159859_81160136_81160330_81160702_81160823_81160923_81161211_81161297
ENSMUSG00000034892.9_0	chr12	-	369	3	FSM	ENSMUSG00000034892.9	ENSMUST00000037023.9	390	3	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACTTTAATTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69205950	69204506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69204596_69205434_69205535_69205770
ENSMUSG00000034893.10_0	chr14	-	2878	23	FSM	ENSMUSG00000034893.10	ENST00000349995.10	2893	23	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTTGTTATGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	75991953	75939780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_75940127_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ENSMUSG00000034893.10_25	chr14	-	4255	23	FSM	ENSMUSG00000034893.10	ENSMUST00000049168.9	4268	23	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAGATCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	75991991	75939815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_75941501_75944529_75944629_75945361_75945490_75950640_75950717_75954307_75954443_75954548_75954638_75957131_75957253_75959541_75959632_75962150_75962276_75965147_75965254_75966710_75966872_75968034_75968175_75969415_75969508_75970350_75970478_75971337_75971382_75975402_75975484_75976943_75977070_75977975_75978069_75979120_75979196_75979780_75979947_75981005_75981068_75984492_75984640_75991704
ENSMUSG00000034898.18_0	chr9	-	4612	6	FSM	ENSMUSG00000034898.18	ENSMUST00000093811.11	4640	6	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGAAAAAGAGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79885069	79722343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_79723180_79725179_79727989_79760903_79761083_79767361_79767536_79805476_79805759_79884737
ENSMUSG00000034902.18_0	chr10	+	4192	17	FSM	ENSMUSG00000034902.18	ENSMUST00000163075.8	4208	17	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	81128803	81155797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81153599
ENSMUSG00000034902.18_1	chr10	+	4296	19	FSM	ENSMUSG00000034902.18	ENSMUST00000045469.15	4323	19	17	10	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAAACAGCTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	81128855	81155797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81128987_81140517_81140550_81141019_81141113_81141532_81141664_81142141_81142260_81143317_81143471_81144781_81145082_81146512_81146719_81147476_81147561_81147807_81147857_81148335_81148421_81148741_81148904_81149196_81149336_81149453_81149487_81149828_81149928_81150825_81150953_81151712_81151791_81153159_81153238_81153599
ENSMUSG00000034903.19_0	chr2	-	5033	14	FSM	ENSMUSG00000034903.19	ENSMUST00000112429.9	5045	14	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTGTAGCCTGTGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	65068958	64918682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
ENSMUSG00000034903.19_1	chr2	-	5004	14	FSM	ENSMUSG00000034903.19	ENSMUST00000102726.8	5031	14	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTACAGTCTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65068952	64918702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_64919902_64926031_64926209_64927976_64929734_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
ENSMUSG00000034903.19_2	chr2	-	4837	13	FSM	ENSMUSG00000034903.19	ENSMUST00000090896.10	4867	13	21	9	21	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTACAGTCTGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65068896	64918702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706
ENSMUSG00000034903.19_3	chr2	-	5011	15	FSM	ENSMUSG00000034903.19	ENSMUST00000112431.8	5024	15	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATTTACAGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	65069063	64918704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_64919902_64926031_64926209_64927976_64929737_64932412_64932511_64933503_64933739_64936058_64936173_64937355_64937431_64938101_64938262_64956236_64956462_64956551_64956650_64963922_64964152_64966688_64966891_64981322_64981512_65068706_65068834_65068938
ENSMUSG00000034906.16_0	chr2	-	2684	18	FSM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAACAGTCAGTATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	126975869	126945734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404_126969643_126975768
ENSMUSG00000034906.16_2	chr2	-	2586	17	ISM	ENSMUSG00000034906.16	ENSMUST00000110387.4	2695	18	6229	6	6229	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAACAGTCAGTATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	126969645	126945734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_126946201_126947765_126947842_126948023_126948116_126949273_126949391_126950404_126950579_126955479_126955591_126958451_126958575_126959425_126959533_126959996_126960146_126963044_126963248_126963959_126964052_126965456_126965647_126966750_126966876_126967470_126967607_126968034_126968128_126969023_126969115_126969404
ENSMUSG00000034908.17_0	chr9	-	4240	26	FSM	ENSMUSG00000034908.17	ENSMUST00000038488.17	4248	26	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATGTGTTGGGAGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	45866553	45849159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ENSMUSG00000034908.17_1	chr9	-	4001	27	FSM	ENSMUSG00000034908.17	ENSMUST00000114573.9	4012	27	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGATTTGGGGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	45866270	45849178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45850615_45850704_45850819_45852598_45852710_45853174_45853281_45853493_45853541_45853690_45853768_45853982_45854092_45854348_45854486_45854875_45854994_45855660_45855785_45855913_45855988_45856441_45856509_45856583_45856658_45856963_45857083_45857803_45857867_45858042_45858115_45858281_45858354_45859133_45859187_45859512_45859607_45861073_45861140_45861330_45861431_45863057_45863142_45863248_45863351_45863911_45863958_45864046_45864212_45864422_45864545_45866021
ENSMUSG00000034923.10_0	chr17	-	808	4	FSM	ENSMUSG00000034923.10	ENST00000375832.5	821	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2053	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGTAGCCTTAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	35302470	35299824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35299890_35300035_35300195_35301803_35302068_35302150
ENSMUSG00000034926.4_0	chr4	+	4006	9	FSM	ENSMUSG00000034926.4	ENSMUST00000047973.4	4028	9	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTAGTCTTTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	106418250	106446304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106418595_106421597_106421754_106428608_106428715_106429421_106429541_106430924_106431189_106435386_106435531_106442986_106443185_106443541_106443721_106443808
ENSMUSG00000034928.17_0	chr13	-	4284	11	FSM	ENSMUSG00000034928.17	ENSMUST00000125871.8	4292	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54835899	54827213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831964_54832150_54832302_54835306
ENSMUSG00000034928.17_1	chr13	-	3910	11	FSM	ENSMUSG00000034928.17	ENSMUST00000177950.8	3941	11	29	2	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGCCTCTGGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	54835592	54827213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54835306
ENSMUSG00000034928.17_10	chr13	-	3740	11	FSM	ENSMUSG00000034928.17	ENSMUST00000150806.8	3772	11	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTATACGAGTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	54835978	54827235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54835843
ENSMUSG00000034928.17_3	chr13	-	4094	11	FSM	ENSMUSG00000034928.17	ENST00000274811.9	4111	11	9	8	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATACGAGTGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	54835590	54827232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831964_54832150_54832302_54835165
ENSMUSG00000034928.17_4	chr13	-	3791	11	FSM	ENSMUSG00000034928.17	ENSMUST00000134862.8	3797	11	0	6	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACGAGTGCTGCCCAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	54841720	54827228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831033_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ENSMUSG00000034928.17_6	chr13	-	3677	11	FSM	ENSMUSG00000034928.17	ENSMUST00000037422.16	3734	11	47	10	47	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATACGAGTGCTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	54841613	54827232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54829625_54829746_54829847_54829925_54830048_54830139_54830228_54830392_54830515_54830601_54830764_54830855_54831030_54831407_54831576_54831773_54831900_54832150_54832302_54841541
ENSMUSG00000034930.17_0	chr6	+	2174	12	FSM	ENSMUSG00000034930.17	ENSMUST00000065512.11	2191	12	8	9	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGATGCCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	83112800	83129551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83113041_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_5	chr6	+	2581	13	FSM	ENSMUSG00000034930.17	ENSMUST00000121093.8	2597	13	9	7	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGATGCCTTCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83114078	83129553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83114438_83114941_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_7	chr6	+	3068	12	FSM	ENSMUSG00000034930.17	ENSMUST00000087938.11	3080	12	5	7	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGATGCCTTCTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	83114095	83129553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034930.17_9	chr6	+	2568	13	FSM	ENSMUSG00000034930.17	ENST00000305557.9	2586	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGCTCGATGCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	83114223	83129549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83114438_83114805_83115228_83122911_83123112_83124469_83124532_83124632_83124687_83124808_83124927_83125086_83125297_83126444_83126540_83126652_83126760_83126952_83127082_83127888_83128058_83128217_83128323_83128866
ENSMUSG00000034931.16_0	chr11	+	4309	23	FSM	ENSMUSG00000034931.16	ENSMUST00000039152.14	4325	23	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAACAATGGTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	101623784	101658177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101624015_101624981_101625068_101626203_101626277_101626634_101626721_101628482_101628593_101628955_101629388_101630529_101630675_101631488_101631693_101632326_101632415_101633901_101634000_101635931_101636080_101640710_101640893_101641703_101641899_101642836_101643023_101643110_101643322_101643973_101644156_101645557_101645699_101648418_101648575_101653034_101653173_101654722_101654852_101654970_101655168_101655603_101655784_101657465
ENSMUSG00000034932.5_0	chr10	-	589	3	FSM	ENSMUSG00000034932.5	ENSMUST00000046114.5	604	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCACATGTGTGTCATGCC	NA	NA	NA	NA	NA	NA	NA	NA	81102758	81100551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81100832_81101484_81101642_81102606
ENSMUSG00000034936.3_0	chr11	+	1377	2	FSM	ENSMUSG00000034936.3	ENSMUST00000039388.3	1382	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTGATCTGGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	101556371	101558658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101556464_101557373
ENSMUSG00000034940.16_22	chr11	+	3654	20	ISM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	7081	3	7074	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACTCAGGGTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	83862375	83931793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910185_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ENSMUSG00000034940.16_25	chr11	+	3662	19	ISM	ENSMUSG00000034940.16	ENST00000621136.4	3744	20	7082	5	7075	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCAAGCCCCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	83862376	83931835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910185_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ENSMUSG00000034940.16_3	chr11	+	3726	21	FSM	ENSMUSG00000034940.16	ENST00000619541.4	3733	21	4	3	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGACTCAGGGTGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	83855298	83931793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83855373_83862377_83862419_83867908_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910185_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83930481_83930518_83931622
ENSMUSG00000034940.16_9	chr11	+	3735	20	FSM	ENSMUSG00000034940.16	ENST00000621136.4	3744	20	4	5	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCAAGCCCCCTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	83855298	83931835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83855373_83862377_83862419_83867905_83868028_83869745_83869877_83872242_83872349_83873021_83873134_83878738_83878817_83880505_83880703_83881520_83881770_83885154_83885289_83892683_83892797_83892998_83893062_83899443_83900377_83910185_83910780_83914086_83914251_83915103_83915158_83915820_83915918_83917443_83917593_83930036_83930148_83931622
ENSMUSG00000034947.14_0	chr11	+	2293	9	FSM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGAAGGAAAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	101473071	101482607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101473152_101473450_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUSG00000034947.14_1	chr11	+	2413	9	FSM	ENSMUSG00000034947.14	ENSMUST00000100403.9	2428	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGAAGGAAAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	101473075	101482607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101473152_101473326_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUSG00000034947.14_2	chr11	+	2214	8	ISM	ENSMUSG00000034947.14	ENSMUST00000039581.14	2304	9	382	7	382	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGAAGGAAAAGGGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	101473449	101482607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_101473531_101474383_101474611_101475271_101475336_101477064_101477219_101479678_101479820_101479923_101479968_101480760_101480815_101481158
ENSMUSG00000034949.19_0	chr10	+	3331	18	FSM	ENSMUSG00000034949.19	ENSMUST00000117798.8	3349	18	18	0	18	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGGCCTTCATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	81069006	81087957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81069077_81073190_81073426_81075263_81075349_81075767_81076049_81077828_81078009_81078603_81078791_81079483_81079630_81080494_81080615_81081238_81081379_81081862_81081996_81082423_81082591_81083052_81083228_81084223_81084363_81084817_81084913_81084998_81085095_81085518_81085631_81086470_81086569_81087085
ENSMUSG00000034951.11_0	chr7	-	2891	17	FSM	ENSMUSG00000034951.11	ENSMUST00000057576.8	2902	17	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGGGTGTTTCCTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	121580923	121522061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121522692_121524646_121524791_121528409_121528525_121529752_121529837_121534880_121535022_121536176_121536364_121540392_121540459_121543000_121543118_121548967_121549123_121550385_121550514_121555152_121555352_121562360_121562484_121563423_121563507_121570502_121570672_121576489_121576607_121576838_121576988_121580639
ENSMUSG00000034957.11_0	chr7	+	2093	2	FSM	ENSMUSG00000034957.11	ENSMUST00000205391.2	2161	2	51	17	41	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATATCAAACTCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	34818768	34821336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_34819197_34819671
ENSMUSG00000034957.11_1	chr7	+	2611	1	FSM	ENSMUSG00000034957.11	ENSMUST00000042985.11	2626	1	2	13	2	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAAACTCAATTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	34818729	34821340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_34818700_34821300
ENSMUSG00000034973.17_0	chr9	+	7957	39	FSM	ENSMUSG00000034973.17	ENST00000237163.9	7969	39	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTGGTCTCAAGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	86349254	86436680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_86349358_86367383_86367657_86369306_86369489_86371630_86371802_86374033_86374224_86376448_86376548_86382848_86382949_86383953_86384037_86385045_86385155_86386229_86386351_86388247_86388368_86388457_86388573_86388923_86388954_86389556_86389791_86394613_86395233_86395877_86396153_86397310_86397464_86399019_86399118_86400206_86400467_86401925_86403913_86404815_86404928_86405006_86405190_86406276_86406403_86408824_86408960_86413767_86413824_86414982_86415088_86417960_86418028_86418167_86418313_86418495_86418576_86424411_86424522_86424787_86424938_86425061_86425124_86427293_86427447_86430222_86430360_86430853_86430910_86432055_86432221_86433698_86433829_86435450_86435502_86436068
ENSMUSG00000034974.14_0	chr10	+	1715	9	FSM	ENSMUSG00000034974.14	ENSMUST00000178422.9	1730	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGCTCCGAAAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	81018845	81029023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81018931_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUSG00000034974.14_1	chr10	+	1668	9	FSM	ENSMUSG00000034974.14	ENSMUST00000047665.7	1676	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGCTCCGAAAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	81019096	81029023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81019135_81019809_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUSG00000034974.14_2	chr10	+	1620	8	FSM	ENSMUSG00000034974.14	ENSMUST00000219850.2	1482	8	68	-206	68	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGCTCCGAAAAGGACA	NA	NA	NA	NA	NA	NA	NA	NA	81019819	81029023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81019910_81025772_81026134_81026215_81026346_81026431_81026481_81026875_81026903_81027592_81027746_81028130_81028177_81028259
ENSMUSG00000034981.10_0	chr5	+	5055	4	FSM	ENSMUSG00000034981.10	ENSMUST00000040576.10	5068	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGCAGGAAGGTCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	91665480	91774747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_91665817_91741676_91742361_91760856_91760936_91770791
ENSMUSG00000034990.16_0	chr7	+	3456	25	FSM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGCCAGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	120691892	120762308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120691925_120693765_120693889_120698358_120698491_120701721_120701958_120705094_120705199_120710194_120710296_120713692_120713833_120717764_120717889_120721090_120721307_120724642_120724811_120726854_120726996_120729257_120729317_120730489_120730608_120731587_120731662_120732009_120732146_120733150_120733342_120738999_120739094_120743075_120743206_120744674_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552_120759749_120762089
ENSMUSG00000034990.16_10	chr7	+	3408	24	ISM	ENSMUSG00000034990.16	ENST00000388958.8	3457	25	1882	8	1882	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATTCTTAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	120693774	120762301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_120693889_120698358_120698491_120701721_120701958_120705094_120705199_120710194_120710296_120713692_120713833_120717764_120717889_120721090_120721307_120724642_120724811_120726854_120726996_120729257_120729317_120730489_120730608_120731587_120731662_120732009_120732146_120733150_120733342_120738999_120739094_120743075_120743206_120744674_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552_120759749_120762089
ENSMUSG00000034990.16_18	chr7	+	1404	9	ISM	ENSMUSG00000034990.16	ENST00000550753.5	1417	10	3821	0	3821	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGCCAGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	120738956	120762308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_120739094_120743075_120743206_120744674_120744863_120746855_120747012_120754351_120754495_120754997_120755135_120755650_120755749_120759552_120759749_120762089
ENSMUSG00000034993.8_0	chr11	-	2748	6	FSM	ENSMUSG00000034993.8	ENSMUST00000040430.8	2766	6	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTGAGTCCTGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	101357047	101349579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101351103_101351202_101351445_101353023_101353114_101353215_101353387_101353734_101353943_101356533
ENSMUSG00000034994.11_0	chr10	+	3074	14	FSM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	19347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACATGTGCTCGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	81012472	81018325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81012564_81013498_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ENSMUSG00000034994.11_24	chr10	+	2984	13	ISM	ENSMUSG00000034994.11	ENSMUST00000047864.11	3089	14	1033	7	1033	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACATGTGCTCGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	81013497	81018325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_81013714_81013886_81014069_81014514_81014727_81014914_81015094_81015179_81015286_81015377_81015631_81015715_81015912_81015986_81016246_81016398_81016507_81016637_81016992_81017061_81017245_81017326_81017460_81017722
ENSMUSG00000034998.19_0	chr17	+	5074	6	FSM	ENSMUSG00000034998.19	ENSMUST00000112238.9	5085	6	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACACTTTGTGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88748140	88797952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_88748313_88770140_88770692_88783283_88783379_88786703_88786769_88791828_88791898_88793830
ENSMUSG00000035000.9_0	chr2	-	3063	23	FSM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAATGGGTTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62216858	62161978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195279_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517_62215587_62216774
ENSMUSG00000035000.9_1	chr2	-	2979	22	ISM	ENSMUSG00000035000.9	ENST00000678668.1	3070	23	1276	3	1276	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAATGGGTTATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	62215586	62161978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_62163064_62164599_62164674_62164940_62165014_62175399_62175465_62178161_62178262_62178844_62178900_62182465_62182661_62184882_62184953_62186959_62187059_62187303_62187352_62189127_62189250_62189620_62189675_62190628_62190697_62190952_62191061_62193005_62193051_62195279_62195408_62203098_62203212_62204709_62204871_62208547_62208669_62209440_62209514_62209620_62209674_62215517
ENSMUSG00000035007.6_1	chr11	+	3205	5	FSM	ENSMUSG00000035007.6	ENSMUST00000040561.6	3223	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCCATAGCTCCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	101315918	101326489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101316437_101320277_101320437_101322173_101322373_101322907_101323025_101324277
ENSMUSG00000035011.16_0	chr10	+	5924	3	FSM	ENSMUSG00000035011.16	ENSMUST00000048128.15	5938	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATATCTCTTTGCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	80972112	80988050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80972534_80979795_80981052_80983803
ENSMUSG00000035011.16_2	chr10	+	1824	3	FSM	ENSMUSG00000035011.16	ENSMUST00000119606.8	1841	3	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAACAAACCAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	80972396	80984274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80972494_80979795_80981052_80983803
ENSMUSG00000035011.16_3	chr10	+	1832	3	FSM	ENSMUSG00000035011.16	ENSMUST00000117956.2	1863	3	13	18	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAACAAACCAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	80973799	80984274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80973905_80979795_80981052_80983803
ENSMUSG00000035021.14_0	chr12	-	6176	27	NNC	ENSMUSG00000035021.14	novel	5788	27	NA	NA	13	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55033108	54939773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967816_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976307_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ENSMUSG00000035021.14_7	chr12	-	5648	27	FSM	ENSMUSG00000035021.14	ENST00000360310.6	5659	27	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCTGAATTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55033133	54940337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032925
ENSMUSG00000035021.14_8	chr12	-	5779	27	FSM	ENSMUSG00000035021.14	ENSMUST00000173433.8	5788	27	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCTGAATTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	55033285	54940337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54941287_54941742_54941831_54942814_54942958_54945122_54945584_54946784_54947012_54947095_54947344_54955783_54955933_54958094_54958247_54959361_54959526_54963252_54963853_54965222_54965348_54967822_54967931_54969227_54969394_54969824_54970050_54970169_54970266_54974348_54974496_54976311_54976451_54977036_54977133_54981524_54981692_54982266_54982367_54988286_54988422_54990761_54990850_54993586_54993689_55001482_55001627_55021888_55022168_55032450_55032593_55032946
ENSMUSG00000035024.17_0	chr9	+	5472	36	FSM	ENSMUSG00000035024.17	ENSMUST00000073127.14	5499	36	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAAATATAACCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	26941487	27006597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_26941796_26941918_26942127_26948280_26948436_26952688_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963168_26963619_26963677_26963889_26963962_26966767_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998861_26999274_26999493_26999728_26999863_27000595_27000674_27005696_27005769_27005856_27005918_27005992
ENSMUSG00000035024.17_3	chr9	+	3994	28	FSM	ENSMUSG00000035024.17	ENST00000534548.7	4012	28	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAGCAACTTTTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	26952698	27005743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_26952852_26955791_26955977_26956346_26956518_26956823_26956886_26957200_26957289_26959450_26959585_26961592_26961666_26962657_26962784_26962914_26963172_26966655_26966842_26967339_26967475_26969156_26969378_26974559_26974752_26975065_26975164_26975272_26975389_26978238_26978347_26980963_26981079_26981170_26981279_26983020_26983260_26984018_26984099_26993701_26993840_26994125_26994260_26994479_26994677_26997235_26997347_26998677_26998911_26999653_26999863_27000595_27000674_27005696
ENSMUSG00000035027.19_0	chr10	+	2385	11	FSM	ENSMUSG00000035027.19	ENSMUST00000143517.8	2405	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACATGTTGGACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80941761	80960524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956876_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035027.19_1	chr10	+	1531	11	FSM	ENSMUSG00000035027.19	ENSMUST00000105331.8	1556	11	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAAAGCTAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	80941790	80959702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80942073_80944581_80944793_80950859_80951007_80953985_80954064_80954942_80954995_80955090_80955216_80955323_80955538_80956879_80956945_80957736_80957799_80958400_80958447_80959453
ENSMUSG00000035032.13_0	chr9	-	3163	16	FSM	ENSMUSG00000035032.13	ENSMUST00000038648.11	3173	16	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATAAATGAGGTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	105272722	105039363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_105040447_105081988_105082086_105095749_105095811_105121462_105121624_105164830_105164946_105170854_105170949_105172572_105172693_105175477_105175564_105177260_105177340_105177449_105177600_105190613_105190741_105191885_105191951_105200316_105200436_105225171_105225338_105270047_105270360_105272394
ENSMUSG00000035041.9_0	chr10	-	2289	12	FSM	ENSMUSG00000035041.9	ENSMUST00000117422.2	2294	12	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCGGCTCAGTGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	80934703	80920157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925279_80925910_80926018_80926971_80927270_80927631_80927764_80928336_80928492_80928640_80928717_80934489
ENSMUSG00000035041.9_3	chr10	-	1277	9	FSM	ENSMUSG00000035041.9	ENST00000602257.5	1288	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAACCACTGCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	80927754	80920709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80920969_80921483_80921581_80921863_80921949_80922350_80922420_80924343_80924451_80925140_80925273_80925910_80926018_80926971_80927270_80927631
ENSMUSG00000035042.3_0	chr11	-	500	3	FSM	ENSMUSG00000035042.3	ENSMUST00000035938.3	532	3	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACAAAGCTGGCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	83421321	83416612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_83416891_83419981_83420094_83421211
ENSMUSG00000035045.18_0	chrX	+	6891	6	FSM	ENSMUSG00000035045.18	ENST00000338957.4	6906	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATCACTGATGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94942648	94976090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_94943307_94965958_94966099_94968050_94968286_94968869_94968977_94970155_94972177_94972360
ENSMUSG00000035047.10_0	chr9	-	2591	19	FSM	ENSMUSG00000035047.10	ENSMUST00000038671.10	2598	19	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCCCATCCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	21199259	21184753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994_21199069_21199155
ENSMUSG00000035047.10_1	chr9	-	2487	18	FSM	ENSMUSG00000035047.10	ENSMUST00000184326.8	2490	18	181	-178	181	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCCCATCCCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	21199068	21184753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21185545_21186564_21186664_21186732_21186798_21187139_21187271_21187350_21187478_21187680_21187770_21187855_21187932_21190656_21190828_21191459_21191556_21191658_21191786_21192337_21192466_21192957_21193036_21193110_21193208_21193344_21193395_21193469_21193525_21196536_21196664_21197874_21197981_21198994
ENSMUSG00000035048.14_0	chr9	+	589	3	FSM	ENSMUSG00000035048.14	ENSMUST00000190279.7	589	3	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCTTCTGTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	102503494	102511624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102503546_102506961_102507088_102511212
ENSMUSG00000035048.14_1	chr9	+	711	3	FSM	ENSMUSG00000035048.14	ENSMUST00000188398.7	727	3	9	7	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCCACTTGGTTTTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	102503531	102511442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102503887_102506961_102507088_102511212
ENSMUSG00000035048.14_3	chr9	+	400	4	FSM	ENSMUSG00000035048.14	ENSMUST00000038673.14	411	4	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAAGCATATGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	102503861	102511430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102503887_102506745_102506777_102506961_102507088_102511212
ENSMUSG00000035048.14_4	chr9	+	576	3	FSM	ENSMUSG00000035048.14	ENSMUST00000186693.2	595	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAAGCATATGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	102503885	102511430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102504118_102506961_102507088_102511212
ENSMUSG00000035048.14_5	chr9	+	377	3	ISM	ENSMUSG00000035048.14	ENSMUST00000038673.14	411	4	2882	11	2866	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAAAGCATATGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	102506743	102511430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_102506777_102506961_102507088_102511212
ENSMUSG00000035048.14_6	chr9	+	530	2	ISM	ENSMUSG00000035048.14	ENSMUST00000186693.2	595	3	3092	-183	3092	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGCTTCTGTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	102506969	102511624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_102507088_102511212
ENSMUSG00000035049.5_0	chr19	-	4322	34	FSM	ENSMUSG00000035049.5	ENSMUST00000038677.5	4340	34	17	1	17	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTGATGAGTGGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	41884595	41851290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_41851752_41853610_41853694_41853959_41854028_41855144_41855212_41857208_41857259_41859248_41859375_41859573_41859744_41859860_41860029_41860171_41860264_41861347_41861506_41862181_41862290_41862674_41862781_41862967_41863049_41863155_41863315_41864973_41865068_41865539_41865608_41865774_41865930_41866222_41866386_41866467_41866533_41868540_41868663_41868797_41868941_41870597_41870713_41871861_41871960_41872151_41872264_41874085_41874178_41874525_41874625_41875238_41875367_41875449_41875589_41878204_41878322_41878507_41878614_41879522_41879600_41880976_41881061_41883586_41883817_41884377
ENSMUSG00000035051.16_0	chr17	-	4896	23	FSM	ENSMUSG00000035051.16	ENSMUST00000038166.9	4913	23	14	3	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGGTGTGGAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	80597891	80545740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80588624_80588858_80597484
ENSMUSG00000035051.16_1	chr17	-	4723	24	FSM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGACCTGGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80597564	80545745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624_80588858_80597484
ENSMUSG00000035051.16_6	chr17	-	4641	23	ISM	ENSMUSG00000035051.16	ENSMUST00000086555.11	4737	24	8717	6	8717	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGACCTGGTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80588855	80545745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_80546360_80549380_80549582_80553103_80553239_80554537_80554613_80555699_80555835_80557281_80557366_80557448_80557545_80558660_80558938_80560515_80560717_80561693_80561868_80562980_80563078_80565502_80565620_80567650_80567860_80571376_80571432_80572504_80572639_80574943_80575069_80576180_80576377_80577795_80577918_80580360_80580540_80582192_80583032_80583278_80583465_80585651_80585811_80588624
ENSMUSG00000035062.14_0	chrX	-	2208	5	FSM	ENSMUSG00000035062.14	ENSMUST00000044382.7	2219	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCTAACTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	94702104	94682804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94684258_94685769_94685933_94686913_94687087_94688912_94689085_94701857
ENSMUSG00000035062.14_1	chrX	-	2134	5	FSM	ENSMUSG00000035062.14	ENSMUST00000120620.8	2156	5	16	6	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCTAACTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	94701998	94682804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94684258_94685769_94685965_94686913_94687087_94688912_94689085_94701857
ENSMUSG00000035062.14_2	chrX	-	2064	5	FSM	ENSMUSG00000035062.14	ENSMUST00000119640.8	2075	5	8	3	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATGCTAACTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	94701981	94682804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94684258_94685769_94685933_94686913_94687066_94688912_94689085_94701857
ENSMUSG00000035064.18_0	chr7	+	6564	18	FSM	ENSMUSG00000035064.18	ENSMUST00000047875.16	6580	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGGATGCTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	120442061	120506665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120442324_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000035064.18_10	chr7	+	2529	18	FSM	ENSMUSG00000035064.18	ENSMUST00000106488.3	2537	18	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTGTATTCCGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120450412	120502712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120450593_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000035064.18_7	chr7	+	3033	18	FSM	ENSMUSG00000035064.18	ENSMUST00000106489.9	3047	18	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACAGGTTTGGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	120442829	120503217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120443009_120457566_120457886_120472531_120472633_120475654_120475716_120479036_120479075_120479527_120479700_120483880_120484031_120484644_120484778_120485032_120485161_120485808_120486011_120487081_120487150_120488412_120488491_120488911_120488975_120490818_120490954_120491087_120491277_120494406_120494532_120498590_120498770_120502504
ENSMUSG00000035069.4_0	chr4	+	1907	9	FSM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTGCCTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	103171012	103223636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_103171081_103176218_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035069.4_2	chr4	+	1837	8	ISM	ENSMUSG00000035069.4	ENSMUST00000035780.4	1915	9	5212	4	5212	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTCCTTGCCTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	103176220	103223636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_103176726_103178836_103179066_103182215_103182390_103182489_103182598_103186034_103186164_103188501_103188577_103210698_103210849_103223169
ENSMUSG00000035078.7_0	chr14	-	2558	10	FSM	ENSMUSG00000035078.7	ENSMUST00000058679.7	2570	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAAAAGTGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	63781423	63760929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_63761667_63764239_63764392_63765559_63765781_63767173_63767316_63767636_63767799_63771775_63771994_63774440_63774615_63777702_63777829_63779796_63779906_63780906
ENSMUSG00000035086.14_0	chr11	-	4357	12	FSM	ENSMUSG00000035086.14	ENSMUST00000130916.8	4365	12	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTTCCAATTTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	101193104	101176777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101179808_101180608_101180752_101181264_101181326_101182208_101182359_101184826_101184974_101185795_101185991_101186120_101186258_101186359_101186451_101187083_101187143_101189834_101189903_101192553_101192683_101192957
ENSMUSG00000035093.17_0	chr2	-	6783	18	FSM	ENSMUSG00000035093.17	ENSMUST00000053699.13	6797	18	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGAGAATTTCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	125624785	125578914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125582838_125585733_125585954_125587716_125587872_125589304_125589526_125592198_125592362_125593648_125593782_125594733_125594901_125599113_125599256_125599351_125599520_125600085_125600167_125602191_125602327_125609294_125609411_125609728_125609754_125610026_125610254_125613328_125613465_125615095_125615421_125617472_125617652_125624518
ENSMUSG00000035095.12_0	chr14	+	4211	4	FSM	ENSMUSG00000035095.12	ENSMUST00000121288.2	4231	4	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAGGAGATATCCA	NA	NA	NA	NA	NA	NA	NA	NA	63673850	63702935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63674082_63679361_63679463_63689319_63690089_63699825
ENSMUSG00000035104.15_0	chr6	+	1759	3	FSM	ENSMUSG00000035104.15	ENSMUST00000042974.15	1773	3	5	9	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTCTTTTGCTTCGT	NA	NA	NA	NA	NA	NA	NA	NA	82018608	82070071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_82018883_82048035_82048224_82068774
ENSMUSG00000035105.6_0	chr12	-	2649	5	FSM	ENSMUSG00000035105.6	ENSMUST00000039516.4	2662	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTTTGGTTCATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	54250634	54225767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54227442_54228416_54228491_54230665_54230803_54232326_54232447_54249990
ENSMUSG00000035107.14_0	chr16	+	6522	16	FSM	ENSMUSG00000035107.14	ENSMUST00000046663.8	6561	16	23	16	23	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATACAAATAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58228828	58290074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_58229315_58244923_58245152_58253688_58253827_58265703_58265756_58268814_58268888_58269178_58269313_58270161_58270203_58271086_58271303_58272023_58272149_58275488_58275640_58276439_58276521_58276645_58276772_58281317_58281412_58283421_58283472_58284552_58284691_58285685
ENSMUSG00000035112.18_0	chr11	+	4095	19	FSM	ENSMUSG00000035112.18	ENSMUST00000103108.8	4117	19	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGAAAGGCTGTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	101151434	101168224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101152107_101153548_101153722_101154594_101154816_101155093_101155252_101155905_101155995_101156072_101156290_101159051_101159317_101159528_101159651_101159887_101159947_101160045_101160161_101160395_101160513_101164817_101164956_101165652_101165696_101165800_101166376_101166455_101166517_101166807_101167214_101167303_101167504_101167653_101167752_101167858
ENSMUSG00000035125.11_0	chr6	+	4159	17	FSM	ENSMUSG00000035125.11	ENSMUST00000043195.11	4192	17	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCCAAATAATGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	81900672	81936886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_81900920_81902746_81902876_81907648_81907874_81909794_81909893_81912886_81913003_81916360_81916548_81918298_81918423_81919909_81919992_81920409_81920523_81921301_81921502_81923443_81923595_81925243_81925363_81926889_81926967_81928700_81928768_81930254_81930402_81933811_81933937_81934934
ENSMUSG00000035126.20_3	chr4	-	1582	10	FSM	ENSMUSG00000035126.20	ENST00000371023.7	1602	10	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGGAACAAGCATCCTT	NA	NA	NA	NA	NA	NA	NA	NA	102971462	102921653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_102921748_102923456_102923684_102929845_102930041_102939405_102939539_102944529_102944670_102947594_102947752_102952525_102952639_102953787_102953973_102960423_102960602_102971302
ENSMUSG00000035131.15_0	chr1	+	4006	8	FSM	ENSMUSG00000035131.15	ENSMUST00000074622.11	4023	8	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACAAGAAGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	146370506	146778201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_146371816_146390405_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035131.15_3	chr1	+	2751	8	FSM	ENSMUSG00000035131.15	ENSMUST00000166814.8	2760	8	0	9	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACAAGAAGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	146373424	146778201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_146373479_146390405_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035131.15_7	chr1	+	2694	7	ISM	ENSMUSG00000035131.15	ENSMUST00000166814.8	2760	8	16984	9	16984	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACAAGAAGTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	146390408	146778201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_146390692_146558313_146558505_146577393_146577585_146622217_146622324_146627492_146627730_146707298_146707522_146776738
ENSMUSG00000035133.10_1	chr12	+	4756	7	FSM	ENSMUSG00000035133.10	ENST00000556611.5	4762	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAGGGGTTAGTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	52550809	52614177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_52550832_52562861_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035133.10_2	chr12	+	4834	7	FSM	ENSMUSG00000035133.10	ENST00000539826.6	4839	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATATGGTATTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	52550809	52614252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_52550832_52562861_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035133.10_3	chr12	+	4800	6	FSM	ENSMUSG00000035133.10	ENSMUST00000110725.2	5197	6	14	383	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTATATGGTATTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	52562873	52614252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_52566751_52589271_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035133.10_4	chr12	+	4727	6	ISM	ENSMUSG00000035133.10	ENST00000556611.5	4762	7	12063	2	13	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGGTTAGTAGTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	52562872	52614181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_52566751_52589274_52589420_52604271_52604350_52606750_52606883_52609104_52609211_52613793
ENSMUSG00000035139.15_0	chr13	+	3311	17	FSM	ENSMUSG00000035139.15	ENSMUST00000040117.15	3328	17	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCATCTCAGGCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	51805742	51838073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_51805857_51806642_51806792_51808421_51808672_51809134_51809277_51810916_51811147_51816656_51816736_51819307_51819511_51824842_51824966_51827105_51827196_51827923_51828066_51830322_51830490_51831176_51831316_51832869_51833027_51833768_51833990_51836035_51836191_51836479_51836670_51837313
ENSMUSG00000035142.19_0	chr12	+	2957	11	FSM	ENSMUSG00000035142.19	ENSMUST00000040090.16	2987	11	12	18	12	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATTAAAAAGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52144531	52359509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_52144675_52145135_52145284_52147249_52147285_52190751_52190843_52227874_52227915_52227999_52228091_52317821_52317916_52333120_52333207_52349463_52349585_52352580_52352664_52357484
ENSMUSG00000035150.16_0	chrX	-	3628	12	FSM	ENSMUSG00000035150.16	ENSMUST00000050328.15	3647	12	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAGCATTAATTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	93256305	93232321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93234529_93239877_93240051_93240893_93241064_93243319_93243465_93244495_93244591_93246419_93246555_93247555_93247715_93248654_93248750_93252934_93253057_93253141_93253270_93255324_93255389_93256170
ENSMUSG00000035151.13_0	chr8	-	4309	9	FSM	ENSMUSG00000035151.13	ENSMUST00000053902.4	4319	9	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCTTTCTGTGGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	84059108	84039653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84043091_84043429_84043564_84044359_84044429_84046042_84046177_84048061_84048192_84049295_84049394_84055740_84055770_84057739_84057888_84058978
ENSMUSG00000035152.15_0	chr11	+	5607	22	FSM	ENSMUSG00000035152.15	ENSMUST00000018875.13	5625	22	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTACACAAAATAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	83193314	83295849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83255620_83255663_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUSG00000035152.15_15	chr11	+	3199	20	ISM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	5443	4	-21	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAACATAAACTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	83199042	83293834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUSG00000035152.15_19	chr11	+	1163	8	FSM	ENSMUSG00000035152.15	ENST00000441083.1	1181	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATACGGTAAGGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	83237490	83288726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83237734_83241804_83241998_83256472_83256624_83258708_83258855_83260496_83260609_83280528_83280614_83281520_83281608_83288580
ENSMUSG00000035152.15_7	chr11	+	3260	21	FSM	ENSMUSG00000035152.15	ENSMUST00000065692.14	3269	21	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAACATAAACTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	83193604	83293834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83193664_83199040_83199101_83207245_83207352_83212764_83212901_83215336_83215583_83223811_83224003_83226206_83226429_83227167_83227289_83227591_83227688_83230138_83230255_83232099_83232266_83233425_83233525_83237473_83237734_83241804_83241998_83256472_83256620_83258708_83258855_83260478_83260609_83280528_83280614_83281520_83281608_83288580_83288736_83293395
ENSMUSG00000035158.16_0	chr6	+	1784	9	FSM	ENSMUSG00000035158.16	ENST00000314557.10	1803	9	0	19	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAGAAAACAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	97968740	97995537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_97968915_97970087_97970316_97971341_97971426_97973334_97973431_97980847_97980966_97983101_97983159_97987355_97987432_97990629_97990778_97994734
ENSMUSG00000035161.8_0	chr14	-	4980	19	FSM	ENSMUSG00000035161.8	ENSMUST00000053959.7	4993	19	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTAAAAACAAAACTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	62998552	62913782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_62915617_62930980_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ENSMUSG00000035161.8_2	chr14	-	10867	18	FSM	ENSMUSG00000035161.8	ENSMUST00000223585.2	10883	18	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATATACTGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	62998552	62923259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_62931124_62933147_62933242_62934041_62934405_62938079_62938312_62939819_62939963_62940622_62940750_62942132_62942346_62943301_62943413_62945053_62945149_62946339_62946473_62946916_62947070_62951133_62951289_62951741_62951868_62953747_62953932_62981357_62981448_62996649_62996800_62997614_62997693_62997996
ENSMUSG00000035164.9_0	chr9	-	2906	6	FSM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAACTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52060657	52026519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974_52055727_52060568
ENSMUSG00000035164.9_1	chr9	-	2817	5	ISM	ENSMUSG00000035164.9	ENST00000528673.5	2921	6	4937	9	4937	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAACTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52055726	52026519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_52028103_52028838_52028946_52031456_52031692_52037862_52038003_52054974
ENSMUSG00000035168.17_0	chr2	+	7402	27	FSM	ENSMUSG00000035168.17	ENSMUST00000112568.8	7422	27	13	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAAGTGGGTTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	59442398	59676054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621222_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUSG00000035168.17_3	chr2	+	7860	27	FSM	ENSMUSG00000035168.17	ENSMUST00000037526.11	7873	27	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTTTATATTTATATAT	NA	NA	NA	NA	NA	NA	NA	NA	59442392	59676485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_59442541_59477112_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUSG00000035168.17_7	chr2	+	7238	26	FSM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCCAAGTGGGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	59477154	59676053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_59477217_59529691_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUSG00000035168.17_8	chr2	+	7173	25	ISM	ENSMUSG00000035168.17	ENSMUST00000139863.3	7246	26	52541	7	52541	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAAGTGGGTTGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	59529695	59676054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_59529772_59555004_59555194_59588808_59588914_59601475_59601607_59602696_59602884_59615667_59615932_59621119_59621243_59621942_59622225_59623439_59623592_59626138_59626371_59627929_59628097_59629914_59630523_59636619_59636729_59637910_59638034_59645661_59645899_59647828_59648015_59650550_59650630_59663479_59663614_59664924_59665049_59665735_59665912_59667429_59667563_59669318_59669411_59671282_59671430_59672353_59672455_59673038
ENSMUSG00000035171.10_0	chr19	-	1603	4	FSM	ENSMUSG00000035171.10	ENSMUST00000038830.10	1614	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGTGTCTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21630330	21574676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_21575699_21576118_21576233_21596472_21596580_21629970
ENSMUSG00000035172.16_0	chr11	-	3030	13	FSM	ENSMUSG00000035172.16	ENSMUST00000043397.14	3056	13	15	11	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACACAAAGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	101062162	101053515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055876_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ENSMUSG00000035172.16_1	chr11	-	2990	13	FSM	ENSMUSG00000035172.16	ENSMUST00000164474.8	3010	13	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACACAAAGCCTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	101062131	101053515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101053891_101054331_101054524_101054838_101055298_101055484_101055618_101055885_101056014_101056309_101056518_101057179_101057487_101058275_101058397_101058500_101058659_101058743_101058936_101059040_101059121_101059467_101059524_101061550
ENSMUSG00000035173.15_0	chr19	-	6429	16	FSM	ENSMUSG00000035173.15	ENSMUST00000118592.8	6445	16	11	5	1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGTTGTCTGTTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	56810611	56775917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56779479_56780372_56780593_56781727_56781939_56783521_56783603_56785875_56786066_56786998_56787255_56788495_56788639_56789344_56789432_56789598_56789698_56790316_56790422_56795397_56795518_56796409_56796623_56797624_56797754_56798670_56798798_56801426_56802122_56810419
ENSMUSG00000035173.15_6	chr19	-	942	2	FSM	ENSMUSG00000035173.15	ENST00000369285.7	962	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGCTCACTGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	56810599	56801448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56802211_56810419
ENSMUSG00000035179.5_1	chr19	-	1163	10	NNC	ENSMUSG00000035179.5	novel	1180	10	NA	NA	13	-3	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAGCATGCCCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	10459718	10452297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455560_10455674_10455988_10456053_10456833_10456958_10458643_10458802_10459066_10459185_10459596
ENSMUSG00000035179.5_2	chr19	-	1168	10	FSM	ENSMUSG00000035179.5	ENST00000432063.6	1180	10	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTAGCATGCCCCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	10459722	10452297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10452466_10454391_10454487_10454568_10454683_10454888_10454976_10455560_10455674_10455988_10456053_10456833_10456963_10458647_10458802_10459066_10459185_10459596
ENSMUSG00000035181.7_1	chr12	-	7740	36	FSM	ENSMUSG00000035181.7	ENSMUST00000040583.7	7763	36	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTTGTATTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52018083	51922655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_51924400_51926037_51926252_51927896_51928049_51931049_51931275_51934780_51935054_51935636_51935785_51936369_51936498_51938004_51938251_51940432_51940656_51941045_51941226_51943345_51943415_51944529_51944712_51945837_51946075_51952103_51952284_51956740_51956877_51961756_51961927_51962849_51963040_51965366_51965524_51967172_51967361_51968120_51968227_51971780_51971957_51972036_51972201_51976973_51977084_51984853_51984954_51986353_51986507_51992203_51992316_51994537_51994789_51996714_51996871_51997711_51997968_51999269_51999428_52002162_52002338_52002903_52003054_52003861_52003971_52005635_52005848_52008215_52008428_52017985
ENSMUSG00000035184.16_0	chr14	+	1938	4	FSM	ENSMUSG00000035184.16	ENST00000322475.13	1943	4	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACCCAGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	62801935	62844694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_62801969_62824601_62825336_62843321_62844291_62844492
ENSMUSG00000035184.16_8	chr14	+	1893	3	ISM	ENSMUSG00000035184.16	ENST00000322475.13	1943	4	22678	5	22678	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACACCCAGGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	62824613	62844694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_62825336_62843321_62844291_62844492
ENSMUSG00000035189.18_10	chr10	-	3999	28	FSM	ENSMUSG00000035189.18	ENST00000392977.8	4016	28	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAATATTTTCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	89093510	88784871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89093293
ENSMUSG00000035189.18_40	chr10	-	3751	29	FSM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCCTGTTCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	89163192	88785235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952_89153205_89163111
ENSMUSG00000035189.18_43	chr10	-	3672	28	ISM	ENSMUSG00000035189.18	ENST00000644049.1	3763	29	9990	8	9990	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTCCTGTTCTACATC	NA	NA	NA	NA	NA	NA	NA	NA	89153206	88785235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_88785638_88788047_88788248_88790526_88790633_88796443_88796564_88807129_88807278_88808600_88808754_88814537_88814681_88816805_88816904_88817020_88817079_88818038_88818151_88819616_88819654_88828736_88828902_88831085_88831227_88833939_88834023_88851936_88851998_88859737_88859835_88860827_88860963_88863056_88863179_88865120_88865177_88870936_88871044_88903961_88904094_88920408_88920454_88924054_88924156_88948652_88948812_88952727_88952865_88960981_88961087_88985111_88985307_89152952
ENSMUSG00000035198.10_0	chr11	+	1780	11	FSM	ENSMUSG00000035198.10	ENSMUST00000043680.9	1802	11	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	2512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAACCAAGCCACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	101010774	101017234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101011069_101011372_101011486_101011656_101011825_101013498_101013568_101014239_101014320_101014738_101014866_101015058_101015146_101015248_101015399_101015795_101015949_101016028_101016191_101016857
ENSMUSG00000035199.7_0	chr6	+	1421	3	FSM	ENSMUSG00000035199.7	ENSMUST00000044681.7	1442	3	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGAGTTCTGTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	97187662	97210268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_97187958_97206497_97206716_97209360
ENSMUSG00000035202.9_0	chr9	+	3879	21	FSM	ENSMUSG00000035202.9	ENSMUST00000038863.9	3894	21	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCATAATTTCTACCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	123196000	123291723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_123196173_123200919_123201169_123206765_123206895_123221847_123221940_123224015_123224077_123238678_123238769_123240937_123241082_123247243_123247352_123247699_123247860_123256511_123256617_123260950_123261067_123265181_123265466_123267199_123267299_123270528_123270667_123281809_123281911_123282275_123282459_123283774_123283945_123284024_123284103_123284957_123285070_123288556_123288685_123290563
ENSMUSG00000035203.17_11	chr7	+	2113	10	FSM	ENSMUSG00000035203.17	ENSMUST00000208634.2	2127	10	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCATGGGTGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	5086759	5101167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_2	chr7	+	2458	11	FSM	ENSMUSG00000035203.17	ENST00000270460.11	2474	11	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCACGGTTCAGATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5083261	5101199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5083477_5086661_5086982_5092917_5093168_5095839_5095965_5096310_5096386_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUSG00000035203.17_8	chr7	+	1736	9	FSM	ENSMUSG00000035203.17	ENST00000411543.6	1749	9	7	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGGGGGCCCTCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	5086753	5100859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5086982_5092917_5093168_5095839_5095965_5096897_5096982_5097952_5098257_5098641_5098753_5098886_5098974_5100152_5100411_5100570
ENSMUSG00000035206.11_0	chr10	+	2853	15	FSM	ENSMUSG00000035206.11	ENSMUST00000035597.10	2869	15	7	9	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCACAGTGGCCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	80691115	80704533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80691223_80697179_80697300_80698013_80698197_80698532_80698623_80698788_80698929_80699013_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333_80702495_80703233
ENSMUSG00000035206.11_7	chr10	+	893	7	FSM	ENSMUSG00000035206.11	ENST00000614794.4	902	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCAGGCTCTTCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	80697186	80700001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80697297_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871
ENSMUSG00000035206.11_9	chr10	+	1460	13	FSM	ENSMUSG00000035206.11	ENST00000610743.4	1471	13	7	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGTGCGGCGATAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	80697182	80702511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80697297_80698013_80698197_80698532_80698623_80698788_80698929_80699010_80699154_80699288_80699386_80699871_80699989_80700954_80701037_80701143_80701219_80701288_80701352_80701441_80701542_80701885_80701964_80702333
ENSMUSG00000035212.15_0	chr4	+	1879	4	FSM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGAAGGAGAGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101504924	101516552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_101505023_101509595_101509672_101513305_101513493_101515034
ENSMUSG00000035212.15_2	chr4	+	1745	4	FSM	ENSMUSG00000035212.15	ENSMUST00000106927.2	1754	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGAAGGAGAGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101504989	101516552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_101505023_101509595_101509672_101513374_101513493_101515034
ENSMUSG00000035212.15_4	chr4	+	1783	3	ISM	ENSMUSG00000035212.15	ENSMUST00000030254.15	1898	4	4679	9	4604	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGAAGGAGAGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101509593	101516552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_101509672_101513305_101513493_101515034
ENSMUSG00000035215.10_2	chr10	-	468	4	FSM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	80691043	80688658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80688935_80689591_80689664_80690451_80690543_80691014
ENSMUSG00000035215.10_3	chr10	-	420	3	ISM	ENSMUSG00000035215.10	ENSMUST00000035775.9	468	4	520	0	520	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGCTCTGTAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	80690523	80688658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80688935_80689591_80689664_80690451
ENSMUSG00000035227.8_1	chr7	-	2897	5	FSM	ENSMUSG00000035227.8	ENSMUST00000036274.8	2909	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCTTTTCCTTTCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	99508172	99486775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99507970
ENSMUSG00000035227.8_30	chr7	-	1590	6	FSM	ENSMUSG00000035227.8	ENSMUST00000209032.2	1610	6	5	15	5	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGATGTGAAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	99508113	99488125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99489091_99493906_99494042_99497505_99497667_99498182_99498267_99505619_99505722_99507970
ENSMUSG00000035232.9_0	chrX	-	2102	12	FSM	ENSMUSG00000035232.9	ENSMUST00000045748.7	2115	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	975	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAACACCTTGGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	92875797	92808215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_92808862_92812494_92812635_92820914_92821029_92825072_92825184_92825751_92825854_92827385_92827463_92832499_92832578_92843719_92843810_92845814_92846000_92852476_92852549_92857532_92857675_92875452
ENSMUSG00000035234.19_0	chr5	-	2113	9	FSM	ENSMUSG00000035234.19	ENSMUST00000055245.13	2139	9	15	11	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAAAGTTTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	100968816	100953068	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUSG00000035234.19_1	chr5	-	1644	10	FSM	ENSMUSG00000035234.19	ENSMUST00000117364.8	1657	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAGTGAAAAATGTAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	100968800	100953075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100953318_100953763_100954356_100954644_100954757_100957424_100957510_100957621_100957742_100959874_100960069_100963027_100963095_100965827_100965865_100966382_100966474_100968696
ENSMUSG00000035235.14_0	chr14	+	1611	3	FSM	ENSMUSG00000035235.14	ENSMUST00000165015.9	1619	3	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61835700	61843392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61835796_61837242_61837345_61841978
ENSMUSG00000035235.14_1	chr14	+	1547	3	FSM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61836988	61843392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61837020_61837242_61837345_61841978
ENSMUSG00000035235.14_2	chr14	+	1512	2	ISM	ENSMUSG00000035235.14	ENSMUST00000039562.8	1550	3	258	3	258	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCCTGAGTTTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	61837246	61843392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_61837345_61841978
ENSMUSG00000035238.5_0	chr2	+	1106	3	FSM	ENSMUSG00000035238.5	ENST00000372861.5	1126	3	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGCCTGGTGCAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	163695736	163702148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163696010_163700102_163700461_163701673
ENSMUSG00000035239.7_0	chr7	-	3308	3	FSM	ENSMUSG00000035239.7	ENSMUST00000036331.7	3341	3	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGAACAGCTTGGAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	99477598	99460652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_99463515_99472528_99472741_99477364
ENSMUSG00000035242.16_3	chr10	+	1030	5	FSM	ENSMUSG00000035242.16	ENST00000602676.6	953	5	14	-91	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	21263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGCTGTGTCTTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	80662528	80665118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80662740_80664070_80664217_80664294_80664468_80664544_80664631_80664704
ENSMUSG00000035245.13_0	chr6	-	4401	18	FSM	ENSMUSG00000035245.13	ENSMUST00000054344.11	4424	18	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACATATCTGAACATCT	NA	NA	NA	NA	NA	NA	NA	NA	97126127	97086991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97096923_97097011_97097104_97097177_97097672_97097766_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221_97122446_97124355_97124413_97124837_97125220_97125792
ENSMUSG00000035245.13_4	chr6	-	1314	12	FSM	ENSMUSG00000035245.13	ENST00000540955.5	1331	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTATAGAAGTGTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	97122421	97089028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97089168_97089641_97089745_97090803_97090924_97092961_97093024_97095841_97095911_97102480_97102585_97108312_97108420_97111239_97111345_97112136_97112232_97119786_97119896_97120900_97121002_97122221
ENSMUSG00000035246.17_0	chrX	+	4879	8	FSM	ENSMUSG00000035246.17	ENSMUST00000045898.4	4888	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCACACTTTGGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	92718707	92793548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_92719083_92745690_92745791_92750163_92750281_92761390_92761543_92763784_92763864_92775282_92775426_92778370_92778560_92789824
ENSMUSG00000035247.17_0	chr12	-	8973	43	FSM	ENSMUSG00000035247.17	ENSMUST00000042052.9	8988	43	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTAGGAACCTGTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	51876309	51790509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_51791442_51791548_51791694_51792163_51792315_51792876_51792971_51793055_51793135_51795186_51795795_51797103_51797242_51798638_51798841_51800523_51800652_51800825_51800912_51800997_51801206_51801703_51801887_51803829_51803885_51806001_51806225_51807796_51807954_51809206_51809330_51810803_51810938_51814338_51814561_51815311_51816149_51819056_51819234_51819321_51819489_51820609_51820934_51821433_51821574_51823278_51823414_51829264_51829371_51830964_51831060_51832591_51832739_51834627_51834763_51836954_51837032_51837134_51837399_51838002_51838226_51841196_51841368_51841521_51841661_51844619_51844795_51845436_51845552_51847497_51847597_51847678_51847756_51848946_51849218_51849317_51849600_51850451_51850680_51853144_51853380_51874134_51874297_51875985
ENSMUSG00000035248.10_0	chr13	-	5788	27	ISM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	1041	10	1027	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTCATGGGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	59969920	59919384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373
ENSMUSG00000035248.10_1	chr13	-	5857	28	FSM	ENSMUSG00000035248.10	ENSMUST00000071703.6	5869	28	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACTCATGGGTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	59970959	59919384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59920674_59926565_59926630_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937225_59937340_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483_59945571_59946811_59946963_59947454_59948531_59949829_59950011_59953036_59953190_59955859_59955980_59957191_59957319_59958384_59958455_59959328_59959381_59962679_59962769_59963359_59963538_59964084_59964202_59964471_59964654_59969373_59969925_59970894
ENSMUSG00000035248.10_11	chr13	-	2490	2	FSM	ENSMUSG00000035248.10	ENSMUST00000225576.2	2499	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATATGTGTGTGTTACA	NA	NA	NA	NA	NA	NA	NA	NA	59970947	59967935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59969925_59970446
ENSMUSG00000035248.10_8	chr13	-	2227	12	FSM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTAATTTTATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	59945544	59919698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589_59939694_59942260_59942319_59944633_59944735_59945483
ENSMUSG00000035248.10_9	chr13	-	2161	11	ISM	ENSMUSG00000035248.10	ENST00000375957.5	2234	12	815	7	815	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTAATTTTATCCACA	NA	NA	NA	NA	NA	NA	NA	NA	59944729	59919698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_59920674_59929831_59930158_59932578_59932695_59933534_59933627_59933708_59933757_59936273_59936452_59936997_59937076_59937661_59937752_59939589_59939694_59942260_59942319_59944633
ENSMUSG00000035266.17_1	chr5	-	3681	18	FSM	ENSMUSG00000035266.17	ENSMUST00000044684.14	3689	18	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCGCTCTGGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	100946463	100910017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100910503_100912806_100912942_100914553_100914668_100916147_100916322_100918263_100918363_100919599_100919758_100921810_100922031_100926597_100926703_100927017_100927160_100930823_100931064_100933147_100933294_100934849_100934949_100938004_100938103_100939202_100939276_100939642_100939844_100940529_100940709_100944219_100944929_100946159
ENSMUSG00000035268.15_0	chr2	+	970	3	FSM	ENSMUSG00000035268.15	ENSMUST00000164399.8	983	3	7	6	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTATGATCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163500312	163568072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163500413_163563047_163563222_163567376
ENSMUSG00000035268.15_1	chr2	+	1028	4	FSM	ENSMUSG00000035268.15	ENSMUST00000064703.13	1036	4	6	2	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTATGATCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163500324	163568072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163500413_163545405_163545476_163563047_163563222_163567376
ENSMUSG00000035268.15_6	chr2	+	1051	4	FSM	ENSMUSG00000035268.15	ENSMUST00000109400.3	1059	4	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTATGATCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163535965	163568072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163536077_163545405_163545476_163563047_163563222_163567376
ENSMUSG00000035268.15_9	chr2	+	942	3	ISM	ENSMUSG00000035268.15	ENSMUST00000109400.3	1059	4	9446	0	9446	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCTTATGATCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163545403	163568072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_163545476_163563047_163563222_163567376
ENSMUSG00000035270.16_0	chr16	+	3602	15	FSM	ENSMUSG00000035270.16	ENST00000193391.8	3619	15	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTAAGTATTGTAACA	NA	NA	NA	NA	NA	NA	NA	NA	56025459	56089443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_56025683_56038676_56038872_56044700_56044751_56046089_56046158_56051753_56051916_56057067_56057154_56072465_56072711_56074525_56074612_56078266_56078577_56079734_56081009_56081880_56082101_56085325_56085537_56087424_56087614_56088579_56088788_56089368
ENSMUSG00000035273.15_0	chr5	-	3095	12	FSM	ENSMUSG00000035273.15	ENSMUST00000045617.15	3117	12	14	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCAATTTGCATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100867568	100827357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100828897_100832845_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100846778_100846953_100856522_100856649_100859194_100859341_100867257
ENSMUSG00000035273.15_1	chr5	-	1254	10	FSM	ENSMUSG00000035273.15	ENST00000513463.1	1266	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAGTAAAGTCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	100867442	100832847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100832993_100836686_100836806_100839164_100839280_100840048_100840156_100840750_100840845_100842017_100842066_100843352_100843522_100856522_100856649_100859194_100859341_100867257
ENSMUSG00000035274.14_0	chr9	+	3581	2	FSM	ENSMUSG00000035274.14	ENSMUST00000006559.14	3603	2	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAAAGTGGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	85724445	85729084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_85724646_85725703
ENSMUSG00000035274.14_1	chr9	+	3467	2	FSM	ENSMUSG00000035274.14	ENSMUST00000098500.5	3481	2	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAAAGTGGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	85724922	85729084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_85725009_85725703
ENSMUSG00000035274.14_2	chr9	+	3383	1	NIC	ENSMUSG00000035274.14	novel	3603	2	NA	NA	784	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAAAGTGGCTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	85725701	85729084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_85725700_85729100
ENSMUSG00000035278.10_0	chr10	-	462	6	FSM	ENSMUSG00000035278.10	ENST00000587394.6	477	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTCACAGGAGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	80633999	80630012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80630100_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_2	chr10	-	1247	6	FSM	ENSMUSG00000035278.10	ENSMUST00000036805.7	1260	6	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCATGTCGGAATGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80634448	80631933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80632357_80632424_80632489_80632565_80632657_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_3	chr10	-	334	5	FSM	ENSMUSG00000035278.10	ENST00000591099.6	342	5	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAATAGCCTGCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80634006	80632313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80632357_80632424_80632489_80633606_80633674_80633743_80633812_80633914
ENSMUSG00000035278.10_4	chr10	-	454	4	FSM	ENSMUSG00000035278.10	ENST00000586608.3	467	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAATAGCCTGCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	80634056	80632313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80632357_80632424_80632489_80633606_80633812_80633914
ENSMUSG00000035279.9_0	chr7	+	4338	14	FSM	ENSMUSG00000035279.9	ENSMUST00000057612.9	4348	14	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCGAAGTGTGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4928786	4947818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4928979_4929488_4929516_4929972_4930282_4930550_4930665_4930894_4931009_4931383_4931693_4932235_4932554_4933000_4933163_4936133_4936452_4939261_4939826_4939906_4940222_4940463_4940632_4945712_4945872_4946549
ENSMUSG00000035284.11_0	chr9	+	10655	78	FSM	ENSMUSG00000035284.11	ENST00000395898.3	10674	78	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAAGGGCATCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	67747653	67883183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_67747809_67759772_67759817_67760977_67761021_67766071_67766168_67768065_67768168_67778457_67778568_67781136_67781197_67783508_67783569_67785378_67785460_67786359_67786418_67788611_67788740_67790734_67790842_67791853_67792026_67793538_67793602_67796967_67797095_67797576_67797672_67800362_67800506_67801239_67801433_67802611_67802727_67803369_67803507_67804355_67804480_67805914_67806033_67808726_67808857_67810122_67810202_67810840_67810981_67813074_67813229_67815273_67815354_67816843_67816904_67817377_67817538_67818788_67818906_67820212_67820317_67820487_67820656_67821088_67821394_67822862_67823011_67823627_67823737_67826519_67826654_67828140_67828298_67829121_67829202_67830125_67830186_67830961_67831125_67833051_67833166_67834201_67834306_67834643_67834812_67836642_67836948_67837895_67838044_67839721_67839873_67841722_67841833_67843573_67843744_67844940_67845189_67846204_67846435_67847740_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67862948_67863076_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063
ENSMUSG00000035284.11_8	chr9	+	11520	85	FSM	ENSMUSG00000035284.11	ENSMUST00000077879.7	11527	85	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAAGAGTGGTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	67747677	67902913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_67747809_67759772_67759817_67760977_67761021_67766071_67766168_67768065_67768168_67773461_67773525_67778134_67778201_67778457_67778568_67781136_67781197_67783508_67783569_67785378_67785460_67786359_67786418_67788611_67788740_67790734_67790842_67791853_67792026_67793538_67793602_67796967_67797095_67797576_67797672_67800362_67800506_67801239_67801433_67802611_67802727_67803369_67803507_67804355_67804480_67805914_67806033_67808726_67808857_67810122_67810202_67810840_67810981_67813074_67813229_67815273_67815354_67816843_67816904_67817377_67817538_67818788_67818906_67820212_67820317_67820487_67820656_67821088_67821394_67822862_67823011_67823627_67823737_67826519_67826654_67828140_67828298_67829121_67829202_67830125_67830186_67830961_67831125_67833051_67833166_67834201_67834306_67834643_67834812_67836642_67836948_67837895_67838044_67839721_67839873_67841722_67841833_67843573_67843744_67844940_67845189_67846204_67846435_67847740_67847834_67850638_67851005_67851326_67851414_67852768_67852919_67853105_67853371_67855398_67855560_67856597_67856720_67857514_67857810_67858591_67858982_67860215_67860321_67861005_67861171_67861819_67861949_67862213_67862348_67862948_67863076_67864782_67865019_67868875_67869018_67870330_67870472_67871340_67871423_67871525_67871596_67872746_67872859_67872966_67873081_67874321_67874462_67876556_67876639_67879269_67879384_67880142_67880219_67880563_67880728_67880993_67881040_67883063_67883188_67889786_67889902_67895244_67895334_67900219_67900344_67902141_67902226_67902569
ENSMUSG00000035293.14_0	chr12	+	6770	15	FSM	ENSMUSG00000035293.14	ENSMUST00000054308.13	6803	15	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAATGGTCGATGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	51394866	51423759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ENSMUSG00000035293.14_2	chr12	+	2914	16	FSM	ENSMUSG00000035293.14	ENSMUST00000119211.8	2926	16	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCATCTCATAAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	51395079	51420047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_51395228_51398187_51398229_51400386_51400485_51400582_51400685_51402663_51402789_51403809_51403976_51406524_51406632_51407713_51407831_51409968_51410094_51410199_51410330_51410734_51410804_51412037_51412343_51414557_51414740_51415828_51416002_51418342_51418534_51419212
ENSMUSG00000035295.11_0	chr2	+	913	4	NNC	ENSMUSG00000035295.11	novel	1194	9	NA	NA	3261	4006	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAACCTGTGGGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	38891591	38895600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_38891774_38894111_38894201_38894743_38894880_38895094
ENSMUSG00000035296.15_0	chr14	-	3495	8	FSM	ENSMUSG00000035296.15	ENSMUST00000077954.13	3515	8	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCAGCACTCCCTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	61495926	61456570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61459226_61462643_61462768_61467020_61467094_61469854_61469975_61474256_61474345_61477790_61477893_61483204_61483403_61495791
ENSMUSG00000035297.15_0	chr5	+	1740	10	FSM	ENSMUSG00000035297.15	ENSMUST00000045993.15	1755	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGTGAGGTGTTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	100666183	100695663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685335_100689402_100689519_100691704_100691790_100695169
ENSMUSG00000035297.15_9	chr5	+	1643	10	FSM	ENSMUSG00000035297.15	ENST00000503682.5	1660	10	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAATAAAGGCAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	100666331	100695635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100666417_100675839_100675920_100676404_100676557_100677912_100678017_100681107_100681262_100681377_100681529_100685163_100685376_100689364_100689519_100691704_100691790_100695169
ENSMUSG00000035299.17_1	chrX	+	2340	10	FSM	ENSMUSG00000035299.17	ENST00000317552.9	2356	10	10	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCGACCTTGAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	168662611	168772193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_168662906_168709949_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858
ENSMUSG00000035299.17_16	chrX	+	2035	9	FSM	ENSMUSG00000035299.17	ENST00000380780.5	2053	9	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCGACCTTGAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	168709960	168772193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_168710666_168749058_168749155_168759917_168760026_168764880_168765030_168766951_168767080_168767994_168768139_168768931_168769094_168770554_168770763_168771858
ENSMUSG00000035311.17_0	chr10	+	5372	21	FSM	ENSMUSG00000035311.17	ENSMUST00000020251.10	5390	21	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGAGTTTATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	88215097	88283183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_88215398_88236513_88236600_88247777_88247898_88248466_88248509_88250254_88250461_88254986_88255052_88255287_88255423_88264354_88264517_88265322_88265503_88265701_88265873_88267194_88267319_88268302_88268507_88268910_88269951_88271863_88272064_88272213_88272434_88273296_88273411_88274989_88275076_88275312_88275412_88276085_88276254_88279170_88279262_88281624
ENSMUSG00000035314.11_0	chr7	+	4582	18	FSM	ENSMUSG00000035314.11	ENSMUST00000037528.10	4611	18	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAACAAAACGAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	99030630	99111065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_99031416_99036310_99036396_99059615_99059699_99073259_99073437_99087454_99087559_99090378_99090473_99091094_99091155_99097328_99097428_99097679_99097774_99098148_99098295_99100920_99101004_99102199_99102351_99102990_99103210_99103681_99103840_99104118_99104267_99105658_99105742_99107980_99108094_99109165
ENSMUSG00000035325.17_10	chr5	-	4162	27	FSM	ENSMUSG00000035325.17	ENST00000448323.5	4177	27	10	5	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACCCCATCTTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	100564081	100509522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUSG00000035325.17_176	chr5	-	3573	25	ISM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	832	0	832	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCAGCACTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	100555139	100509911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015
ENSMUSG00000035325.17_50	chr5	-	3649	26	FSM	ENSMUSG00000035325.17	ENST00000355196.6	3652	26	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCAGCACTGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	100555968	100509911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892
ENSMUSG00000035325.17_79	chr5	-	4118	27	FSM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAAAGTGTGTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	100555966	100509533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892
ENSMUSG00000035325.17_8	chr5	-	3820	26	FSM	ENSMUSG00000035325.17	ENST00000509142.5	3837	26	12	5	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAACCCCATCTTATACAG	NA	NA	NA	NA	NA	NA	NA	NA	100564075	100509522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892_100555973_100563961
ENSMUSG00000035325.17_84	chr5	-	4043	26	ISM	ENSMUSG00000035325.17	ENST00000505472.5	4133	27	833	10	833	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAAAGTGTGTAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	100555138	100509533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100523819_100523913_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100536392_100536471_100536926_100536966_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015
ENSMUSG00000035325.17_9	chr5	-	3927	24	FSM	ENSMUSG00000035325.17	ENST00000348405.8	3934	24	5	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCATCTTATACAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	100555971	100509519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100510090_100511235_100511308_100511686_100511807_100513589_100513854_100516152_100516212_100521238_100521575_100523066_100523191_100526686_100526861_100529018_100529193_100530620_100530767_100531655_100531783_100532982_100533162_100533986_100534063_100538617_100538693_100540253_100540488_100540721_100540875_100541061_100541224_100543660_100543761_100547205_100547349_100550073_100550215_100551873_100551970_100553302_100553502_100555015_100555140_100555892
ENSMUSG00000035329.8_0	chr12	-	529	2	FSM	ENSMUSG00000035329.8	ENST00000554190.1	546	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAACCAAATCGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	59265959	59249250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59249466_59265645
ENSMUSG00000035342.15_0	chr19	+	3044	5	FSM	ENSMUSG00000035342.15	ENSMUST00000039016.14	3062	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGGGAAAAAAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	45003314	45015462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45003763_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_1	chr19	+	2792	5	FSM	ENSMUSG00000035342.15	ENSMUST00000179108.9	2798	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCCATCTCTGCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	45003644	45015550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45003753_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_2	chr19	+	2689	5	FSM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAATTTGTTTGACATC	NA	NA	NA	NA	NA	NA	NA	NA	45006650	45015536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45006670_45009825_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035342.15_3	chr19	+	2656	4	ISM	ENSMUSG00000035342.15	ENSMUST00000178087.3	2694	5	3189	5	3189	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAATTTGTTTGACATC	NA	NA	NA	NA	NA	NA	NA	NA	45009839	45015536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_45010276_45011980_45012644_45013157_45013419_45014240
ENSMUSG00000035351.17_0	chr10	+	1250	10	FSM	ENSMUSG00000035351.17	ENSMUST00000052355.15	1267	10	7	10	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACATGAAAAATATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	87982860	88014242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87982935_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035351.17_4	chr10	+	1264	10	FSM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTACATGAAAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	87982940	88014239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_87983032_87984023_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035351.17_5	chr10	+	1174	9	ISM	ENSMUSG00000035351.17	ENSMUST00000169309.3	1277	10	1083	12	1083	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACTACATGAAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	87984021	88014238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_87984242_87989385_87989511_87994719_87994793_87996737_87996833_88007856_88007948_88010247_88010430_88010744_88010796_88012934_88013029_88013995
ENSMUSG00000035354.10_0	chr7	-	5138	15	FSM	ENSMUSG00000035354.10	ENSMUST00000037968.10	5157	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTTATTTTGAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	98790337	98534235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98537800_98555698_98555791_98589097_98589177_98628842_98629009_98637390_98637452_98638741_98638830_98641130_98641216_98653786_98653914_98665775_98665882_98715006_98715090_98737307_98737383_98748518_98748681_98758269_98758305_98767394_98767513_98790040
ENSMUSG00000035357.18_0	chr6	-	4081	10	FSM	ENSMUSG00000035357.18	ENSMUST00000075994.11	4104	10	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTCTGACATGGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	101354841	101126575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_101129030_101130179_101130297_101131154_101131257_101132830_101132894_101133874_101133974_101146094_101146183_101149160_101149409_101331354_101331463_101339099_101339187_101354126
ENSMUSG00000035365.16_0	chr10	-	3567	11	FSM	ENSMUSG00000035365.16	ENSMUST00000048518.16	3594	11	12	15	12	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAAAGTTTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87982791	87927308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_87929049_87929456_87929590_87946160_87946243_87947457_87947637_87950382_87950564_87960669_87960825_87962018_87962190_87968955_87969061_87975727_87975959_87979801_87979958_87982357
ENSMUSG00000035367.10_0	chr13	+	3583	3	FSM	ENSMUSG00000035367.10	ENSMUST00000225828.2	3594	3	9	2	-6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTTGCCGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	58550070	58558956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58550332_58554815_58554905_58555723
ENSMUSG00000035367.10_1	chr13	+	3830	3	FSM	ENSMUSG00000035367.10	ENSMUST00000042450.10	3855	3	19	6	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTTGCCGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	58550095	58558956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58550604_58554815_58554905_58555723
ENSMUSG00000035367.10_4	chr13	+	2439	4	FSM	ENSMUSG00000035367.10	ENSMUST00000225815.2	2447	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAATCAAAATATGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	58550513	58557898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58550604_58552384_58552470_58554815_58554905_58555723
ENSMUSG00000035367.10_7	chr13	+	4200	2	FSM	ENSMUSG00000035367.10	ENSMUST00000224479.2	4212	2	4	8	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCAAAATATGTGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	58552883	58557902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58554905_58555723
ENSMUSG00000035370.10_0	chr10	+	1331	1	ISM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	3437	7	3437	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGTTGCCGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	80442150	80443481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_80442200_80443500
ENSMUSG00000035372.3_0	chr19	+	1874	4	FSM	ENSMUSG00000035372.3	ENSMUST00000039048.2	1882	4	8	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3758340	3767881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3758437_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_5	chr19	+	1870	4	FSM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTTGTGTGGGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3758415	3767880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3758509_3764403_3764626_3765637_3765803_3766490
ENSMUSG00000035372.3_6	chr19	+	1779	3	ISM	ENSMUSG00000035372.3	ENSMUST00000235837.2	1875	4	5992	-1	5992	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGGGTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3764402	3767881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_3764626_3765637_3765803_3766490
ENSMUSG00000035373.3_0	chr11	+	785	3	FSM	ENSMUSG00000035373.3	ENSMUST00000021011.3	801	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATTCAATCTCTGATG	NA	NA	NA	NA	NA	NA	NA	NA	81936547	81938345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_81936686_81937343_81937456_81937810
ENSMUSG00000035376.11_0	chr16	+	3591	7	FSM	ENSMUSG00000035376.11	ENSMUST00000061156.10	3598	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGATCTGGAGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	34842804	34929547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_34843006_34846194_34846313_34869089_34869109_34895975_34896065_34920125_34920248_34922315_34922495_34926684
ENSMUSG00000035378.18_0	chr6	-	6790	11	FSM	ENSMUSG00000035378.18	ENSMUST00000170667.8	1990	11	14	-4814	-4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAAAACAGAGACCCCT	NA	NA	NA	NA	NA	NA	NA	NA	100648104	100545228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_100550750_100588696_100588818_100607843_100607968_100609199_100609254_100613928_100614084_100625124_100625253_100632219_100632333_100641387_100641549_100642266_100642390_100646660_100646726_100647879
ENSMUSG00000035382.10_0	chr9	+	3850	17	FSM	ENSMUSG00000035382.10	ENSMUST00000039059.8	3876	17	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAGAAGTATAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45817806	45840996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45818338_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035382.10_3	chr9	+	3578	17	FSM	ENSMUSG00000035382.10	ENSMUST00000216672.2	3599	17	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAACATTTTGTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	45818296	45840950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45818602_45819825_45819950_45820557_45821035_45821672_45821808_45822381_45822548_45824248_45824340_45825627_45825683_45826385_45826525_45827285_45827387_45830059_45830228_45830543_45830652_45831089_45831193_45837208_45837366_45838031_45838127_45838872_45838967_45839184_45839303_45839808
ENSMUSG00000035385.6_0	chr11	+	796	3	FSM	ENSMUSG00000035385.6	ENSMUST00000000193.6	813	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCAGTCTGACTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	81926407	81928273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_81926564_81927308_81927427_81927751
ENSMUSG00000035392.18_0	chr2	-	4332	22	FSM	ENSMUSG00000035392.18	ENSMUST00000102787.10	4342	22	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACAGACTGACCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	38177387	37689012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37691263_37692026_37692286_37706927_37707017_37734788_37734921_37742407_37742465_37744004_37744077_37746127_37746169_37748029_37748118_37748379_37748485_37826630_37826757_37851652_37851755_37873071_37873118_37893385_37893487_37911367_37911479_37929163_37929218_37933350_37933432_37938736_37938807_38016540_38016661_38026937_38026988_38049818_38049863_38133413_38133485_38177124
ENSMUSG00000035397.9_0	chr10	-	2664	2	FSM	ENSMUSG00000035397.9	ENSMUST00000038558.9	2674	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACCTGCCCTTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	80413150	80402962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80405057_80412580
ENSMUSG00000035399.13_0	chr2	-	1605	4	FSM	ENSMUSG00000035399.13	ENSMUST00000046908.10	1620	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGGTATTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	163261440	163247748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163249010_163253316_163253431_163257454_163257576_163261331
ENSMUSG00000035401.10_0	chr7	-	7678	20	FSM	ENSMUSG00000035401.10	ENSMUST00000205276.2	7693	20	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTATGGTGAATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	98305977	98236349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950_98304060_98305680
ENSMUSG00000035401.10_11	chr7	-	4030	20	FSM	ENSMUSG00000035401.10	ENST00000525919.5	4045	20	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAACTTAAAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	98304052	98239846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98295655_98295731_98297011_98297112_98303950
ENSMUSG00000035401.10_9	chr7	-	4071	21	FSM	ENSMUSG00000035401.10	ENST00000524767.5	4087	21	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAAACTTAAAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	98304051	98239846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98240092_98242537_98243018_98243958_98244520_98246239_98246392_98248958_98249001_98249878_98250035_98251789_98251955_98259873_98260073_98262190_98262365_98264682_98264820_98268505_98268677_98270597_98270748_98275672_98275928_98279337_98279615_98286467_98286728_98288937_98289091_98290699_98290876_98294373_98294416_98295655_98295731_98297011_98297112_98303950
ENSMUSG00000035413.9_0	chr11	+	1620	7	FSM	ENSMUSG00000035413.9	ENSMUST00000040865.9	1633	7	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTGTAGTTACCGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	80701011	80712857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80701286_80703331_80703516_80705044_80705177_80706491_80706526_80708328_80708445_80710755_80710816_80712037
ENSMUSG00000035420.8_1	chr18	+	837	2	FSM	ENSMUSG00000035420.8	ENST00000620555.4	851	2	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGAGCATGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	50411681	50415315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_50411761_50414557
ENSMUSG00000035420.8_3	chr18	+	760	1	NIC	ENSMUSG00000035420.8	novel	1343	4	NA	NA	2879	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	273	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGAGCATGGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	50414555	50415315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_+_50414600_50415300
ENSMUSG00000035435.18_0	chr17	-	2174	12	FSM	ENSMUSG00000035435.18	ENST00000469908.5	2192	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGAGTGTGCCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	24547750	24484180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24484252_24484396_24484588_24486523_24486712_24507969_24508175_24508309_24508584_24510526_24510834_24514058_24514222_24515237_24515337_24519264_24519421_24526419_24526575_24546612_24546730_24547502
ENSMUSG00000035437.16_0	chr2	+	4937	26	FSM	ENSMUSG00000035437.16	ENSMUST00000061179.12	4967	26	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAACAGCATTGCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	37333318	37456441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_37333469_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUSG00000035437.16_3	chr2	+	4224	19	FSM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	3	20	3	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	37342259	37434954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114
ENSMUSG00000035437.16_5	chr2	+	4839	26	FSM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAGTAGTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	37342278	37456458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_37342314_37359388_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUSG00000035437.16_8	chr2	+	4177	18	ISM	ENSMUSG00000035437.16	ENSMUST00000066055.10	4247	19	17129	16	17107	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATATAA	NA	NA	NA	NA	NA	NA	NA	NA	37359385	37434958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114
ENSMUSG00000035437.16_9	chr2	+	4790	25	ISM	ENSMUSG00000035437.16	ENSMUST00000112920.2	4847	26	17124	8	17124	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAAAGTAGTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	37359402	37456458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_37359589_37362306_37362527_37363590_37363796_37365303_37365479_37373739_37373898_37377077_37377189_37377523_37377591_37379742_37379846_37381921_37382092_37385594_37385770_37392879_37392974_37398939_37399091_37422527_37422642_37427313_37427389_37430428_37430555_37431044_37431189_37432648_37432691_37433114_37433244_37445717_37445811_37446207_37446319_37450486_37450592_37451380_37451465_37451903_37451976_37453447_37453646_37454776
ENSMUSG00000035439.14_0	chr8	-	2000	11	FSM	ENSMUSG00000035439.14	ENSMUST00000035960.13	2013	11	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAGTACAGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	71725571	71703774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709199_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035439.14_1	chr8	-	1411	11	FSM	ENSMUSG00000035439.14	ENSMUST00000110071.3	1452	11	35	6	35	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGAGTACAGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	71724985	71703774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71704189_71705714_71705899_71707164_71707307_71708050_71708210_71708290_71708357_71708651_71708765_71709102_71709196_71709999_71710070_71715695_71715749_71721869_71721929_71724927
ENSMUSG00000035441.15_0	chr11	-	5318	22	FSM	ENSMUSG00000035441.15	ENSMUST00000041065.14	5354	22	20	16	20	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTAAATCTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	80670831	80372967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80375209_80448259_80448415_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
ENSMUSG00000035441.15_2	chr11	-	3082	21	FSM	ENSMUSG00000035441.15	ENSMUST00000070997.6	3106	21	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAATATTAAGCCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	80670834	80474659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80474817_80477672_80477787_80483612_80483718_80484564_80484710_80492408_80492633_80528699_80528908_80531044_80531212_80548218_80548352_80553866_80553942_80557400_80557472_80561674_80561846_80565439_80565555_80565642_80565789_80566876_80567081_80567647_80567765_80570845_80570942_80573207_80573262_80575150_80575317_80576675_80576770_80583706_80583916_80670523
ENSMUSG00000035443.11_0	chr9	+	766	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGACAAGGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	26911006	26918618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUSG00000035443.11_1	chr9	+	867	7	FSM	ENSMUSG00000035443.11	ENSMUST00000213683.2	1107	7	230	10	228	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAAGGTTGGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26911245	26918622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUSG00000035443.11_2	chr9	+	910	8	FSM	ENSMUSG00000035443.11	ENSMUST00000039161.10	918	8	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACAAGGTTGGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26911017	26918622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_26911062_26911246_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918096_26918248_26918453
ENSMUSG00000035443.11_6	chr9	+	703	6	ISM	ENSMUSG00000035443.11	ENSMUST00000213770.2	775	7	249	8	237	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATGACAAGGTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	26911254	26918618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_26911353_26914892_26915075_26916441_26916511_26916852_26916946_26917647_26917744_26918453
ENSMUSG00000035455.13_0	chr11	-	2890	2	ISM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	2747	3	2720	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTTTTGTAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11756212	11750290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_11753064_11756095
ENSMUSG00000035455.13_1	chr11	-	2954	3	FSM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTATGCTTTTGTAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	11758956	11750291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11753064_11756095_11756216_11758894
ENSMUSG00000035455.13_2	chr11	-	2836	2	FSM	ENSMUSG00000035455.13	ENSMUST00000171080.8	2844	2	5	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTTTTGTAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11758957	11750290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11753064_11758894
ENSMUSG00000035455.13_3	chr11	-	2960	3	FSM	ENSMUSG00000035455.13	ENSMUST00000171938.2	2974	3	11	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTTTTGTAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11758951	11750290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_11753064_11756095_11756216_11758884
ENSMUSG00000035455.13_4	chr11	-	2773	1	ISM	ENSMUSG00000035455.13	ENSMUST00000047689.11	2961	3	5896	3	5869	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATGCTTTTGTAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	11753063	11750290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_11750300_11753100
ENSMUSG00000035458.16_0	chr7	-	892	8	FSM	ENSMUSG00000035458.16	ENSMUST00000098859.10	912	8	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGAAGGAACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4525516	4521312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525068_4525082_4525303
ENSMUSG00000035458.16_2	chr7	-	853	7	NIC	ENSMUSG00000035458.16	novel	912	8	NA	NA	37	-9	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGAAGGAACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4525490	4521312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_4521451_4522396_4522574_4523436_4523527_4523961_4524094_4524343_4524386_4524814_4524902_4525303
ENSMUSG00000035469.18_0	chr14	+	3885	12	FSM	ENSMUSG00000035469.18	ENSMUST00000043227.13	3903	12	12	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACACTTGTACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59438688	59474708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_59439034_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035469.18_2	chr14	+	3943	13	FSM	ENSMUSG00000035469.18	ENSMUST00000022551.14	3957	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACACTTGTACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59438698	59474708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_59439034_59447191_59447260_59447373_59447544_59447883_59448035_59455044_59455212_59458865_59459025_59460641_59460750_59462081_59462225_59463756_59463948_59465703_59465831_59467335_59467488_59467858_59467990_59472667
ENSMUSG00000035473.11_0	chr17	+	2301	7	FSM	ENSMUSG00000035473.11	ENSMUST00000039205.11	2314	7	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGACTCTTGTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	80434912	80492530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_80435335_80445441_80445597_80452408_80452616_80457517_80457600_80488989_80489132_80490620_80490796_80491412
ENSMUSG00000035476.10_1	chrX	+	3182	7	FSM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTGAAAAAAAATCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	84641673	84675147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_84641709_84652995_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035476.10_6	chrX	+	3137	6	ISM	ENSMUSG00000035476.10	ENST00000378932.6	3190	7	11332	8	11332	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTGAAAAAAAATCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	84653005	84675147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_84653191_84657576_84659036_84659979_84660141_84665159_84665254_84671765_84671868_84674011
ENSMUSG00000035478.15_0	chr10	-	1552	7	FSM	ENSMUSG00000035478.15	ENSMUST00000105349.8	1566	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTCTGACTTGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	80235374	80228376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80235051
ENSMUSG00000035478.15_1	chr10	-	1649	7	FSM	ENSMUSG00000035478.15	ENSMUST00000092295.10	1662	7	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGACTTGTCACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	80235373	80228374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80228853_80228928_80229115_80229726_80229905_80230399_80230491_80230897_80231036_80231269_80231430_80234955
ENSMUSG00000035493.11_0	chr13	+	2679	17	FSM	ENSMUSG00000035493.11	ENSMUST00000045173.10	2714	17	23	12	23	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAACAAACACCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	56757421	56787159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_56757594_56762052_56762152_56771372_56771438_56773012_56773174_56773462_56773628_56773846_56773994_56775726_56775869_56777430_56777644_56778356_56778495_56779042_56779189_56779862_56780000_56780671_56780803_56783378_56783504_56784378_56784482_56784950_56785031_56785833_56785859_56786529
ENSMUSG00000035495.16_0	chr4	-	3716	10	FSM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46138468	46114748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386_46135595_46138379
ENSMUSG00000035495.16_1	chr4	-	3628	9	ISM	ENSMUSG00000035495.16	ENSMUST00000107772.8	3726	10	2880	3	2843	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTAGGTGGGAAGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	46135595	46114748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_46117084_46119142_46119282_46119840_46120000_46120447_46120567_46124042_46124149_46124899_46125026_46129226_46129348_46131842_46132157_46135386
ENSMUSG00000035504.17_0	chr10	+	2117	5	FSM	ENSMUSG00000035504.17	ENSMUST00000105357.2	2127	5	3	7	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCACGAGTGTGTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	80165789	80172268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80166180_80169336_80169431_80169522_80169662_80169799_80169969_80170943
ENSMUSG00000035505.15_0	chr5	-	1285	6	FSM	ENSMUSG00000035505.15	ENSMUST00000118816.6	1307	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAAGGCTCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	90371817	90362590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90363035_90365375_90365484_90366770_90366896_90367218_90367383_90370089_90370191_90371474
ENSMUSG00000035505.15_1	chr5	-	1316	6	FSM	ENSMUSG00000035505.15	ENSMUST00000048363.10	1333	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTAAAGGCTCTGGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	90371851	90362590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90363035_90365375_90365484_90366770_90366893_90367218_90367383_90370089_90370191_90371474
ENSMUSG00000035509.18_0	chr13	+	1352	6	FSM	ENSMUSG00000035509.18	ENST00000467490.5	1375	6	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATAAATAAGTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	56674945	56693579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_56675095_56675530_56675654_56680105_56680419_56684449_56684771_56685377_56685575_56693330
ENSMUSG00000035517.18_1	chr4	+	3631	17	FSM	ENSMUSG00000035517.18	ENSMUST00000107777.9	3655	17	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATATAAAACCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	45965345	46034749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45965477_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
ENSMUSG00000035517.18_10	chr4	+	3698	17	FSM	ENSMUSG00000035517.18	ENSMUST00000102929.2	3716	17	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATATAAAACCTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	45972238	46034749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45972437_45987461_45987675_45989077_45989220_45990049_45990231_45992196_45992271_45994306_45994525_46005116_46005701_46007454_46007642_46010789_46010902_46013065_46013269_46016868_46017004_46018529_46018617_46020804_46020940_46023394_46023506_46025656_46026160_46029646_46029808_46034295
ENSMUSG00000035521.14_0	chr17	-	2241	11	FSM	ENSMUSG00000035521.14	ENSMUST00000115154.11	2249	11	4	4	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGATAAAAATGTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	25459094	25452308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454455_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUSG00000035521.14_25	chr17	-	1140	11	FSM	ENSMUSG00000035521.14	ENST00000683887.1	1143	11	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATTATAAATATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	25458945	25453280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454929_25458748_25458817_25458887
ENSMUSG00000035521.14_26	chr17	-	1075	10	ISM	ENSMUSG00000035521.14	ENST00000683887.1	1143	11	136	3	136	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTATTATAAATATGACC	NA	NA	NA	NA	NA	NA	NA	NA	25458810	25453281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454929_25458748
ENSMUSG00000035521.14_3	chr17	-	1196	11	FSM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCACATGCGCATCCATA	NA	NA	NA	NA	NA	NA	NA	NA	25458945	25453180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887
ENSMUSG00000035521.14_4	chr17	-	1131	10	ISM	ENSMUSG00000035521.14	ENST00000204679.9	1204	11	137	7	137	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCACATGCGCATCCATA	NA	NA	NA	NA	NA	NA	NA	NA	25458809	25453180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_25453465_25453555_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748
ENSMUSG00000035521.14_41	chr17	-	1223	11	FSM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCACTAAAGTAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	25459090	25453301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887_25458946_25459033
ENSMUSG00000035521.14_42	chr17	-	1158	10	ISM	ENSMUSG00000035521.14	ENSMUST00000038973.7	1234	11	151	13	7	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATTCACTAAAGTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	25458939	25453303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_25453697_25453781_25453864_25453953_25454086_25454155_25454239_25454318_25454434_25454507_25454602_25454678_25454763_25454829_25454885_25458748_25458817_25458887
ENSMUSG00000035529.11_0	chr10	-	3951	12	FSM	ENSMUSG00000035529.11	ENSMUST00000220032.2	3962	12	3	8	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATGGAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85752847	85727837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740135_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ENSMUSG00000035529.11_1	chr10	-	3866	12	FSM	ENSMUSG00000035529.11	ENSMUST00000037646.9	3877	12	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATATGGAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	85752783	85727837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_85729304_85735038_85735208_85736705_85737021_85737567_85737696_85738790_85738877_85739994_85740114_85741212_85741363_85743139_85743935_85746086_85746273_85748701_85748836_85752387_85752594_85752671
ENSMUSG00000035530.14_0	chr11	+	1307	4	FSM	ENSMUSG00000035530.14	ENSMUST00000049385.14	1322	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7906	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACGCCTGATGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	100210719	100212916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100210987_100211491_100211656_100211773_100211876_100212142
ENSMUSG00000035545.14_0	chr7	+	3597	16	FSM	ENSMUSG00000035545.14	ENSMUST00000121270.8	3620	16	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCGAGAACCTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	4140076	4151160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4140155_4141694_4141788_4142417_4142590_4142934_4143043_4144021_4144133_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264_4148473_4149939
ENSMUSG00000035545.14_1	chr7	+	2183	13	FSM	ENSMUSG00000035545.14	ENST00000376514.6	2196	13	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCACTGCACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4141700	4148474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4141788_4142417_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ENSMUSG00000035545.14_7	chr7	+	2097	12	ISM	ENSMUSG00000035545.14	ENST00000376514.6	2196	13	723	6	723	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCACTGCACTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	4142416	4148474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_4142590_4142934_4143043_4145030_4145284_4145495_4145638_4145832_4146037_4146417_4146697_4146786_4146928_4147051_4147338_4147710_4147813_4147893_4147963_4148053_4148184_4148264
ENSMUSG00000035547.15_0	chr7	-	4489	13	FSM	ENSMUSG00000035547.15	ENSMUST00000040971.14	4498	13	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGATCTGTCTGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	97827479	97770772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801151_97811122_97811318_97827250
ENSMUSG00000035547.15_4	chr7	-	2347	12	FSM	ENSMUSG00000035547.15	ENST00000456580.6	2370	12	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCCATGTCCCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	97811300	97772751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97773263_97774448_97774586_97775035_97775152_97775452_97775650_97777679_97777803_97778450_97778647_97780397_97780476_97780882_97781077_97782039_97782233_97784966_97785176_97801018_97801228_97811116
ENSMUSG00000035551.7_0	chr4	-	962	5	FSM	ENSMUSG00000035551.7	ENSMUST00000044297.7	2864	5	157	1745	13	-897	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTGGAGGGGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	45826766	45811212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45811381_45813392_45813551_45815471_45815589_45816277_45816388_45826357
ENSMUSG00000035559.10_0	chr8	-	962	5	FSM	ENSMUSG00000035559.10	ENSMUST00000038626.10	980	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAAGGACTGCGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71213582	71211302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71211671_71211754_71211884_71212036_71212114_71213013_71213185_71213365
ENSMUSG00000035569.18_0	chr8	-	9137	12	FSM	ENSMUSG00000035569.18	ENST00000301030.10	9166	12	12	17	12	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATTAATTAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	123768981	123610092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642841_123768687
ENSMUSG00000035569.18_13	chr8	-	7977	12	NIC	ENSMUSG00000035569.18	novel	7995	13	NA	NA	3	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATGACACTCGGAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	123642723	123610896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626544_123626717_123626923_123629162_123629187_123635406_123635546_123642639
ENSMUSG00000035569.18_19	chr8	-	929	6	FSM	ENSMUSG00000035569.18	ENST00000642695.1	929	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCTCCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123768745	123625299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642841_123768687
ENSMUSG00000035569.18_20	chr8	-	869	5	ISM	ENSMUSG00000035569.18	ENST00000642695.1	929	6	125907	0	-112	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCCCTCCAGTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	123642838	123625299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639
ENSMUSG00000035569.18_9	chr8	-	8451	13	FSM	ENSMUSG00000035569.18	ENSMUST00000098334.13	8455	13	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGAGTGTTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	123768758	123610563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123611076_123612388_123612482_123614052_123614197_123614266_123614366_123616377_123622896_123623298_123623447_123625312_123625456_123626342_123626547_123626717_123626889_123635406_123635546_123642639_123642785_123701467_123701532_123768687
ENSMUSG00000035572.17_0	chr4	+	7235	7	FSM	ENSMUSG00000035572.17	ENSMUST00000155551.8	7250	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAATCCAGAATGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45342110	45379754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45342728_45348105_45348220_45359760_45359959_45370305_45370509_45372663_45372775_45372923_45373070_45373908
ENSMUSG00000035575.12_0	chr11	-	2296	20	FSM	ENSMUSG00000035575.12	ENSMUST00000108241.8	2308	20	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGTCTAGCCTGGTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	79853201	79823154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79823541_79826730_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUSG00000035575.12_2	chr11	-	3853	19	FSM	ENSMUSG00000035575.12	ENSMUST00000043152.6	3877	19	13	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAACTCATTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	79853203	79824789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79826936_79828498_79828572_79831719_79831787_79832703_79832814_79832952_79833034_79834056_79834237_79836604_79836683_79837031_79837112_79839716_79839902_79841595_79841678_79842424_79842507_79844402_79844481_79846436_79846556_79847562_79847627_79848166_79848215_79849611_79849705_79849934_79849977_79851572_79851658_79853043
ENSMUSG00000035576.14_0	chr2	+	1847	17	FSM	ENSMUSG00000035576.14	ENST00000422861.3	1865	17	13	5	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTGGGGGCGGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	162790701	162816441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162790808_162791377_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809171_162809370_162809476_162809527_162812081_162812240_162813085_162813149_162816307
ENSMUSG00000035576.14_5	chr2	+	1979	17	FSM	ENSMUSG00000035576.14	ENST00000373134.5	1993	17	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATGGTTGCCTGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	162790696	162818392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_162790808_162791377_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809156_162809370_162809476_162809527_162812081_162812240_162813085_162813374_162818371
ENSMUSG00000035576.14_6	chr2	+	1950	16	ISM	ENSMUSG00000035576.14	ENST00000373134.5	1993	17	16	5025	16	-3069	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGAATTGAAACATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	162790704	162813373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_162790808_162791377_162791460_162801442_162801525_162802000_162802106_162802866_162803003_162803322_162803415_162806346_162806499_162806921_162806999_162807688_162807775_162807917_162808029_162808465_162808581_162808905_162809006_162809156_162809370_162809476_162809527_162812081_162812240_162813085
ENSMUSG00000035578.17_0	chr16	-	5546	10	ISM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	2515	13	2515	-13	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAACGAAAAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32874045	32833065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993
ENSMUSG00000035578.17_1	chr16	-	5605	11	FSM	ENSMUSG00000035578.17	ENSMUST00000115100.9	5618	11	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAACGAAAAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32876560	32833065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_32837434_32839810_32839913_32840883_32841016_32849384_32849460_32851144_32851307_32855910_32855993_32861133_32861263_32865889_32866072_32870221_32870484_32873993_32874065_32876520
ENSMUSG00000035585.17_0	chr7	+	1760	5	FSM	ENSMUSG00000035585.17	ENSMUST00000108630.8	1779	5	12	7	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAGTCCTTACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	3696385	3704016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035585.17_3	chr7	+	1363	6	FSM	ENSMUSG00000035585.17	ENSMUST00000205287.2	1375	6	5	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTACCTGTGTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3696766	3703879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3696889_3697596_3697844_3697976_3698227_3698350_3698621_3698711_3698833_3703526
ENSMUSG00000035585.17_6	chr7	+	1308	4	FSM	ENSMUSG00000035585.17	ENSMUST00000108627.4	1319	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATGTTTGTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3697532	3704003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3697844_3697976_3698227_3698350_3698621_3703526
ENSMUSG00000035585.17_7	chr7	+	911	4	FSM	ENSMUSG00000035585.17	ENST00000665674.2	924	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGCTGGAGACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3697602	3703709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3697844_3697976_3698227_3698383_3698621_3703526
ENSMUSG00000035594.11_0	chr9	+	612	6	FSM	ENSMUSG00000035594.11	ENST00000559554.5	636	6	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAGTGAAACCAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	54888897	54913849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54889006_54905295_54905448_54907735_54907781_54909683_54909794_54911614_54911660_54913697
ENSMUSG00000035595.7_0	chr10	+	652	3	FSM	ENSMUSG00000035595.7	ENSMUST00000041882.7	678	3	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCACACTCAGGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80008795	80010972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80009009_80010042_80010160_80010650
ENSMUSG00000035596.15_0	chr7	-	2859	8	FSM	ENSMUSG00000035596.15	ENSMUST00000038608.14	2878	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGCATTTGTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	3696512	3680796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3681849_3686807_3686985_3688672_3689034_3691521_3691682_3694260_3694388_3694804_3694935_3695038_3695118_3695739
ENSMUSG00000035597.20_0	chr12	+	4052	14	FSM	ENSMUSG00000035597.20	ENSMUST00000120580.8	4069	14	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACATTATTTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65083113	65110150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_65083243_65089234_65089582_65090005_65090132_65090779_65090899_65094886_65095055_65100059_65100226_65100744_65100853_65101929_65102095_65102411_65102539_65103024_65103294_65104502_65104688_65106644_65106720_65107924_65108040_65108197
ENSMUSG00000035601.10_0	chr4	+	2057	9	FSM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATCTAAGGAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	45297127	45316125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45297196_45300416_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035601.10_4	chr4	+	1984	8	ISM	ENSMUSG00000035601.10	ENSMUST00000044673.9	2064	9	3292	9	-15	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTACATCTAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45300418	45316122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_45300628_45301235_45301351_45304263_45304389_45305743_45305897_45307891_45307971_45308496_45308565_45314282_45314407_45315011
ENSMUSG00000035606.9_0	chr9	+	1986	10	FSM	ENSMUSG00000035606.9	ENST00000503669.1	1993	10	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATCTCCCTGCTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	102383287	102420117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_102383478_102386309_102386373_102390171_102390235_102398487_102398563_102400516_102400580_102402596_102402680_102403894_102404004_102405098_102405217_102414799_102414989_102419084
ENSMUSG00000035614.12_0	chr12	+	6419	20	FSM	ENSMUSG00000035614.12	ENST00000361462.7	6435	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTAGATGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	65012523	65069338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027666_65029219_65029483_65030101_65030341_65033166_65033265_65039328_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035614.12_9	chr12	+	6375	21	FSM	ENSMUSG00000035614.12	ENSMUST00000223166.2	6386	21	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGTGACAGGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	65012723	65069346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_65014803_65023468_65023626_65024942_65025078_65027356_65027654_65029219_65029483_65030101_65030341_65033166_65033265_65037714_65037865_65039318_65039415_65042279_65042456_65043665_65043820_65049381_65049536_65053092_65053199_65053648_65053885_65055323_65055483_65057886_65058014_65059608_65059728_65063254_65063445_65065905_65066126_65067087_65067175_65068213
ENSMUSG00000035615.13_0	chr4	+	4805	16	FSM	ENSMUSG00000035615.13	ENSMUST00000044773.12	4812	16	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTGTCTTGTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	45184905	45285929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45184958_45229830_45229936_45243629_45243788_45244571_45244675_45249173_45249220_45256841_45256950_45261832_45261929_45268468_45268595_45269899_45270020_45271129_45271267_45273077_45273205_45273358_45273455_45274311_45274495_45275249_45275398_45278825_45279642_45283545
ENSMUSG00000035615.13_2	chr4	+	5233	16	FSM	ENSMUSG00000035615.13	ENSMUST00000107804.2	5241	16	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTGCCTTTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45203932	45285936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_45204406_45229830_45229936_45243629_45243788_45244571_45244675_45249173_45249220_45256841_45256950_45261832_45261929_45268468_45268595_45269899_45270020_45271129_45271267_45273077_45273205_45273358_45273455_45274311_45274495_45275249_45275398_45278825_45279642_45283545
ENSMUSG00000035615.13_3	chr4	+	4757	15	ISM	ENSMUSG00000035615.13	ENSMUST00000107804.2	5241	16	25909	0	25909	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTGCCTTTCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	45229833	45285936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_45229936_45243629_45243788_45244571_45244675_45249173_45249220_45256841_45256950_45261832_45261929_45268468_45268595_45269899_45270020_45271129_45271267_45273077_45273205_45273358_45273455_45274311_45274495_45275249_45275398_45278825_45279642_45283545
ENSMUSG00000035620.16_0	chr10	+	3049	10	FSM	ENSMUSG00000035620.16	ENSMUST00000038523.15	3069	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGCCATCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84753493	84852305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84837645_84837766_84850939
ENSMUSG00000035620.16_1	chr10	+	2881	9	FSM	ENSMUSG00000035620.16	ENSMUST00000095385.5	2909	9	22	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGCCATCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84753541	84852305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84753690_84761409_84761458_84783275_84783885_84793879_84793975_84805726_84805956_84806592_84806689_84815911_84816057_84827983_84828129_84850939
ENSMUSG00000035620.16_2	chr10	+	569	3	FSM	ENSMUSG00000035620.16	ENST00000549643.5	576	3	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACATTGAGGCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	84753547	84851221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84753690_84827983_84828129_84850939
ENSMUSG00000035621.14_0	chr10	+	3584	8	FSM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGACCTCTTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79984111	79994194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ENSMUSG00000035621.14_1	chr10	+	3719	9	FSM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	0	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGACCTCTTGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79984105	79994194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79984184_79985515_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ENSMUSG00000035621.14_2	chr10	+	3646	8	ISM	ENSMUSG00000035621.14	ENSMUST00000042057.12	3727	9	1409	4	1409	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACCTCTTGCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	79985514	79994198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_79986148_79987211_79987300_79987494_79987558_79989424_79989554_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ENSMUSG00000035621.14_3	chr10	+	3507	7	ISM	ENSMUSG00000035621.14	ENSMUST00000099492.10	3597	8	1409	13	1409	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGACATGACCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79985514	79994188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_79986148_79987211_79987300_79987494_79987558_79989649_79989968_79990164_79990307_79990967_79991241_79992198
ENSMUSG00000035623.15_0	chr7	+	11107	16	FSM	ENSMUSG00000035623.15	ENSMUST00000107153.3	11124	16	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAGTTGATGTACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	97229109	97341974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97229313_97266049_97266142_97285583_97285677_97288511_97288718_97302259_97302415_97310019_97311789_97313766_97313974_97318975_97319081_97320009_97320090_97323787_97323843_97325362_97325473_97326551_97326620_97328141_97328350_97329825_97330050_97330905_97331095_97334631
ENSMUSG00000035629.20_3	chr16	-	5296	20	FSM	ENSMUSG00000035629.20	ENSMUST00000089684.10	5311	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTTGACGACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	32688700	32642082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ENSMUSG00000035629.20_6	chr16	-	5224	19	FSM	ENSMUSG00000035629.20	ENSMUST00000040986.15	5257	19	16	17	4	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTAAGGAAAATAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	32688705	32642114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32688462
ENSMUSG00000035629.20_8	chr16	-	3121	21	FSM	ENSMUSG00000035629.20	ENST00000273582.9	3138	21	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCACTAAGCCCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	32697854	32644335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_32644517_32644748_32644843_32645933_32646088_32646504_32646567_32647054_32647294_32647657_32647723_32648228_32648375_32649038_32649172_32649634_32649693_32656283_32656386_32656779_32656991_32658607_32658724_32659536_32659631_32661906_32661952_32663367_32663902_32664916_32665077_32667586_32667694_32668199_32668360_32670047_32670132_32677261_32677416_32697632
ENSMUSG00000035632.17_0	chr7	+	4143	17	FSM	ENSMUSG00000035632.17	ENST00000617930.2	4160	17	11	6	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACGGCTGGCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3648318	3664093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661824_3662379
ENSMUSG00000035632.17_5	chr7	+	2815	18	FSM	ENSMUSG00000035632.17	ENSMUST00000038913.16	2822	18	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGGCCTCTCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	3648356	3664107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3648584_3653799_3653875_3653979_3654048_3654266_3654342_3654492_3654583_3654806_3654936_3655031_3655128_3656198_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661741_3662379_3662506_3663726
ENSMUSG00000035632.17_6	chr7	+	2680	13	FSM	ENSMUSG00000035632.17	ENST00000447684.5	2693	13	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGACGGCTGGCAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	3654813	3664093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3654936_3655031_3655128_3656143_3656419_3656509_3656644_3657141_3657199_3658569_3658952_3659031_3659156_3659785_3659985_3660999_3661100_3661191_3661391_3661607_3661903_3662175_3662506_3663726
ENSMUSG00000035637.15_0	chr4	+	1259	9	FSM	ENSMUSG00000035637.15	ENSMUST00000045078.13	1280	9	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAACAAAGAGCATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44981403	44990722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44981535_44982878_44983010_44983873_44983947_44984429_44984547_44985306_44985396_44986285_44986391_44987215_44987352_44988919_44989051_44990376
ENSMUSG00000035642.17_0	chr7	-	760	4	FSM	ENSMUSG00000035642.17	ENSMUST00000136757.8	789	4	18	11	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAGTTGAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	97228686	97199548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97228572
ENSMUSG00000035642.17_1	chr7	-	869	5	FSM	ENSMUSG00000035642.17	ENSMUST00000154853.8	883	5	5	9	5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGCCAAAGAGAAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	97228698	97199555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97199949_97207337_97207434_97214357_97214508_97224794_97224899_97228572
ENSMUSG00000035642.17_2	chr7	-	518	3	FSM	ENSMUSG00000035642.17	ENST00000533193.5	537	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAATCAGACCACAAA	NA	NA	NA	NA	NA	NA	NA	NA	97214489	97199792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97199949_97207337_97207463_97214252
ENSMUSG00000035649.18_0	chr4	+	2491	9	FSM	ENSMUSG00000035649.18	ENSMUST00000107824.9	2503	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCATGTGTAAATAAATG	NA	NA	NA	NA	NA	NA	NA	NA	44756573	44932197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44756693_44761849_44762475_44893532_44893571_44894915_44895042_44895818_44895990_44908450_44908487_44925974_44926071_44929117_44929236_44931035
ENSMUSG00000035649.18_4	chr4	+	838	2	FSM	ENSMUSG00000035649.18	ENST00000322831.6	858	2	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTAGTGTCGTATTGAC	NA	NA	NA	NA	NA	NA	NA	NA	44756689	44762471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44756831_44761774
ENSMUSG00000035649.18_5	chr4	+	4236	3	FSM	ENSMUSG00000035649.18	ENSMUST00000147272.8	4251	3	6	9	6	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATAAATGTGTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	44923123	44932206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44926071_44929117_44929236_44931035
ENSMUSG00000035653.17_0	chr12	+	1991	4	FSM	ENSMUSG00000035653.17	ENST00000554171.1	2012	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATGACACAATTTGCACA	NA	NA	NA	NA	NA	NA	NA	NA	61716281	61904702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_61716441_61886193_61887599_61897777_61897822_61904319
ENSMUSG00000035666.15_0	chr2	-	7103	6	FSM	ENSMUSG00000035666.15	ENSMUST00000171404.8	7127	6	17	7	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAGGGGATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	28730355	28712317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28726422_28726529_28729894
ENSMUSG00000035666.15_1	chr2	-	6919	5	FSM	ENSMUSG00000035666.15	ENSMUST00000037117.6	6941	5	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTATGCAAAGGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	28730283	28712323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28716810_28717489_28717579_28720513_28720645_28723561_28725386_28729894
ENSMUSG00000035671.7_0	chr8	-	4598	14	FSM	ENSMUSG00000035671.7	ENSMUST00000039480.7	4625	14	20	7	20	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACCCAGATTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	84963664	84937313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84939435_84940651_84940734_84943873_84944038_84946454_84946610_84949848_84949985_84950299_84950555_84950771_84950910_84952444_84952796_84953300_84953469_84955420_84955572_84955651_84955801_84957369_84957727_84961531_84961734_84963495
ENSMUSG00000035673.11_0	chr10	-	4836	33	FSM	ENSMUSG00000035673.11	ENSMUST00000219260.2	4850	33	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTGCTGTGGCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	79940196	79892831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938443_79938556_79940035
ENSMUSG00000035673.11_2	chr10	-	4225	32	FSM	ENSMUSG00000035673.11	ENSMUST00000042771.8	4227	32	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGCTACTTCAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	79938532	79893251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79893699_79893789_79893981_79894086_79894164_79894249_79894382_79894470_79894567_79894638_79894734_79895769_79895914_79895998_79896074_79896227_79896337_79896423_79896496_79896622_79896736_79896817_79896954_79897149_79897282_79897995_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905271_79905444_79905542_79905801_79905886_79908190_79908353_79918448_79918561_79920074_79920149_79922090_79922267_79938450
ENSMUSG00000035673.11_6	chr10	-	2431	15	FSM	ENSMUSG00000035673.11	ENSMUST00000217972.2	2462	15	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCCTCTCAAAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79911235	79897874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79898166_79898401_79898594_79899482_79899563_79899978_79900077_79900153_79900331_79902383_79902538_79902664_79902771_79903110_79903229_79904161_79904306_79904518_79904610_79904692_79904827_79905115_79905542_79905801_79905886_79908190_79908353_79911061
ENSMUSG00000035674.14_0	chr7	+	505	4	FSM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTGTACATAGGGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	3620371	3623316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3620407_3620615_3620691_3622428_3622507_3622999
ENSMUSG00000035674.14_2	chr7	+	460	3	ISM	ENSMUSG00000035674.14	ENSMUST00000076657.11	515	4	255	9	242	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTACATAGGGAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	3620626	3623317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_3620691_3622428_3622507_3622999
ENSMUSG00000035678.9_0	chr17	+	1280	3	FSM	ENSMUSG00000035678.9	ENSMUST00000039490.9	1290	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCCTTTTATTATTT	NA	NA	NA	NA	NA	NA	NA	NA	57412334	57414757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_57412861_57413249_57413287_57414040
ENSMUSG00000035681.8_0	chr10	+	3280	5	FSM	ENSMUSG00000035681.8	ENST00000350228.6	3292	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGACTTGAATCCTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	112106046	112302169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_112106454_112107591_112108310_112291512_112292441_112299895_112299991_112301037
ENSMUSG00000035681.8_1	chr10	+	3048	5	FSM	ENSMUSG00000035681.8	ENST00000548513.5	3067	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGATTCATACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	112107601	112302189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_112108310_112291512_112292441_112294394_112294560_112299895_112299991_112301037
ENSMUSG00000035681.8_2	chr10	+	2956	4	FSM	ENSMUSG00000035681.8	ENST00000550433.5	2972	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATGATTCATACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	112107598	112302189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_112108310_112291512_112292441_112294394_112294560_112301037
ENSMUSG00000035683.14_0	chr4	+	2942	18	FSM	ENSMUSG00000035683.14	ENSMUST00000045607.12	2955	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAAATAGCACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44300886	44364673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44301073_44303570_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340746_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_26	chr4	+	2091	15	FSM	ENSMUSG00000035683.14	ENST00000536329.5	2101	15	4	6	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCAAGCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44303592	44364226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44303667_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_32	chr4	+	2183	16	FSM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	4	6	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCAAGCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44303592	44364226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44303667_44306031_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_40	chr4	+	2206	16	FSM	ENSMUSG00000035683.14	ENST00000543751.5	2218	16	6	6	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCAAGCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44303594	44364226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44303667_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_62	chr4	+	2109	15	ISM	ENSMUSG00000035683.14	ENST00000541717.4	2193	16	2443	6	-955	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCAAGCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44306031	44364226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_44306118_44306989_44307107_44308905_44309050_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035683.14_74	chr4	+	1984	14	FSM	ENSMUSG00000035683.14	ENST00000536987.5	1998	14	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATATCAAGCTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44306995	44364226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_44307107_44310289_44310359_44312163_44312257_44318023_44318123_44324199_44324269_44325640_44325740_44332879_44332967_44340625_44340753_44344912_44345024_44347123_44347356_44349843_44349941_44350941_44351111_44360871_44360976_44363709
ENSMUSG00000035696.16_0	chr4	-	5053	11	FSM	ENSMUSG00000035696.16	ENSMUST00000098098.9	5061	11	0	8	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTAAGTCGTGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	44167608	44126217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44167317
ENSMUSG00000035696.16_2	chr4	-	5197	12	FSM	ENSMUSG00000035696.16	ENSMUST00000102934.9	5240	12	33	10	33	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTCAAACCTAAGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	44167918	44126224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44129657_44131543_44131644_44133639_44133762_44134889_44134975_44137554_44137662_44138669_44138832_44142294_44142466_44143447_44143616_44149024_44149239_44152359_44152554_44158902_44159053_44167626
ENSMUSG00000035697.15_0	chr10	+	2183	13	FSM	ENSMUSG00000035697.15	ENST00000590577.2	2203	13	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACCATCAGCTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	79860503	79866898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79860686_79861242_79861381_79861989_79862181_79862266_79862392_79862490_79862574_79862656_79862762_79862866_79863040_79863372_79863562_79863654_79863793_79864490_79864718_79864806_79865018_79866122_79866211_79866565
ENSMUSG00000035704.18_0	chr7	+	2025	13	FSM	ENSMUSG00000035704.18	ENSMUST00000098300.6	2039	13	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTCACATTCACTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	97020825	97041391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_13	chr7	+	1602	13	FSM	ENSMUSG00000035704.18	ENST00000376156.7	1617	13	2	13	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGAATAAAGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97020875	97040959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040675
ENSMUSG00000035704.18_18	chr7	+	1344	12	FSM	ENSMUSG00000035704.18	ENST00000530608.6	1357	12	2	11	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATAAAGAAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97020875	97040961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97020940_97027429_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_38	chr7	+	1207	10	ISM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	2007	13	2007	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAACATTGAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97022880	97040953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_52	chr7	+	1277	11	ISM	ENSMUSG00000035704.18	ENST00000530608.6	1357	12	6559	11	6559	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATAAAGAAGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97027432	97040961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97032892_97033014_97036008_97036149_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035704.18_8	chr7	+	1274	11	FSM	ENSMUSG00000035704.18	ENST00000532306.6	1291	11	4	13	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAACATTGAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97020877	97040953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_97020940_97022875_97022955_97027307_97027502_97029014_97029125_97029447_97029516_97031780_97031908_97032125_97032230_97037655_97037796_97039448_97039547_97040095_97040169_97040734
ENSMUSG00000035711.6_0	chr13	-	492	4	FSM	ENSMUSG00000035711.6	ENST00000377112.8	497	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTGAGGTGCCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55677080	55672036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55672205_55672293_55672394_55676261_55676433_55677027
ENSMUSG00000035711.6_1	chr13	-	431	3	ISM	ENSMUSG00000035711.6	ENST00000377112.8	497	4	656	5	-73	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTGAGGTGCCGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	55676424	55672036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_55672205_55672293_55672394_55676261
ENSMUSG00000035713.16_0	chr7	-	3965	10	FSM	ENSMUSG00000035713.16	ENSMUST00000168435.7	3982	10	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGAGTTGTGGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	96975156	96958588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498
ENSMUSG00000035713.16_1	chr7	-	4244	11	FSM	ENSMUSG00000035713.16	ENSMUST00000139582.9	4262	11	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGAGTTGTGGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	96981211	96958588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_96959704_96960559_96961833_96962262_96962370_96962705_96962800_96963940_96964135_96969173_96969333_96970766_96970869_96971255_96971386_96973414_96973548_96974498_96975268_96981043
ENSMUSG00000035722.16_0	chr10	+	6677	47	FSM	ENSMUSG00000035722.16	ENSMUST00000132517.8	6696	47	4	15	4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAGAATGAGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79832331	79851391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79832423_79833441_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUSG00000035722.16_11	chr10	+	6577	46	FSM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	2	11	2	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAGAATGAGAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	79833450	79851391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUSG00000035722.16_19	chr10	+	6507	45	ISM	ENSMUSG00000035722.16	ENSMUST00000043866.8	6590	46	157	14	157	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACTAGAATGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	79833605	79851388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843157_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUSG00000035722.16_9	chr10	+	6603	46	FSM	ENSMUSG00000035722.16	ENSMUST00000171637.8	6638	46	29	6	-10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGAAACTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79833438	79851381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79833515_79833602_79833697_79833847_79833990_79834077_79834191_79834284_79834359_79834590_79834672_79835214_79835426_79835514_79835655_79836545_79836663_79836756_79836925_79837323_79837554_79837868_79838046_79838340_79838564_79838664_79838887_79838965_79839168_79839630_79839742_79840214_79840387_79840552_79840685_79840787_79840928_79841476_79841615_79841821_79842010_79842085_79842144_79842266_79842545_79842719_79842757_79842969_79843063_79843133_79843286_79843487_79843613_79843696_79843796_79843978_79844267_79844372_79844406_79844496_79844675_79844761_79844932_79845691_79845870_79845984_79846101_79846869_79847015_79847108_79847233_79847546_79847677_79847748_79847870_79847957_79848021_79849145_79849253_79849452_79849595_79849679_79849815_79850062_79850167_79850301_79850395_79850780_79851022_79851139
ENSMUSG00000035725.14_0	chrX	-	4129	9	FSM	ENSMUSG00000035725.14	ENSMUST00000036333.14	4146	9	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTATTTGGGAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	76839867	76805016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_76807498_76807711_76807861_76808178_76808257_76808954_76809013_76814852_76814949_76816721_76816842_76825643_76825908_76829733_76829903_76839153
ENSMUSG00000035726.9_0	chr14	-	4660	26	FSM	ENSMUSG00000035726.9	ENSMUST00000046709.9	4673	26	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTCTTATGACCA	NA	NA	NA	NA	NA	NA	NA	NA	52434863	52397873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52399280_52400143_52400222_52400640_52400771_52401878_52402009_52408283_52408454_52408882_52408959_52409494_52409608_52409904_52410031_52410927_52411047_52411233_52411361_52411452_52411589_52412698_52412827_52413816_52413971_52414066_52414183_52414405_52414502_52414611_52414678_52415500_52415614_52415740_52415815_52416930_52417022_52417557_52417731_52418473_52418626_52418993_52419141_52419613_52419767_52420468_52420640_52421384_52421478_52434541
ENSMUSG00000035735.11_0	chr19	-	5623	20	FSM	ENSMUSG00000035735.11	ENSMUST00000039327.11	5634	20	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCACACCTCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	10282239	10222637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857_10248996_10282184
ENSMUSG00000035735.11_1	chr19	-	5562	19	ISM	ENSMUSG00000035735.11	ENSMUST00000039327.11	5634	20	33252	9	33252	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCACACCTCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	10248989	10222637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10225989_10227732_10227921_10228430_10228561_10229402_10229603_10230693_10230767_10231080_10231150_10232170_10232314_10233024_10233106_10233487_10233566_10233660_10233745_10234181_10234336_10238014_10238140_10239857_10239936_10240457_10240593_10242371_10242460_10246550_10246690_10247080_10247183_10248351_10248564_10248857
ENSMUSG00000035754.9_0	chr10	+	3877	10	FSM	ENSMUSG00000035754.9	ENSMUST00000045247.9	3911	10	11	23	11	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	1997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	79795996	79806014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79796207_79796835_79796947_79800759_79800894_79801043_79801186_79801813_79801958_79802039_79802105_79802178_79802304_79802393_79802561_79803153_79803223_79803304
ENSMUSG00000035757.18_0	chr15	+	2366	9	FSM	ENSMUSG00000035757.18	ENSMUST00000082439.6	2383	9	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1091	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCTATCTCTGGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	88973297	88984537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88973869_88976906_88977111_88978339_88978527_88979801_88979933_88980741_88981023_88982834_88982980_88983465_88983652_88983789_88983947_88984033
ENSMUSG00000035759.5_0	chr10	+	2739	2	FSM	ENSMUSG00000035759.5	ENSMUST00000040454.5	2744	2	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGCATGTAAGTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	111134542	111137586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111134769_111135073
ENSMUSG00000035762.12_0	chr13	+	2833	12	FSM	ENSMUSG00000035762.12	ENSMUST00000057495.10	2857	12	8	16	8	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAACAAAACATAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84370426	84444244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_84370554_84399348_84399453_84405879_84405964_84408261_84408360_84420289_84420447_84430829_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440497_84440673_84441499_84441597_84442721
ENSMUSG00000035762.12_11	chr13	+	1270	7	ISM	ENSMUSG00000035762.12	ENST00000511218.5	1345	8	10487	9	10487	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATAGTTGCTGCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	84430868	84443371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440578_84440673_84441499_84441597_84442721
ENSMUSG00000035762.12_2	chr13	+	1337	8	FSM	ENSMUSG00000035762.12	ENST00000511218.5	1345	8	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTGCTGCCTACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	84420383	84443374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_84420447_84430867_84430982_84431422_84431484_84432103_84432245_84434803_84434918_84440578_84440673_84441499_84441597_84442721
ENSMUSG00000035764.6_0	chr16	-	4147	3	FSM	ENSMUSG00000035764.6	ENSMUST00000042732.6	4179	3	22	10	22	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAGGAACTCTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32065954	32048939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_32052087_32057217_32057575_32065311
ENSMUSG00000035765.11_0	chr18	+	2443	17	FSM	ENSMUSG00000035765.11	ENSMUST00000039608.9	2456	17	13	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGTGACTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	75151868	75420035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75152056_75176149_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035765.11_9	chr18	+	2218	17	FSM	ENSMUSG00000035765.11	ENST00000675505.1	2235	17	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGGACACAGCCACGCC	NA	NA	NA	NA	NA	NA	NA	NA	75176156	75419839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75176341_75186051_75186105_75188351_75188446_75189700_75189835_75196171_75196245_75213273_75213400_75215435_75215579_75247860_75248044_75252181_75252361_75256528_75256655_75258494_75258609_75259895_75259991_75295537_75295703_75332233_75332337_75363060_75363244_75376355_75376470_75419690
ENSMUSG00000035769.10_0	chr9	+	3368	19	FSM	ENSMUSG00000035769.10	ENSMUST00000039610.10	3383	19	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTGAAAACACCTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119186454	119222379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119186774_119188297_119188381_119190179_119190250_119193562_119193644_119196554_119196642_119197137_119197267_119198685_119198752_119200981_119201055_119203365_119203485_119207309_119207392_119209051_119209093_119209649_119209766_119210567_119210684_119211319_119211394_119212402_119212500_119215384_119215444_119217746_119217835_119219495_119219591_119220806
ENSMUSG00000035770.9_0	chr8	-	4605	13	FSM	ENSMUSG00000035770.9	ENSMUST00000041769.8	4627	13	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTAAGAGGTTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	105169665	105144319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105167105_105167223_105169105_105169180_105169326
ENSMUSG00000035770.9_3	chr8	-	1488	12	FSM	ENSMUSG00000035770.9	ENST00000443351.6	1499	12	10	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAAGTGCAGCTGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	105169433	105146973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105147315_105148918_105149036_105149744_105149863_105150217_105150260_105152070_105152131_105152590_105152703_105154677_105154814_105156046_105156141_105157032_105157203_105167105_105167223_105169105_105169180_105169326
ENSMUSG00000035770.9_8	chr8	-	857	6	FSM	ENSMUSG00000035770.9	ENST00000440564.6	869	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGTGCGCCTTTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	105169424	105154623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105154814_105156046_105156141_105157032_105157203_105163994_105164226_105169105_105169180_105169326
ENSMUSG00000035772.12_0	chr2	+	2075	4	FSM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCTCTAGAACTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	28358081	28361189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_28358155_28358254_28358372_28358832_28358963_28359434
ENSMUSG00000035772.12_1	chr2	+	1996	3	ISM	ENSMUSG00000035772.12	ENSMUST00000038600.4	2080	4	183	1	183	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTCTCTAGAACTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	28358260	28361189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_28358372_28358832_28358963_28359434
ENSMUSG00000035776.15_0	chrX	-	3315	9	FSM	ENSMUSG00000035776.15	ENSMUST00000080035.11	3327	9	11	1	-8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGATGTGATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	70536240	70463666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70494216_70494280_70536127
ENSMUSG00000035776.15_1	chrX	-	3589	10	FSM	ENSMUSG00000035776.15	ENSMUST00000037391.12	3600	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGATGTGATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	70536445	70463666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70484679_70484752_70493544_70493614_70494216_70494280_70536127
ENSMUSG00000035776.15_2	chrX	-	3440	8	FSM	ENSMUSG00000035776.15	ENSMUST00000114586.9	3459	8	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGATGTGATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	70536437	70463666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_70466356_70467629_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484218_70494216_70494280_70536127
ENSMUSG00000035776.15_6	chrX	-	534	7	FSM	ENSMUSG00000035776.15	ENST00000355149.8	544	7	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGGACTTCTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	70536225	70467632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_70467696_70472652_70472773_70473916_70473956_70481739_70481806_70484130_70484212_70494212_70494280_70536127
ENSMUSG00000035778.18_0	chr2	-	3235	6	FSM	ENSMUSG00000035778.18	ENSMUST00000079424.11	3254	6	13	6	13	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35322632	35290196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35312191_35312281_35313243_35313425_35322525
ENSMUSG00000035778.18_1	chr2	-	3314	7	ISM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	28633	6	0	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35322645	35290196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525
ENSMUSG00000035778.18_2	chr2	-	3376	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113002.9	3391	8	9	6	-8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35351269	35290196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUSG00000035778.18_3	chr2	-	3338	8	FSM	ENSMUSG00000035778.18	ENSMUST00000113001.9	3340	8	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35351261	35290196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUSG00000035778.18_5	chr2	-	3583	9	FSM	ENSMUSG00000035778.18	ENSMUST00000102794.8	3606	9	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATTCTGGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35351440	35290196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_35292815_35297956_35298095_35303337_35303440_35304230_35304297_35306483_35306520_35312191_35312281_35313243_35313425_35322525_35322645_35351206
ENSMUSG00000035781.15_0	chr10	-	1885	8	FSM	ENSMUSG00000035781.15	ENSMUST00000045628.15	1898	8	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTGTCCCCGTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79752828	79745886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79746974_79747775_79747832_79747908_79747995_79748229_79748316_79748482_79748604_79749058_79749181_79749390_79749546_79752656
ENSMUSG00000035783.10_0	chr19	-	2019	9	FSM	ENSMUSG00000035783.10	ENSMUST00000039631.10	2035	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	33874	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCATCAAGCCTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	34232980	34218495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_34219211_34220716_34220899_34222311_34222504_34223477_34223640_34224051_34224137_34225823_34225935_34229129_34229259_34229824_34229977_34232689
ENSMUSG00000035790.16_0	chr16	+	1695	4	FSM	ENSMUSG00000035790.16	ENSMUST00000115168.9	1718	4	16	7	16	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTTACTGGCTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31918633	31926880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31918930_31921784_31921863_31922701_31922866_31925723
ENSMUSG00000035790.16_1	chr16	+	1315	2	FSM	ENSMUSG00000035790.16	ENSMUST00000169186.3	1320	2	0	5	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGTAAGTGATAAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	31922695	31926868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31922866_31925723
ENSMUSG00000035798.15_1	chr10	-	4512	17	NNC	ENSMUSG00000035798.15	novel	4548	17	NA	NA	28	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTAAATGTGGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	110845899	110777648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_-_110780393_110781329_110781425_110782027_110782186_110783159_110783244_110784051_110784146_110785481_110785545_110786421_110786545_110790924_110791028_110792146_110792290_110796872_110796999_110803544_110803708_110804289_110804355_110809608_110809754_110810204_110810283_110817856_110817980_110821800_110821905_110845798
ENSMUSG00000035824.8_0	chr8	-	2388	10	FSM	ENSMUSG00000035824.8	ENSMUST00000050211.7	2406	10	12	6	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCATTTTCATTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	104975178	104953322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104967747_104967802_104970016_104970092_104974278_104974317_104975032
ENSMUSG00000035824.8_3	chr8	-	575	7	FSM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAGTGATCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	104970080	104954886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375_104965466_104970016
ENSMUSG00000035824.8_4	chr8	-	508	6	ISM	ENSMUSG00000035824.8	ENST00000417693.8	581	7	4620	4	4620	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAGTGATCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	104965462	104954886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_104954984_104955844_104955926_104957176_104957257_104957791_104957881_104963403_104963478_104965375
ENSMUSG00000035824.8_5	chr8	-	459	6	FSM	ENSMUSG00000035824.8	ENST00000569718.6	466	6	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAGTGATCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	104970079	104954886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_104954984_104955844_104955926_104963403_104963478_104965375_104965466_104967747_104967802_104970016
ENSMUSG00000035824.8_6	chr8	-	397	5	ISM	ENSMUSG00000035824.8	ENST00000569718.6	466	6	2280	4	2280	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAGTGATCTACAAG	NA	NA	NA	NA	NA	NA	NA	NA	104967802	104954886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_104954984_104955844_104955926_104963403_104963478_104965375_104965466_104967747
ENSMUSG00000035828.12_0	chr15	+	2405	6	FSM	ENSMUSG00000035828.12	ENSMUST00000042818.11	2427	6	12	10	12	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGGATAACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88746400	88749919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88746956_88747040_88747151_88747243_88747295_88747381_88747752_88748518_88748696_88748777
ENSMUSG00000035834.12_0	chr13	-	3039	8	FSM	ENSMUSG00000035834.12	ENSMUST00000048993.12	3054	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACCAAGATGATTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	81859123	81821967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_81824242_81826234_81826379_81830230_81830314_81835244_81835296_81837315_81837376_81842766_81842897_81847862_81848013_81858976
ENSMUSG00000035835.15_0	chr10	-	2735	7	FSM	ENSMUSG00000035835.15	ENSMUST00000092325.11	2766	7	27	4	27	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACGTGGTCTGGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79710441	79700618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79702016_79702245_79702420_79702501_79702560_79702668_79702865_79703005_79703142_79703221_79703408_79709853
ENSMUSG00000035840.8_0	chr13	+	4227	3	FSM	ENSMUSG00000035840.8	ENSMUST00000224300.2	4250	3	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTGAAAATGGAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	81805794	81820980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_81806056_81813123_81813389_81817279
ENSMUSG00000035842.11_0	chr17	+	4134	26	NIC	ENSMUSG00000035842.11	novel	4149	27	NA	NA	1	-5	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTACATGAACTTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	66430515	66459157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_66430688_66433167_66433316_66436851_66437098_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUSG00000035842.11_3	chr17	+	4132	27	FSM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	2	7	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	66430609	66459162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66430688_66433167_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUSG00000035842.11_6	chr17	+	4056	26	ISM	ENSMUSG00000035842.11	ENSMUST00000224497.2	4141	27	2558	7	2558	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAACTTCATGATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	66433165	66459162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_66433316_66436851_66437098_66437454_66437542_66437674_66437830_66440211_66440258_66441079_66441188_66442816_66442905_66443283_66443490_66445081_66445235_66446022_66446070_66446392_66446473_66447183_66447229_66447345_66447414_66450182_66450222_66450420_66450542_66450644_66450768_66451172_66451286_66454662_66454736_66454986_66455091_66455648_66455799_66456025_66456095_66456207_66456309_66456962_66457048_66457325_66457405_66457568_66457724_66457797
ENSMUSG00000035845.18_0	chr15	-	2128	10	FSM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	0	2	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88703521	88689448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ENSMUSG00000035845.18_1	chr15	-	2059	9	ISM	ENSMUSG00000035845.18	ENSMUST00000162183.8	2130	10	3072	2	3039	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88700449	88689448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_88690258_88690601_88690678_88690760_88690925_88695499_88695724_88696258_88696363_88698656_88698852_88699496_88699671_88700060_88700194_88700269
ENSMUSG00000035845.18_7	chr15	-	1761	7	ISM	ENSMUSG00000035845.18	ENSMUST00000043087.15	1793	8	3034	1	3034	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88700454	88689448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_88690258_88690601_88690678_88690760_88690925_88698631_88698852_88699496_88699671_88700060_88700194_88700269
ENSMUSG00000035845.18_8	chr15	-	1792	8	FSM	ENSMUSG00000035845.18	ENSMUST00000043087.15	1793	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTGTGTCTTGTTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	88703488	88689448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88690258_88690601_88690678_88690760_88690925_88698631_88698852_88699496_88699671_88700060_88700194_88700269_88700458_88703460
ENSMUSG00000035849.15_0	chr11	-	3019	6	FSM	ENSMUSG00000035849.15	ENSMUST00000103132.10	3072	6	29	24	29	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAAAATTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	99134864	99123610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99125974_99126962_99127096_99127290_99127368_99129359_99129581_99131318_99131448_99134768
ENSMUSG00000035851.15_0	chr5	+	3204	16	FSM	ENSMUSG00000035851.15	ENSMUST00000119339.8	3222	16	8	10	-4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTGACACTAACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	86952087	86984503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035851.15_22	chr5	+	2955	17	FSM	ENSMUSG00000035851.15	ENSMUST00000038384.8	2960	17	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAACTTGCTGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	86952422	86984511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979631_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035851.15_8	chr5	+	3252	17	FSM	ENSMUSG00000035851.15	ENSMUST00000120498.8	3269	17	6	11	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACACTAACTTGCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	86952097	86984507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_86952451_86963487_86963590_86964322_86964652_86964765_86965193_86967944_86968035_86968491_86968546_86969110_86969206_86970454_86970564_86970649_86970768_86974585_86974671_86975813_86975981_86978412_86978496_86979522_86979560_86979655_86979696_86979806_86979870_86981366_86981502_86983542
ENSMUSG00000035863.15_0	chr10	+	2626	9	FSM	ENSMUSG00000035863.15	ENSMUST00000046945.13	2651	9	12	13	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAACAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79629417	79656717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79652625_79652758_79654874
ENSMUSG00000035863.15_3	chr10	+	2500	8	FSM	ENSMUSG00000035863.15	ENSMUST00000105379.3	2519	8	6	13	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAACAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79629411	79656717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79648176_79648199_79651018_79651076_79654874
ENSMUSG00000035863.15_4	chr10	+	2445	6	FSM	ENSMUSG00000035863.15	ENST00000264560.11	2466	6	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAACAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79629444	79656717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79629575_79642473_79642526_79642867_79642949_79643411_79643543_79645303_79645455_79654817
ENSMUSG00000035864.15_1	chr10	-	4147	8	FSM	ENSMUSG00000035864.15	ENST00000457153.6	4157	8	9	1	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1394	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGTTGCTGTCTCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	108526908	108333511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_108336608_108340257_108340392_108419734_108419853_108463113_108463282_108467656_108467825_108472411_108472526_108478074_108478260_108526744
ENSMUSG00000035877.18_0	chr2	-	9546	3	FSM	ENSMUSG00000035877.18	ENSMUST00000103111.9	9563	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCATGGAACTATCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	160714486	160607115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_160613546_160621320_160624300_160714349
ENSMUSG00000035877.18_1	chr2	-	9094	4	FSM	ENSMUSG00000035877.18	ENSMUST00000103112.8	9109	4	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCTGTCTTTGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	160701537	160607702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_160613546_160621320_160624300_160674216_160674339_160701387
ENSMUSG00000035877.18_4	chr2	-	1966	2	FSM	ENSMUSG00000035877.18	ENST00000560364.5	1979	2	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAGTAGACAAAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	160624169	160612243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_160613546_160623505
ENSMUSG00000035885.6_0	chr19	-	535	2	FSM	ENSMUSG00000035885.6	ENSMUST00000039758.6	550	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGCATCATGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	7194971	7192522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7192850_7194763
ENSMUSG00000035890.10_0	chr10	-	1634	9	FSM	ENSMUSG00000035890.10	ENSMUST00000047203.9	1639	9	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGGTGTCCATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	79602781	79594348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597398_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ENSMUSG00000035890.10_3	chr10	-	924	9	FSM	ENSMUSG00000035890.10	ENST00000569893.1	931	9	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTCCCACCTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	79602655	79594925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597405_79597468_79597918_79598164_79598315_79598380_79598480_79598540_79602586
ENSMUSG00000035890.10_4	chr10	-	859	8	ISM	ENSMUSG00000035890.10	ENST00000569893.1	931	9	4118	1	4118	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCACCTGGCCATCCCC	NA	NA	NA	NA	NA	NA	NA	NA	79598539	79594921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_79595071_79596624_79596741_79596822_79596917_79597263_79597334_79597405_79597468_79597918_79598164_79598315_79598380_79598480
ENSMUSG00000035891.17_0	chr15	-	4506	13	FSM	ENSMUSG00000035891.17	ENSMUST00000044332.16	4518	13	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATGGCCTCCCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	86070334	86023333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_86025814_86026882_86027092_86028722_86028929_86029688_86029766_86030485_86030592_86033478_86033632_86035735_86035811_86039174_86039321_86040788_86040853_86043294_86043421_86049168_86049292_86050022_86050137_86069707
ENSMUSG00000035898.14_1	chr5	-	6581	33	FSM	ENSMUSG00000035898.14	ENSMUST00000039373.14	6590	33	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACATTTCTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	86320661	86257153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320526
ENSMUSG00000035898.14_6	chr5	-	3478	33	FSM	ENSMUSG00000035898.14	ENSMUST00000113373.2	3504	33	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAGAAATTGAAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	86320356	86260212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86260648_86265882_86265978_86267191_86267280_86268386_86268515_86270163_86270358_86272169_86272288_86274327_86274400_86275558_86275629_86276534_86276599_86276686_86276739_86279071_86279201_86280300_86280382_86280476_86280567_86282832_86282939_86284167_86284350_86285675_86285754_86288214_86288296_86289406_86289486_86290263_86290332_86292193_86292338_86294933_86295001_86295663_86295741_86296727_86296791_86297868_86297973_86300425_86300550_86300684_86300808_86302212_86302294_86307062_86307175_86308137_86308233_86311937_86311967_86312555_86312651_86318413_86318477_86320265
ENSMUSG00000035900.19_0	chr15	+	4096	19	FSM	ENSMUSG00000035900.19	ENSMUST00000088931.10	4115	19	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATCCTTTGTTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	85941911	86021832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85942033_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86019081_86019151_86019550
ENSMUSG00000035900.19_2	chr15	+	4265	19	FSM	ENSMUSG00000035900.19	ENSMUST00000138134.8	4292	19	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGCTCTGTGCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	85942945	86021810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85943163_85975513_85975725_85984980_85985102_86002663_86002785_86006379_86006454_86009324_86009458_86010057_86010084_86011189_86011282_86011750_86011843_86012865_86012915_86013850_86013923_86014347_86014392_86014457_86014568_86014703_86014859_86016054_86016200_86017015_86017110_86017875_86017961_86018986_86019151_86019550
ENSMUSG00000035901.15_19	chr7	-	4034	23	FSM	ENSMUSG00000035901.15	ENST00000530044.5	4050	23	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGACAGAGAGGGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	109559393	109493638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109494023_109495483_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUSG00000035901.15_4	chr7	-	4771	23	FSM	ENSMUSG00000035901.15	ENST00000679568.1	4788	23	15	2	-14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTAATAAAACACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	109559417	109493010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109494023_109495398_109495619_109496153_109496278_109497110_109497194_109497714_109497897_109498250_109498370_109498930_109499077_109500266_109500389_109504376_109504506_109504902_109504988_109507537_109507623_109511121_109511275_109513927_109514060_109515417_109515512_109516591_109516743_109517800_109518036_109518468_109518685_109520400_109520719_109526033_109526222_109532819_109533478_109533899_109534010_109534688_109534761_109559280
ENSMUSG00000035914.12_0	chr9	-	3582	8	FSM	ENSMUSG00000035914.12	ENSMUST00000165365.3	3603	8	17	4	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	58462703	58431584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949_58448224_58462304
ENSMUSG00000035914.12_1	chr9	-	3181	7	FSM	ENSMUSG00000035914.12	ENSMUST00000039788.11	3186	7	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGCCTCTGGCCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	58448221	58431584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58433645_58434801_58434838_58435734_58435777_58437878_58438014_58442738_58443036_58444551_58444891_58447949
ENSMUSG00000035916.9_0	chr10	-	7390	45	FSM	ENSMUSG00000035916.9	ENSMUST00000050702.9	7393	45	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATACCTGTTTCAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	107555912	107352912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_107353259_107353649_107353774_107359360_107359497_107360068_107360218_107361553_107361680_107361870_107362006_107370494_107370572_107374792_107374884_107378512_107378595_107379252_107379280_107398995_107399125_107401701_107401802_107408822_107408897_107411749_107411973_107412705_107412865_107416063_107416131_107418208_107418454_107422469_107422657_107426799_107426922_107443990_107444315_107471111_107471382_107474685_107474828_107478765_107478918_107479301_107479578_107479820_107480115_107482417_107482587_107488450_107488597_107489284_107489446_107498397_107498519_107502359_107502462_107503201_107503385_107520898_107521181_107521394_107521503_107522067_107522248_107522349_107522512_107524191_107524370_107535401_107535575_107541335_107541483_107544486_107544616_107546379_107546630_107547733_107547934_107551943_107552014_107554330_107554558_107555228_107555341_107555679
ENSMUSG00000035919.17_0	chr9	+	3371	22	FSM	ENSMUSG00000035919.17	ENSMUST00000039798.16	3382	22	0	11	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTCAAACAATAACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	22387010	22799565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22387352_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUSG00000035919.17_1	chr9	+	3408	23	FSM	ENSMUSG00000035919.17	ENSMUST00000150395.8	3425	23	11	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTCAAACAATAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	22387028	22799564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22387352_22387865_22387922_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUSG00000035919.17_5	chr9	+	3481	22	FSM	ENSMUSG00000035919.17	ENSMUST00000147712.8	3495	22	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTCAAACAATAACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	22387034	22799564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22387487_22402113_22402237_22408004_22408156_22415340_22415406_22425275_22425390_22479000_22479176_22486406_22486492_22489932_22490117_22490759_22490890_22540237_22540417_22546906_22546984_22550025_22550080_22555040_22555144_22557259_22557365_22566520_22566662_22570345_22570442_22582080_22582254_22590207_22590361_22705046_22705230_22723616_22723840_22798876_22798985_22799157
ENSMUSG00000035929.12_0	chr17	+	1781	6	FSM	ENSMUSG00000035929.12	ENSMUST00000081435.5	1793	6	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACACTTATATTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	35598594	35603640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35598684_35598795_35599150_35599336_35599613_35601833_35602110_35602236_35602353_35602970
ENSMUSG00000035933.6_0	chr12	+	2994	23	FSM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGGTGTTTCTTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	31704868	31987627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_31704983_31710715_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ENSMUSG00000035933.6_1	chr12	+	2876	22	ISM	ENSMUSG00000035933.6	ENSMUST00000036862.5	2997	23	5847	7	5847	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTACTGGTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31710714	31987622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_31710856_31715463_31715522_31719768_31719824_31720314_31720385_31735651_31735773_31810845_31810977_31840845_31841012_31851981_31852095_31852404_31852483_31870123_31870206_31883180_31883386_31887193_31887356_31889753_31889854_31919417_31919529_31920070_31920134_31936203_31936308_31943969_31944208_31950895_31950973_31969649_31969777_31970552_31970633_31975643_31975791_31987175
ENSMUSG00000035934.17_0	chr9	-	3622	13	FSM	ENSMUSG00000035934.17	ENSMUST00000039674.13	3632	13	3	7	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGAAATACTGATGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	37058700	36802284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36804354_36805615_36805795_36806606_36806684_36820924_36821045_36821807_36821906_36822429_36822560_36834879_36835069_36847616_36847789_36865988_36866129_36879673_36879783_36898463_36898569_36994502_36994573_37058536
ENSMUSG00000035936.7_0	chr13	-	5630	10	FSM	ENSMUSG00000035936.7	ENSMUST00000037615.7	5647	10	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGAGTGGCTGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	25121628	25091562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_25095750_25096230_25096290_25097726_25097897_25099744_25099904_25102483_25102628_25103661_25103806_25107949_25108067_25109960_25110132_25111523_25111608_25121233
ENSMUSG00000035941.16_2	chr9	-	4303	27	FSM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGAGATGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85631222	85569983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427_85626113_85631183
ENSMUSG00000035941.16_3	chr9	-	4255	26	ISM	ENSMUSG00000035941.16	ENST00000610980.4	4303	27	5119	0	5119	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGAGATGTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	85626103	85569983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_85570568_85572261_85572395_85572746_85572819_85579171_85579319_85585067_85585212_85585703_85585797_85588496_85588658_85590076_85590226_85592428_85592542_85595649_85595772_85596240_85596302_85597351_85597470_85599603_85599706_85600413_85600544_85601065_85601149_85601915_85602003_85604327_85604503_85606099_85606278_85608662_85608787_85610458_85610640_85610728_85610847_85613136_85613308_85614683_85614795_85617027_85617153_85619520_85619618_85625427
ENSMUSG00000035944.18_0	chr15	+	3727	14	FSM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGAAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	85716520	85743015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85716621_85717347_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ENSMUSG00000035944.18_1	chr15	+	3629	13	ISM	ENSMUSG00000035944.18	ENSMUST00000146088.8	3749	14	839	8	839	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCCAAGAGAAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	85717345	85743015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_85717426_85718690_85718773_85720220_85720393_85722906_85723081_85725665_85725742_85728652_85728773_85730531_85730592_85731835_85731875_85735717_85735800_85737020_85737187_85737785_85737946_85738176_85738251_85740671
ENSMUSG00000035948.14_0	chr10	-	4689	16	FSM	ENSMUSG00000035948.14	ENSMUST00000165067.9	4696	16	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAAAGAGTGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	106959444	106769384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_106772094_106773004_106773181_106773264_106773365_106784516_106784640_106787834_106787917_106798822_106798887_106802808_106802905_106824666_106824771_106840524_106840677_106859514_106859611_106859717_106859799_106881073_106881215_106885224_106885360_106889188_106889378_106920667_106920813_106959148
ENSMUSG00000035949.16_0	chr2	-	1857	7	FSM	ENSMUSG00000035949.16	ENSMUST00000028220.10	2030	7	9	164	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34716076	34695353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
ENSMUSG00000035949.16_27	chr2	-	2208	6	ISM	ENSMUSG00000035949.16	ENSMUST00000113075.8	2260	7	145	8	15	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTGAATTATAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	34716068	34696272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973
ENSMUSG00000035949.16_28	chr2	-	2252	7	FSM	ENSMUSG00000035949.16	ENSMUST00000113075.8	2260	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTTGAATTATAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	34716213	34696272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ENSMUSG00000035949.16_4	chr2	-	1834	8	FSM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	1	3	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34716246	34695353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973_34716083_34716183
ENSMUSG00000035949.16_6	chr2	-	1922	8	FSM	ENSMUSG00000035949.16	ENSMUST00000113080.9	1923	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34716242	34695353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34713080_34715973_34716083_34716183
ENSMUSG00000035949.16_7	chr2	-	1862	6	FSM	ENSMUSG00000035949.16	ENSMUST00000113078.8	1872	6	6	4	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34713187	34695353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569
ENSMUSG00000035949.16_8	chr2	-	1771	7	ISM	ENSMUSG00000035949.16	ENSMUST00000091020.10	1838	8	165	3	1	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCCTTTGTTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	34716082	34695353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_34696012_34697289_34697460_34698525_34698613_34700994_34701129_34702826_34703022_34712569_34712988_34715973
ENSMUSG00000035953.15_12	chr14	-	2741	7	FSM	ENSMUSG00000035953.15	ENSMUST00000160835.9	2755	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTGAGTGTCCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	51168297	51163529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035953.15_14	chr14	-	1441	6	FSM	ENSMUSG00000035953.15	ENSMUST00000162957.8	1465	6	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAACCTTTCCCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	51168252	51164678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51167040_51167148_51167590_51167782_51168069
ENSMUSG00000035953.15_15	chr14	-	1573	7	FSM	ENSMUSG00000035953.15	ENSMUST00000049312.14	1594	7	14	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAACCTTTCCCACTTA	NA	NA	NA	NA	NA	NA	NA	NA	51168299	51164678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51165495_51166277_51166369_51166462_51166516_51166658_51166765_51167040_51167148_51167590_51167782_51168090
ENSMUSG00000035954.11_0	chr12	+	8375	52	FSM	ENSMUSG00000035954.11	ENST00000437633.6	8394	52	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTAATGTTTCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	40496092	40896865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_40496394_40671219_40671304_40673801_40673843_40676335_40676392_40681520_40681618_40686081_40686231_40690359_40690445_40699336_40699489_40718404_40718487_40719006_40719068_40722739_40722873_40726700_40726790_40742912_40743039_40752859_40752985_40754329_40754493_40760793_40760901_40775645_40775803_40779847_40779946_40780042_40780127_40780286_40780388_40781823_40781906_40783176_40783348_40787366_40787560_40795657_40795786_40797978_40798114_40805765_40805865_40816237_40816333_40827188_40827265_40829121_40829223_40829644_40829704_40838226_40838376_40840074_40840161_40844766_40844863_40845635_40845697_40849655_40849750_40856847_40856997_40860443_40860531_40862218_40862324_40866188_40866331_40867587_40867755_40870590_40870678_40878778_40878956_40879610_40879695_40882212_40882333_40882641_40882764_40883113_40883235_40884374_40884457_40884619_40884730_40886628_40886702_40888439_40888554_40891235_40891298_40894208
ENSMUSG00000035958.4_0	chr13	+	1937	7	FSM	ENSMUSG00000035958.4	ENSMUST00000038039.3	1957	7	13	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGACTACGACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25015674	25026129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_25015913_25015992_25016079_25019998_25020170_25020837_25020930_25022129_25022249_25024370_25024542_25025069
ENSMUSG00000035960.15_0	chr14	+	1231	5	FSM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCAGCTTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51162425	51164589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51162487_51162669_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035960.15_8	chr14	+	1164	4	ISM	ENSMUSG00000035960.15	ENSMUST00000049411.12	1239	5	251	7	251	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCAGCTTGGCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51162675	51164589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_51162782_51162973_51163162_51163617_51163811_51163912
ENSMUSG00000035967.16_0	chrX	+	3852	18	FSM	ENSMUSG00000035967.16	ENST00000639893.2	3866	18	9	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTCAAAACTACATTT	NA	NA	NA	NA	NA	NA	NA	NA	55500248	55553186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55500677_55500808_55500887_55524989_55525140_55525930_55526021_55526249_55526434_55526685_55526815_55529138_55529303_55530598_55530752_55534365_55534499_55538398_55538494_55539492_55539604_55541875_55542095_55543220_55543345_55544927_55545071_55547020_55547256_55550084_55550460_55551732_55551827_55552239
ENSMUSG00000035969.16_0	chr4	+	5277	12	FSM	ENSMUSG00000035969.16	ENSMUST00000035645.12	5300	12	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCATTTTCTTTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	43381999	43427086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43382200_43414627_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227_43426366_43426447
ENSMUSG00000035969.16_1	chr4	+	5078	10	FSM	ENSMUSG00000035969.16	ENSMUST00000131668.3	5093	10	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCCAAGCCATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	43414701	43427079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43416719_43421604_43422250_43422440_43422627_43422718_43422860_43423674_43423752_43423919_43424095_43424183_43424290_43424897_43424945_43425296_43426129_43426227
ENSMUSG00000035983.5_0	chr12	+	1351	2	FSM	ENSMUSG00000035983.5	ENSMUST00000038121.5	1366	2	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40272756	40275222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_40273553_40274667
ENSMUSG00000035984.15_0	chr18	-	843	6	FSM	ENSMUSG00000035984.15	ENSMUST00000079287.12	843	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTATGCTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34712168	34695688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34695857_34700088_34700208_34702850_34702952_34704508_34704715_34711610_34711821_34712129
ENSMUSG00000035984.15_1	chr18	-	776	5	ISM	ENSMUSG00000035984.15	ENSMUST00000079287.12	843	6	376	0	376	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTATGCTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34711792	34695688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_34695857_34700088_34700208_34702850_34702952_34704508_34704715_34711610
ENSMUSG00000035992.16_0	chr11	+	6249	18	FSM	ENSMUSG00000035992.16	ENSMUST00000046835.14	6255	18	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGATGGGTAATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54329024	54409055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54329215_54356912_54357040_54366457_54366593_54371075_54371177_54371435_54371511_54373320_54373413_54378537_54378622_54380094_54380167_54381628_54381765_54384018_54384221_54387427_54387514_54390236_54390384_54391345_54391516_54393084_54394502_54395563_54395733_54400707_54400906_54404195_54404312_54406323
ENSMUSG00000036002.13_0	chr4	-	3088	9	FSM	ENSMUSG00000036002.13	ENSMUST00000107956.8	3107	9	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAACTAACCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	43045787	43032422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43045647
ENSMUSG00000036002.13_1	chr4	-	3024	9	FSM	ENSMUSG00000036002.13	ENSMUST00000036462.12	3074	9	41	9	41	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGAACTAACCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	43046179	43032422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43033689_43033811_43033988_43034084_43034154_43034375_43034535_43034658_43034765_43034942_43035002_43035835_43036805_43037062_43037207_43046103
ENSMUSG00000036009.17_0	chr10	-	2016	12	FSM	ENSMUSG00000036009.17	ENSMUST00000046638.10	2033	12	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATATTATGATCAATG	NA	NA	NA	NA	NA	NA	NA	NA	105677232	105599059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_105599323_105601080_105601153_105601824_105601900_105615448_105615543_105629200_105629275_105630222_105630253_105633085_105633181_105659020_105659172_105661858_105662453_105665708_105665816_105668711_105668877_105676936
ENSMUSG00000036022.16_0	chrX	-	4303	9	FSM	ENSMUSG00000036022.16	ENSMUST00000071023.12	4334	9	24	7	17	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTAAAAGTCTGCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	52358658	52332298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52335168_52342912_52343010_52347833_52347899_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ENSMUSG00000036022.16_1	chrX	-	3499	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114838.8	3536	9	28	9	28	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGATGGATCGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	52357869	52332310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52335168_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ENSMUSG00000036022.16_4	chrX	-	3052	9	FSM	ENSMUSG00000036022.16	ENSMUST00000114841.2	3074	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCTAATCCACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	52358661	52332630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52334249_52342912_52343010_52347833_52347896_52348717_52348804_52349071_52349174_52349422_52349478_52349566_52349611_52354917_52354997_52357752
ENSMUSG00000036023.7_0	chr14	+	1874	16	FSM	ENSMUSG00000036023.7	ENSMUST00000036126.7	1894	16	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	772	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTCTTTGGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	51045309	51058750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51045445_51047530_51047672_51047956_51048028_51049232_51049284_51052326_51052424_51052808_51052885_51053653_51053757_51054429_51054581_51054788_51054928_51056666_51056731_51056810_51056946_51057117_51057246_51057398_51057499_51057934_51058034_51058251_51058377_51058491
ENSMUSG00000036026.16_0	chr17	-	3270	24	FSM	ENSMUSG00000036026.16	ENSMUST00000113523.9	3284	24	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTTCTGGTTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45997177	45971102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45971907_45972148_45972230_45972379_45972496_45972682_45972851_45973788_45973895_45974432_45974596_45975669_45975736_45975844_45975932_45976090_45976198_45976952_45977107_45977242_45977381_45977503_45977638_45978620_45978745_45980868_45980950_45984085_45984157_45984658_45984768_45984904_45984957_45985044_45985188_45986311_45986350_45988851_45988943_45989888_45989928_45990162_45990243_45990457_45990641_45997042
ENSMUSG00000036030.10_0	chr9	+	5426	20	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	12	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	1567	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCTCCTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72716739	72822624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820088_72821198
ENSMUSG00000036030.10_1	chr9	+	5418	20	NNC	ENSMUSG00000036030.10	novel	5440	20	NA	NA	16	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	121	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTCTCCTCTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	72716743	72822624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_72717040_72749976_72750122_72752139_72752274_72755190_72755329_72755595_72755755_72757033_72757194_72758762_72759011_72762237_72762403_72764056_72764363_72766042_72766232_72798058_72798155_72799090_72799278_72799509_72799638_72801105_72801277_72811986_72812170_72813429_72813551_72814982_72815146_72817918_72818024_72819185_72820084_72821198
ENSMUSG00000036036.16_0	chr17	+	1965	6	FSM	ENSMUSG00000036036.16	ENSMUST00000089968.13	1991	6	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAAACTGAGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37312072	37321516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37312233_37313343_37313670_37314177_37314208_37315688_37315796_37316950_37317087_37320310
ENSMUSG00000036036.16_1	chr17	+	1729	5	FSM	ENSMUSG00000036036.16	ENSMUST00000069250.14	1749	5	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAAACTGAGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37313428	37321516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37313670_37314177_37314208_37315688_37315796_37316941_37317087_37320310
ENSMUSG00000036036.16_2	chr17	+	2585	3	FSM	ENSMUSG00000036036.16	ENSMUST00000174672.2	2597	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCAAACTGAGGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	37314561	37321516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37315796_37316941_37317087_37320310
ENSMUSG00000036046.15_0	chr15	-	6818	10	FSM	ENSMUSG00000036046.15	ENSMUST00000047144.13	6845	10	16	11	-13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTAGAAACCAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84872185	84828147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_84833480_84833751_84833911_84834812_84834976_84837330_84837523_84838102_84838244_84839590_84839693_84839846_84839925_84840006_84840130_84844670_84844823_84871809
ENSMUSG00000036052.15_0	chr4	+	3077	4	FSM	ENSMUSG00000036052.15	ENSMUST00000098112.9	3093	4	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATACCATCTTATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	42949872	42959415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_42950005_42953140_42953386_42956525_42957128_42957317
ENSMUSG00000036054.16_0	chr8	+	4090	10	FSM	ENSMUSG00000036054.16	ENSMUST00000164403.8	4099	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAGCAAAGGACAACT	NA	NA	NA	NA	NA	NA	NA	NA	70686875	70713683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118
ENSMUSG00000036054.16_1	chr8	+	3856	11	FSM	ENSMUSG00000036054.16	ENSMUST00000093458.11	3874	11	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGGCTCCTGTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	70686900	70715755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70687303_70689317_70689445_70695140_70696707_70701075_70701197_70704263_70704752_70706228_70706341_70709779_70710265_70711592_70711655_70712332_70712470_70713118_70713240_70715520
ENSMUSG00000036057.12_0	chr9	-	5316	25	FSM	ENSMUSG00000036057.12	ENSMUST00000040021.12	5346	25	24	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTTGAGTTCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	110237257	110214155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ENSMUSG00000036057.12_5	chr9	-	5005	27	FSM	ENSMUSG00000036057.12	ENST00000265562.5	5025	27	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTACACCTCCCATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	110237249	110214296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110214801_110214881_110214996_110215085_110215225_110215312_110215418_110215521_110215707_110215798_110216825_110216920_110217047_110217112_110217720_110217808_110217989_110218079_110218232_110218308_110218464_110218540_110218859_110219110_110219257_110219537_110219604_110219697_110219813_110219918_110219999_110220111_110220171_110220276_110220334_110220701_110220750_110220834_110220967_110221049_110221131_110221552_110221685_110221770_110221821_110222438_110222516_110222768_110222897_110227188_110227264_110237101
ENSMUSG00000036061.11_0	chr15	-	3599	5	FSM	ENSMUSG00000036061.11	ENSMUST00000229377.2	3601	5	1	1	1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTTTGCAAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	103070403	103061717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103064629_103066043_103066346_103066583_103066655_103069511_103069653_103070229
ENSMUSG00000036061.11_1	chr15	-	3865	7	FSM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTTTGCAAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	103075503	103061717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698_103071865_103072962_103073139_103073227_103073391_103075427
ENSMUSG00000036061.11_2	chr15	-	3791	6	ISM	ENSMUSG00000036061.11	ENSMUST00000229371.2	3882	7	2127	1	2127	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTGTTTTGCAAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	103073392	103061717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_103064629_103066043_103066346_103066583_103066655_103071698_103071865_103072962_103073139_103073227
ENSMUSG00000036061.11_3	chr15	-	3244	2	FSM	ENSMUSG00000036061.11	ENSMUST00000064067.9	3281	2	19	18	19	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATAAACAAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	103066410	103061751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103064629_103066043
ENSMUSG00000036067.13_0	chr2	-	2133	10	FSM	ENSMUSG00000036067.13	ENSMUST00000045702.6	2138	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGGAGGAGTGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	26918010	26911379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26912082_26912730_26912877_26913099_26913262_26913546_26913656_26914194_26914348_26914596_26914806_26915234_26915335_26915912_26916120_26917152_26917316_26917828
ENSMUSG00000036067.13_2	chr2	-	1501	9	FSM	ENSMUSG00000036067.13	ENST00000371899.9	1516	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCACACTTCCACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	26917298	26911822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26912082_26912724_26912877_26913099_26913262_26913546_26913656_26914194_26914348_26914596_26914806_26915230_26915335_26915912_26916120_26917152
ENSMUSG00000036073.18_0	chr4	+	1585	11	FSM	ENSMUSG00000036073.18	ENSMUST00000084695.11	1595	11	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCAGAGGAGTAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	41755236	41758694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41755653_41755960_41756131_41756346_41756423_41756512_41756562_41756681_41756812_41756938_41756996_41757155_41757279_41757459_41757593_41757694_41757779_41758083_41758239_41758502
ENSMUSG00000036073.18_5	chr4	+	766	7	FSM	ENSMUSG00000036073.18	ENST00000556278.1	771	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGTGGAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41755567	41764878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41755653_41755960_41756131_41756938_41756996_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000036078.17_0	chr4	-	1624	4	FSM	ENSMUSG00000036078.17	ENSMUST00000059354.15	1640	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCGTTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41741351	41738500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41739581_41740549_41740643_41740775_41740977_41741101
ENSMUSG00000036078.17_1	chr4	-	1532	3	FSM	ENSMUSG00000036078.17	ENSMUST00000071561.7	1547	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGTTTCGTTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	41741352	41738500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41739581_41740775_41740977_41741101
ENSMUSG00000036086.17_0	chr1	-	4202	21	FSM	ENSMUSG00000036086.17	ENSMUST00000086614.12	4210	21	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATATTTTTAAATTATG	NA	NA	NA	NA	NA	NA	NA	NA	128030198	127881927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_127882803_127884273_127884406_127887446_127887838_127888495_127888607_127891497_127891641_127892799_127892902_127895614_127895707_127900683_127900882_127903875_127904282_127915733_127915884_127920536_127920717_127924589_127924710_127927077_127927198_127943779_127943897_127945294_127945467_127960585_127960672_127964134_127964367_127968554_127968734_127985718_127985738_128019579_128019748_128029989
ENSMUSG00000036087.19_0	chr5	+	4805	8	FSM	ENSMUSG00000036087.19	ENSMUST00000144843.8	4833	8	18	10	18	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAATCTATATTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	73071664	73136162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73131873_73132190_73133339
ENSMUSG00000036087.19_2	chr5	+	4816	9	FSM	ENSMUSG00000036087.19	ENSMUST00000143829.5	4828	9	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAATGTTTATTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	73071716	73136147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73072357_73098634_73098784_73105904_73106070_73112669_73112832_73114635_73114996_73115491_73115630_73123146_73123225_73131873_73132190_73133339
ENSMUSG00000036091.9_0	chr9	+	1172	2	FSM	ENSMUSG00000036091.9	ENST00000450982.6	1188	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTAGAGGAATTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	107462002	107464083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107462865_107463773
ENSMUSG00000036093.8_0	chr2	-	5225	6	FSM	ENSMUSG00000036093.8	ENSMUST00000036541.8	5239	6	8	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATATATATTCTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	52314905	52287968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314601
ENSMUSG00000036093.8_3	chr2	-	651	5	ISM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	8197	7	8197	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACCACCCGTTTGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	52306708	52292238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647
ENSMUSG00000036093.8_4	chr2	-	729	6	FSM	ENSMUSG00000036093.8	ENST00000428992.2	736	6	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCCGTTTGCGCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	52314901	52292234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52292445_52294917_52295070_52302073_52302158_52306075_52306224_52306647_52306709_52314827
ENSMUSG00000036095.12_0	chr12	+	5260	26	FSM	ENSMUSG00000036095.12	ENST00000402815.6	5268	26	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTGTGGGTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	37930809	38683210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_37930954_38031753_38032010_38134165_38134243_38137571_38137593_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216741_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_15	chr12	+	5104	25	FSM	ENSMUSG00000036095.12	ENST00000399322.7	5116	25	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGTGTGGGTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	38031768	38683210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_38032010_38134165_38134243_38137571_38137593_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216738_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101_38654163_38680581
ENSMUSG00000036095.12_25	chr12	+	2312	24	FSM	ENSMUSG00000036095.12	ENST00000406247.7	2322	24	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGTATCAAATGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38031930	38654161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_38032010_38134165_38134243_38137571_38137593_38150362_38150517_38164531_38164673_38170604_38170655_38174167_38174243_38177262_38177383_38186539_38186658_38189403_38189493_38189568_38189686_38197501_38197601_38216738_38216775_38223725_38223843_38234896_38234971_38240058_38240134_38264301_38264388_38266017_38266108_38277961_38278123_38379991_38380057_38477402_38477494_38488537_38488734_38652714_38652836_38654101
ENSMUSG00000036097.9_0	chr19	+	6229	20	FSM	ENSMUSG00000036097.9	ENSMUST00000096053.5	6249	20	14	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGGTGCCTTTGTCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	44919603	44971621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926859_44929897_44930866_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ENSMUSG00000036097.9_1	chr19	+	2158	6	FSM	ENSMUSG00000036097.9	ENST00000370271.7	2172	6	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATAAGCTGTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	44919614	44931965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44919890_44922550_44922595_44923371_44924106_44926803_44926863_44929897_44930866_44931887
ENSMUSG00000036097.9_3	chr19	+	4331	16	FSM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATATATCCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	44931295	44971727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44931379_44931887_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ENSMUSG00000036097.9_9	chr19	+	4250	15	ISM	ENSMUSG00000036097.9	ENSMUST00000237505.2	4347	16	595	11	595	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATATATCCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	44931885	44971727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_44931959_44936368_44936492_44937410_44937579_44940507_44940611_44947443_44947520_44949172_44949315_44955405_44955509_44955941_44956119_44957475_44957574_44960036_44960125_44961572_44961705_44962046_44962125_44964067_44964155_44967599_44967669_44968994
ENSMUSG00000036098.16_0	chr19	-	3334	26	FSM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTGCCTCCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	10217968	10187753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383_10206472_10217922
ENSMUSG00000036098.16_1	chr19	-	3276	25	ISM	ENSMUSG00000036098.16	ENSMUST00000189897.2	3339	26	11509	5	11509	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCTGCCTCCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	10206459	10187753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_10187830_10187962_10188038_10189071_10189178_10189509_10189585_10189805_10189894_10191422_10191675_10192123_10192292_10192380_10192470_10193105_10193175_10193424_10193514_10193783_10193857_10193981_10194143_10194783_10194894_10195511_10195624_10195827_10196029_10196401_10196493_10196885_10196997_10197158_10197236_10198541_10198738_10200480_10200605_10200680_10200932_10201735_10202016_10202812_10202875_10206016_10206281_10206383
ENSMUSG00000036099.17_0	chr10	-	11130	12	FSM	ENSMUSG00000036099.17	ENSMUST00000119818.8	11138	12	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTGTGTGTGTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	93871672	93797384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829529_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036099.17_11	chr10	-	4468	12	FSM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	8	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAGAAAAGAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93871602	93803964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821_93842957_93871531
ENSMUSG00000036099.17_14	chr10	-	4397	11	ISM	ENSMUSG00000036099.17	ENSMUST00000047711.13	4479	12	28654	3	28611	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGAAGAAAAGAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	93842956	93803964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_93806567_93809696_93809905_93810306_93810408_93816175_93816370_93820023_93820356_93826001_93826150_93829378_93829517_93832699_93832976_93836212_93836386_93839854_93839945_93842821
ENSMUSG00000036103.10_0	chr18	+	8002	10	FSM	ENSMUSG00000036103.10	ENSMUST00000234965.2	8024	10	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAAAGATGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	9707606	9882634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_9707760_9720920_9720972_9840238_9840362_9846786_9846886_9848103_9849151_9858545_9859035_9859837_9859975_9866743_9866854_9874788_9874935_9876987
ENSMUSG00000036104.13_0	chr1	+	4243	24	FSM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGACTTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127796509	127871605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_127796567_127796661_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036104.13_8	chr1	+	4183	23	ISM	ENSMUSG00000036104.13	ENSMUST00000037649.6	4243	24	155	0	116	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGACTTGTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127796664	127871605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_127796718_127801816_127801893_127816892_127817026_127818754_127818834_127829315_127829436_127831408_127831575_127837587_127837688_127843375_127843458_127845957_127846027_127847304_127847379_127852464_127852558_127853011_127853179_127855196_127855287_127855685_127855859_127858126_127858182_127858443_127858816_127862153_127862292_127865074_127865303_127865725_127865823_127865934_127866039_127866311_127866428_127866782_127866886_127870110
ENSMUSG00000036106.16_0	chr15	+	1713	9	FSM	ENSMUSG00000036106.16	ENSMUST00000171460.8	1719	9	3	3	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84553823	84587871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84553907_84565400_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUSG00000036106.16_1	chr15	+	1806	8	FSM	ENSMUSG00000036106.16	ENSMUST00000065499.5	1830	8	22	2	22	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTCCTGTCTGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84565224	84587871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84565521_84572103_84572185_84577664_84577714_84577959_84578018_84583321_84583414_84583791_84583933_84585564_84585701_84586918
ENSMUSG00000036109.18_0	chrX	-	4640	7	FSM	ENSMUSG00000036109.18	ENSMUST00000114875.8	4649	7	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTTTAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	50294703	50206148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50294650
ENSMUSG00000036109.18_2	chrX	-	4582	6	ISM	ENSMUSG00000036109.18	ENSMUST00000041495.14	1803	7	7052	-2808	7052	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTTTAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	50228240	50206148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080
ENSMUSG00000036109.18_4	chrX	-	2222	8	FSM	ENSMUSG00000036109.18	ENSMUST00000114876.9	2243	8	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATTACGGAGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	50294856	50208966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50253294_50253542_50294650
ENSMUSG00000036109.18_5	chrX	-	1793	7	FSM	ENSMUSG00000036109.18	ENSMUST00000041495.14	1803	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATTACGGAGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	50235292	50208966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_50209896_50212693_50212789_50217797_50217949_50218981_50219219_50220305_50220498_50228080_50228246_50235268
ENSMUSG00000036111.9_0	chr7	-	1274	4	FSM	ENSMUSG00000036111.9	ENSMUST00000036992.9	1282	4	8	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACATGACTGCATTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108769718	108737778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108769189
ENSMUSG00000036111.9_1	chr7	-	888	4	FSM	ENSMUSG00000036111.9	ENSMUST00000207178.2	912	4	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCAGCCTGTACAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	108774397	108737888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_108738184_108739788_108739915_108742662_108742877_108774144
ENSMUSG00000036112.16_0	chr10	-	4405	11	FSM	ENSMUSG00000036112.16	ENSMUST00000047910.15	4424	11	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAATAAATTTTGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93725667	93694360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_22	chr10	-	1801	10	FSM	ENSMUSG00000036112.16	ENST00000261220.13	1817	10	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGAGAGATACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	93725564	93696795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93722855_93722964_93725399
ENSMUSG00000036112.16_26	chr10	-	2536	12	FSM	ENSMUSG00000036112.16	ENSMUST00000180840.8	2551	12	9	6	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGAGAGATACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	93727055	93696795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93722855_93722964_93725399_93726137_93726958
ENSMUSG00000036112.16_42	chr10	-	1857	11	FSM	ENSMUSG00000036112.16	ENSMUST00000181091.8	1876	11	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTGAGAGATACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	93725623	93696795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715436_93715934_93716001_93722855_93722964_93725399
ENSMUSG00000036112.16_67	chr10	-	1739	10	FSM	ENSMUSG00000036112.16	ENST00000550777.5	1762	10	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAAAGACATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	93725563	93696814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_93697465_93698238_93698355_93698791_93698896_93701268_93701366_93704728_93704824_93705978_93706161_93707349_93707512_93715401_93715505_93715934_93716001_93725399
ENSMUSG00000036114.4_0	chr4	-	782	1	ISM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	720	0	720	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41712814	41712032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_41712000_41712800
ENSMUSG00000036114.4_1	chr4	-	853	2	FSM	ENSMUSG00000036114.4	ENSMUST00000038434.4	856	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGCCTGTTGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	41713531	41712032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41712815_41713460
ENSMUSG00000036120.11_0	chr8	-	3596	9	FSM	ENSMUSG00000036120.11	ENSMUST00000075724.9	3609	9	3	10	3	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAAACACTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	70591801	70583465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588215_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000036120.11_2	chr8	-	1109	9	FSM	ENSMUSG00000036120.11	ENSMUST00000212320.2	1121	9	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGAAGGTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	70591744	70585925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70586114_70586875_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588185_70588282_70588859_70588941_70590678_70590874_70591570
ENSMUSG00000036120.11_3	chr8	-	446	5	FSM	ENSMUSG00000036120.11	ENST00000456252.7	460	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCAAAGGTGGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70588939	70586884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70586957_70587261_70587329_70587688_70587815_70587940_70588042_70588859
ENSMUSG00000036120.11_4	chr8	-	366	4	ISM	ENSMUSG00000036120.11	ENST00000456252.7	460	5	903	9	903	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCAAAGGTGGGCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70588041	70586884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_70586957_70587261_70587329_70587688_70587815_70587940
ENSMUSG00000036123.9_0	chr13	+	1814	12	FSM	ENSMUSG00000036123.9	ENST00000447821.1	1834	12	15	5	15	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGGGAGCGCGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	74298799	74312433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74299082_74303207_74303369_74305103_74305183_74305723_74305902_74306793_74307015_74307347_74307553_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801_74311932_74312282
ENSMUSG00000036123.9_3	chr13	+	1747	13	FSM	ENSMUSG00000036123.9	ENST00000457608.1	1756	13	1	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGTAACTGCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74305108	74314173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74305183_74305723_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801_74311932_74312282_74312460_74312642_74312716_74313416_74313489_74313961
ENSMUSG00000036123.9_7	chr13	+	1676	12	ISM	ENSMUSG00000036123.9	ENST00000457608.1	1756	13	615	6	615	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTAACTGCTTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	74305722	74314175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_74305902_74306793_74307015_74307347_74307551_74308339_74308430_74308545_74308617_74309815_74309946_74311138_74311255_74311801_74311932_74312282_74312460_74312642_74312716_74313416_74313489_74313961
ENSMUSG00000036136.10_0	chr12	+	3074	2	FSM	ENSMUSG00000036136.10	ENSMUST00000041133.10	3088	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCTTTTGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	31123868	31130245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_31125322_31128624
ENSMUSG00000036138.17_0	chr9	+	1744	12	FSM	ENSMUSG00000036138.17	ENSMUST00000039784.12	1762	12	13	5	13	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	2284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGGTGCTTGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	119170372	119179360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119170752_119170890_119170985_119171788_119171847_119173238_119173319_119173531_119173575_119175535_119175635_119176795_119176877_119177646_119177838_119177986_119178167_119178419_119178476_119178557_119178704_119179023
ENSMUSG00000036139.7_0	chr15	+	2371	3	FSM	ENSMUSG00000036139.7	ENSMUST00000001706.7	2374	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCCGGCTGGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	102885469	102893531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102885537_102889523_102890623_102892326
ENSMUSG00000036139.7_1	chr15	+	1217	3	FSM	ENSMUSG00000036139.7	ENST00000508190.1	1224	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAAAACTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102885495	102892907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102885537_102890027_102890623_102892326
ENSMUSG00000036139.7_2	chr15	+	1174	2	ISM	ENSMUSG00000036139.7	ENST00000508190.1	1224	3	4534	7	4534	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAAAACTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	102890029	102892907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102890623_102892326
ENSMUSG00000036155.14_0	chr1	+	8419	18	FSM	ENSMUSG00000036155.14	ENSMUST00000038361.11	8436	18	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTGGTAGTGATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	127132768	127416070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_127133165_127177526_127177577_127234370_127234754_127248340_127248503_127292884_127292962_127294139_127294230_127310657_127310730_127312504_127312667_127315079_127315250_127318480_127318616_127325243_127325378_127339863_127339998_127373978_127374129_127387572_127387720_127396928_127397046_127399237_127399313_127407201_127407360_127410263
ENSMUSG00000036160.14_0	chr2	-	2960	5	FSM	ENSMUSG00000036160.14	ENSMUST00000047632.14	2971	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATATTTTGTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	26792885	26780451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26782738_26782878_26783080_26789348_26789438_26789740_26789945_26792705
ENSMUSG00000036167.17_0	chr15	+	1127	8	FSM	ENSMUSG00000036167.17	ENSMUST00000109256.11	1154	8	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATCTACAATAGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	93296244	93387176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_1	chr15	+	3556	10	FSM	ENSMUSG00000036167.17	ENSMUST00000049122.16	3573	10	0	17	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGCAAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93296277	93389374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93296343_93308572_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_10	chr15	+	3461	8	FSM	ENSMUSG00000036167.17	ENSMUST00000165935.2	3473	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGCAAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93296351	93389374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93296586_93308572_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_17	chr15	+	3489	9	ISM	ENSMUSG00000036167.17	ENSMUST00000049122.16	3573	10	12302	12	7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATGTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	93308579	93389379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_93308665_93318164_93318372_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_18	chr15	+	3284	8	ISM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	12292	5	0	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGCAAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93308572	93389374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036167.17_21	chr15	+	1085	8	FSM	ENSMUSG00000036167.17	ENST00000317560.13	1096	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTTACTTGCCACGGGC	NA	NA	NA	NA	NA	NA	NA	NA	93308583	93398119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93308665_93321894_93321957_93339381_93339594_93353331_93353412_93357552_93357673_93362985_93363127_93386854_93386981_93397856
ENSMUSG00000036167.17_3	chr15	+	3346	9	FSM	ENSMUSG00000036167.17	ENSMUST00000068457.15	3351	9	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGCAAAAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	93296280	93389374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93296343_93308572_93308665_93321894_93321957_93339381_93339594_93349997_93350055_93353331_93353412_93357552_93357673_93362985_93363127_93386854
ENSMUSG00000036168.16_0	chr10	+	813	4	Fusion	ENSMUSG00000036168.16_ENSMUSG00000097407.2	novel	1859	4	NA	NA	-6384	5331	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCGGCCTGACCTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	93418890	93425520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr10_+_93419395_93419893_93419957_93423859_93423988_93425402
ENSMUSG00000036169.7_0	chr12	+	1787	3	FSM	ENSMUSG00000036169.7	ENST00000396652.1	1803	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTCAACGCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36364112	36368360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_36364498_36365600_36365673_36367030
ENSMUSG00000036180.16_0	chr8	-	4984	12	FSM	ENSMUSG00000036180.16	ENSMUST00000177851.9	5007	12	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATGGACCAAATGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	70448870	70359735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70362625_70364326_70364520_70365551_70365875_70367168_70367449_70368933_70369099_70369209_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUSG00000036180.16_4	chr8	-	3799	13	FSM	ENSMUSG00000036180.16	ENSMUST00000065169.12	3812	13	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACCAAAAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70449026	70361124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369102_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUSG00000036180.16_7	chr8	-	3602	13	FSM	ENSMUSG00000036180.16	ENSMUST00000212478.2	3622	13	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATGCTCACCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70449020	70361312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70448592
ENSMUSG00000036180.16_9	chr8	-	3340	13	FSM	ENSMUSG00000036180.16	ENSMUST00000116463.4	3363	13	16	7	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATGCTCACCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70426905	70361312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70362625_70364326_70364520_70364813_70364889_70365572_70365875_70367168_70367449_70368933_70369099_70369218_70369351_70370092_70370183_70370372_70370505_70370595_70370729_70388428_70388687_70403302_70403405_70426739
ENSMUSG00000036181.3_0	chr13	+	1547	1	FSM	ENSMUSG00000036181.3	ENSMUST00000040914.3	1560	1	8	5	8	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	429	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCACTGTTGGACTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	23922798	23924345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23922800_23924300
ENSMUSG00000036186.6_0	chr2	+	1606	5	FSM	ENSMUSG00000036186.6	ENSMUST00000074240.4	1622	5	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACACCCGGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	26518476	26526501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26518712_26522615_26522751_26524799_26524908_26524998_26525176_26525550
ENSMUSG00000036188.5_0	chr12	+	2444	10	FSM	ENSMUSG00000036188.5	ENSMUST00000041640.5	2456	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTCATCTTGTTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	36207118	36247284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_36207423_36215868_36215934_36220447_36220587_36226578_36226678_36232346_36232508_36236724_36236940_36237648_36237785_36243668_36243798_36244982_36245113_36246218
ENSMUSG00000036192.16_0	chr19	-	8726	10	FSM	ENSMUSG00000036192.16	ENSMUST00000040153.15	8759	10	8	25	8	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAGAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	18978473	18907993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_18915400_18929521_18929635_18932405_18932517_18934590_18934699_18937772_18937906_18939388_18939511_18954944_18955347_18960705_18960848_18965394_18965481_18978370
ENSMUSG00000036192.16_1	chr19	-	9261	10	FSM	ENSMUSG00000036192.16	ENSMUST00000112832.8	9293	10	7	25	7	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAGAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	19088553	18907993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_18915400_18929521_18929635_18932405_18932517_18934590_18934699_18937772_18937906_18939388_18939511_18954944_18955347_18960705_18960848_18965394_18965481_19087915
ENSMUSG00000036199.10_0	chr8	-	1234	5	FSM	ENSMUSG00000036199.10	ENSMUST00000110167.5	1251	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATGTTGACTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	70355199	70346837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70347061_70347153_70347226_70347891_70347971_70354191_70354383_70354530
ENSMUSG00000036202.17_0	chr2	+	7514	35	FSM	ENSMUSG00000036202.17	ENST00000428287.6	7514	35	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATGCATATTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	51962827	52011483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_51962879_51963148_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUSG00000036202.17_43	chr2	+	7458	34	FSM	ENSMUSG00000036202.17	ENST00000430328.6	7466	34	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATGCATATTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	51963153	52011483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_51963266_51964258_51964338_51966092_51966190_51966992_51967121_51967204_51967300_51968342_51968533_51971237_51971331_51972676_51972816_51975038_51975191_51978659_51978778_51979535_51979701_51980185_51980297_51982053_51982117_51982291_51982393_51983514_51983602_51984600_51984675_51985833_51986015_51987928_51988037_51988368_51988519_51988864_51988965_51993444_51993710_51994557_51994601_51995446_51995650_51996912_51997013_51997649_51997770_51998451_51998604_51999203_51999288_51999362_51999415_51999922_52003013_52006259_52006407_52006846_52006963_52009028_52009183_52010271_52010381_52011003
ENSMUSG00000036206.13_0	chr1	+	4977	6	FSM	ENSMUSG00000036206.13	ENSMUST00000066279.11	4995	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTTTATTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	88998148	89082784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_88998320_89034979_89035059_89065280_89065526_89071271_89073629_89079921_89080111_89080848
ENSMUSG00000036208.14_0	chr16	+	2858	9	FSM	ENSMUSG00000036208.14	ENSMUST00000048788.14	2866	9	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGCATCAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44544664	44557640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44544832_44547390_44547546_44549604_44549685_44549944_44550077_44550482_44550561_44551694_44552060_44552420_44552483_44554903_44555161_44556078
ENSMUSG00000036214.15_0	chr17	+	959	3	FSM	ENSMUSG00000036214.15	ENSMUST00000040177.7	976	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCAGAGCTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	37269492	37276506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37269595_37275248_37275325_37275725
ENSMUSG00000036214.15_3	chr17	+	1009	3	FSM	ENSMUSG00000036214.15	ENSMUST00000173814.2	1020	3	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCAGAGCTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	37269535	37276506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37269688_37275248_37275325_37275725
ENSMUSG00000036223.17_0	chr18	-	2610	7	FSM	ENSMUSG00000036223.17	ENSMUST00000040188.16	2630	7	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACATCAAAGGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	74340837	74328376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340600
ENSMUSG00000036223.17_1	chr18	-	2584	7	FSM	ENSMUSG00000036223.17	ENSMUST00000177604.2	2605	7	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCACATCAAAGGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	74340875	74328376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_74330123_74330584_74330755_74332970_74333109_74335660_74335759_74337334_74337460_74339859_74339956_74340664
ENSMUSG00000036223.17_2	chr18	-	655	5	FSM	ENSMUSG00000036223.17	ENST00000285116.8	676	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAGGCTTTTGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	74337446	74329979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_74330123_74330584_74330755_74332970_74333099_74335656_74335759_74337334
ENSMUSG00000036225.16_0	chr18	-	2092	5	FSM	ENSMUSG00000036225.16	ENST00000408011.7	2108	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTGAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	15197483	15101812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_15102753_15107036_15107343_15119392_15119538_15140752_15140932_15196961
ENSMUSG00000036241.4_0	chr4	+	3573	5	FSM	ENSMUSG00000036241.4	ENSMUST00000040008.4	3600	5	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGTGAAATAAAAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	41135753	41193364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41136247_41174040_41174128_41183244_41183343_41189151_41189287_41190604
ENSMUSG00000036244.6_0	chr9	-	859	9	FSM	ENSMUSG00000036244.6	ENST00000535547.6	870	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAGGAGGTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58277609	58267728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270199_58270295_58270407_58271055_58271151_58273902_58274007_58277548
ENSMUSG00000036244.6_1	chr9	-	797	8	ISM	ENSMUSG00000036244.6	ENST00000535547.6	870	9	3604	11	3604	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAGGAGGTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58274005	58267728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270199_58270295_58270407_58271055_58271151_58273902
ENSMUSG00000036244.6_2	chr9	-	788	8	ISM	ENSMUSG00000036244.6	ENST00000562056.1	867	9	3377	7	3377	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAGGTAAGCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	58274232	58267724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270199_58271055_58271151_58273902_58274007_58274135
ENSMUSG00000036244.6_3	chr9	-	855	9	FSM	ENSMUSG00000036244.6	ENST00000562056.1	867	9	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAAGGAGGTAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58277608	58267728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58267801_58268463_58268581_58269307_58269409_58269660_58269758_58270097_58270199_58271055_58271151_58273902_58274007_58274135_58274244_58277548
ENSMUSG00000036246.15_0	chr8	+	3922	21	FSM	ENSMUSG00000036246.15	ENSMUST00000036074.15	3933	21	10	1	-1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTCTTTGTGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70261338	70274519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372_70270761_70273083_70273151_70273246
ENSMUSG00000036246.15_1	chr8	+	3419	19	FSM	ENSMUSG00000036246.15	ENSMUST00000123453.2	3443	19	23	1	23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGAGATATGGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	70261362	70271621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70261471_70262423_70262509_70263279_70263368_70263451_70263510_70263807_70263934_70264017_70264083_70264182_70264291_70266265_70266347_70266431_70266603_70266687_70266826_70267044_70267242_70268083_70268194_70268263_70268342_70268700_70268779_70268858_70269014_70269386_70269576_70269652_70269791_70269882_70270080_70270372
ENSMUSG00000036249.17_0	chr2	-	2025	5	FSM	ENSMUSG00000036249.17	ENSMUST00000102767.8	2057	5	12	20	12	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTTACAGAAAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	51825007	51814479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_51815947_51816692_51816773_51819671_51819862_51822411_51822536_51824843
ENSMUSG00000036256.14_0	chr5	-	1094	5	FSM	ENSMUSG00000036256.14	ENSMUST00000046746.10	1116	5	11	11	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	4494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAGTAAATTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77555877	77497097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77497347_77499074_77499202_77499759_77499877_77503408_77503519_77555386
ENSMUSG00000036257.16_0	chr12	+	2713	13	FSM	ENSMUSG00000036257.16	ENSMUST00000122902.8	2728	13	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATATGAAAAAACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	44268167	44358875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_44268244_44277338_44277396_44278002_44278214_44301367_44301557_44330093_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ENSMUSG00000036257.16_12	chr12	+	2941	8	FSM	ENSMUSG00000036257.16	ENSMUST00000143771.2	2974	8	27	6	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATGGTTGCCTGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44329382	44359120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44354701_44354898_44358107
ENSMUSG00000036257.16_3	chr12	+	13485	10	FSM	ENSMUSG00000036257.16	ENSMUST00000043082.16	13507	10	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGGAAAACGCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	44315940	44369303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_44316085_44329360_44330488_44330575_44330726_44334953_44335106_44337348_44337444_44342680_44342853_44346016_44346075_44351693_44351889_44354701_44354898_44358107
ENSMUSG00000036270.17_0	chr8	+	4762	29	FSM	ENSMUSG00000036270.17	ENSMUST00000040254.16	4780	29	12	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTGTCTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	106607524	106619851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_14	chr8	+	4632	29	FSM	ENSMUSG00000036270.17	ENSMUST00000119261.8	4645	29	2	11	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106607584	106619829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614941_106615019_106615151_106615230_106615388_106615735_106616173_106616304_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036270.17_3	chr8	+	4726	29	FSM	ENSMUSG00000036270.17	ENST00000358933.10	4744	29	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAGAAAGTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106607530	106619829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106607791_106611132_106611290_106611664_106611777_106612065_106612166_106612414_106612605_106612719_106612868_106612950_106613056_106613381_106613492_106613585_106613670_106613749_106613846_106613932_106614036_106614137_106614319_106614413_106614487_106614585_106614678_106614752_106614956_106615042_106615151_106615230_106615388_106615735_106616173_106616256_106616362_106616450_106616604_106616692_106616730_106616871_106617050_106617153_106617310_106617396_106617513_106617599_106617766_106617850_106618038_106618127_106618348_106618898_106619063_106619301
ENSMUSG00000036273.16_0	chr15	+	8265	51	FSM	ENSMUSG00000036273.16	ENSMUST00000060642.7	8275	51	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGGAATTATCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	91557381	91700317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_91557641_91557822_91557909_91563980_91564091_91567295_91567385_91569934_91570070_91573030_91573166_91580480_91580613_91584085_91584206_91584548_91584692_91584779_91584860_91586372_91586480_91589308_91589439_91593466_91593592_91596958_91597066_91607294_91607440_91607968_91608109_91610135_91610265_91610339_91610511_91613118_91613378_91615667_91615857_91618191_91618311_91620789_91620860_91621305_91621524_91622927_91623179_91623464_91623614_91626453_91626548_91629900_91630088_91631854_91632037_91633863_91634094_91634426_91634555_91636344_91636564_91639992_91640195_91641182_91641272_91648834_91649023_91649879_91650035_91651515_91651663_91657024_91657217_91659098_91659246_91662628_91662730_91664021_91664213_91671168_91671330_91680199_91680371_91681624_91681726_91686041_91686237_91687488_91687683_91689099_91689173_91690945_91691131_91695194_91695348_91696394_91696604_91698864_91698937_91699616
ENSMUSG00000036275.14_0	chr11	+	2451	3	FSM	ENSMUSG00000036275.14	ENSMUST00000036952.5	2467	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4734	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGTATAAATCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	52287264	52299544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_52287431_52293872_52294385_52297771
ENSMUSG00000036278.8_0	chr19	+	1217	11	FSM	ENSMUSG00000036278.8	ENSMUST00000040261.7	1228	11	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCTGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	7034185	7175419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7034551_7042832_7042935_7043454_7043572_7162940_7162971_7173778_7173896_7174153_7174276_7174369_7174401_7174515_7174590_7174896_7174979_7175066_7175102_7175277
ENSMUSG00000036281.14_0	chr2	-	4332	23	FSM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	27	4	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAAAAAGCAATGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	26270638	26252789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505_26268649_26270560
ENSMUSG00000036281.14_2	chr2	-	4258	22	ISM	ENSMUSG00000036281.14	ENSMUST00000035427.11	4363	23	2013	4	2009	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAAAAAGCAATGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	26268652	26252789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_26253033_26253649_26253781_26254631_26256050_26256420_26256449_26257202_26257314_26257746_26257818_26258155_26258421_26259150_26259625_26259923_26260004_26260797_26260893_26262742_26262838_26262985_26263093_26263330_26263479_26264032_26264198_26264503_26264577_26264654_26264760_26265619_26265702_26266166_26266246_26266611_26266738_26266880_26267049_26268032_26268080_26268505
ENSMUSG00000036282.16_0	chr14	+	4437	5	FSM	ENSMUSG00000036282.16	ENSMUST00000153488.9	4446	5	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATACAGCTGTGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	49409689	49428340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_49409835_49410072_49410851_49415508_49415633_49418162_49418219_49425006
ENSMUSG00000036282.16_1	chr14	+	4410	4	FSM	ENSMUSG00000036282.16	ENSMUST00000037362.6	4464	4	46	8	46	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTTGGAAATAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	49410100	49428480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_49410875_49415526_49415633_49418162_49418219_49425006
ENSMUSG00000036285.11_0	chr5	-	2274	7	FSM	ENSMUSG00000036285.11	ENSMUST00000047860.9	2288	7	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCCATGTATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	77457917	77442028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77442404_77444932_77445051_77447504_77447622_77452032_77452165_77454120_77454324_77455399_77455565_77456753
ENSMUSG00000036291.7_0	chr14	+	6291	8	FSM	ENSMUSG00000036291.7	ENSMUST00000037473.6	6321	8	18	12	17	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAAAGGCATACATAAA	NA	NA	NA	NA	NA	NA	NA	NA	49303969	49328324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_49304322_49311005_49311652_49316151_49316380_49317692_49317833_49318292_49318379_49318467_49318587_49321315_49321413_49323701
ENSMUSG00000036291.7_1	chr14	+	3505	2	FSM	ENSMUSG00000036291.7	ENSMUST00000228238.2	3514	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATACTAGGAAAAAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	49303952	49314141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_49304322_49311005
ENSMUSG00000036295.6_0	chr12	-	3415	2	FSM	ENSMUSG00000036295.6	ENST00000308478.10	3430	2	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATCATCTGATTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	41535940	41501671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_41504671_41535524
ENSMUSG00000036299.6_0	chr18	+	959	3	FSM	ENSMUSG00000036299.6	ENSMUST00000040284.6	979	3	13	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGTGGTTCCTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75138951	75142997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75139086_75141721_75141898_75142348
ENSMUSG00000036299.6_2	chr18	+	1257	3	FSM	ENSMUSG00000036299.6	ENSMUST00000237263.2	1266	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGATGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	75138979	75143223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75139186_75141721_75141898_75142348
ENSMUSG00000036304.15_0	chr16	-	5728	5	FSM	ENSMUSG00000036304.15	ENSMUST00000231700.2	5751	5	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTGTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	43800138	43785402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_43789777_43791761_43791930_43793830_43794530_43799270_43799441_43799821
ENSMUSG00000036306.14_0	chr8	-	5002	4	FSM	ENSMUSG00000036306.14	ENSMUST00000185176.8	5019	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTTCACGGTCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	69636865	69585325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69588812_69591003_69591802_69593260_69593739_69636625
ENSMUSG00000036306.14_1	chr8	-	1947	4	FSM	ENSMUSG00000036306.14	ENST00000265801.6	1955	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTACAGCCTGTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69593700	69587707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69587746_69588140_69588812_69591003_69591802_69593260
ENSMUSG00000036306.14_3	chr8	-	204	2	FSM	ENSMUSG00000036306.14	ENST00000616228.1	230	2	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGAAAGTGATCCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	69593591	69588339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69588404_69593451
ENSMUSG00000036309.15_0	chr11	+	1428	6	FSM	ENSMUSG00000036309.15	ENSMUST00000037324.12	1440	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	7033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAATGTGTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	52122844	52137682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_52122946_52127663_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036309.15_6	chr11	+	1327	5	ISM	ENSMUSG00000036309.15	ENSMUST00000109072.2	1754	6	4648	3	0	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAAATGTGTTTCTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	52127663	52137682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_52127761_52133413_52133488_52134441_52134586_52135807_52135949_52136811
ENSMUSG00000036315.14_0	chr17	-	698	5	FSM	ENSMUSG00000036315.14	ENSMUST00000172518.8	710	5	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCTTGATGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	37269416	37265252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040_37269189_37269269
ENSMUSG00000036315.14_1	chr17	-	730	4	FSM	ENSMUSG00000036315.14	ENSMUST00000113669.9	742	4	7	5	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCCTTGATGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	37269367	37265252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_37265445_37268457_37268568_37268723_37268825_37269040
ENSMUSG00000036323.15_0	chr5	+	3605	19	FSM	ENSMUSG00000036323.15	ENSMUST00000101087.10	3625	19	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAATGTTTCGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	77122541	77147776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77122680_77124244_77124366_77126429_77126554_77128134_77128279_77128361_77128474_77130081_77130114_77131964_77132090_77132180_77132239_77135713_77135846_77137147_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143763_77144498_77144537_77145269_77145430_77146038
ENSMUSG00000036323.15_9	chr5	+	1739	15	FSM	ENSMUSG00000036323.15	ENST00000580060.1	1744	15	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGACAGTGTACTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77126453	77146212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77126551_77128134_77128279_77128361_77128508_77131964_77132090_77132180_77132239_77135713_77135850_77137156_77137277_77138119_77138193_77139836_77139902_77141988_77142085_77142474_77142579_77142682_77142761_77143624_77143788_77145269_77145430_77146038
ENSMUSG00000036327.19_0	chr2	-	3991	9	FSM	ENSMUSG00000036327.19	ENSMUST00000091263.12	4011	9	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGTGCCTGCAAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26115368	26098653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160
ENSMUSG00000036327.19_6	chr2	-	2536	13	FSM	ENSMUSG00000036327.19	ENSMUST00000036187.9	2559	13	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTAAAGTTGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	26127524	26099146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26099806_26101285_26101472_26103992_26104182_26107644_26107796_26108620_26108744_26110641_26110772_26110920_26111056_26112232_26112379_26114852_26114944_26115160_26115267_26116249_26116299_26118358_26118460_26127054
ENSMUSG00000036330.13_0	chr8	-	1223	12	FSM	ENSMUSG00000036330.13	ENST00000519026.5	1237	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTAAGGCACCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69526555	69492897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69493027_69493233_69493354_69493629_69493694_69495365_69495418_69496576_69496656_69504104_69504166_69517945_69517990_69518207_69518298_69519791_69519885_69520795_69520880_69524714_69524774_69526207
ENSMUSG00000036333.12_0	chr12	+	7391	32	FSM	ENSMUSG00000036333.12	ENSMUST00000066652.7	7409	32	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCACGTGGGCACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	25024936	25109691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_25025062_25032235_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25091244_25091302_25096201_25096235_25097892_25097926_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ENSMUSG00000036333.12_8	chr12	+	5260	28	FSM	ENSMUSG00000036333.12	ENST00000473731.5	5271	28	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAGAGAGAAGTGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	25032266	25107839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_25032377_25036902_25037002_25038530_25038630_25039736_25039836_25040674_25040774_25042208_25042308_25044810_25045009_25047230_25047330_25048704_25048804_25049259_25049359_25051571_25051750_25052987_25053153_25053942_25054123_25055051_25055218_25058057_25058210_25058401_25058692_25060070_25060212_25060893_25061138_25061498_25061588_25063295_25063441_25066888_25067052_25086452_25086632_25088322_25088550_25090454_25090569_25101093_25101226_25102795_25102895_25103796_25104034_25106580
ENSMUSG00000036339.19_0	chr14	+	2196	16	FSM	ENSMUSG00000036339.19	ENSMUST00000227440.2	2222	16	22	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGGACCTTGGGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	48683602	48757821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48757792
ENSMUSG00000036339.19_2	chr14	+	2272	1	FSM	ENSMUSG00000036339.19	ENSMUST00000226400.2	2281	1	7	2	7	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTGTTAAGTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	48683760	48686032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_48683800_48686000
ENSMUSG00000036339.19_3	chr14	+	5472	16	FSM	ENSMUSG00000036339.19	ENSMUST00000111735.10	5485	16	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGTTAAAAAAAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	48683844	48752906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_48684061_48688599_48688632_48689362_48689515_48709780_48709959_48711422_48711537_48714971_48715152_48717760_48717802_48720706_48720791_48722395_48722511_48724197_48724368_48733748_48733921_48737463_48737613_48742701_48742879_48744599_48744654_48746491_48746583_48749359
ENSMUSG00000036352.17_0	chr2	-	1839	10	FSM	ENSMUSG00000036352.17	ENSMUST00000036509.14	1852	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	921	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTACTTGTGTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	25911751	25888559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25889080_25895337_25895477_25896538_25896626_25897730_25897966_25898872_25898982_25899172_25899276_25900533_25900642_25904903_25904978_25906307_25906429_25911408
ENSMUSG00000036356.16_0	chr8	-	3937	10	FSM	ENSMUSG00000036356.16	ENSMUST00000078350.13	3943	10	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGGATTGTGTGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69187794	68809434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247_68841350_68853954_68854172_68913575_68914504_69009623_69009773_69098450_69098588_69187677
ENSMUSG00000036356.16_21	chr8	-	2993	11	FSM	ENSMUSG00000036356.16	ENSMUST00000130214.8	3029	11	11	25	11	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTATTAACCAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	69187755	68810643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_68811366_68814719_68814802_68825271_68825367_68826190_68826370_68841247_68841350_68853954_68854172_68913575_68914504_69009623_69009773_69098450_69098588_69171505_69171810_69187677
ENSMUSG00000036368.9_1	chr17	+	2114	11	FSM	ENSMUSG00000036368.9	ENSMUST00000225357.2	2118	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTGCAATCCTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	79922494	79989678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79922798_79928734_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979778_79979833_79979921_79980003_79989061
ENSMUSG00000036368.9_2	chr17	+	1259	9	FSM	ENSMUSG00000036368.9	ENST00000354545.8	1276	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACCCAATACCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79928743	79989134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79929202_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979866_79980003_79989061
ENSMUSG00000036368.9_8	chr17	+	926	9	FSM	ENSMUSG00000036368.9	ENST00000417700.6	941	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACCCAATACCGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79934106	79989134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79934232_79957730_79957906_79959127_79959231_79966841_79966903_79974299_79974376_79975379_79975458_79977985_79978085_79979866_79980003_79989061
ENSMUSG00000036371.7_0	chr6	+	15458	8	FSM	ENSMUSG00000036371.7	ENSMUST00000042990.7	15474	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAGTGATGGTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	67243618	67274715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_14	chr6	+	1314	8	FSM	ENSMUSG00000036371.7	ENSMUST00000204293.3	1336	8	9	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAACTAAGAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	67244002	67261018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_18	chr6	+	1601	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203077.3	1617	8	11	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAAAGCTTTCACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	67244005	67261290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249122_67249213_67249847_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036371.7_6	chr6	+	1654	8	FSM	ENSMUSG00000036371.7	ENSMUST00000203436.3	1667	8	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTTTAAAGCTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	67243976	67261287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_67244394_67248181_67248333_67248870_67249012_67249140_67249213_67249802_67249923_67254744_67254923_67258631_67258806_67260886
ENSMUSG00000036372.15_0	chr19	+	597	4	FSM	ENSMUSG00000036372.15	ENSMUST00000040372.14	606	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATGTCCATTCTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	10181386	10185188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10181629_10183787_10183898_10184527_10184665_10185080
ENSMUSG00000036372.15_2	chr19	+	437	4	FSM	ENSMUSG00000036372.15	ENSMUST00000166412.2	447	4	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCTCATGTCCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	10183401	10185183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10183489_10183787_10183898_10184527_10184665_10185080
ENSMUSG00000036376.4_0	chr13	-	4442	3	FSM	ENSMUSG00000036376.4	ENSMUST00000041782.4	4456	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCATCTGGGACTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23608028	23602536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23606506_23606652_23606853_23607755
ENSMUSG00000036377.20_0	chr5	+	6835	9	FSM	ENSMUSG00000036377.20	ENSMUST00000120639.9	6826	9	0	-9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGGAATGTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76988445	77021401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76988521_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ENSMUSG00000036377.20_1	chr5	+	6836	9	NIC	ENSMUSG00000036377.20	novel	6835	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGGAATGTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76988445	77021401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_76988522_76988634_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ENSMUSG00000036377.20_3	chr5	+	6758	8	ISM	ENSMUSG00000036377.20	ENSMUST00000163347.8	6835	9	191	0	171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATGGAATGTCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76988636	77021401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_76988771_76996663_76996829_76999182_76999252_77002781_77002965_77004177_77006993_77013846_77014038_77015018_77015182_77018363
ENSMUSG00000036381.14_0	chr3	-	1438	2	FSM	ENSMUSG00000036381.14	ENST00000309170.8	1453	2	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAAATGGAAGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	59060979	59022283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_59023551_59060808
ENSMUSG00000036390.9_0	chr6	-	1199	4	FSM	ENSMUSG00000036390.9	ENSMUST00000043098.9	1223	4	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTCATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	67014375	67012088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_67012757_67013661_67013900_67013993_67014096_67014184
ENSMUSG00000036390.9_1	chr6	-	412	2	FSM	ENSMUSG00000036390.9	ENST00000648742.1	431	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTGCGAGAAAAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	67014295	67012455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_67012757_67014184
ENSMUSG00000036391.17_0	chr11	-	6548	23	FSM	ENSMUSG00000036391.17	ENSMUST00000109097.9	6581	23	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCTTATGAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	51647422	51583100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51586069_51587475_51587580_51591640_51591734_51591984_51592090_51595102_51595241_51597954_51598131_51599761_51599873_51603015_51603190_51604357_51604517_51605951_51606073_51607265_51607473_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUSG00000036391.17_4	chr11	-	2435	13	FSM	ENSMUSG00000036391.17	ENST00000322887.8	2444	13	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTAACATTCTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	51646995	51607510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51608181_51608550_51608607_51612641_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUSG00000036391.17_8	chr11	-	2076	11	FSM	ENSMUSG00000036391.17	ENSMUST00000064297.5	2104	11	23	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTTGTTTTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	51647242	51612521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_51612761_51614410_51614524_51617311_51617422_51620278_51620406_51622629_51622733_51624218_51624392_51624596_51624755_51625410_51625489_51627177_51627349_51634362_51634828_51646903
ENSMUSG00000036398.14_0	chr17	-	1581	3	FSM	ENSMUSG00000036398.14	ENSMUST00000040402.14	1599	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGCACAGTGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	37262595	37259255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_37260447_37260768_37260878_37262314
ENSMUSG00000036402.14_1	chr6	+	4222	5	FSM	ENSMUSG00000036402.14	ENSMUST00000043148.13	4248	5	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAATAAAAGACTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	66873390	66998318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66873512_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUSG00000036402.14_12	chr6	+	1869	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTAATGCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	66873424	66996064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66873500_66891436_66891495_66992708_66992828_66994447
ENSMUSG00000036402.14_18	chr6	+	1794	3	ISM	ENSMUSG00000036402.14	ENSMUST00000114225.8	1876	4	18013	6	17904	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTAATGCCTGGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	66891436	66996064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_66891495_66992708_66992828_66994447
ENSMUSG00000036402.14_19	chr6	+	1031	4	ISM	ENSMUSG00000036402.14	ENSMUST00000114222.4	1354	5	17904	-118	17904	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAAACCTAAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	66891436	66995248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUSG00000036402.14_5	chr6	+	736	4	FSM	ENSMUSG00000036402.14	ENSMUST00000114228.8	748	4	4	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCGAGAATCACTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	66873410	66994905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66873512_66891436_66891495_66992708_66992828_66994447
ENSMUSG00000036402.14_9	chr6	+	1099	5	FSM	ENSMUSG00000036402.14	ENSMUST00000114227.8	1125	5	17	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAAAACCTAAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	66873431	66995248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66873500_66891436_66891495_66920808_66920862_66992708_66992828_66994447
ENSMUSG00000036403.16_0	chr5	+	5501	26	FSM	ENSMUSG00000036403.16	ENSMUST00000121979.8	5537	26	27	9	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTCATTCGGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76736574	76794304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76736772_76739561_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ENSMUSG00000036403.16_5	chr5	+	5275	25	FSM	ENSMUSG00000036403.16	ENSMUST00000049060.8	5313	25	30	8	30	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATGTCATTCGGAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	76739590	76794304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76739719_76741038_76741230_76741869_76742038_76743239_76743382_76745203_76745289_76749233_76749363_76750983_76751200_76754568_76754635_76757477_76757617_76759496_76759721_76763484_76763638_76764649_76764803_76769130_76769209_76772473_76772626_76778511_76778628_76778699_76778855_76779271_76779328_76780005_76780175_76781519_76781631_76781998_76782185_76784708_76784919_76785910_76786114_76786768_76786874_76788728_76788843_76792478
ENSMUSG00000036411.11_0	chr9	+	1428	6	FSM	ENSMUSG00000036411.11	ENST00000297063.10	1435	6	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACGCTGAGCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22303042	22355496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22303110_22335408_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036411.11_3	chr9	+	2205	7	FSM	ENSMUSG00000036411.11	ENSMUST00000058868.9	2223	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGAAAACTTTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	22322816	22355967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22323046_22335408_22336104_22341651_22341796_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036411.11_5	chr9	+	1401	6	FSM	ENSMUSG00000036411.11	ENST00000317020.10	1407	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACGCTGAGCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22323005	22355496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22323046_22335408_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036411.11_8	chr9	+	1356	5	FSM	ENSMUSG00000036411.11	ENST00000338533.9	1379	5	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACGCTGAGCTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22335413	22355496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22336104_22342971_22343105_22346390_22346697_22351162_22351261_22355367
ENSMUSG00000036427.6_1	chr7	-	2871	18	FSM	ENSMUSG00000036427.6	ENSMUST00000038027.6	2884	18	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5950	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTCTTAGGGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	33929751	33900757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33901975_33902061_33902129_33902239_33902316_33903453_33903583_33904992_33905070_33905230_33905361_33907030_33907184_33907281_33907326_33907674_33907736_33915380_33915435_33917722_33917768_33918455_33918528_33920038_33920186_33920267_33920352_33926542_33926663_33928352_33928422_33928707_33928799_33929516
ENSMUSG00000036430.9_0	chr17	+	1147	1	FSM	ENSMUSG00000036430.9	ENSMUST00000040434.9	1164	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	1139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGACTTTTGCTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	47201619	47202766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47201600_47202800
ENSMUSG00000036432.9_0	chr3	-	2481	2	FSM	ENSMUSG00000036432.9	ENSMUST00000070368.8	2511	2	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCATTTTCTGCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	58599798	58582365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_58583865_58598816
ENSMUSG00000036435.14_0	chr5	+	3361	20	FSM	ENSMUSG00000036435.14	ENSMUST00000113493.8	3371	20	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGTTGATATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	76677169	76718122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76688593_76688615_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76705665_76705711_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ENSMUSG00000036435.14_11	chr5	+	3159	17	ISM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	3396	9	3396	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGATATTTGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	76680600	76718125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ENSMUSG00000036435.14_3	chr5	+	3260	18	FSM	ENSMUSG00000036435.14	ENSMUST00000049469.13	3272	18	3	9	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGATATTTGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	76677207	76718125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76677310_76680601_76680736_76683400_76683532_76685544_76685705_76689897_76690086_76691301_76691530_76691724_76691858_76693100_76693211_76697298_76697449_76701946_76702053_76706850_76707015_76707564_76707673_76708176_76708254_76709138_76709368_76711076_76711261_76714803_76715004_76715813_76716009_76717464
ENSMUSG00000036437.7_0	chr8	+	736	4	FSM	ENSMUSG00000036437.7	ENST00000509586.5	746	4	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGCTCTGGGGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	67150079	67157911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_67150175_67156434_67156476_67157201_67157278_67157387
ENSMUSG00000036437.7_1	chr8	+	2992	3	FSM	ENSMUSG00000036437.7	ENSMUST00000039303.7	3001	3	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTTTCAGAGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	67150075	67159437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_67150175_67156434_67157278_67157387
ENSMUSG00000036437.7_2	chr8	+	643	3	ISM	ENSMUSG00000036437.7	ENST00000509586.5	746	4	6359	4	6359	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATGCTCTGGGGGAACG	NA	NA	NA	NA	NA	NA	NA	NA	67156432	67157911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_67156476_67157201_67157278_67157387
ENSMUSG00000036438.15_0	chr17	-	1046	5	FSM	ENSMUSG00000036438.15	ENST00000628793.2	1062	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATAACTATTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	87754381	87740818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87741484_87742503_87742562_87743231_87743363_87750123_87750155_87754220
ENSMUSG00000036438.15_16	chr17	-	1145	6	FSM	ENSMUSG00000036438.15	ENST00000456319.6	1160	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAAAAATTACAATTT	NA	NA	NA	NA	NA	NA	NA	NA	87754290	87740865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750186_87754212
ENSMUSG00000036438.15_9	chr17	-	1190	6	FSM	ENSMUSG00000036438.15	ENSMUST00000040440.7	1205	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATTGTTGCTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	87754354	87740845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87741484_87742503_87742640_87743031_87743139_87743218_87743363_87750123_87750155_87754220
ENSMUSG00000036442.9_0	chr8	+	1810	1	FSM	ENSMUSG00000036442.9	ENSMUST00000040445.9	1819	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	969	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTTCGACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106581772	106583582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106581800_106583600
ENSMUSG00000036450.5_0	chr19	+	6185	8	FSM	ENSMUSG00000036450.5	ENSMUST00000040455.5	6194	8	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTATGTGACTTATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	44551296	44564712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_44551494_44551728_44551980_44554316_44554466_44556773_44556920_44557842_44557950_44558331_44558396_44558665_44558777_44559552
ENSMUSG00000036459.16_0	chr7	-	1940	8	FSM	ENSMUSG00000036459.16	ENSMUST00000038537.9	1962	8	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGGACCATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	33832680	33808976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33809665_33816018_33816088_33816736_33816789_33818099_33818231_33818361_33818425_33818563_33818632_33824909_33825012_33831913
ENSMUSG00000036461.17_0	chr14	+	4212	9	FSM	ENSMUSG00000036461.17	ENSMUST00000040131.13	4235	9	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAATATTTCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79718649	79819927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79719078_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_1	chr14	+	3867	9	FSM	ENSMUSG00000036461.17	ENSMUST00000110835.3	3888	9	14	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAATATTTCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79753127	79819927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79753211_79773562_79773863_79798186_79798368_79802901_79803013_79804589_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036461.17_4	chr14	+	1792	8	FSM	ENSMUSG00000036461.17	ENST00000625359.1	1814	8	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACACCAAAGGAATTATG	NA	NA	NA	NA	NA	NA	NA	NA	79773766	79818208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79773863_79798186_79798368_79802901_79803013_79804658_79804755_79806660_79806745_79808162_79808356_79810611_79811059_79817624
ENSMUSG00000036466.18_0	chr9	+	5339	21	FSM	ENSMUSG00000036466.18	ENST00000288745.7	5352	21	6	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTAACATTACAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	64413312	64616474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64413412_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036466.18_1	chr9	+	5546	22	FSM	ENSMUSG00000036466.18	ENST00000409699.6	5570	22	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAATGAAAATTACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	64413317	64616585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64413412_64415989_64416091_64451875_64451969_64545516_64545764_64547295_64547417_64555096_64555234_64560351_64560565_64567621_64567797_64586460_64586582_64587515_64587680_64588671_64588775_64593161_64593309_64593644_64593780_64597283_64597413_64598502_64598632_64599076_64599206_64599636_64599766_64601042_64601280_64607378_64607436_64613008_64613216_64613808_64614796_64614894
ENSMUSG00000036473.17_0	chr17	-	4025	8	ISM	ENSMUSG00000036473.17	ENSMUST00000201089.4	4081	9	15473	3	9911	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCCTGGTGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	24409020	24397531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917
ENSMUSG00000036473.17_1	chr17	-	4066	9	FSM	ENSMUSG00000036473.17	ENSMUST00000201089.4	4081	9	12	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGCCTGGTGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	24424481	24397531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24399651_24400198_24400370_24400729_24400959_24401423_24401520_24401759_24401824_24402667_24402827_24404177_24405262_24408917_24409028_24424447
ENSMUSG00000036478.9_0	chr10	+	4982	2	FSM	ENSMUSG00000036478.9	ENSMUST00000038377.9	5001	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCATCATAAAATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	96452877	96458662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_96453335_96454137
ENSMUSG00000036480.10_0	chr1	+	1869	11	FSM	ENSMUSG00000036480.10	ENST00000617714.2	1885	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATACTCTACATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87111876	87116115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87111985_87112324_87112379_87112474_87112665_87113045_87113146_87113231_87113392_87113615_87113759_87113992_87114156_87114296_87114477_87114605_87114821_87115217_87115325_87115666
ENSMUSG00000036499.10_0	chr10	+	7730	29	FSM	ENSMUSG00000036499.10	ENSMUST00000053484.8	7749	29	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTTATCCAATGACTAT	NA	NA	NA	NA	NA	NA	NA	NA	95776622	95881372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_95776835_95809847_95809941_95825423_95825552_95826116_95826172_95826261_95826328_95829285_95829326_95830746_95830861_95831430_95831553_95832798_95832955_95838748_95838866_95846636_95846976_95847946_95848097_95849167_95849288_95853867_95854072_95855692_95855894_95857468_95857583_95859758_95859915_95861893_95862034_95862418_95862750_95862913_95863016_95864254_95864450_95867372_95867556_95872441_95872628_95873275_95873408_95874554_95874741_95875384_95875624_95876113_95876235_95877301_95877401_95877943
ENSMUSG00000036500.5_0	chr1	+	1477	11	FSM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCTGCAGATGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	87052745	87055438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87052797_87052879_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055175_87055251
ENSMUSG00000036500.5_4	chr1	+	1418	10	ISM	ENSMUSG00000036500.5	ENST00000392027.3	1483	11	142	6	142	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCTGCAGATGAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	87052887	87055438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87052997_87053113_87053230_87053348_87053524_87053601_87053775_87054031_87054167_87054247_87054321_87054449_87054585_87054657_87054850_87055051_87055175_87055251
ENSMUSG00000036501.8_0	chr18	-	3329	21	FSM	ENSMUSG00000036501.8	ENSMUST00000040506.8	3344	21	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTTTTTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34639862	34575404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34575819_34576953_34577056_34578329_34578494_34578584_34578669_34581078_34581175_34581420_34581505_34584260_34584491_34587086_34587169_34587706_34587837_34590716_34590928_34595113_34595262_34596013_34596063_34598208_34598274_34606602_34606739_34620031_34620193_34627209_34627352_34627651_34627830_34630386_34630600_34631020_34631213_34632738_34632906_34639581
ENSMUSG00000036502.15_0	chrX	-	1724	10	FSM	ENSMUSG00000036502.15	ENSMUST00000089056.10	1745	10	11	10	11	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAACAGTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37341295	37285459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37286176_37296886_37297031_37304054_37304218_37313457_37313547_37313930_37314003_37315764_37315834_37321979_37322070_37324717_37324781_37334592_37334736_37341120
ENSMUSG00000036502.15_1	chrX	-	3138	7	FSM	ENSMUSG00000036502.15	ENST00000440464.5	3143	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCACTTACAGGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	37341404	37286188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37288534_37296886_37297031_37315764_37315834_37321979_37322070_37324717_37324781_37334592_37334736_37341120
ENSMUSG00000036503.14_0	chr3	+	2662	10	FSM	ENSMUSG00000036503.14	ENSMUST00000041826.14	2678	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCAGATTGTTTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	57643489	57742643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740906
ENSMUSG00000036503.14_1	chr3	+	2554	10	FSM	ENSMUSG00000036503.14	ENSMUST00000200497.5	2573	10	9	10	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGATTGTTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57643511	57742644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384_57740466_57740993
ENSMUSG00000036503.14_4	chr3	+	1054	9	FSM	ENSMUSG00000036503.14	ENSMUST00000199041.2	1062	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTAATAGTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	57643540	57740645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_57643622_57671677_57671804_57676460_57676542_57686803_57686930_57703618_57703707_57709867_57709959_57714442_57714549_57727927_57728022_57740384
ENSMUSG00000036504.7_0	chr2	-	925	3	FSM	ENSMUSG00000036504.7	ENSMUST00000039156.7	937	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGTCCCTGACTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25465228	25463445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25463712_25464199_25464325_25464694
ENSMUSG00000036513.16_0	chr3	-	2970	5	FSM	ENSMUSG00000036513.16	ENSMUST00000160959.8	2992	5	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACACCTATACGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57559125	57551780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_57554298_57557462_57557637_57558111_57558195_57558842_57558921_57559007
ENSMUSG00000036528.17_0	chr7	+	3004	25	FSM	ENSMUSG00000036528.17	ENST00000684123.1	3015	25	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGCCAACTGCAGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	107236435	107347052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_107236518_107252224_107252440_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383_107343561_107345577_107345644_107346753
ENSMUSG00000036528.17_10	chr7	+	3494	22	FSM	ENSMUSG00000036528.17	ENST00000684215.1	3515	22	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGTAGAAAGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	107264506	107344083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_107265136_107280968_107281062_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107327016_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036528.17_16	chr7	+	2503	21	FSM	ENSMUSG00000036528.17	ENST00000528883.5	2518	21	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATCTACAGAAAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	107284717	107343668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_107284887_107285066_107285181_107296773_107296906_107307986_107308080_107313792_107313905_107315842_107315905_107316911_107316988_107318414_107318519_107320537_107320606_107321310_107321369_107322143_107322186_107326850_107326993_107328345_107328473_107329027_107329157_107337047_107337199_107337481_107337594_107337807_107337897_107338393_107338517_107339714_107339841_107342112_107342302_107343383
ENSMUSG00000036529.18_0	chr15	-	6182	40	FSM	ENSMUSG00000036529.18	ENSMUST00000123791.8	6190	40	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGGCTCCTTTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	89199507	89172439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ENSMUSG00000036529.18_5	chr15	-	6144	41	FSM	ENSMUSG00000036529.18	ENSMUST00000144585.9	6165	41	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAACGACACAATTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	89199448	89172496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89172929_89173014_89173147_89173224_89173313_89173807_89174020_89174125_89174234_89177638_89177870_89177941_89178073_89178147_89178275_89178346_89178533_89178605_89178708_89179335_89179516_89179597_89179780_89180154_89180233_89183685_89183824_89183907_89184105_89184423_89184632_89184730_89184868_89184975_89185155_89186045_89186174_89186384_89186581_89186654_89186729_89186807_89186981_89187079_89187349_89187422_89187582_89187675_89187745_89188012_89188163_89188887_89189001_89189083_89189289_89189365_89189465_89189546_89189676_89189746_89189861_89190197_89190276_89190382_89190497_89190571_89190681_89190780_89190914_89191032_89191139_89191695_89191807_89191889_89192049_89192224_89192363_89192687_89192774_89199264
ENSMUSG00000036533.10_0	chr17	-	2248	2	FSM	ENSMUSG00000036533.10	ENSMUST00000068958.9	2265	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCTAAAATGAACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79662510	79641162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79643146_79662245
ENSMUSG00000036534.7_0	chr8	-	3321	12	FSM	ENSMUSG00000036534.7	ENSMUST00000040481.4	3333	12	3	9	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTAAACTGTGTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	96580164	96562556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580099
ENSMUSG00000036534.7_1	chr8	-	3253	11	ISM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	633	7	633	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCTAAACTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	96579534	96562558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429
ENSMUSG00000036534.7_3	chr8	-	3308	12	FSM	ENSMUSG00000036534.7	ENSMUST00000212270.2	3315	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCTAAACTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	96580167	96562558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96564300_96567041_96567097_96568149_96568350_96568803_96568952_96570387_96570503_96570731_96570790_96571515_96571615_96572426_96572572_96572760_96572960_96575008_96575397_96579429_96579536_96580113
ENSMUSG00000036537.7_0	chrX	+	1214	1	FSM	ENSMUSG00000036537.7	ENSMUST00000046433.7	1223	1	5	4	5	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATCTTTTCTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	36454902	36456116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36454900_36456100
ENSMUSG00000036545.10_0	chr11	+	5041	21	FSM	ENSMUSG00000036545.10	ENSMUST00000142118.3	5079	21	30	8	30	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGAGCTTGGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	50492940	50689165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50493127_50494063_50494459_50558817_50558978_50627992_50628196_50647522_50647607_50664043_50664201_50666140_50666247_50666945_50667090_50667448_50667582_50667957_50668072_50670519_50670666_50672531_50672708_50675429_50675564_50676374_50676499_50677412_50677494_50678015_50678183_50679481_50679642_50682629_50682763_50683472_50683681_50686144_50686275_50687265
ENSMUSG00000036545.10_1	chr11	+	7246	22	FSM	ENSMUSG00000036545.10	ENSMUST00000040523.9	7266	22	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATGACCTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	50492924	50698394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50493127_50494063_50494459_50558817_50558978_50627992_50628196_50647522_50647607_50664043_50664201_50666140_50666247_50666945_50667090_50667448_50667582_50667957_50668072_50670519_50670666_50672531_50672708_50675429_50675564_50676374_50676499_50677412_50677494_50678015_50678183_50679481_50679642_50682629_50682763_50683472_50683681_50686144_50686275_50687265_50687356_50694395
ENSMUSG00000036550.17_1	chr8	-	8369	49	FSM	ENSMUSG00000036550.17	ENSMUST00000098473.11	8390	49	12	9	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGATGGTTGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	96534078	96446087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481592_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_2	chr8	-	8353	49	FSM	ENSMUSG00000036550.17	ENSMUST00000211887.2	8364	49	9	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGATGGTTGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	96534083	96446087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96447114_96447270_96447406_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501351_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_7	chr8	-	8142	48	FSM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTACAGATGGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	96534004	96446090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257_96515533_96533960
ENSMUSG00000036550.17_8	chr8	-	8099	47	ISM	ENSMUSG00000036550.17	ENSMUST00000068452.10	8152	48	18479	2	18479	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAGATGGTTGTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	96515530	96446087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_96447114_96448133_96448267_96449912_96450094_96451143_96451294_96452642_96452817_96454210_96454313_96455242_96455361_96455711_96455876_96457040_96457290_96459719_96459952_96460606_96460777_96460868_96460978_96462313_96462457_96462881_96463074_96466435_96466556_96467357_96467463_96467556_96467698_96468408_96468706_96469731_96469863_96470840_96471019_96471190_96471269_96471570_96471682_96472202_96472320_96473600_96473781_96474886_96475028_96475471_96475703_96478368_96478448_96479129_96479417_96479653_96479779_96481607_96481740_96482719_96482922_96483969_96484121_96486726_96486879_96487130_96487254_96487950_96488071_96489617_96489859_96491084_96491213_96491607_96491779_96496128_96496240_96496371_96496499_96497169_96497339_96498598_96498803_96500059_96500115_96500198_96500268_96501257_96501357_96501906_96502015_96515257
ENSMUSG00000036552.20_0	chr17	+	2523	18	FSM	ENSMUSG00000036552.20	ENSMUST00000097393.11	2535	18	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCTGTCCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	15261478	15284109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15261909_15262509_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15267826_15267925_15268781_15268919_15269725_15269841_15270532_15270636_15271008_15271039_15271832_15271902_15273475_15273650_15277012_15277097_15279021_15279099_15279605_15279732_15280027_15280247_15281330_15281445_15283863
ENSMUSG00000036552.20_14	chr17	+	772	5	ISM	ENSMUSG00000036552.20	ENSMUST00000226599.2	788	6	612	5	-2	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCATGTCCCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	15262507	15266166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308_15265399_15265897
ENSMUSG00000036552.20_15	chr17	+	1013	4	FSM	ENSMUSG00000036552.20	ENSMUST00000226561.2	1019	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAACCAAGAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	15262509	15265910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15262679_15263266_15263407_15264584_15264687_15265308
ENSMUSG00000036553.17_0	chr5	-	3768	14	FSM	ENSMUSG00000036553.17	ENST00000508641.2	3782	14	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCATCCTGACAACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	35876437	35854665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35854913_35857054_35857252_35857600_35857752_35857928_35858052_35859194_35859346_35860694_35860876_35863205_35864917_35868189_35868339_35871406_35871603_35872369_35872447_35873452_35873664_35874273_35874421_35875614_35875721_35876316
ENSMUSG00000036555.15_0	chr5	-	6019	23	FSM	ENSMUSG00000036555.15	ENSMUST00000041783.14	6037	23	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAATTGCAAATTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	140688118	140647584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140651249_140651762_140651964_140656221_140656323_140657098_140657221_140657561_140657682_140660091_140660116_140660832_140661004_140663170_140663262_140663828_140663934_140666470_140666701_140668156_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675567_140675619_140675710_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439_140685488_140687936
ENSMUSG00000036555.15_10	chr5	-	928	10	ISM	ENSMUSG00000036555.15	ENST00000402050.7	989	11	2681	11	2681	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAGAAAAGGTAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140682807	140668167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762
ENSMUSG00000036555.15_4	chr5	-	870	9	FSM	ENSMUSG00000036555.15	ENST00000438376.6	881	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAGAAAAGGTAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140679285	140668167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548_140678684_140679169
ENSMUSG00000036555.15_9	chr5	-	978	11	FSM	ENSMUSG00000036555.15	ENST00000402050.7	989	11	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAGAAAAGGTAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	140685488	140668167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140668213_140669130_140669295_140671799_140671850_140672082_140672156_140673539_140673611_140675679_140675825_140677354_140677426_140678548_140678684_140679169_140679299_140682762_140682809_140685439
ENSMUSG00000036561.10_0	chr15	+	2546	7	FSM	ENSMUSG00000036561.10	ENSMUST00000226221.2	2559	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACCAAAAATAATCATTA	NA	NA	NA	NA	NA	NA	NA	NA	89095777	89144869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89095983_89126362_89126492_89127507_89127663_89130460_89130544_89137221_89137454_89140911_89141053_89143268
ENSMUSG00000036561.10_1	chr15	+	3287	24	FSM	ENSMUSG00000036561.10	ENSMUST00000228284.2	3297	24	7	3	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCAGTGGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	89095810	89170464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89095983_89126362_89126492_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ENSMUSG00000036561.10_2	chr15	+	3359	25	FSM	ENSMUSG00000036561.10	ENSMUST00000238818.2	3378	25	16	3	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGGCAGTGGAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	89095819	89170464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89095983_89126362_89126492_89130460_89130544_89137221_89137465_89140865_89141053_89143268_89143407_89146555_89146622_89149331_89149445_89149807_89149922_89152705_89152833_89154012_89154166_89158172_89158389_89159655_89159721_89161457_89161574_89162901_89162988_89163475_89163557_89163922_89164021_89164209_89164268_89164561_89164687_89164957_89165122_89166050_89166208_89166293_89166383_89167085_89167282_89169981_89170210_89170300
ENSMUSG00000036564.18_0	chr8	+	3081	17	FSM	ENSMUSG00000036564.18	ENSMUST00000041318.14	3101	17	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTACGTGTGTCGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	96404725	96441577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96405012_96423821_96423917_96426740_96426786_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96438952_96438992_96439805
ENSMUSG00000036564.18_5	chr8	+	2944	15	FSM	ENSMUSG00000036564.18	ENSMUST00000073139.14	2966	15	14	8	-12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATCCTACTTCAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	96429678	96441739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96438952_96438992_96439805
ENSMUSG00000036564.18_6	chr8	+	2719	14	FSM	ENSMUSG00000036564.18	ENSMUST00000080666.8	2738	14	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTCTACGTGTGTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96429701	96441576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96429806_96432815_96432922_96433158_96433280_96433364_96433428_96433556_96433618_96435235_96435323_96435404_96435462_96435710_96435815_96436393_96436451_96436530_96436583_96437291_96437340_96437561_96437598_96437720_96437773_96439805
ENSMUSG00000036565.8_1	chr5	-	4568	13	FSM	ENSMUSG00000036565.8	ENSMUST00000197452.5	4576	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAACAGCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	140634780	140606340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140609287_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ENSMUSG00000036565.8_3	chr5	-	4645	14	FSM	ENSMUSG00000036565.8	ENSMUST00000042661.8	4658	14	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAAACAGCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140634786	140606345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140609287_140612205_140612282_140612876_140613051_140615136_140615274_140615469_140615563_140617247_140617341_140617942_140617999_140619019_140619096_140619318_140619392_140620513_140620610_140620936_140621158_140621268_140621381_140621651_140621822_140634459
ENSMUSG00000036568.8_0	chr17	-	6557	11	FSM	ENSMUSG00000036568.8	ENSMUST00000040624.7	6575	11	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACGTGTCACTGTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	47142325	47109049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47112756_47117477_47117581_47118321_47118417_47119274_47119421_47120493_47120553_47122849_47122951_47124858_47124965_47135375_47137050_47140837_47140907_47140990_47141040_47141876
ENSMUSG00000036572.17_0	chrX	-	2332	10	FSM	ENSMUSG00000036572.17	ENSMUST00000076265.13	2344	10	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCGTTTATTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	36373965	36355332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36356315_36359174_36359476_36360510_36360672_36363159_36363343_36363745_36363790_36365679_36365791_36368081_36368181_36372567_36372675_36372800_36372908_36373728
ENSMUSG00000036580.16_0	chr3	+	3764	9	FSM	ENSMUSG00000036580.16	ENSMUST00000044116.14	3770	9	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATGTATTCACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	55019534	55044743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_11	chr3	+	3564	8	FSM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55019552	55044732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55019639_55024404_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_19	chr3	+	3963	9	FSM	ENSMUSG00000036580.16	ENSMUST00000118118.8	3981	9	12	6	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55019598	55044732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_55019913_55024404_55025217_55029020_55029219_55032175_55032347_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036580.16_31	chr3	+	3477	7	ISM	ENSMUSG00000036580.16	ENSMUST00000107971.9	3567	8	4856	0	4598	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGGGCCTCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	55024405	55044732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_55025217_55029020_55029219_55033954_55034076_55034915_55035111_55035637_55035797_55035919_55036011_55042830
ENSMUSG00000036585.17_0	chr18	-	482	3	FSM	ENSMUSG00000036585.17	ENST00000407758.5	494	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTCTCTATTTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	38991772	38974965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38975175_38980099_38980199_38991598
ENSMUSG00000036591.17_0	chr2	-	6963	25	FSM	ENSMUSG00000036591.17	ENSMUST00000154230.9	6972	25	3	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTACTTGGTTTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	20972529	20852735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20888010_20888041_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972140
ENSMUSG00000036591.17_23	chr2	-	4185	20	FSM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGAGATTAAAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20888100	20855027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_20855197_20857848_20857881_20858768_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20888010
ENSMUSG00000036591.17_27	chr2	-	4096	19	ISM	ENSMUSG00000036591.17	ENST00000636789.1	4200	20	1445	7	1445	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTGAGATTAAAGAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	20886663	20855027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_20855197_20857848_20857881_20858768_20859044_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771
ENSMUSG00000036591.17_6	chr2	-	6838	24	FSM	ENSMUSG00000036591.17	ENST00000376410.7	6848	24	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTGCACTGTTGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	20972470	20852753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_20855197_20857848_20857881_20859745_20859852_20860164_20860207_20860391_20860518_20863711_20863802_20863877_20863952_20864528_20864608_20864691_20864848_20865114_20865258_20865781_20865919_20865996_20866062_20867890_20868176_20870075_20870202_20872612_20872650_20876202_20876306_20876420_20876580_20884771_20886663_20891916_20891972_20894685_20894765_20896895_20896989_20917087_20917113_20919442_20919623_20972158
ENSMUSG00000036596.7_0	chr5	-	2221	11	FSM	ENSMUSG00000036596.7	ENSMUST00000038676.7	2245	11	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACTGTGATGAAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	35683024	35659567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35660026_35660995_35661096_35664015_35664156_35665461_35665598_35668366_35668526_35669046_35669209_35669754_35669952_35672694_35672908_35674736_35675112_35676424_35676458_35682776
ENSMUSG00000036596.7_1	chr5	-	1974	10	FSM	ENSMUSG00000036596.7	ENST00000315782.6	1993	10	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTAGCACCCCTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	35682929	35659686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_35660026_35660995_35661096_35664015_35664156_35665461_35665598_35668366_35668526_35669046_35669209_35669754_35669952_35672694_35672908_35674736_35675112_35682776
ENSMUSG00000036599.11_0	chr5	+	2321	2	FSM	ENSMUSG00000036599.11	ENSMUST00000043050.9	2331	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATTTATATGTACG	NA	NA	NA	NA	NA	NA	NA	NA	140491314	140511479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140491452_140509295
ENSMUSG00000036606.18_0	chr15	-	6376	36	FSM	ENSMUSG00000036606.18	ENSMUST00000060808.10	6394	36	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGGTTGACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	89054879	89039757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771
ENSMUSG00000036606.18_6	chr15	-	6480	38	FSM	ENSMUSG00000036606.18	ENSMUST00000109331.9	6497	38	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGGTTGACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	89064980	89039757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89040589_89040700_89040776_89041195_89041272_89041388_89041454_89041594_89041743_89041837_89041999_89042103_89042259_89042438_89042524_89042627_89042729_89042829_89042987_89043161_89043309_89043429_89043497_89043663_89043846_89043975_89044206_89044363_89044465_89044570_89044711_89044809_89044987_89045087_89045316_89045426_89045560_89045877_89046049_89046188_89046326_89046453_89046563_89046649_89046799_89046889_89047051_89047125_89047208_89047480_89047574_89048214_89048317_89048415_89048525_89048622_89048738_89049449_89049604_89049905_89050033_89050108_89050210_89050568_89050698_89050786_89050970_89051143_89052231_89054771_89054821_89055269_89055320_89064867
ENSMUSG00000036613.9_0	chr12	+	4061	9	FSM	ENSMUSG00000036613.9	ENSMUST00000221877.2	4091	9	9	21	9	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAGAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	28801810	28919843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_28802004_28810068_28810153_28816770_28816904_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036613.9_4	chr12	+	1160	8	FSM	ENSMUSG00000036613.9	ENST00000398659.8	1175	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTAGTGGCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	28810073	28917083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_28810153_28816770_28816961_28878706_28878864_28897555_28897656_28909250_28909388_28912953_28913122_28914668_28914834_28916919
ENSMUSG00000036615.8_0	chr3	-	2156	3	FSM	ENSMUSG00000036615.8	ENSMUST00000044373.6	2162	3	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCGTCTGCTGTACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	54715207	54710536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_54711997_54712780_54712889_54714619
ENSMUSG00000036617.18_0	chr2	+	5502	19	FSM	ENSMUSG00000036617.18	ENST00000376452.7	5522	19	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAACTATTGCCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20524490	20815211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802690_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20812712_20812836_20813520
ENSMUSG00000036617.18_1	chr2	+	5510	19	NIC	ENSMUSG00000036617.18	novel	7197	21	NA	NA	7	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAACTATTGCCACAGGG	NA	NA	NA	NA	NA	NA	NA	NA	20524485	20815211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_20524739_20534769_20535054_20666708_20666908_20714215_20714415_20718165_20718260_20748269_20749103_20765025_20765076_20771255_20771423_20782836_20783013_20785752_20785884_20786608_20786757_20789854_20790312_20793238_20793423_20802687_20802843_20803426_20803595_20806352_20806473_20810395_20810474_20812712_20812836_20813520
ENSMUSG00000036620.15_0	chr11	+	2415	15	FSM	ENSMUSG00000036620.15	ENSMUST00000041725.14	2429	15	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAGTATGTGTCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	50116168	50125923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50116567_50121506_50121693_50121787_50121929_50122017_50122152_50122565_50122613_50122850_50122965_50123133_50123210_50123390_50123506_50123771_50123903_50124102_50124211_50124290_50124485_50124909_50124989_50125070_50125159_50125236_50125350_50125432
ENSMUSG00000036622.16_0	chr4	+	3947	29	FSM	ENSMUSG00000036622.16	ENSMUST00000037055.14	3956	29	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	140714191	140734640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140733989_140734160_140734251
ENSMUSG00000036622.16_2	chr4	+	3876	29	FSM	ENSMUSG00000036622.16	ENSMUST00000127833.3	3882	29	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTCGGCACTGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	140714188	140734640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140714388_140719442_140719538_140719648_140719832_140721106_140721166_140721258_140721374_140721622_140721703_140722636_140722715_140722868_140722939_140723612_140723748_140723834_140723902_140723978_140724111_140726438_140726595_140727653_140727765_140727853_140727901_140727995_140728185_140729194_140729402_140729767_140729858_140729934_140730095_140730209_140730331_140730461_140730587_140731196_140731358_140731492_140731598_140731678_140731759_140732312_140732466_140732576_140732674_140733353_140733578_140733662_140733815_140734063_140734160_140734251
ENSMUSG00000036632.10_0	chr3	+	1460	10	FSM	ENSMUSG00000036632.10	ENSMUST00000044567.4	1471	10	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAAGGTGTCCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	54642966	54657212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54643071_54646202_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036632.10_4	chr3	+	760	8	FSM	ENSMUSG00000036632.10	ENST00000679837.1	785	8	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACGGAAAGCGAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	54646217	54656745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54646375_54646682_54646730_54648799_54648869_54649567_54649661_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036632.10_5	chr3	+	815	8	FSM	ENSMUSG00000036632.10	ENST00000443765.6	828	8	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCTGGACTGCATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	54646214	54656773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54646375_54646682_54646730_54649588_54649661_54652018_54652133_54652527_54652588_54653886_54654039_54656028_54656115_54656649
ENSMUSG00000036634.16_0	chr7	-	2291	10	FSM	ENSMUSG00000036634.16	ENST00000392213.8	2300	10	0	9	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACAAATGCCAGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30612292	30598613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611383_30612248
ENSMUSG00000036634.16_1	chr7	-	2237	9	ISM	ENSMUSG00000036634.16	ENST00000392213.8	2300	10	920	9	920	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACAAATGCCAGTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	30611372	30598613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315
ENSMUSG00000036634.16_2	chr7	-	2205	8	ISM	ENSMUSG00000036634.16	ENST00000537831.2	2278	9	1057	12	1057	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATAAATGTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	30611235	30598629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825
ENSMUSG00000036634.16_23	chr7	-	429	3	ISM	ENSMUSG00000036634.16	ENST00000597035.5	482	4	915	4	915	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCCTTCCCCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	30611377	30608460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30608698_30611064_30611195_30611315
ENSMUSG00000036634.16_24	chr7	-	478	4	FSM	ENSMUSG00000036634.16	ENST00000597035.5	482	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCCTTCCCCAACACC	NA	NA	NA	NA	NA	NA	NA	NA	30612292	30608460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30608698_30611064_30611195_30611315_30611383_30612248
ENSMUSG00000036634.16_6	chr7	-	2272	10	ISM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	914	12	914	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATAAATGTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	30611378	30598629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315
ENSMUSG00000036634.16_7	chr7	-	2320	11	FSM	ENSMUSG00000036634.16	ENST00000361922.8	2332	11	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATAAATGTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	30612292	30598629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30599124_30599776_30599822_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611195_30611315_30611383_30612248
ENSMUSG00000036634.16_8	chr7	-	2266	9	FSM	ENSMUSG00000036634.16	ENST00000537831.2	2278	9	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATAAATGTCCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	30612292	30598629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30599124_30600062_30600163_30600487_30600585_30601073_30601362_30606330_30606592_30607789_30608048_30608400_30608698_30610825_30611246_30612241
ENSMUSG00000036636.11_0	chr17	+	4194	25	FSM	ENSMUSG00000036636.11	ENSMUST00000162862.3	4237	25	34	9	34	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGTCTCTTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	25352398	25381064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372534_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUSG00000036636.11_1	chr17	+	4066	25	FSM	ENSMUSG00000036636.11	ENSMUST00000040729.9	4071	25	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTATTTTTATTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	25352369	25381078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25352589_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUSG00000036636.11_10	chr17	+	3961	25	FSM	ENSMUSG00000036636.11	ENSMUST00000160961.8	3983	25	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTGTCTCTTCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	25355609	25381064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25355738_25363403_25363473_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUSG00000036636.11_3	chr17	+	2430	24	FSM	ENSMUSG00000036636.11	ENST00000262318.12	2445	24	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGCAGCAACAGGAGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	25352456	25379598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25352589_25364542_25364615_25364741_25364808_25365290_25365424_25365743_25365854_25366683_25366765_25368012_25368076_25368184_25368269_25369160_25369255_25369515_25369581_25370089_25370207_25370677_25370733_25371321_25371383_25371989_25372129_25372705_25372800_25374341_25374512_25375774_25375827_25376113_25376242_25376462_25376549_25376845_25376976_25378441_25378502_25378583_25378761_25379103_25379185_25379418
ENSMUSG00000036639.13_0	chr5	+	946	4	FSM	ENSMUSG00000036639.13	ENSMUST00000071881.10	952	4	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	140317618	140323890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140317711_140320209_140320375_140321067_140321214_140323347
ENSMUSG00000036639.13_1	chr5	+	952	5	FSM	ENSMUSG00000036639.13	ENSMUST00000050205.12	954	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	140317663	140323890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140317711_140318177_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUSG00000036639.13_2	chr5	+	904	4	FSM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	29	-327	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	140318178	140323890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140318229_140320209_140320375_140321067_140321214_140323347
ENSMUSG00000036639.13_3	chr5	+	854	3	ISM	ENSMUSG00000036639.13	ENSMUST00000110826.8	606	4	2060	-327	2031	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTGTGTGACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	140320209	140323890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_140320375_140321067_140321214_140323347
ENSMUSG00000036644.16_0	chr11	+	4381	21	FSM	ENSMUSG00000036644.16	ENSMUST00000093138.13	4407	21	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGAAAAAGCACACT	NA	NA	NA	NA	NA	NA	NA	NA	50022235	50062844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50058995_50059053_50059522_50059630_50061523
ENSMUSG00000036644.16_15	chr11	+	283	3	FSM	ENSMUSG00000036644.16	ENST00000630103.1	300	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGCAGAGCTAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	50022274	50035916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50022384_50026651_50026763_50035853
ENSMUSG00000036644.16_5	chr11	+	5197	22	FSM	ENSMUSG00000036644.16	ENSMUST00000101270.5	5213	22	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTACTTTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	50022230	50063604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50022384_50026651_50026763_50031209_50031329_50035853_50036083_50036929_50037189_50038847_50039056_50040528_50040742_50042145_50042308_50042748_50042900_50043450_50043666_50045912_50046031_50047571_50047858_50049243_50049374_50049488_50049588_50050469_50050539_50052281_50052523_50052872_50052939_50054651_50054724_50054988_50055040_50058995_50059053_50059522_50059630_50061523
ENSMUSG00000036646.14_0	chr2	+	3742	13	FSM	ENSMUSG00000036646.14	ENSMUST00000042390.5	3755	13	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGCTGTGTGCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	25222748	25242219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25222989_25223446_25223556_25224388_25224505_25228124_25228280_25231618_25231729_25233235_25233422_25234979_25235129_25235417_25235607_25238047_25238239_25238582_25238704_25239181_25239380_25239462_25239595_25240373
ENSMUSG00000036655.9_0	chr12	-	751	5	ISM	ENSMUSG00000036655.9	ENST00000382062.6	776	6	12	472	12	-9	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTGAGAGCCGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	28667550	28644664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_28645048_28645242_28645339_28645958_28646013_28662861_28662934_28667404
ENSMUSG00000036661.15_0	chr15	+	3223	20	FSM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGAAGGTGGAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	73395336	73442785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_73395404_73395987_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ENSMUSG00000036661.15_21	chr15	+	3153	19	ISM	ENSMUSG00000036661.15	ENST00000424248.2	3234	20	657	8	657	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGGAAGGTGGAGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	73395990	73442785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_73396122_73399764_73399877_73404667_73404788_73405109_73405329_73409138_73409261_73414568_73414666_73416206_73416311_73416794_73416995_73418969_73419492_73426905_73427166_73428196_73428368_73429430_73429561_73434173_73434282_73436345_73436486_73436864_73437023_73438881_73439016_73440270_73440375_73440456_73440595_73442602
ENSMUSG00000036667.15_0	chr6	-	5236	9	FSM	ENSMUSG00000036667.15	ENSMUST00000045054.11	5257	9	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACATCCTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	42687013	42644947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42686892
ENSMUSG00000036667.15_1	chr6	-	3316	9	FSM	ENSMUSG00000036667.15	ENSMUST00000121083.8	3342	9	14	12	-14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGTAAAAAATTAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	42670007	42646887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42647258_42650286_42650573_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359_42656355_42663258_42663893_42669866
ENSMUSG00000036667.15_3	chr6	-	2221	7	FSM	ENSMUSG00000036667.15	ENST00000414990.3	2242	7	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATGTAAGGAGTGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	42656343	42650318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42650573_42651446_42651540_42651975_42652314_42653724_42653965_42654263_42654478_42655003_42655102_42655359
ENSMUSG00000036672.6_0	chr8	-	1799	13	FSM	ENSMUSG00000036672.6	ENSMUST00000040776.6	1814	13	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTAGAAGAAAGTTAGCG	NA	NA	NA	NA	NA	NA	NA	NA	106578676	106571313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106571628_106571705_106571811_106571891_106572069_106572947_106573024_106573279_106573433_106573615_106573811_106575382_106575532_106575644_106575688_106575818_106575956_106576056_106576154_106576257_106576346_106576464_106576556_106578502
ENSMUSG00000036676.15_0	chr10	-	5974	14	FSM	ENSMUSG00000036676.15	ENSMUST00000058154.15	5993	14	9	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTCAGCCTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	100323203	100279773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_100283606_100284685_100284913_100286100_100286271_100287243_100287348_100292909_100293022_100294776_100294898_100296821_100296971_100301882_100302136_100307190_100307364_100307776_100307893_100310236_100310337_100312418_100312638_100313666_100313885_100323023
ENSMUSG00000036678.9_0	chr15	-	1795	16	FSM	ENSMUSG00000036678.9	ENSMUST00000041208.9	1811	16	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1652	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACCAGGATGTAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	102259183	102246691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102246941_102247075_102247161_102247251_102247334_102247620_102247689_102247759_102247854_102247965_102248057_102248198_102248260_102248378_102248504_102248765_102248887_102252523_102252668_102254011_102254111_102254921_102254969_102255112_102255205_102255470_102255527_102258387_102258516_102258930
ENSMUSG00000036686.17_0	chr8	-	3256	28	FSM	ENSMUSG00000036686.17	ENSMUST00000117424.9	3262	28	5	1	5	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTTTTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84874489	84859457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865456_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ENSMUSG00000036686.17_3	chr8	-	3465	29	FSM	ENSMUSG00000036686.17	ENSMUST00000040383.9	3471	29	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTTGTCTTTTTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	84874560	84859457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84859887_84859960_84860009_84860092_84860170_84860392_84860520_84860605_84860670_84861104_84861167_84861250_84861389_84861525_84861617_84861690_84861791_84862233_84862286_84862386_84862446_84862515_84862590_84863367_84863485_84863558_84863618_84863698_84863822_84865089_84865263_84865346_84865459_84865918_84866053_84866869_84866943_84867012_84867144_84867234_84867307_84867391_84867465_84867709_84867829_84869915_84870139_84870236_84870372_84870586_84870653_84870737_84870851_84872942_84873079_84874275
ENSMUSG00000036687.14_0	chr5	-	2016	9	FSM	ENSMUSG00000036687.14	ENSMUST00000044002.10	2039	9	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTTTGTTGGGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	139800018	139790709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139791497_139791936_139792132_139792659_139792830_139793374_139793467_139793548_139793625_139793711_139793803_139794111_139794278_139798719_139798948_139799807
ENSMUSG00000036693.13_0	chr5	-	2687	18	FSM	ENSMUSG00000036693.13	ENSMUST00000041364.13	2702	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTAGCAAGGCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34817483	34795885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34795996_34796234_34796391_34796528_34796648_34798213_34798362_34798666_34798827_34801269_34801424_34802056_34802159_34804505_34804642_34805735_34805822_34806680_34806812_34807669_34807965_34809093_34809226_34809639_34809763_34811226_34811362_34811779_34811914_34814084_34814227_34815218_34815354_34817194
ENSMUSG00000036698.12_1	chr15	-	13785	19	FSM	ENSMUSG00000036698.12	ENSMUST00000044113.12	13800	19	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCGAAGGTGTCCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	73056770	72967693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_72978866_72979013_72979214_72980220_72980323_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ENSMUSG00000036698.12_8	chr15	-	3010	18	FSM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGCGCCCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	73056668	72978264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_72978866_72979013_72979214_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218_73018415_73056609
ENSMUSG00000036698.12_9	chr15	-	2948	17	ISM	ENSMUSG00000036698.12	ENST00000519980.5	3014	18	38257	4	38257	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGCGCCCTGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	73018411	72978264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_72978866_72979013_72979214_72983535_72983671_72985556_72985752_72988151_72988243_72991185_72991346_72992912_72993098_72995171_72995306_72995725_72995849_72995978_72996099_72997012_72997161_72998295_72998384_72998802_72998938_73000172_73000310_73002709_73002892_73009841_73009963_73018218
ENSMUSG00000036707.17_0	chr1	+	3809	9	FSM	ENSMUSG00000036707.17	ENST00000258418.10	3821	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCTTGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	85721153	85779289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85721547_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_1	chr1	+	3797	9	FSM	ENSMUSG00000036707.17	ENSMUST00000113360.8	3805	9	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGTCTTGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	85721161	85779289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85721543_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036707.17_2	chr1	+	1200	9	FSM	ENSMUSG00000036707.17	ENST00000410084.7	1219	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCCTAGTGTCTACTC	NA	NA	NA	NA	NA	NA	NA	NA	85721820	85776931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_85721963_85746077_85746235_85763043_85763209_85765006_85765126_85769918_85770088_85772313_85772374_85775130_85775197_85775997_85776142_85776753
ENSMUSG00000036712.16_0	chr8	+	7993	17	FSM	ENSMUSG00000036712.16	ENSMUST00000043526.15	8022	17	29	0	-3	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCCTTGATTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	89423684	89478573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445916_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_1	chr8	+	3462	17	FSM	ENSMUSG00000036712.16	ENST00000569418.5	3469	17	3	4	3	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAGGGATATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89423659	89474005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89423728_89431832_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_10	chr8	+	4466	17	FSM	ENSMUSG00000036712.16	ENSMUST00000209559.2	4476	17	0	10	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTCAAAAGAGTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	89423702	89475073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89423728_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_15	chr8	+	4572	17	ISM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	5261	10	2	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTCAAAAGAGTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	89428935	89475073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_18	chr8	+	3377	16	FSM	ENSMUSG00000036712.16	ENSMUST00000109626.4	7945	16	0	4568	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACCAGGGATATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89431849	89474005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_20	chr8	+	7943	16	ISM	ENSMUSG00000036712.16	ENSMUST00000043526.15	8022	17	8198	7	4	-7	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTCTCTCTCCTTGATT	NA	NA	NA	NA	NA	NA	NA	NA	89431853	89478566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_89432508_89433716_89434020_89436518_89436625_89445916_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036712.16_8	chr8	+	4625	18	FSM	ENSMUSG00000036712.16	ENSMUST00000211554.2	4638	18	3	10	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTCAAAAGAGTCTATAA	NA	NA	NA	NA	NA	NA	NA	NA	89423677	89475073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_89423728_89428932_89429067_89431853_89432508_89433716_89434020_89436518_89436625_89445925_89446025_89449726_89449841_89456086_89456467_89457283_89457450_89458302_89458445_89459613_89459737_89461510_89461603_89462458_89462526_89467918_89468052_89468913_89469023_89471455_89471575_89471836_89472054_89473456
ENSMUSG00000036718.18_0	chr5	-	3325	17	FSM	ENSMUSG00000036718.18	ENSMUST00000044642.14	3346	17	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCCCACAGTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139722077	139692457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139692665_139692816_139692864_139694640_139694756_139695270_139695345_139695445_139695537_139695957_139696082_139696156_139696222_139696337_139696488_139697308_139697467_139698041_139698136_139698895_139699153_139701460_139702601_139703193_139703310_139703977_139704169_139704998_139705141_139707702_139707752_139721772
ENSMUSG00000036721.15_0	chr13	+	4398	4	FSM	ENSMUSG00000036721.15	ENSMUST00000225545.2	4405	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTAGTTTCTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	21546989	21556452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21547043_21547749_21548222_21550784_21550927_21552721
ENSMUSG00000036721.15_1	chr13	+	2262	5	FSM	ENSMUSG00000036721.15	ENSMUST00000053293.14	2270	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATACTGTCCTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21547009	21554001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21547346_21547508_21547541_21547749_21548222_21550784_21550927_21552721
ENSMUSG00000036721.15_2	chr13	+	4346	3	FSM	ENSMUSG00000036721.15	ENSMUST00000099720.3	2182	3	294	-2458	294	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCTAGTTTCTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	21547748	21556452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21548222_21550784_21550927_21552721
ENSMUSG00000036733.17_0	chr7	-	1508	9	FSM	ENSMUSG00000036733.17	ENSMUST00000108141.2	1526	9	15	3	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCTGACTGGACTTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	30349554	30340426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000036733.17_1	chr7	-	1184	8	FSM	ENSMUSG00000036733.17	ENST00000589559.5	1195	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACAGTTGTCCACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	30349484	30340485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30343923_30344042_30344250_30344584_30345091_30345247_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000036733.17_2	chr7	-	1304	8	FSM	ENSMUSG00000036733.17	ENST00000592202.5	1315	8	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAACAGTTGTCCACTCGC	NA	NA	NA	NA	NA	NA	NA	NA	30349484	30340485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345247_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000036737.13_0	chr9	-	4625	18	FSM	ENSMUSG00000036737.13	ENSMUST00000040853.11	4647	18	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGATATATAAATGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	119151484	119067510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119070283_119070776_119070842_119071785_119071855_119073721_119073775_119074607_119074673_119076047_119076195_119080254_119080291_119083828_119083952_119088267_119088334_119089115_119089165_119093815_119093950_119096208_119096311_119097745_119097856_119101994_119102051_119113611_119113754_119123480_119123590_119133870_119133984_119151070
ENSMUSG00000036745.16_0	chr3	+	6056	21	FSM	ENSMUSG00000036745.16	ENSMUST00000170055.8	6075	21	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTATTCAAAAATACCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	146558133	146688498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146558345_146599756_146599956_146600118_146600251_146602360_146602483_146603501_146603570_146607078_146607238_146609788_146610006_146615260_146615426_146618984_146619144_146621449_146621545_146635809_146635958_146636148_146636223_146637232_146637369_146640282_146640370_146645730_146645933_146649760_146649979_146650848_146650984_146653332_146653414_146667358_146667520_146673750_146673925_146685385
ENSMUSG00000036745.16_1	chr3	+	7379	22	FSM	ENSMUSG00000036745.16	ENSMUST00000037942.11	7394	22	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACACGAAACCTATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	146558125	146689753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146558345_146599756_146599956_146600118_146600251_146602360_146602483_146603501_146603570_146607078_146607238_146609788_146610006_146615260_146615426_146618984_146619144_146621449_146621545_146635809_146635958_146636148_146636223_146637232_146637369_146640282_146640370_146645730_146645933_146647573_146647649_146649760_146649964_146650848_146650984_146653332_146653414_146667358_146667520_146673750_146673925_146685385
ENSMUSG00000036748.17_0	chr19	-	1827	9	FSM	ENSMUSG00000036748.17	ENSMUST00000051234.9	1833	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCTCCCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46327093	46318250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_1	chr19	-	1737	8	ISM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	5923	0	5911	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCTCCCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46321136	46318250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056
ENSMUSG00000036748.17_17	chr19	-	1039	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235977.2	1050	9	1	10	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46327076	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320080_46320195_46320258_46320351_46320496_46321056_46321141_46327007
ENSMUSG00000036748.17_19	chr19	-	1158	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236061.2	1164	10	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46327063	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326851_46327007
ENSMUSG00000036748.17_2	chr19	-	1790	9	FSM	ENSMUSG00000036748.17	ENSMUST00000235485.2	1790	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCTCCCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46327059	46318250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUSG00000036748.17_21	chr19	-	1161	10	FSM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46327047	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326870_46327007
ENSMUSG00000036748.17_24	chr19	-	995	9	FSM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46327056	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056_46321138_46327007
ENSMUSG00000036748.17_26	chr19	-	935	8	ISM	ENSMUSG00000036748.17	ENSMUST00000236980.2	999	9	5930	4	5921	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46321126	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320059_46320195_46320258_46320351_46320496_46321056
ENSMUSG00000036748.17_5	chr19	-	1936	10	FSM	ENSMUSG00000036748.17	ENSMUST00000167861.8	1941	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGGCTCCCAAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	46327094	46318250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751_46326860_46327007
ENSMUSG00000036748.17_6	chr19	-	1105	9	ISM	ENSMUSG00000036748.17	ENSMUST00000236046.2	1167	10	194	6	194	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGGTATATGCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	46326853	46318988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_46319274_46319358_46319420_46319490_46319553_46319728_46319906_46319984_46320113_46320195_46320258_46320351_46320496_46321056_46321141_46326751
ENSMUSG00000036751.8_0	chr7	-	606	4	FSM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	4258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTATTATTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30325567	30316288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30316588_30322839_30322941_30323924_30324039_30325475
ENSMUSG00000036751.8_1	chr7	-	516	3	ISM	ENSMUSG00000036751.8	ENSMUST00000075738.6	618	4	1536	3	1499	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTATTATTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30324040	30316288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30316588_30322839_30322941_30323924
ENSMUSG00000036752.5_0	chr2	-	1588	4	FSM	ENSMUSG00000036752.5	ENSMUST00000043584.5	1598	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGCCTGTCCAATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25114704	25112171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25113381_25113945_25114057_25114135_25114245_25114545
ENSMUSG00000036752.5_11	chr2	-	716	2	ISM	ENSMUSG00000036752.5	ENST00000562809.1	792	3	555	10	555	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATGATGGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25114050	25112769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25113381_25113945
ENSMUSG00000036752.5_12	chr2	-	780	3	FSM	ENSMUSG00000036752.5	ENST00000562809.1	792	3	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAACATGATGGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	25114603	25112769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25113381_25113945_25114057_25114545
ENSMUSG00000036752.5_6	chr2	-	1273	3	FSM	ENSMUSG00000036752.5	ENST00000568866.5	1274	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCACAGCCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	25114605	25112276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25113381_25114135_25114245_25114545
ENSMUSG00000036752.5_7	chr2	-	1207	2	ISM	ENSMUSG00000036752.5	ENST00000568866.5	1274	3	366	2	366	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATTCACAGCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25114239	25112277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_25113381_25114135
ENSMUSG00000036764.13_0	chr10	+	3002	5	FSM	ENSMUSG00000036764.13	ENSMUST00000043317.7	3025	5	7	16	7	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAATCCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63222348	63246339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_63222555_63231563_63231643_63233017_63233158_63242780_63242986_63243967
ENSMUSG00000036766.13_0	chr1	-	3627	13	FSM	ENSMUSG00000036766.13	ENSMUST00000049126.13	3632	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACTCACTTGTCTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	84673942	84347564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_84348597_84361505_84361753_84373335_84373468_84383659_84383774_84396369_84396493_84423115_84423341_84454065_84454180_84472451_84472606_84512572_84512719_84558376_84558544_84560724_84560820_84563033_84563343_84673173
ENSMUSG00000036768.7_0	chr9	+	4841	35	FSM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATGTGTATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	122780119	122847790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122780218_122788181_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ENSMUSG00000036768.7_4	chr9	+	4739	34	ISM	ENSMUSG00000036768.7	ENSMUST00000040717.7	4858	35	8071	12	8071	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAACAATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	122788181	122847786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_122788225_122788871_122789056_122792544_122792622_122795013_122795052_122800753_122800852_122804713_122804894_122806904_122807115_122808534_122808661_122808804_122808928_122813864_122813989_122815209_122815287_122815506_122815717_122816910_122817089_122820150_122820293_122820925_122821068_122822907_122823106_122824780_122824889_122825355_122825462_122826846_122827013_122828239_122828391_122828579_122828666_122830109_122830180_122831099_122831187_122832634_122832740_122833635_122833759_122836378_122836526_122838381_122838484_122838824_122838990_122840592_122840703_122843004_122843078_122843533_122843572_122846309_122846476_122846651_122846784_122847132
ENSMUSG00000036769.15_0	chrX	+	3859	18	FSM	ENSMUSG00000036769.15	ENST00000371822.9	3873	18	14	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTGAAATATTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	23559286	23672185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_23559779_23598556_23598591_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666972_23667075_23667278_23667395_23668553_23668682_23670007_23670143_23671127
ENSMUSG00000036769.15_22	chrX	+	4014	20	FSM	ENSMUSG00000036769.15	ENST00000371825.7	4032	20	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTAAAGTTGGTCATCA	NA	NA	NA	NA	NA	NA	NA	NA	23559345	23672156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_23559779_23598556_23598591_23616144_23616220_23622678_23623325_23624333_23624465_23625421_23625518_23627642_23627780_23628515_23628600_23636128_23636236_23644862_23645015_23647041_23647181_23649526_23649592_23654290_23654405_23662222_23662346_23666608_23666801_23666972_23667075_23667278_23667395_23668577_23668682_23670007_23670143_23671127
ENSMUSG00000036775.14_0	chr17	-	2037	7	FSM	ENSMUSG00000036775.14	ENSMUST00000237875.2	2064	7	20	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGAAATAGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	26309244	26300191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26303110_26306297_26306434_26307902_26307972_26309070
ENSMUSG00000036775.14_1	chr17	-	2210	9	FSM	ENSMUSG00000036775.14	ENSMUST00000040907.8	2224	9	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGGAAATAGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	26309304	26300191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26301236_26301849_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUSG00000036775.14_4	chr17	-	2000	8	FSM	ENSMUSG00000036775.14	ENSMUST00000236268.2	2038	8	24	14	24	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAGAAAAAAAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	26309225	26300217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26301236_26301849_26302068_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUSG00000036775.14_5	chr17	-	1967	9	FSM	ENSMUSG00000036775.14	ENSMUST00000237265.2	1993	9	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACAGAAAAAAAATTGACT	NA	NA	NA	NA	NA	NA	NA	NA	26309182	26300217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26301236_26301944_26302068_26302549_26302655_26302818_26302913_26302984_26303110_26306297_26306434_26306995_26307048_26307902_26307972_26308937
ENSMUSG00000036777.9_0	chr9	-	4583	24	FSM	ENSMUSG00000036777.9	ENSMUST00000040912.9	4605	24	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGTCAAAAGCATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	22300474	22243319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22244470_22245297_22245471_22249227_22249336_22250297_22250385_22262215_22262329_22263171_22263194_22263509_22263549_22264078_22264136_22264625_22264675_22267347_22267475_22269415_22269599_22269908_22270045_22271705_22271854_22272117_22272264_22273981_22274218_22275285_22275397_22279681_22279809_22283451_22283560_22284436_22284628_22286222_22286437_22287432_22287819_22291345_22291652_22293466_22293624_22300265
ENSMUSG00000036779.13_1	chr8	+	4612	13	FSM	ENSMUSG00000036779.13	ENSMUST00000119033.8	4624	13	6	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACTTTTAGTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88925846	88986344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_88925942_88926558_88927131_88969868_88969993_88972225_88972273_88972992_88973114_88974136_88974245_88975732_88975862_88977267_88977482_88978582_88978710_88978809_88978914_88979013_88979202_88981736_88981902_88983726
ENSMUSG00000036781.14_0	chr9	+	484	4	FSM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	7	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGACAAGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66853374	66856786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66856610
ENSMUSG00000036781.14_1	chr9	+	557	5	FSM	ENSMUSG00000036781.14	ENSMUST00000127896.8	575	5	8	10	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGACAAGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66853380	66856786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_66853463_66854112_66854222_66854868_66854980_66855920_66856000_66856610
ENSMUSG00000036781.14_2	chr9	+	396	3	ISM	ENSMUSG00000036781.14	ENSMUST00000040917.14	499	4	745	8	740	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATGGACAAGTTCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	66854112	66856786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_66854222_66854868_66854980_66856610
ENSMUSG00000036782.14_0	chrX	-	3243	9	FSM	ENSMUSG00000036782.14	ENSMUST00000115313.8	3251	9	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGTTACTCCTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23231313	23085509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23181368_23181441_23227732_23227824_23231194
ENSMUSG00000036782.14_2	chrX	-	3719	8	FSM	ENSMUSG00000036782.14	ENST00000371876.5	3738	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCATTCTGCTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	23130249	23085530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127799_23129385_23129677_23129747
ENSMUSG00000036782.14_7	chrX	-	2319	8	FSM	ENSMUSG00000036782.14	ENST00000469946.5	2329	8	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTATAAGCCAAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	23162328	23086294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453_23160520_23162251
ENSMUSG00000036782.14_8	chrX	-	2241	7	ISM	ENSMUSG00000036782.14	ENST00000469946.5	2329	8	1814	6	1814	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTATAAGCCAAGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	23160518	23086294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_23087092_23094812_23094927_23101464_23102261_23113599_23113797_23114350_23114484_23127673_23127813_23160453
ENSMUSG00000036810.17_0	chr8	+	1721	6	FSM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATAACTAGTGGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	88845401	88861729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_88845498_88846407_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUSG00000036810.17_5	chr8	+	1624	5	ISM	ENSMUSG00000036810.17	ENSMUST00000095214.10	1731	6	1009	8	971	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATATAACTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	88846405	88861726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_88846480_88851709_88851784_88856322_88856433_88856974_88857030_88860415
ENSMUSG00000036817.15_0	chr5	+	4133	23	FSM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	139186392	139235595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_11	chr5	+	3948	22	FSM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	139186414	139235543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_15	chr5	+	4069	22	ISM	ENSMUSG00000036817.15	ENSMUST00000058716.14	4134	23	14523	0	3133	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTGTCTTATCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	139200914	139235595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139216881_139216993_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_17	chr5	+	3903	21	ISM	ENSMUSG00000036817.15	ENSMUST00000110884.9	3955	22	14503	7	3136	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	139200917	139235543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139215507_139215700_139216527_139216594_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036817.15_9	chr5	+	3707	20	FSM	ENSMUSG00000036817.15	ENSMUST00000110883.9	3714	20	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTGCATGTGCGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	139186397	139235543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139186455_139200912_139201010_139209348_139209541_139211017_139211203_139212332_139212360_139212460_139212641_139219225_139219325_139219655_139219750_139220269_139220329_139220441_139220588_139221246_139221487_139222403_139222491_139223633_139223678_139224582_139224695_139226987_139227243_139227697_139227783_139231083_139231200_139232447_139232616_139233824_139233918_139234172
ENSMUSG00000036819.15_0	chr11	+	4346	6	FSM	ENSMUSG00000036819.15	ENSMUST00000108777.10	4351	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACCTGTAACCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59340870	59349294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344617_59344886_59345758_59345906_59346132
ENSMUSG00000036819.15_1	chr11	+	4301	6	FSM	ENSMUSG00000036819.15	ENSMUST00000045279.13	4315	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACCTGTAACCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	59340879	59349294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59341339_59341500_59341667_59344336_59344472_59344653_59344886_59345758_59345906_59346132
ENSMUSG00000036820.13_0	chr17	-	1479	11	FSM	ENSMUSG00000036820.13	ENSMUST00000040735.12	1496	11	11	6	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGCCTTGTCTGCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	24382729	24374812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24375060_24375544_24375647_24376501_24376571_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUSG00000036820.13_14	chr17	-	1156	9	FSM	ENSMUSG00000036820.13	ENST00000648227.1	1167	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGTCTAAAACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	24382300	24374886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24375060_24375544_24375647_24376713_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169
ENSMUSG00000036820.13_15	chr17	-	1457	10	FSM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	6	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGTCTAAAACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	24382638	24374886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169_24382307_24382555
ENSMUSG00000036820.13_16	chr17	-	1377	9	ISM	ENSMUSG00000036820.13	ENST00000302956.8	1463	10	335	0	2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTATGTCTAAAACAGAACC	NA	NA	NA	NA	NA	NA	NA	NA	24382309	24374886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24375060_24375544_24375647_24376501_24376822_24376891_24377037_24377117_24377207_24377283_24377497_24377613_24377669_24381949_24382090_24382169
ENSMUSG00000036822.7_0	chr4	-	3826	3	FSM	ENSMUSG00000036822.7	ENSMUST00000042575.7	3856	3	15	15	15	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	564	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCAGACAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	40269835	40259615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40263082_40268303_40268502_40269673
ENSMUSG00000036825.13_11	chr3	+	3119	12	ISM	ENSMUSG00000036825.13	ENST00000437941.6	3147	13	9	1287	8	10	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTCACTGCGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	146124036	146145909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133920_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036825.13_22	chr3	+	1609	11	FSM	ENSMUSG00000036825.13	ENST00000605755.5	1625	11	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGGTACTTGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	146124040	146143089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133920_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930
ENSMUSG00000036825.13_4	chr3	+	3197	13	ISM	ENSMUSG00000036825.13	ENST00000342203.8	3218	14	2	1287	2	10	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTCACTGCGTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	146123474	146145909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_146123546_146124029_146124200_146124889_146125103_146128650_146128762_146132077_146132214_146133579_146133656_146133741_146133920_146136683_146136835_146138235_146138373_146138727_146138902_146142297_146142413_146142930_146143097_146144410
ENSMUSG00000036832.6_0	chr3	+	2453	3	FSM	ENSMUSG00000036832.6	ENSMUST00000039164.4	2464	3	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTGTAGAAGAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	145926723	145991936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145926903_145946302_145947060_145990419
ENSMUSG00000036833.17_0	chr2	+	4548	35	FSM	ENSMUSG00000036833.17	ENSMUST00000045295.14	4574	35	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGATTGTGTGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	24866062	24944061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24866326_24870045_24870121_24870214_24870303_24870724_24870805_24871788_24871881_24872043_24872185_24873501_24873662_24877130_24877212_24885289_24885419_24886168_24886250_24887238_24887363_24888633_24888772_24892626_24892728_24892900_24893045_24900725_24900804_24901517_24901724_24905161_24905294_24906518_24906643_24909415_24909530_24911953_24912024_24919518_24919669_24928848_24928913_24929614_24929784_24930957_24931141_24932100_24932220_24937619_24937777_24940010_24940128_24940269_24940340_24940866_24940984_24941612_24941762_24942043_24942197_24942319_24942431_24942564_24942650_24943406_24943511_24943682
ENSMUSG00000036835.8_0	chr7	-	650	3	FSM	ENSMUSG00000036835.8	ENSMUST00000207747.2	669	3	8	11	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAATATTGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30262504	30261298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30261560_30261748_30261854_30262220
ENSMUSG00000036835.8_1	chr7	-	693	4	FSM	ENSMUSG00000036835.8	ENSMUST00000043898.8	708	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAAATATTGAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30262660	30261298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30261560_30261748_30261854_30262220_30262364_30262476
ENSMUSG00000036835.8_2	chr7	-	563	2	FSM	ENSMUSG00000036835.8	ENST00000591949.1	585	2	13	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTTCATAAGCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30262351	30261421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30261854_30262220
ENSMUSG00000036840.6_0	chr8	-	2080	2	FSM	ENSMUSG00000036840.6	ENST00000356721.3	2102	2	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAAAAAAATTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	87455169	87450572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_87452485_87455001
ENSMUSG00000036840.6_1	chr8	-	1957	2	FSM	ENSMUSG00000036840.6	ENSMUST00000045296.6	1968	2	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGCAGTTTGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87472552	87450635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_87452485_87472444
ENSMUSG00000036845.13_0	chr7	-	976	9	FSM	ENSMUSG00000036845.13	ENSMUST00000043975.11	998	9	17	5	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGACAAATCTCAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	30259054	30254870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257384_30258866
ENSMUSG00000036845.13_5	chr7	-	1294	9	FSM	ENSMUSG00000036845.13	ENSMUST00000108164.8	1312	9	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAGGCAGTTGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	30259255	30254879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30255034_30255112_30255187_30255273_30255415_30256282_30256450_30256524_30256611_30256689_30256720_30257050_30257102_30257307_30257510_30258866
ENSMUSG00000036850.5_0	chr2	-	762	2	FSM	ENSMUSG00000036850.5	ENSMUST00000045604.4	776	2	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTATGTGTTTTGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	24865099	24864131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24864694_24864899
ENSMUSG00000036854.15_0	chr7	+	1348	3	FSM	ENSMUSG00000036854.15	ENSMUST00000044048.8	1363	3	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCCTTATGTCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	30252704	30254865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30252958_30253686_30253810_30253893
ENSMUSG00000036856.5_0	chr4	+	4178	5	FSM	ENSMUSG00000036856.5	ENSMUST00000045747.5	4194	5	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	137004813	137027035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137005068_137016424_137016661_137022751_137022884_137022970_137023114_137023622
ENSMUSG00000036860.15_0	chr11	+	723	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108786.8	757	4	29	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTGGAACTCATCATTT	NA	NA	NA	NA	NA	NA	NA	NA	59093340	59096748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59093486_59095000_59095082_59095360_59095584_59096474
ENSMUSG00000036860.15_1	chr11	+	701	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108787.9	718	4	8	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATAACCACCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	59093322	59096705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59093486_59094997_59095082_59095360_59095584_59096474
ENSMUSG00000036860.15_2	chr11	+	924	4	FSM	ENSMUSG00000036860.15	ENSMUST00000045697.12	940	4	13	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACACAGCTTCAGACC	NA	NA	NA	NA	NA	NA	NA	NA	59093330	59096957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59093486_59094997_59095082_59095381_59095584_59096474
ENSMUSG00000036860.15_3	chr11	+	782	4	FSM	ENSMUSG00000036860.15	ENSMUST00000108785.2	792	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGACTTTTGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	59093337	59096825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59093486_59095000_59095082_59095381_59095584_59096474
ENSMUSG00000036867.8_0	chr9	-	2962	4	FSM	ENSMUSG00000036867.8	ENSMUST00000041029.6	2971	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGTTTTTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	63929338	63860363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63861339_63914812_63914891_63919496_63919554_63927486
ENSMUSG00000036873.14_0	chr3	+	1527	3	FSM	ENSMUSG00000036873.14	ENSMUST00000039571.14	1547	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTAATTTAACTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	145643779	145650575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145644084_145644652_145644852_145649551
ENSMUSG00000036875.16_0	chr10	+	4114	21	FSM	ENSMUSG00000036875.16	ENSMUST00000131422.8	4122	21	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTCACTGAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	62782806	62809958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62782949_62784961_62785145_62786513_62786698_62789962_62790109_62791092_62791225_62792708_62792929_62793831_62793950_62794674_62794838_62794953_62795149_62795990_62796222_62797199_62797317_62797392_62797503_62798174_62798285_62799583_62799809_62800678_62800873_62802195_62802286_62802378_62802584_62803431_62803522_62805554_62805738_62807622_62807770_62809029
ENSMUSG00000036879.16_29	chr8	+	3749	29	ISM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	2477	10	2477	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAGGAATACAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86604737	86786703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036879.16_9	chr8	+	3834	30	FSM	ENSMUSG00000036879.16	ENST00000323584.10	3850	30	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	6499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATAGGAATACAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86602266	86786703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_86602353_86604738_86604878_86606339_86606440_86623058_86623167_86628505_86628587_86648755_86648872_86662036_86662101_86667469_86667566_86668820_86669019_86672680_86672739_86673763_86673842_86684124_86684284_86697531_86697627_86737645_86737702_86738198_86738293_86743487_86743572_86744020_86744126_86745097_86745181_86745664_86745756_86748013_86748076_86748171_86748335_86749366_86749449_86750909_86750968_86751826_86751918_86756110_86756314_86770338_86770474_86776318_86776449_86783076_86783185_86785173_86785315_86785933
ENSMUSG00000036880.11_0	chr18	+	1506	10	FSM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCAGCTAACCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74912270	74939272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_74912337_74920189_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036880.11_18	chr18	+	1437	9	ISM	ENSMUSG00000036880.11	ENSMUST00000041053.11	1516	10	7925	7	7925	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCAGCTAACCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	74920192	74939272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_74920357_74925421_74925551_74926357_74926475_74928201_74928350_74931382_74931559_74932115_74932246_74934367_74934439_74937071_74937227_74938925
ENSMUSG00000036882.8_0	chr7	-	4129	21	FSM	ENSMUSG00000036882.8	ENST00000378944.9	4157	21	14	14	-2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAGGAATAAAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	30234487	30221678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30222793_30222876_30223272_30223368_30224014_30225379_30225455_30225538_30225685_30225771_30225926_30226566_30226713_30227704_30227813_30227894_30227978_30228078_30228224_30229140_30229244_30229319_30229473_30229560_30229621_30229700_30229768_30229849_30229928_30230010_30230134_30230948_30231042_30231503_30231642_30231744_30231826_30232184_30232270_30234350
ENSMUSG00000036885.15_0	chr3	+	5629	14	FSM	ENSMUSG00000036885.15	ENSMUST00000079300.13	5638	14	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTACCTATAGCTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	62245764	62369633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_62247995_62248764_62248805_62252566_62252713_62285008_62285066_62288251_62288413_62326969_62327123_62330921_62331052_62334009_62334085_62336301_62336392_62339908_62340064_62355513_62355724_62365793_62365862_62367030_62367136_62367624
ENSMUSG00000036890.14_1	chr2	-	2229	8	FSM	ENSMUSG00000036890.14	ENST00000241391.9	2244	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATTAGCATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	44715554	44454439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44455547_44460430_44460523_44461224_44461296_44481892_44482003_44525013_44525329_44642058_44642233_44646279_44646448_44715362
ENSMUSG00000036890.14_2	chr2	-	2057	8	FSM	ENSMUSG00000036890.14	ENST00000409298.5	2074	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATTAGCATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	44715552	44454439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44455547_44460430_44460523_44461224_44461296_44465454_44465600_44481892_44482003_44642058_44642233_44646279_44646448_44715362
ENSMUSG00000036890.14_7	chr2	-	2117	7	FSM	ENSMUSG00000036890.14	ENST00000392867.7	2134	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATTAGCATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	44715552	44454439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_44455547_44460430_44460523_44461224_44461296_44525013_44525329_44642058_44642233_44646279_44646448_44715362
ENSMUSG00000036892.13_0	chr7	+	1363	10	FSM	ENSMUSG00000036892.13	ENST00000301175.7	1383	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTCCCGAGTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	30193159	30212446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30193283_30193356_30193558_30193636_30193776_30193862_30193950_30205645_30205727_30205801_30205958_30206035_30206203_30209191_30209303_30210562_30210649_30212234
ENSMUSG00000036893.18_0	chr2	-	5882	26	ISM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	32550	5	4639	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTCATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24777076	24679944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014
ENSMUSG00000036893.18_1	chr2	-	5948	27	FSM	ENSMUSG00000036893.18	ENSMUST00000147147.8	5953	27	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTTTGTTCATTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24809626	24679944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUSG00000036893.18_11	chr2	-	4541	26	FSM	ENSMUSG00000036893.18	ENSMUST00000046227.12	4554	26	0	13	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24809586	24681167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUSG00000036893.18_12	chr2	-	4490	25	ISM	ENSMUSG00000036893.18	ENSMUST00000114432.9	4539	26	32514	19	4643	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGTAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24777072	24681173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014
ENSMUSG00000036893.18_13	chr2	-	4622	26	ISM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	32537	5	4649	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGTAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24777066	24681173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014
ENSMUSG00000036893.18_14	chr2	-	4672	27	FSM	ENSMUSG00000036893.18	ENSMUST00000102938.10	4680	27	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAACTGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24809603	24681176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUSG00000036893.18_16	chr2	-	4431	24	ISM	ENSMUSG00000036893.18	ENSMUST00000114432.9	4539	26	34873	19	7002	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGTAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24774713	24681173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157
ENSMUSG00000036893.18_17	chr2	-	4520	26	FSM	ENSMUSG00000036893.18	ENSMUST00000114432.9	4539	26	0	19	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTGTAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	24809586	24681173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24730647_24730792_24737955_24738102_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753921_24767466_24767639_24774157_24774715_24777014_24777082_24809565
ENSMUSG00000036893.18_6	chr2	-	4893	26	FSM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	0	9	0	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAATCAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24781715	24680815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014_24777082_24781694
ENSMUSG00000036893.18_7	chr2	-	4858	25	ISM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	4648	9	4648	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAATCAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24777067	24680815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157_24774715_24777014
ENSMUSG00000036893.18_9	chr2	-	4807	24	ISM	ENSMUSG00000036893.18	ENSMUST00000114418.10	4902	26	6999	9	6999	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAAATCAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24774716	24680815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_24682143_24682292_24682469_24691518_24691598_24692032_24692120_24693025_24693142_24693954_24694033_24694771_24694917_24695085_24695254_24696225_24696381_24703538_24703644_24705742_24705845_24714956_24715080_24726407_24726515_24727587_24727671_24728712_24728881_24729541_24729769_24737955_24738102_24742676_24742815_24746617_24746739_24748184_24748263_24753234_24753424_24753783_24753942_24767466_24767639_24774157
ENSMUSG00000036894.4_0	chr3	+	6770	1	FSM	ENSMUSG00000036894.4	ENSMUST00000049064.4	6793	1	14	9	14	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	782	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAAATGGAGCCCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	61269072	61275842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_61269100_61275800
ENSMUSG00000036898.17_0	chr5	+	5294	5	FSM	ENSMUSG00000036898.17	ENSMUST00000085856.12	5312	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTATTCTAACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	138439739	138458948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453352_138454136
ENSMUSG00000036898.17_1	chr5	+	5304	5	NIC	ENSMUSG00000036898.17	novel	5312	5	NA	NA	0	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTTATTCTAACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	138439729	138458948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_138439892_138443013_138443141_138445776_138445870_138453241_138453356_138454140
ENSMUSG00000036908.18_0	chr19	+	2251	11	FSM	ENSMUSG00000036908.18	ENSMUST00000162708.7	2266	11	14	1	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGTAGGTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	3985199	3999339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3985353_3985761_3985904_3986268_3986423_3991519_3991682_3991884_3992018_3992348_3992443_3992693_3992819_3993528_3993712_3994022_3994297_3997006_3997126_3998627
ENSMUSG00000036913.16_0	chr8	+	3161	10	FSM	ENSMUSG00000036913.16	ENST00000366653.6	3179	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGCCTGGTGGCTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	125519785	125555818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125521645_125541808_125541905_125543742_125543866_125545436_125545548_125546926_125547087_125549860_125550007_125551456_125551596_125552673_125552978_125554837_125555001_125555758
ENSMUSG00000036916.14_0	chrX	-	4030	20	FSM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	3	12	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAACCTACAGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	47683326	47630513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549_47680639_47683240
ENSMUSG00000036916.14_1	chrX	-	3942	19	ISM	ENSMUSG00000036916.14	ENSMUST00000072292.12	4045	20	2695	10	4	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCTACAGATTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	47680634	47630511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_47632167_47632281_47632319_47632461_47632581_47636141_47636205_47637434_47637573_47638928_47639237_47642854_47642987_47647145_47647293_47647919_47648021_47648543_47648702_47652558_47652780_47655584_47655695_47655825_47655991_47657997_47658104_47661158_47661293_47661622_47661689_47667256_47667407_47677579_47677627_47680549
ENSMUSG00000036918.17_3	chr17	+	4588	20	FSM	ENSMUSG00000036918.17	ENSMUST00000041110.12	4614	20	17	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGTCTGAAGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	87590330	87689188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87590839_87597616_87597781_87600238_87600408_87614356_87614488_87616156_87616273_87628830_87628910_87629865_87630024_87630551_87630616_87636750_87636889_87637452_87637537_87641694_87641800_87647318_87647437_87648315_87648374_87649494_87649568_87653968_87654130_87666541_87666659_87669276_87669372_87670883_87671019_87677886_87678090_87687276
ENSMUSG00000036928.15_0	chr5	+	688	7	FSM	ENSMUSG00000036928.15	ENST00000456374.2	697	7	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCAGAGGGTCACCCT	NA	NA	NA	NA	NA	NA	NA	NA	138294968	138297126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138295088_138295588_138295688_138295884_138295965_138296227_138296336_138296540_138296656_138296778_138296889_138297069
ENSMUSG00000036932.15_0	chrX	-	2227	16	FSM	ENSMUSG00000036932.15	ENSMUST00000037349.8	2237	16	9	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTTGTTTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	47602431	47563821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_10	chrX	-	2021	16	FSM	ENSMUSG00000036932.15	ENST00000675427.1	2038	16	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATCTGTATAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	47602277	47563870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570844_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_11	chrX	-	2057	16	FSM	ENSMUSG00000036932.15	ENST00000675240.1	2076	16	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATCTGTATAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	47602374	47563870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47564066_47564439_47564573_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47573403_47573513_47574334_47574412_47575022_47575108_47583615_47583707_47585956_47586088_47586210_47586336_47588648_47588749_47593686_47593830_47602112
ENSMUSG00000036932.15_12	chrX	-	1105	8	FSM	ENSMUSG00000036932.15	ENST00000346424.6	1116	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCATCTGTATAAATGC	NA	NA	NA	NA	NA	NA	NA	NA	47602219	47563870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47564066_47564439_47564637_47566576_47566702_47569001_47569145_47570841_47570983_47571598_47571688_47572031_47572140_47602112
ENSMUSG00000036934.10_2	chr8	-	1564	4	FSM	ENSMUSG00000036934.10	ENSMUST00000047749.7	1587	4	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGCCCTTTGGCATACCA	NA	NA	NA	NA	NA	NA	NA	NA	86159445	86135393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_86136520_86138741_86138925_86153488_86153586_86159287
ENSMUSG00000036940.16_0	chr4	-	2975	19	FSM	ENSMUSG00000036940.16	ENSMUST00000116273.9	3008	19	22	11	-14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATTTATTTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	136330012	136277861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136320275_136320442_136329542
ENSMUSG00000036940.16_2	chr4	-	2999	20	FSM	ENSMUSG00000036940.16	ENSMUST00000105847.8	3028	20	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAATTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	136329978	136277863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_136278345_136279182_136279330_136279771_136279900_136281106_136281222_136281523_136281712_136282483_136282617_136284952_136285065_136285808_136285883_136286483_136286619_136287633_136287725_136288328_136288472_136295883_136295979_136297768_136297851_136299528_136299636_136300383_136300477_136301335_136301415_136304381_136304516_136309350_136309411_136320275_136320442_136329542
ENSMUSG00000036941.3_0	chr18	-	4950	4	FSM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACATTTCCTTGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	73887535	73868114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_73872372_73875407_73875873_73880237_73880403_73887472
ENSMUSG00000036941.3_1	chr18	-	4875	3	ISM	ENSMUSG00000036941.3	ENSMUST00000041138.3	4971	4	7155	11	7155	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGATCACATTTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	73880395	73868119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_73872372_73875407_73875873_73880237
ENSMUSG00000036943.10_0	chr9	-	4701	8	FSM	ENSMUSG00000036943.10	ENSMUST00000041139.9	4733	8	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGATTATGACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	66826945	66750953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66755094_66755879_66755931_66758615_66758682_66760208_66760299_66761949_66762028_66768118_66768180_66770704_66770766_66826791
ENSMUSG00000036944.7_0	chr15	-	580	5	FSM	ENSMUSG00000036944.7	ENST00000377901.8	587	5	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAAGGTATTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66431197	66410654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66410722_66423780_66423951_66426879_66427093_66429593_66429655_66431128
ENSMUSG00000036944.7_1	chr15	-	764	6	FSM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAAGGTATTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66431199	66410654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_66410722_66413421_66413604_66423780_66423951_66426879_66427093_66429593_66429655_66431128
ENSMUSG00000036944.7_2	chr15	-	510	4	ISM	ENSMUSG00000036944.7	ENST00000377901.8	587	5	1549	2	1549	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAAGGTATTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66429653	66410654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_66410722_66423780_66423951_66426879_66427093_66429593
ENSMUSG00000036944.7_3	chr15	-	693	5	ISM	ENSMUSG00000036944.7	ENST00000523829.5	769	6	1548	2	1548	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACAAGGTATTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	66429654	66410654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_66410722_66413421_66413604_66423780_66423951_66426879_66427093_66429593
ENSMUSG00000036955.17_0	chr10	-	2453	7	FSM	ENSMUSG00000036955.17	ENSMUST00000065887.14	2472	7	10	9	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTAATTACTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	62414226	62394257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036955.17_5	chr10	-	2236	6	FSM	ENSMUSG00000036955.17	ENST00000675576.1	2257	6	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGGACTGAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	62414153	62394302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62395663_62399014_62399131_62401815_62401901_62405237_62405422_62406177_62406258_62413742
ENSMUSG00000036955.17_6	chr10	-	1949	4	FSM	ENSMUSG00000036955.17	ENST00000674936.1	1971	4	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAGGACTGAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	62414152	62394302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62395663_62406177_62406258_62410828_62410928_62413742
ENSMUSG00000036957.9_0	chr7	-	2866	3	FSM	ENSMUSG00000036957.9	ENSMUST00000046351.7	2886	3	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTCGGGCTGTTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30062179	30054915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30055529_30058808_30060240_30061357
ENSMUSG00000036959.16_0	chrX	+	7418	15	FSM	ENSMUSG00000036959.16	ENSMUST00000136348.8	7446	15	23	5	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGAAAAACCCGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	47430257	47496921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47430361_47431677_47431758_47450409_47450540_47456295_47456387_47456645_47459910_47463899_47464066_47465873_47465955_47467820_47468208_47472798_47473023_47477952_47478175_47480747_47480915_47482030_47482177_47489437_47489516_47490635_47490787_47494793
ENSMUSG00000036960.11_0	chr3	-	3976	14	FSM	ENSMUSG00000036960.11	ENSMUST00000040465.11	3986	14	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATGAAGGCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	144804861	144776029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144777484_144777897_144778129_144781387_144781559_144783629_144783901_144786956_144787182_144789846_144789954_144790689_144790868_144792056_144792288_144793681_144793910_144796461_144796622_144797879_144797989_144800876_144801028_144803518_144803657_144804539
ENSMUSG00000036966.16_0	chr15	-	2440	11	FSM	ENSMUSG00000036966.16	ENSMUST00000154032.2	2456	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGACAGACGGAAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	102044660	102024969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102041998_102044570
ENSMUSG00000036966.16_1	chr15	-	1363	10	ISM	ENSMUSG00000036966.16	ENST00000547837.5	1439	11	2581	2	2581	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGTCACCAGTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	102042056	102026015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850
ENSMUSG00000036966.16_3	chr15	-	1432	11	FSM	ENSMUSG00000036966.16	ENST00000547837.5	1439	11	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGGGTCACCAGTCCATC	NA	NA	NA	NA	NA	NA	NA	NA	102044632	102026015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102026149_102026475_102026649_102026726_102026847_102027362_102027421_102027702_102027853_102036973_102037160_102038712_102038849_102039100_102039226_102040302_102040379_102041850_102042064_102044570
ENSMUSG00000036968.16_0	chr5	+	1833	6	FSM	ENSMUSG00000036968.16	ENSMUST00000110934.9	1855	6	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTCAGAAGTTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	138185756	138192168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138185983_138188531_138188659_138188754_138188852_138190099_138190223_138190822_138190941_138191026
ENSMUSG00000036972.15_0	chr9	+	813	3	FSM	ENSMUSG00000036972.15	ENST00000491672.5	829	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAATGGTACGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	91250859	91266374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_91251280_91254660_91254746_91266066
ENSMUSG00000036972.15_1	chr9	+	3958	5	FSM	ENSMUSG00000036972.15	ENST00000525172.6	3977	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTGTGTATATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91253281	91271217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_91253587_91254660_91254746_91260837_91261456_91266066_91266387_91268587
ENSMUSG00000036972.15_8	chr9	+	3548	3	FSM	ENSMUSG00000036972.15	ENST00000425731.7	3575	3	10	17	10	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAAAAAAGTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	91260847	91271207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_91261456_91266066_91266387_91268587
ENSMUSG00000036975.6_0	chr1	-	3317	2	FSM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	3	21	3	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTCTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119840935	119835640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119838885_119840862
ENSMUSG00000036975.6_1	chr1	-	3238	1	ISM	ENSMUSG00000036975.6	ENSMUST00000037906.6	3341	2	2060	21	2060	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTCTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119838878	119835640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_119835600_119838900
ENSMUSG00000036977.9_0	chr8	+	1075	5	FSM	ENSMUSG00000036977.9	ENST00000613466.4	1097	5	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAAAAGAAAACTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	80438069	80502007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_80438359_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_1	chr8	+	2794	5	FSM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTCTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	80438448	80503942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_80438474_80439733_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_3	chr8	+	4570	5	FSM	ENSMUSG00000036977.9	ENSMUST00000210812.2	4591	5	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80438496	80505684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_80438604_80439781_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036977.9_4	chr8	+	2754	4	ISM	ENSMUSG00000036977.9	ENSMUST00000048147.9	2801	5	1300	7	1269	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTCTGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	80439748	80503942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_80439909_80446286_80446378_80455758_80455880_80501560
ENSMUSG00000036980.14_0	chr5	-	2298	15	FSM	ENSMUSG00000036980.14	ENSMUST00000048698.14	2304	15	1	5	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	138185487	138176883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185431
ENSMUSG00000036980.14_1	chr5	-	2236	14	ISM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	2667	0	2664	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	138182803	138176883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593
ENSMUSG00000036980.14_13	chr5	-	2662	15	FSM	ENSMUSG00000036980.14	ENST00000344095.8	2676	15	8	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAAGTTTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	138185462	138176889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185036
ENSMUSG00000036980.14_3	chr5	-	2303	15	FSM	ENSMUSG00000036980.14	ENSMUST00000110936.8	2308	15	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGTGAGCCTCCCGCA	NA	NA	NA	NA	NA	NA	NA	NA	138185713	138176883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185652
ENSMUSG00000036980.14_7	chr5	-	2269	15	FSM	ENSMUSG00000036980.14	ENST00000452041.5	2276	15	0	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTAAGTTTGTGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	138185485	138176889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138177410_138177674_138177873_138178041_138178216_138179152_138179279_138179379_138179455_138180169_138180353_138180462_138180565_138180675_138180754_138180859_138181006_138181356_138181477_138181575_138181633_138181829_138181984_138182100_138182188_138182593_138182810_138185452
ENSMUSG00000036983.8_0	chr17	-	2307	8	FSM	ENSMUSG00000036983.8	ENST00000367166.5	2324	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACATTTTTCTCCACATGA	NA	NA	NA	NA	NA	NA	NA	NA	3607981	3568371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_3569264_3569442_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036983.8_8	chr17	-	1387	7	FSM	ENSMUSG00000036983.8	ENSMUST00000041003.8	1402	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAGCAAAACCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	3608048	3569537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_3570071_3571919_3572048_3586352_3586473_3593371_3593524_3595857_3595967_3605206_3605359_3607855
ENSMUSG00000036985.13_0	chrX	-	2964	10	FSM	ENSMUSG00000036985.13	ENSMUST00000037960.11	2982	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAAGATGCCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	47297553	47260852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47262519_47266916_47267014_47267385_47267490_47270123_47270227_47270975_47271025_47271897_47272036_47280097_47280257_47283436_47283598_47295544_47295835_47297356
ENSMUSG00000036986.17_0	chr9	-	4465	9	FSM	ENSMUSG00000036986.17	ENSMUST00000085673.11	4481	9	7	9	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTAACATTCTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	58157062	58125367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58127853_58128997_58129149_58136637_58136691_58137110_58137370_58137773_58137912_58140435_58140531_58141635_58142217_58154257_58154722_58156823
ENSMUSG00000036986.17_12	chr9	-	1348	3	ISM	ENSMUSG00000036986.17	ENST00000354026.10	1390	4	14	448	14	-448	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGGATTAGGCAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58154697	58137110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_58137406_58141603_58142217_58154257
ENSMUSG00000036986.17_4	chr9	-	1177	4	FSM	ENSMUSG00000036986.17	ENST00000567543.5	1189	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAACACGGACTTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	58154702	58136634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58136691_58140435_58140531_58141635_58142217_58154257
ENSMUSG00000036986.17_5	chr9	-	1376	4	FSM	ENSMUSG00000036986.17	ENST00000354026.10	1390	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCAGAGGATTCGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	58154702	58136667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58136691_58137110_58137406_58141603_58142217_58154257
ENSMUSG00000036989.17_0	chr7	-	2993	12	FSM	ENSMUSG00000036989.17	ENSMUST00000057525.14	3016	12	14	9	-9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTATTAATATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	105282753	105259685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282609
ENSMUSG00000036989.17_3	chr7	-	2829	12	FSM	ENSMUSG00000036989.17	ENSMUST00000106789.8	2841	12	6	6	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTTTTGCTAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	105282738	105259860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282583
ENSMUSG00000036989.17_4	chr7	-	2966	12	FSM	ENSMUSG00000036989.17	ENSMUST00000147044.4	2972	12	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGTTTTTGCTAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	105282690	105259860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105260418_105260535_105260677_105261813_105261885_105262104_105262274_105262455_105262624_105266647_105266752_105266948_105267682_105267872_105268054_105268265_105268418_105268589_105268822_105274612_105274779_105282398
ENSMUSG00000036990.14_1	chr8	+	7343	21	FSM	ENSMUSG00000036990.14	ENSMUST00000173078.8	7354	21	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGAGGATGAATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	80366250	80404346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_80366694_80370382_80370467_80372926_80372978_80377634_80377682_80378300_80378374_80379991_80380074_80382288_80382422_80385537_80385593_80385812_80385931_80386026_80386092_80387666_80387765_80390353_80390455_80390550_80390741_80391609_80391773_80393344_80393469_80394229_80394286_80395065_80395141_80395902_80396042_80396552_80396808_80397674_80397716_80399396
ENSMUSG00000036992.11_0	chr2	+	1106	3	FSM	ENSMUSG00000036992.11	ENSMUST00000109961.8	1116	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	148514530	148517947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_148514756_148516383_148516519_148517201
ENSMUSG00000036992.11_1	chr2	+	945	2	FSM	ENSMUSG00000036992.11	ENSMUST00000047177.4	956	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTCTAAATCTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	148514556	148517947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_148514756_148517201
ENSMUSG00000036995.8_0	chr4	+	4214	25	FSM	ENSMUSG00000036995.8	ENSMUST00000047526.8	4225	25	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTTCTGGTGATTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	135933685	135972526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135933959_135954718_135954792_135954873_135955020_135955709_135955785_135956710_135956761_135960549_135960662_135960874_135960961_135961334_135961411_135961638_135961726_135961894_135962005_135963685_135963756_135964007_135964096_135965486_135965536_135965642_135965831_135965909_135966044_135966202_135966298_135966491_135966670_135967428_135967515_135967661_135967778_135968316_135968385_135968465_135968577_135968683_135968880_135969966_135970193_135970758_135970853_135971099
ENSMUSG00000037001.11_0	chr11	-	3880	5	FSM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGACACCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58795046	58778983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568_58793734_58794940
ENSMUSG00000037001.11_1	chr11	-	3775	4	ISM	ENSMUSG00000037001.11	ENSMUST00000102703.2	3890	5	1317	5	1317	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATGACACCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58793734	58778983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_58782373_58783787_58783881_58791390_58791518_58793568
ENSMUSG00000037003.17_0	chr15	+	4748	29	FSM	ENSMUSG00000037003.17	ENSMUST00000169627.9	4761	29	5	8	5	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTTGAGGAGTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	102011373	102024828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037003.17_11	chr15	+	4612	28	FSM	ENSMUSG00000037003.17	ENSMUST00000230474.2	4637	28	16	9	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTTTGAGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102012875	102024826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037003.17_13	chr15	+	4325	29	ISM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	1446	9	108	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTTTGAGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102012967	102024826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037003.17_2	chr15	+	4697	29	FSM	ENSMUSG00000037003.17	ENSMUST00000046144.10	4718	29	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATTTCTATAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	102011432	102024815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020729_102020842_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037003.17_4	chr15	+	4400	30	FSM	ENSMUSG00000037003.17	ENST00000549700.5	4412	30	3	9	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACTTTTGAGGAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102011524	102024826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102011597_102012964_102013074_102013773_102013812_102014678_102014718_102015025_102015065_102015223_102015274_102015449_102015622_102015916_102015968_102016236_102016360_102016445_102016511_102017289_102017374_102017755_102017869_102017947_102018009_102018134_102018211_102018905_102019036_102019113_102019180_102019305_102019420_102019516_102020442_102020636_102020729_102020863_102021012_102021101_102021668_102021770_102021861_102022144_102022271_102022475_102022569_102022695_102022774_102022905_102022984_102023424_102023594_102023995_102024065_102024171_102024202_102024292
ENSMUSG00000037007.18_0	chr5	-	6455	5	FSM	ENSMUSG00000037007.18	ENSMUST00000049393.15	6470	5	8	7	-6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAAGAATTGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	138153998	138137970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138151106_138151232_138153891
ENSMUSG00000037007.18_1	chr5	-	1438	4	FSM	ENSMUSG00000037007.18	ENST00000412947.6	1449	4	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTTTAATAGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	138153984	138142848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138143975_138148868_138148996_138149466_138149559_138153891
ENSMUSG00000037007.18_2	chr5	-	1346	3	ISM	ENSMUSG00000037007.18	ENSMUST00000165640.8	1320	4	1602	-80	1602	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTTTTAATAGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	138149559	138142848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_138143975_138148868_138148996_138149466
ENSMUSG00000037007.18_3	chr5	-	347	2	FSM	ENSMUSG00000037007.18	ENST00000250076.7	365	2	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGGAGGGAAGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	138143563	138143131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138143365_138143449
ENSMUSG00000037010.8_0	chrX	-	3134	3	FSM	ENSMUSG00000037010.8	ENSMUST00000039026.8	3149	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGATTCTGCCCCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	47123721	47114028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_47116585_47117170_47117343_47123315
ENSMUSG00000037012.19_0	chr10	-	4267	18	FSM	ENSMUSG00000037012.19	ENSMUST00000099691.11	4278	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGGTTCAGACAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	62176310	62104633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62175791
ENSMUSG00000037012.19_3	chr10	-	3836	22	FSM	ENSMUSG00000037012.19	ENSMUST00000116238.9	3851	22	7	8	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAAAGTCGGAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62215680	62104890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62188836_62188885_62194114_62194210_62200801_62200848_62215593
ENSMUSG00000037012.19_5	chr10	-	3558	18	ISM	ENSMUSG00000037012.19	ENSMUST00000072357.14	3639	20	42812	8	24992	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTCAAAAGTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	62151329	62104894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164
ENSMUSG00000037012.19_6	chr10	-	3635	20	FSM	ENSMUSG00000037012.19	ENSMUST00000072357.14	3639	20	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAAAGTCGGAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	62194141	62104890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62188836_62188885_62194114
ENSMUSG00000037012.19_7	chr10	-	3602	19	ISM	ENSMUSG00000037012.19	ENSMUST00000072357.14	3639	20	5259	8	5259	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGATTCAAAAGTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	62188882	62104894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_62105836_62107367_62107602_62110225_62110382_62111459_62111644_62116811_62116912_62117589_62117686_62120057_62120178_62120479_62120629_62122126_62122432_62125938_62126173_62127753_62127823_62128092_62128249_62131481_62131666_62131774_62131875_62132455_62132552_62134928_62135049_62140498_62140648_62151164_62151328_62188836
ENSMUSG00000037013.18_0	chr18	-	4129	10	FSM	ENSMUSG00000037013.18	ENSMUST00000040964.13	4153	10	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCACAGACTCGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	14815809	14757264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037013.18_1	chr18	-	3090	11	FSM	ENSMUSG00000037013.18	ENSMUST00000040924.9	3098	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTTCTTTAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	14815963	14758679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14770448_14770542_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037013.18_3	chr18	-	2896	10	FSM	ENSMUSG00000037013.18	ENSMUST00000092041.11	2911	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAATTTTCTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	14815875	14758692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14784079_14784302_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037013.18_8	chr18	-	2591	9	FSM	ENSMUSG00000037013.18	ENSMUST00000234524.2	2603	9	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCTAACGAAAGAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14815820	14758720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_14760369_14766599_14766734_14769552_14769676_14773313_14773419_14774012_14774181_14788083_14788238_14803365_14803451_14812443_14812521_14815723
ENSMUSG00000037017.16_0	chr5	+	2244	5	FSM	ENSMUSG00000037017.16	ENSMUST00000062350.15	2252	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATCATGTAGCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	138115164	138132467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138115251_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUSG00000037017.16_1	chr5	+	2292	5	FSM	ENSMUSG00000037017.16	ENSMUST00000110961.9	2310	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTTTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	138115185	138132517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138115270_138116097_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUSG00000037017.16_2	chr5	+	2124	4	FSM	ENSMUSG00000037017.16	ENSMUST00000080732.10	2134	4	1	9	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATCATGTAGCGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	138115199	138132467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138115251_138123239_138123953_138124715_138124909_138131300
ENSMUSG00000037017.16_3	chr5	+	2191	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110960.9	2204	4	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTTTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	138115201	138132517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138115270_138123239_138123953_138124715_138124909_138131300
ENSMUSG00000037017.16_5	chr5	+	2872	4	FSM	ENSMUSG00000037017.16	ENSMUST00000110959.2	2964	4	86	6	86	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTAGCGTCTCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	138115388	138132472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138116183_138123239_138123953_138124715_138124909_138131300
ENSMUSG00000037017.16_6	chr5	+	2074	3	ISM	ENSMUSG00000037017.16	ENSMUST00000110959.2	2964	4	7944	3	7944	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGCGTCTCAGGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	138123246	138132475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_138123953_138124715_138124909_138131300
ENSMUSG00000037020.17_0	chr7	-	4726	33	FSM	ENSMUSG00000037020.17	ENSMUST00000108190.8	4742	33	14	2	14	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTCCCTGTCTATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	29979830	29939564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29939910_29940002_29940140_29940655_29941253_29941438_29941491_29941569_29941700_29941822_29941938_29942170_29942303_29942458_29942567_29942855_29942960_29943257_29943386_29943897_29943964_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037020.17_21	chr7	-	1202	9	FSM	ENSMUSG00000037020.17	ENST00000680321.1	1219	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAGAGGTGAGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	29979750	29964515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29964682_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037020.17_6	chr7	-	4403	29	FSM	ENSMUSG00000037020.17	ENST00000680564.1	4418	29	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGACAGTTGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29979753	29939585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29939910_29940002_29940140_29940655_29941310_29941503_29941700_29941812_29941938_29942855_29942960_29943257_29943386_29944711_29944931_29947040_29947094_29949203_29949338_29950102_29950226_29950816_29950881_29950957_29951070_29951740_29951817_29953407_29953530_29953610_29953679_29955229_29955356_29957480_29957573_29960712_29960892_29962036_29962175_29964506_29964697_29967206_29967368_29969573_29969757_29970103_29970242_29971031_29971203_29971751_29971810_29973372_29973436_29974526_29974619_29979580
ENSMUSG00000037022.4_0	chr8	-	5606	6	ISM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	13297	6	13297	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACCCTGTATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80008269	79990232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805
ENSMUSG00000037022.4_1	chr8	-	5644	7	FSM	ENSMUSG00000037022.4	ENSMUST00000048718.4	5650	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTACCCTGTATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80021566	79990232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79994845_79995761_79995912_79997518_79997605_80000732_80000904_80004830_80004954_80007805_80008284_80021542
ENSMUSG00000037029.9_0	chr7	-	2019	2	FSM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGAAAGCAGAAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	29869147	29860698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29862654_29869083
ENSMUSG00000037029.9_1	chr7	-	1946	1	ISM	ENSMUSG00000037029.9	ENSMUST00000062181.9	2029	2	6508	5	6508	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGAAAGCAGAAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	29862644	29860698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_29860700_29862600
ENSMUSG00000037031.11_0	chr10	-	3622	8	FSM	ENSMUSG00000037031.11	ENSMUST00000047883.11	3638	8	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCTTCTGTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62067021	62021181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62023942_62024421_62024539_62025592_62025641_62027246_62027364_62029645_62029742_62037556_62037632_62038858_62039045_62066798
ENSMUSG00000037032.17_0	chr7	-	2699	14	FSM	ENSMUSG00000037032.17	ENSMUST00000191011.7	2712	14	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCTTCCTGTGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	105230847	105207689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230689
ENSMUSG00000037032.17_4	chr7	-	2675	14	FSM	ENSMUSG00000037032.17	ENSMUST00000189378.7	2878	14	222	-19	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105230476	105207690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105222888_105223624_105230341
ENSMUSG00000037032.17_6	chr7	-	1937	13	FSM	ENSMUSG00000037032.17	ENSMUST00000187057.7	1630	13	27	-334	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105217957	105207690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105217825
ENSMUSG00000037032.17_7	chr7	-	2072	13	NIC	ENSMUSG00000037032.17	novel	2085	14	NA	NA	7	0	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTCCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105218713	105207690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_105208258_105208338_105208516_105208649_105208766_105214178_105214263_105214507_105214593_105214739_105214855_105215257_105215386_105215754_105215905_105216289_105216354_105216460_105216547_105216634_105216692_105216784_105216961_105218446
ENSMUSG00000037035.6_0	chr1	-	4241	2	FSM	ENSMUSG00000037035.6	ENSMUST00000038765.6	4255	2	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGGCTTCCTGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	119349968	119343198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119345828_119348356
ENSMUSG00000037049.10_0	chr7	+	2393	6	FSM	ENSMUSG00000037049.10	ENSMUST00000046983.10	2412	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCACCGTTCCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	105203577	105207588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105204045_105204428_105205202_105205713_105205886_105206124_105206202_105206556_105206703_105206830
ENSMUSG00000037053.7_0	chr5	+	312	2	FSM	ENSMUSG00000037053.7	ENST00000454506.2	321	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGACACTACAGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	137979820	137983633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137979887_137983387
ENSMUSG00000037053.7_1	chr5	+	237	1	ISM	ENSMUSG00000037053.7	ENSMUST00000035390.7	1297	4	3593	4865	3573	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACAAGGACACTACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	137983393	137983630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_137983400_137983600
ENSMUSG00000037058.17_1	chr18	+	1456	4	FSM	ENSMUSG00000037058.17	ENSMUST00000041314.17	1475	4	11	8	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCGAGCTGGTGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	35731680	35750231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35731813_35743923_35744088_35746375_35746556_35749251
ENSMUSG00000037058.17_11	chr18	+	452	3	FSM	ENSMUSG00000037058.17	ENST00000511706.5	463	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTAATAAAAGTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	35731718	35749445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35731813_35743923_35744088_35749251
ENSMUSG00000037058.17_9	chr18	+	1496	5	FSM	ENSMUSG00000037058.17	ENSMUST00000235400.2	1522	5	16	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTAGAACCGAGCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35731717	35750226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35731813_35741790_35741873_35743923_35744088_35746375_35746556_35749251
ENSMUSG00000037060.4_0	chr7	-	1644	2	FSM	ENSMUSG00000037060.4	ENSMUST00000047040.4	1662	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2880	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCATGTTTTTTAGATC	NA	NA	NA	NA	NA	NA	NA	NA	105131495	105129295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105130427_105130982
ENSMUSG00000037062.14_14	chr3	-	3945	9	FSM	ENSMUSG00000037062.14	ENSMUST00000163279.6	3961	9	12	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	144426084	144394608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUSG00000037062.14_2	chr3	-	2565	10	FSM	ENSMUSG00000037062.14	ENSMUST00000199531.5	2584	10	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCACACTTACTCACCGG	NA	NA	NA	NA	NA	NA	NA	NA	144425861	144389447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144390901_144397218_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144418347_144418490_144425742
ENSMUSG00000037062.14_34	chr3	-	1498	8	FSM	ENSMUSG00000037062.14	ENST00000535010.5	1523	8	8	17	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAATAAAGTAAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	144425966	144396795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144397294_144397660_144397890_144402614_144402716_144403138_144403229_144411273_144411367_144412358_144412493_144414993_144415123_144425742
ENSMUSG00000037070.11_0	chr8	-	1679	2	FSM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	8	8	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAATTTTCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79235519	79231905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79233493_79235427
ENSMUSG00000037070.11_1	chr8	-	1542	1	ISM	ENSMUSG00000037070.11	ENSMUST00000049245.10	1695	2	2080	8	2061	0	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAATTTTCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79233447	79231905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_79231900_79233400
ENSMUSG00000037070.11_2	chr8	-	1619	2	FSM	ENSMUSG00000037070.11	ENSMUST00000211719.2	1622	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCAATTTTCTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	79235505	79231905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_79233447_79235427
ENSMUSG00000037071.4_0	chr19	-	4811	6	FSM	ENSMUSG00000037071.4	ENSMUST00000041331.4	4832	6	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTGGGAGCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	44396133	44382899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44386558_44388580_44388814_44390131_44390338_44391603_44391735_44394925_44395200_44395824
ENSMUSG00000037072.17_0	chr3	+	1497	5	FSM	ENSMUSG00000037072.17	ENSMUST00000082437.11	1514	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGTCTGCTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	144276197	144303435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_144276561_144283346_144283515_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037072.17_7	chr3	+	523	4	FSM	ENSMUSG00000037072.17	ENST00000401030.4	533	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTACATCATTAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	144283358	144302806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_144283545_144296372_144296437_144300661_144300712_144302583
ENSMUSG00000037075.8_0	chr15	+	4330	2	FSM	ENSMUSG00000037075.8	ENSMUST00000036904.7	4348	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATAGCATTCTGGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	58761086	58774230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58761344_58770157
ENSMUSG00000037085.9_0	chr15	+	4436	1	FSM	ENSMUSG00000037085.9	ENSMUST00000036937.9	4454	1	10	8	10	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	451	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAACTCTTATTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58744532	58748968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58744500_58749000
ENSMUSG00000037089.12_0	chr17	+	1896	4	FSM	ENSMUSG00000037089.12	ENSMUST00000224905.2	1906	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGTTTTGGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	45874809	45878596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45877234
ENSMUSG00000037089.12_4	chr17	+	1292	3	FSM	ENSMUSG00000037089.12	ENST00000538577.5	1303	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGCAGTAAAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	45874831	45878169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45874995_45875505_45875700_45877234
ENSMUSG00000037089.12_6	chr17	+	833	4	FSM	ENSMUSG00000037089.12	ENSMUST00000226086.2	850	4	9	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGTATGTGGAGCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	45874894	45876973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45874995_45875505_45875700_45875850_45876006_45876589
ENSMUSG00000037098.19_0	chr17	-	3258	12	FSM	ENSMUSG00000037098.19	ENSMUST00000118828.8	3271	12	6	7	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGAGCCGGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26240828	26208016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26240661
ENSMUSG00000037098.19_1	chr17	-	5352	15	FSM	ENSMUSG00000037098.19	ENSMUST00000122103.9	5383	15	24	7	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGGAGCCGGCTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26288495	26208016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26230970_26231106_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ENSMUSG00000037098.19_4	chr17	-	3323	12	FSM	ENSMUSG00000037098.19	ENSMUST00000148021.3	3333	12	4	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCACACGGAGCCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	26237430	26208021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26237193
ENSMUSG00000037098.19_5	chr17	-	5246	14	FSM	ENSMUSG00000037098.19	ENSMUST00000120691.9	5249	14	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGCACACGGAGCCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	26288529	26208021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26209860_26209949_26210091_26210231_26210388_26210636_26210775_26211555_26211638_26213159_26213301_26216902_26217007_26223524_26223619_26227828_26227865_26232747_26232892_26234917_26235130_26243348_26243441_26255562_26255657_26286555
ENSMUSG00000037101.17_0	chr8	+	1122	7	ISM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	13	6225	13	-6225	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACCCGATTCTAGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	78972744	79060396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097_79052222_79060182
ENSMUSG00000037101.17_1	chr8	+	1143	8	FSM	ENSMUSG00000037101.17	ENST00000504425.5	1161	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACAGCTGGTGCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	78972743	79066615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_78972952_78978351_78978538_79003371_79003585_79008930_79009017_79042301_79042394_79052097_79052222_79060182_79060395_79066593
ENSMUSG00000037103.9_0	chr8	-	2306	13	FSM	ENSMUSG00000037103.9	ENSMUST00000041367.9	2312	13	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84831388	84823703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84824138_84824251_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUSG00000037103.9_1	chr8	-	2187	13	FSM	ENSMUSG00000037103.9	ENSMUST00000210279.2	2199	13	9	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGCCTGGTGTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	84831383	84823703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84824138_84824365_84824482_84824564_84824670_84824827_84824914_84824990_84825120_84825207_84825300_84825386_84825822_84828304_84828476_84828560_84828701_84828792_84828900_84829374_84829511_84829584_84829683_84831245
ENSMUSG00000037104.10_0	chr17	+	4242	2	FSM	ENSMUSG00000037104.10	ENST00000306503.5	4255	2	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTTTATGTTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	87414755	87445138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87414909_87441049
ENSMUSG00000037104.10_1	chr17	+	4636	3	FSM	ENSMUSG00000037104.10	ENSMUST00000041369.8	4648	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTCCCCCCTCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	87415117	87445266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_87415476_87428175_87428237_87441049
ENSMUSG00000037106.9_0	chr15	+	5714	41	NNC	ENSMUSG00000037106.9	novel	5714	41	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGGGCCCTCTAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	58381899	58534782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_+_58381976_58413968_58414055_58420167_58420283_58421905_58421961_58422052_58422185_58425504_58425568_58429698_58429778_58430097_58430255_58431026_58431214_58432321_58432515_58435668_58436022_58440954_58441064_58443220_58443405_58445437_58445559_58447097_58447199_58449723_58449815_58453712_58453833_58455180_58455334_58462238_58462417_58466699_58466825_58472160_58472296_58474005_58474156_58490323_58490435_58490675_58490838_58492225_58492407_58494142_58494370_58496989_58497116_58498091_58498129_58499352_58499478_58501169_58501302_58502478_58502605_58505510_58505639_58509771_58509943_58511937_58512099_58513670_58513814_58515249_58515339_58515710_58515810_58518764_58519007_58520479_58520644_58532601_58532703_58534556
ENSMUSG00000037108.14_0	chr5	+	2204	17	FSM	ENSMUSG00000037108.14	ENSMUST00000035852.14	2222	17	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGCTGTGCTTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	137786072	137820878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137786208_137793752_137793808_137794833_137795079_137796159_137796236_137797769_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137817225_137817287_137817703_137817839_137820415
ENSMUSG00000037108.14_3	chr5	+	1785	15	FSM	ENSMUSG00000037108.14	ENST00000360951.8	1800	15	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGCAGAGAGGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	137790129	137820675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137790218_137793752_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810363_137815154_137815239_137815719_137815787_137816059_137816155_137820415
ENSMUSG00000037108.14_8	chr5	+	1480	12	FSM	ENSMUSG00000037108.14	ENST00000684423.1	1495	12	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGCAGAGAGGCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	137790129	137820675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137790218_137793752_137793808_137794833_137795079_137796159_137796236_137797742_137797864_137798247_137798406_137799235_137799359_137808277_137808395_137809074_137809196_137809836_137809913_137810263_137810304_137820415
ENSMUSG00000037110.21_0	chr2	-	11023	41	FSM	ENSMUSG00000037110.21	ENSMUST00000109986.9	11030	41	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTCAAATAGAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	146353917	146081798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_146086956_146090088_146090129_146102285_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229526_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146253965_146254080_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ENSMUSG00000037110.21_5	chr2	-	5713	38	FSM	ENSMUSG00000037110.21	ENST00000202677.12	5729	38	11	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGGTGAGTGTCTACATG	NA	NA	NA	NA	NA	NA	NA	NA	146353919	146102290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_146102408_146156842_146156971_146169297_146169457_146175335_146175492_146176411_146176536_146182298_146182371_146183897_146184670_146187305_146187490_146188628_146188767_146189035_146189105_146190367_146190479_146195090_146195200_146199007_146199067_146199876_146200006_146203310_146203440_146229147_146229304_146229522_146229626_146230410_146230605_146246782_146246960_146248261_146248353_146252092_146252191_146254653_146254789_146263512_146263678_146266536_146266775_146270524_146270637_146273737_146273887_146276699_146276838_146277758_146277927_146285703_146285932_146289195_146289396_146291129_146291269_146292371_146292488_146293602_146293781_146295328_146295373_146302633_146302692_146321296_146321350_146327040_146327152_146353713
ENSMUSG00000037111.10_0	chr3	-	7387	8	FSM	ENSMUSG00000037111.10	ENSMUST00000037141.9	7411	8	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAATATACAATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	51468292	51422755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51428909_51434265_51434424_51437491_51437610_51440395_51440478_51443886_51444077_51450052_51450255_51457655_51457786_51467938
ENSMUSG00000037112.17_0	chr9	-	5341	15	FSM	ENSMUSG00000037112.17	ENSMUST00000176824.8	5369	15	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCAATATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	50920219	50804111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50807262_50807943_50808036_50808672_50808784_50809487_50809652_50809781_50810067_50810619_50810849_50818706_50818872_50824683_50824837_50826741_50826963_50828313_50828438_50828827_50828953_50846715_50846878_50906907_50906972_50909799_50909917_50920040
ENSMUSG00000037119.5_0	chr15	+	5536	24	FSM	ENSMUSG00000037119.5	ENSMUST00000037270.5	5560	24	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGTTACTGTGGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	58287334	58329583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_58287627_58292047_58292133_58293594_58293747_58295169_58295228_58296045_58296114_58296625_58296740_58298442_58298534_58298902_58298966_58301840_58301948_58302027_58302067_58302510_58302624_58303054_58303171_58304363_58304477_58304742_58304830_58306512_58306646_58313426_58313576_58314680_58314816_58315009_58315124_58319434_58319508_58320191_58320342_58321779_58321885_58322386_58322511_58324831_58324902_58326598
ENSMUSG00000037126.17_0	chr19	-	2005	8	FSM	ENSMUSG00000037126.17	ENSMUST00000224556.2	2034	8	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGGCTGGGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	46306507	46300531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46301369_46301740_46301885_46302092_46302238_46302614_46302773_46302901_46302973_46303051_46303243_46304471_46304516_46306092
ENSMUSG00000037129.8_2	chr9	+	1427	9	FSM	ENSMUSG00000037129.8	ENST00000526090.1	1449	9	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAACTATGCACTTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	45239754	45251375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45240088_45241162_45241268_45243764_45243888_45244845_45244976_45247391_45247485_45248343_45248388_45249553_45249717_45250532_45250850_45251256
ENSMUSG00000037134.18_0	chr8	+	2762	12	FSM	ENSMUSG00000037134.18	ENSMUST00000056237.15	2781	12	11	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTTAAAGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	78276036	78307959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_78276366_78282293_78282443_78285507_78285745_78287435_78287604_78289042_78289146_78290604_78290712_78291582_78291776_78294803_78294988_78298637_78299356_78303966_78304121_78307254_78307378_78307662
ENSMUSG00000037138.19_0	chr1	-	5924	23	FSM	ENSMUSG00000037138.19	ENSMUST00000238906.2	5948	23	12	12	-4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAATCACCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38666270	38216418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_38218652_38220340_38220565_38220695_38220746_38224405_38224500_38226016_38226089_38230251_38230389_38232646_38232711_38242891_38243020_38243970_38244173_38246986_38247112_38248633_38249729_38257343_38257537_38291721_38291763_38308790_38308843_38359192_38359245_38368952_38368990_38380801_38380883_38445576_38445625_38573986_38574373_38574491_38574805_38575906_38576028_38578007_38578083_38666169
ENSMUSG00000037143.18_0	chr2	+	2255	16	FSM	ENSMUSG00000037143.18	ENSMUST00000126415.8	2256	16	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGAATGGATGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	145776703	145884992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_145776761_145781759_145781912_145788965_145789117_145791838_145791916_145792678_145792747_145792977_145793105_145805217_145805351_145815391_145815552_145843774_145843840_145850787_145850872_145853997_145854174_145856219_145856260_145859237_145859378_145877106_145877234_145878736_145878815_145884372
ENSMUSG00000037143.18_2	chr2	+	2188	15	ISM	ENSMUSG00000037143.18	ENSMUST00000126415.8	2256	16	5054	13	5022	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACCATTTCCATAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	145781757	145884980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_145781912_145788965_145789117_145791838_145791916_145792678_145792747_145792977_145793105_145805217_145805351_145815391_145815552_145843774_145843840_145850787_145850872_145853997_145854174_145856219_145856260_145859237_145859378_145877106_145877234_145878736_145878815_145884372
ENSMUSG00000037148.9_0	chr8	-	3065	23	FSM	ENSMUSG00000037148.9	ENSMUST00000076316.6	3084	23	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACTATTTGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78244572	77977003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_77977637_77983954_77984047_77985685_77985839_78003776_78003937_78037359_78037511_78071268_78071429_78072900_78073007_78078242_78078302_78085175_78085264_78091714_78091790_78109353_78109420_78111379_78111426_78115282_78115365_78136176_78136272_78137650_78137758_78140126_78140257_78146700_78146806_78147265_78147377_78152958_78153061_78159368_78159441_78177321_78177384_78177456_78177553_78244258
ENSMUSG00000037149.11_0	chr12	-	4825	26	FSM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAACCTTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13299204	13266980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026_13296079_13299104
ENSMUSG00000037149.11_2	chr12	-	4726	25	ISM	ENSMUSG00000037149.11	ENSMUST00000071103.10	4842	26	3135	7	3059	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAACCTTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13296079	13266980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289569_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13295686_13295751_13296026
ENSMUSG00000037149.11_28	chr12	-	2271	24	FSM	ENSMUSG00000037149.11	ENST00000621973.2	2280	24	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACTATATTTTCATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	13299138	13269316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_13269630_13270347_13270469_13270738_13270835_13273676_13273720_13273793_13273867_13273942_13274016_13275399_13275492_13277305_13277453_13279093_13279146_13279242_13279432_13280292_13280383_13281445_13281545_13284040_13284102_13285994_13286134_13287213_13287329_13287729_13287807_13289106_13289180_13289491_13289533_13290559_13290644_13290851_13290936_13292300_13292349_13293860_13293958_13294968_13294999_13299104
ENSMUSG00000037151.9_0	chr10	+	3198	5	FSM	ENSMUSG00000037151.9	ENSMUST00000049242.9	3216	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCATCCGCTGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	61311590	61418563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61311669_61318114_61318262_61362838_61362989_61383826_61383995_61415908
ENSMUSG00000037151.9_2	chr10	+	1308	4	FSM	ENSMUSG00000037151.9	ENST00000373224.5	1325	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGATGCTGTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	61362848	61418545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61362989_61383826_61383995_61415908_61416793_61418429
ENSMUSG00000037151.9_7	chr10	+	1161	3	FSM	ENSMUSG00000037151.9	ENST00000358141.6	1175	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGATGCTGTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	61383833	61418545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61383995_61415908_61416793_61418429
ENSMUSG00000037151.9_8	chr10	+	1149	3	NNC	ENSMUSG00000037151.9	novel	1175	3	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGATGCTGTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	61383842	61418545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_+_61383995_61415908_61416790_61418429
ENSMUSG00000037152.12_0	chr3	-	1231	4	FSM	ENSMUSG00000037152.12	ENSMUST00000038108.12	1249	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAAGGAAGACAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	51316400	51312106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51313041_51314756_51314834_51315565_51315670_51316284
ENSMUSG00000037157.9_0	chr4	+	1699	6	FSM	ENSMUSG00000037157.9	ENST00000270800.2	1713	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGATCGGAGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	135460295	135478675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135460426_135461412_135461592_135464650_135464827_135471996_135472136_135475401_135475524_135477722
ENSMUSG00000037159.12_0	chr6	+	2010	12	FSM	ENSMUSG00000037159.12	ENST00000397541.6	2021	12	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCACTGGGGTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	40420629	40443220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40421236_40426556_40426754_40429535_40429588_40432005_40432183_40433833_40433953_40437938_40438086_40438890_40438999_40439116_40439203_40440059_40440231_40441073_40441217_40442749_40442878_40443144
ENSMUSG00000037159.12_23	chr6	+	620	5	FSM	ENSMUSG00000037159.12	ENST00000529830.1	635	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGTATAAATTAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	40432021	40439197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40432183_40433833_40433953_40437938_40438090_40438890_40438999_40439116
ENSMUSG00000037161.15_0	chr3	-	1217	4	FSM	ENSMUSG00000037161.15	ENSMUST00000038154.12	1232	4	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCCTAAATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51303967	51295845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847
ENSMUSG00000037161.15_1	chr3	-	1225	5	FSM	ENSMUSG00000037161.15	ENSMUST00000141156.3	1246	5	2	19	2	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTAGAAAATCCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	51304157	51295851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51296745_51298646_51298741_51299245_51299350_51303847_51303916_51304091
ENSMUSG00000037166.6_1	chr7	+	492	3	FSM	ENSMUSG00000037166.6	ENST00000301242.9	506	3	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTCTGGTGTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	28988768	28992810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28988961_28990934_28991020_28992595
ENSMUSG00000037166.6_3	chr7	+	378	3	FSM	ENSMUSG00000037166.6	ENST00000591291.5	391	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCCTCTGGTGTCCGGA	NA	NA	NA	NA	NA	NA	NA	NA	28988767	28992810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28988961_28990934_28991016_28992706
ENSMUSG00000037169.16_0	chr12	-	1680	2	FSM	ENSMUSG00000037169.16	ENST00000638417.1	1702	2	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATGATGCAAGGCGA	NA	NA	NA	NA	NA	NA	NA	NA	12991813	12986108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_12987612_12991636
ENSMUSG00000037172.15_0	chr6	-	6716	9	FSM	ENSMUSG00000037172.15	ENSMUST00000101492.10	6742	9	19	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGCCTGTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	40413050	40378315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388679_40395425_40395580_40399659_40399819_40400657_40400758_40412791
ENSMUSG00000037172.15_1	chr6	-	1475	8	FSM	ENSMUSG00000037172.15	ENST00000482493.1	1489	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTCCACCAAGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	40400750	40383251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388640_40395425_40395580_40399659_40399819_40400657
ENSMUSG00000037172.15_2	chr6	-	1385	7	ISM	ENSMUSG00000037172.15	ENST00000482493.1	1489	8	934	9	934	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTTTCCACCAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	40399824	40383254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_40383869_40385202_40385272_40385992_40386144_40386275_40386408_40388539_40388640_40395425_40395580_40399659
ENSMUSG00000037174.19_0	chr3	-	5909	10	FSM	ENSMUSG00000037174.19	ENSMUST00000194641.6	5919	10	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACACCATTGTGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	51248078	51160144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ENSMUSG00000037174.19_1	chr3	-	3334	10	FSM	ENSMUSG00000037174.19	ENSMUST00000062009.14	3353	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTATCTTGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	51248052	51162657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51215470_51215637_51230642_51230873_51233368_51233457_51247834
ENSMUSG00000037174.19_10	chr3	-	2567	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108053.9	2611	7	29	15	29	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTAAAAATCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	51184967	51163100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172464_51174173_51174288_51184625
ENSMUSG00000037174.19_11	chr3	-	2492	7	FSM	ENSMUSG00000037174.19	ENSMUST00000108051.8	2514	7	2	20	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAATTTTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	51184933	51163105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51164407_51164845_51165197_51166592_51166786_51168419_51168507_51172289_51172428_51174173_51174288_51184625
ENSMUSG00000037174.19_14	chr3	-	2133	2	FSM	ENSMUSG00000037174.19	ENSMUST00000195432.2	2161	2	8	20	8	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCAATGAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51184781	51172310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51174288_51184625
ENSMUSG00000037185.10_0	chr15	-	3046	9	FSM	ENSMUSG00000037185.10	ENSMUST00000077196.6	3067	9	9	12	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGATAATGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	101268034	101246207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101247921_101248049_101248106_101248876_101249098_101249554_101249681_101250057_101250223_101256527_101256624_101257360_101257422_101262090_101262300_101267635
ENSMUSG00000037190.13_0	chr9	-	1777	3	FSM	ENSMUSG00000037190.13	ENSMUST00000041459.9	1786	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGCTATGCCTTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	107419059	107416209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107417585_107418201_107418240_107418695
ENSMUSG00000037190.13_1	chr9	-	1137	4	FSM	ENSMUSG00000037190.13	ENSMUST00000195235.6	1162	4	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCTGAAAACCTGTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	107419378	107416784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107417585_107418201_107418240_107418695_107418850_107419233
ENSMUSG00000037196.7_0	chr17	-	1346	6	FSM	ENSMUSG00000037196.7	ENST00000337019.7	1365	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCATCACTACAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	11058869	10621849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10622408_10742659_10742769_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ENSMUSG00000037196.7_6	chr17	-	1458	5	FSM	ENSMUSG00000037196.7	ENSMUST00000041463.7	1475	5	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCAATTCACCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	11059186	10621945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10622408_10795393_10795544_10815996_10816169_10996021_10996157_11058647
ENSMUSG00000037197.12_0	chr2	-	1578	12	FSM	ENSMUSG00000037197.12	ENSMUST00000040314.12	1599	12	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATCTGTGTGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	11608061	11590256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_11590540_11590644_11590718_11591677_11591777_11592531_11592606_11593738_11593903_11595499_11595642_11598218_11598276_11600141_11600240_11601439_11601607_11602862_11602980_11605429_11605568_11607895
ENSMUSG00000037204.8_0	chr15	+	1259	3	FSM	ENSMUSG00000037204.8	ENSMUST00000048393.8	1270	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCTTGGCCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	101182162	101188825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101182427_101184813_101185132_101188148
ENSMUSG00000037206.16_0	chr9	-	2193	2	FSM	ENSMUSG00000037206.16	ENSMUST00000041477.15	2223	2	10	20	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	58066494	58063570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58065514_58066244
ENSMUSG00000037206.16_1	chr9	-	2044	2	FSM	ENSMUSG00000037206.16	ENSMUST00000168864.4	2076	2	10	22	10	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	3310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	58065818	58063578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_58065514_58065709
ENSMUSG00000037210.17_1	chr5	+	5524	21	FSM	ENSMUSG00000037210.17	ENST00000637812.2	5545	21	12	9	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCAGGAGACCCAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	34527283	34643791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34527772_34567924_34568172_34577344_34577500_34578127_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ENSMUSG00000037210.17_12	chr5	+	4003	18	FSM	ENSMUSG00000037210.17	ENST00000502458.5	4018	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGATGTGTGGGAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34578136	34643106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34578296_34583610_34583846_34588475_34588601_34593794_34594012_34596654_34596733_34597464_34597578_34597691_34597935_34600650_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34633069_34633152_34642997
ENSMUSG00000037210.17_16	chr5	+	4724	18	FSM	ENSMUSG00000037210.17	ENST00000324666.9	4745	18	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATTAGTACAGCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	34578137	34643781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34578296_34583610_34583846_34588475_34588601_34593794_34593943_34596654_34596733_34597464_34597578_34597691_34597935_34600644_34600799_34600922_34601103_34602005_34602258_34615248_34615448_34616341_34616633_34618438_34618722_34619427_34619612_34621317_34621549_34622917_34623792_34632959_34633152_34642997
ENSMUSG00000037211.13_0	chr3	+	2750	2	FSM	ENSMUSG00000037211.13	ENSMUST00000108107.2	2773	2	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGCTCTCGAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	37694243	37698739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37694958_37696703
ENSMUSG00000037214.13_0	chr8	+	2278	3	FSM	ENSMUSG00000037214.13	ENSMUST00000036807.13	2295	3	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATCTTGTGGCCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	26648181	26654175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26648550_26650802_26650999_26652461
ENSMUSG00000037216.6_0	chr1	+	1469	2	FSM	ENSMUSG00000037216.6	ENSMUST00000041621.5	1485	2	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGAAACTGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	37911292	37915299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_37911407_37913944
ENSMUSG00000037217.16_0	chrX	-	3191	13	FSM	ENSMUSG00000037217.16	ENSMUST00000081893.7	3209	13	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGAATTCTGTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	20787142	20726756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20727849_20728737_20729330_20729421_20729510_20729822_20729970_20730999_20731103_20731193_20731269_20731357_20731501_20732084_20732148_20773315_20773406_20774189_20774347_20775575_20775668_20775763_20775822_20786651
ENSMUSG00000037221.14_0	chr5	-	1440	6	FSM	ENSMUSG00000037221.14	ENSMUST00000037620.14	1456	6	2	14	2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTAAAAATCAAAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137599304	137594920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532_137598806_137599003
ENSMUSG00000037221.14_1	chr5	-	1293	5	FSM	ENSMUSG00000037221.14	ENSMUST00000111007.8	1318	5	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCAAAATGAGAAACG	NA	NA	NA	NA	NA	NA	NA	NA	137598956	137594917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137595316_137595412_137595578_137597855_137598086_137598238_137598315_137598532
ENSMUSG00000037225.14_0	chr3	+	5972	3	FSM	ENSMUSG00000037225.14	ENSMUST00000200585.5	5973	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTCTTTGTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	37402801	37464256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37403174_37450333_37450438_37458760
ENSMUSG00000037234.18_0	chr8	-	12817	22	FSM	ENSMUSG00000037234.18	ENSMUST00000037182.14	12836	22	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCCAGTATAGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	26609245	26511460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26522059_26524958_26525031_26525160_26525266_26528049_26528151_26529696_26529780_26534267_26534303_26538279_26538368_26549267_26549409_26551404_26551475_26557877_26557966_26558586_26558698_26560101_26560304_26561085_26561227_26562284_26562449_26563627_26563712_26564895_26564959_26572541_26572610_26578087_26578221_26583684_26583736_26585785_26585859_26600763_26600850_26608985
ENSMUSG00000037235.14_0	chr5	-	3852	6	FSM	ENSMUSG00000037235.14	ENSMUST00000042701.13	3872	6	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTCATTTTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	34345042	34331238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34334494_34334941_34335105_34336153_34336269_34341657_34341688_34344672_34344773_34344853
ENSMUSG00000037236.17_1	chr18	+	2912	16	FSM	ENSMUSG00000117694.2	ENST00000509990.5	2932	16	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGTACAAGAAGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	35686424	35723481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35686557_35690389_35690450_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_28	chr18	+	6241	15	FSM	ENSMUSG00000037236.17	ENSMUST00000166793.10	6262	15	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAATTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35695220	35726877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35721384_35721507_35723432
ENSMUSG00000037236.17_47	chr18	+	3022	14	FSM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAATAAAGAACAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	35695273	35723833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35695346_35704895_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ENSMUSG00000037236.17_66	chr18	+	2951	13	ISM	ENSMUSG00000037236.17	ENST00000510056.5	3032	14	9623	8	9389	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAATAAAGAACAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	35704894	35723833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_35705989_35710610_35710673_35711468_35711511_35711957_35712071_35712318_35712372_35714222_35714349_35714649_35714776_35714971_35715140_35715768_35715901_35716930_35716975_35717567_35717935_35720683_35720907_35723432
ENSMUSG00000037239.9_0	chr7	-	4041	6	FSM	ENSMUSG00000037239.9	ENSMUST00000048923.7	4056	6	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCGCCTGGTCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	28868057	28858253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28861620_28862283_28862419_28865782_28865860_28865951_28866121_28867217_28867399_28867944
ENSMUSG00000037242.9_0	chr4	-	4101	6	FSM	ENSMUSG00000037242.9	ENSMUST00000037099.9	4119	6	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATCAAAGGATTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135000116	134941288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134944577_134945818_134946001_134950774_134950882_134953334_134953461_134966172_134966283_134999828
ENSMUSG00000037243.18_0	chr11	+	1878	12	FSM	ENSMUSG00000037243.18	ENSMUST00000153510.9	1887	12	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGTGTATGCTTTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	58197894	58205430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58198083_58198399_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUSG00000037243.18_4	chr11	+	1855	12	FSM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATATAAGAATCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58198000	58205451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58198083_58198337_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUSG00000037243.18_6	chr11	+	1777	11	ISM	ENSMUSG00000037243.18	ENSMUST00000049353.9	1860	12	336	2	336	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGATATAAGAATCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	58198333	58205451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_58198588_58198798_58198831_58199620_58199885_58200217_58200267_58200353_58200492_58200779_58200999_58201081_58201160_58201243_58201323_58202281_58202397_58204791_58204892_58205002
ENSMUSG00000037251.6_0	chr8	-	3607	5	FSM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCATTTAATGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	26484161	26470637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677_26479770_26484114
ENSMUSG00000037251.6_1	chr8	-	3551	4	ISM	ENSMUSG00000037251.6	ENSMUST00000061850.5	3613	5	4401	6	4401	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCATTTAATGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	26479760	26470637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_26473673_26476273_26476561_26477522_26477669_26479677
ENSMUSG00000037253.9_0	chr18	+	3723	2	FSM	ENSMUSG00000037253.9	ENSMUST00000091852.5	3738	2	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGAATGTATTCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	73706121	73725638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_73706848_73722641
ENSMUSG00000037257.9_0	chr9	+	5280	10	FSM	ENSMUSG00000037257.9	ENSMUST00000041551.9	5294	10	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGGTAAGTGGAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	63509949	63551864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_63510054_63523967_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543665_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037257.9_3	chr9	+	783	8	FSM	ENSMUSG00000037257.9	ENST00000542650.5	801	8	8	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAGGTGAGACGACCCG	NA	NA	NA	NA	NA	NA	NA	NA	63523974	63546917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874
ENSMUSG00000037257.9_8	chr9	+	883	9	FSM	ENSMUSG00000037257.9	ENST00000261880.10	896	9	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACTCCAGTGCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	63523978	63547585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_63524159_63524269_63524367_63524789_63524880_63526429_63526514_63542586_63542670_63543668_63543766_63546321_63546427_63546874_63546925_63547488
ENSMUSG00000037259.16_41	chr2	-	1136	10	FSM	ENSMUSG00000037259.16	ENST00000329494.9	1149	10	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGTAAGTGAACCGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	144344942	144320937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144343346_144343440_144344837
ENSMUSG00000037259.16_8	chr2	-	2329	17	ISM	ENSMUSG00000037259.16	ENST00000357236.8	2355	18	9	5227	9	4099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGCTGCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	144353928	144316834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_144317010_144317992_144318068_144320934_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330749_144332032_144332198_144333691_144333815_144343346_144343440_144344837_144344952_144346259_144346378_144348078_144348165_144352087_144352156_144353410
ENSMUSG00000037259.16_9	chr2	-	2265	20	ISM	ENSMUSG00000037259.16	ENST00000358866.10	2293	21	11	5227	11	4099	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGGAGGCTGCAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	144367605	144316834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_144317010_144317992_144318068_144320934_144321063_144321524_144321606_144323554_144323656_144324050_144324148_144325276_144325352_144326531_144326636_144330540_144330731_144332032_144332198_144333691_144333815_144343346_144343440_144344837_144344952_144346259_144346378_144348078_144348165_144352087_144352156_144353410_144353508_144355315_144355431_144364332_144364487_144367499
ENSMUSG00000037260.9_0	chr8	-	2683	18	FSM	ENSMUSG00000037260.9	ENSMUST00000037609.8	2694	18	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACTCTCGTTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	26466776	26434486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26435344_26436263_26436377_26436474_26436546_26437961_26438040_26441996_26442084_26443308_26443436_26444633_26444756_26445701_26445818_26447217_26447379_26449610_26449642_26450853_26450931_26453382_26453487_26454821_26454892_26458390_26458461_26461074_26461197_26461593_26461731_26462869_26462986_26466552
ENSMUSG00000037262.8_0	chr2	+	1453	5	FSM	ENSMUSG00000037262.8	ENSMUST00000042512.8	1472	5	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAGCAATTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	10085440	10097604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096528
ENSMUSG00000037262.8_1	chr2	+	1461	5	NNC	ENSMUSG00000037262.8	novel	1472	5	NA	NA	3	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATTCTTAAAGACACAG	NA	NA	NA	NA	NA	NA	NA	NA	10085437	10097610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_10085556_10090540_10090636_10094923_10094968_10095051_10095175_10096529
ENSMUSG00000037266.19_0	chr4	+	1732	5	FSM	ENSMUSG00000037266.19	ENSMUST00000078084.7	1749	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGCATTAGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134650911	134654974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134651079_134651185_134651794_134652603_134652744_134654045_134654130_134654241
ENSMUSG00000037266.19_3	chr4	+	1122	4	FSM	ENSMUSG00000037266.19	ENST00000243189.12	1149	4	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACACAGTTGTACACTG	NA	NA	NA	NA	NA	NA	NA	NA	134651268	134654620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134651794_134652603_134652738_134654045_134654130_134654241
ENSMUSG00000037270.19_1	chr3	+	15843	86	FSM	ENSMUSG00000037270.19	ENSMUST00000057272.15	15883	86	38	2	38	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTGTCTCATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36917292	37107180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36917498_36918535_36918635_36924146_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267_36997519_37000396_37000656_37001889_37002728_37003290_37003362_37004034_37004209_37006266_37006388_37007985_37008133_37010787_37010916_37011118_37011319_37012836_37013035_37013485_37013698_37019023_37019176_37019669_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37046825_37046877_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084898_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ENSMUSG00000037270.19_16	chr3	+	15506	84	FSM	ENSMUSG00000037270.19	ENSMUST00000152564.8	15541	84	33	2	33	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCTTTGTCTCATTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	36924179	37107180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267_36997519_37000396_37000656_37001889_37002728_37003290_37003362_37004034_37004209_37006266_37006388_37007985_37008133_37010787_37010916_37011118_37011319_37012836_37013035_37013485_37013698_37019023_37019176_37019669_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37046825_37046877_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084898_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ENSMUSG00000037270.19_5	chr3	+	15754	86	FSM	ENSMUSG00000037270.19	ENST00000679879.1	15781	86	14	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCACAATAACGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36924159	37107144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_36924274_36928346_36928464_36929598_36929678_36931822_36931888_36939505_36939693_36941367_36941450_36941823_36942018_36943971_36944052_36944943_36945095_36949407_36949565_36949954_36950034_36960839_36960932_36962280_36962399_36971766_36971923_36972600_36972699_36974003_36974183_36974328_36974436_36975367_36975577_36982583_36982812_36985146_36985285_36991137_36991318_36992594_36992724_36994901_36995022_36996331_36996613_36997267_36997519_37000396_37000656_37001889_37002728_37003290_37003362_37004034_37004209_37006266_37006388_37007985_37008133_37010787_37010916_37011118_37011319_37012836_37013035_37013485_37013698_37019023_37019176_37019669_37019821_37019990_37020144_37021258_37021500_37023294_37023438_37027379_37027600_37028316_37028476_37029735_37029912_37037517_37037694_37041119_37041827_37042218_37042465_37043943_37044038_37046825_37046877_37048923_37049131_37050463_37050703_37052338_37052584_37054164_37054271_37056718_37056817_37057897_37058084_37058987_37059157_37061133_37061346_37062542_37062742_37065093_37065154_37065716_37065944_37066633_37066835_37067028_37067160_37068553_37068678_37075595_37075706_37076532_37076624_37077118_37077182_37080238_37080493_37082188_37082405_37084049_37084231_37084695_37084898_37086513_37086676_37087410_37087551_37088701_37088904_37089925_37090127_37090805_37090986_37092673_37092812_37093428_37093687_37094469_37094621_37095150_37095309_37095436_37095630_37095852_37096071_37098729_37098982_37100382_37100587_37102114_37102310_37102662_37102798_37104911_37105078_37106472
ENSMUSG00000037275.15_1	chr11	-	6204	28	FSM	ENSMUSG00000037275.15	ENSMUST00000172035.8	6213	28	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCTCTTTTCTTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	58059356	58010827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58012611_58013107_58013205_58015757_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028593_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUSG00000037275.15_11	chr11	-	4474	28	FSM	ENSMUSG00000037275.15	ENST00000285873.8	4488	28	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCGGCACACGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	58059260	58012459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58012611_58013107_58013202_58015753_58016245_58017257_58017421_58019470_58019726_58020843_58021055_58021468_58021589_58025589_58025738_58027683_58027822_58028493_58028590_58029844_58029968_58030320_58030435_58032413_58032636_58036174_58036347_58037218_58037359_58038652_58038835_58039240_58039315_58041371_58041509_58042357_58042441_58045927_58046014_58046457_58046671_58047492_58047659_58051531_58051665_58054619_58054740_58055082_58055235_58056718_58056901_58058534_58058696_58059113
ENSMUSG00000037278.10_0	chr11	-	1364	3	FSM	ENSMUSG00000037278.10	ENSMUST00000103242.5	1375	3	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGGTTTGTTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78441593	78432643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78433623_78434311_78434457_78441353
ENSMUSG00000037286.16_0	chr9	+	6168	34	FSM	ENSMUSG00000037286.16	ENSMUST00000129269.8	6186	34	8	10	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAATCAGCCTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	100525508	100840588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037286.16_2	chr9	+	5878	33	FSM	ENSMUSG00000037286.16	ENSMUST00000041418.13	5909	33	17	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTCAAAATCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	100525682	100840583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620196_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037286.16_3	chr9	+	4262	34	FSM	ENSMUSG00000037286.16	ENST00000629124.2	4276	34	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGACAGAGCAGCATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100525676	100838756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100525850_100587205_100587308_100594490_100594594_100620030_100620290_100639742_100639840_100658808_100658886_100668544_100668750_100678756_100678909_100685333_100685408_100716470_100716595_100727068_100727168_100730711_100730792_100737849_100737958_100748152_100748268_100762828_100762947_100769432_100769537_100769882_100769976_100770074_100770165_100770298_100770503_100771613_100771685_100773101_100773190_100790689_100790771_100810075_100810169_100811893_100812069_100813639_100813780_100824690_100824793_100826821_100826971_100827908_100828038_100829134_100829341_100833659_100833835_100835538_100835650_100836273_100836389_100838421_100838503_100838587
ENSMUSG00000037287.16_0	chr9	-	4965	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066148.12	5000	8	30	5	-10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACTCCTTGTGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	42383524	42323616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42383361
ENSMUSG00000037287.16_1	chr9	-	3857	8	FSM	ENSMUSG00000037287.16	ENSMUST00000066179.14	3893	8	32	4	32	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTTATAACCAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	42372725	42324717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42327446_42348410_42348528_42350392_42350520_42354114_42354372_42355702_42355885_42361219_42361360_42362908_42363059_42372569
ENSMUSG00000037295.8_0	chr4	-	6530	9	FSM	ENSMUSG00000037295.8	ENSMUST00000037828.8	6549	9	13	6	-10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGTGTGTGTGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	134495322	134468870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134474511_134475592_134475628_134476647_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUSG00000037295.8_6	chr4	-	2155	8	FSM	ENSMUSG00000037295.8	ENST00000374338.5	2170	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGGTATCTCACTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	134495301	134473226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134474544_134476643_134476779_134477269_134477354_134477692_134477766_134482503_134482619_134484651_134484765_134486229_134486373_134495126
ENSMUSG00000037296.8_0	chr8	+	2644	4	FSM	ENSMUSG00000037296.8	ENSMUST00000038421.8	2663	4	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAGAAAATGTAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	26275320	26293989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26275746_26282184_26282254_26283704_26283821_26291955
ENSMUSG00000037300.20_0	chr8	-	3129	21	FSM	ENSMUSG00000037300.20	ENSMUST00000118134.3	3148	21	13	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAAACCGTGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	125448709	125398079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037300.20_1	chr8	-	2883	19	FSM	ENSMUSG00000037300.20	ENSMUST00000231984.2	2905	19	13	9	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAAACCGTGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	125448694	125398079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037300.20_17	chr8	-	2889	23	FSM	ENSMUSG00000037300.20	ENST00000366661.9	2911	23	10	12	-2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAACAACCAACAGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	125448713	125398486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403190_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448471
ENSMUSG00000037300.20_18	chr8	-	2726	21	FSM	ENSMUSG00000037300.20	ENST00000366662.8	2749	21	12	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCAACAGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	125448711	125398485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125436641_125436713_125439355_125439432_125440927_125441023_125448471
ENSMUSG00000037300.20_2	chr8	-	3285	23	FSM	ENSMUSG00000037300.20	ENSMUST00000214828.2	3301	23	8	8	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAAACCGTGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	125448709	125398079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125398937_125400186_125400267_125400395_125400475_125401100_125401181_125401960_125402097_125403079_125403187_125405740_125405826_125406726_125406811_125408805_125408899_125409921_125410055_125410495_125410627_125411216_125411374_125415269_125415445_125415595_125415738_125417015_125417099_125421568_125421680_125422374_125422492_125424732_125424826_125426394_125426461_125436641_125436713_125439355_125439432_125440927_125441023_125448475
ENSMUSG00000037306.14_0	chr4	-	4694	12	FSM	ENSMUSG00000037306.14	ENSMUST00000054096.13	4715	12	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCCTGGCTGTATAGT	NA	NA	NA	NA	NA	NA	NA	NA	134431584	134289004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255
ENSMUSG00000037306.14_1	chr4	-	4276	13	FSM	ENSMUSG00000037306.14	ENSMUST00000038628.4	4285	13	2	7	2	-7	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCTTCCTGGCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	134431599	134289007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134291144_134291815_134291932_134293138_134293312_134296206_134296427_134303250_134303367_134305596_134305691_134308081_134308200_134311610_134311706_134318666_134318748_134320560_134320677_134367597_134367695_134430255_134431078_134431507
ENSMUSG00000037313.17_0	chr5	+	2648	15	FSM	ENSMUSG00000037313.17	ENSMUST00000074849.13	2669	15	14	7	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTCAACCCAGGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	33815485	33829538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824386_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_11	chr5	+	2167	15	FSM	ENSMUSG00000037313.17	ENSMUST00000114426.10	2187	15	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTCAAAGTCAACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	33815940	33829533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325
ENSMUSG00000037313.17_3	chr5	+	2883	16	FSM	ENSMUSG00000037313.17	ENSMUST00000079534.11	2899	16	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATATATCACTCCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	33815486	33836338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33816072_33818565_33818729_33818864_33818990_33821164_33821247_33821610_33822200_33824036_33824090_33824407_33824512_33825306_33825398_33825477_33825580_33826005_33826083_33826161_33826206_33826821_33826992_33828747_33828855_33829008_33829130_33829325_33829421_33835963
ENSMUSG00000037315.16_0	chrX	+	4568	11	FSM	ENSMUSG00000037315.16	ENST00000611250.4	4578	11	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACTGTTAACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20291592	20386164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20291651_20326754_20326810_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ENSMUSG00000037315.16_3	chrX	+	4510	10	ISM	ENSMUSG00000037315.16	ENST00000611250.4	4578	11	35162	10	-11	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAACTGTTAACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	20326754	20386164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_20326810_20328350_20328431_20345752_20345911_20355940_20356132_20360395_20360608_20365664_20365833_20368634_20368752_20377258_20377730_20378974_20379093_20383224
ENSMUSG00000037316.10_0	chr8	-	4861	5	FSM	ENSMUSG00000037316.10	ENSMUST00000038498.10	4876	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAAACAGCTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	26275308	26254573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26258438_26259309_26259565_26261106_26261362_26267450_26267556_26274926
ENSMUSG00000037318.11_0	chr1	-	2111	16	FSM	ENSMUSG00000037318.11	ENSMUST00000043550.11	2122	16	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGACTACTCTTTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	192883853	192857820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192858068_192860471_192860609_192861800_192861858_192863613_192863677_192864189_192864326_192866774_192866913_192867101_192867243_192869406_192869479_192876596_192876693_192876827_192876858_192877132_192877158_192877380_192877445_192877582_192877731_192879985_192880386_192883200_192883307_192883602
ENSMUSG00000037321.18_0	chr17	+	2942	11	FSM	ENSMUSG00000037321.18	ENSMUST00000170086.8	2953	11	5	6	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTGGCTTCTCCCGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	34406531	34416193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34407380_34408151_34408267_34408403_34408535_34409536_34409743_34410302_34410501_34411810_34411940_34412101_34412291_34412458_34412633_34412854_34413018_34413817_34413955_34415541
ENSMUSG00000037325.11_1	chr3	-	2658	19	FSM	ENSMUSG00000037325.11	ENSMUST00000108156.9	2687	19	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAATATACTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	36667606	36627299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648710_36652414_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714_36664778_36666160_36666227_36667398
ENSMUSG00000037325.11_19	chr3	-	1913	16	FSM	ENSMUSG00000037325.11	ENST00000506636.1	1923	16	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGACCAGAAAAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36664778	36629439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714
ENSMUSG00000037325.11_20	chr3	-	1845	15	ISM	ENSMUSG00000037325.11	ENST00000506636.1	1923	16	279	9	279	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGACCAGAAAAGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36664500	36629439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328
ENSMUSG00000037325.11_5	chr3	-	2046	17	FSM	ENSMUSG00000037325.11	ENST00000264499.9	2060	17	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAGGTAGGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	36664777	36627634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328_36664505_36664714
ENSMUSG00000037325.11_6	chr3	-	1978	16	ISM	ENSMUSG00000037325.11	ENST00000264499.9	2060	17	280	12	280	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAACAAGGTAGGCCAACA	NA	NA	NA	NA	NA	NA	NA	NA	36664499	36627634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_36627772_36629442_36629567_36629693_36629798_36629891_36630002_36632544_36632710_36636774_36636915_36644800_36644867_36646513_36646589_36648516_36648699_36652406_36652518_36653487_36653573_36656977_36657109_36658554_36658672_36659832_36659906_36661669_36661857_36664328
ENSMUSG00000037326.11_0	chr17	-	4553	12	FSM	ENSMUSG00000037326.11	ENSMUST00000212149.2	4555	12	0	2	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	26198867	26177342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26178708_26178780_26178960_26179038_26179206_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000_26184502_26198811
ENSMUSG00000037326.11_1	chr17	-	4482	11	ISM	ENSMUSG00000037326.11	ENSMUST00000212149.2	4555	12	14381	2	14381	1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGCTTGCATTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	26184486	26177342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_26178708_26178780_26178960_26179038_26179206_26179310_26179538_26179623_26179786_26180693_26180847_26180927_26181054_26181644_26181869_26181935_26182120_26182220_26182430_26183000
ENSMUSG00000037331.16_0	chr11	+	6595	19	FSM	ENSMUSG00000037331.16	ENSMUST00000071487.13	6614	19	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCAAAACACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57899900	57952849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932483_57933059_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ENSMUSG00000037331.16_1	chr11	+	6596	19	FSM	ENSMUSG00000037331.16	ENSMUST00000178636.2	6617	19	10	11	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGCAAAACACTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57899899	57952849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_57900374_57931216_57931279_57931515_57931582_57932303_57932479_57933055_57933185_57933261_57933469_57933569_57933733_57934731_57934877_57938520_57938696_57938802_57938973_57940522_57940916_57941608_57941733_57941827_57942034_57942450_57942558_57943405_57943558_57946292_57946438_57947879_57947990_57948086_57948215_57949384
ENSMUSG00000037339.18_0	chr5	-	1993	6	FSM	ENSMUSG00000037339.18	ENSMUST00000065119.15	2009	6	9	7	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCCTAGATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	33786970	33757697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196_33786322_33786680
ENSMUSG00000037339.18_7	chr5	-	2339	5	FSM	ENSMUSG00000037339.18	ENSMUST00000045329.10	2346	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTCTGCCTAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	33786959	33757699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33758225_33764807_33765572_33767775_33767831_33771946_33772179_33786196
ENSMUSG00000037343.9_0	chr15	-	5017	26	NNC	ENSMUSG00000037343.9	novel	5031	26	NA	NA	8	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGGACAGTCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54935540	54878534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_-_54879998_54885597_54885721_54890567_54890674_54891713_54891944_54894441_54894552_54897558_54897629_54899913_54900054_54901634_54901829_54903758_54903870_54906504_54906646_54909131_54909385_54910813_54910880_54911621_54911732_54912022_54912138_54912790_54912946_54915511_54915648_54917629_54917716_54919182_54919283_54922194_54922309_54923298_54923484_54925448_54925681_54926388_54926531_54927983_54928103_54929255_54929417_54934788_54934842_54935238
ENSMUSG00000037344.15_0	chr5	-	3296	14	FSM	ENSMUSG00000037344.15	ENSMUST00000039991.14	3330	14	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTATGGGCTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	137331833	137312827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137314100_137319655_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137329204_137329337_137330387_137330523_137330717_137330941_137331709
ENSMUSG00000037344.15_1	chr5	-	1612	10	FSM	ENSMUSG00000037344.15	ENST00000415287.5	1626	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGTCTTGGTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	137330932	137319668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137319803_137320657_137320833_137320977_137321171_137321308_137321434_137323584_137323668_137323778_137323937_137325632_137325745_137325858_137325967_137326698_137327008_137330717
ENSMUSG00000037347.8_0	chrX	+	2197	2	FSM	ENSMUSG00000037347.8	ENSMUST00000044138.8	2206	2	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTCTATCTAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	19925804	19963757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_19927448_19963203
ENSMUSG00000037348.16_0	chr4	+	2340	2	FSM	ENSMUSG00000037348.16	ENSMUST00000081525.4	2351	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGTTTTGACTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	134224018	134236124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134224348_134234113
ENSMUSG00000037348.16_1	chr4	+	3546	3	FSM	ENSMUSG00000037348.16	ENSMUST00000095074.4	3550	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAATTCCTTGATTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	134224314	134237542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134224348_134227910_134227995_134234113
ENSMUSG00000037348.16_2	chr4	+	3497	2	ISM	ENSMUSG00000037348.16	ENSMUST00000095074.4	3550	3	3609	7	3609	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCAATTCCTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	134227923	134237539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_134227995_134234113
ENSMUSG00000037349.10_0	chr19	-	999	6	FSM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6973405	6970386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973375
ENSMUSG00000037349.10_1	chr19	-	956	5	ISM	ENSMUSG00000037349.10	ENSMUST00000041686.10	1000	6	315	1	315	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6973090	6970386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609
ENSMUSG00000037349.10_2	chr19	-	1064	6	FSM	ENSMUSG00000037349.10	ENSMUST00000180765.2	1073	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCGTTAGCTTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	6973477	6970386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6970571_6970800_6970895_6971029_6971128_6972038_6972138_6972609_6973104_6973382
ENSMUSG00000037351.10_0	chr1	-	3228	11	FSM	ENSMUSG00000037351.10	ENSMUST00000043951.10	3248	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTCCTTATGAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36749076	36737201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36739260_36739417_36739459_36739616_36739679_36740214_36740390_36740501_36740595_36740765_36740983_36741139_36741265_36741555_36741682_36745950_36746027_36747271_36747337_36748886
ENSMUSG00000037353.10_0	chr15	+	2483	9	FSM	ENSMUSG00000037353.10	ENSMUST00000037001.10	2502	9	13	6	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTCTGGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	100366916	100377039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100367127_100367565_100367718_100369540_100369657_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037353.10_3	chr15	+	2247	8	FSM	ENSMUSG00000037353.10	ENSMUST00000230294.2	2266	8	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTTTCTGGGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	100366929	100377039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100367020_100367565_100367718_100370429_100370513_100372903_100373091_100373186_100373289_100373382_100373536_100374670_100374768_100375656
ENSMUSG00000037355.15_0	chr5	+	7321	14	FSM	ENSMUSG00000037355.15	ENSMUST00000087864.12	7326	14	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGCTGTTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	33536043	33577097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33536347_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
ENSMUSG00000037355.15_2	chr5	+	7160	14	FSM	ENSMUSG00000037355.15	ENSMUST00000202816.2	7165	14	4	1	4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTGCTGTTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	33536119	33577097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33536262_33536569_33536670_33544999_33545331_33546059_33546181_33546985_33547382_33549087_33549201_33549399_33549529_33559837_33559944_33566152_33566325_33566770_33566894_33568202_33568387_33568904_33569017_33571242_33571418_33572141
ENSMUSG00000037361.9_0	chr12	+	1162	4	FSM	ENSMUSG00000037361.9	ENSMUST00000046207.9	1180	4	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACACTGACTTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4867551	4877649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4867820_4870593_4870713_4876757_4876897_4877013
ENSMUSG00000037362.9_0	chr15	+	2123	5	FSM	ENSMUSG00000037362.9	ENST00000259526.4	2146	5	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATTAAATATGACATCA	NA	NA	NA	NA	NA	NA	NA	NA	54609637	54617148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_54609794_54611158_54611420_54612545_54612761_54615604_54616316_54616368
ENSMUSG00000037363.10_10	chr8	-	1065	6	ISM	ENSMUSG00000037363.10	ENST00000523983.6	1135	7	2328	5	2328	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACTTCCACCGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	26084106	26071712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734
ENSMUSG00000037363.10_2	chr8	-	1129	7	FSM	ENSMUSG00000037363.10	ENST00000523983.6	1135	7	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACTTCCACCGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	26086433	26071712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26082467_26082612_26083734_26084115_26086377
ENSMUSG00000037363.10_3	chr8	-	986	6	FSM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACTTCCACCGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	26086434	26071712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26083734_26084115_26086377
ENSMUSG00000037363.10_4	chr8	-	923	5	ISM	ENSMUSG00000037363.10	ENST00000297720.9	991	6	2326	5	2326	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACTTCCACCGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	26084108	26071712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_26071803_26075364_26075485_26076622_26076824_26077311_26077450_26083734
ENSMUSG00000037364.13_0	chr5	-	3007	20	FSM	ENSMUSG00000037364.13	ENSMUST00000040873.12	3024	20	10	7	2	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137305926	137293972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137294169_137294248_137294376_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037364.13_11	chr5	-	2972	20	FSM	ENSMUSG00000037364.13	ENSMUST00000199243.5	2988	20	16	0	16	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGCTGTATGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	137305912	137293972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137294169_137294248_137294355_137294479_137294582_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037364.13_26	chr5	-	2960	20	FSM	ENSMUSG00000037364.13	ENSMUST00000197466.5	2972	20	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAACTGTGTGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	137305916	137293976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137294169_137294248_137294355_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298015_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307_137305448_137305685
ENSMUSG00000037364.13_31	chr5	-	2639	19	FSM	ENSMUSG00000037364.13	ENST00000618262.4	2650	19	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATGTCCCCTCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	137305442	137294089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137294169_137294248_137294376_137294479_137294570_137294728_137294886_137295036_137295231_137295340_137295495_137295601_137295776_137296060_137296250_137296489_137296569_137296652_137296715_137296987_137297146_137297819_137297935_137298008_137298115_137298228_137298414_137298505_137298676_137300387_137300577_137300788_137300936_137301173_137301303_137305307
ENSMUSG00000037366.15_0	chr4	+	2240	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105869.9	2248	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGAAACTATTAACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	134123638	134153803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134123736_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ENSMUSG00000037366.15_1	chr4	+	3160	11	FSM	ENSMUSG00000037366.15	ENSMUST00000105870.8	3180	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTCGCTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	134124794	134154717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134124898_134130280_134130416_134131403_134131555_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688_134149844_134152783
ENSMUSG00000037366.15_2	chr4	+	1128	9	FSM	ENSMUSG00000037366.15	ENST00000374284.5	1150	9	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACCTTGGTAAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	134130259	134149833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134130416_134131403_134131549_134132316_134132414_134138214_134138284_134139077_134139217_134140652_134140767_134145352_134145445_134147179_134147351_134149688
ENSMUSG00000037369.18_0	chrX	+	5760	29	FSM	ENSMUSG00000037369.18	ENST00000382899.9	5786	29	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTACAGACAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	18028890	18146073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_17	chrX	+	5604	28	FSM	ENSMUSG00000037369.18	ENST00000536777.6	5630	28	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTACAGACAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	18028890	18146073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_29	chrX	+	5497	27	FSM	ENSMUSG00000037369.18	ENST00000543216.6	5528	27	14	17	14	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTACAGACAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	18028895	18146073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18114508_18114599_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037369.18_40	chrX	+	6085	30	FSM	ENSMUSG00000037369.18	ENST00000611820.5	6103	30	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAGGCAATTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	18028892	18146265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_18029412_18029622_18029687_18065396_18065506_18074974_18075025_18083176_18083236_18088995_18089117_18100098_18100154_18102899_18102935_18105079_18105174_18107940_18108068_18112204_18112304_18112435_18112656_18113213_18113349_18113805_18113962_18114508_18114599_18115991_18116094_18116945_18117342_18120242_18121022_18124074_18124205_18127761_18127868_18128468_18128675_18130186_18130252_18130324_18130400_18130800_18130950_18135386_18135502_18138083_18138272_18139186_18139329_18141273_18141401_18143614_18143786_18144864
ENSMUSG00000037370.14_0	chr10	-	6762	25	FSM	ENSMUSG00000037370.14	ENSMUST00000105520.8	6777	25	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATATTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	24588047	24513817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24533736_24533769_24536047_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906_24545017_24545577_24545698_24545840_24545921_24547912_24548011_24550512_24550574_24551875_24552002_24553810_24553928_24555085_24555159_24587703
ENSMUSG00000037370.14_7	chr10	-	2829	24	FSM	ENSMUSG00000037370.14	ENST00000647893.1	2843	24	5	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTACAACTGGGACTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	24587886	24517586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_24517875_24521175_24521339_24523050_24523184_24523914_24523996_24525141_24525272_24527142_24527295_24528732_24528785_24529800_24529968_24530785_24530874_24531700_24531771_24533002_24533131_24536018_24536180_24537764_24537874_24540452_24540526_24540808_24540875_24544906_24545017_24545577_24545698_24545840_24545921_24547912_24548011_24550512_24550574_24551875_24552002_24553810_24553928_24555085_24555159_24587703
ENSMUSG00000037373.13_0	chr5	-	2266	9	FSM	ENSMUSG00000037373.13	ENSMUST00000079746.10	2279	9	10	3	-3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGCCTGGCACCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	33432328	33405069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33406031_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33432122
ENSMUSG00000037373.13_3	chr5	-	2421	10	FSM	ENSMUSG00000037373.13	ENSMUST00000202868.4	2436	10	10	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTAAAGAAATAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	33432326	33405102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33406028_33406450_33406569_33406930_33407059_33407714_33407846_33408201_33408417_33416481_33416689_33418352_33418498_33424226_33424382_33426785_33426979_33432122
ENSMUSG00000037375.17_0	chr1	-	1136	10	FSM	ENSMUSG00000037375.17	ENST00000541565.5	1145	10	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAAAGGCAAACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	192442067	192194481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192423817_192423932_192431188_192431257_192441978
ENSMUSG00000037375.17_2	chr1	-	687	6	FSM	ENSMUSG00000037375.17	ENST00000367009.2	699	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAAAGGCAAACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	192376251	192194481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106
ENSMUSG00000037375.17_3	chr1	-	1477	11	FSM	ENSMUSG00000037375.17	ENST00000545154.5	1481	11	1	3	1	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGAAAGGCAAACCTATC	NA	NA	NA	NA	NA	NA	NA	NA	192431257	192194481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192194558_192196200_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188
ENSMUSG00000037375.17_48	chr1	-	2818	12	FSM	ENSMUSG00000037375.17	ENSMUST00000044190.12	2839	12	15	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCTAAACACATGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	192453516	192195141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_192196284_192235246_192235392_192277194_192277397_192343763_192343800_192376106_192376258_192399264_192399437_192408427_192408662_192409591_192409787_192423817_192423932_192431188_192431257_192441978_192442109_192453287
ENSMUSG00000037376.15_0	chr2	-	2807	11	FSM	ENSMUSG00000037376.15	ENSMUST00000039554.7	2828	11	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATAAGTCATTAATGAT	NA	NA	NA	NA	NA	NA	NA	NA	132657961	132646134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132652908_132653019_132653967_132654096_132657723
ENSMUSG00000037376.15_2	chr2	-	2037	10	FSM	ENSMUSG00000037376.15	ENST00000453074.6	2058	10	10	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGAAAGGGTGGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	132657967	132646800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_132647533_132648630_132648718_132648816_132648920_132650123_132650210_132650580_132650937_132651748_132651874_132652125_132652210_132652336_132652429_132653967_132654096_132657723
ENSMUSG00000037379.8_0	chr5	-	2027	6	FSM	ENSMUSG00000037379.8	ENSMUST00000046186.8	2045	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTCAGAGGGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	33375788	33371277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_33371997_33372892_33373068_33373676_33373869_33373940_33374165_33374587_33374808_33375291
ENSMUSG00000037386.17_0	chr15	+	4207	24	FSM	ENSMUSG00000037386.17	ENST00000504942.6	4223	24	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCGATACAAAAACCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	39061625	39545188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_39061934_39155496_39155708_39208705_39209017_39300392_39301319_39315435_39315504_39317755_39317876_39320073_39320174_39321159_39321284_39322984_39323032_39325893_39326007_39332550_39332599_39335729_39335861_39339775_39339948_39341952_39342107_39370361_39370431_39373040_39373198_39374656_39374771_39398233_39398414_39399267_39399378_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUSG00000037386.17_5	chr15	+	3669	6	FSM	ENSMUSG00000037386.17	ENSMUST00000226410.2	3685	6	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATGTTGTTGAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	39522975	39547766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_39523323_39538335_39538478_39542643_39542757_39543025_39543128_39544384_39544525_39544941
ENSMUSG00000037395.17_0	chr1	-	3758	11	FSM	ENSMUSG00000037395.17	ENSMUST00000110849.10	3791	11	23	10	23	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGTTAAAATTAACGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	191822284	191782855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191785456_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUSG00000037395.17_11	chr1	-	1830	12	FSM	ENSMUSG00000037395.17	ENSMUST00000192866.6	1844	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTATCATTGTACCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	191822350	191785091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191785456_191785925_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUSG00000037395.17_21	chr1	-	1588	10	FSM	ENSMUSG00000037395.17	ENSMUST00000192491.6	1623	10	30	5	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTGGGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	191822293	191785688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191786168_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUSG00000037395.17_23	chr1	-	1577	11	FSM	ENSMUSG00000037395.17	ENSMUST00000192128.6	1578	11	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTGTTGGGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	191822224	191785688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191786168_191792943_191793002_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUSG00000037395.17_4	chr1	-	3728	10	FSM	ENSMUSG00000037395.17	ENSMUST00000073279.13	3748	10	20	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACTACTGTTAAAATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	191822317	191782860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191785456_191800568_191800647_191804214_191804434_191807838_191807918_191808542_191808668_191810165_191810328_191812275_191812329_191814682_191814761_191821732_191821790_191822035
ENSMUSG00000037400.18_0	chr3	+	4858	30	FSM	ENSMUSG00000037400.18	ENSMUST00000029257.15	4868	30	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAACCCTGTTGTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	35808287	35910420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_35808560_35832173_35832291_35836660_35836751_35838655_35838737_35842235_35842344_35842574_35842704_35843706_35843811_35849907_35849956_35852742_35852808_35854632_35854715_35859882_35860034_35860916_35861115_35863505_35863746_35864269_35864446_35864794_35864864_35866211_35866286_35866361_35866466_35868192_35868375_35874057_35874262_35881093_35881248_35882749_35882853_35885514_35885661_35887069_35887130_35888443_35888572_35889387_35889527_35891107_35891174_35891634_35891739_35893197_35893364_35903582_35903714_35909253
ENSMUSG00000037408.11_0	chr1	+	4520	7	FSM	ENSMUSG00000037408.11	ENSMUST00000153128.2	4547	7	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATATAAGTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	36510715	36547833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36512167_36537070_36537215_36537475_36537611_36538491_36538662_36538965_36539063_36544681_36544861_36545489
ENSMUSG00000037410.14_0	chr9	-	5956	13	FSM	ENSMUSG00000037410.14	ENSMUST00000041767.14	5956	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGCCTCTACGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	90152822	90084079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_90087276_90089825_90089948_90091720_90091907_90097530_90097649_90100712_90101208_90104359_90104554_90105491_90105603_90108073_90108458_90109382_90109628_90110990_90111155_90123062_90123232_90131843_90131998_90152404
ENSMUSG00000037411.11_0	chr5	-	2991	9	FSM	ENSMUSG00000037411.11	ENSMUST00000041388.11	3011	9	5	15	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATGCAAACAAAATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	137101108	137090372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137092066_137092334_137092419_137093200_137093288_137093714_137093816_137095680_137095880_137096579_137096775_137098166_137098401_137099886_137100159_137100982
ENSMUSG00000037411.11_1	chr5	-	2654	10	FSM	ENSMUSG00000037411.11	ENSMUST00000077523.4	2697	10	32	11	32	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAATATGCAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137101076	137090376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137090949_137091249_137092066_137092334_137092419_137093200_137093288_137093714_137093816_137095680_137095880_137096579_137096775_137098166_137098401_137099886_137100159_137100982
ENSMUSG00000037415.8_1	chr8	-	5294	14	FSM	ENSMUSG00000037415.8	ENSMUST00000239468.2	5308	14	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCAATTGTGTCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	106553976	106494947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106498350_106498726_106498839_106499080_106499227_106499669_106499792_106500540_106500746_106500918_106501068_106501166_106501276_106502591_106502705_106506458_106506644_106508911_106508935_106513258_106513427_106532163_106532217_106552709_106552822_106553581
ENSMUSG00000037418.7_0	chr19	-	2069	12	FSM	ENSMUSG00000037418.7	ENSMUST00000117346.2	2080	12	8	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTTTCAGTGTGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	9978989	9962540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_9962787_9963560_9963736_9964014_9964359_9966485_9966638_9966965_9967047_9967837_9967991_9969000_9969079_9969420_9969576_9970129_9970364_9970591_9970687_9974390_9974579_9978821
ENSMUSG00000037419.10_1	chr9	-	4464	2	FSM	ENSMUSG00000037419.10	ENSMUST00000167549.2	4470	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGGAGTCACTGCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	14292532	14265285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_14269184_14291966
ENSMUSG00000037426.19_23	chr5	+	5012	40	FSM	ENSMUSG00000037426.19	ENST00000646969.1	5025	40	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATGTGTACATAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	33021938	33148968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33116624_33116691_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037426.19_31	chr5	+	1802	21	FSM	ENSMUSG00000037426.19	ENST00000646755.1	1811	21	8	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGCCACCACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33021931	33153761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075517_33153706
ENSMUSG00000037426.19_33	chr5	+	1737	20	ISM	ENSMUSG00000037426.19	ENSMUST00000049780.13	3569	33	877	38128	11	-38128	internal_fragment	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGGGGTGGGGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33021941	33075516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268
ENSMUSG00000037426.19_54	chr5	+	1655	19	ISM	ENSMUSG00000037426.19	ENST00000647438.1	1727	20	16	78246	9	-38128	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGGGGTGGGGGTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	33021939	33075516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268
ENSMUSG00000037426.19_55	chr5	+	1717	20	FSM	ENSMUSG00000037426.19	ENST00000647438.1	1727	20	9	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGTGCCACCACCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	33021932	33153761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075517_33153706
ENSMUSG00000037426.19_9	chr5	+	5197	41	FSM	ENSMUSG00000037426.19	ENST00000644331.1	5213	41	5	11	-2	5	multi-exon	TRUE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAGCAGAATCTAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	33021928	33148978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33022044_33025317_33025406_33026164_33026212_33032625_33032712_33034413_33034498_33035971_33036022_33044322_33044393_33050718_33050798_33053223_33053286_33055222_33055293_33056335_33056409_33058799_33058904_33059173_33059249_33061120_33061256_33061618_33061681_33061802_33061877_33067800_33067871_33069552_33069590_33070443_33070565_33075268_33075490_33081505_33081710_33084233_33084370_33085188_33085284_33091293_33091360_33094864_33095049_33095488_33095650_33100575_33100694_33101314_33101483_33102266_33102487_33103977_33104112_33113196_33113303_33121975_33122128_33125074_33125153_33125982_33126116_33131160_33131270_33132660_33132889_33136728_33136899_33141202_33141375_33144279_33144341_33148085_33148169_33148282
ENSMUSG00000037434.8_0	chr1	+	5195	2	FSM	ENSMUSG00000037434.8	ENSMUST00000044954.7	5244	2	44	5	44	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCTATTTTGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	191638922	191645354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191639726_191640962
ENSMUSG00000037440.9_0	chr10	+	2392	7	FSM	ENSMUSG00000037440.9	ENSMUST00000041416.8	2416	7	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCAGTCTTTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	23770602	23781234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23770990_23773190_23773322_23774305_23774499_23775291_23775584_23776482_23776842_23779283_23779455_23780375
ENSMUSG00000037443.14_0	chr4	-	3863	14	FSM	ENSMUSG00000037443.14	ENSMUST00000040271.12	3893	14	13	17	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACATTTAACAAACACTC	NA	NA	NA	NA	NA	NA	NA	NA	133914410	133857185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133858751_133859542_133859769_133861379_133861488_133864881_133864933_133866145_133866240_133875320_133875476_133875919_133876073_133879414_133879601_133881119_133881238_133881573_133881708_133882987_133883683_133894599_133894753_133900123_133900192_133914253
ENSMUSG00000037447.17_0	chr1	+	2990	6	FSM	ENSMUSG00000037447.17	ENSMUST00000115031.8	3002	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGAGCCCAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	36346840	36360146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36346918_36355292_36355409_36356284_36356744_36357164_36357263_36357568_36357735_36358072
ENSMUSG00000037447.17_1	chr1	+	4635	7	FSM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	2	3	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGTTGTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36346836	36362069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36346918_36355289_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ENSMUSG00000037447.17_2	chr1	+	5491	5	FSM	ENSMUSG00000037447.17	ENSMUST00000137906.2	5504	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTGAAACATTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	36346839	36363102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36346918_36355289_36355409_36357164_36357263_36357568_36357735_36358072
ENSMUSG00000037447.17_3	chr1	+	4555	6	ISM	ENSMUSG00000037447.17	ENSMUST00000115032.8	4640	7	8454	3	8439	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGGTTGTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36355288	36362069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_36355409_36356284_36356406_36356690_36356744_36357164_36357263_36357568_36357735_36358072
ENSMUSG00000037447.17_4	chr1	+	5405	4	ISM	ENSMUSG00000037447.17	ENSMUST00000137906.2	5504	5	8454	17	8439	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATTAACAATATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36355288	36363093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_36355409_36357164_36357263_36357568_36357735_36358072
ENSMUSG00000037455.17_0	chr10	+	2826	14	FSM	ENSMUSG00000037455.17	ENSMUST00000119597.8	2837	14	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCATTGTATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	23672890	23703862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692190_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ENSMUSG00000037455.17_7	chr10	+	2823	14	FSM	ENSMUSG00000037455.17	ENSMUST00000179321.8	2843	14	16	4	16	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCATTGTATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	23672899	23703862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_23673082_23674643_23674784_23679655_23679752_23680085_23680160_23681790_23681939_23686686_23686844_23692184_23692328_23694957_23695060_23696711_23696804_23698820_23698917_23700583_23700659_23701844_23701939_23702040_23702094_23702491
ENSMUSG00000037458.16_0	chr15	-	4858	12	FSM	ENSMUSG00000037458.16	ENSMUST00000065308.13	4871	12	10	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTTTGGGTGGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38519500	38487673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38514716_38514854_38519152
ENSMUSG00000037458.16_110	chr15	-	2835	13	FSM	ENSMUSG00000037458.16	ENST00000347770.8	2856	13	15	6	-12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATTGTGAAGTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	38519522	38489866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38490717_38491719_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507442_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_19	chr15	-	4203	13	FSM	ENSMUSG00000037458.16	ENST00000683787.1	4228	13	11	14	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACACAGATAAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	38519525	38488510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38490717_38491719_38491935_38492487_38492601_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037458.16_26	chr15	-	4081	12	FSM	ENSMUSG00000037458.16	ENST00000682014.1	4096	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACACAGATAAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	38519527	38488510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38490717_38491719_38491935_38492487_38492655_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501827_38514716_38514854_38519152
ENSMUSG00000037458.16_69	chr15	-	3823	13	FSM	ENSMUSG00000037458.16	ENST00000684721.1	3839	13	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTATATGATATTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	38519525	38488620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38490628_38491903_38491935_38492487_38492604_38493717_38493881_38494535_38494611_38495516_38495599_38497507_38497643_38498912_38499086_38500541_38500716_38501647_38501845_38507430_38507591_38514716_38514854_38519152
ENSMUSG00000037461.11_0	chr1	+	5333	20	FSM	ENSMUSG00000037461.11	ENSMUST00000045450.7	5347	20	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGTTGAGTGTGAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	191307761	191355800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_16	chr1	+	3005	19	FSM	ENSMUSG00000037461.11	ENST00000440600.6	3034	19	21	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAGTGTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	191307887	191353745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191308064_191314510_191314641_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347946_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037461.11_24	chr1	+	3112	20	FSM	ENSMUSG00000037461.11	ENST00000366993.7	3130	20	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTAGTGTAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	191307885	191353745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191308064_191314510_191314641_191315290_191315438_191318635_191318774_191326538_191326586_191328284_191328485_191328998_191329122_191334356_191334475_191336918_191337054_191338232_191338331_191339931_191340172_191342475_191342614_191343969_191344177_191345126_191345322_191345750_191345855_191346690_191346760_191347812_191347904_191349923_191350023_191351707_191351894_191353276
ENSMUSG00000037465.11_0	chr15	-	2129	5	FSM	ENSMUSG00000037465.11	ENSMUST00000227920.2	2144	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATCAACACACACACAG	NA	NA	NA	NA	NA	NA	NA	NA	38300943	38291714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38292469_38296318_38296409_38296858_38297772_38297865_38298097_38300802
ENSMUSG00000037465.11_1	chr15	-	3028	4	FSM	ENSMUSG00000037465.11	ENSMUST00000074043.7	3044	4	13	3	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGAGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38300937	38294659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38300802
ENSMUSG00000037465.11_3	chr15	-	2917	4	FSM	ENSMUSG00000037465.11	ENSMUST00000226363.2	2917	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAGTGAGTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	38299326	38294659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38296409_38296858_38297772_38297865_38298097_38299302
ENSMUSG00000037466.14_0	chr12	+	2420	8	FSM	ENSMUSG00000037466.14	ENSMUST00000049271.13	2441	8	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTACTTAAGCTCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	113120052	113128155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113120192_113120294_113120374_113120780_113120984_113121197_113121348_113121688_113121788_113124922_113125010_113125332_113125513_113126672
ENSMUSG00000037469.12_0	chr7	-	856	8	FSM	ENSMUSG00000037469.12	ENST00000594229.1	870	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGGTGAGCAGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	28316673	28313650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28313716_28313817_28313886_28313960_28314019_28314104_28314213_28314285_28314401_28314497_28314561_28315905_28316089_28316477
ENSMUSG00000037470.15_0	chr1	-	9014	41	FSM	ENSMUSG00000037470.15	ENSMUST00000046875.14	9033	41	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGTCTGCTTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36283369	36179109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36183333_36185112_36185267_36185705_36185823_36189125_36189241_36190714_36190876_36194153_36194337_36195307_36195393_36196480_36196583_36197188_36197278_36199022_36199108_36200756_36200843_36201285_36201445_36202301_36202492_36203524_36203605_36204589_36204693_36209279_36209376_36212515_36212647_36213159_36213292_36213976_36214184_36215313_36215409_36215856_36215881_36216598_36216698_36218639_36218761_36221550_36221716_36223436_36223569_36224913_36225050_36230609_36230696_36231466_36231587_36234930_36235082_36236624_36236717_36240785_36240847_36241859_36241960_36247022_36247124_36249066_36249146_36250470_36250568_36255212_36255388_36260292_36260406_36266564_36266696_36269738_36269822_36273887_36274024_36283150
ENSMUSG00000037474.14_0	chr1	-	4204	15	FSM	ENSMUSG00000037474.14	ENSMUST00000027933.11	4212	15	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGTGGAAGAGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	191307648	191269476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191271454_191272815_191273649_191278602_191278736_191280407_191280498_191285099_191285213_191288552_191288658_191288895_191289000_191290172_191290247_191293536_191293650_191295222_191295289_191300402_191300524_191300606_191300669_191301778_191301878_191302690_191302817_191307460
ENSMUSG00000037475.16_0	chrX	-	7608	39	FSM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATATCATTGTGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	41000772	40883875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668_40986728_41000677
ENSMUSG00000037475.16_8	chrX	-	7514	38	ISM	ENSMUSG00000037475.16	ENSMUST00000047037.15	7622	39	14051	7	14051	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATCATTGTGTATATT	NA	NA	NA	NA	NA	NA	NA	NA	40986727	40883874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_40886657_40891823_40891870_40892332_40892410_40895278_40895440_40895521_40895592_40895910_40896049_40901335_40901372_40902826_40902886_40903074_40903506_40911244_40911348_40911569_40911749_40912238_40912424_40912510_40912643_40912966_40913096_40914312_40914471_40914896_40915039_40916059_40916336_40919569_40919735_40922185_40922366_40923974_40924093_40925377_40925475_40926991_40927073_40927460_40927555_40928426_40928512_40932903_40933006_40933101_40933233_40933640_40933683_40945610_40945807_40946940_40947114_40947675_40947832_40949001_40949095_40952905_40953073_40961166_40961301_40961441_40961564_40962758_40962830_40968762_40968815_40970785_40970878_40986668
ENSMUSG00000037486.19_0	chr12	+	8849	11	NNC	ENSMUSG00000037486.19	novel	8887	12	NA	NA	-20	-12	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTGAAATTAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	3476880	3556835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_3477213_3492473_3492558_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224_3546937_3549978
ENSMUSG00000037486.19_1	chr12	+	11908	10	NNC	ENSMUSG00000037486.19	novel	11934	11	NA	NA	11	-12	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTGAAATTAAAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	3476867	3556835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_3477213_3492473_3492562_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ENSMUSG00000037486.19_2	chr12	+	11924	10	NNC	ENSMUSG00000037486.19	novel	11934	11	NA	NA	0	-6	intron_retention	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTAAAAATCTTGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	3476856	3556841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_3477213_3492473_3492561_3501661_3501771_3507061_3507210_3519477_3519594_3524489_3524614_3534444_3534609_3539636_3539734_3543733_3543840_3546224
ENSMUSG00000037487.8_2	chr15	-	9226	59	FSM	ENSMUSG00000037487.8	ENSMUST00000110336.4	9242	59	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGCTTTTTTATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	38079088	37968108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37968750_37970505_37970592_37971991_37972137_37973146_37973261_37973546_37973703_37975830_37975916_37976303_37976480_37978265_37978327_37980033_37980165_37981063_37981209_37981709_37981822_37984190_37984435_37986121_37986221_37986322_37986444_37988447_37988669_37989526_37989641_37989723_37989897_37991540_37991615_37992195_37992427_37996798_37997011_37997167_37997437_37997964_37998223_37998530_37998663_38000136_38000249_38000813_38000938_38002460_38002701_38002800_38002962_38004067_38004198_38004289_38004417_38004492_38004612_38004785_38004933_38006111_38006204_38006698_38006848_38008193_38008292_38008903_38009028_38009362_38009459_38009869_38010022_38013685_38013813_38015181_38015393_38018522_38018721_38019131_38019287_38019477_38019590_38019673_38019818_38021806_38021920_38022608_38022719_38024990_38025176_38028876_38028995_38029742_38029898_38030865_38030977_38031065_38031183_38038059_38038254_38040996_38041147_38041691_38041852_38042018_38042209_38045936_38046057_38047278_38047356_38047786_38047869_38048348_38048394_38078607
ENSMUSG00000037490.6_0	chr10	+	4155	5	FSM	ENSMUSG00000037490.6	ENSMUST00000042261.5	4167	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22520912	22580175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22521213_22540261_22541606_22568033_22568157_22569892_22570026_22577920
ENSMUSG00000037492.17_0	chr8	+	2137	6	FSM	ENSMUSG00000037492.17	ENST00000315769.11	2151	6	11	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2596	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTGGTTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	24159680	24551311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_24159818_24238415_24238522_24287357_24287448_24392030_24392188_24505131_24505229_24549761
ENSMUSG00000037493.7_0	chr9	-	1423	6	FSM	ENSMUSG00000037493.7	ENSMUST00000041901.7	1433	6	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTCTCCGTGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	54467493	54452078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54461770_54461806_54467251
ENSMUSG00000037493.7_5	chr9	-	674	5	FSM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCAAAAAAATTAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	54467310	54452609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064_54457177_54467251
ENSMUSG00000037493.7_6	chr9	-	609	4	ISM	ENSMUSG00000037493.7	ENST00000539011.5	685	5	10141	10	10141	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCAAAAAAATTAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	54457170	54452609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_54452769_54453172_54453369_54455616_54455765_54457064
ENSMUSG00000037499.10_0	chr1	-	723	4	FSM	ENSMUSG00000037499.10	ENSMUST00000046770.10	742	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGGAGACTCTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	191050380	191038993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191039287_191042115_191042220_191043656_191043718_191050115
ENSMUSG00000037503.13_0	chr1	-	5049	8	FSM	ENSMUSG00000037503.13	ENSMUST00000167518.8	5058	8	3	6	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACCTTTTCGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	34882128	34852305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34863100_34863137_34867847_34867929_34875813_34875895_34881908
ENSMUSG00000037503.13_4	chr1	-	5006	7	FSM	ENSMUSG00000037503.13	ENSMUST00000047534.12	5030	7	23	1	-8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTGACCTTTTCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34882123	34852307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_34856486_34857077_34857208_34858672_34858851_34858947_34859091_34867847_34867929_34875813_34875895_34881908
ENSMUSG00000037509.22_0	chr1	+	6488	14	FSM	ENSMUSG00000037509.22	ENSMUST00000159747.9	6514	14	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGTGACCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34717282	34851808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34717344_34760784_34764241_34771189_34771490_34784398_34784526_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ENSMUSG00000037509.22_1	chr1	+	6418	13	ISM	ENSMUSG00000037509.22	ENSMUST00000159747.9	6514	14	43514	23	43514	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAAACGAATGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34760782	34851797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_34764241_34771189_34771490_34784398_34784526_34832306_34832444_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ENSMUSG00000037509.22_2	chr1	+	3279	10	FSM	ENSMUSG00000037509.22	ENSMUST00000047664.16	3287	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATTTTAAATCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34840784	34852382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_34841083_34843994_34844175_34845036_34845217_34845395_34845576_34846139_34846373_34846722_34846853_34848777_34848910_34849391_34849636_34850166_34850245_34850758
ENSMUSG00000037514.19_0	chr2	+	4249	7	FSM	ENSMUSG00000037514.19	ENSMUST00000150843.9	4266	7	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTGTTTGCTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	131104432	131141104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131104736_131115830_131116184_131122076_131122331_131124511_131124689_131129393_131129518_131135318_131135445_131138192
ENSMUSG00000037519.18_0	chr7	-	5169	31	FSM	ENSMUSG00000037519.18	ENSMUST00000168134.10	5181	31	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCCAGTTAAGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	144107461	144030501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144031727_144032763_144032835_144034821_144034988_144035447_144035517_144035996_144036173_144038580_144038679_144038769_144038946_144042427_144042455_144042933_144042997_144045188_144045390_144045478_144045561_144052033_144052128_144052443_144052617_144053988_144054141_144056603_144056634_144058639_144058872_144059807_144060032_144061865_144062002_144064018_144064099_144064610_144064674_144066982_144067115_144068177_144068262_144069722_144069858_144071336_144071484_144072885_144073105_144073281_144073384_144073712_144073788_144074361_144074527_144074696_144074799_144106006_144106271_144107255
ENSMUSG00000037523.14_0	chr2	+	2860	7	FSM	ENSMUSG00000037523.14	ENSMUST00000041362.12	2867	7	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	131075990	131089942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131076048_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUSG00000037523.14_3	chr2	+	3048	7	FSM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	131076030	131089942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131076276_131080655_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUSG00000037523.14_4	chr2	+	2797	6	ISM	ENSMUSG00000037523.14	ENSMUST00000110199.3	3057	7	4637	3	4637	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTGTGAGTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	131080661	131089942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_131080831_131082234_131082413_131083799_131083970_131085038_131085193_131087122_131087590_131088283
ENSMUSG00000037525.6_0	chr15	-	1249	2	FSM	ENSMUSG00000037525.6	ENSMUST00000040313.6	1276	2	6	21	6	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAGAACGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99372605	99367980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99368961_99372336
ENSMUSG00000037526.8_0	chr14	-	3719	11	FSM	ENSMUSG00000037526.8	ENSMUST00000226299.2	3729	11	3	7	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTACTTGGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47808103	47778356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642_47806089_47808025
ENSMUSG00000037526.8_1	chr14	-	3431	10	FSM	ENSMUSG00000037526.8	ENSMUST00000042988.7	3450	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTACTTGGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	47805878	47778356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47780601_47783084_47783171_47783247_47783339_47784697_47784816_47786375_47786606_47788704_47788943_47792016_47792099_47796630_47796674_47798077_47798141_47805642
ENSMUSG00000037531.9_0	chr3	-	3346	7	FSM	ENSMUSG00000037531.9	ENSMUST00000043966.8	3364	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAATCTTATTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	32791286	32779553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_32781867_32782580_32782677_32784229_32784361_32785308_32785406_32787737_32787799_32788256_32788409_32790790
ENSMUSG00000037533.21_0	chr11	+	8167	28	FSM	ENSMUSG00000037533.21	ENSMUST00000102743.10	8189	28	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGCATCAACTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54413682	54590099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ENSMUSG00000037533.21_10	chr11	+	3471	18	FSM	ENSMUSG00000037533.21	ENSMUST00000108894.2	3475	18	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGACATTGGGCAGACGA	NA	NA	NA	NA	NA	NA	NA	NA	54513191	54578926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54562480_54562505_54567020_54567242_54570064_54570254_54574717_54574853_54578369
ENSMUSG00000037533.21_12	chr11	+	7122	18	FSM	ENSMUSG00000037533.21	ENSMUST00000239168.2	7131	18	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCATCAACTGTGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	54517164	54590102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ENSMUSG00000037533.21_4	chr11	+	1804	13	FSM	ENSMUSG00000037533.21	ENSMUST00000108895.8	1829	13	5	20	5	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAATTTAAAAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	54413720	54525815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585
ENSMUSG00000037533.21_5	chr11	+	5850	29	FSM	ENSMUSG00000037533.21	ENSMUST00000101206.10	5864	29	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAGAAATATTGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	54413717	54587793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_54413945_54434404_54434476_54437198_54437256_54443615_54443700_54452150_54452221_54459178_54459323_54501613_54501746_54510711_54510890_54513141_54513279_54516686_54516846_54517410_54517564_54522017_54522183_54525585_54525694_54526837_54527042_54530575_54530685_54533536_54533778_54540007_54540166_54548071_54548313_54551628_54552013_54554828_54555041_54559439_54559564_54562480_54562505_54567020_54567242_54570064_54570254_54574717_54574853_54581002_54581232_54582063_54582567_54585095_54585399_54586905
ENSMUSG00000037536.15_0	chr14	+	2924	2	FSM	ENSMUSG00000037536.15	ENSMUST00000043112.9	2937	2	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACGTTTTAAATGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	47710021	47769402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47710175_47766631
ENSMUSG00000037536.15_1	chr14	+	3113	4	FSM	ENSMUSG00000037536.15	ENSMUST00000163324.8	3132	4	12	7	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	47710029	47769412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47710175_47738250_47738328_47763661_47763772_47766631
ENSMUSG00000037536.15_2	chr14	+	2972	3	FSM	ENSMUSG00000037536.15	ENSMUST00000168833.9	2993	3	7	14	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACGTTTTAAATGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	47710082	47769401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47710175_47763661_47763772_47766631
ENSMUSG00000037536.15_3	chr14	+	3411	7	FSM	ENSMUSG00000037536.15	ENSMUST00000095941.9	3418	7	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTGTCTGGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47710094	47769354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47710175_47738250_47738328_47742442_47742590_47744721_47744904_47745632_47745725_47763661_47763772_47766631
ENSMUSG00000037536.15_5	chr14	+	3139	4	FSM	ENSMUSG00000037536.15	ENSMUST00000165714.2	3159	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	47744828	47769412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47744904_47746513_47746687_47763661_47763772_47766631
ENSMUSG00000037536.15_7	chr14	+	2894	2	ISM	ENSMUSG00000037536.15	ENSMUST00000165714.2	3159	4	18850	0	18850	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGGTCTGGTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	47763658	47769412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_47763772_47766631
ENSMUSG00000037541.23_0	chr7	+	908	5	ISM	ENSMUSG00000037541.23	ENST00000468619.6	927	6	6	36549	6	-36549	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGAAGCTCTTCCGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	143729406	143812819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_143729694_143733491_143733811_143740556_143740727_143746153_143746268_143812801
ENSMUSG00000037541.23_1	chr7	+	884	4	ISM	ENSMUSG00000037541.23	ENST00000468619.6	927	6	12	103101	12	-103101	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGTGACCTCACAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	143729412	143746267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_143729694_143733491_143733811_143740556_143740727_143746153
ENSMUSG00000037542.14_0	chr10	+	1287	6	FSM	ENSMUSG00000037542.14	ENST00000367845.6	1304	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGATCATCCTACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	21253248	21271733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21253378_21256728_21256877_21258190_21258347_21260534_21260685_21264966_21265224_21271286
ENSMUSG00000037542.14_2	chr10	+	1301	6	FSM	ENSMUSG00000037542.14	ENST00000367847.2	1316	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATCATCCTACAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	21253247	21271734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_21253378_21256728_21256877_21258190_21258347_21264966_21265224_21267465_21267628_21271286
ENSMUSG00000037544.15_16	chr14	-	4058	17	FSM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATCTAAAAAGAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	47655631	47626180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037544.15_17	chr14	-	3981	16	ISM	ENSMUSG00000037544.15	ENSMUST00000180299.8	4067	17	1612	11	1612	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTATATCTAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	47654022	47626185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792
ENSMUSG00000037544.15_3	chr14	-	2931	19	FSM	ENSMUSG00000037544.15	ENSMUST00000043296.10	2964	19	12	21	12	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACAAACAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	47655852	47625256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47625581_47626868_47626916_47627899_47628120_47629178_47629237_47631593_47631775_47633211_47633432_47635874_47635968_47636976_47637138_47638977_47639064_47643231_47643359_47643795_47643876_47645093_47645369_47647764_47647836_47648901_47649025_47649115_47649201_47650434_47650498_47651102_47651297_47653792_47654029_47655565
ENSMUSG00000037552.18_0	chr7	-	4851	19	FSM	ENSMUSG00000037552.18	ENSMUST00000119990.8	4880	19	23	6	23	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGCTGTGTGTTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	28071896	28059035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28060687_28061232_28062134_28062250_28062425_28063722_28063740_28063895_28063935_28064009_28064058_28064149_28064252_28064341_28064376_28064706_28064794_28064877_28064971_28067059_28067261_28067398_28067537_28067715_28067867_28068103_28068151_28068245_28068313_28069485_28069587_28069662_28069920_28070539_28070671_28071284
ENSMUSG00000037553.15_0	chr4	-	4571	8	FSM	ENSMUSG00000037553.15	ENSMUST00000084238.5	4580	8	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTGGAGTGTTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	133360776	133332614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133336085_133337680_133337794_133340233_133340337_133340949_133340999_133341111_133341250_133342490_133342641_133354510_133354672_133360389
ENSMUSG00000037563.16_0	chr7	+	1091	5	FSM	ENSMUSG00000037563.16	ENSMUST00000082134.6	1109	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14010	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTAATCCTCTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	28050086	28052572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28050277_28050416_28050519_28051601_28051699_28051787_28051836_28051918
ENSMUSG00000037568.13_0	chr1	-	3883	8	FSM	ENSMUSG00000037568.13	ENSMUST00000166139.7	3897	8	7	7	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAATCACTTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	190711486	190679849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190711333
ENSMUSG00000037568.13_1	chr1	-	4011	8	FSM	ENSMUSG00000037568.13	ENSMUST00000047409.9	4032	8	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCAATCACTTGCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	190711183	190679849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190682454_190690810_190690927_190692294_190692677_190698399_190698475_190699125_190699183_190702600_190702690_190710377_190710785_190710902
ENSMUSG00000037570.17_0	chr15	-	1903	15	FSM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	7	6	7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	99149835	99140703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343_99148464_99149742
ENSMUSG00000037570.17_1	chr15	-	1811	14	ISM	ENSMUSG00000037570.17	ENSMUST00000041190.17	1916	15	1378	6	1362	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTAGCTTCTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	99148464	99140703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99148343
ENSMUSG00000037570.17_9	chr15	-	1760	14	FSM	ENSMUSG00000037570.17	ENSMUST00000163506.3	1771	14	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTTCCAAAGTAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	99149822	99140713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99141102_99141198_99141327_99141560_99141649_99141805_99141889_99142025_99142119_99142228_99142258_99142528_99142605_99144807_99144947_99145159_99145269_99146331_99146442_99146582_99146742_99147248_99147388_99147756_99147896_99149742
ENSMUSG00000037572.18_0	chr14	-	4251	25	FSM	ENSMUSG00000037572.18	ENSMUST00000187531.8	4260	25	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCATATTTGTCTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	47514287	47478407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47484837_47484892_47485242_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200_47512313_47513977
ENSMUSG00000037572.18_6	chr14	-	3254	23	FSM	ENSMUSG00000037572.18	ENST00000360586.8	3277	23	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAGGAAGGATTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	47512297	47479073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47479270_47481259_47481399_47482441_47482570_47482743_47482915_47483289_47483334_47485194_47485356_47485452_47485671_47488216_47488349_47489374_47489490_47493560_47493718_47495977_47496116_47498796_47499039_47500895_47501081_47503130_47503316_47504437_47504631_47505528_47505671_47506112_47506220_47507591_47507685_47509592_47509689_47510323_47510375_47510568_47510681_47511369_47511522_47512200
ENSMUSG00000037573.6_0	chr11	+	1344	2	FSM	ENSMUSG00000037573.6	ENST00000268957.3	1360	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTAAAAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	94101089	94105548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94101197_94104311
ENSMUSG00000037573.6_3	chr11	+	2262	2	FSM	ENSMUSG00000037573.6	ENSMUST00000041589.6	2288	2	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTAAAAATGCCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	94102294	94106310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94102558_94104311
ENSMUSG00000037580.11_0	chr14	-	2756	6	FSM	ENSMUSG00000037580.11	ENSMUST00000089959.7	2775	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTTCTTGTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	47426858	47391358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47393382_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ENSMUSG00000037580.11_3	chr14	-	819	6	FSM	ENSMUSG00000037580.11	ENST00000543643.6	840	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGATTAAAGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	47426712	47391377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47391610_47394865_47394951_47396319_47396352_47403932_47403989_47406668_47406779_47426408
ENSMUSG00000037594.12_0	chr12	+	1940	5	FSM	ENSMUSG00000037594.12	ENSMUST00000037014.11	1960	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTGTGTGTTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	112772569	112779865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112773429_112774493_112774631_112775802_112775933_112778082_112778200_112779168
ENSMUSG00000037601.12_0	chr11	-	3170	5	FSM	ENSMUSG00000037601.12	ENSMUST00000135884.8	3181	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5881	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATATTATGTGTAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93859337	93847805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93850340_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000037605.17_0	chr5	+	6356	26	FSM	ENSMUSG00000037605.17	ENSMUST00000120128.8	6370	26	3	11	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGATTGCTTTGACGT	NA	NA	NA	NA	NA	NA	NA	NA	81169089	81944481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_81169193_81345412_81345479_81457717_81457927_81535621_81535836_81613041_81613152_81657570_81657586_81659830_81660632_81708709_81708791_81794256_81794560_81796475_81796580_81808108_81808295_81811232_81811272_81836355_81836540_81837411_81837535_81841339_81841549_81842297_81842475_81871908_81872119_81874515_81874737_81886873_81886941_81888901_81888994_81905832_81905860_81908473_81908643_81913984_81914111_81919430_81919528_81940207_81940260_81942110
ENSMUSG00000037606.19_0	chr7	-	3761	22	FSM	ENSMUSG00000037606.19	ENSMUST00000119499.8	3775	22	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATGTATTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	143294075	143242509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143294006
ENSMUSG00000037606.19_1	chr7	-	3691	21	ISM	ENSMUSG00000037606.19	ENSMUST00000119499.8	3775	22	24520	11	3	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATGTATTTCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	143269558	143242509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402
ENSMUSG00000037606.19_20	chr7	-	2541	19	FSM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGTGTGCCCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	143263586	143243293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262867_143262949_143263275_143263378_143263509
ENSMUSG00000037606.19_21	chr7	-	2466	18	ISM	ENSMUSG00000037606.19	ENST00000525498.5	2546	19	212	0	212	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCAGTGTGCCCCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	143263379	143243293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262867_143262949_143263275
ENSMUSG00000037606.19_3	chr7	-	3971	22	FSM	ENSMUSG00000037606.19	ENSMUST00000020411.14	3994	22	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATGTATTTCTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	143295686	143242507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143243695_143245624_143245728_143246594_143246722_143247508_143247636_143247934_143248121_143248545_143248683_143248776_143248867_143249251_143249350_143252970_143253070_143254450_143254548_143254928_143255028_143256426_143256509_143256887_143257073_143258246_143258440_143258705_143258878_143261082_143261168_143262744_143262949_143263275_143263378_143263509_143263591_143267232_143267316_143269402_143269560_143295409
ENSMUSG00000037608.17_0	chr10	+	5288	12	FSM	ENSMUSG00000037608.17	ENSMUST00000092678.10	5307	12	10	9	-5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTAATAGCTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20188224	20218238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454_20215668_20215797
ENSMUSG00000037608.17_10	chr10	+	3135	13	FSM	ENSMUSG00000037608.17	ENSMUST00000185800.7	3142	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATATTTGTAACTATCAA	NA	NA	NA	NA	NA	NA	NA	NA	20188289	20216009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037608.17_15	chr10	+	2585	9	FSM	ENSMUSG00000037608.17	ENST00000392348.6	2602	9	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAAAGGTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	20197762	20215655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20197863_20198714_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20215454
ENSMUSG00000037608.17_3	chr10	+	5419	13	FSM	ENSMUSG00000037608.17	ENSMUST00000043881.12	5437	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGTAATAGCTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20188240	20218238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_20188351_20193753_20193858_20197748_20197863_20198708_20199615_20200885_20201552_20201675_20201846_20203847_20203954_20205055_20205141_20207831_20208008_20209137_20209319_20210244_20210392_20215454_20215668_20215797
ENSMUSG00000037610.16_0	chr3	+	2583	5	NNC	ENSMUSG00000037610.16	novel	2600	5	NA	NA	15	-6	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGGACTTCAAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31956670	32253908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_31957077_32210193_32210319_32232979_32233151_32235979_32236176_32252223
ENSMUSG00000037613.17_0	chr7	-	1457	6	FSM	ENSMUSG00000037613.17	ENSMUST00000152703.2	1476	6	9	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGAACAGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	143239600	143221360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143222330_143223718_143223793_143224568_143224681_143233681_143233811_143235196_143235288_143239518
ENSMUSG00000037613.17_1	chr7	-	1368	5	ISM	ENSMUSG00000037613.17	ENSMUST00000152703.2	1476	6	4329	10	4328	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGGAACAGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	143235280	143221360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143222330_143223718_143223793_143224568_143224681_143233681_143233811_143235196
ENSMUSG00000037621.9_0	chr6	-	2334	3	FSM	ENSMUSG00000037621.9	ENSMUST00000042646.8	2355	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATAAAGGGCTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72212550	72183170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72184140_72200725_72200918_72211377
ENSMUSG00000037622.15_0	chr4	-	4161	16	FSM	ENSMUSG00000037622.15	ENSMUST00000043305.14	4191	16	29	1	-24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTGGCATTTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	133066606	133019770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133021697_133022508_133022702_133023726_133023905_133024730_133024967_133027871_133028046_133029029_133029139_133029693_133029767_133030861_133030978_133031461_133031557_133033134_133033318_133036059_133036248_133040617_133040730_133041070_133041118_133049482_133049567_133051138_133051286_133066306
ENSMUSG00000037624.16_0	chr1	-	3267	7	FSM	ENSMUSG00000037624.16	ENSMUST00000079451.13	3297	7	19	11	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAAATCAGCTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	189076370	188940137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_188942305_188975083_188975224_188988764_188988952_188990934_188991096_189027790_189027909_189071981_189072293_189076187
ENSMUSG00000037627.17_0	chr15	-	3061	18	FSM	ENSMUSG00000037627.17	ENST00000523287.5	3086	18	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATAAGCAGAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36107258	36015812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36015916_36025953_36026134_36040698_36040861_36043350_36043420_36046159_36046319_36048881_36049045_36050214_36050385_36052967_36053061_36054829_36055025_36080962_36081065_36082058_36082185_36083772_36083888_36087483_36087615_36092969_36093145_36098360_36098523_36099748_36100362_36101872_36102003_36107045
ENSMUSG00000037628.11_0	chr14	+	899	8	FSM	ENSMUSG00000037628.11	ENSMUST00000067426.6	917	8	11	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGTTGTCCAGCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	46998008	47009119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_46998106_46999984_47000068_47001980_47002037_47002452_47002498_47004632_47004856_47006322_47006355_47007292_47007394_47008857
ENSMUSG00000037628.11_10	chr14	+	485	5	FSM	ENSMUSG00000037628.11	ENST00000395577.2	491	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATGAAGATCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	47002452	47008938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47002498_47004632_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUSG00000037628.11_15	chr14	+	432	4	ISM	ENSMUSG00000037628.11	ENST00000395577.2	491	5	2188	6	2188	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATGAAGATCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	47004640	47008938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_47004856_47006322_47006355_47007289_47007394_47008857
ENSMUSG00000037628.11_5	chr14	+	420	4	FSM	ENSMUSG00000037628.11	ENST00000543789.6	429	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATCAAGGTAAGAACTGG	NA	NA	NA	NA	NA	NA	NA	NA	47001979	47007384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47002037_47002452_47002498_47004632_47004856_47007289
ENSMUSG00000037628.11_6	chr14	+	525	5	FSM	ENSMUSG00000037628.11	ENST00000611205.4	532	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATAATGAAGATCCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	47001980	47008938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47002037_47002452_47002498_47004632_47004872_47007289_47007394_47008857
ENSMUSG00000037636.7_0	chrX	+	1085	5	FSM	ENSMUSG00000037636.7	ENSMUST00000047655.7	1111	5	24	2	24	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAGCTGACTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	36007335	36040853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36007672_36015785_36016028_36021420_36021594_36039134_36039270_36040654
ENSMUSG00000037640.16_0	chr7	+	5886	5	FSM	ENSMUSG00000037640.16	ENSMUST00000108336.8	5896	5	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTTTTGTCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	27430814	27453118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27430896_27436360_27436414_27437727_27437855_27440381_27440481_27447592
ENSMUSG00000037640.16_1	chr7	+	5796	4	FSM	ENSMUSG00000037640.16	ENSMUST00000167955.2	2115	4	-11	-3670	-11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTTTTGTCTTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	27436369	27453118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27436414_27437727_27437855_27440381_27440481_27447592
ENSMUSG00000037643.15_0	chr3	+	4673	18	FSM	ENSMUSG00000037643.15	ENSMUST00000108249.9	4708	18	9	26	9	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAACCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31049904	31107082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_31050235_31072698_31072821_31079278_31079369_31080401_31080453_31083634_31083721_31085232_31085374_31087326_31087379_31088647_31088707_31091994_31092172_31092598_31092697_31093177_31093265_31093516_31093653_31095590_31095679_31097839_31097966_31099030_31099111_31100621_31100712_31101120_31101237_31104338
ENSMUSG00000037646.11_0	chr15	+	13732	62	FSM	ENSMUSG00000037646.11	ENSMUST00000048646.9	13757	62	24	1	24	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGTGTGCTGTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	35371329	35931374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_35371924_35372078_35372254_35379034_35379179_35417656_35417778_35422453_35422622_35423261_35423444_35430255_35430431_35438858_35439125_35445715_35445812_35446183_35446307_35446768_35446907_35447830_35447919_35448675_35448868_35452243_35452414_35455102_35455298_35456760_35456886_35472028_35472211_35533441_35533577_35534332_35534507_35572205_35572316_35576524_35576673_35597540_35597669_35607275_35607511_35617743_35617965_35623747_35623952_35639998_35640171_35640675_35640791_35642543_35642611_35646118_35646528_35652400_35652513_35668846_35669051_35671444_35671572_35674954_35675099_35709271_35709960_35745792_35745931_35770601_35771010_35792184_35792388_35793979_35794185_35794450_35794636_35834329_35834527_35840020_35840203_35841394_35841745_35846991_35847154_35869432_35869589_35875707_35875972_35876525_35876610_35876787_35876964_35877642_35877814_35878788_35878991_35879914_35880104_35883034_35883182_35884652_35884937_35887022_35887151_35887328_35887529_35905417_35905537_35910292_35911096_35914919_35915097_35917192_35917364_35923332_35923510_35925449_35925553_35926186_35926437_35930000
ENSMUSG00000037649.11_0	chr17	+	1656	6	FSM	ENSMUSG00000037649.11	ENSMUST00000042121.11	1658	6	1	1	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTACTAGACAAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	34341806	34358074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34341909_34354155_34354733_34356087_34356373_34356876_34357156_34357380_34357510_34357790
ENSMUSG00000037652.16_0	chr3	-	10975	15	FSM	ENSMUSG00000037652.16	ENSMUST00000168645.8	10976	15	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATTTTTATTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	31023550	30953520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921_31020085_31023507
ENSMUSG00000037652.16_1	chr3	-	10892	14	ISM	ENSMUSG00000037652.16	ENSMUST00000168645.8	10976	15	3499	8	3497	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGTTATTGAATTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	31020051	30953527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_30961640_30968243_30968476_30968566_30968700_30970751_30970867_30976345_30976506_30983961_30984213_30985887_30986042_30990433_30991306_30996557_30996802_31002850_31002950_31005024_31005181_31012157_31012236_31015876_31016033_31019921
ENSMUSG00000037652.16_2	chr3	-	446	3	ISM	ENSMUSG00000037652.16	ENST00000481639.1	501	4	3484	9	3474	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTGCTGTTCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	31020074	31012086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_31012236_31015876_31016021_31019921
ENSMUSG00000037652.16_3	chr3	-	492	4	FSM	ENSMUSG00000037652.16	ENST00000481639.1	501	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGCTGCTGTTCAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	31023558	31012086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_31012236_31015876_31016021_31019921_31020085_31023522
ENSMUSG00000037656.10_0	chr8	+	3550	11	FSM	ENSMUSG00000037656.10	ENSMUST00000067786.9	3566	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTACTTCTGACGTC	NA	NA	NA	NA	NA	NA	NA	NA	22966814	23059623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22966942_23025034_23025589_23028819_23028961_23030375_23030462_23035519_23035617_23048957_23049075_23050512_23050717_23050902_23051495_23054044_23054231_23055629_23055715_23058262
ENSMUSG00000037664.14_1	chr7	-	1884	4	FSM	ENSMUSG00000037664.14	ENSMUST00000037287.8	1901	4	9	8	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAAATCATACTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	143014778	143012086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143012759_143012848_143012988_143013531_143014416_143014589
ENSMUSG00000037664.14_2	chr7	-	1854	4	FSM	ENSMUSG00000037664.14	ENST00000414822.8	1872	4	9	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGGCCCAACAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	143014724	143012096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143012754_143012848_143012988_143013495_143013704_143013874
ENSMUSG00000037664.14_3	chr7	-	1854	4	FSM	ENSMUSG00000037664.14	ENST00000430149.3	1871	4	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGGCCCAACAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	143014719	143012096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143012759_143012848_143012988_143013495_143013704_143013874
ENSMUSG00000037664.14_8	chr7	-	613	3	FSM	ENSMUSG00000037664.14	ENST00000647251.1	640	3	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAAAGAGAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	143014367	143012496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143012754_143012848_143012988_143014150
ENSMUSG00000037669.16_0	chr12	+	2726	7	FSM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTACTGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	8258112	8335754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8258193_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_10	chr12	+	2646	6	ISM	ENSMUSG00000037669.16	ENSMUST00000037383.13	2737	7	12493	5	12453	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTACTGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	8270599	8335754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8325807_8325891_8333899
ENSMUSG00000037669.16_6	chr12	+	2619	6	FSM	ENSMUSG00000037669.16	ENSMUST00000169104.3	2626	6	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTACTGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	8258148	8335754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_8258205_8270599_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8333899
ENSMUSG00000037669.16_9	chr12	+	2558	5	ISM	ENSMUSG00000037669.16	ENSMUST00000169104.3	2626	6	12458	5	12458	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCACTACTGTGTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	8270604	8335754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_8270756_8277219_8277364_8288442_8288616_8318363_8318599_8333899
ENSMUSG00000037674.16_0	chr9	+	7872	9	FSM	ENSMUSG00000037674.16	ENSMUST00000163401.9	7880	9	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGATGTTAAGATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	72439528	72530110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72440263_72484320_72484355_72499032_72499116_72500519_72500643_72514904_72515022_72517585_72517671_72518902_72519111_72522318_72522615_72523918
ENSMUSG00000037679.10_0	chr12	+	3995	23	FSM	ENSMUSG00000037679.10	ENSMUST00000101029.4	4001	23	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTTGCCTGGAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	112555219	112581387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112555330_112566427_112566828_112567762_112567879_112567956_112568117_112568611_112568646_112569514_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577843_112578471_112578981_112579039_112581328
ENSMUSG00000037679.10_2	chr12	+	3887	21	FSM	ENSMUSG00000037679.10	ENST00000675638.1	3903	21	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTGGGCATTGATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	112566446	112581479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112566828_112567762_112567879_112567956_112568117_112569485_112569657_112570145_112570288_112570447_112571297_112571806_112571953_112572227_112572290_112572677_112572781_112573406_112573493_112573928_112574030_112574762_112574834_112574910_112575019_112575281_112575353_112576106_112576228_112576552_112576718_112576895_112576999_112577128_112577291_112577909_112578471_112578981_112579039_112581328
ENSMUSG00000037683.15_0	chr2	+	2033	15	FSM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	0	12	0	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAGGGAGTAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19206575	19301705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_19206627_19240292_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397_19253593_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606
ENSMUSG00000037683.15_16	chr2	+	2220	15	FSM	ENSMUSG00000037683.15	ENST00000376528.8	2234	15	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATTAGAAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19206575	19315025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_19206627_19243451_19243578_19248759_19248829_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_30	chr2	+	1975	14	ISM	ENSMUSG00000037683.15	ENST00000409049.7	2045	15	33724	12	33724	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGAAGGGAGTAAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19240299	19301705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397_19253593_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606
ENSMUSG00000037683.15_36	chr2	+	2653	17	ISM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	33722	14	33722	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATTAGAAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19240297	19315025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397_19253593_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_47	chr2	+	2161	14	ISM	ENSMUSG00000037683.15	ENST00000376528.8	2234	15	36884	14	36884	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATTAGAAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19243459	19315025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_19243578_19248759_19248829_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037683.15_8	chr2	+	2709	18	FSM	ENSMUSG00000037683.15	ENST00000298032.10	2723	18	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATTAGAAAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	19206575	19315025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_19206627_19240292_19240411_19243451_19243578_19248759_19248829_19249353_19249530_19253397_19253593_19258666_19258851_19273883_19274037_19274835_19274942_19290697_19290948_19293635_19293773_19297792_19297962_19300199_19300298_19301133_19301236_19301606_19301723_19305282_19305481_19308606_19308770_19314727
ENSMUSG00000037692.15_1	chr4	+	6360	9	FSM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	0	43	0	11	multi-exon	TRUE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132738849	132804923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132738889_132739135_132739270_132739500_132739599_132782323_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ENSMUSG00000037692.15_12	chr4	+	6315	8	ISM	ENSMUSG00000037692.15	ENST00000673934.1	6403	9	292	43	-222	11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132739141	132804923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_132739270_132739500_132739599_132782323_132782515_132782605_132782826_132788091_132788204_132788337_132788376_132788686_132793589_132804297
ENSMUSG00000037692.15_20	chr4	+	6403	7	FSM	ENSMUSG00000037692.15	ENST00000374011.6	6418	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAGAAATGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132739375	132804909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132739599_132782323_132782515_132782605_132782826_132787986_132788204_132788337_132788376_132788686_132793589_132804297
ENSMUSG00000037697.20_0	chr14	-	9771	14	FSM	ENSMUSG00000037697.20	ENSMUST00000087320.13	9820	14	42	7	42	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCCACATTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	45895476	45825933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45833122_45836558_45836643_45839021_45839214_45840095_45840349_45842509_45842660_45846394_45846471_45847948_45848212_45851619_45851727_45853986_45854094_45856725_45856874_45858168_45858298_45860297_45860400_45867036_45867211_45894678
ENSMUSG00000037703.15_0	chr2	-	3955	6	FSM	ENSMUSG00000037703.15	ENST00000645462.1	3969	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCAATTCTGTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130479953	130474697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130475410_130475540_130477385_130477692_130477825_130477962_130478548_130478862_130479340_130479748
ENSMUSG00000037706.18_0	chr7	+	1516	8	FSM	ENSMUSG00000037706.18	ENSMUST00000037941.10	1533	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	18136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGACTGCCAGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	142606486	142621665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142606804_142616229_142616345_142618945_142619044_142619679_142619755_142619984_142620090_142620397_142620500_142620883_142620971_142621048
ENSMUSG00000037709.14_1	chr6	-	3994	17	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	13719	14	13719	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGCAACAAAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58966771	58910243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960869_58961061_58964140_58964318_58966728
ENSMUSG00000037709.14_17	chr6	-	2227	16	FSM	ENSMUSG00000037709.14	ENST00000513837.5	2233	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCCTACACATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	59001349	58912368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960869_58961061_58964140_58964318_59001296
ENSMUSG00000037709.14_2	chr6	-	4034	18	FSM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGCAACAAAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58980490	58910243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960869_58961061_58964140_58964318_58966728_58966771_58980449
ENSMUSG00000037709.14_3	chr6	-	4223	18	FSM	ENSMUSG00000037709.14	ENST00000395002.6	4242	18	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGCAACAAAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	59001568	58910243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960869_58961061_58964140_58964318_58966728_58966771_58980449_58980492_59001296
ENSMUSG00000037709.14_4	chr6	-	3951	16	ISM	ENSMUSG00000037709.14	ENST00000264344.10	4048	18	16173	14	16173	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGCAACAAAAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58964317	58910243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_58911051_58911398_58912697_58916280_58916383_58917105_58917303_58921105_58921190_58923024_58923121_58930434_58930519_58931186_58931408_58932200_58932283_58933021_58933161_58933638_58933844_58942045_58942194_58950139_58950183_58951015_58951093_58960869_58961061_58964140
ENSMUSG00000037710.9_0	chr10	-	1074	3	FSM	ENSMUSG00000037710.9	ENSMUST00000045887.9	1084	3	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTGTGGCTCTGTAACG	NA	NA	NA	NA	NA	NA	NA	NA	71180775	71166310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_71166957_71172043_71172250_71180553
ENSMUSG00000037712.18_0	chr14	-	3276	15	FSM	ENSMUSG00000037712.18	ENSMUST00000045905.15	3293	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAATGTTTTCTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	45767564	45696257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45697481_45699223_45699366_45699572_45699698_45702180_45702403_45702540_45702648_45704794_45704920_45705959_45706010_45706696_45706832_45710228_45710337_45713029_45713133_45713344_45713571_45719888_45720024_45741953_45742188_45766881_45767049_45767390
ENSMUSG00000037720.17_0	chr5	+	6227	8	FSM	ENSMUSG00000037720.17	ENSMUST00000037918.12	6247	8	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGCAGGTTTAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	67417921	67448798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000037720.17_2	chr5	+	5305	9	FSM	ENSMUSG00000037720.17	ENSMUST00000160352.8	5322	9	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGCAGGTTTAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	67418050	67448798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_67418150_67418306_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438_67443560_67444352
ENSMUSG00000037720.17_5	chr5	+	6149	7	FSM	ENSMUSG00000037720.17	ENSMUST00000161369.3	6164	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAGCAGGTTTAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	67418156	67448798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_67418377_67421072_67421168_67421612_67421801_67424644_67424713_67425853_67425988_67441482_67441567_67443438
ENSMUSG00000037722.9_0	chr14	-	2772	6	FSM	ENSMUSG00000037722.9	ENSMUST00000046191.9	2788	6	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAAGATCCATCAGG	NA	NA	NA	NA	NA	NA	NA	NA	45626406	45613794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45615944_45618393_45618456_45619012_45619141_45620850_45620914_45622037_45622206_45626204
ENSMUSG00000037725.9_0	chr8	-	2574	9	FSM	ENSMUSG00000037725.9	ENSMUST00000046916.9	2593	9	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATACCTGACAGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	22675825	22658184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_22658991_22659728_22659964_22663277_22663348_22665016_22665188_22665770_22665976_22666789_22667596_22667682_22667756_22669529_22669612_22675699
ENSMUSG00000037730.14_0	chr3	+	5553	8	FSM	ENSMUSG00000037730.14	ENSMUST00000192715.6	5555	8	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCACTCACTATTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	30656214	30674021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30666617_30666702_30667700_30667788_30670699
ENSMUSG00000037730.14_2	chr3	+	3385	7	FSM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGAAATCTGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	30656790	30672513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_30656845_30657652_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ENSMUSG00000037730.14_3	chr3	+	3323	6	ISM	ENSMUSG00000037730.14	ENSMUST00000047502.9	3394	7	871	8	871	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGCTAAGAAATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30657656	30672509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_30657950_30661185_30661980_30663133_30663294_30665589_30665769_30667700_30667788_30670699
ENSMUSG00000037736.21_0	chr5	+	1027	7	FSM	ENSMUSG00000037736.21	ENST00000509638.5	1041	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAGCAGTGGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	66903087	67132003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_66903349_67039241_67039312_67111011_67111119_67116930_67116962_67118499_67118611_67126418_67126615_67131752
ENSMUSG00000037740.9_0	chr2	+	4261	4	FSM	ENSMUSG00000037740.9	ENSMUST00000145614.2	4278	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	978	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTTCTCCTTTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	130405671	130410608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130405911_130406000_130406148_130406227_130406352_130406857
ENSMUSG00000037742.15_8	chr9	-	1779	8	FSM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	6	9	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	78389000	78385739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792_78387971_78388920
ENSMUSG00000037742.15_9	chr9	-	1700	7	ISM	ENSMUSG00000037742.15	ENSMUST00000042235.15	1794	8	1035	9	982	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATCTGTGTTGGTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	78387971	78385739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_78386141_78386239_78386475_78386559_78386817_78386905_78387057_78387133_78387431_78387522_78387703_78387792
ENSMUSG00000037747.10_0	chr10	-	2842	5	FSM	ENSMUSG00000037747.10	ENSMUST00000046513.10	2877	5	26	9	26	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTAAATCTTCGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	70435095	70393520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_70395612_70401003_70401122_70404731_70404907_70406652_70406850_70434834
ENSMUSG00000037750.17_0	chr11	+	3231	3	FSM	ENSMUSG00000037750.17	ENSMUST00000073705.12	3258	3	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAGGAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77985493	78047507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77985618_78033918_78034041_78044522
ENSMUSG00000037750.17_2	chr11	+	2448	3	FSM	ENSMUSG00000037750.17	ENSMUST00000100782.4	2473	3	6	19	6	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGTTTGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77985539	78046882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77985618_78033918_78034041_78044634
ENSMUSG00000037750.17_4	chr11	+	3333	3	FSM	ENSMUSG00000037750.17	ENSMUST00000155571.2	3358	3	2	23	2	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTAAAAGAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78006433	78047503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78006664_78033918_78034041_78044522
ENSMUSG00000037750.17_5	chr11	+	3690	3	FSM	ENSMUSG00000037750.17	ENST00000582059.6	3706	3	2	14	2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCAGTAAAACACACC	NA	NA	NA	NA	NA	NA	NA	NA	78006653	78048143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78006713_78033918_78034041_78044634
ENSMUSG00000037750.17_6	chr11	+	3625	2	ISM	ENSMUSG00000037750.17	ENST00000582059.6	3706	3	27270	17	27270	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTATAAAGCAGTAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	78033921	78048140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_78034041_78044634
ENSMUSG00000037752.5_0	chr4	-	4229	3	FSM	ENSMUSG00000037752.5	ENSMUST00000045550.5	4245	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTACAATTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	132459848	132452214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132455882_132458186_132458384_132459483
ENSMUSG00000037759.7_0	chr14	+	475	3	FSM	ENSMUSG00000037759.7	ENST00000557436.1	487	3	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTGAGGATGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45226291	45239442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45226377_45227110_45227265_45239206
ENSMUSG00000037759.7_4	chr14	+	391	2	FSM	ENSMUSG00000037759.7	ENSMUST00000046891.6	3684	2	1458	1835	825	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTGAGGATGCGCTT	NA	NA	NA	NA	NA	NA	NA	NA	45227109	45239442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45227265_45239206
ENSMUSG00000037761.17_0	chr2	+	2392	9	FSM	ENSMUSG00000037761.17	ENSMUST00000045644.9	2402	9	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTATTCTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	158466811	158481125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473601_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ENSMUSG00000037761.17_3	chr2	+	2379	9	NNC	ENSMUSG00000037761.17	novel	2402	9	NA	NA	21	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTTATTCTGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	158466828	158481125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_158467437_158468246_158468477_158469976_158470147_158473382_158473605_158474191_158474375_158477226_158477347_158477927_158478068_158478587_158478721_158480552
ENSMUSG00000037772.14_0	chr7	+	673	5	FSM	ENSMUSG00000037772.14	ENSMUST00000038675.7	692	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	142086760	142094477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142086932_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037772.14_1	chr7	+	580	5	FSM	ENSMUSG00000037772.14	ENSMUST00000210803.2	590	5	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	142086900	142094477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142086979_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037772.14_3	chr7	+	708	5	FSM	ENSMUSG00000037772.14	ENSMUST00000210662.2	736	5	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	142087539	142094477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142087746_142088741_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037772.14_4	chr7	+	489	4	ISM	ENSMUSG00000037772.14	ENSMUST00000210662.2	736	5	1236	7	1236	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGAGCTGGTGGACACT	NA	NA	NA	NA	NA	NA	NA	NA	142088754	142094477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_142088865_142089806_142089890_142091003_142091078_142094255
ENSMUSG00000037773.15_0	chr2	-	3489	7	FSM	ENSMUSG00000037773.15	ENSMUST00000089581.11	3496	7	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAATTGAAGAGTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	130266192	130259603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331
ENSMUSG00000037773.15_2	chr2	-	1668	8	FSM	ENSMUSG00000037773.15	ENSMUST00000110277.2	1689	8	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTGACATTCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	130266597	130260889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130261254_130261549_130261811_130263809_130264057_130264144_130264296_130264385_130264625_130264732_130264813_130265331_130265473_130266412
ENSMUSG00000037784.15_0	chr9	+	3949	16	FSM	ENSMUSG00000037784.15	ENSMUST00000078367.12	3981	16	31	1	-5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99511625	99551308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99511723_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ENSMUSG00000037784.15_2	chr9	+	4325	17	FSM	ENSMUSG00000037784.15	ENSMUST00000112885.9	4350	17	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99511654	99551308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99512016_99514689_99514802_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545578_99545770_99547767_99547908_99549691
ENSMUSG00000037784.15_4	chr9	+	3960	16	FSM	ENSMUSG00000037784.15	ENSMUST00000112886.9	3970	16	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGTCGTTCTTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	99511904	99551308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99512016_99519399_99519976_99521866_99521952_99523786_99523906_99524585_99524748_99529139_99529269_99531607_99531671_99532966_99533108_99536912_99536944_99537630_99537685_99541685_99541829_99542974_99543159_99544993_99545211_99545581_99545770_99547767_99547908_99549691
ENSMUSG00000037787.15_0	chr12	+	1038	5	FSM	ENSMUSG00000037787.15	ENSMUST00000040519.12	1065	5	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAAAAGAATTTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	111679702	111700635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111679853_111689045_111689244_111690773_111690838_111696455_111696547_111700100
ENSMUSG00000037788.15_0	chr6	-	2881	5	FSM	ENSMUSG00000037788.15	ENSMUST00000127485.8	2908	5	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCAGCTTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	57802100	57704797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_57707216_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUSG00000037788.15_1	chr6	-	2899	5	FSM	ENSMUSG00000037788.15	ENSMUST00000114297.5	2919	5	16	4	-7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATATGCTGTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57802128	57729253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_57731662_57739419_57739557_57751695_57751774_57766961_57767021_57801911
ENSMUSG00000037791.16_0	chr11	+	3041	11	FSM	ENSMUSG00000037791.16	ENSMUST00000108360.8	3047	11	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGGGGAGTTTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	77873585	77917040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916763
ENSMUSG00000037791.16_1	chr11	+	4400	15	FSM	ENSMUSG00000037791.16	ENSMUST00000049167.14	4410	15	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATGTTTTCTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	77873631	77921359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77874204_77874841_77875024_77897552_77897626_77900226_77900621_77903996_77904118_77906323_77906457_77908890_77909056_77913183_77913343_77913852_77914646_77915786_77915913_77916710_77916855_77918145_77918245_77919052_77919136_77919668_77919808_77920142
ENSMUSG00000037795.15_0	chr5	+	9048	20	FSM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAGTCCAGTGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	65920863	65987444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65920934_65928729_65928785_65932927_65933007_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ENSMUSG00000037795.15_1	chr5	+	8980	19	ISM	ENSMUSG00000037795.15	ENSMUST00000201489.4	9055	20	7864	7	7265	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACAGTCCAGTGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	65928727	65987444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_65928785_65932927_65933007_65943448_65943705_65945395_65945485_65947360_65948514_65950671_65950797_65951863_65951953_65955433_65955511_65960763_65960911_65963532_65965887_65966497_65966584_65967106_65967153_65969305_65969494_65972094_65972214_65974504_65974641_65977612_65977802_65979150_65979320_65982614_65982739_65983947
ENSMUSG00000037801.14_1	chr9	-	2926	11	FSM	ENSMUSG00000037801.14	ENST00000358767.7	2938	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGCTTTTGTTTAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	63432485	63328156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63329252_63332639_63332749_63352755_63352872_63361841_63362013_63387789_63388077_63389848_63389970_63403325_63403518_63415527_63415704_63419518_63419603_63431186_63431254_63431977
ENSMUSG00000037805.16_0	chr17	+	816	6	FSM	ENSMUSG00000037805.16	ENSMUST00000042334.16	830	6	8	6	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28547452	28550001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28547593_28547784_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUSG00000037805.16_3	chr17	+	724	6	FSM	ENSMUSG00000037805.16	ENSMUST00000233427.2	729	6	0	5	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCAGCCTTGGTGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	28547541	28550001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28547593_28547787_28547860_28547940_28548022_28548347_28548497_28549498_28549672_28549803
ENSMUSG00000037808.14_0	chr9	+	3693	10	FSM	ENSMUSG00000037808.14	ENSMUST00000059579.12	3702	10	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGACTGTGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	13739018	13757835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13739358_13740055_13740121_13741020_13741076_13742277_13742434_13744267_13744468_13747180_13747229_13747398_13747480_13748132_13748269_13750935_13751038_13755324
ENSMUSG00000037813.14_0	chr2	-	3545	12	FSM	ENSMUSG00000037813.14	ENST00000279024.9	3560	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGACCTGAACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	158062516	158037882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_158038574_158042073_158042287_158042880_158043004_158044992_158045132_158046579_158046729_158047620_158047720_158050332_158050508_158053528_158053634_158055282_158055407_158057747_158057931_158058352_158059698_158062317
ENSMUSG00000037815.8_1	chr18	+	3716	18	FSM	ENSMUSG00000037815.8	ENSMUST00000042345.8	3733	18	11	6	11	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGAAGCAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	35251922	35387826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35252035_35285653_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUSG00000037815.8_17	chr18	+	3486	17	FSM	ENSMUSG00000037815.8	ENST00000518825.5	3495	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCAAAGAAGCCTGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	35285662	35387650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35285761_35287397_35287594_35307305_35307473_35308149_35308270_35312737_35313008_35315402_35315607_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385814_35386600
ENSMUSG00000037815.8_26	chr18	+	2604	12	FSM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAACCAAGTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35348390	35387816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35348465_35355117_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUSG00000037815.8_32	chr18	+	2530	11	ISM	ENSMUSG00000037815.8	ENST00000540387.5	2616	12	6731	8	6731	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGAACCAAGTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	35355117	35387816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_35355199_35356475_35356629_35368660_35368754_35372435_35372593_35377007_35377209_35377749_35377902_35382754_35382866_35383898_35384081_35384218_35384325_35385668_35385804_35386657
ENSMUSG00000037816.11_0	chr13	+	1790	10	FSM	ENSMUSG00000037816.11	ENSMUST00000046974.5	1798	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGAGACACATTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	50571907	50587805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_50572024_50573875_50573914_50577237_50577399_50577787_50577907_50579592_50579803_50580657_50580817_50585575_50585787_50586206_50586383_50586463_50586592_50587333
ENSMUSG00000037818.17_0	chr3	+	980	6	FSM	ENSMUSG00000037818.17	ENSMUST00000203892.2	1021	6	15	26	15	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAACAAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	40848794	40871829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40848879_40859320_40859429_40860306_40860392_40864937_40865039_40871120_40871200_40871306
ENSMUSG00000037820.16_0	chr2	-	3573	13	FSM	ENSMUSG00000037820.16	ENSMUST00000103122.10	3596	13	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTCAAACAAGGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	157988342	157958330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_157959872_157960766_157960904_157962044_157962206_157966040_157966311_157969031_157969275_157970558_157970663_157971242_157971379_157973250_157973429_157974348_157974478_157976170_157976290_157980626_157980870_157984914_157985095_157988210
ENSMUSG00000037822.13_0	chr5	-	4539	5	FSM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACACTTCGTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	65650729	65604193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650078
ENSMUSG00000037822.13_3	chr5	-	1031	5	FSM	ENSMUSG00000037822.13	ENSMUST00000121661.8	1056	5	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATATAGTGGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65650388	65607155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65607781_65610528_65610672_65617866_65617916_65625735_65625845_65650283
ENSMUSG00000037822.13_4	chr5	-	425	1	ISM	ENSMUSG00000037822.13	ENSMUST00000139122.8	4560	5	42969	3163	10138	0	mono-exon	FALSE	NA	NA	NA	NA	NA	394	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTGACAGAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	65607774	65607349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_65607300_65607800
ENSMUSG00000037822.13_5	chr5	-	477	2	FSM	ENSMUSG00000037822.13	ENST00000511809.5	477	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTGACAGAGCCACAC	NA	NA	NA	NA	NA	NA	NA	NA	65617912	65607349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65607781_65617866
ENSMUSG00000037824.7_0	chr14	-	2424	8	FSM	ENSMUSG00000037824.7	ENSMUST00000224209.2	2477	8	40	13	-2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCATTAAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	40656238	40628416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144
ENSMUSG00000037824.7_1	chr14	-	2464	9	FSM	ENSMUSG00000037824.7	ENSMUST00000047652.6	2475	9	0	11	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTAAGCATTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	40688764	40628412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40640586_40640638_40656144_40656243_40688732
ENSMUSG00000037824.7_3	chr14	-	2331	7	FSM	ENSMUSG00000037824.7	ENST00000372164.7	2338	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCTTTCTGGTTTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	40656229	40628449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40637336_40637508_40638759_40638907_40656144
ENSMUSG00000037824.7_5	chr14	-	940	7	FSM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCCCTTATGGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	40656230	40629721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40638759_40638907_40640586_40640638_40656144
ENSMUSG00000037824.7_6	chr14	-	853	6	ISM	ENSMUSG00000037824.7	ENST00000341863.10	948	7	15598	4	15598	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGGCCCTTATGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	40640638	40629723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40638759_40638907_40640586
ENSMUSG00000037824.7_8	chr14	-	781	6	FSM	ENSMUSG00000037824.7	ENST00000481124.5	799	6	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGAATGTGTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	40688830	40629792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_40630087_40631541_40631662_40633069_40633115_40635318_40635445_40656144_40656243_40688732
ENSMUSG00000037826.6_1	chr6	-	1080	5	FSM	ENSMUSG00000037826.6	ENST00000295908.11	1098	5	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2887	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGGTAACACACAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	57502204	57487649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_57487835_57491958_57492104_57492577_57492744_57499733_57499835_57501721
ENSMUSG00000037827.6_0	chr6	+	2246	1	FSM	ENSMUSG00000037827.6	ENSMUST00000036712.6	1479	1	-65	-702	-65	702	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CCAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128621810	128624056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_128621800_128624100
ENSMUSG00000037845.15_0	chr9	+	2648	5	FSM	ENSMUSG00000037845.15	ENSMUST00000042391.13	2658	5	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACATAGTGGAGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	50679539	50684642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50679756_50679987_50680145_50681409_50681614_50681931_50682091_50682730
ENSMUSG00000037846.19_0	chr10	+	3959	12	FSM	ENSMUSG00000037846.19	ENSMUST00000118160.8	3970	12	7	4	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCTTCTGATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	67815406	67879694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_67815643_67823136_67823343_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841525_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUSG00000037846.19_1	chr10	+	3058	12	FSM	ENSMUSG00000037846.19	ENST00000373789.8	3076	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAAACTTCCCAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	67815528	67878929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_67815643_67823136_67823334_67833394_67833454_67837753_67837808_67839033_67839152_67841329_67841520_67853635_67853731_67861342_67861450_67862347_67862480_67871618_67871782_67875860_67875969_67877208
ENSMUSG00000037847.15_10	chr19	+	376	4	ISM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	367	12	367	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGCAAAATGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	18617247	18622488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_18617299_18618487_18618636_18619537_18619645_18622418
ENSMUSG00000037847.15_2	chr19	+	1907	9	FSM	ENSMUSG00000037847.15	ENSMUST00000237347.2	1940	9	26	7	-22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGATCTTCTCAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	18609339	18629785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_18609446_18613442_18613507_18616881_18616973_18617249_18617299_18618487_18618636_18618766_18618839_18619537_18619645_18622418_18622503_18628599
ENSMUSG00000037847.15_8	chr19	+	460	5	FSM	ENSMUSG00000037847.15	ENST00000376808.8	478	5	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAGCAAAATGGTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	18616886	18622488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_18616973_18617249_18617299_18618487_18618636_18619537_18619645_18622418
ENSMUSG00000037851.14_0	chr13	+	4388	34	FSM	ENSMUSG00000037851.14	ENSMUST00000165316.8	4426	34	30	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	49835605	49887735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49835680_49840861_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUSG00000037851.14_25	chr13	+	4307	33	FSM	ENSMUSG00000037851.14	ENSMUST00000164260.8	3789	33	0	-518	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTGTGTTGGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	49840868	49887735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49840988_49841632_49841790_49841999_49842120_49843923_49844007_49844969_49845088_49846499_49846648_49855319_49855408_49855963_49856025_49856642_49856739_49857746_49857870_49858308_49858401_49859262_49859362_49860154_49860282_49861881_49861956_49863054_49863250_49865225_49865313_49868289_49868374_49869160_49869306_49871381_49871503_49873053_49873146_49874556_49874635_49875621_49875744_49876145_49876249_49876468_49876553_49878093_49878269_49878696_49878810_49879634_49879731_49880602_49880780_49882134_49882241_49883490_49883617_49884893_49885038_49885815_49885969_49887134
ENSMUSG00000037852.9_0	chr8	-	2081	9	FSM	ENSMUSG00000037852.9	ENSMUST00000048967.9	2117	9	11	25	11	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	2955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAGGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65146077	65045600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_65046256_65047930_65048050_65050493_65050594_65059636_65059777_65062081_65062265_65064407_65064526_65070571_65070740_65072384_65072582_65145676
ENSMUSG00000037855.16_0	chr10	-	4242	5	FSM	ENSMUSG00000037855.16	ENSMUST00000064656.8	4259	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAACACTTTGGTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	67748482	67721939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67724922_67725782_67725821_67733263_67733445_67745030_67745790_67748200
ENSMUSG00000037857.17_1	chr11	+	541	3	FSM	ENSMUSG00000037857.17	ENST00000579665.1	562	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1979	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAATATATATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	77577006	77600689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77577334_77596334_77596368_77600508
ENSMUSG00000037860.16_0	chr1	+	2821	12	FSM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	2	16	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGTTAGAAAAAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	173178446	173293590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_173178540_173221528_173221600_173247022_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037860.16_2	chr1	+	2726	11	ISM	ENSMUSG00000037860.16	ENSMUST00000147604.8	2839	12	43082	20	43082	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTCAGAAAGTTAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	173221526	173293586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_173221600_173247022_173247122_173248136_173248253_173255324_173255465_173280393_173280515_173281789_173281880_173282899_173283182_173287263_173287416_173289472_173289887_173291424_173291614_173292536
ENSMUSG00000037868.16_0	chr10	+	2947	2	FSM	ENSMUSG00000037868.16	ENSMUST00000048289.14	2965	2	11	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATATTCTGGTTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	67373709	67378011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_67374220_67375574
ENSMUSG00000037876.18_0	chr10	+	8357	26	FSM	ENSMUSG00000037876.18	ENSMUST00000174408.8	8377	26	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGAAGCTGGATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	66963050	67092091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_66963202_66993685_66993851_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ENSMUSG00000037876.18_10	chr10	+	8081	25	FSM	ENSMUSG00000037876.18	ENST00000542921.5	8098	25	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCACAGCAGTCACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	67021682	67091728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_67022086_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ENSMUSG00000037876.18_6	chr10	+	8588	25	FSM	ENSMUSG00000037876.18	ENSMUST00000173689.8	8609	25	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGAAGCTGGATGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	67021543	67092091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_67022091_67025514_67025629_67051048_67051155_67052761_67052887_67053816_67053961_67054055_67054249_67054732_67056415_67059787_67059961_67060515_67062699_67065626_67065829_67067750_67067966_67069149_67069303_67073886_67073977_67074585_67074714_67075027_67075239_67075640_67075856_67076441_67076721_67079550_67079720_67080561_67080653_67081284_67081416_67081812_67081936_67083789_67083930_67085408_67085586_67090230_67090363_67091226
ENSMUSG00000037885.19_0	chr2	+	2847	4	FSM	ENSMUSG00000037885.19	ENSMUST00000165413.9	2882	4	34	1	34	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGGCCCATGTAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	129642470	129670893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129642767_129643323_129643925_129652407_129653158_129669693
ENSMUSG00000037885.19_1	chr2	+	5421	3	FSM	ENSMUSG00000037885.19	ENSMUST00000166282.3	5445	3	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAAAATGAGTGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129642451	129674198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129642767_129643323_129643925_129669693
ENSMUSG00000037887.12_0	chr7	-	4789	7	FSM	ENSMUSG00000037887.12	ENSMUST00000039926.10	4804	7	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCTCTGCTGACTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	141648995	141633227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141636768_141637004_141637129_141637328_141637489_141638089_141638257_141642100_141642240_141643680_141644004_141648659
ENSMUSG00000037890.14_0	chr5	+	6267	36	FSM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	6	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGATACATCTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	65357044	65417743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65357104_65359902_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
ENSMUSG00000037890.14_3	chr5	+	6195	35	ISM	ENSMUSG00000037890.14	ENSMUST00000203653.3	6279	36	2877	6	2875	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGATACATCTAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	65359915	65417743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_65359995_65360294_65360361_65363752_65363879_65370157_65370274_65373145_65373262_65377778_65377860_65378961_65379075_65379332_65379507_65380371_65380443_65380853_65381027_65381111_65381227_65382030_65382138_65382633_65382757_65384386_65384537_65385528_65385677_65385798_65386004_65388298_65388459_65388620_65388732_65391439_65391550_65396900_65396959_65398197_65398339_65398414_65398498_65398855_65398940_65400661_65400809_65401462_65401588_65403138_65403252_65404803_65404873_65406132_65406211_65408241_65408339_65409621_65409747_65412393_65412476_65413623_65413775_65414344_65414469_65415078_65415156_65415446
ENSMUSG00000037892.14_0	chr3	-	5141	4	FSM	ENSMUSG00000037892.14	ENSMUST00000035931.13	5168	4	16	11	-15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAGCCAAGCTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	49711749	49697755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_49699724_49707732_49707897_49707988_49708075_49708826
ENSMUSG00000037892.14_2	chr3	-	1476	5	FSM	ENSMUSG00000037892.14	ENST00000510305.5	1486	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATACATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	49711726	49698874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_49699724_49707732_49707897_49707988_49708078_49708826_49708956_49711481
ENSMUSG00000037894.14_0	chr3	+	1052	5	FSM	ENSMUSG00000037894.14	ENSMUST00000041045.14	1069	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATAACCCCGTGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	137570256	137572675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137570458_137570893_137570972_137571280_137571395_137571771_137571902_137572146
ENSMUSG00000037896.18_0	chr12	+	5657	12	FSM	ENSMUSG00000037896.18	ENSMUST00000084968.14	5684	12	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAACAACGTAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	111005795	111082319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111006323_111006395_111006456_111048157_111048242_111059514_111059568_111063888_111064051_111066353_111066473_111068063_111068143_111070044_111070240_111075005_111075084_111075287_111075346_111076214_111076445_111078307
ENSMUSG00000037902.19_1	chr2	+	829	3	FSM	ENSMUSG00000037902.19	ENST00000381580.5	845	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGCACGACCAACAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	129450906	129458386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129451174_129457366_129457685_129458142
ENSMUSG00000037902.19_2	chr2	+	578	2	FSM	ENSMUSG00000037902.19	ENST00000216927.4	596	2	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGATGTCCTTGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	129450911	129457682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_129451174_129457366
ENSMUSG00000037904.15_0	chr12	-	2568	3	FSM	ENSMUSG00000037904.15	ENSMUST00000128353.8	2577	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGATCCTTCGTCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	110945469	110941790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110943983_110944381_110944562_110945273
ENSMUSG00000037904.15_1	chr12	-	1683	3	FSM	ENSMUSG00000037904.15	ENSMUST00000043459.13	1706	3	17	6	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTACAGAGGGATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	110945438	110942866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110944205_110944381_110944562_110945273
ENSMUSG00000037904.15_2	chr12	-	1553	4	FSM	ENSMUSG00000037904.15	ENSMUST00000135131.2	1563	4	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTACAGAGGGATCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	110945423	110942866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110943983_110944097_110944205_110944381_110944562_110945273
ENSMUSG00000037905.14_0	chr5	+	6452	3	FSM	ENSMUSG00000037905.14	ENSMUST00000049040.14	6473	3	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1075	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGACTCCTGGATGG	NA	NA	NA	NA	NA	NA	NA	NA	125518645	125537427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_125518957_125528733_125528837_125531389
ENSMUSG00000037907.17_0	chr11	-	3089	15	FSM	ENSMUSG00000037907.17	ENSMUST00000037593.14	3105	15	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGATGCATTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	77380484	77361318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77362650_77363127_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264
ENSMUSG00000037907.17_2	chr11	-	3292	16	FSM	ENSMUSG00000037907.17	ENSMUST00000092892.10	3336	16	38	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGATGCATTTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	77380466	77361318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77362705_77362839_77363006_77363127_77363205_77363274_77363439_77363550_77363704_77363836_77363995_77364106_77364238_77364405_77364471_77365348_77365431_77367008_77367076_77367152_77367343_77367427_77367572_77368116_77368163_77368245_77368371_77368468_77368605_77380264
ENSMUSG00000037916.15_5	chr19	-	1644	10	FSM	ENSMUSG00000037916.15	ENSMUST00000042497.14	1661	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4062795	4057502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4061345_4061429_4062550
ENSMUSG00000037916.15_7	chr19	-	1418	9	FSM	ENSMUSG00000037916.15	ENSMUST00000134479.8	1438	9	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTTGTCTGGAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4062652	4057502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4057666_4057769_4057916_4058047_4058130_4058342_4058510_4058593_4058807_4059343_4059534_4059825_4060010_4061101_4061273_4062550
ENSMUSG00000037922.14_0	chr3	-	1945	12	FSM	ENSMUSG00000037922.14	ENST00000428908.5	1957	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACCTTTGAAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	135940473	135759416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763152_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374
ENSMUSG00000037922.14_1	chr3	-	2772	16	FSM	ENSMUSG00000037922.14	ENST00000444316.2	2785	16	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACCTTTGAAATGTACT	NA	NA	NA	NA	NA	NA	NA	NA	135990008	135759416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135759908_135760166_135760232_135761510_135761564_135763152_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374_135940481_135948674_135948815_135953392_135953532_135960633_135960786_135989619
ENSMUSG00000037922.14_19	chr3	-	1366	10	FSM	ENSMUSG00000037922.14	ENST00000508653.5	1374	10	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACAACAGTCCATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	135940477	135761537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_135761564_135763152_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374
ENSMUSG00000037922.14_24	chr3	-	1333	9	ISM	ENSMUSG00000037922.14	ENST00000508653.5	1374	10	15	1615	15	-1615	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAGGATTAAAACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	135940468	135763150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_135763187_135769873_135769938_135772086_135772266_135788930_135789000_135799045_135799352_135806041_135806351_135809610_135809690_135919590_135919788_135940374
ENSMUSG00000037926.16_0	chr11	+	218	2	FSM	ENSMUSG00000037926.16	ENST00000582084.1	231	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCCCTCCAGGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	77107003	77107341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77107119_77107238
ENSMUSG00000037926.16_3	chr11	+	4450	14	FSM	ENSMUSG00000037926.16	ENST00000649863.1	4463	14	13	0	13	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAGGTGGTGTAATATG	NA	NA	NA	NA	NA	NA	NA	NA	77239131	77346346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307243_77307310_77308291_77308358_77312041_77312237_77316126_77316221_77316348_77316478_77320611_77320659_77328451_77328599_77332683_77332885_77340213_77341049_77344215
ENSMUSG00000037926.16_6	chr11	+	571	6	FSM	ENSMUSG00000037926.16	ENST00000324677.12	590	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGGTAAGATGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	77239228	77308351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77239380_77283875_77283980_77289030_77289096_77298951_77299074_77307240_77307310_77308291
ENSMUSG00000037933.17_0	chr13	+	4482	9	FSM	ENSMUSG00000037933.17	ENSMUST00000110084.4	4488	9	0	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACATGCGTGCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	49495066	49540495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49495118_49495221_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037933.17_5	chr13	+	4563	8	FSM	ENSMUSG00000037933.17	ENSMUST00000110085.11	4588	8	16	9	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGCACATGCGTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	49495087	49540493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49495387_49522904_49523118_49528692_49528846_49531365_49531828_49532483_49533510_49534046_49534199_49536518_49536730_49538446
ENSMUSG00000037935.17_0	chr11	-	2893	11	FSM	ENSMUSG00000037935.17	ENSMUST00000103133.4	2919	11	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATTAAGACAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	99121834	99099889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99119100_99119145_99119322_99119375_99121227
ENSMUSG00000037935.17_16	chr11	-	1160	8	FSM	ENSMUSG00000037935.17	ENST00000578044.6	1181	8	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGAGTAAATGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	99121319	99100906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99121227
ENSMUSG00000037935.17_28	chr11	-	922	7	ISM	ENSMUSG00000037935.17	ENST00000642459.1	1000	8	1923	8	1919	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAACCGCCTCCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	99119375	99103947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119322
ENSMUSG00000037935.17_29	chr11	-	989	8	FSM	ENSMUSG00000037935.17	ENST00000642459.1	1000	8	3	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAACCGCCTCCTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	99121295	99103947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99119322_99119375_99121227
ENSMUSG00000037935.17_5	chr11	-	1359	8	ISM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	5330	1	5330	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCAACGTCTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	99115964	99100716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863
ENSMUSG00000037935.17_6	chr11	-	1428	9	FSM	ENSMUSG00000037935.17	ENST00000431889.6	1431	9	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCTCAACGTCTGAAACC	NA	NA	NA	NA	NA	NA	NA	NA	99121292	99100716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_99101104_99103945_99104157_99104859_99104962_99105939_99106113_99110045_99110218_99110440_99110573_99111480_99111562_99115863_99115969_99121227
ENSMUSG00000037936.16_0	chr5	-	2506	13	FSM	ENSMUSG00000037936.16	ENSMUST00000086075.13	2521	13	6	9	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACAACACTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125418152	125354159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125354930_125358168_125358298_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUSG00000037936.16_1	chr5	-	2349	12	FSM	ENSMUSG00000037936.16	ENSMUST00000111390.8	2367	12	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACAACACTGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	125418124	125354159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_125354930_125360962_125361110_125361744_125361797_125364422_125364497_125366700_125366820_125371061_125371229_125374289_125374406_125375696_125375793_125377400_125377605_125380145_125380288_125381258_125381417_125417820
ENSMUSG00000037938.5_1	chr2	+	1317	4	FSM	ENSMUSG00000037938.5	ENSMUST00000035481.5	1325	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTAGGTTTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128971627	128976054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128971778_128972097_128972239_128972320_128972487_128975194
ENSMUSG00000037946.12_0	chr13	-	4617	17	ISM	ENSMUSG00000037946.12	ENSMUST00000048716.11	3519	18	968	-1545	968	-11	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCCTAATGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	49451528	49415040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_49417512_49418114_49418256_49420066_49420208_49421708_49421832_49427185_49427249_49428390_49428499_49429085_49429117_49431012_49431093_49431989_49432083_49433527_49433675_49434692_49434752_49435292_49435432_49439169_49439327_49440761_49440899_49443039_49443130_49449806_49450298_49451382
ENSMUSG00000037946.12_1	chr13	-	4687	18	FSM	ENSMUSG00000037946.12	ENSMUST00000110087.9	4698	18	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCCTAATGACATGGC	NA	NA	NA	NA	NA	NA	NA	NA	49462716	49415040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49417512_49418114_49418256_49420066_49420208_49421708_49421832_49427185_49427249_49428390_49428499_49429085_49429117_49431012_49431093_49431989_49432083_49433527_49433675_49434692_49434752_49435292_49435432_49439169_49439327_49440761_49440899_49443039_49443130_49449806_49450298_49451382_49451539_49462656
ENSMUSG00000037946.12_3	chr13	-	3513	18	FSM	ENSMUSG00000037946.12	ENSMUST00000048716.11	3519	18	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAACCCCATCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	49452490	49416585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49417512_49418114_49418256_49420066_49420208_49421708_49421832_49427185_49427249_49428390_49428499_49429085_49429117_49431012_49431093_49431989_49432083_49433527_49433675_49434692_49434752_49435292_49435432_49439169_49439327_49440761_49440899_49443039_49443130_49449806_49450298_49451382_49451539_49452059
ENSMUSG00000037946.12_4	chr13	-	2592	15	FSM	ENSMUSG00000037946.12	ENSMUST00000110086.2	2628	15	28	8	28	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTGTAAAGACAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	49473759	49426865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49427249_49428390_49428499_49429085_49429117_49431012_49431093_49431989_49432083_49433527_49433675_49434692_49434752_49435292_49435432_49439169_49439327_49440761_49440899_49443039_49443130_49449806_49450298_49451382_49451539_49469858_49470039_49473418
ENSMUSG00000037949.9_0	chr9	-	2641	13	FSM	ENSMUSG00000037949.9	ENSMUST00000042546.4	2653	13	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACTTGGCAAATGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122123482	122004944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122005545_122030836_122030954_122080212_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122101432_122101631_122104576_122104730_122123369
ENSMUSG00000037949.9_11	chr9	-	1600	9	FSM	ENSMUSG00000037949.9	ENST00000396091.7	1609	9	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAAGTCAAAGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	122104720	122080216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122080342_122082001_122082194_122086121_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122104576
ENSMUSG00000037957.15_0	chr12	+	2569	4	FSM	ENSMUSG00000037957.15	ENST00000335263.9	2586	4	11	6	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATACTATTTGTTTATCC	NA	NA	NA	NA	NA	NA	NA	NA	110704414	110770667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110704712_110745729_110745913_110759547_110760808_110769838
ENSMUSG00000037957.15_3	chr12	+	2372	3	FSM	ENSMUSG00000037957.15	ENSMUST00000095410.8	2384	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGCAGTTTGTAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	110704431	110761456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_110704712_110745729_110745913_110759547
ENSMUSG00000037958.14_0	chr11	-	3045	6	ISM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	1696	7	1696	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAACCTGACATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76967565	76935124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479
ENSMUSG00000037958.14_1	chr11	-	3107	7	FSM	ENSMUSG00000037958.14	ENSMUST00000102494.8	3114	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAACCTGACATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76969261	76935124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76937581_76939178_76939288_76940098_76940307_76941409_76941539_76945769_76945827_76967479_76967571_76969204
ENSMUSG00000037960.12_0	chr13	-	792	6	FSM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCACCTGCCTGTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	49369496	49356432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479_49361623_49369412
ENSMUSG00000037960.12_1	chr13	-	711	5	ISM	ENSMUSG00000037960.12	ENSMUST00000048946.7	804	6	7877	6	7877	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCACCTGCCTGTCGAA	NA	NA	NA	NA	NA	NA	NA	NA	49361625	49356432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_49356712_49357193_49357266_49357404_49357465_49358667_49358822_49361479
ENSMUSG00000037965.16_0	chr16	-	3806	23	FSM	ENSMUSG00000037965.16	ENSMUST00000037633.16	3825	23	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTTGGTGTGGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	10994241	10954458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10955350_10956884_10957049_10958580_10958715_10959526_10959636_10963043_10963150_10963509_10963644_10964230_10964308_10965132_10965315_10966308_10966410_10967074_10967272_10968458_10968621_10969002_10969190_10969729_10969795_10970922_10971128_10973883_10974165_10974391_10974426_10976417_10976457_10976546_10976628_10976829_10976989_10978867_10979066_10980503_10980544_10982455_10982558_10994083
ENSMUSG00000037966.16_0	chr13	+	1179	4	FSM	ENSMUSG00000037966.16	ENSMUST00000049022.15	1187	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGGGTTCCATGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	49340968	49349720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49341114_49347211_49347441_49348369_49348534_49349079
ENSMUSG00000037971.11_0	chr9	-	2068	4	FSM	ENSMUSG00000037971.11	ENSMUST00000042468.9	2082	4	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGGAGAGAGAGAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	50679747	50674136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50675317_50675523_50675591_50675995_50676227_50679157
ENSMUSG00000037972.8_0	chr16	+	2858	2	FSM	ENSMUSG00000037972.8	ENSMUST00000089011.6	2872	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCCAATGTACAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	10884199	10892841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_10884312_10890095
ENSMUSG00000037977.7_0	chr9	+	513	4	FSM	ENSMUSG00000037977.7	ENST00000441239.5	526	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTCAGGACCAGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	107219555	107225309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107219729_107223344_107223371_107224016_107224165_107225143
ENSMUSG00000037979.14_0	chr5	-	2436	4	FSM	ENSMUSG00000037979.14	ENSMUST00000036206.14	2473	4	15	22	15	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATCTTAAAAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	124939473	124911503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124913356_124916006_124916049_124916724_124916872_124939078
ENSMUSG00000037992.17_0	chr11	+	2453	9	FSM	ENSMUSG00000037992.17	ENSMUST00000107475.9	2469	9	9	7	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACATTTATACTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98828532	98864981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98828706_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_1	chr11	+	2925	7	FSM	ENSMUSG00000037992.17	ENST00000425707.7	2938	7	7	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATAATGCCTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98828547	98865759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98828706_98841070_98841622_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_3	chr11	+	3119	9	FSM	ENSMUSG00000037992.17	ENSMUST00000164748.8	3129	9	1	9	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATAATGCCTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98830537	98865759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98830599_98841070_98841622_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_5	chr11	+	1965	8	FSM	ENSMUSG00000037992.17	ENST00000394086.7	1978	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACATTTATACTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	98850560	98864981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98850797_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037992.17_8	chr11	+	3229	8	FSM	ENSMUSG00000037992.17	ENSMUST00000107473.3	3238	8	0	9	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATAATGCCTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	98851237	98865759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98851960_98857172_98857322_98858870_98859013_98860982_98861144_98861318_98861496_98862407_98862613_98863337_98863497_98864245
ENSMUSG00000037993.9_0	chr8	-	4452	27	FSM	ENSMUSG00000037993.9	ENSMUST00000042601.9	4463	27	5	6	5	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATATTATTGCATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	110292488	110274648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288040_110288580_110288769_110289075_110289416_110292122
ENSMUSG00000037993.9_2	chr8	-	4070	26	FSM	ENSMUSG00000037993.9	ENST00000268482.8	4086	26	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTACAATATTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	110289408	110274654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110275116_110276405_110276528_110278194_110278291_110278699_110278826_110278988_110279124_110279221_110279378_110279721_110279877_110279976_110280186_110280779_110280893_110281275_110281384_110281544_110281662_110281751_110281863_110282271_110282413_110282651_110282838_110282988_110283176_110283505_110283644_110284829_110284943_110285275_110285384_110285550_110285713_110286169_110286326_110286717_110286795_110286969_110287089_110287199_110287348_110287931_110288037_110288580_110288769_110289075
ENSMUSG00000037997.13_0	chr6	+	3721	9	FSM	ENSMUSG00000037997.13	ENSMUST00000039680.7	3746	9	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGTGCTTCTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127430709	127471223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_127430786_127444994_127445116_127447664_127447794_127448510_127448632_127451198_127451275_127454806_127454880_127454961_127455093_127466888_127467041_127468381
ENSMUSG00000037999.14_0	chr5	-	7296	33	FSM	ENSMUSG00000037999.14	ENSMUST00000076623.8	7306	33	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAATATGCCTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62923460	62759794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_62762000_62763417_62763553_62769046_62769111_62771336_62771373_62772346_62772430_62779181_62779310_62787475_62787605_62793294_62793413_62796304_62796380_62798670_62798740_62800137_62800286_62803525_62803632_62807031_62807245_62811388_62811553_62826131_62826196_62826369_62826569_62827222_62827326_62828278_62828424_62833294_62833430_62833854_62834030_62834444_62834628_62835287_62835374_62840697_62840898_62842903_62843020_62855583_62855763_62863950_62864072_62872075_62872146_62887863_62888218_62890312_62890405_62891242_62891320_62892330_62892390_62906118_62907160_62923236
ENSMUSG00000038000.11_0	chr8	-	3137	11	FSM	ENSMUSG00000038000.11	ENSMUST00000042608.8	3154	11	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTGTAGTAATGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	106427706	106423057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106424961_106425039_106425132_106425245_106425596_106426026_106426124_106426210_106426363_106426492_106426528_106426635_106426681_106426913_106426991_106427078_106427173_106427334_106427472_106427551
ENSMUSG00000038002.10_0	chr17	-	7664	21	FSM	ENSMUSG00000038002.10	ENSMUST00000233774.2	7674	21	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAATGTCTGTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25234758	25180205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202917_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661_25233000_25234503
ENSMUSG00000038002.10_1	chr17	-	7502	21	FSM	ENSMUSG00000038002.10	ENSMUST00000073337.8	7519	21	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAATGTCTGTCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	25234193	25180205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202917_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661_25233000_25234100
ENSMUSG00000038002.10_3	chr17	-	7415	20	ISM	ENSMUSG00000038002.10	ENSMUST00000073337.8	7519	21	1203	2	1203	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTGTCTTTTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25233001	25180201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_25183921_25187899_25188046_25189388_25189554_25190350_25190583_25191309_25191376_25192054_25192234_25192477_25192583_25193678_25193761_25196305_25196381_25196469_25196652_25198459_25198638_25201197_25202371_25202917_25203000_25203948_25204073_25204495_25204582_25211243_25211293_25213559_25213644_25216426_25216581_25222185_25222380_25232661
ENSMUSG00000038005.16_0	chr8	+	484	3	FSM	ENSMUSG00000038005.16	ENSMUST00000146863.2	531	3	34	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTTTATAATACGGCT	NA	NA	NA	NA	NA	NA	NA	NA	61343485	61360596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61343571_61358581_61358755_61360370
ENSMUSG00000038005.16_1	chr8	+	1176	8	FSM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	6	9	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	61343490	61360605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_61343571_61346734_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038005.16_3	chr8	+	1099	7	ISM	ENSMUSG00000038005.16	ENSMUST00000037190.15	1191	8	3247	9	3247	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATACGGCTCTTCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	61346731	61360605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_61346895_61348494_61348685_61349771_61349871_61353117_61353269_61357033_61357122_61358581_61358755_61360370
ENSMUSG00000038010.10_0	chr10	+	2435	16	FSM	ENSMUSG00000038010.10	ENSMUST00000036576.10	2455	16	18	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATAGTAGAGTCCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	58333787	58412064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58333885_58334990_58335036_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364835_58374070_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_2	chr10	+	2350	15	FSM	ENSMUSG00000038010.10	ENST00000295124.9	2360	15	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGGAAATAAACTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	58333796	58412030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58333885_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58409410_58409550_58411510
ENSMUSG00000038010.10_6	chr10	+	2212	14	FSM	ENSMUSG00000038010.10	ENST00000412964.6	2221	14	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGGAAATAAACTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	58333795	58412030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58333885_58335183_58335242_58343342_58343464_58345326_58345455_58348900_58349080_58359959_58360119_58363163_58363284_58364144_58364223_58364726_58364842_58374074_58374233_58376619_58376737_58380738_58380932_58397722_58397900_58411510
ENSMUSG00000038013.15_1	chr11	+	1525	8	FSM	ENSMUSG00000038013.15	ENST00000583130.5	1538	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTGGCGTAGTCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	98754943	98790510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98755079_98775799_98775931_98781525_98781659_98782321_98782439_98782888_98783546_98786942_98787153_98789556_98789659_98790470
ENSMUSG00000038013.15_7	chr11	+	1158	5	FSM	ENSMUSG00000038013.15	ENST00000394103.7	1169	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCCTTCCCCCATCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	98775806	98791059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98775931_98781525_98781659_98786942_98787153_98789556_98789659_98790470
ENSMUSG00000038014.8_0	chr13	-	5087	18	FSM	ENSMUSG00000038014.8	ENSMUST00000060805.7	5105	18	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATAAAGTATGGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	49121480	49032699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_49034572_49038748_49038846_49039212_49039355_49042599_49042738_49043230_49043415_49045356_49045567_49051135_49051251_49055533_49055784_49063731_49063907_49066332_49066561_49068337_49068426_49075157_49075442_49075628_49075727_49085772_49085870_49087425_49087555_49099417_49099501_49102532_49102780_49120830
ENSMUSG00000038022.12_0	chr6	+	4262	18	FSM	ENSMUSG00000038022.12	ENSMUST00000053094.8	4270	18	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATACATGTGTGCTAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	55180373	55297205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_55180555_55188234_55188355_55193491_55193728_55195206_55195454_55200982_55201354_55232595_55232652_55237519_55237627_55239703_55239821_55240760_55240850_55253538_55253641_55255031_55255096_55256069_55256136_55261730_55261799_55274672_55274737_55277927_55278090_55285139_55285321_55286246_55286320_55295247
ENSMUSG00000038023.13_0	chr5	+	5327	20	FSM	ENSMUSG00000038023.13	ENSMUST00000037865.13	5345	20	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCAGTGTCTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	124767126	124801511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124767356_124770817_124770897_124773952_124774051_124775423_124775562_124777132_124777222_124779407_124779535_124782904_124782988_124783884_124783979_124784543_124784757_124789272_124789424_124789764_124789902_124790144_124790333_124790431_124790523_124791177_124791297_124793368_124793580_124794949_124795070_124795502_124795623_124796112_124796231_124796914_124797087_124798761
ENSMUSG00000038024.18_0	chr4	+	5634	26	FSM	ENSMUSG00000038024.18	ENSMUST00000045512.15	5648	26	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGAGAGGTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	86666798	86748397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727
ENSMUSG00000038024.18_2	chr4	+	7896	33	FSM	ENSMUSG00000038024.18	ENSMUST00000082026.14	7940	33	23	21	23	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAGAAAAATCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	86666814	86768819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_86667150_86692474_86692797_86695949_86696203_86698071_86698142_86699778_86699949_86704284_86704524_86707061_86707129_86708140_86708200_86709563_86709709_86713358_86713535_86716280_86716382_86717589_86717809_86721143_86721290_86723606_86723643_86723731_86723863_86725664_86725798_86729649_86729857_86730561_86730691_86731629_86731775_86732018_86732166_86738098_86738219_86739563_86739708_86743154_86744318_86746204_86746386_86747156_86747267_86747727_86747904_86754616_86754800_86755617_86755814_86757868_86758115_86759221_86759340_86763063_86763215_86766194_86766260_86767006
ENSMUSG00000038025.9_0	chr13	-	2858	8	FSM	ENSMUSG00000038025.9	ENST00000610682.1	2868	8	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGCCATGTGTCTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	49024252	48955230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_48957164_48957810_48958199_48958706_48958817_48959300_48959397_48961080_48961180_48985557_48985595_48988685_48988772_49024143
ENSMUSG00000038028.10_0	chr6	-	3619	6	FSM	ENSMUSG00000038028.10	ENSMUST00000039913.9	3651	6	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGGATGTTTAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127086489	127062086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_127065266_127066155_127066267_127068146_127068225_127069583_127069706_127078811_127078850_127086398
ENSMUSG00000038034.16_0	chr1	+	2855	9	FSM	ENSMUSG00000038034.16	ENSMUST00000139528.8	2866	9	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	172089210	172147400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172089364_172117798_172118295_172119282_172119446_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038034.16_1	chr1	+	2174	8	FSM	ENSMUSG00000038034.16	ENSMUST00000085912.10	2182	8	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	172139337	172147400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172139366_172140057_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038034.16_2	chr1	+	2258	7	FSM	ENSMUSG00000038034.16	ENSMUST00000039506.15	2278	7	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCGAGGCCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	172139945	172147400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172140161_172143717_172144096_172144921_172145384_172145603_172146012_172146120_172146535_172146859_172146991_172147150
ENSMUSG00000038037.6_0	chr16	-	2896	2	FSM	ENSMUSG00000038037.6	ENSMUST00000229866.2	2908	2	5	7	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10603395	10600110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10602906_10603294
ENSMUSG00000038037.6_1	chr16	-	2777	2	FSM	ENSMUSG00000038037.6	ENSMUST00000038099.6	2785	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10603396	10600110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10602786_10603294
ENSMUSG00000038037.6_2	chr16	-	2678	1	ISM	ENSMUSG00000038037.6	ENSMUST00000229866.2	2908	2	612	7	612	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTCATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10602788	10600110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_10600100_10602800
ENSMUSG00000038039.14_0	chr10	+	6537	23	FSM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	2	8	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCATTTTCATGACTA	NA	NA	NA	NA	NA	NA	NA	NA	58091320	58141413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58091394_58091650_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ENSMUSG00000038039.14_11	chr10	+	6350	21	ISM	ENSMUSG00000038039.14	ENSMUST00000162860.8	6400	22	297	10	297	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAACTATATATTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	58091657	58141403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_58091705_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131921_58132062_58134485_58134688_58139915
ENSMUSG00000038039.14_7	chr10	+	6394	22	FSM	ENSMUSG00000038039.14	ENSMUST00000162860.8	6400	22	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTATATATTGCATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	58091360	58141407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_58091394_58091650_58091705_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131921_58132062_58134485_58134688_58139915
ENSMUSG00000038039.14_9	chr10	+	6460	22	ISM	ENSMUSG00000038039.14	ENSMUST00000057659.14	6547	23	334	10	292	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATTGCATTTTCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	58091652	58141411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_58091705_58092641_58092727_58094062_58094131_58103788_58103894_58105083_58107529_58108154_58108228_58110557_58110659_58110757_58110857_58112399_58112520_58114608_58114774_58116413_58116519_58117178_58117342_58121764_58121866_58121954_58122033_58122963_58123102_58124454_58124577_58126121_58126299_58128386_58128605_58130532_58130728_58131909_58132062_58134485_58134688_58139915
ENSMUSG00000038042.12_0	chr13	-	4384	10	FSM	ENSMUSG00000038042.12	ENSMUST00000035824.11	4402	10	7	11	7	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACCAACCACTACCCCGT	NA	NA	NA	NA	NA	NA	NA	NA	48779133	48731358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_48733320_48734230_48734342_48736560_48736747_48739407_48740655_48742595_48742734_48743762_48743882_48744101_48744183_48745961_48746134_48759748_48759837_48778852
ENSMUSG00000038046.5_3	chr11	+	1491	4	FSM	ENSMUSG00000038046.5	ENSMUST00000040577.5	1510	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTACCCATATGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	76134553	76141439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_76134913_76135104_76135350_76138172_76138341_76140720
ENSMUSG00000038047.19_0	chr4	-	6145	17	FSM	ENSMUSG00000038047.19	ENSMUST00000070607.9	6158	17	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTTGTCTGGAATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	86530285	86497097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86500256_86501117_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519459_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131_86526228_86529922
ENSMUSG00000038047.19_23	chr4	-	807	6	FSM	ENSMUSG00000038047.19	ENST00000421150.1	824	6	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATTAAAGACAGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	86523954	86512999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86522319_86522527_86523873
ENSMUSG00000038047.19_9	chr4	-	2610	15	FSM	ENSMUSG00000038047.19	ENST00000380502.8	2626	15	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAAGGTAAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86526219	86501127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_86502111_86503564_86503701_86503999_86504183_86504549_86504617_86507221_86507304_86511828_86511932_86512977_86513105_86513599_86513794_86517495_86517667_86518987_86519037_86519455_86519526_86521055_86521201_86522393_86522527_86523873_86523953_86526131
ENSMUSG00000038055.13_0	chr16	-	1359	2	FSM	ENSMUSG00000038055.13	ENSMUST00000038281.6	1389	2	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAATTTCCTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	10360896	10348078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10348677_10360135
ENSMUSG00000038056.16_0	chr5	-	15334	60	FSM	ENSMUSG00000038056.16	ENST00000682283.1	15342	60	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTAACTAAAGTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	25703540	25478208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25478757_25480625_25480735_25480897_25480972_25481137_25481255_25486229_25486399_25486658_25486802_25488101_25488239_25489064_25490182_25492048_25492157_25492703_25492844_25493987_25494238_25495487_25495625_25495706_25495886_25497811_25497960_25498104_25498247_25499554_25499720_25500388_25500609_25503867_25505575_25507703_25507937_25509675_25509740_25510906_25510986_25513436_25513549_25514597_25516418_25518253_25518547_25518977_25520874_25523989_25524173_25525304_25525379_25528649_25528865_25529086_25529220_25534020_25534141_25534238_25534272_25534444_25534574_25535793_25535899_25543410_25543580_25549905_25550037_25552358_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620022_25648817_25648907_25703387
ENSMUSG00000038056.16_26	chr5	-	2561	15	FSM	ENSMUSG00000038056.16	ENST00000496773.1	2577	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGATGATGGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	25600540	25552371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25552479_25554809_25554939_25556049_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564415_25564589_25564692_25568443_25568561_25571074_25571195_25577763_25578468_25590642_25590758_25592921_25593094_25600386
ENSMUSG00000038056.16_32	chr5	-	992	8	FSM	ENSMUSG00000038056.16	ENST00000625196.1	1010	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGAGGTAATGCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	25571181	25556056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25556263_25557224_25557291_25558296_25558407_25559332_25559498_25559636_25559819_25564309_25564349_25568443_25568561_25571074
ENSMUSG00000038056.16_33	chr5	-	952	7	FSM	ENSMUSG00000038056.16	ENST00000436174.5	967	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGAGGTAATGCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	25568554	25556056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25556263_25557237_25557291_25558296_25558456_25559281_25559498_25564309_25564415_25564589_25564692_25568443
ENSMUSG00000038056.16_40	chr5	-	3036	15	FSM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATCTTAAATAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	25703770	25577302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387_25703550_25703713
ENSMUSG00000038056.16_41	chr5	-	2975	14	ISM	ENSMUSG00000038056.16	ENST00000683616.1	3041	15	226	4	3	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATCTTAAATAAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	25703545	25577302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_25578468_25579487_25579566_25580339_25580454_25580873_25581026_25582110_25582281_25590642_25590758_25592921_25593094_25600386_25600550_25609276_25609387_25610368_25610518_25614131_25614330_25619882_25620025_25648817_25648907_25703387
ENSMUSG00000038058.15_0	chr6	-	4302	12	FSM	ENSMUSG00000038058.15	ENSMUST00000060655.15	4315	12	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGTTCACTGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	54949592	54900941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54901995_54905019_54905104_54907160_54907245_54910544_54910629_54911379_54911464_54914338_54914423_54915122_54915207_54916288_54916373_54920115_54921941_54924933_54925109_54926416_54926739_54949253
ENSMUSG00000038059.8_0	chr18	-	1974	2	FSM	ENSMUSG00000038059.8	ENSMUST00000042710.8	1990	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAACTGTGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	60635050	60607269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60608658_60634464
ENSMUSG00000038065.14_0	chr6	+	5295	3	FSM	ENSMUSG00000038065.14	ENSMUST00000190641.7	5303	3	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATTTGTCGTCTTTACTC	NA	NA	NA	NA	NA	NA	NA	NA	54658616	54680836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54658917_54665990_54666114_54675964
ENSMUSG00000038065.14_1	chr6	+	724	2	FSM	ENSMUSG00000038065.14	ENST00000409688.1	735	2	8	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTTGTGTACCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	54658741	54676513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54658917_54675964
ENSMUSG00000038069.7_0	chr8	-	3453	3	FSM	ENSMUSG00000038069.7	ENSMUST00000038738.7	3464	3	7	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGAAGAATGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	48166960	48162382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48165330_48165953_48166054_48166554
ENSMUSG00000038069.7_1	chr8	-	3381	3	FSM	ENSMUSG00000038069.7	ENSMUST00000212175.2	3393	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACATCTTATTAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	48166961	48162486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48165330_48165922_48166054_48166554
ENSMUSG00000038070.16_0	chr4	+	5516	26	FSM	ENSMUSG00000038070.16	ENSMUST00000047023.13	5528	26	8	4	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGATGCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84802553	85050154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981414_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ENSMUSG00000038070.16_22	chr4	+	2233	5	FSM	ENSMUSG00000038070.16	ENSMUST00000102819.10	2239	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGGTAAGTCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	84802646	84876745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236
ENSMUSG00000038070.16_3	chr4	+	5342	26	FSM	ENSMUSG00000038070.16	ENSMUST00000169371.9	5365	26	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCGGTGATGCTCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84802724	85050154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_84803062_84806879_84806969_84865794_84865880_84874512_84874648_84875236_84875417_84889367_84889502_84892099_84892263_84897560_84897759_84912865_84913019_84914691_84914818_84923159_84923282_84924641_84924762_84952024_84952126_84964539_84964632_84967840_84968374_84981417_84981593_84985716_84985811_84985893_84986118_85010873_85011066_85014986_85015085_85016585_85016713_85018494_85018633_85018950_85019137_85033501_85033688_85036678_85036757_85048878
ENSMUSG00000038072.15_0	chr5	+	2537	12	FSM	ENSMUSG00000038072.15	ENSMUST00000045737.14	2552	12	7	8	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGATGTTTGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25427886	25470908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_25428030_25452451_25452785_25453833_25453958_25455084_25455252_25457021_25457148_25459904_25460155_25462390_25462509_25463809_25463963_25466932_25467152_25468377_25468483_25469959_25470098_25470247
ENSMUSG00000038074.17_0	chr6	-	2675	4	FSM	ENSMUSG00000038074.17	ENSMUST00000046520.13	2694	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACTAGTTTTGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	54570150	54554595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54556672_54562787_54562916_54566257_54566410_54569831
ENSMUSG00000038079.15_0	chr1	-	1844	12	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	10	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCTTTATTAACTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59159243	59139752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59159110
ENSMUSG00000038079.15_5	chr1	-	1797	12	NIC	ENSMUSG00000038079.15	novel	1823	13	NA	NA	9	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	893	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTTGACAAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	59158956	59139761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133_59157166_59158861
ENSMUSG00000038079.15_6	chr1	-	1704	11	NIC	ENSMUSG00000038079.15	novel	1869	13	NA	NA	1798	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCTTTGACAAGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	59157167	59139761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_59140358_59144704_59144827_59145702_59145794_59146612_59146687_59147196_59147389_59147833_59147958_59148197_59148356_59149146_59149265_59153239_59153378_59155031_59155089_59157133
ENSMUSG00000038080.18_0	chr13	+	4966	21	FSM	ENSMUSG00000038080.18	ENSMUST00000037025.16	4987	21	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCCTTCCCAGTTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	47196989	47238749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_47197147_47201378_47201479_47202653_47202782_47204085_47204176_47205264_47205377_47207094_47207212_47212251_47212291_47214228_47214458_47216433_47216619_47217529_47217707_47218046_47218122_47220920_47221059_47221939_47222112_47225367_47225496_47227186_47227319_47227829_47227905_47230858_47230976_47231743_47231870_47232658_47232776_47233911_47234065_47236350
ENSMUSG00000038084.17_0	chr16	+	4180	29	FSM	ENSMUSG00000038084.17	ENST00000361150.6	4188	29	5	3	2	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTGGTAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	29398153	29471658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_107	chr16	+	3821	27	FSM	ENSMUSG00000038084.17	ENST00000646793.1	3837	27	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTGGTAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	29404847	29471658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29405155_29405787_29405885_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_33	chr16	+	6170	29	FSM	ENSMUSG00000038084.17	ENSMUST00000160597.8	6230	29	15	45	1	-45	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAAAAAAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	29398166	29473657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467830_29470571
ENSMUSG00000038084.17_42	chr16	+	4266	30	FSM	ENSMUSG00000038084.17	ENST00000361908.8	4279	30	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTGGTAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	29398175	29471658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_61	chr16	+	4297	31	FSM	ENSMUSG00000038084.17	ENST00000361510.8	4310	31	10	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTGGTAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	29398198	29471658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_8	chr16	+	4230	30	FSM	ENSMUSG00000038084.17	ENST00000361715.6	4242	30	9	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTCTGGTAAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	29398157	29471658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29398390_29404835_29405155_29405787_29405885_29407640_29407695_29408498_29408567_29416403_29416515_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038084.17_90	chr16	+	3891	29	FSM	ENSMUSG00000038084.17	ENST00000392437.6	3906	29	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAATTACGTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	29404842	29471561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_29405155_29405787_29405885_29407069_29407178_29407640_29407695_29408498_29408567_29421029_29421084_29424329_29424435_29426500_29426588_29427170_29427285_29429485_29429567_29429671_29429747_29430214_29430287_29430368_29430469_29430724_29430856_29432781_29432855_29432943_29433017_29433866_29433983_29434724_29434790_29435432_29435510_29436939_29437106_29439198_29439352_29439588_29439698_29440282_29440363_29444281_29444423_29447514_29447632_29448443_29448538_29448901_29449013_29467754_29467823_29470571
ENSMUSG00000038085.14_0	chr2	+	2275	13	FSM	ENSMUSG00000038085.14	ENSMUST00000037096.9	2277	13	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTTCTCTGTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	156154219	156217554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177169_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
ENSMUSG00000038085.14_2	chr2	+	1753	10	FSM	ENSMUSG00000038085.14	ENSMUST00000073942.12	1758	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATTCCACTGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	156154511	156199017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177169_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156198445
ENSMUSG00000038085.14_3	chr2	+	1905	13	FSM	ENSMUSG00000038085.14	ENSMUST00000109580.2	1910	13	1	4	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTTCTCTGTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	156154553	156217554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156154720_156161929_156161984_156170237_156170376_156175498_156175553_156177205_156177334_156180494_156180652_156181050_156181203_156183521_156183661_156195114_156195230_156207038_156207217_156209476_156209598_156215565_156215730_156217215
ENSMUSG00000038086.5_0	chr9	-	750	2	FSM	ENSMUSG00000038086.5	ENSMUST00000042790.5	773	2	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663570	50662377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50663034_50663476
ENSMUSG00000038086.5_1	chr9	-	542	2	FSM	ENSMUSG00000038086.5	ENSMUST00000217159.2	552	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTGCTGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	50663644	50662377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50662752_50663476
ENSMUSG00000038095.16_0	chr5	-	10062	32	FSM	ENSMUSG00000038095.16	ENSMUST00000065263.12	10071	32	2	7	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTGTGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124563975	124506771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563909
ENSMUSG00000038095.16_1	chr5	-	9994	31	ISM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	11085	1	11085	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTTGTGGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124552588	124506771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461
ENSMUSG00000038095.16_5	chr5	-	10139	32	FSM	ENSMUSG00000038095.16	ENSMUST00000199808.5	10161	32	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAATGCACTTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	124563662	124506781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124512735_124514160_124514355_124516532_124516610_124517347_124517486_124519571_124519665_124519745_124519841_124519921_124520069_124522529_124522605_124524892_124524993_124525381_124525454_124525539_124525653_124526587_124526724_124529984_124530117_124530636_124530813_124530901_124531070_124531863_124532059_124533957_124534110_124536474_124536573_124538066_124538250_124538770_124538925_124539024_124539131_124539203_124539340_124540124_124540287_124542022_124542114_124542251_124542386_124543631_124543793_124545153_124545251_124546539_124546641_124548132_124548446_124551247_124551353_124552461_124552591_124563509
ENSMUSG00000038102.16_0	chr8	-	4314	30	FSM	ENSMUSG00000038102.16	ENSMUST00000039061.15	4332	30	15	3	15	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATACCTTTGGTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47986487	47943152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_47943954_47946273_47946442_47948037_47948172_47949953_47950046_47951688_47951801_47954587_47954745_47954842_47954909_47956346_47956467_47956916_47957039_47958368_47958518_47958620_47958809_47960615_47960772_47963905_47964037_47965370_47965504_47965595_47965658_47966317_47966464_47966788_47966844_47966915_47966995_47967085_47967166_47967818_47967913_47969493_47969642_47972606_47972741_47975385_47975483_47977559_47977634_47978005_47978106_47979974_47980090_47980994_47981066_47982363_47982534_47983686_47983913_47986353
ENSMUSG00000038115.17_0	chr6	+	3219	24	FSM	ENSMUSG00000038115.17	ENST00000682330.1	3232	24	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCATAGAATTTTCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	125687534	126016737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125687704_125689083_125689411_125752758_125752858_125767203_125767356_125770519_125770575_125773208_125773261_125783558_125783615_125784769_125784812_125792497_125792563_125840385_125840521_125843971_125844133_125849630_125849714_125857608_125857717_125932661_125932737_125940507_125940704_125957057_125957170_125959678_125959737_125959885_125959987_125969781_125969928_125990122_125990276_125990642_125990696_125992476_125992659_126013810_126013917_126016204
ENSMUSG00000038116.17_0	chr2	+	5726	18	FSM	ENSMUSG00000038116.17	ENSMUST00000037401.10	5737	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	156038572	156151872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136196_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUSG00000038116.17_4	chr2	+	5728	18	NNC	ENSMUSG00000038116.17	novel	5737	18	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTCAGTCACATTACTG	NA	NA	NA	NA	NA	NA	NA	NA	156038574	156151872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_156038718_156065254_156065370_156093695_156093868_156096145_156096231_156106200_156106281_156109074_156109463_156114461_156114576_156115602_156115792_156118408_156118589_156129720_156130000_156134385_156134485_156135333_156135499_156136016_156136200_156138568_156138669_156140440_156140637_156144702_156145100_156146550_156146735_156149213
ENSMUSG00000038119.16_0	chr9	+	7488	20	FSM	ENSMUSG00000038119.16	ENSMUST00000119129.10	7503	20	8	7	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCAGTCGCCTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	35332861	35418941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_35333112_35363340_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ENSMUSG00000038119.16_1	chr9	+	7197	19	FSM	ENSMUSG00000038119.16	ENSMUST00000042842.6	7213	19	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCGCCTGTGAAGAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	35363386	35418946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_35363474_35363956_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ENSMUSG00000038119.16_4	chr9	+	7107	18	ISM	ENSMUSG00000038119.16	ENSMUST00000042842.6	7213	19	583	6	583	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCAGTCGCCTGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	35363954	35418941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_35364230_35365598_35365746_35366618_35366763_35367743_35368032_35368692_35368963_35375170_35375525_35381160_35381451_35382280_35382456_35384729_35384862_35388172_35388377_35389246_35389429_35389879_35389986_35394393_35394517_35398045_35398268_35400270_35400537_35403140_35403221_35414455_35414716_35415352
ENSMUSG00000038121.7_0	chr18	-	9625	4	FSM	ENSMUSG00000038121.7	ENSMUST00000042852.7	9651	4	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATGAACTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	68433394	68393273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_68402024_68405633_68405746_68408832_68409346_68433144
ENSMUSG00000038121.7_4	chr18	-	1134	4	FSM	ENSMUSG00000038121.7	ENST00000402563.5	1145	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAAAGATAGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	68433304	68401665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_68402024_68405633_68405746_68408832_68409337_68433144
ENSMUSG00000038122.10_0	chr10	-	7201	33	FSM	ENSMUSG00000038122.10	ENSMUST00000099739.5	7240	33	29	10	29	-10	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATATAAACTATCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	56104756	55890398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_55893801_55903994_55904184_55916234_55916376_55924958_55925114_55925857_55925974_55927484_55927555_55940569_55940654_55948571_55948698_55963626_55963721_55964401_55964511_55965812_55965936_55999606_55999696_56005156_56005274_56026889_56027009_56027861_56027950_56031775_56031915_56037230_56037314_56038106_56038309_56046939_56047068_56049937_56050081_56053587_56053681_56056575_56056717_56063838_56063930_56068935_56068996_56071451_56071597_56072503_56072566_56072653_56072758_56072883_56072963_56074530_56074657_56077983_56078053_56091045_56091215_56100659_56100822_56104573
ENSMUSG00000038126.18_0	chr5	-	4995	23	FSM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTTTGATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124465902	124391730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936_124463201_124465848
ENSMUSG00000038126.18_1	chr5	-	4938	22	ISM	ENSMUSG00000038126.18	ENSMUST00000184951.8	5008	23	2718	0	2718	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTTTGATTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124463197	124391730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_124393182_124397008_124397078_124398030_124398279_124398997_124399099_124399984_124400106_124400951_124401099_124403379_124403559_124405101_124405237_124421696_124421799_124423531_124423597_124424439_124424488_124428908_124429125_124430382_124430471_124435617_124435774_124436684_124437143_124442236_124442341_124445015_124445110_124450767_124450895_124453435_124453960_124454144_124454235_124458907_124459062_124462936
ENSMUSG00000038127.16_0	chr16	+	7070	11	FSM	ENSMUSG00000038127.16	ENSMUST00000100026.10	7089	11	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGTCAATGATGGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	27207627	27270958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050_27257128_27263293_27263401_27264997
ENSMUSG00000038127.16_3	chr16	+	2175	9	FSM	ENSMUSG00000038127.16	ENSMUST00000039443.14	2192	9	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAGTAAAGTAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	27207733	27258406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_27207888_27224396_27224460_27225400_27225528_27228073_27228165_27235997_27236116_27254311_27254428_27255117_27255163_27255247_27255353_27257050
ENSMUSG00000038132.7_0	chr13	+	3052	4	FSM	ENSMUSG00000038132.7	ENSMUST00000037923.5	3086	4	29	5	29	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTGCTGTTGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	46571938	46584566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_46572675_46573750_46573875_46575326_46575382_46582429
ENSMUSG00000038141.12_0	chr17	+	4486	17	FSM	ENSMUSG00000038141.12	ENSMUST00000232383.2	4499	17	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	6307141	6358583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6307350_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUSG00000038141.12_5	chr17	+	4389	17	FSM	ENSMUSG00000038141.12	ENSMUST00000088940.6	4405	17	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTATGAGACTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	6320754	6358583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6320866_6330872_6330977_6337200_6337257_6339260_6339349_6340831_6340954_6345198_6345310_6345996_6346078_6347502_6347603_6348126_6348258_6348423_6348516_6349637_6349696_6351166_6351270_6351676_6351729_6353495_6353579_6354520_6354611_6354851_6354919_6355643
ENSMUSG00000038143.17_0	chr8	-	428	2	FSM	ENSMUSG00000038143.17	ENST00000513034.3	445	2	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTCAAGCACAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	47656301	47639325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_47639608_47656155
ENSMUSG00000038145.18_0	chr9	+	4794	7	FSM	ENSMUSG00000038145.18	ENSMUST00000118886.9	4811	7	7	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATAGAAGCCGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121946372	121998758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121946474_121960958_121961009_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUSG00000038145.18_1	chr9	+	4738	6	FSM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATAGAAGCCGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121946378	121998758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121946474_121965971_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUSG00000038145.18_4	chr9	+	4645	5	ISM	ENSMUSG00000038145.18	ENSMUST00000120173.9	4758	6	19601	10	19601	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATAGAAGCCGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121965969	121998758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_121966668_121986221_121986364_121989388_121989602_121992982_121993118_121995301
ENSMUSG00000038146.9_0	chr17	-	8001	33	FSM	ENSMUSG00000038146.9	ENSMUST00000087723.5	8016	33	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCCAAGTGTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	32385820	32339802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32341835_32343255_32343354_32351175_32351324_32352361_32352667_32354358_32354522_32356789_32356875_32358104_32358328_32358618_32358774_32360190_32360524_32362217_32362784_32363141_32363261_32363340_32363599_32363675_32363809_32365380_32365566_32365954_32366103_32366235_32366438_32366738_32366965_32368948_32369105_32369576_32369691_32370259_32370412_32370489_32370683_32372498_32372610_32372726_32372961_32373287_32373402_32373711_32373826_32374931_32375118_32375225_32375382_32376864_32377099_32377184_32377308_32377392_32377732_32377813_32377957_32383136_32383219_32385649
ENSMUSG00000038147.15_0	chr1	+	463	3	FSM	ENSMUSG00000038147.15	ENST00000311224.8	483	3	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGCTGATGCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	171700291	171712243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171700516_171700871_171701022_171712154
ENSMUSG00000038147.15_1	chr1	+	463	3	FSM	ENSMUSG00000038147.15	ENST00000368048.7	478	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGCTGATGCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	171700286	171712243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171700516_171700871_171701014_171712151
ENSMUSG00000038150.8_0	chr11	-	2172	4	FSM	ENSMUSG00000038150.8	ENSMUST00000052919.8	2184	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGTCTGGCCTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98478186	98472085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98473674_98473961_98474114_98474767_98474967_98477953
ENSMUSG00000038150.8_1	chr11	-	397	3	FSM	ENSMUSG00000038150.8	ENST00000584220.5	414	3	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTACTGAGGTTGTAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	98474933	98473546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98473674_98473961_98474114_98474815
ENSMUSG00000038151.14_0	chr10	-	5059	8	FSM	ENSMUSG00000038151.14	ENST00000369096.9	5074	8	10	5	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATGCTTGTCTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44334694	44313170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_44313601_44313695_44316239_44316654_44316784_44317054_44318161_44322787_44323041_44326114_44326235_44332620_44332867_44334462
ENSMUSG00000038151.14_1	chr10	-	4452	5	FSM	ENSMUSG00000038151.14	ENST00000369089.3	4472	5	15	5	15	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAATGCTTGTCTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	44323031	44313170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_44313601_44313695_44316239_44316654_44316784_44317054_44318161_44322787
ENSMUSG00000038152.5_0	chr13	+	691	2	FSM	ENSMUSG00000038152.5	ENSMUST00000038032.5	729	2	14	24	14	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAATAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46118742	46119960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_46118860_46119386
ENSMUSG00000038155.12_0	chr19	-	784	7	FSM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGAAGAGGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4092259	4090293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902_4091939_4092164
ENSMUSG00000038155.12_1	chr19	-	689	6	ISM	ENSMUSG00000038155.12	ENSMUST00000042700.12	797	7	325	9	325	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGAAGAGGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4091938	4090293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4090540_4090707_4090816_4090981_4091086_4091397_4091486_4091583_4091691_4091902
ENSMUSG00000038160.8_0	chr10	+	2338	8	FSM	ENSMUSG00000038160.8	ENSMUST00000039286.5	2352	8	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATTATGTGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	44144365	44240285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_44144581_44162027_44162194_44165858_44165987_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44238911
ENSMUSG00000038160.8_2	chr10	+	1883	6	FSM	ENSMUSG00000038160.8	ENST00000636437.1	1905	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACCAGGAAGAGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	44162037	44370092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_44162194_44170591_44170671_44179562_44179726_44195455_44195551_44222952_44223071_44368820
ENSMUSG00000038167.7_0	chr6	-	2696	16	FSM	ENSMUSG00000038167.7	ENST00000684764.1	2710	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6500	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCATCACCTCTGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	125357460	125339707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125339831_125340004_125340683_125341546_125341699_125347343_125347460_125347544_125347678_125349020_125349141_125349440_125349579_125349775_125349926_125350069_125350181_125351491_125351642_125351936_125351988_125352205_125352302_125352686_125352852_125354344_125354501_125355664_125355874_125357312
ENSMUSG00000038168.6_0	chr16	-	3267	15	FSM	ENSMUSG00000038168.6	ENSMUST00000039990.6	3283	15	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACTTGTCTTCCGATG	NA	NA	NA	NA	NA	NA	NA	NA	25924520	25778039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_25779201_25784473_25784615_25787478_25787555_25788653_25788772_25789581_25789733_25790352_25790449_25791027_25791156_25799882_25799978_25801442_25801484_25803251_25803342_25803681_25803825_25805901_25806034_25811413_25811604_25815893_25816044_25923965
ENSMUSG00000038170.16_0	chr3	-	4541	23	FSM	ENSMUSG00000038170.16	ENST00000369349.7	4558	23	13	4	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTACTGTGTGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	97731797	97636401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97637907_97638142_97638232_97648633_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97700054_97700173_97700460_97700637_97700800_97700925_97704047_97704125_97731530
ENSMUSG00000038170.16_1	chr3	-	5371	19	FSM	ENSMUSG00000038170.16	ENST00000313431.13	5383	19	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTACTGTGTGTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	97675381	97636401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97637907_97638142_97638232_97648633_97648762_97649804_97649918_97650480_97650619_97650801_97650919_97653987_97654080_97654832_97654915_97655080_97655252_97659124_97659320_97660331_97660512_97661441_97661580_97661747_97661862_97662754_97662914_97664199_97664413_97664519_97664613_97664847_97664968_97666114_97666247_97673789
ENSMUSG00000038170.16_25	chr3	-	513	4	ISM	ENSMUSG00000038170.16	ENST00000464103.5	600	5	333	0	167	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGCCTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97731643	97700437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_97700637_97700800_97700925_97704047_97704125_97731530
ENSMUSG00000038170.16_26	chr3	-	594	5	FSM	ENSMUSG00000038170.16	ENST00000464103.5	600	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGCTGCCTTTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	97731970	97700437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97700637_97700800_97700925_97704047_97704125_97731530_97731642_97731887
ENSMUSG00000038170.16_27	chr3	-	607	5	FSM	ENSMUSG00000038170.16	ENST00000612320.1	616	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGACAGGTAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	97751028	97700470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97700637_97700800_97700925_97731530_97731642_97748949_97749102_97750974
ENSMUSG00000038170.16_28	chr3	-	549	4	ISM	ENSMUSG00000038170.16	ENST00000612320.1	616	5	1931	9	1931	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGACAGGTAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	97749097	97700470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_97700637_97700800_97700925_97731530_97731642_97748949
ENSMUSG00000038172.15_0	chr4	-	8810	20	FSM	ENSMUSG00000038172.15	ENSMUST00000102823.10	8831	20	15	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGATTACAGTCTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	83242477	83138542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83145462_83148644_83148762_83150947_83151066_83155478_83155588_83158304_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038172.15_3	chr4	-	1781	16	FSM	ENSMUSG00000038172.15	ENSMUST00000048274.11	1804	16	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTACAAAATATCACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	83242465	83158058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83158432_83159882_83159975_83160375_83160538_83162140_83162201_83162284_83162353_83163266_83163376_83164509_83164576_83165849_83165956_83171222_83171288_83174281_83174350_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038172.15_5	chr4	-	829	7	FSM	ENSMUSG00000038172.15	ENSMUST00000030205.14	842	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATGTTAATGCTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	83242421	83177442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_83177704_83179118_83179196_83180062_83180195_83181930_83182039_83189353_83189456_83216164_83216200_83242307
ENSMUSG00000038174.15_0	chr1	-	8658	12	FSM	ENSMUSG00000038174.15	ENSMUST00000161600.8	8685	12	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGATTTCCCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58625462	58561971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58569419_58574548_58574709_58578717_58578806_58579292_58579410_58583825_58583922_58585265_58585382_58587797_58587879_58591308_58591489_58596430_58596533_58597135_58597217_58605015_58605114_58625370
ENSMUSG00000038175.11_0	chr13	+	3040	7	FSM	ENSMUSG00000038175.11	ENSMUST00000038275.11	3065	7	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAAACTGGGCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	45543234	45565490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_45543520_45544664_45544856_45557875_45558062_45559368_45559567_45560032_45560198_45561831_45562253_45563896
ENSMUSG00000038178.17_0	chr11	+	6877	14	FSM	ENSMUSG00000038178.17	ENSMUST00000042561.14	6891	14	0	14	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGATGAAGAACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	75422523	75468387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75422568_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUSG00000038178.17_2	chr11	+	7128	14	FSM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGAAGAACTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75422947	75468389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75423241_75423413_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUSG00000038178.17_3	chr11	+	6825	13	ISM	ENSMUSG00000038178.17	ENSMUST00000169547.9	7145	14	490	3	490	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGAACTCCTCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	75423427	75468393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_75423615_75433983_75434192_75435507_75435564_75436579_75436657_75451724_75451818_75453597_75453732_75453816_75454020_75454387_75454535_75457804_75457944_75459186_75459317_75461396_75461471_75462582_75462707_75463140
ENSMUSG00000038180.12_0	chr2	+	1463	12	FSM	ENSMUSG00000038180.12	ENSMUST00000038860.12	1473	12	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGAATGGAGGTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	155907166	155911414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155907592_155908053_155908159_155908486_155908554_155908724_155908787_155909008_155909053_155909231_155909258_155909374_155909484_155909666_155909743_155909856_155909973_155910290_155910459_155911056_155911147_155911239
ENSMUSG00000038181.17_0	chr5	+	5359	5	FSM	ENSMUSG00000038181.17	ENSMUST00000088295.9	5371	5	12	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTATCTACTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	24791750	24799393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066_24798352_24798615
ENSMUSG00000038181.17_1	chr5	+	3708	4	FSM	ENSMUSG00000038181.17	ENSMUST00000121863.5	3715	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTTTTAGGTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	24791754	24797482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24793299_24794094_24794660_24795306_24795490_24796066
ENSMUSG00000038187.15_0	chr7	-	2566	11	FSM	ENSMUSG00000038187.15	ENSMUST00000047091.14	2581	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGAACACCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	112968538	112914839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112950987_112951146_112964111_112964177_112968078_112968166_112968405
ENSMUSG00000038187.15_4	chr7	-	2377	9	FSM	ENSMUSG00000038187.15	ENSMUST00000119278.8	2394	9	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTCTGACCAACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	112968585	112914852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_112915947_112921886_112921998_112924984_112925183_112927545_112927667_112929061_112929165_112931816_112932103_112934528_112934726_112968078_112968166_112968405
ENSMUSG00000038195.7_0	chr11	+	952	6	FSM	ENSMUSG00000038195.7	ENST00000301336.7	966	6	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGCAGGTAAGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75400978	75402719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75401199_75401269_75401364_75401457_75401565_75401647_75401931_75402126_75402261_75402605
ENSMUSG00000038205.13_0	chr3	+	4997	8	FSM	ENSMUSG00000038205.13	ENSMUST00000045743.13	5006	8	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATAATATTTGAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	97565528	97581120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_97565686_97565904_97566083_97569588_97569756_97570897_97570992_97571183_97571305_97573897_97574032_97574674_97574744_97577043
ENSMUSG00000038206.14_0	chr8	+	3558	6	FSM	ENSMUSG00000038206.14	ENSMUST00000040218.13	3571	6	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTCTTGCTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	57004134	57046971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_57004412_57017592_57017930_57022318_57022446_57041041_57041161_57043092_57043290_57044470
ENSMUSG00000038208.14_2	chr11	-	639	4	FSM	ENSMUSG00000038208.14	ENST00000579146.5	653	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTATGTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98291253	98280752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98280928_98288721_98288875_98289710_98289809_98291040
ENSMUSG00000038208.14_3	chr11	-	438	3	ISM	ENSMUSG00000038208.14	ENST00000619169.4	512	4	621	6	621	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTATGTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98281963	98280752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_98280928_98281112_98281318_98281905
ENSMUSG00000038208.14_4	chr11	-	504	4	FSM	ENSMUSG00000038208.14	ENST00000619169.4	512	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGATTATGTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98282582	98280752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98280928_98281112_98281318_98281905_98281968_98282520
ENSMUSG00000038210.11_0	chr6	-	2271	2	FSM	ENSMUSG00000038210.11	ENSMUST00000048026.10	2287	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCTACTGTGTTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	52222782	52219093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52220573_52221990
ENSMUSG00000038212.17_0	chr13	-	3812	12	FSM	ENSMUSG00000038212.17	ENSMUST00000155487.8	3832	12	11	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTTAAGACCTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	65260778	65212485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297_65223517_65226167_65226283_65229213_65229342_65234902_65234966_65243432_65243529_65260317
ENSMUSG00000038212.17_3	chr13	-	939	7	ISM	ENSMUSG00000038212.17	ENSMUST00000054730.10	3251	13	37287	1521	13	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATCTGGGAGCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	65223501	65214480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_65214676_65215676_65215820_65217457_65217556_65219818_65219932_65221369_65221442_65222799_65222914_65223297
ENSMUSG00000038213.8_0	chr6	-	1447	6	FSM	ENSMUSG00000038213.8	ENST00000266556.8	1457	6	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTACAACTCTTACTACTA	NA	NA	NA	NA	NA	NA	NA	NA	125207695	125199054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125199319_125201826_125201914_125203453_125203760_125205025_125205365_125207107_125207381_125207517
ENSMUSG00000038215.16_1	chr8	-	1672	11	FSM	ENSMUSG00000038215.16	ENSMUST00000040330.15	1690	11	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTAAGCTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	57003884	56984566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_56984768_56985511_56985550_56985810_56985936_56991645_56991719_56992730_56992938_56993900_56994069_56995940_56996064_56997152_56997300_56998439_56998588_57000422_57000560_57003579
ENSMUSG00000038217.14_0	chr11	+	1118	5	FSM	ENSMUSG00000038217.14	ENSMUST00000043598.14	1153	5	15	20	15	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACCAAAGAAGAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75358919	75361463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297_75360728_75361225
ENSMUSG00000038217.14_1	chr11	+	1106	5	FSM	ENSMUSG00000038217.14	ENSMUST00000108435.2	1112	5	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTCTCTTGTGAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	75358906	75361721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75359204_75359382_75359466_75359667_75359751_75360297_75360445_75361225
ENSMUSG00000038225.16_4	chr8	-	1694	12	FSM	ENSMUSG00000038225.16	ENST00000503752.5	1703	12	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGATAACATAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	47063681	47031909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_47032202_47034468_47034520_47034602_47034686_47039377_47039487_47039641_47039732_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038225.16_6	chr8	-	1713	12	FSM	ENSMUSG00000038225.16	ENST00000512834.5	1731	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGATAACATAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	47063705	47031909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_47032202_47034468_47034520_47034602_47034686_47039377_47039487_47039641_47039727_47043249_47043339_47045627_47045791_47046504_47046739_47052753_47052902_47058119_47058250_47060838_47060937_47063474
ENSMUSG00000038227.16_0	chr6	-	3209	2	FSM	ENSMUSG00000038227.16	ENSMUST00000048680.8	3226	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTTACGTTGTGCGGC	NA	NA	NA	NA	NA	NA	NA	NA	52204339	52200085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52201463_52202507
ENSMUSG00000038227.16_1	chr6	-	620	3	FSM	ENSMUSG00000038227.16	ENST00000673917.1	639	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGAGTGAGCCTTTTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52203074	52201232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52201463_52202507_52202598_52202774
ENSMUSG00000038227.16_3	chr6	-	628	3	FSM	ENSMUSG00000038227.16	ENSMUST00000114425.3	851	3	87	136	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACGAGTGAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52203082	52201236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52201463_52202507_52202598_52202770
ENSMUSG00000038235.5_0	chr1	+	2502	10	FSM	ENSMUSG00000038235.5	ENSMUST00000043839.5	2518	10	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGAATTTTTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	171265110	171292163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290170_171290184_171290456_171290509_171290626
ENSMUSG00000038235.5_1	chr1	+	2476	9	NIC	ENSMUSG00000038235.5	novel	2518	10	NA	NA	19	-10	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTGGAATTTTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	171265121	171292161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_171265270_171287930_171288000_171288105_171288214_171288396_171288544_171288768_171288975_171289130_171289234_171289372_171289481_171290456_171290509_171290626
ENSMUSG00000038236.9_0	chr6	-	1992	2	FSM	ENSMUSG00000038236.9	ENSMUST00000048715.9	2009	2	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGAAACACGGACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	52194470	52191479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52193011_52194009
ENSMUSG00000038240.14_0	chr10	+	2116	8	FSM	ENSMUSG00000038240.14	ENSMUST00000095725.11	2127	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGTATAAGAAAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	43097485	43316591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43098057_43174794_43174930_43221523_43221723_43248130_43248206_43269866_43270041_43271556_43271689_43289510_43289544_43315794
ENSMUSG00000038241.17_0	chr2	+	7964	33	FSM	ENSMUSG00000038241.17	ENSMUST00000039994.14	7979	33	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155798491	155840819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810677_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ENSMUSG00000038241.17_12	chr2	+	7875	32	ISM	ENSMUSG00000038241.17	ENSMUST00000039994.14	7979	33	5312	1	5276	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155803789	155840819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810677_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ENSMUSG00000038241.17_13	chr2	+	1181	7	ISM	ENSMUSG00000038241.17	ENSMUST00000109618.2	1254	8	5276	6	5276	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGAAAATTAGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155803789	155809708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477
ENSMUSG00000038241.17_4	chr2	+	7944	33	FSM	ENSMUSG00000038241.17	ENSMUST00000109619.9	7977	33	32	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTTGGCTGCTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155798509	155840819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155798578_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477_155809575_155810674_155810783_155811205_155811365_155811914_155812157_155812632_155812816_155813867_155814013_155815262_155815410_155816172_155816404_155817590_155817785_155818003_155818132_155818308_155818479_155821063_155821232_155821631_155821767_155823302_155823426_155825202_155825337_155827153_155827293_155827738_155828082_155828914_155829037_155830231_155830353_155831418_155831541_155832135_155834695_155836490_155836605_155836764_155836912_155837238_155837341_155838191_155838255_155840087
ENSMUSG00000038241.17_9	chr2	+	1235	8	FSM	ENSMUSG00000038241.17	ENSMUST00000109618.2	1254	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGAAAATTAGTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	155798526	155809708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155798583_155803791_155804075_155804819_155804877_155805632_155805716_155806029_155806196_155806908_155807016_155807232_155807485_155809477
ENSMUSG00000038244.15_0	chr7	+	6651	20	FSM	ENSMUSG00000038244.15	ENSMUST00000050149.12	6669	20	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGCTCACCGTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	111825070	111954391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_111825229_111834553_111834627_111870436_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102_111931247_111945928_111946116_111948600_111948690_111950531
ENSMUSG00000038244.15_3	chr7	+	3171	20	FSM	ENSMUSG00000038244.15	ENST00000527546.5	3187	20	11	5	-10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACATTTCTACGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	111870495	111953528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_111870777_111902794_111903003_111906210_111906328_111908632_111908735_111910522_111910679_111914178_111914280_111917592_111917851_111918918_111919035_111919813_111919941_111920552_111920644_111921722_111921871_111922684_111922885_111923181_111923289_111927858_111927928_111931102_111931283_111944452_111944561_111945928_111946116_111948600_111948690_111950531_111950635_111953105
ENSMUSG00000038250.10_0	chr8	-	4690	11	FSM	ENSMUSG00000038250.10	ENST00000307017.9	4705	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTCAGAAAGTAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	81741246	81706965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81707239_81707340_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_1	chr8	-	4418	10	FSM	ENSMUSG00000038250.10	ENST00000682469.1	4435	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATTCAGAAAGTAGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	81741076	81706965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81707239_81707340_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038250.10_11	chr8	-	4692	10	FSM	ENSMUSG00000038250.10	ENSMUST00000042724.8	4707	10	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTCACTTCCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	81741550	81707369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81708610_81711066_81712430_81714115_81714223_81716635_81716730_81719824_81720019_81722310_81722470_81727681_81727784_81731960_81732091_81738795_81738932_81740383
ENSMUSG00000038252.14_0	chr6	-	4613	32	FSM	ENSMUSG00000038252.14	ENSMUST00000043848.11	4629	32	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAAGCATCCTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	125168656	125144977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125145283_125145552_125145712_125145825_125145953_125146777_125146962_125147096_125147178_125147689_125147785_125147878_125148057_125148360_125148517_125148598_125148723_125148795_125148911_125149952_125150126_125150322_125150488_125150563_125150649_125150742_125150876_125151187_125151322_125153105_125153191_125153614_125153790_125154290_125154516_125154771_125154888_125156200_125156376_125156475_125156564_125156657_125156793_125157941_125158140_125160876_125161025_125161191_125161316_125161397_125161526_125162656_125162800_125163062_125163245_125163716_125163776_125164039_125164116_125166725_125166872_125168460
ENSMUSG00000038256.16_0	chr3	-	6107	10	FSM	ENSMUSG00000038256.16	ENST00000234739.8	6126	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAACAGAACTGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97205231	97110984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
ENSMUSG00000038256.16_10	chr3	-	6047	10	FSM	ENSMUSG00000038256.16	ENST00000683836.1	6055	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGTCAGAAAAATAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	97205236	97111013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97113258_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122427_97122745_97123628_97123942_97129094_97129178_97131157_97131294_97205072
ENSMUSG00000038256.16_4	chr3	-	5559	8	FSM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	4	11	4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATAAATATATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97129170	97111008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628_97123942_97129094
ENSMUSG00000038256.16_5	chr3	-	5484	7	ISM	ENSMUSG00000038256.16	ENST00000684121.1	5574	8	5232	11	-119	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAATAAATATATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	97123942	97111008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_97113294_97114462_97114724_97115793_97118033_97120187_97120288_97121000_97121191_97122649_97122745_97123628
ENSMUSG00000038257.11_0	chr8	+	1539	9	FSM	ENSMUSG00000038257.11	ENST00000340217.5	1558	9	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	3383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGGGGGGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	56393799	56578437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_56394010_56444160_56444289_56458151_56458220_56492616_56492841_56515465_56515549_56538148_56538287_56542018_56542234_56563481_56563626_56578108
ENSMUSG00000038259.5_0	chr2	-	1216	2	NNC	ENSMUSG00000038259.5	novel	2320	2	NA	NA	-9285	-565	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTACGAGGACATGGT	NA	NA	NA	NA	NA	NA	NA	NA	155796572	155783507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_155784650_155796498
ENSMUSG00000038260.11_0	chr7	-	4227	25	FSM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGGGTGGGCGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44983187	44952579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805_44982877_44983110
ENSMUSG00000038260.11_2	chr7	-	4149	24	ISM	ENSMUSG00000038260.11	ENSMUST00000042194.10	4234	25	318	1	4	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGAGGGTGGGCGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44982875	44952579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44953117_44954032_44954139_44954218_44954292_44954371_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44959700_44960124_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805
ENSMUSG00000038260.11_6	chr7	-	3002	20	FSM	ENSMUSG00000038260.11	ENST00000427978.6	3015	20	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGAGGCGGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	44982871	44954375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144_44977320_44982805
ENSMUSG00000038260.11_8	chr7	-	2932	19	ISM	ENSMUSG00000038260.11	ENST00000427978.6	3015	20	5564	5	5564	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTGAGGCGGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	44977315	44954375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44954505_44954712_44954919_44957667_44957846_44957967_44958143_44958521_44958655_44964018_44964097_44964404_44964518_44966198_44966345_44966429_44966560_44967459_44967595_44967762_44968105_44968665_44968779_44971211_44971312_44971422_44971615_44971744_44971807_44975986_44976171_44976400_44976565_44976695_44976877_44977144
ENSMUSG00000038264.9_0	chr9	+	3290	14	FSM	ENSMUSG00000038264.9	ENST00000261918.9	3302	14	7	5	4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACCTGTGTCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	57847401	57870143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57847616_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_2	chr9	+	3281	14	FSM	ENSMUSG00000038264.9	ENSMUST00000043059.9	3297	14	7	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTACCTGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	57847402	57870139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57847612_57860818_57860962_57861452_57861495_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_6	chr9	+	2290	13	FSM	ENSMUSG00000038264.9	ENST00000543145.6	2302	13	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTGGCCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	57847405	57869189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57847616_57860818_57860962_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038264.9_9	chr9	+	2280	13	NIC	ENSMUSG00000038264.9	novel	3297	14	NA	NA	14	-4	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCACCTGGCCTGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	57847411	57869189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_57847612_57860818_57860962_57861807_57861901_57862106_57862195_57862342_57862454_57862985_57863126_57863623_57863809_57864591_57864701_57864789_57864989_57867537_57867666_57867841_57867997_57868139_57868202_57868522
ENSMUSG00000038267.16_0	chr13	-	2656	9	FSM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCAACTCCCATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34489238	34365681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979_34483135_34489140
ENSMUSG00000038267.16_1	chr13	-	2560	8	ISM	ENSMUSG00000038267.16	ENST00000380302.8	2674	9	6111	9	6111	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTCAACTCCCATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34483135	34365680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_34367295_34376138_34376263_34377376_34377410_34379234_34379468_34381784_34381888_34387899_34388028_34405885_34406055_34482979
ENSMUSG00000038271.18_0	chr6	+	2824	9	FSM	ENSMUSG00000038271.18	ENSMUST00000119527.8	2840	9	8	8	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTTGATTGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	125122211	125138737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129576_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
ENSMUSG00000038271.18_3	chr6	+	2807	9	NNC	ENSMUSG00000038271.18	novel	2840	9	NA	NA	12	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGCACAAAAGTTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	125122225	125138731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_125122993_125126551_125126613_125126703_125126800_125128347_125128489_125129573_125129735_125130004_125130126_125130372_125130466_125136024_125136156_125137495
ENSMUSG00000038274.14_0	chr19	+	601	5	FSM	ENSMUSG00000038274.14	ENSMUST00000178310.9	613	5	9	3	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6107882	6109546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6108032_6108272_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUSG00000038274.14_16	chr19	+	694	4	FSM	ENSMUSG00000038274.14	ENSMUST00000179142.2	736	4	34	8	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6108030	6109546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUSG00000038274.14_2	chr19	+	508	5	FSM	ENSMUSG00000038274.14	ENSMUST00000043074.14	508	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTCTTATGTTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	6107972	6109546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6108032_6108275_6108356_6108457_6108603_6109173_6109230_6109378
ENSMUSG00000038279.11_0	chr6	+	2584	16	FSM	ENSMUSG00000038279.11	ENSMUST00000044200.11	2597	16	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCTAGTTGCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	125108877	125121709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125108967_125109170_125109282_125110481_125110528_125110676_125110766_125111509_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236_125118466_125120963
ENSMUSG00000038279.11_40	chr6	+	437	4	FSM	ENSMUSG00000038279.11	ENST00000540228.1	454	4	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAAGAAGCGCCCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	125109181	125111525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125109282_125110481_125110528_125110676_125110855_125111412
ENSMUSG00000038279.11_45	chr6	+	1785	14	FSM	ENSMUSG00000038279.11	ENST00000322166.10	1799	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATCTGCTCTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	125109181	125118463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125109282_125110481_125110528_125110676_125110766_125111460_125111695_125113875_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236
ENSMUSG00000038279.11_59	chr6	+	1857	14	FSM	ENSMUSG00000038279.11	ENST00000620535.4	1873	14	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTAATCTGCTCTGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	125109183	125118463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125109282_125110481_125110528_125110676_125110766_125111460_125111710_125113816_125113932_125114017_125114179_125114273_125114474_125114597_125114688_125116602_125116691_125116768_125116910_125117497_125117638_125117752_125117843_125117998_125118122_125118236
ENSMUSG00000038280.13_0	chr10	+	2982	6	FSM	ENSMUSG00000038280.13	ENSMUST00000040718.6	3006	6	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAACAAGGAAAATTGTA	NA	NA	NA	NA	NA	NA	NA	NA	42554920	42578440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_42555394_42559155_42559271_42568906_42569005_42572245_42572414_42574103_42574270_42576478
ENSMUSG00000038286.12_0	chr13	+	1235	7	FSM	ENSMUSG00000038286.12	ENSMUST00000040656.8	1253	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTGTAGTGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34221590	34258050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34221753_34228406_34228511_34230768_34230936_34234263_34234418_34244416_34244549_34247892_34248017_34257658
ENSMUSG00000038290.16_0	chr11	+	5824	19	FSM	ENSMUSG00000038290.16	ENSMUST00000045281.13	5848	19	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATATAATTGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	74816661	75055263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74816830_74819818_74821575_74822402_74822596_74823166_74823278_74825820_74825928_74826184_74826264_74836347_74836459_74836832_74837046_74872677_74872740_74880895_74881042_74929438_74929556_74932693_74932863_74944587_74944790_75030018_75030196_75033582_75033730_75046986_75047141_75050001_75050214_75050650_75050733_75053645
ENSMUSG00000038291.17_0	chr8	-	3427	19	FSM	ENSMUSG00000038291.17	ENSMUST00000110378.9	3445	19	4	14	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATCACAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	46605192	46486311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098_46577184_46604818
ENSMUSG00000038291.17_1	chr8	-	3052	18	FSM	ENSMUSG00000038291.17	ENSMUST00000170416.8	3067	18	1	14	1	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATCACAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	46577182	46486311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_46486860_46487438_46487540_46488574_46488757_46491491_46491559_46494353_46494472_46497004_46497170_46498222_46498337_46500327_46500469_46502402_46502535_46507355_46507518_46508884_46509161_46511503_46511636_46521092_46521275_46533258_46533330_46556551_46556739_46558155_46558329_46569218_46569436_46577098
ENSMUSG00000038295.15_0	chr5	-	3900	14	FSM	ENSMUSG00000038295.15	ENSMUST00000059401.7	3902	14	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTACCACAGCCGGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24597141	24589180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24590070_24590221_24590362_24590443_24590568_24590750_24590848_24591005_24591140_24591307_24591545_24591945_24592126_24592384_24592542_24592686_24593442_24594778_24594921_24595459_24595622_24596014_24596080_24596201_24596246_24596367
ENSMUSG00000038296.15_0	chr7	-	2508	11	FSM	ENSMUSG00000038296.15	ENSMUST00000106663.2	2530	11	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATTAAGAAAAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	111379171	111070876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_111071291_111084241_111084407_111107259_111107356_111112704_111112843_111119196_111119383_111147882_111147998_111153645_111153844_111155552_111155737_111198163_111198331_111215498_111215692_111378519
ENSMUSG00000038298.15_0	chr3	+	1082	5	FSM	ENSMUSG00000038298.15	ENST00000451928.6	1096	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCGAGCCCCTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	96757549	96776460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96757756_96758806_96759057_96764510_96764708_96775623_96775849_96776256
ENSMUSG00000038299.17_0	chr18	+	4441	23	FSM	ENSMUSG00000038299.17	ENSMUST00000053663.11	4455	23	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAAAGTACAAAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	32970286	33000642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905
ENSMUSG00000038299.17_34	chr18	+	2879	24	FSM	ENSMUSG00000038299.17	ENSMUST00000166214.9	2906	24	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTAAAAAGAAATCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	32970376	32999439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_32970612_32972484_32972513_32974095_32974197_32974949_32975068_32976814_32976948_32978643_32978699_32979882_32980016_32980194_32980371_32980641_32980763_32981348_32981415_32982125_32982213_32983439_32983589_32985033_32985149_32985537_32985704_32985916_32986026_32987832_32987913_32992272_32992381_32994079_32994178_32994554_32994701_32995977_32996098_32996233_32996316_32997705_32997894_32998905_32998972_32999240
ENSMUSG00000038301.16_0	chr6	+	2450	7	FSM	ENSMUSG00000038301.16	ENSMUST00000049152.15	2480	7	11	19	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCAAAGCAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	51500891	51567640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51501015_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038301.16_2	chr6	+	2153	7	FSM	ENSMUSG00000038301.16	ENST00000338523.9	2167	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTGTTAACCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	51500919	51567373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51501013_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038301.16_5	chr6	+	2446	7	FSM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	8	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCAAAGCAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	51521510	51567640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_51521630_51538997_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038301.16_6	chr6	+	2060	6	ISM	ENSMUSG00000038301.16	ENSMUST00000179365.8	2464	7	17495	277	17494	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCCTGTTAACCGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	51538997	51567373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_51539045_51552882_51552970_51556829_51556931_51557281_51557381_51565195_51565409_51565860
ENSMUSG00000038302.15_0	chr10	-	2509	13	FSM	ENSMUSG00000038302.15	ENSMUST00000041024.15	2513	13	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGCTTGTCTGATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	42354558	42188581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_42189613_42192345_42192460_42194587_42194729_42215820_42215922_42216177_42216249_42236160_42236244_42276336_42276396_42291544_42291645_42301173_42301305_42302481_42302584_42314349_42314402_42330302_42330527_42354258
ENSMUSG00000038305.16_0	chr1	+	2625	13	FSM	ENSMUSG00000038305.16	ENST00000409718.5	2643	13	12	6	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACACCTGGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57813267	57986118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_57813651_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ENSMUSG00000038305.16_1	chr1	+	2639	13	NIC	ENSMUSG00000038305.16	novel	2643	13	NA	NA	1	-5	combination_of_known_junctions	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACACCTGGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57813256	57986118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_57813651_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ENSMUSG00000038305.16_4	chr1	+	2082	12	FSM	ENSMUSG00000038305.16	ENSMUST00000164302.8	2088	12	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACACCTGGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	57813913	57986118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_57813961_57838463_57838514_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985229
ENSMUSG00000038305.16_5	chr1	+	3899	14	FSM	ENSMUSG00000038305.16	ENSMUST00000167085.8	3929	14	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTTCACGTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	57814042	57987546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_57814184_57838463_57838514_57871211_57871297_57894622_57894684_57918666_57918776_57921864_57921915_57924861_57925109_57939792_57940000_57941247_57941384_57962524_57962584_57977070_57977181_57979531_57979635_57982179_57982401_57985226
ENSMUSG00000038312.11_0	chr2	-	2277	11	FSM	ENSMUSG00000038312.11	ENSMUST00000040833.5	2290	11	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTATGGAGTGCATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	155571387	155543601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155570810_155570922_155571150
ENSMUSG00000038312.11_3	chr2	-	1742	10	FSM	ENSMUSG00000038312.11	ENST00000374491.3	1754	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGTTTTACATGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	155571309	155543947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155544513_155547574_155547697_155550851_155550997_155552763_155552889_155555257_155555400_155557929_155558142_155560183_155560310_155564351_155564458_155568554_155568595_155571150
ENSMUSG00000038319.15_0	chr5	-	3183	11	FSM	ENSMUSG00000038319.15	ENSMUST00000115098.7	3193	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAGCCATCACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	24534586	24524593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24525148_24526242_24526421_24526633_24526821_24526943_24527220_24527652_24527753_24528068_24528263_24529330_24529584_24529953_24530154_24530491_24530880_24531346_24531776_24534162
ENSMUSG00000038323.4_0	chr1	+	2990	2	FSM	ENSMUSG00000038323.4	ENSMUST00000042734.3	3008	2	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCACAGAAATGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	57416784	57424570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_57417106_57421901
ENSMUSG00000038324.14_0	chr2	-	3183	19	FSM	ENSMUSG00000038324.14	ENSMUST00000041059.12	3204	19	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGACCTGACTTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	155534290	155476197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492506_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ENSMUSG00000038324.14_5	chr2	-	3072	19	FSM	ENSMUSG00000038324.14	ENSMUST00000103140.5	3091	19	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATGGAGACTATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	155534243	155476237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155477061_155477155_155477363_155478115_155478229_155479577_155479687_155479967_155480109_155481392_155481484_155482393_155482478_155483508_155483611_155485311_155485371_155486847_155486980_155492338_155492482_155495412_155495599_155499655_155499864_155505576_155505706_155508121_155508178_155510331_155510390_155512959_155513077_155514909_155515039_155534058
ENSMUSG00000038332.14_0	chr10	+	3800	10	FSM	ENSMUSG00000038332.14	ENSMUST00000099931.11	3809	10	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGCTTTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	41685936	41784417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41687297_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUSG00000038332.14_4	chr10	+	2582	10	FSM	ENSMUSG00000038332.14	ENSMUST00000041438.7	2600	10	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTTTGCTTTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	41763449	41784417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41763592_41770037_41770104_41770815_41771017_41772018_41772202_41774178_41774422_41778524_41778673_41779687_41779801_41781169_41781361_41782331_41782477_41783267
ENSMUSG00000038335.14_0	chr11	+	3372	15	FSM	ENSMUSG00000038335.14	ENSMUST00000045807.14	3389	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTGGCTTGTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	74788914	74800162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74789042_74789202_74789307_74790007_74790228_74790334_74790470_74790978_74791404_74792314_74792475_74792834_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUSG00000038335.14_9	chr11	+	1921	14	FSM	ENSMUSG00000038335.14	ENST00000510053.2	1928	14	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGACTTATGACCCATA	NA	NA	NA	NA	NA	NA	NA	NA	74788951	74799142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_74789042_74789202_74789307_74790007_74790059_74790978_74791404_74792314_74792479_74792928_74792993_74794645_74794840_74795654_74795818_74796031_74796143_74796716_74796850_74798160_74798278_74798649_74798791_74798871_74798947_74799053
ENSMUSG00000038342.16_0	chr5	+	7273	17	FSM	ENSMUSG00000038342.16	ENSMUST00000068237.12	7303	17	27	3	27	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGTTCTGTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	123532889	123595992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123533406_123578098_123578206_123578875_123578962_123580344_123580435_123580790_123580833_123581092_123581265_123581938_123582029_123582507_123582600_123583530_123584186_123585240_123585363_123585481_123585639_123587352_123587478_123587958_123588058_123588158_123588287_123588489_123588614_123590600_123590731_123591454
ENSMUSG00000038344.15_0	chrX	-	3705	11	FSM	ENSMUSG00000038344.15	ENSMUST00000112316.9	3715	11	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATTAACAGCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	161612448	161561922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_161564415_161565224_161565321_161567317_161567411_161569612_161569688_161570554_161570675_161573607_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUSG00000038344.15_1	chrX	-	2520	6	FSM	ENSMUSG00000038344.15	ENSMUST00000112315.2	2525	6	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGTTTATGTCTCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	161612447	161571915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_161573803_161580635_161580807_161590480_161590573_161594287_161594385_161594531_161594592_161612234
ENSMUSG00000038346.19_0	chr6	+	3128	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112428.8	3132	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGATGAGAGGCAGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	124986200	125014824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125002810_125002904_125007760_125007986_125010202_125010282_125012675_125012835_125013268
ENSMUSG00000038346.19_1	chr6	+	3046	11	FSM	ENSMUSG00000038346.19	ENSMUST00000112427.8	3072	11	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAAAATAATCAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	124986260	125014712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124986463_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ENSMUSG00000038346.19_2	chr6	+	2803	11	FSM	ENSMUSG00000038346.19	ENSMUST00000084275.12	2829	11	22	4	22	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTCATATTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	124986789	125014596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124986865_124987343_124987404_125000641_125000713_125000995_125001234_125001467_125001516_125001708_125002046_125007760_125007986_125008633_125008817_125010202_125010282_125012675_125012835_125013268
ENSMUSG00000038347.16_0	chr17	-	1456	4	FSM	ENSMUSG00000038347.16	ENSMUST00000130033.8	1462	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAACTGTTTTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	13981648	13936703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13937896_13945163_13945226_13948183_13948285_13981547
ENSMUSG00000038347.16_1	chr17	-	1829	4	FSM	ENSMUSG00000038347.16	ENSMUST00000127032.8	1875	4	36	10	36	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGGAACTGTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	13981827	13936707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13937896_13942681_13942942_13948183_13948285_13981547
ENSMUSG00000038349.11_1	chr1	+	6572	6	NNC	ENSMUSG00000038349.11	novel	6580	6	NA	NA	6	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACCCAAGACATCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55445085	55793439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_55445791_55734901_55737379_55741088_55741293_55752579_55752656_55754652_55754763_55790439
ENSMUSG00000038351.15_1	chr11	-	4717	23	FSM	ENSMUSG00000038351.15	ENSMUST00000057631.12	4743	23	19	7	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	74787867	74740093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ENSMUSG00000038351.15_2	chr11	-	4841	24	FSM	ENSMUSG00000038351.15	ENSMUST00000081799.6	4873	24	30	2	30	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCTGAGGCTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	74787856	74740093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74741722_74741924_74742093_74742565_74742663_74743900_74744011_74744150_74744234_74744611_74744737_74744954_74745336_74748443_74748627_74748876_74749006_74749454_74749601_74749686_74749752_74750571_74750726_74754385_74754521_74755910_74756038_74756186_74756348_74757394_74757463_74757856_74757982_74758436_74758572_74758806_74758953_74759049_74759118_74759402_74759565_74759840_74760004_74782821_74782898_74787650
ENSMUSG00000038354.14_0	chr3	+	4040	13	FSM	ENSMUSG00000038354.14	ENSMUST00000048427.9	4052	13	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGATGGTCCTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	96577447	96598337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96577766_96585448_96585580_96586495_96586585_96586945_96587011_96587786_96587845_96587942_96588014_96588277_96588385_96589342_96589528_96590309_96590348_96590498_96592491_96596461_96596552_96596760_96596827_96597507
ENSMUSG00000038365.9_0	chr8	+	1999	10	FSM	ENSMUSG00000038365.9	ENSMUST00000043520.5	2012	10	1	12	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGAAAGTTATATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	13957803	13990510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13957864_13964943_13965085_13970947_13971049_13971884_13971935_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038365.9_6	chr8	+	1521	8	FSM	ENSMUSG00000038365.9	ENST00000276326.9	1536	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAACACGAGATGGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	13964951	13990150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13965085_13970947_13971049_13973924_13974018_13976947_13977042_13979255_13979441_13981181_13981365_13985145_13985290_13989562
ENSMUSG00000038366.16_0	chr11	+	1240	6	FSM	ENSMUSG00000038366.16	ENST00000433206.6	1259	6	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGATTGTTCTGAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	97690345	97727330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97690689_97697650_97697746_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038366.16_1	chr11	+	3527	7	FSM	ENSMUSG00000038366.16	ENSMUST00000043843.12	3540	7	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTAGGCTTCTTCCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	97690403	97729590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97690689_97697650_97697746_97706523_97706609_97715667_97715776_97724371_97724529_97724909_97725014_97726897
ENSMUSG00000038368.17_0	chr4	+	5791	44	FSM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTGACTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	88012866	88329243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_88012913_88039506_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUSG00000038368.17_11	chr4	+	5382	41	ISM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	3298	5	3298	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88042833	88329236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUSG00000038368.17_12	chr4	+	1158	6	FSM	ENSMUSG00000038368.17	ENSMUST00000107147.2	1177	6	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGACTTTTATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	88318818	88329246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_88318980_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUSG00000038368.17_5	chr4	+	5733	43	ISM	ENSMUSG00000038368.17	ENSMUST00000097992.10	5791	44	26645	7	-24	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88039511	88329236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88114995_88115254_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUSG00000038368.17_8	chr4	+	5451	42	FSM	ENSMUSG00000038368.17	ENSMUST00000159342.8	5456	42	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGTGCAATGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	88039535	88329236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_88039596_88042824_88042900_88047134_88047290_88072873_88072979_88088143_88088246_88092849_88093055_88096318_88096526_88100820_88100909_88104116_88104320_88147559_88147665_88148069_88148172_88148688_88148820_88150892_88151020_88192334_88192470_88196445_88196497_88197456_88197541_88215220_88215339_88221681_88221868_88228028_88228151_88244379_88244473_88249205_88249295_88254404_88254450_88257421_88257531_88260439_88260557_88262815_88263055_88267040_88267131_88273604_88273753_88275680_88275801_88277483_88277607_88278063_88278142_88278753_88278826_88286909_88287013_88288991_88289073_88310195_88310325_88311769_88311886_88315211_88315473_88316078_88316169_88319253_88319432_88321547_88321646_88325349_88325602_88327157_88327234_88328853
ENSMUSG00000038369.15_2	chr2	-	7157	16	FSM	ENSMUSG00000038369.15	ENST00000374796.6	7174	16	8	9	8	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGGAAAGAATGAGCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	155310624	155232570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155233141_155237639_155237792_155241574_155241612_155244591_155244661_155247394_155250371_155253444_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282603_155282706_155291202_155291272_155310419
ENSMUSG00000038369.15_81	chr2	-	3214	10	FSM	ENSMUSG00000038369.15	ENST00000616167.1	3240	10	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGTAATAAGATACTAG	NA	NA	NA	NA	NA	NA	NA	NA	155315699	155253449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155253567_155256731_155257849_155260797_155260945_155262886_155263790_155264730_155264860_155274735_155274859_155275852_155276009_155279779_155280060_155282603_155282706_155315559
ENSMUSG00000038371.16_1	chr7	-	7067	40	FSM	ENSMUSG00000038371.16	ENSMUST00000164759.8	7090	40	14	9	-3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	110214115	109907228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ENSMUSG00000038371.16_11	chr7	-	5428	39	ISM	ENSMUSG00000038371.16	ENSMUST00000166020.8	5481	40	54412	1	54412	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCCAGGATCAGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	110159556	109908605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110159464
ENSMUSG00000038371.16_12	chr7	-	5475	40	FSM	ENSMUSG00000038371.16	ENSMUST00000166020.8	5481	40	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCCCAGGATCAGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	110213963	109908605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110159464_110159554_110213913
ENSMUSG00000038371.16_2	chr7	-	7146	41	FSM	ENSMUSG00000038371.16	ENSMUST00000033058.14	7154	41	8	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAACCTCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	110214119	109907228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109908704_109909364_109909497_109911280_109911369_109911882_109912077_109913166_109913272_109914179_109914414_109916102_109916231_109919879_109920007_109928967_109929154_109929816_109929919_109934498_109934676_109939096_109939282_109940496_109940572_109948061_109948203_109950799_109950997_109961246_109961446_109963731_109963878_109964928_109965105_109966387_109966516_109968598_109968795_109970790_109970865_109971702_109971876_109974778_109975036_109977170_109977342_109998502_109998572_110019998_110020149_110021651_110021762_110027394_110027600_110038046_110038146_110040156_110040286_110040658_110040773_110041496_110041575_110046220_110046335_110049101_110049211_110051035_110051169_110060343_110060450_110062062_110062174_110063794_110063915_110088427_110088566_110159464_110159554_110213913
ENSMUSG00000038372.15_0	chr13	-	1689	11	FSM	ENSMUSG00000038372.15	ENSMUST00000041859.9	1713	11	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1079	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGCACTAACAGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	32522709	32003571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_32003962_32004124_32004194_32101602_32101700_32124466_32124586_32284339_32284468_32310982_32311088_32311889_32312083_32409117_32409228_32411197_32411286_32418335_32418381_32522364
ENSMUSG00000038374.11_0	chr3	+	2587	6	FSM	ENSMUSG00000038374.11	ENSMUST00000196456.5	2604	6	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAATTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	96537260	96541095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96537345_96537617_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_1	chr3	+	2588	6	FSM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	8	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAATTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	96537256	96541095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96537345_96537617_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_10	chr3	+	2501	5	ISM	ENSMUSG00000038374.11	ENSMUST00000048915.11	2608	6	368	12	104	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAATTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	96537616	96541095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_96537678_96537795_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038374.11_9	chr3	+	2504	5	FSM	ENSMUSG00000038374.11	ENSMUST00000200647.2	2620	5	104	12	104	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGCAATTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	96537616	96541095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96537678_96537792_96537871_96538181_96538319_96538747_96538885_96539004
ENSMUSG00000038375.16_0	chr2	+	3966	4	FSM	ENSMUSG00000038375.16	ENSMUST00000043237.14	3979	4	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACATTATGCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	155223735	155231759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155223938_155227209_155227385_155227800_155228090_155228459
ENSMUSG00000038379.16_13	chr9	+	2312	19	FSM	ENSMUSG00000038379.16	ENST00000369798.7	2334	19	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCAAAAGTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	83721253	83751321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735091_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ENSMUSG00000038379.16_15	chr9	+	2311	19	FSM	ENSMUSG00000038379.16	ENST00000509894.5	2331	19	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTGCAAAAGTGAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	83721251	83751321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735094_83735229_83736855_83736994_83739377_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235
ENSMUSG00000038379.16_2	chr9	+	2864	22	FSM	ENSMUSG00000038379.16	ENSMUST00000070326.14	2871	22	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGAACTGTACAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	83716770	83754432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_83716813_83717823_83717978_83721252_83721467_83721778_83721886_83725133_83725278_83725680_83725796_83725936_83726010_83726099_83726195_83727965_83728051_83729187_83729306_83732624_83732762_83735139_83735229_83736855_83736983_83739370_83739464_83744214_83744373_83744500_83744653_83745497_83745623_83747130_83747212_83750095_83750273_83750628_83750714_83751235_83751334_83754037
ENSMUSG00000038383.17_0	chr2	-	1622	12	FSM	ENSMUSG00000038383.17	ENSMUST00000077626.13	1636	12	13	1	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTGTTCTGATGACATG	NA	NA	NA	NA	NA	NA	NA	NA	155199337	155120163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155120570_155134609_155134753_155139002_155139128_155140965_155141110_155143120_155143276_155156421_155156520_155170500_155170602_155173068_155173179_155177280_155177344_155178601_155178662_155187567_155187633_155199185
ENSMUSG00000038387.10_0	chr7	+	982	6	FSM	ENSMUSG00000038387.10	ENSMUST00000044111.10	995	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTGGAGATGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44667391	44671065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44667593_44669523_44669612_44669726_44669830_44669913_44670023_44670510_44670630_44670703
ENSMUSG00000038388.15_0	chr6	+	2184	14	FSM	ENSMUSG00000038388.15	ENSMUST00000166318.8	2222	14	34	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATTTTGTAAGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	50087254	50175574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50153856_50153899_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ENSMUSG00000038388.15_2	chr6	+	2110	13	FSM	ENSMUSG00000038388.15	ENSMUST00000036236.15	2161	13	40	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAGAAATGCGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	50087268	50175556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_50087445_50120698_50120765_50122753_50122873_50135661_50135815_50139565_50139716_50140401_50140630_50155368_50155501_50157155_50157256_50157570_50157640_50160689_50160852_50171505_50171709_50173493_50173623_50175133
ENSMUSG00000038390.12_0	chr6	-	1565	5	FSM	ENSMUSG00000038390.12	ENST00000428545.6	1580	5	12	3	12	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGATGTTCAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	124840782	124835409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124836184_124836454_124836613_124836985_124837176_124838791_124839086_124840633
ENSMUSG00000038393.15_0	chr3	+	2810	8	FSM	ENSMUSG00000038393.15	ENSMUST00000074519.13	2827	8	16	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGATACTGGAGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	96465288	96469198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96465802_96466204_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUSG00000038393.15_1	chr3	+	2780	8	FSM	ENSMUSG00000038393.15	ENSMUST00000049093.8	2795	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACAAAAATAAATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	96465284	96469167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96465802_96466207_96466281_96466385_96466534_96466648_96466752_96466904_96467162_96467253_96467411_96467523_96467676_96467794
ENSMUSG00000038398.9_0	chr8	+	2041	9	FSM	ENSMUSG00000038398.9	ENSMUST00000043767.9	2057	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAAAGAGCATCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	13835625	13849188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13835885_13836146_13836254_13837364_13837472_13841881_13841981_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038398.9_11	chr8	+	744	6	FSM	ENSMUSG00000038398.9	ENST00000457924.2	758	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGGCAGTGTCCCCATG	NA	NA	NA	NA	NA	NA	NA	NA	13837375	13848367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13837472_13842099_13842211_13845439_13845496_13845583_13845740_13846458_13846593_13848176
ENSMUSG00000038400.16_0	chr2	-	4519	4	FSM	ENSMUSG00000038400.16	ENSMUST00000036248.13	4538	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTGAATTTTCTCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	173118315	173066258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_173070137_173070368_173070420_173076099_173076255_173117880
ENSMUSG00000038402.3_0	chr13	+	2348	2	FSM	ENSMUSG00000038402.3	ENSMUST00000042054.3	2363	2	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAAGTAGTTGTTCTAG	NA	NA	NA	NA	NA	NA	NA	NA	31809807	31815380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_31811240_31814464
ENSMUSG00000038403.11_1	chr3	+	1266	2	FSM	ENSMUSG00000038403.11	ENST00000475797.1	1285	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCGATTAGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	96432507	96436506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96432647_96435379
ENSMUSG00000038403.11_2	chr3	+	1304	3	FSM	ENSMUSG00000038403.11	ENST00000497365.5	1322	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGCGATTAGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	96432506	96436506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96432647_96434350_96434388_96435379
ENSMUSG00000038412.9_0	chr9	-	2219	4	FSM	ENSMUSG00000038412.9	ENSMUST00000060251.8	2232	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATCAGATGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121687418	121677631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121678756_121679253_121679389_121681556_121681676_121686577
ENSMUSG00000038415.11_0	chr13	+	4823	1	FSM	ENSMUSG00000038415.11	ENSMUST00000042118.11	4843	1	10	10	10	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACAAAACACTTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	31740126	31744949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_31740100_31744900
ENSMUSG00000038416.16_0	chr8	+	2280	18	FSM	ENSMUSG00000038416.16	ENSMUST00000043962.9	2301	18	10	11	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	13807685	13831927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13821297_13821451_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUSG00000038416.16_11	chr8	+	2009	17	FSM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	13807803	13831927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13807855_13808997_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUSG00000038416.16_15	chr8	+	1953	16	ISM	ENSMUSG00000038416.16	ENST00000252458.6	2014	17	1199	5	1199	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAACTAGAAGTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	13809002	13831927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_13809053_13809139_13809238_13810529_13810569_13810976_13811118_13812850_13813011_13813819_13813912_13814568_13814703_13816417_13816498_13817537_13817588_13818560_13818635_13819376_13819503_13823340_13823405_13825707_13825770_13827471_13827608_13829227_13829319_13831371
ENSMUSG00000038417.5_0	chr10	-	3266	23	FSM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTTTTGCTTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	41179240	41064167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_111	chr10	-	2493	20	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	182	39844	8	-9	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTCATGTTACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	41179074	41104011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_149	chr10	-	1779	15	ISM	ENSMUSG00000038417.5	ENSMUST00000043814.5	3282	23	181	63543	7	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCAGCAGTGGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	41179075	41127710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41143682_41143812_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_16	chr10	-	1535	13	FSM	ENSMUSG00000038417.5	ENST00000415980.2	1547	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATAGAGACGGCCTCG	NA	NA	NA	NA	NA	NA	NA	NA	41179073	41064526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41064696_41096894_41096982_41102917_41103001_41104102_41104299_41106002_41106087_41108102_41108251_41109547_41109607_41116500_41116640_41127712_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41178982
ENSMUSG00000038417.5_171	chr10	-	1651	14	NIC	ENSMUSG00000038417.5	novel	3282	23	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTACCAGCAGTGGGCGGT	NA	NA	NA	NA	NA	NA	NA	NA	41179076	41127710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_41127880_41129635_41129785_41130839_41130886_41132416_41132534_41134010_41134145_41139064_41139163_41139880_41140044_41141381_41141483_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038417.5_200	chr10	-	847	7	FSM	ENSMUSG00000038417.5	ENST00000368941.2	855	7	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCGGGAGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	41179075	41139869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41140044_41146294_41146444_41148953_41149005_41153353_41153511_41161285_41161410_41161596_41161696_41178982
ENSMUSG00000038418.8_0	chr18	+	4441	2	FSM	ENSMUSG00000038418.8	ENSMUST00000064795.6	4484	2	17	26	17	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATTAAAAGGAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	34992892	34998011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34994840_34995517
ENSMUSG00000038421.14_0	chr1	-	419	2	FSM	ENSMUSG00000038421.14	ENST00000367957.7	425	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGAGTTAATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	170755167	170748405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170748688_170755030
ENSMUSG00000038421.14_1	chr1	-	918	4	FSM	ENSMUSG00000038421.14	ENST00000367959.6	937	4	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGAGTTAATGTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	170755193	170748405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170748688_170749086_170749354_170749790_170749974_170755007
ENSMUSG00000038422.3_0	chr4	-	1188	2	FSM	ENSMUSG00000038422.3	ENSMUST00000037820.3	1205	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACTCATCCCTGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	62420503	62417251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62418331_62420394
ENSMUSG00000038425.19_0	chr18	-	2729	10	FSM	ENSMUSG00000038425.19	ENSMUST00000161542.8	2736	10	0	7	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70663209	70641757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70662821
ENSMUSG00000038425.19_1	chr18	-	2747	10	FSM	ENSMUSG00000038425.19	ENSMUST00000121674.9	2778	10	27	4	27	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTAGGCTCTCACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	70663664	70641757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70656233_70656471_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUSG00000038425.19_2	chr18	-	1938	9	FSM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGAGCTGCGCGCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	70663353	70642018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627_70659793_70661772_70661899_70663258
ENSMUSG00000038425.19_4	chr18	-	1847	8	ISM	ENSMUSG00000038425.19	ENST00000406285.7	1954	9	1463	4	1310	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGCTGCGCGCCCCTCGG	NA	NA	NA	NA	NA	NA	NA	NA	70661899	70642015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_70642816_70649864_70650068_70650447_70650576_70654920_70655013_70655772_70655952_70658446_70658600_70659627_70659793_70661772
ENSMUSG00000038429.11_0	chr6	-	3203	20	FSM	ENSMUSG00000038429.11	ENSMUST00000047510.10	3213	20	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTCAGTTCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	124806438	124791982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795437_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUSG00000038429.11_5	chr6	-	3059	20	FSM	ENSMUSG00000038429.11	ENSMUST00000122110.8	3076	20	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAATAAAAGTACGGGG	NA	NA	NA	NA	NA	NA	NA	NA	124806387	124792006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124792623_124793946_124794032_124794280_124794435_124794629_124794776_124794850_124794995_124795506_124795630_124796335_124796425_124796949_124797125_124797374_124797529_124798039_124798166_124798283_124798372_124798848_124798921_124799488_124799683_124800415_124800511_124801094_124801280_124801518_124801665_124801814_124801949_124802074_124802142_124803261_124803388_124806247
ENSMUSG00000038437.12_0	chr11	+	7174	20	FSM	ENSMUSG00000038437.12	ENSMUST00000107586.3	7206	20	12	20	12	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAAATCCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	97554409	97576269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97554507_97555780_97555861_97556311_97556367_97556555_97556666_97557615_97557720_97557900_97557995_97560249_97560463_97561078_97561178_97563282_97563509_97564285_97564898_97565263_97565446_97565599_97565709_97566964_97567032_97567195_97567339_97567687_97567886_97567973_97568063_97569139_97569490_97569790_97569882_97571295_97571653_97572371
ENSMUSG00000038446.9_0	chr10	-	3519	15	FSM	ENSMUSG00000038446.9	ENSMUST00000044166.9	3534	15	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAAAGTGCTGCTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	40759299	40707623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40709353_40710171_40710317_40712283_40712361_40717349_40717484_40717695_40717812_40719037_40719140_40720956_40721003_40723125_40723201_40723919_40724060_40725740_40725838_40726925_40727066_40728492_40728577_40733542_40733673_40743819_40743907_40758882
ENSMUSG00000038451.14_0	chr6	+	1187	3	FSM	ENSMUSG00000038451.14	ENSMUST00000047760.10	1213	3	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACAACCTGTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	124785640	124787573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124785743_124786189_124786933_124787231
ENSMUSG00000038451.14_1	chr6	+	1206	3	FSM	ENSMUSG00000038451.14	ENSMUST00000052727.5	1219	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCTGTTTCATTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	124785877	124787578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124785994_124786189_124786933_124787231
ENSMUSG00000038451.14_2	chr6	+	1307	1	FSM	ENSMUSG00000038451.14	ENSMUST00000112473.2	1322	1	5	10	5	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTCACAACCTGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	124786265	124787572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124786300_124787600
ENSMUSG00000038456.10_4	chr6	-	2537	13	FSM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATACCTGTAAATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	39504494	39457112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589_39500694_39504415
ENSMUSG00000038456.10_5	chr6	-	2458	12	ISM	ENSMUSG00000038456.10	ENST00000492720.5	2541	13	3805	0	3805	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATACCTGTAAATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	39500693	39457112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_39457284_39459946_39460088_39462492_39462571_39464753_39464824_39465700_39465811_39469932_39470121_39471587_39471639_39472110_39472205_39473907_39474109_39483634_39483757_39485175_39485304_39499589
ENSMUSG00000038459.11_0	chr7	-	2216	3	FSM	ENSMUSG00000038459.11	ENSMUST00000117085.2	2238	3	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATCAGAACGCGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	83801090	83758574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_83760010_83763458_83763639_83800489
ENSMUSG00000038462.4_0	chr13	-	1345	2	FSM	ENSMUSG00000038462.4	ENSMUST00000042834.4	1363	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAGTATGTATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30729333	30724296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_30725325_30729016
ENSMUSG00000038463.9_0	chr1	+	3076	8	FSM	ENSMUSG00000038463.9	ENSMUST00000046792.9	3095	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTTCCCGGCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	170472113	170510352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170472665_170475250_170475515_170477304_170477413_170489927_170490105_170494140_170494367_170496319_170496833_170508605_170508783_170509292
ENSMUSG00000038467.16_0	chr2	+	1599	5	FSM	ENSMUSG00000038467.16	ENSMUST00000044277.10	1616	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCATATCGCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	154498944	154536695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154499292_154531437_154531616_154533129_154533245_154534468_154534596_154535863
ENSMUSG00000038481.14_0	chr10	+	5779	13	FSM	ENSMUSG00000038481.14	ENSMUST00000044672.11	5807	13	22	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTTTCTGCGTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	40225325	40359808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_40225718_40270320_40270397_40310299_40310411_40312067_40312209_40330010_40330069_40342633_40342766_40345574_40345719_40345881_40345952_40351564_40351638_40352152_40352251_40352884_40352964_40353697_40353965_40355670
ENSMUSG00000038482.12_0	chr8	+	2500	12	FSM	ENSMUSG00000038482.12	ENSMUST00000209885.2	2511	12	0	11	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAACAAGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13388750	13428437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13388807_13389664_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_15	chr8	+	2416	11	FSM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAACAAGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13388767	13428437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13388807_13389664_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_22	chr8	+	2438	11	FSM	ENSMUSG00000038482.12	ENSMUST00000170909.2	1700	11	-3	-735	-3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAACAAGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13389670	13428437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13389740_13407042_13407110_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038482.12_23	chr8	+	2374	10	ISM	ENSMUSG00000038482.12	ENSMUST00000209396.2	2421	11	900	5	-6	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAACAAGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13389667	13428437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_13389740_13415088_13415196_13419458_13419581_13420480_13420647_13420878_13421023_13421351_13421421_13422465_13422618_13422935_13423103_13423844_13423924_13427141
ENSMUSG00000038485.7_0	chr11	+	6992	10	FSM	ENSMUSG00000038485.7	ENSMUST00000045540.4	7015	10	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATCTGTTACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	97253391	97289360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97254250_97263891_97263957_97267262_97267368_97267822_97267925_97268761_97268893_97269368_97269538_97273725_97273855_97279937_97280074_97280391_97280543_97284214
ENSMUSG00000038489.9_0	chr7	-	1633	2	FSM	ENSMUSG00000038489.9	ENSMUST00000043870.9	1650	2	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	141055039	141051783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141053318_141054940
ENSMUSG00000038489.9_1	chr7	-	1535	1	NIC	ENSMUSG00000038489.9	novel	1650	2	NA	NA	1727	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATCTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	141053318	141051783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_141051800_141053300
ENSMUSG00000038495.15_0	chr3	+	8032	12	FSM	ENSMUSG00000038495.15	ENSMUST00000035519.12	8043	12	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACACCTATTTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	96011838	96068435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96012132_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ENSMUSG00000038495.15_1	chr3	+	8093	13	FSM	ENSMUSG00000038495.15	ENSMUST00000090785.9	8101	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTATTTTGTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96011838	96068438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96012132_96016022_96016081_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ENSMUSG00000038495.15_2	chr3	+	8001	14	FSM	ENSMUSG00000038495.15	ENSMUST00000098849.3	8046	14	37	8	37	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCTATTTTGTATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96014435	96068438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96014524_96016022_96016081_96037541_96037655_96043784_96043936_96047727_96047917_96048798_96049027_96051551_96051654_96052278_96052407_96058178_96058292_96058654_96058783_96059211_96059362_96059829_96059945_96060724_96060810_96062085
ENSMUSG00000038497.8_0	chr8	+	4314	13	FSM	ENSMUSG00000038497.8	ENSMUST00000045229.7	4335	13	13	8	13	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGATGTTGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	13338223	13372916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13338388_13341656_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358345_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038497.8_10	chr8	+	2666	12	FSM	ENSMUSG00000038497.8	ENST00000434316.7	2676	12	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGATTTACTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	13341729	13371508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13342172_13342709_13342890_13344845_13345038_13345979_13346109_13348212_13348306_13353727_13353915_13358348_13358467_13360144_13360341_13363805_13363957_13368842_13368923_13369762_13369913_13370760
ENSMUSG00000038500.16_0	chr17	-	1859	4	FSM	ENSMUSG00000038500.16	ENSMUST00000172429.8	1878	4	12	7	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTATCTTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36289851	36283439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36289602
ENSMUSG00000038500.16_1	chr17	-	2707	4	FSM	ENSMUSG00000038500.16	ENSMUST00000055454.14	2727	4	13	7	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTATCTTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36291115	36283439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36284696_36285414_36285706_36289272_36289336_36290018
ENSMUSG00000038500.16_3	chr17	-	1703	3	FSM	ENSMUSG00000038500.16	ENST00000376557.3	1718	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGGTATCTTCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36290174	36283439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36284696_36285414_36285706_36290018
ENSMUSG00000038502.18_0	chr7	-	1867	12	FSM	ENSMUSG00000038502.18	ENSMUST00000046575.17	1883	12	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCACTTGCTGTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44519202	44512497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_13	chr7	-	1473	12	FSM	ENSMUSG00000038502.18	ENST00000391842.5	1482	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCACTTGCTGTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44519074	44512497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44512603_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038502.18_2	chr7	-	1529	13	FSM	ENSMUSG00000038502.18	ENST00000599732.5	1539	13	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCACTTGCTGTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44519046	44512497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44512614_44512795_44512869_44512958_44513157_44513806_44513912_44514035_44514094_44514185_44514260_44514336_44514427_44514895_44515052_44516233_44516342_44516483_44516542_44516616_44516700_44516798_44516937_44518774
ENSMUSG00000038503.16_0	chr7	+	4456	3	FSM	ENSMUSG00000038503.16	ENSMUST00000094215.10	4492	3	10	26	10	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	2197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	83541217	83550714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_83541684_83544737_83544971_83546957
ENSMUSG00000038503.16_5	chr7	+	1190	4	FSM	ENSMUSG00000038503.16	ENST00000561312.5	1201	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGAGGAACCAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	83544741	83584960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_83544971_83546957_83547550_83581534_83581798_83584854
ENSMUSG00000038506.14_0	chr8	-	2832	5	FSM	ENSMUSG00000038506.14	ENSMUST00000110840.8	2853	5	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13338104	13305962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13307977_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUSG00000038506.14_2	chr8	-	2931	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110839.10	2937	6	6	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGATGTCCTTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13338120	13305962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13307977_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUSG00000038506.14_4	chr8	-	2748	7	FSM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	13337841	13305963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUSG00000038506.14_5	chr8	-	2706	6	ISM	ENSMUSG00000038506.14	ENSMUST00000045366.10	2748	7	6720	0	6712	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	13331121	13305963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_13307977_13308946_13309044_13311384_13311468_13321589_13321721_13328516_13328686_13330908
ENSMUSG00000038506.14_6	chr8	-	2930	6	FSM	ENSMUSG00000038506.14	ENSMUST00000110838.8	2955	6	25	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCCTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	13338106	13305963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13307977_13308946_13309044_13321589_13321721_13328516_13328686_13330908_13331126_13337803
ENSMUSG00000038507.7_0	chr6	-	3212	12	FSM	ENSMUSG00000038507.7	ENSMUST00000038398.7	3231	12	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGATGAAGACTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	39095271	39063350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39064575_39065911_39066064_39067132_39067264_39068238_39068315_39070561_39070659_39073469_39073612_39077182_39077379_39079492_39079617_39082823_39082926_39088444_39088746_39091099_39091236_39094740
ENSMUSG00000038508.8_0	chr8	-	1534	2	FSM	ENSMUSG00000038508.8	ENSMUST00000003808.8	1545	2	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	71084735	71082043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71082825_71083982
ENSMUSG00000038508.8_1	chr8	-	1380	3	FSM	ENSMUSG00000038508.8	ENSMUST00000110103.2	1380	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGCGTCTCAGTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	71085106	71082043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71082825_71083982_71084275_71084799
ENSMUSG00000038510.13_0	chr10	-	1841	10	FSM	ENSMUSG00000038510.13	ENSMUST00000045114.13	1853	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTAAAACAAGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40122991	40099246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122538
ENSMUSG00000038510.13_1	chr10	-	1293	10	FSM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40123029	40099422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580_40120714_40122948
ENSMUSG00000038510.13_2	chr10	-	1212	9	ISM	ENSMUSG00000038510.13	ENSMUST00000183309.8	1296	10	2319	0	2285	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATGTCACAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40120713	40099422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_40099917_40101292_40101438_40103554_40103658_40109103_40109204_40110817_40110895_40112118_40112201_40115743_40115784_40119851_40119890_40120580
ENSMUSG00000038515.11_0	chr8	-	3005	8	FSM	ENSMUSG00000038515.11	ENSMUST00000210317.2	3013	8	3	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTACAAAAAAGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	13250617	13225166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13242049_13242209_13250048_13250201_13250480
ENSMUSG00000038515.11_1	chr8	-	1016	7	FSM	ENSMUSG00000038515.11	ENSMUST00000209691.2	1030	7	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATTAGTGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	13250553	13226932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13250048_13250201_13250480
ENSMUSG00000038515.11_2	chr8	-	940	6	ISM	ENSMUSG00000038515.11	ENSMUST00000209691.2	1030	7	359	11	338	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAAATTAGTGTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	13250197	13226932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_13227143_13229322_13229509_13229582_13229756_13236882_13236980_13239622_13239748_13250048
ENSMUSG00000038518.16_0	chr13	+	5982	18	FSM	ENSMUSG00000038518.16	ENSMUST00000173246.8	5997	18	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTTGTCTGTCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44884755	45075113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_44885393_44976855_44976992_45001755_45001898_45027758_45027929_45038179_45038357_45049729_45049966_45055701_45056735_45059708_45060212_45060969_45061063_45063818_45063938_45064012_45064084_45064641_45064757_45066656_45066763_45067126_45067310_45067721_45067853_45068239_45068424_45069892_45070001_45073275
ENSMUSG00000038520.16_0	chr7	-	8729	17	FSM	ENSMUSG00000038520.16	ENSMUST00000047085.16	8750	17	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCCCAAATCCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	44498487	44484055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44490845_44490966_44491054_44491406_44491524_44491626_44491725_44492044_44492145_44492239_44492341_44492418_44492536_44492855_44492951_44493507_44493612_44493694_44493824_44494435_44494598_44494680_44494793_44495298_44495507_44496184_44496309_44497693_44497766_44497859_44497959_44498272
ENSMUSG00000038521.18_0	chr6	-	2920	12	FSM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	18	8	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACATTGCTGGTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	124519262	124507311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519151
ENSMUSG00000038521.18_1	chr6	-	2881	12	FSM	ENSMUSG00000038521.18	ENSMUST00000162443.8	2906	12	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATTGAACATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	124519307	124507320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291_124518448_124519226
ENSMUSG00000038521.18_2	chr6	-	2801	11	ISM	ENSMUSG00000038521.18	ENSMUST00000160505.8	2946	12	830	19	830	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGAAATTGAACATTG	NA	NA	NA	NA	NA	NA	NA	NA	124518450	124507322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_124508700_124509499_124509575_124510232_124510362_124510854_124510934_124511316_124511433_124512191_124512346_124513290_124513491_124514319_124514446_124517279_124517458_124517747_124517956_124518291
ENSMUSG00000038523.11_0	chr2	+	686	3	FSM	ENSMUSG00000038523.11	ENSMUST00000045116.11	704	3	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGCAAACCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154390815	154391913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154390988_154391255_154391316_154391459
ENSMUSG00000038523.11_1	chr2	+	694	3	FSM	ENSMUSG00000038523.11	ENSMUST00000109709.4	704	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGCAAACCCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154390846	154391913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154390988_154391216_154391316_154391459
ENSMUSG00000038524.14_0	chr18	-	4111	20	FSM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGACCACAGAAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38102818	38090642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100955_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ENSMUSG00000038524.14_1	chr18	-	4043	19	ISM	ENSMUSG00000038524.14	ENST00000435817.7	4121	20	324	7	290	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGGACCACAGAAGGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	38102497	38090642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_38092708_38092830_38092887_38094299_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097223_38097366_38097472_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100955_38101266_38101335_38101802_38101849_38102407
ENSMUSG00000038524.14_21	chr18	-	2437	19	FSM	ENSMUSG00000038524.14	ENST00000522783.5	2441	19	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGGCAGGGGGCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	38102787	38092145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38092708_38092830_38092965_38094295_38094388_38095625_38095847_38095972_38096091_38096180_38096265_38096345_38096475_38097060_38097112_38097843_38097964_38098703_38098800_38098951_38099075_38099493_38099623_38100415_38100480_38100590_38100728_38100812_38100949_38101266_38101335_38101802_38101849_38102407_38102506_38102758
ENSMUSG00000038525.17_0	chr5	+	2206	6	FSM	ENSMUSG00000038525.17	ENSMUST00000072896.13	2221	6	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTTTCCAATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	21850887	21867688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21851234_21853617_21853767_21856742_21856878_21858373_21858551_21865550_21865623_21866361
ENSMUSG00000038526.15_0	chr3	-	1226	8	NIC	ENSMUSG00000038526.15	novel	1264	8	NA	NA	19	-6	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGCTCAAAAAATTAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	95811984	95806129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr3_-_95806220_95806535_95806657_95806742_95806901_95807051_95807119_95807242_95807339_95807554_95807698_95808404_95808585_95811613
ENSMUSG00000038527.10_0	chr6	+	2995	6	FSM	ENSMUSG00000038527.10	ENSMUST00000049124.10	3010	6	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATATAAATATGGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	124470083	124487599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124470190_124470773_124471003_124482189_124482380_124483850_124483953_124484048_124484124_124485306
ENSMUSG00000038527.10_3	chr6	+	561	2	FSM	ENSMUSG00000038527.10	ENST00000266542.9	587	2	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTTGAAATAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	124485324	124544987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124485742_124544843
ENSMUSG00000038528.16_0	chr10	-	2363	4	FSM	ENSMUSG00000038528.16	ENSMUST00000164566.8	2372	4	0	9	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGACATCGGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	39862642	39844157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_39845970_39849587_39849705_39851093_39851263_39862377
ENSMUSG00000038530.12_0	chr1	-	2924	5	FSM	ENSMUSG00000038530.12	ENSMUST00000027991.12	2941	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACAATCTGCTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	169575203	169569054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169571490_169571919_169572087_169572243_169572306_169572785_169572891_169575048
ENSMUSG00000038530.12_1	chr1	-	520	5	FSM	ENSMUSG00000038530.12	ENST00000531057.5	531	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCCATGTAAAACTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	169575205	169571114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_169571192_169571967_169572087_169572243_169572306_169572785_169572891_169575048
ENSMUSG00000038533.16_0	chr2	+	6068	11	FSM	ENSMUSG00000038533.16	ENSMUST00000109725.8	6080	11	6	6	3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGCTGGACCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	154278406	154381270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373144_154373333_154376803
ENSMUSG00000038533.16_1	chr2	+	6055	11	FSM	ENSMUSG00000038533.16	ENSMUST00000045270.15	6069	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGCTGGACCAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	154278422	154381270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154278557_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ENSMUSG00000038533.16_15	chr2	+	2905	11	FSM	ENSMUSG00000038533.16	ENST00000397800.5	2915	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGGGACTGCATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	154301993	154377971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154302277_154342319_154342464_154346472_154346715_154352427_154352518_154357736_154357919_154359628_154359883_154363070_154363157_154365823_154366020_154370756_154370826_154373141_154373333_154376803
ENSMUSG00000038534.20_0	chr11	+	3760	23	FSM	ENSMUSG00000038534.20	ENSMUST00000090020.13	3771	23	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGCCTGTGACCACTC	NA	NA	NA	NA	NA	NA	NA	NA	96941458	96959724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96941780_96943050_96943203_96943311_96943438_96943595_96943650_96944940_96945055_96945375_96945472_96945584_96945703_96946352_96946457_96946680_96946774_96946856_96946990_96947078_96947174_96947353_96947450_96949285_96949424_96949924_96950019_96950868_96951117_96951276_96951415_96956414_96956479_96956606_96956686_96957758_96957904_96958030_96958176_96958259_96958387_96958490_96958614_96958767
ENSMUSG00000038535.18_23	chr9	+	4197	20	ISM	ENSMUSG00000038535.18	ENST00000267807.12	4272	21	20958	12	-2767	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACCTGTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72203217	72271025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038535.18_33	chr9	+	2701	16	FSM	ENSMUSG00000038535.18	ENST00000559000.6	2716	16	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTGGTTTTCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72205992	72247459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246897
ENSMUSG00000038535.18_6	chr9	+	4260	21	FSM	ENSMUSG00000038535.18	ENST00000267807.12	4272	21	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAACCTGTCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72182259	72271025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72182318_72203212_72203318_72205983_72206131_72208982_72209049_72209148_72209289_72215232_72215351_72219359_72219531_72219932_72220043_72226373_72226598_72229734_72229893_72230281_72230383_72231289_72231437_72236309_72236445_72238147_72238456_72238574_72238716_72242328_72242392_72246027_72246147_72246293_72246331_72258806_72258853_72267567_72267624_72269215
ENSMUSG00000038538.18_0	chr6	+	14629	17	FSM	ENSMUSG00000038538.18	ENSMUST00000160583.8	14644	17	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTACTCTGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	38410891	38489690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38411534_38417389_38417483_38429804_38429907_38438409_38438548_38439897_38440002_38440488_38440979_38447086_38447158_38455998_38456129_38458738_38458858_38459437_38459552_38460053_38460198_38461009_38461061_38464042_38464086_38467318_38468867_38475622_38475855_38476121_38476212_38479172
ENSMUSG00000038539.16_0	chr7	-	1782	3	FSM	ENSMUSG00000038539.16	ENSMUST00000047356.11	1816	3	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTTATCTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	44466048	44461679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44462945_44464412_44464707_44465825
ENSMUSG00000038539.16_1	chr7	-	1711	3	FSM	ENSMUSG00000038539.16	ENSMUST00000107893.9	1735	3	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTCTTATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	44465058	44461680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44462945_44464412_44464707_44464905
ENSMUSG00000038540.15_0	chr7	+	6209	23	FSM	ENSMUSG00000038540.15	ENSMUST00000039317.14	6221	23	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAGCACTATAGAG	NA	NA	NA	NA	NA	NA	NA	NA	83234141	83274813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_83234389_83235493_83235641_83239847_83239924_83245268_83245351_83246654_83246762_83247407_83247507_83247607_83247751_83249155_83249304_83250093_83250138_83252535_83252684_83253938_83254049_83256941_83257021_83258283_83258533_83259051_83259181_83259919_83259988_83261641_83261771_83264120_83264232_83265065_83265192_83265940_83266020_83267336_83267380_83267743_83267831_83269106_83269363_83271311
ENSMUSG00000038542.15_0	chr8	-	2843	14	NNC	ENSMUSG00000038542.15	novel	2860	14	NA	NA	12	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGCATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	13155447	13127194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_13128290_13128547_13128672_13129637_13129764_13129894_13129969_13131263_13131365_13135322_13135465_13136250_13136327_13140656_13140761_13144142_13144198_13145830_13145876_13147604_13147669_13148562_13148637_13150324_13150415_13154774
ENSMUSG00000038543.14_0	chr3	-	775	6	FSM	ENSMUSG00000038543.14	ENSMUST00000090476.10	809	6	12	22	12	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAATTAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	95799305	95791287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95791550_95792281_95792384_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUSG00000038543.14_1	chr3	-	734	6	FSM	ENSMUSG00000038543.14	ENSMUST00000036360.13	752	6	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAATTAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	95799267	95791287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95791550_95792281_95792381_95795452_95795609_95796168_95796228_95797034_95797122_95799196
ENSMUSG00000038544.15_0	chr4	-	3195	5	FSM	ENSMUSG00000038544.15	ENSMUST00000095063.11	3237	5	14	28	14	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAACAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	59783852	59769664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59782253_59782335_59783727
ENSMUSG00000038544.15_1	chr4	-	1434	4	FSM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAGTTACTTTGTAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	59783808	59771300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_59772460_59773915_59774007_59775446_59775550_59783727
ENSMUSG00000038544.15_2	chr4	-	1348	3	ISM	ENSMUSG00000038544.15	ENSMUST00000107526.8	1438	4	8261	7	8261	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGGAGTTACTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	59775547	59771303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_59772460_59773915_59774007_59775446
ENSMUSG00000038545.14_0	chr17	+	5513	26	FSM	ENSMUSG00000038545.14	ENSMUST00000043464.14	5530	26	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTATGACCTGTATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	46961273	46975284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46961642_46962362_46962945_46963385_46963538_46963650_46964125_46964675_46964815_46964911_46965109_46965359_46965586_46966440_46966679_46966769_46966876_46967919_46968148_46968369_46968461_46968557_46968730_46968853_46968960_46969247_46969344_46969533_46969710_46969987_46970122_46970392_46970576_46970788_46970896_46970984_46971168_46972219_46972381_46972561_46972779_46972850_46973158_46973983_46974130_46974247_46974375_46974463_46974670_46974893
ENSMUSG00000038546.10_0	chr13	-	3354	13	FSM	ENSMUSG00000038546.10	ENST00000011619.6	3364	13	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATATTAGTGTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	43634750	43556155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578710_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038546.10_1	chr13	-	3359	14	FSM	ENSMUSG00000038546.10	ENSMUST00000144326.4	3371	14	7	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATATTAGTGTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	43634751	43556155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43557166_43560087_43560200_43565886_43566039_43567458_43567581_43569800_43569946_43573051_43573243_43574686_43574796_43576026_43576140_43578505_43578691_43583923_43583947_43588289_43588458_43589565_43589619_43615187_43615300_43633887
ENSMUSG00000038550.11_0	chr3	-	1869	5	FSM	ENSMUSG00000038550.11	ENSMUST00000159739.8	1939	5	66	4	66	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAATGCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95789451	95785818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492
ENSMUSG00000038550.11_1	chr3	-	1395	6	FSM	ENSMUSG00000038550.11	ENSMUST00000036418.10	1398	6	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAAATGCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	95789542	95785818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95786462_95787720_95787833_95787946_95788026_95788294_95788371_95788492_95788902_95789466
ENSMUSG00000038552.15_0	chr5	-	2306	7	FSM	ENSMUSG00000038552.15	ENSMUST00000172435.8	2333	7	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAAAAAAGTATAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	31453269	31449601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ENSMUSG00000038552.15_1	chr5	-	1350	8	FSM	ENSMUSG00000038552.15	ENSMUST00000041266.11	1375	8	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAACTGGAACTGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	31453198	31450237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31450509_31450757_31450831_31451029_31451158_31451447_31451538_31451973_31452179_31452349_31452466_31452556_31452702_31452876
ENSMUSG00000038555.8_0	chr18	+	1906	8	FSM	ENSMUSG00000038555.8	ENSMUST00000043484.8	1926	8	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGATCTCTGCGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34973661	34980516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34973841_34975506_34975580_34975909_34975987_34978304_34978426_34978627_34978742_34978997_34979146_34979241_34979373_34979453
ENSMUSG00000038560.8_0	chr11	+	3530	2	FSM	ENSMUSG00000038560.8	ENSMUST00000047997.8	3546	2	7	9	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACCAACCACACTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	96904226	96915551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96904437_96912231
ENSMUSG00000038560.8_1	chr11	+	3607	2	FSM	ENSMUSG00000038560.8	ENSMUST00000107622.2	3621	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAACCAACCACACTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	96909566	96915551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96909854_96912231
ENSMUSG00000038563.15_3	chr7	+	3603	20	FSM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCAAACCGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	82297848	82427053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_82297887_82298733_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUSG00000038563.15_4	chr7	+	3559	19	ISM	ENSMUSG00000038563.15	ENSMUST00000039881.4	3610	20	889	9	397	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTCCAAACCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	82298737	82427051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_82298840_82301088_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82330559_82330684_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037_82342205_82347086_82347226_82399999_82400132_82402781_82402930_82411642_82412623_82421664_82421850_82426698
ENSMUSG00000038563.15_6	chr7	+	1389	11	FSM	ENSMUSG00000038563.15	ENST00000560401.5	1392	11	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGGGTAAGAGTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	82301088	82342197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_82301157_82307264_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037
ENSMUSG00000038563.15_7	chr7	+	1317	10	ISM	ENSMUSG00000038563.15	ENST00000560401.5	1392	11	6181	2	6181	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGGGTAAGAGTTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	82307268	82342197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_82307350_82320812_82320947_82322017_82322156_82323575_82323791_82332212_82332290_82332911_82333049_82333526_82333650_82335872_82335973_82341670_82341823_82342037
ENSMUSG00000038564.12_0	chr5	-	5385	48	FSM	ENSMUSG00000038564.12	ENSMUST00000041565.11	5403	48	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGACTGCTGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	31448441	31410628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433364_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ENSMUSG00000038564.12_13	chr5	-	1730	15	FSM	ENSMUSG00000038564.12	ENST00000416524.2	1743	15	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGACTGTGGTGGGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	31448421	31434148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444459_31448317
ENSMUSG00000038564.12_2	chr5	-	5234	48	FSM	ENSMUSG00000038564.12	ENST00000675690.1	5252	48	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGACTGGCGCAGCCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	31448411	31410683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31410769_31410896_31410989_31411158_31411313_31411562_31411662_31411745_31411806_31411996_31412093_31412594_31412715_31412908_31413020_31413898_31414016_31414232_31414320_31414674_31414739_31414860_31414971_31415157_31415257_31417737_31417868_31417966_31418077_31418270_31418452_31418782_31418848_31419174_31419269_31420263_31420407_31420709_31420827_31420914_31421051_31421121_31421220_31421750_31421841_31422661_31422807_31422986_31423108_31423258_31423338_31423518_31423768_31423978_31424057_31424577_31424671_31424938_31425024_31428983_31429092_31429330_31429468_31433195_31433298_31434212_31434326_31437762_31437849_31438009_31438114_31438305_31438360_31438687_31438850_31439899_31439996_31440376_31440501_31441347_31441563_31442595_31442684_31442802_31442883_31443106_31443173_31443421_31443462_31443920_31444034_31444237_31444382_31448317
ENSMUSG00000038569.14_0	chr5	-	2356	13	FSM	ENSMUSG00000038569.14	ENSMUST00000117263.8	2371	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACAAATATGAGTGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	122492287	122461292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122462288_122463413_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490608_122490678_122492201
ENSMUSG00000038569.14_2	chr5	-	2271	12	ISM	ENSMUSG00000038569.14	ENSMUST00000117263.8	2371	13	1616	8	1616	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAAATATGAGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	122490679	122461293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_122462288_122463413_122463528_122463943_122464043_122469531_122469761_122471358_122471479_122472324_122472390_122472472_122472580_122477794_122477902_122482260_122482361_122489321_122489437_122489623_122489774_122490608
ENSMUSG00000038570.16_0	chr7	-	371	2	FSM	ENSMUSG00000038570.16	ENST00000565432.1	391	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGTAACCTGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	82295031	82292860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_82293058_82294857
ENSMUSG00000038578.16_0	chr4	-	3281	17	FSM	ENSMUSG00000038578.16	ENSMUST00000040166.14	3295	17	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTATTTGGGTTTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59438619	59314682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_59315410_59315711_59315806_59324867_59324908_59329462_59329722_59332936_59333034_59349825_59350013_59351637_59351730_59365721_59365915_59369530_59369641_59379598_59379786_59380860_59380959_59390572_59390753_59411269_59411450_59412169_59412323_59423994_59424151_59427950_59428065_59438205
ENSMUSG00000038582.16_0	chr5	+	4616	6	FSM	ENSMUSG00000038582.16	ENSMUST00000053426.15	4644	6	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATACTATTTGCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	122422446	122462335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122422973_122446193_122446374_122451657_122451857_122455173_122455298_122457776_122457907_122458878
ENSMUSG00000038587.11_0	chr10	+	6188	4	FSM	ENSMUSG00000038587.11	ENSMUST00000045730.7	6195	4	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTGTTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	4216384	4309468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4216669_4263742_4263858_4303141_4307940_4308477
ENSMUSG00000038587.11_1	chr10	+	5931	3	FSM	ENSMUSG00000038587.11	ENSMUST00000239373.2	5956	3	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATATTCACTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4284563	4309464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4284710_4303141_4307940_4308477
ENSMUSG00000038587.11_2	chr10	+	5936	3	FSM	ENSMUSG00000038587.11	ENSMUST00000216139.3	5950	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATATTCACTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4296815	4309464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4296967_4303141_4307940_4308477
ENSMUSG00000038587.11_3	chr10	+	5912	3	FSM	ENSMUSG00000038587.11	ENSMUST00000215696.2	5931	3	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTATATTCACTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4297780	4309464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4297908_4303141_4307940_4308477
ENSMUSG00000038593.19_0	chr5	-	5701	14	FSM	ENSMUSG00000038593.19	ENSMUST00000111738.8	5717	14	8	8	8	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122402515	122375918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122379899_122380668_122380789_122383563_122383727_122384547_122384689_122385594_122385681_122385982_122386109_122386911_122387047_122388509_122388531_122389674_122389785_122392546_122392647_122395532_122395685_122396897_122397029_122399469_122399591_122402200
ENSMUSG00000038594.10_0	chr10	-	7392	13	FSM	ENSMUSG00000038594.10	ENSMUST00000220443.2	7425	13	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATAATTGCTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	53256018	53149546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_53154341_53157444_53157677_53159932_53160041_53167859_53167911_53168353_53168472_53172309_53172465_53174148_53174302_53177597_53177778_53188603_53188722_53195693_53195816_53224567_53225356_53234144_53234304_53255604
ENSMUSG00000038600.13_0	chr6	-	1368	10	FSM	ENSMUSG00000038600.13	ENST00000478480.2	1397	10	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTAGGTCTGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	38055873	38025932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38026019_38029944_38030053_38031489_38031592_38035659_38035877_38037904_38038024_38044671_38044766_38048783_38048942_38051056_38051197_38053620_38053772_38055680
ENSMUSG00000038604.10_0	chr8	+	4130	21	FSM	ENSMUSG00000038604.10	ENST00000379312.7	4137	21	6	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	106331890	106348862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106331983_106341030_106341158_106341260_106341426_106341574_106341654_106342148_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUSG00000038604.10_2	chr8	+	4076	22	FSM	ENSMUSG00000038604.10	ENSMUST00000043531.10	4108	22	5	27	5	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGAAAATAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106331891	106348824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106331983_106341030_106341158_106341272_106341426_106341574_106341654_106342059_106342084_106342175_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUSG00000038604.10_6	chr8	+	4017	20	FSM	ENSMUSG00000038604.10	ENST00000428437.6	4031	20	11	3	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGCTTGGTGCACTCCC	NA	NA	NA	NA	NA	NA	NA	NA	106341039	106348862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106341158_106341272_106341426_106341574_106341654_106342148_106342230_106342344_106342498_106342610_106342675_106342759_106342804_106342889_106343016_106343509_106343659_106343733_106343864_106343947_106345358_106345445_106345568_106346419_106346553_106346810_106346947_106347046_106347209_106347481_106347641_106347745_106347943_106348025_106348110_106348202_106348294_106348436
ENSMUSG00000038605.12_0	chr2	-	2143	5	FSM	ENSMUSG00000038605.12	ENSMUST00000060173.9	2164	5	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCCTCAGTGTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	181240987	181237013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181238399_181238539_181238681_181238964_181239137_181239220_181239403_181240724
ENSMUSG00000038607.13_0	chr4	+	1173	3	FSM	ENSMUSG00000038607.13	ENSMUST00000041160.13	1192	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2812	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAGCAGTAGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	59035097	59041894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59035319_59039226_59039359_59041074
ENSMUSG00000038611.18_0	chr7	+	5226	18	FSM	ENSMUSG00000038611.18	ENSMUST00000106027.9	5248	18	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTCTCATGGTACCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	140808717	140842533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140808805_140811139_140811256_140812331_140812455_140817409_140817616_140820797_140820882_140823690_140823810_140826759_140826858_140827133_140827310_140828292_140828423_140834776_140834905_140836410_140836593_140836715_140836836_140837256_140837412_140837944_140840621_140840872_140841028_140841125_140841456_140841688_140841818_140842321
ENSMUSG00000038612.17_0	chr3	+	1658	4	FSM	ENSMUSG00000038612.17	ENST00000620947.4	1676	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTTAATTATCCAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	95566007	95569047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95566267_95566677_95566799_95567071_95567320_95568017
ENSMUSG00000038612.17_1	chr3	+	3410	3	FSM	ENSMUSG00000038612.17	ENSMUST00000037947.15	3418	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTAAGGTGTGGTATGGG	NA	NA	NA	NA	NA	NA	NA	NA	95566106	95570487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95566799_95567071_95567320_95568017
ENSMUSG00000038615.18_0	chr11	-	3541	4	FSM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96714839	96708245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714770
ENSMUSG00000038615.18_1	chr11	-	3467	3	ISM	ENSMUSG00000038615.18	ENSMUST00000167110.8	3547	4	1699	6	1682	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96713140	96708245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_96711343_96712076_96712236_96712929
ENSMUSG00000038615.18_11	chr11	-	2155	4	FSM	ENSMUSG00000038615.18	ENST00000536222.5	2164	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGGGGGTGGACGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	96714814	96709993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714383
ENSMUSG00000038615.18_2	chr11	-	3523	4	FSM	ENSMUSG00000038615.18	ENSMUST00000169828.8	3530	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96714952	96708245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96714901
ENSMUSG00000038615.18_3	chr11	-	4579	5	FSM	ENSMUSG00000038615.18	ENSMUST00000167149.8	4596	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96720317	96708245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720236
ENSMUSG00000038615.18_4	chr11	-	4202	4	FSM	ENSMUSG00000038615.18	ENSMUST00000107658.8	4219	4	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGATGATTCAG	NA	NA	NA	NA	NA	NA	NA	NA	96718776	96708268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023
ENSMUSG00000038615.18_6	chr11	-	4642	5	FSM	ENSMUSG00000038615.18	ENSMUST00000081775.12	4654	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCACTTTCTCCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	96720788	96708245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96711343_96712076_96712236_96712929_96713146_96718023_96719050_96720644
ENSMUSG00000038618.13_0	chr7	+	1515	6	FSM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	3	7	3	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTCAGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	140795775	140798564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038618.13_5	chr7	+	1556	5	FSM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTCAGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	140795806	140798564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140795854_140796633_140796765_140796912_140797626_140797798_140798082_140798182
ENSMUSG00000038618.13_6	chr7	+	1440	5	ISM	ENSMUSG00000038618.13	ENSMUST00000046890.12	1525	6	858	7	824	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTCAGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	140796630	140798564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_140796765_140796912_140797626_140797798_140797931_140798002_140798082_140798182
ENSMUSG00000038618.13_9	chr7	+	1481	4	ISM	ENSMUSG00000038618.13	ENSMUST00000209500.2	1560	5	850	9	850	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAAAGGTGCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	140796656	140798559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_140796765_140796912_140797626_140797798_140798082_140798182
ENSMUSG00000038619.13_1	chr3	+	3828	3	FSM	ENSMUSG00000038619.13	ENSMUST00000037983.6	3845	3	13	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGGAAAAAACCAAAACTAG	NA	NA	NA	NA	NA	NA	NA	NA	95532343	95539409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95532488_95534059_95534186_95535851
ENSMUSG00000038619.13_2	chr3	+	538	3	FSM	ENSMUSG00000038619.13	ENST00000503241.1	558	3	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	4468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAGTCAGAGCTCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95532352	95536087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95532488_95534059_95534227_95535851
ENSMUSG00000038619.13_7	chr3	+	614	3	FSM	ENSMUSG00000038619.13	ENST00000361631.9	628	3	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAGATGTGGGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95534067	95539030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95534227_95535851_95536019_95538742
ENSMUSG00000038622.9_0	chr15	+	998	4	FSM	ENSMUSG00000038622.9	ENSMUST00000037115.9	1007	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCAGTTTTACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	52575846	52593960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_52576083_52582741_52582901_52584419_52584525_52593462
ENSMUSG00000038622.9_3	chr15	+	415	3	FSM	ENSMUSG00000038622.9	ENST00000522839.1	435	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAACTAAAGCGATATTT	NA	NA	NA	NA	NA	NA	NA	NA	52575912	52593548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_52576083_52582741_52582901_52593462
ENSMUSG00000038628.9_0	chr2	+	2932	3	FSM	ENSMUSG00000038628.9	ENSMUST00000039551.9	2948	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATTAGTGCATAT	NA	NA	NA	NA	NA	NA	NA	NA	181506139	181512617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181506363_181507738_181507827_181509996
ENSMUSG00000038633.6_0	chr1	-	2034	3	FSM	ENSMUSG00000038633.6	ENSMUST00000035295.6	2048	3	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3808	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAAAAGTGTCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	182110358	182103339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182104459_182106540_182107284_182110186
ENSMUSG00000038637.16_0	chr7	+	2502	13	FSM	ENSMUSG00000038637.16	ENSMUST00000070458.11	2502	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCTGCCTGGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	140774088	140789962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140774531_140775820_140775892_140776894_140777083_140778186_140778275_140779691_140779753_140785375_140785473_140785548_140785750_140786247_140786432_140786860_140787023_140787098_140787164_140787399_140787537_140787743_140787884_140789296
ENSMUSG00000038641.13_1	chr6	+	695	7	FSM	ENSMUSG00000038641.13	ENST00000411726.6	717	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTGAACATGGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	37509475	37544093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_37509582_37512963_37513081_37527140_37527219_37534423_37534534_37535303_37535470_37541356_37541440_37544058
ENSMUSG00000038642.11_1	chr3	+	864	6	FSM	ENSMUSG00000038642.11	ENST00000448301.7	879	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAACTAGGTTATAGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	95436758	95463605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95436872_95446031_95446155_95450323_95450474_95454106_95454273_95457363_95457467_95463396
ENSMUSG00000038644.15_0	chr7	-	3443	27	FSM	ENSMUSG00000038644.15	ENSMUST00000049343.15	3454	27	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTGTGTGTTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	44198264	44182173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192664_44192861_44198178
ENSMUSG00000038644.15_14	chr7	-	3446	27	FSM	ENSMUSG00000038644.15	ENST00000601098.6	3460	27	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGACACGGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44198216	44182213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192889_44198108
ENSMUSG00000038644.15_15	chr7	-	3291	27	FSM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGACACGGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44198227	44182213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192861_44198174
ENSMUSG00000038644.15_16	chr7	-	3304	26	FSM	ENSMUSG00000038644.15	ENST00000440232.7	3315	26	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGACACGGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44192854	44182213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671
ENSMUSG00000038644.15_21	chr7	-	3231	26	ISM	ENSMUSG00000038644.15	ENST00000613923.6	3295	27	5374	4	8	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGACACGGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44192853	44182213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187103_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671
ENSMUSG00000038644.15_27	chr7	-	3381	27	FSM	ENSMUSG00000038644.15	ENST00000599857.7	3385	27	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGACACGGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44198245	44182213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44182319_44182627_44182726_44182796_44182850_44183107_44183222_44183308_44183442_44183808_44183912_44183987_44184141_44184440_44184617_44185122_44185261_44185354_44185451_44187031_44187180_44187415_44187530_44187750_44187868_44188027_44188117_44188196_44188389_44188477_44188589_44188785_44188927_44189948_44190054_44190267_44190435_44190698_44190829_44190913_44190996_44191077_44191247_44191322_44191449_44191527_44191675_44192188_44192303_44192671_44192861_44198174
ENSMUSG00000038646.14_0	chr7	+	1437	3	FSM	ENSMUSG00000038646.14	ENSMUST00000042166.11	1452	3	8	7	8	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTACCTTTTAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81412680	81419232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_81412805_81417274_81417472_81418116
ENSMUSG00000038648.6_0	chr6	-	7067	12	FSM	ENSMUSG00000038648.6	ENSMUST00000041093.6	7082	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAAATGTTGCCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	37419073	37304196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_37309436_37311297_37311518_37312762_37312890_37313149_37313250_37330491_37330561_37331685_37331745_37332577_37332725_37335397_37335583_37339292_37339381_37340902_37341079_37356746_37356964_37418633
ENSMUSG00000038650.16_0	chr7	-	2076	10	FSM	ENSMUSG00000038650.16	ENSMUST00000106033.5	2091	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	5298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAGAAAGGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	140749129	140740245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748588
ENSMUSG00000038650.16_1	chr7	-	1642	10	FSM	ENSMUSG00000038650.16	ENSMUST00000167493.9	1656	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAGAAAGGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	140752761	140740245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140752654
ENSMUSG00000038650.16_2	chr7	-	1640	10	FSM	ENSMUSG00000038650.16	ENSMUST00000210314.2	1658	10	11	7	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAGAAAGGTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	140748591	140740245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140740479_140740562_140740734_140742336_140742508_140742764_140742936_140743020_140743192_140743266_140743438_140743920_140744092_140744416_140744588_140746595_140746701_140748486
ENSMUSG00000038656.6_0	chr5	-	767	3	ISM	ENSMUSG00000038656.6	ENST00000354829.7	808	4	439	12	439	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAACACAGGTAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	145387348	145377178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_145377330_145378763_145378991_145386959
ENSMUSG00000038656.6_1	chr5	-	797	4	FSM	ENSMUSG00000038656.6	ENST00000354829.7	808	4	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAACACAGGTAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	145387787	145377177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145377330_145378763_145378991_145386959_145387363_145387772
ENSMUSG00000038658.16_0	chr19	+	7166	26	FSM	ENSMUSG00000038658.16	ENSMUST00000043610.13	7190	26	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATAAGTCCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	29499695	29584219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_29500067_29510564_29510673_29518655_29518736_29539384_29539493_29544619_29544763_29544884_29545022_29546741_29546834_29548145_29548235_29552131_29552277_29553253_29553303_29554982_29555136_29557164_29557369_29561574_29561614_29561866_29561978_29563180_29563271_29563939_29564101_29565107_29565247_29572198_29572316_29572670_29573400_29575146_29575306_29575389_29575527_29577231_29577519_29578217_29578410_29579672_29579851_29579991_29580181_29581260
ENSMUSG00000038664.17_0	chr9	+	15134	78	FSM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATCAGAGTGGGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	66257816	66416047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_66257904_66279067_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349184_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ENSMUSG00000038664.17_22	chr9	+	15044	77	ISM	ENSMUSG00000038664.17	ENSMUST00000042824.13	15153	78	21259	14	21259	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGGAATCAGAGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	66279066	66416043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_66280024_66283598_66283695_66292274_66292470_66293880_66294193_66295442_66295540_66296036_66296181_66298641_66298770_66301941_66302087_66302209_66302382_66303917_66304053_66304534_66304701_66305119_66305246_66306539_66306762_66307049_66307203_66307328_66307462_66309805_66309998_66315265_66315488_66318297_66318472_66321356_66321472_66321560_66321682_66323465_66323638_66325677_66325991_66326410_66326532_66328278_66328331_66336092_66336362_66340557_66340774_66341005_66341127_66341347_66341586_66341692_66341881_66344876_66345033_66346459_66346567_66347077_66347189_66349184_66349362_66352734_66352975_66353366_66353451_66355293_66355815_66357984_66358761_66360618_66360818_66363217_66363379_66364718_66364836_66365475_66365708_66367689_66367815_66368981_66369203_66370110_66370380_66371987_66372041_66372662_66372864_66373780_66373956_66374664_66374936_66375041_66375256_66376259_66376466_66377519_66377648_66379127_66379256_66380664_66380866_66382015_66382147_66383202_66383403_66383609_66383716_66386226_66386374_66386712_66386815_66388143_66388318_66389085_66389380_66390938_66391005_66391159_66391286_66392180_66392320_66393348_66393531_66394205_66394362_66395230_66395354_66396611_66396715_66399239_66399410_66400437_66400577_66403181_66403352_66404450_66404621_66404870_66405037_66405961_66406039_66408457_66408711_66409211_66409365_66411869_66412176_66415420
ENSMUSG00000038664.17_27	chr9	+	538	3	NNC	ENSMUSG00000038664.17	novel	15153	78	NA	NA	67776	-60299	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGCAGCACATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	66325583	66355758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_66325880_66355338_66355439_66355616
ENSMUSG00000038668.15_0	chr4	-	3503	4	FSM	ENSMUSG00000038668.15	ENSMUST00000055018.11	3512	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553348	58435254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553133
ENSMUSG00000038668.15_1	chr4	-	3535	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107571.8	3543	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553303	58435254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58437635_58486476_58487225_58504621_58504859_58553133
ENSMUSG00000038668.15_2	chr4	-	3226	3	FSM	ENSMUSG00000038668.15	ENSMUST00000107570.2	3244	3	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58499385	58435254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58437635_58486476_58487225_58499287
ENSMUSG00000038668.15_5	chr4	-	3415	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107575.9	3421	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553547	58435254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553420
ENSMUSG00000038668.15_6	chr4	-	3430	4	FSM	ENSMUSG00000038668.15	ENSMUST00000107574.8	3437	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATGTGTGGTTCTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58553621	58435254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58437635_58486476_58487225_58504621_58504782_58553479
ENSMUSG00000038671.16_0	chr2	-	2459	7	FSM	ENSMUSG00000038671.16	ENSMUST00000170190.8	2483	7	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTACAACTATAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	181007178	180999487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181007011
ENSMUSG00000038671.16_1	chr2	-	2437	8	FSM	ENSMUSG00000038671.16	ENSMUST00000127988.8	2447	8	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGAGTTAGCCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	181007189	180999627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007011
ENSMUSG00000038671.16_2	chr2	-	1123	8	FSM	ENSMUSG00000038671.16	ENSMUST00000108808.8	1133	8	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAAAGGGTGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	181007137	181000895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181001355_181001431_181001533_181002793_181002865_181003183_181003266_181005806_181005890_181006103_181006192_181006397_181006505_181007005
ENSMUSG00000038679.17_0	chr15	-	3457	9	FSM	ENSMUSG00000038679.17	ENSMUST00000184885.8	3492	9	8	27	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAGATAATTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50746194	50523857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50694403_50695002_50695355_50709409_50709988_50710125_50710339_50727278_50727324_50746105
ENSMUSG00000038679.17_2	chr15	-	3375	8	ISM	ENSMUSG00000038679.17	ENSMUST00000184885.8	3492	9	18877	22	18877	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATTAAAAAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50727325	50523852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50694403_50695002_50695355_50709409_50709988_50710125_50710339_50727278
ENSMUSG00000038679.17_3	chr15	-	4422	7	FSM	ENSMUSG00000038679.17	ENSMUST00000077935.6	4436	7	0	14	0	-14	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAATAGATAATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50753437	50523860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_50525133_50528082_50528206_50685500_50686105_50694224_50695355_50709409_50710339_50752999_50753112_50753185
ENSMUSG00000038679.17_6	chr15	-	3401	2	FSM	ENSMUSG00000038679.17	ENSMUST00000183421.2	3446	2	43	2	43	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAGGGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50690874	50682896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_50686105_50690681
ENSMUSG00000038683.17_0	chr13	+	1704	10	FSM	ENSMUSG00000038683.17	ENSMUST00000046951.10	1722	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATACAGAGCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	41154508	41166483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41154890_41158212_41158376_41161491_41161613_41161686_41161762_41162361_41162415_41162694_41162841_41162923_41163022_41164658_41164759_41165809_41165934_41166040
ENSMUSG00000038685.19_20	chr2	+	3123	29	FSM	ENSMUSG00000038685.19	ENST00000508582.7	3132	29	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCAGGTAACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	180962634	180996226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180962851_180964104_180964304_180964593_180964688_180965075_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991778_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145
ENSMUSG00000038685.19_48	chr2	+	2810	28	FSM	ENSMUSG00000038685.19	ENST00000318100.9	2825	28	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCAGGTAACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	180964121	180996226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991778_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145
ENSMUSG00000038685.19_8	chr2	+	3040	29	FSM	ENSMUSG00000038685.19	ENST00000360203.11	3052	29	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCAGGTAACAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	180962637	180996226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180962851_180964104_180964304_180964593_180964688_180965155_180965238_180965476_180965538_180970395_180970472_180972585_180972671_180976704_180976771_180977685_180977840_180980848_180980888_180980955_180981035_180982288_180982387_180983317_180983374_180988624_180988700_180988805_180988888_180990967_180991101_180991255_180991370_180991461_180991503_180991687_180991778_180991925_180991997_180992427_180992506_180992819_180992967_180993044_180993161_180993368_180993493_180993595_180993747_180993833_180993974_180994545_180994642_180995769_180995969_180996145
ENSMUSG00000038690.16_1	chr5	-	944	4	FSM	ENSMUSG00000038690.16	ENSMUST00000161741.8	955	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTGTAGTCATTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	145128861	145120507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145120678_145121341_145121459_145123935_145124044_145128312
ENSMUSG00000038695.14_0	chr7	+	923	5	FSM	ENSMUSG00000038695.14	ENSMUST00000035844.11	930	5	6	1	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44117409	44121075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44117615_44118233_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUSG00000038695.14_1	chr7	+	664	4	FSM	ENSMUSG00000038695.14	ENSMUST00000206887.2	693	4	29	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTGGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	44117474	44121073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120838
ENSMUSG00000038695.14_2	chr7	+	855	5	FSM	ENSMUSG00000038695.14	ENSMUST00000117324.8	858	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGCCTGGGCTCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	44117449	44121075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44117584_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUSG00000038695.14_3	chr7	+	858	5	FSM	ENSMUSG00000038695.14	ENSMUST00000118628.8	864	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATTTGTGCCTGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	44117474	44121072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44117615_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUSG00000038695.14_5	chr7	+	903	6	FSM	ENSMUSG00000038695.14	ENSMUST00000118493.8	922	6	14	5	-8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACTGCTGCCTCAATAA	NA	NA	NA	NA	NA	NA	NA	NA	44117509	44121040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44117615_44117729_44117842_44118230_44118394_44119835_44119962_44120536_44120732_44120838
ENSMUSG00000038696.15_0	chr2	+	2839	10	FSM	ENSMUSG00000038696.15	ENST00000394063.5	2865	10	12	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATAAATACCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34296868	34514946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34297102_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_1	chr2	+	1529	8	FSM	ENSMUSG00000038696.15	ENST00000394060.7	1541	8	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAACCATCTGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	34296874	34443091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34297102_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34442816
ENSMUSG00000038696.15_10	chr2	+	3013	11	FSM	ENSMUSG00000038696.15	ENSMUST00000113126.3	3018	11	-5	10	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACCCTCTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34322031	34514952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038696.15_4	chr2	+	3100	12	FSM	ENSMUSG00000038696.15	ENSMUST00000147337.8	3111	12	2	9	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATACCCTCTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34297196	34514952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34297267_34322014_34322343_34325144_34325235_34334269_34334419_34387712_34387886_34408684_34408862_34423799_34423910_34453066_34453175_34471203_34471345_34487434_34487573_34509856_34509955_34513434
ENSMUSG00000038697.16_0	chr8	-	2898	5	FSM	ENSMUSG00000038697.16	ENSMUST00000093039.6	2912	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAAAAAAAATGTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	124747737	124723060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747599
ENSMUSG00000038697.16_1	chr8	-	2959	5	FSM	ENSMUSG00000038697.16	ENSMUST00000165628.9	2973	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTCAAAAAAAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	124748128	124723062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124724846_124729715_124730441_124734929_124735035_124736427_124736573_124747927
ENSMUSG00000038702.7_0	chr1	-	5716	2	FSM	ENSMUSG00000038702.7	ENSMUST00000035462.7	5759	2	23	20	23	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAACAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	111792625	111786455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_111791371_111791824
ENSMUSG00000038705.14_0	chr2	-	4102	10	FSM	ENSMUSG00000038705.14	ENSMUST00000049032.13	4121	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTCGTGTGTTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	180929815	180893247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180896217_180896934_180897058_180897287_180897426_180897664_180897737_180900776_180900935_180902087_180902192_180906773_180906902_180907607_180907706_180919741_180919915_180929676
ENSMUSG00000038708.11_0	chr9	+	1371	4	FSM	ENSMUSG00000038708.11	ENST00000444882.5	1388	4	11	6	-10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATAGTGTTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118335324	118411584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_118335626_118343247_118343338_118356077_118356390_118410916
ENSMUSG00000038708.11_3	chr9	+	7575	24	FSM	ENSMUSG00000038708.11	ENSMUST00000084820.6	7583	24	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAATAGTGTTCATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118335339	118411584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_118335626_118343247_118343338_118351585_118351652_118356077_118356390_118359341_118359390_118361611_118361669_118363674_118363774_118364409_118364543_118365826_118366012_118366309_118366394_118367944_118368093_118377690_118377870_118380899_118381032_118382502_118382659_118384640_118388852_118389369_118389492_118389809_118389941_118394624_118394736_118396026_118396048_118396248_118396318_118398031_118398108_118401985_118402090_118406209_118406297_118410916
ENSMUSG00000038712.17_0	chr3	+	2782	10	FSM	ENSMUSG00000038712.17	ENSMUST00000039537.14	2800	10	15	3	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	95190269	95203474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUSG00000038712.17_1	chr3	+	2810	10	FSM	ENSMUSG00000038712.17	ENSMUST00000107187.9	2827	10	14	3	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	95190268	95203474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95190937_95194955_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_5	chr3	+	2079	10	FSM	ENSMUSG00000038712.17	ENST00000312210.9	2096	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTCTTTCCTGAGATT	NA	NA	NA	NA	NA	NA	NA	NA	95190387	95203459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95190937_95195552_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202583_95202737_95202961
ENSMUSG00000038712.17_8	chr3	+	1810	9	FSM	ENSMUSG00000038712.17	ENSMUST00000168223.2	1812	9	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGCGTTCCTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	95195260	95203474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95195712_95198332_95198391_95198790_95198856_95199435_95199595_95199935_95200039_95200935_95201079_95202105_95202298_95202610_95202737_95202961
ENSMUSG00000038717.10_0	chr9	-	529	3	FSM	ENSMUSG00000038717.10	ENSMUST00000043675.9	544	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTAAGTTGAGTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	44832032	44824521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44824765_44825948_44826110_44831907
ENSMUSG00000038718.16_0	chr2	-	2713	8	FSM	ENSMUSG00000038718.16	ENSMUST00000113132.9	2734	8	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACTTACATGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	34262039	34061478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34062986_34065876_34065967_34068188_34068355_34094791_34094928_34103263_34103455_34114416_34114659_34260835_34260910_34261732
ENSMUSG00000038722.18_0	chr5	+	861	6	FSM	ENSMUSG00000038722.18	ENSMUST00000162594.8	867	6	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTTCTTTTAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	145077176	145084887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145077253_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000038722.18_2	chr5	+	741	6	FSM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	145077217	145084884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145077253_145078114_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000038722.18_3	chr5	+	898	6	FSM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCCTCGCTACATTCT	NA	NA	NA	NA	NA	NA	NA	NA	145077247	145084874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145077374_145078114_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000038722.18_4	chr5	+	786	5	ISM	ENSMUSG00000038722.18	ENSMUST00000160075.2	928	6	889	-6	889	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCTTTCTTTTAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	145078113	145084887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_145078247_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000038722.18_5	chr5	+	707	5	ISM	ENSMUSG00000038722.18	ENSMUST00000159018.8	741	6	896	0	889	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACATTCTTTCTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	145078113	145084884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_145078171_145079257_145079378_145081708_145081832_145083252_145083420_145084644
ENSMUSG00000038725.14_0	chr15	+	12740	77	FSM	ENSMUSG00000038725.14	ENST00000378402.10	12752	77	3	9	3	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACAACTGTAGGTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	44320929	44460518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_44321022_44322788_44322879_44329673_44329819_44330734_44330842_44340947_44341006_44342999_44343094_44347204_44347259_44347749_44347824_44348802_44348846_44352910_44352982_44354421_44354533_44356458_44356549_44358804_44359074_44359537_44359630_44361324_44361485_44361861_44361998_44362644_44362789_44363394_44363553_44364833_44364948_44366608_44366759_44367338_44367464_44368543_44368708_44368880_44369054_44374943_44375092_44376184_44376340_44378247_44378371_44379498_44379605_44381504_44381616_44383082_44383248_44384116_44384239_44385991_44386125_44386888_44387082_44388597_44388741_44389342_44389448_44390086_44390276_44391013_44391185_44391499_44391724_44392454_44393440_44396252_44396502_44397138_44397289_44399109_44399285_44400204_44400362_44400731_44400889_44402290_44402371_44403040_44403171_44404243_44404374_44406765_44407008_44408757_44408895_44409874_44410905_44414144_44414337_44417947_44418100_44419290_44419451_44420177_44420350_44421319_44421409_44421906_44422056_44423783_44423914_44425166_44425286_44426013_44426144_44427647_44427822_44429660_44429765_44431628_44431759_44432857_44432980_44433354_44433446_44436967_44437117_44437199_44437323_44437802_44437915_44437994_44438112_44441887_44442054_44445120_44445354_44445543_44445712_44448214_44448373_44449788_44449925_44452762_44453105_44455268_44455421_44457852_44458000_44458282_44458437_44460273
ENSMUSG00000038729.25_0	chr4	+	7211	5	FSM	ENSMUSG00000038729.25	ENSMUST00000107600.8	7231	5	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTTTTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57742108	57896976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57742474_57757600_57757684_57854561_57857038_57883023_57883203_57892868
ENSMUSG00000038729.25_1	chr4	+	6642	3	FSM	ENSMUSG00000038729.25	ENSMUST00000102903.8	6650	3	2	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTTTTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57845248	57896976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57845307_57854561_57857038_57892868
ENSMUSG00000038729.25_2	chr4	+	6824	4	FSM	ENSMUSG00000038729.25	ENSMUST00000107598.9	6830	4	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTTTTTCTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57845247	57896978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57845307_57854561_57857038_57883023_57883203_57892868
ENSMUSG00000038732.16_0	chr13	+	2882	13	FSM	ENSMUSG00000038732.16	ENSMUST00000047311.16	2905	13	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATTATTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	30320484	30430690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_30320746_30378518_30378665_30379692_30379771_30386307_30386404_30403618_30403675_30406356_30406412_30408365_30408550_30410255_30410449_30415946_30416051_30419672_30419738_30421945_30422079_30425146_30425299_30429331
ENSMUSG00000038733.15_0	chr1	-	7034	14	FSM	ENSMUSG00000038733.15	ENSMUST00000162819.9	7045	14	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAGTAATTCTCGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	181039540	181000800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181005397_181008868_181009055_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUSG00000038733.15_14	chr1	-	1057	2	FSM	ENSMUSG00000038733.15	ENST00000678307.1	1076	2	11	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATGAAGTCAGATACCC	NA	NA	NA	NA	NA	NA	NA	NA	181039535	181038137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181038300_181038640
ENSMUSG00000038733.15_7	chr1	-	2921	13	FSM	ENSMUSG00000038733.15	ENST00000678555.1	2931	13	5	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGGTTAACAGCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	181039541	181004728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181005397_181010333_181010464_181011291_181011371_181011815_181011962_181013512_181013633_181015170_181015312_181019325_181019465_181025139_181025297_181026411_181026510_181030588_181030726_181036567_181036673_181036777_181036878_181038640
ENSMUSG00000038736.11_0	chr15	-	5057	10	FSM	ENSMUSG00000038736.11	ENSMUST00000227843.2	5077	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGCATTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	44291259	44236568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263624_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ENSMUSG00000038736.11_5	chr15	-	2575	10	FSM	ENSMUSG00000038736.11	ENSMUST00000038719.8	2600	10	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGCTCATTGTTTAGAT	NA	NA	NA	NA	NA	NA	NA	NA	44291682	44239470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_44240083_44243455_44243616_44251864_44251991_44259906_44260052_44263415_44263621_44264677_44264861_44268744_44268926_44269205_44269389_44284114_44284270_44291057
ENSMUSG00000038738.16_0	chr7	+	6437	22	FSM	ENSMUSG00000038738.16	ENST00000359082.3	6453	22	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGATGGCTGGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	43962138	44006753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43962386_43962542_43962747_43963175_43963248_43965456_43965566_43965767_43965920_43968500_43968669_43969066_43969184_43974748_43974827_43975061_43975129_43975379_43975711_43976456_43976651_43982715_43982830_43982966_43983043_43991521_43991605_43991843_43991969_43992468_43992605_43993081_43993163_43993929_43993999_43994322_43994442_44000371_44000469_44000980_44004069_44006043
ENSMUSG00000038740.10_0	chr2	-	4993	10	FSM	ENSMUSG00000038740.10	ENSMUST00000041555.10	4998	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAGTTTGCTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	33777953	33619964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33623544_33642320_33642381_33645001_33645058_33692756_33692852_33715059_33715183_33717693_33717824_33724548_33724646_33730170_33730279_33764349_33764473_33777331
ENSMUSG00000038742.8_0	chr9	-	1573	6	FSM	ENSMUSG00000038742.8	ENSMUST00000043726.8	1582	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACACTGTGTCTGTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	20791017	20785106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20785369_20786461_20786733_20786809_20786998_20787687_20787866_20789344_20789900_20790898
ENSMUSG00000038751.6_0	chr2	-	1236	7	FSM	ENSMUSG00000038751.6	ENST00000217185.3	1247	7	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGGCCAGGACCCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	180844290	180837552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180837750_180838093_180838248_180838737_180838920_180840172_180840335_180840869_180841024_180841391_180841556_180844067
ENSMUSG00000038759.16_0	chr6	+	6381	43	FSM	ENSMUSG00000038759.16	ENSMUST00000201374.4	6411	43	24	6	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35154379	35224525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_35154585_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUSG00000038759.16_10	chr6	+	6242	43	FSM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	0	13	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35154544	35224525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222940_35223016_35224195
ENSMUSG00000038759.16_3	chr6	+	6405	43	FSM	ENSMUSG00000038759.16	ENSMUST00000043815.16	6412	43	1	6	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35154365	35224525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_35154595_35160783_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222956_35223016_35224195
ENSMUSG00000038759.16_32	chr6	+	6189	42	ISM	ENSMUSG00000038759.16	ENST00000285968.11	6255	43	6242	13	6223	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAACAAATGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	35160786	35224525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_35160927_35163367_35163540_35165558_35165704_35166030_35166191_35166789_35167019_35168808_35168974_35171339_35171516_35173368_35173486_35173653_35173792_35175770_35175922_35176788_35176995_35178920_35179104_35180897_35180949_35182259_35182470_35185015_35185116_35185729_35185868_35187762_35187953_35189661_35189783_35191252_35191335_35191580_35191746_35192008_35192134_35196619_35196735_35200447_35200598_35201080_35201153_35201456_35201615_35202118_35202200_35202724_35202917_35204237_35204506_35204599_35204699_35207438_35207588_35209332_35209525_35210270_35210393_35211612_35211752_35213700_35213828_35215879_35215957_35217943_35218073_35218253_35218384_35220753_35220921_35221631_35221756_35222182_35222312_35222940_35223016_35224195
ENSMUSG00000038762.16_0	chr17	-	3148	23	FSM	ENSMUSG00000038762.16	ENSMUST00000043757.15	3161	23	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCATGTGCCTGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	36280643	36267713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36268482_36268570_36268644_36268733_36268799_36268964_36269134_36269216_36269250_36269960_36270032_36270120_36270196_36270327_36270613_36270759_36270885_36271005_36271090_36271472_36271622_36271706_36271847_36271934_36272122_36272592_36272716_36272877_36272977_36274017_36274129_36274212_36274285_36274460_36274572_36274649_36274688_36274808_36274939_36275145_36275233_36275968_36276016_36280537
ENSMUSG00000038763.13_0	chr7	+	6364	14	FSM	ENSMUSG00000038763.13	ENSMUST00000107348.2	6369	14	4	1	4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCACGGTGTGATGATTA	NA	NA	NA	NA	NA	NA	NA	NA	80707351	80755359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80707521_80713696_80713736_80717626_80717749_80726620_80726739_80727293_80728582_80741894_80743933_80744654_80744803_80745149_80745278_80745405_80745442_80748494_80748770_80749918_80750008_80750655_80750880_80753092_80753142_80753718
ENSMUSG00000038764.15_0	chr4	-	6348	26	FSM	ENSMUSG00000038764.15	ENSMUST00000075637.11	6369	26	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACTGTTCTTGTCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	57301823	57190847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_57194363_57195701_57195838_57196350_57196497_57197505_57197635_57204906_57205054_57205884_57205947_57206213_57206305_57218508_57218670_57221897_57222055_57223618_57223676_57225505_57225584_57225713_57225901_57232321_57232499_57235221_57235357_57239527_57239701_57240785_57240850_57244974_57245064_57248657_57248746_57249907_57250029_57254916_57254970_57257974_57258020_57262428_57262508_57264865_57264909_57264982_57265091_57270022_57270178_57301671
ENSMUSG00000038765.15_0	chr2	-	2055	8	FSM	ENSMUSG00000038765.15	ENST00000373474.9	2070	8	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGTTCGTTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33531112	33454321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33454806_33455072_33455238_33456682_33456750_33456896_33456975_33457159_33457342_33459061_33459295_33529500_33529688_33530453
ENSMUSG00000038766.17_0	chr3	-	8254	8	FSM	ENSMUSG00000038766.17	ENSMUST00000098873.11	8272	8	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATGTCAGTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95116230	95089083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95096287_95096464_95096596_95097863_95098050_95107451_95107603_95111041_95111237_95111951_95112120_95113773_95113914_95116150
ENSMUSG00000038766.17_1	chr3	-	1494	6	FSM	ENSMUSG00000038766.17	ENSMUST00000107204.8	1539	6	39	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGCTGTGGAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	95125026	95110329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95111237_95111951_95112120_95113773_95113914_95116150_95116248_95123524_95123580_95124899
ENSMUSG00000038773.12_0	chr18	+	6354	24	FSM	ENSMUSG00000038773.12	ENSMUST00000043775.9	6363	24	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTTTGATCTCCAATAT	NA	NA	NA	NA	NA	NA	NA	NA	34910108	34971713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34910379_34926056_34926225_34927502_34927617_34928727_34928834_34929840_34929966_34932337_34932413_34936502_34937103_34941293_34942543_34943311_34943514_34945424_34945640_34946461_34946615_34952833_34952942_34955424_34955553_34956484_34956765_34957754_34958012_34960391_34960659_34961466_34961639_34961991_34962083_34962220_34962352_34963181_34963302_34964476_34964617_34966363_34966541_34967269_34967405_34970642
ENSMUSG00000038774.10_0	chr10	+	7741	42	FSM	ENSMUSG00000038774.10	ENSMUST00000035606.10	7760	42	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTCAGTCCTGTCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	50468776	50727574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_50468994_50480846_50480979_50484015_50484167_50493807_50494368_50514003_50514125_50518618_50518827_50521038_50521181_50521758_50521885_50525204_50525406_50525888_50526030_50526642_50526808_50535013_50535191_50536750_50536823_50566210_50566346_50576035_50576228_50576527_50576753_50583758_50583879_50586975_50587141_50589271_50589359_50590361_50590539_50592580_50592807_50594387_50594543_50596707_50596807_50597868_50598038_50604185_50604407_50606007_50606094_50607708_50607876_50608517_50608664_50608782_50608904_50611305_50611449_50624901_50625040_50625130_50625252_50626548_50626682_50630092_50630219_50643186_50643299_50643468_50643604_50699731_50699957_50716393_50716546_50718238_50718387_50721626_50721837_50725566_50725743_50726556
ENSMUSG00000038775.15_0	chr9	+	2420	17	FSM	ENSMUSG00000038775.15	ENST00000383759.7	2434	17	13	1	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGGAACCCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	118887391	118900314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_118887585_118889412_118889522_118890544_118890656_118890962_118891163_118891509_118891589_118891673_118891773_118892315_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899883_118900201
ENSMUSG00000038775.15_5	chr9	+	1599	11	FSM	ENSMUSG00000038775.15	ENST00000465644.5	1609	11	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGGGAACCCTGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	118892345	118900314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_118892452_118892669_118892771_118894526_118894665_118894927_118895087_118895768_118895949_118896478_118896625_118897379_118897525_118898950_118899137_118899350_118899418_118899624_118899883_118900201
ENSMUSG00000038776.14_0	chr1	-	1726	9	FSM	ENSMUSG00000038776.14	ENSMUST00000036928.12	1741	9	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGTGTGGGCCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	180845123	180817122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821653_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ENSMUSG00000038776.14_1	chr1	-	1691	9	FSM	ENSMUSG00000038776.14	ENSMUST00000111068.8	1699	9	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTGTGTGGGCCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	180845130	180817122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180817546_180817957_180818084_180819497_180819607_180821443_180821611_180822192_180822323_180823513_180823742_180827287_180827469_180829363_180829552_180844991
ENSMUSG00000038777.20_0	chr3	+	3918	20	FSM	ENSMUSG00000038777.20	ENSMUST00000090821.10	3933	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95067824	95081329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95068024_95069925_95069975_95070742_95070833_95071649_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95075897_95076018_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079565
ENSMUSG00000038777.20_1	chr3	+	3587	17	FSM	ENSMUSG00000038777.20	ENSMUST00000107217.6	3595	17	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCACATCAGCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95071618	95081329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95071825_95074316_95074432_95074723_95074788_95074934_95074992_95075309_95075412_95075609_95075701_95076119_95076209_95076474_95076693_95076892_95077025_95077298_95077452_95077628_95077803_95078061_95078209_95078483_95078562_95078644_95078701_95078868_95078914_95079101_95079198_95079565
ENSMUSG00000038780.15_0	chr5	-	5405	19	FSM	ENSMUSG00000038780.15	ENSMUST00000110677.8	5420	19	9	6	9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCTTTTTCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	144902640	144813310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144830889_144830968_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ENSMUSG00000038780.15_4	chr5	-	5315	18	FSM	ENSMUSG00000038780.15	ENSMUST00000085684.11	5343	18	19	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTTTACATTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	144902638	144813320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_144816267_144817434_144817520_144818427_144818630_144819316_144819438_144820378_144820517_144821392_144821572_144823171_144823287_144826508_144826613_144828124_144828324_144829970_144830118_144831283_144831369_144833299_144833542_144834792_144834869_144835956_144836023_144836174_144836309_144837986_144838096_144839349_144839389_144902310
ENSMUSG00000038781.8_0	chr17	-	1470	13	FSM	ENSMUSG00000038781.8	ENSMUST00000043785.8	1509	13	23	16	23	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACCAAACCTAAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	56312561	56304092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56304362_56304459_56304535_56304604_56304698_56304777_56304952_56306742_56306809_56306912_56307016_56307086_56307157_56307479_56307615_56307900_56308002_56309011_56309069_56309852_56309976_56310129_56310202_56312429
ENSMUSG00000038782.8_0	chr7	-	1267	5	FSM	ENSMUSG00000038782.8	ENSMUST00000237383.2	1306	5	33	6	33	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTCTCAGTATCTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	43896086	43879355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_43880066_43880205_43880335_43880749_43880897_43881779_43881981_43896006
ENSMUSG00000038784.14_0	chr6	-	3263	11	FSM	ENSMUSG00000038784.14	ENSMUST00000114989.9	3279	11	14	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCCTCGGGTGAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	35110615	34999002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35000368_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUSG00000038784.14_1	chr6	-	3447	12	FSM	ENSMUSG00000038784.14	ENSMUST00000114993.9	3473	12	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACTTGATGGTGACCC	NA	NA	NA	NA	NA	NA	NA	NA	35110609	34999016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35000368_35001062_35001276_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUSG00000038784.14_2	chr6	-	3312	11	FSM	ENSMUSG00000038784.14	ENSMUST00000044163.10	3337	11	22	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAAGATGATGCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	35110628	35021892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041823_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUSG00000038784.14_3	chr6	-	3283	11	FSM	ENSMUSG00000038784.14	ENSMUST00000202417.2	3296	11	7	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACCAAAAAGAAATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35110652	35021936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35023294_35027996_35028495_35029776_35030027_35033145_35033204_35041832_35041958_35045522_35045649_35046304_35046407_35047151_35047239_35054915_35055114_35056895_35057162_35110436
ENSMUSG00000038797.14_0	chr7	+	1842	3	ISM	ENSMUSG00000038797.14	ENST00000546148.6	1871	4	11	2048	11	-240	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGCCGGGGCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	80510682	80525892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_80510809_80512912_80513420_80524683
ENSMUSG00000038797.14_11	chr7	+	1928	2	FSM	ENSMUSG00000038797.14	ENST00000327179.6	1945	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGGCAGAAAAGAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	80512929	80526124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_80513417_80524683
ENSMUSG00000038797.14_12	chr7	+	1203	1	ISM	ENSMUSG00000038797.14	ENST00000546148.6	1871	4	14018	2048	8	-240	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGCCGGGGCTCCATT	NA	NA	NA	NA	NA	NA	NA	NA	80524689	80525892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_80524700_80525900
ENSMUSG00000038803.8_0	chr5	-	1126	3	FSM	ENSMUSG00000038803.8	ENSMUST00000132253.5	1144	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCTTAATGAAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	31065121	31063235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31064111_31064742_31064881_31065008
ENSMUSG00000038803.8_1	chr5	-	551	2	FSM	ENSMUSG00000038803.8	ENSMUST00000132034.5	576	2	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGATATATATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	31065055	31063872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31064111_31064742
ENSMUSG00000038806.8_0	chr1	+	3195	7	FSM	ENSMUSG00000038806.8	ENSMUST00000038091.8	3213	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAGCAATTGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	180678698	180695667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180678858_180683367_180683486_180685687_180685800_180687465_180687636_180688662_180688784_180689922_180690407_180693636
ENSMUSG00000038811.14_0	chr11	+	536	3	FSM	ENSMUSG00000038811.14	ENST00000300406.6	544	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCCCCACACCCATC	NA	NA	NA	NA	NA	NA	NA	NA	95735869	95736819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95735967_95736308_95736689_95736760
ENSMUSG00000038812.17_0	chr19	+	943	5	FSM	ENSMUSG00000038812.17	ENSMUST00000088257.14	957	5	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAATATACATTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	6887073	6888411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6887224_6887321_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038812.17_2	chr19	+	965	4	FSM	ENSMUSG00000038812.17	ENSMUST00000116551.10	985	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAAAAGCGGTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	6887124	6888386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6887631_6887730_6887833_6887951_6888042_6888119
ENSMUSG00000038816.15_0	chr4	-	3649	19	FSM	ENSMUSG00000038816.15	ENSMUST00000045142.15	3664	19	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAACTCATACCGACT	NA	NA	NA	NA	NA	NA	NA	NA	56865181	56810942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_56812389_56812510_56812595_56813177_56813292_56813829_56813887_56816180_56816230_56816988_56817144_56817246_56817298_56822517_56822556_56826273_56826425_56827251_56827345_56829483_56829643_56832905_56832993_56835177_56835379_56837731_56837903_56838965_56839056_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ENSMUSG00000038816.15_4	chr4	-	813	5	FSM	ENSMUSG00000038816.15	ENSMUST00000107612.3	850	5	19	18	19	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTGTAATGCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	56865135	56840763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_56840920_56841560_56841681_56844446_56844635_56847809_56848000_56864976
ENSMUSG00000038822.16_0	chr10	+	3051	19	FSM	ENSMUSG00000038822.16	ENST00000369125.6	3073	19	11	11	-1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTATCTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	45453923	45588351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038822.16_17	chr10	+	3761	24	FSM	ENSMUSG00000038822.16	ENSMUST00000037044.13	3785	24	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGTAATGTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	45453940	45588433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45454247_45464475_45464531_45465576_45465667_45466363_45466469_45481604_45481681_45494593_45494726_45514416_45514500_45524686_45524784_45524949_45525052_45525976_45526084_45528683_45528835_45546441_45546777_45547227_45547297_45547534_45547623_45548423_45548536_45548634_45548733_45548869_45548958_45552476_45552627_45553162_45553360_45562697_45562830_45576672_45576772_45577049_45577121_45585976_45586091_45587529
ENSMUSG00000038827.12_0	chr4	+	4265	6	FSM	ENSMUSG00000038827.12	ENSMUST00000045368.12	4275	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTGGCTTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	56802354	56809597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_56802727_56803595_56803648_56804153_56804284_56805681_56805759_56805877_56805948_56806033
ENSMUSG00000038828.14_0	chr5	+	6087	17	FSM	ENSMUSG00000038828.14	ENSMUST00000201203.4	6110	17	8	15	8	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGACAGAAAATATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31025363	31036509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31027163_31027932_31028133_31028763_31028915_31029064_31029200_31029415_31029499_31029844_31029951_31030030_31030113_31030386_31030489_31030838_31030981_31031299_31031392_31031656_31031706_31031880_31031995_31032194_31032313_31033133_31033231_31033390_31033560_31033706_31033853_31034007
ENSMUSG00000038831.17_0	chr2	-	2726	20	FSM	ENSMUSG00000038831.17	ENSMUST00000091039.5	2738	20	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCGTGTCTTGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	33261478	33026984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33027722_33031006_33031099_33033055_33033162_33033311_33033405_33035409_33035516_33036581_33036666_33045299_33045352_33047783_33047942_33048921_33049049_33058192_33058261_33062429_33062524_33064422_33064561_33150489_33150617_33163572_33163666_33166157_33166248_33174836_33174921_33214664_33214716_33226524_33226633_33230724_33230846_33261281
ENSMUSG00000038836.16_0	chr6	+	3694	19	FSM	ENSMUSG00000038836.16	ENSMUST00000115017.8	3719	19	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACTCGTAAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34757384	34834860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34757995_34759034_34759154_34760504_34760566_34762125_34762312_34770816_34770925_34775128_34775268_34776067_34776845_34780377_34780547_34789766_34789894_34791318_34791420_34791645_34791759_34799952_34800020_34801654_34801736_34805126_34805185_34809439_34809512_34813747_34813794_34816259_34816445_34823689_34823919_34834414
ENSMUSG00000038836.16_2	chr6	+	785	4	FSM	ENSMUSG00000038836.16	ENSMUST00000115014.8	805	4	14	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTCAGCTCAGATTATT	NA	NA	NA	NA	NA	NA	NA	NA	34757837	34762573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34757995_34759034_34759154_34760504_34760566_34762125
ENSMUSG00000038836.16_3	chr6	+	2367	15	FSM	ENSMUSG00000038836.16	ENST00000436302.6	2384	15	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGCAACAGCATCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	34759045	34823901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34759154_34760504_34760566_34762125_34762312_34770816_34770925_34775128_34775268_34776067_34776845_34780377_34780547_34789766_34789894_34791318_34791420_34791645_34791759_34799952_34800020_34801666_34801736_34805126_34805185_34809439_34809512_34823689
ENSMUSG00000038838.16_0	chr17	-	4408	29	FSM	ENSMUSG00000038838.16	ENSMUST00000043674.15	4425	29	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAAGAAACATGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	35978478	35966536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970153_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971402_35971615_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ENSMUSG00000038838.16_7	chr17	-	3224	29	FSM	ENSMUSG00000038838.16	ENST00000541562.6	3240	29	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTGCTTGCTATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35978175	35967415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35967545_35967627_35967751_35967841_35968018_35968098_35968211_35969023_35969231_35969918_35970072_35970151_35970282_35970366_35970446_35970543_35970613_35970691_35970797_35970893_35971020_35971105_35971177_35971295_35971394_35971611_35971692_35971767_35971845_35972466_35972549_35972793_35972898_35972994_35973123_35973895_35973987_35974353_35974443_35974962_35975075_35975387_35975508_35975662_35975745_35976677_35976776_35976864_35976932_35977022_35977145_35977546_35977648_35977735_35977818_35977964
ENSMUSG00000038844.11_0	chr2	-	6371	27	FSM	ENSMUSG00000038844.11	ENSMUST00000230763.2	6404	27	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAGTACAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	142743416	142459403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142556981_142557015_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ENSMUSG00000038844.11_1	chr2	-	6354	26	FSM	ENSMUSG00000038844.11	ENSMUST00000043589.8	6383	26	19	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCACAGTACAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	142743432	142459403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_142461837_142490347_142490432_142514208_142514299_142532498_142532622_142544542_142544594_142545861_142545959_142549178_142549332_142553614_142554959_142556598_142556653_142581442_142581532_142582828_142582912_142598008_142598147_142599816_142599869_142600709_142600830_142675996_142676057_142679436_142679503_142688848_142689025_142689910_142690043_142690212_142690382_142691783_142691927_142695546_142695657_142696353_142696452_142699230_142699348_142704346_142704461_142707263_142707334_142743244
ENSMUSG00000038845.12_0	chr11	+	1785	7	FSM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCACTCGGGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95557789	95571592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95557869_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_10	chr11	+	1726	7	FSM	ENSMUSG00000038845.12	ENST00000504124.6	1735	7	9	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCCCGAGGGCTGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	95557843	95571496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95557960_95558862_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038845.12_22	chr11	+	1707	6	ISM	ENSMUSG00000038845.12	ENSMUST00000125172.8	1799	7	1079	7	1017	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCACTCGGGGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	95558861	95571592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_95558978_95562212_95562375_95565967_95566111_95566395_95566513_95568876_95568973_95570519
ENSMUSG00000038848.15_0	chr2	-	3171	5	FSM	ENSMUSG00000038848.15	ENSMUST00000037299.15	3184	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAAGCTTGTGTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	180562734	180546174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180547462_180552479_180554001_180560927_180561008_180562104_180562130_180562476
ENSMUSG00000038859.8_0	chr5	-	3228	14	FSM	ENSMUSG00000038859.8	ENSMUST00000055190.8	3247	14	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACACATTTGAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	144294913	144201345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_144202843_144203417_144203456_144212582_144212776_144214454_144214527_144215337_144215549_144217629_144217778_144218799_144218968_144221253_144221407_144222267_144222406_144222884_144222957_144223059_144223122_144255738_144255826_144261366_144261443_144294600
ENSMUSG00000038860.16_0	chr2	-	3559	29	FSM	ENSMUSG00000038860.16	ENSMUST00000102810.10	3578	29	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTACTGCCTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	32977246	32876235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32977093
ENSMUSG00000038860.16_2	chr2	-	3539	30	FSM	ENSMUSG00000038860.16	ENSMUST00000137381.8	3551	30	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTATTCTCTGCAACCC	NA	NA	NA	NA	NA	NA	NA	NA	33021441	32876390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32876843_32879517_32879645_32880575_32880792_32882134_32882274_32885058_32885178_32887667_32887776_32892790_32892858_32893795_32893955_32895060_32895240_32896809_32896927_32897260_32897360_32901411_32901524_32905197_32905273_32906696_32906802_32908512_32908629_32912673_32912781_32913500_32913547_32916091_32916201_32921081_32921186_32924042_32924142_32924721_32924798_32931454_32931482_32935499_32935564_32936595_32936661_32942107_32942227_32944169_32944270_32954015_32954091_32975886_32975957_32994864_32995036_33021324
ENSMUSG00000038861.15_0	chr3	+	3675	11	FSM	ENSMUSG00000038861.15	ENSMUST00000072287.12	3692	11	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACCACAAGCAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94882050	94914146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94882397_94891293_94892231_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038861.15_2	chr3	+	2872	12	FSM	ENSMUSG00000038861.15	ENSMUST00000107251.9	2895	12	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCACCTCTTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	94882209	94913457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94882397_94891293_94892231_94896613_94896659_94900276_94900505_94901471_94901700_94903145_94903256_94903890_94903996_94904162_94904287_94906158_94906425_94911550_94911684_94911944_94912066_94913069
ENSMUSG00000038866.16_0	chr1	+	5783	14	FSM	ENSMUSG00000038866.16	ENSMUST00000118196.8	5796	14	0	13	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACAGCCTAAGAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	105918135	105961791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_105919438_105928660_105928773_105931829_105931907_105933744_105933817_105939431_105939545_105943728_105943824_105945948_105946033_105947577_105947636_105949455_105949589_105950929_105950995_105951393_105951489_105955132_105955262_105957481_105958964_105959825
ENSMUSG00000038871.6_0	chr6	+	2208	3	FSM	ENSMUSG00000038871.6	ENSMUST00000045372.6	2220	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGTTCTAAATCATTG	NA	NA	NA	NA	NA	NA	NA	NA	34453150	34482545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34453358_34464224_34464886_34481205
ENSMUSG00000038872.11_0	chr8	+	17136	16	FSM	ENSMUSG00000038872.11	ENSMUST00000220518.2	17152	16	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACATTAAAAAAAATATGA	NA	NA	NA	NA	NA	NA	NA	NA	108669275	109688246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_108669333_108860048_108860117_109051668_109051930_109244277_109244365_109371328_109371427_109400873_109401235_109430393_109430868_109518833_109521602_109526826_109527324_109583353_109583586_109641153_109641262_109660163_109660298_109660440_109660642_109671733_109671837_109672948_109678403_109682013
ENSMUSG00000038872.11_3	chr8	+	17076	15	ISM	ENSMUSG00000038872.11	ENSMUST00000220518.2	17152	16	190778	14	190778	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTAAAAAAAATATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	108860053	109688248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_108860117_109051668_109051930_109244277_109244365_109371328_109371427_109400873_109401235_109430393_109430868_109518833_109521602_109526826_109527324_109583353_109583586_109641153_109641262_109660163_109660298_109660440_109660642_109671733_109671837_109672948_109678403_109682013
ENSMUSG00000038872.11_5	chr8	+	16412	10	FSM	ENSMUSG00000038872.11	ENSMUST00000043896.10	16433	10	5	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACATTAAAAAAAATATGA	NA	NA	NA	NA	NA	NA	NA	NA	109441280	109688246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_109441963_109518833_109521602_109526826_109527324_109583353_109583586_109641153_109641262_109660163_109660298_109660440_109660642_109671733_109671837_109672948_109678403_109682013
ENSMUSG00000038876.13_12	chr10	-	1932	3	FSM	ENSMUSG00000038876.13	ENST00000368314.6	1938	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTTTTTAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29238037	29222115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29223880_29230333_29230444_29237979
ENSMUSG00000038876.13_13	chr10	-	1870	2	ISM	ENSMUSG00000038876.13	ENST00000368314.6	1938	3	7600	4	3270	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGCTTTTTTAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29230439	29222115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_29223880_29230333
ENSMUSG00000038876.13_15	chr10	-	1939	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160372.9	1948	3	6	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGAAATAATTTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29238037	29222174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29223880_29230287_29230444_29237959
ENSMUSG00000038876.13_8	chr10	-	4299	3	FSM	ENSMUSG00000038876.13	ENSMUST00000160144.9	4323	3	16	8	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACATTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	29238422	29220179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29223880_29230287_29230444_29237979
ENSMUSG00000038876.13_9	chr10	-	4392	4	FSM	ENSMUSG00000038876.13	ENSMUST00000037548.11	4402	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAACATTTTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	29238434	29220179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29223880_29230287_29230444_29237280_29237342_29237959
ENSMUSG00000038880.14_0	chr17	+	900	3	FSM	ENSMUSG00000038880.14	ENSMUST00000043907.14	918	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACAGCCTGTGTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25114099	25115255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25114463_25114635_25114679_25114761
ENSMUSG00000038880.14_1	chr17	+	670	3	FSM	ENSMUSG00000038880.14	ENST00000177742.7	688	3	16	2	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTGGCAGAGAGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25114156	25115059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25114463_25114635_25114679_25114738
ENSMUSG00000038884.15_1	chr9	+	1677	8	FSM	ENSMUSG00000038884.15	ENSMUST00000043911.8	1683	8	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTAATAGCCTTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	20779943	20785603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20780233_20780625_20780750_20780899_20780950_20782492_20782532_20782671_20782822_20784163_20784268_20784405_20784561_20784837
ENSMUSG00000038886.11_0	chr7	-	6533	24	FSM	ENSMUSG00000038886.11	ENSMUST00000098346.5	6554	24	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCAGAGATGTGCAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	80021108	79998850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80001600_80002673_80002782_80002909_80003111_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340_80019494_80020479_80020678_80020849
ENSMUSG00000038886.11_5	chr7	-	3606	22	FSM	ENSMUSG00000038886.11	ENST00000559717.6	3613	22	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAACAGTCCTTACATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	80019469	80001285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80001600_80002673_80002782_80002905_80003096_80006089_80006227_80007990_80008133_80008657_80008792_80009027_80009143_80009383_80009507_80010643_80010881_80012046_80012213_80012356_80012425_80012636_80012752_80012901_80013085_80013214_80013418_80013675_80013854_80016616_80016804_80017058_80017233_80017444_80017573_80017961_80018134_80018253_80018399_80018467_80018726_80019340
ENSMUSG00000038888.9_0	chr7	+	2470	3	FSM	ENSMUSG00000038888.9	ENSMUST00000038332.9	2475	3	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATGTTTTTGGTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	43321441	43327719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43321500_43324527_43325071_43325850
ENSMUSG00000038888.9_2	chr7	+	1043	3	FSM	ENSMUSG00000038888.9	ENST00000421832.3	1043	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAAGTTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43321446	43326307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43321504_43324541_43325071_43325850
ENSMUSG00000038888.9_4	chr7	+	985	2	ISM	ENSMUSG00000038888.9	ENST00000421832.3	1043	3	3096	0	3096	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCTGCAAGTTGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	43324542	43326307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_43325071_43325850
ENSMUSG00000038893.13_0	chr11	+	2311	8	FSM	ENSMUSG00000038893.13	ENSMUST00000037502.7	2317	8	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTTGGGTTTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95227845	95272694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95228088_95254824_95254995_95262263_95262360_95265807_95265919_95266454_95266590_95268308_95268508_95269644_95269796_95271487
ENSMUSG00000038894.8_0	chr8	-	6308	2	FSM	ENSMUSG00000038894.8	ENSMUST00000040514.8	6323	2	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAATGAATACAGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	11058453	11034690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11037015_11054469
ENSMUSG00000038895.17_0	chr9	-	2091	9	FSM	ENSMUSG00000038895.17	ENSMUST00000043922.7	2108	9	17	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTAAGCCTGGATAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	21982624	21966755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21967190_21967288_21967389_21967709_21967825_21968582_21968695_21968796_21968975_21969099_21969712_21976996_21977213_21979443_21979488_21982344
ENSMUSG00000038900.18_0	chr2	+	1200	7	FSM	ENSMUSG00000038900.18	ENSMUST00000126610.2	1242	7	29	13	29	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	4581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCAAACCCAGTGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	32851599	32854495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32851852_32852060_32852135_32852585_32852685_32852996_32853079_32853508_32853596_32853752_32853866_32854002
ENSMUSG00000038902.15_0	chr3	+	6391	19	FSM	ENSMUSG00000038902.15	ENSMUST00000107270.9	6399	19	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACAATTTTCTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94744877	94789629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94768106_94768283_94769732_94769842_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUSG00000038902.15_1	chr3	+	5956	17	FSM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTGACAATTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	94745023	94789625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94745052_94761260_94761386_94763353_94763513_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUSG00000038902.15_2	chr3	+	5934	16	ISM	ENSMUSG00000038902.15	ENSMUST00000107269.2	5966	17	16235	6	16235	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACAATTTTCTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	94761258	94789629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94761386_94763353_94763513_94771398_94771690_94771768_94771979_94777390_94777498_94778298_94778637_94779583_94779739_94781904_94782006_94782410_94782558_94783946_94784082_94784224_94784395_94784546_94784688_94785241_94785299_94785466_94785580_94785832_94785858_94785971
ENSMUSG00000038903.14_0	chr18	+	1612	11	FSM	ENSMUSG00000038903.14	ENSMUST00000043929.11	1618	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCACAGTCTCATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	70058538	70102551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_70058692_70071912_70072042_70073170_70073258_70076798_70076934_70079494_70079621_70080121_70080251_70089052_70089136_70093471_70093578_70094530_70094615_70099860_70099938_70102048
ENSMUSG00000038909.17_0	chr11	-	3549	15	FSM	ENSMUSG00000038909.17	ENSMUST00000107734.10	3560	15	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	95201062	95165085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95182345_95182436_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ENSMUSG00000038909.17_1	chr11	-	3461	14	FSM	ENSMUSG00000038909.17	ENSMUST00000107733.10	3470	14	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGACTGCTCTGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	95201064	95165085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95190804_95191045_95193958_95194136_95196874_95197023_95200860
ENSMUSG00000038909.17_12	chr11	-	1760	13	FSM	ENSMUSG00000038909.17	ENST00000509773.5	1773	13	10	3	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCACCCCCTCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	95201019	95166501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95193958_95194136_95196874_95197023_95200860
ENSMUSG00000038909.17_8	chr11	-	1752	12	FSM	ENSMUSG00000038909.17	ENST00000510819.5	1768	12	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTCCCACCTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	95201007	95166320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_95166714_95167268_95167376_95168294_95168442_95171216_95171311_95172326_95172468_95172664_95172755_95174854_95175047_95177155_95177267_95180597_95180697_95185388_95185472_95196874_95197023_95200860
ENSMUSG00000038910.8_0	chr17	+	4171	6	FSM	ENSMUSG00000038910.8	ENSMUST00000043938.8	4185	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCTCCAATAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	50816437	50995505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_50816966_50913322_50915810_50918019_50918224_50947143_50947220_50975026_50975137_50994739
ENSMUSG00000038914.16_0	chr2	-	8705	16	FSM	ENSMUSG00000038914.16	ENSMUST00000087517.10	8723	16	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTCTTGTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	180344133	180299764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180304377_180311183_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ENSMUSG00000038914.16_10	chr2	-	4869	6	FSM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTCTGATATCGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	180344123	180322874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ENSMUSG00000038914.16_5	chr2	-	4280	15	FSM	ENSMUSG00000038914.16	ENSMUST00000103056.10	4281	15	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTAGACACATAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	180344143	180311006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180311380_180312057_180312148_180312653_180312808_180313184_180313708_180314075_180314212_180315023_180315129_180315267_180315385_180316483_180316644_180316760_180317221_180325601_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180343753
ENSMUSG00000038914.16_7	chr2	-	4607	6	FSM	ENSMUSG00000038914.16	ENSMUST00000103055.8	4613	6	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGTATCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180351789	180322853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656_180333842_180351702
ENSMUSG00000038914.16_8	chr2	-	4521	5	ISM	ENSMUSG00000038914.16	ENSMUST00000130986.8	4898	6	10301	-12	10301	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTTTGTATCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180333842	180322853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_180325822_180326756_180326970_180329268_180329591_180330616_180331449_180333656
ENSMUSG00000038930.12_0	chr7	-	1116	7	FSM	ENSMUSG00000038930.12	ENST00000394258.6	1140	7	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGCTGAACTATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79970766	79966657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79966799_79967200_79967231_79968606_79968775_79968988_79969090_79969839_79969962_79970049_79970447_79970609
ENSMUSG00000038932.14_0	chr2	-	1411	5	FSM	ENSMUSG00000038932.14	ENST00000217162.5	1428	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTGAGTATTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	180284449	180277052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_180277189_180280196_180280444_180282093_180282257_180282673_180282858_180283768
ENSMUSG00000038936.14_0	chr1	+	1931	12	FSM	ENSMUSG00000038936.14	ENSMUST00000040538.10	1948	12	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGACTTTTTCCCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	179495786	179514749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179496111_179498147_179498261_179503955_179504037_179505605_179505736_179506444_179506495_179507149_179507281_179508056_179508175_179508997_179509118_179509215_179509273_179511769_179511882_179513260_179513343_179514136
ENSMUSG00000038943.17_0	chr7	+	3009	14	FSM	ENSMUSG00000038943.17	ENSMUST00000163812.9	3026	14	9	8	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79944206	79965999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79964861
ENSMUSG00000038943.17_11	chr7	+	2996	14	FSM	ENSMUSG00000038943.17	ENSMUST00000047558.14	3016	14	12	8	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79944210	79965999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960920_79961964_79962076_79962779_79962957_79964861
ENSMUSG00000038943.17_17	chr7	+	2902	14	FSM	ENSMUSG00000038943.17	ENSMUST00000173824.8	2912	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79944236	79965999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962880_79964861
ENSMUSG00000038943.17_27	chr7	+	3001	15	FSM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	3	4	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTACACTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	79944255	79965998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79944340_79950048_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUSG00000038943.17_51	chr7	+	2920	14	ISM	ENSMUSG00000038943.17	ENSMUST00000174172.8	3008	15	5794	3	5794	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACTACACTGTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	79950046	79965999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_79950182_79950784_79950908_79954108_79954343_79954428_79954600_79955665_79955816_79956122_79956271_79957306_79957444_79959140_79959237_79960488_79960636_79960817_79960929_79961964_79962076_79962779_79962957_79963274_79963317_79964861
ENSMUSG00000038949.9_0	chr1	+	4694	11	FSM	ENSMUSG00000038949.9	ENSMUST00000040706.9	4709	11	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCAACAAAATGTCTCCG	NA	NA	NA	NA	NA	NA	NA	NA	179373937	179455031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179374182_179406902_179407334_179420249_179420432_179429266_179429298_179432083_179432171_179432517_179432633_179433812_179433835_179434001_179434099_179437350_179438232_179450331_179450468_179452563
ENSMUSG00000038949.9_2	chr1	+	627	4	FSM	ENSMUSG00000038949.9	ENST00000366511.1	644	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGAAAGGCTGTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	179374040	179432107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179374182_179406902_179407334_179429266_179429298_179432083
ENSMUSG00000038949.9_3	chr1	+	599	3	ISM	ENSMUSG00000038949.9	ENST00000366511.1	644	4	13	2818	13	-2818	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTCTACCTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	179374044	179429297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_179374182_179406902_179407334_179429266
ENSMUSG00000038954.15_0	chr17	+	1498	12	FSM	ENSMUSG00000038954.15	ENSMUST00000050630.14	1508	12	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGAGTGGCCTGCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45088047	45430176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45088316_45097496_45097598_45234065_45234151_45302620_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45352102_45352274_45359168_45359280_45430029
ENSMUSG00000038954.15_10	chr17	+	632	6	ISM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	2584	7	2584	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACAGTGCGTAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	45305203	45359272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45359168
ENSMUSG00000038954.15_8	chr17	+	712	7	FSM	ENSMUSG00000038954.15	ENST00000637763.2	727	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCACAGTGCGTAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	45302627	45359272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45302708_45305203_45305295_45313976_45314117_45344124_45344201_45347598_45347712_45348962_45349071_45359168
ENSMUSG00000038957.14_0	chr9	+	5691	7	FSM	ENSMUSG00000038957.14	ENSMUST00000043990.14	5708	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTTTAGACTCCAACT	NA	NA	NA	NA	NA	NA	NA	NA	57615833	57659776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57615983_57620663_57620845_57623230_57623551_57634468_57634805_57647172_57647327_57651867_57652086_57655443
ENSMUSG00000038963.16_0	chr2	+	2998	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038259.13	3010	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTCTAAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	180098047	180116658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180098167_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ENSMUSG00000038963.16_3	chr2	+	3084	12	FSM	ENSMUSG00000038963.16	ENSMUST00000038225.8	3101	12	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTATGTCTAAGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	180102786	180116658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180102992_180105733_180106622_180107389_180107481_180108850_180108973_180109359_180109472_180112896_180113052_180113846_180114043_180114197_180114364_180114453_180114627_180114895_180114961_180115306_180115456_180115896
ENSMUSG00000038965.18_0	chr16	-	2889	5	FSM	ENSMUSG00000038965.18	ENSMUST00000232139.2	2906	5	7	10	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTAGATTGGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	17020506	16969886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298_17019498_17020359
ENSMUSG00000038965.18_1	chr16	-	2601	4	FSM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTAGATTGGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	17019356	16969886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16972147_16977853_16978041_16994275_16994372_17019298
ENSMUSG00000038965.18_2	chr16	-	2537	3	ISM	ENSMUSG00000038965.18	ENSMUST00000090192.12	2609	4	24991	8	24969	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACATTAGATTGGGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	16994365	16969886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_16972147_16977853_16978041_16994275
ENSMUSG00000038967.14_0	chr11	-	2227	11	FSM	ENSMUSG00000038967.14	ENSMUST00000038431.8	2246	11	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGACTGCTGCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	94932169	94917091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94918149_94918690_94918805_94919304_94919413_94919523_94919623_94919747_94919825_94920479_94920558_94920742_94920833_94922661_94922847_94923290_94923363_94930174_94930317_94931964
ENSMUSG00000038975.15_0	chr3	-	1367	9	FSM	ENSMUSG00000038975.15	ENSMUST00000089950.11	1381	9	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	153618642	153612935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561_153617670_153618570
ENSMUSG00000038975.15_1	chr3	-	1296	8	FSM	ENSMUSG00000038975.15	ENSMUST00000167111.6	1418	8	112	10	-19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCAGTGGCTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	153617670	153612935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_153613379_153613691_153613842_153614426_153614553_153614985_153615097_153615182_153615236_153615897_153616004_153616327_153616526_153617561
ENSMUSG00000038975.15_10	chr3	-	997	9	FSM	ENSMUSG00000038975.15	ENST00000462549.1	1009	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGTCAGATGGGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	153617645	153613243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_153613305_153613740_153613842_153614426_153614553_153614985_153615097_153615182_153615285_153615690_153615799_153615897_153616004_153616327_153616526_153617561
ENSMUSG00000038976.13_0	chr11	+	4469	10	FSM	ENSMUSG00000038976.13	ENSMUST00000038696.12	4508	10	34	5	34	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCGTCGCCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94881894	94897720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94883745_94887360_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ENSMUSG00000038976.13_2	chr11	+	3069	9	FSM	ENSMUSG00000038976.13	ENSMUST00000107748.2	3095	9	21	5	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCCTCGTCGCCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94886910	94897720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94887494_94888819_94888941_94891032_94891138_94892044_94892181_94892667_94892821_94892904_94892959_94895386_94895617_94895846_94895944_94896130
ENSMUSG00000038982.11_0	chr13	-	5613	5	FSM	ENSMUSG00000038982.11	ENSMUST00000035899.8	5634	5	12	9	-5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAGTCAACAAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	38819073	38782825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38788005_38796618_38796678_38803065_38803196_38814968_38815052_38818911
ENSMUSG00000038987.9_0	chr2	-	1695	9	FSM	ENSMUSG00000038987.9	ENSMUST00000102813.2	1730	9	29	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTCATTGCAGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	32674411	32667398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32667582_32667839_32668030_32668128_32668296_32668958_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038987.9_6	chr2	-	1583	8	FSM	ENSMUSG00000038987.9	ENST00000614677.1	1601	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGATCTGCCAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	32674402	32667867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32668030_32668128_32668393_32668947_32669110_32669301_32669433_32669720_32669989_32670653_32670808_32671365_32671638_32674232
ENSMUSG00000038990.15_0	chr2	-	2953	10	FSM	ENSMUSG00000038990.15	ENSMUST00000108891.2	2975	10	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATACTTCCTTGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	179915272	179900337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179901977_179902067_179902273_179902436_179902544_179902869_179902974_179903308_179903475_179903909_179904019_179904870_179904949_179906006_179906100_179906195_179906268_179914892
ENSMUSG00000038991.18_0	chr13	-	2826	10	FSM	ENSMUSG00000038991.18	ENSMUST00000035988.16	2843	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCAGTCTGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	38712456	38684061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712163
ENSMUSG00000038991.18_17	chr13	-	2576	10	FSM	ENSMUSG00000038991.18	ENSMUST00000160653.2	2586	10	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	38711884	38684252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38711650
ENSMUSG00000038991.18_18	chr13	-	2602	10	FSM	ENSMUSG00000038991.18	ENSMUST00000162075.8	2619	10	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	38712787	38684252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38685685_38687406_38687537_38688699_38688783_38690924_38691066_38691869_38691957_38694102_38694219_38697043_38697141_38702958_38703065_38707304_38707455_38712527
ENSMUSG00000039000.9_0	chr5	+	5032	23	FSM	ENSMUSG00000039000.9	ENSMUST00000049453.9	5048	23	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCACTGGTCAGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29774252	29881087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_29774579_29792272_29792327_29794885_29794961_29795807_29795955_29802066_29802183_29803856_29804015_29805638_29805793_29806129_29806351_29807193_29807346_29811904_29812093_29819905_29819993_29824225_29824384_29824552_29824786_29836189_29836295_29837747_29837836_29840628_29840727_29842635_29842769_29851407_29851656_29863207_29863421_29868460_29868650_29868773_29868841_29872911_29873043_29879396
ENSMUSG00000039001.13_0	chr2	+	383	6	FSM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTAAGTCTGCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	179899171	179900229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179899241_179899413_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ENSMUSG00000039001.13_11	chr2	+	313	5	ISM	ENSMUSG00000039001.13	ENSMUST00000059080.7	394	6	245	9	245	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTAAGTCTGCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	179899414	179900229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_179899477_179899580_179899645_179899778_179899851_179900022_179900079_179900170
ENSMUSG00000039005.14_0	chr4	+	4055	3	FSM	ENSMUSG00000039005.14	ENSMUST00000048096.12	4077	3	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTGAAACAATCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	66745829	66761024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_66746159_66752130_66752298_66757465
ENSMUSG00000039007.11_0	chr15	+	1904	8	FSM	ENSMUSG00000039007.11	ENSMUST00000042167.10	1923	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGAGACCAATTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	33083284	33594689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_33083469_33212961_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039007.11_4	chr15	+	1835	9	FSM	ENSMUSG00000039007.11	ENSMUST00000228916.2	1842	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTCTGATTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	33083397	33594643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_33083469_33154304_33154395_33212961_33213410_33250071_33250280_33302485_33302694_33381481_33381594_33466771_33466864_33497308_33497511_33594239
ENSMUSG00000039016.6_0	chr9	+	508	2	FSM	ENSMUSG00000039016.6	ENSMUST00000044051.6	518	2	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTGTTCTTCTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	50515217	50516618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50515340_50516232
ENSMUSG00000039018.16_0	chr7	+	1590	11	NNC	ENSMUSG00000039018.16	novel	1595	11	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGTTTTCATTGTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	139717484	139730699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_139717687_139718231_139718297_139720105_139720214_139723650_139723732_139724253_139724311_139724542_139724634_139725910_139725973_139726723_139726821_139727165_139727248_139729660_139729774_139730067
ENSMUSG00000039031.17_0	chr10	+	3628	15	FSM	ENSMUSG00000039031.17	ENSMUST00000039557.9	3651	15	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAATTAAGTCCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	26648488	26794637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_26648693_26721927_26722125_26725870_26726107_26730869_26730934_26736552_26736729_26745916_26746083_26748668_26748761_26753152_26753231_26754886_26755047_26756683_26756767_26763776_26763984_26765727_26765869_26788602_26788728_26792388_26792451_26793000
ENSMUSG00000039033.12_0	chr2	-	2456	14	FSM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTATGGTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	139908662	139675405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908406
ENSMUSG00000039033.12_2	chr2	-	2118	13	FSM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACTGGGTATGGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	139908705	139675408	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUSG00000039033.12_3	chr2	-	2079	12	ISM	ENSMUSG00000039033.12	ENSMUST00000099304.4	2127	13	9296	6	9271	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTATGGTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	139899409	139675405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_139676368_139699621_139699696_139725691_139725803_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206
ENSMUSG00000039033.12_4	chr2	-	2252	14	FSM	ENSMUSG00000039033.12	ENSMUST00000110079.9	2258	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTATGGTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	139908725	139675405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206_139899420_139908673
ENSMUSG00000039033.12_5	chr2	-	2189	13	ISM	ENSMUSG00000039033.12	ENSMUST00000046656.9	2480	14	9272	6	9272	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTATGGTGTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	139899408	139675405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_139676368_139699621_139699696_139725691_139725803_139752452_139752564_139789076_139789156_139793379_139793500_139819526_139819634_139827048_139827129_139837992_139838078_139850618_139850740_139884013_139884083_139890161_139890230_139899206
ENSMUSG00000039041.16_0	chr2	+	1524	10	FSM	ENSMUSG00000039041.16	ENSMUST00000061437.5	1535	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATGGTCTGGGCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	179813287	179818078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179813482_179813826_179814041_179814648_179814766_179815702_179815827_179816101_179816189_179816657_179816740_179816952_179817186_179817390_179817549_179817646_179817750_179817866
ENSMUSG00000039043.6_0	chr7	-	2264	6	FSM	ENSMUSG00000039043.6	ENSMUST00000048731.6	2277	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATAAGACTGAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	79585098	79575112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79576599_79577373_79577538_79577919_79578127_79579320_79579454_79581550_79581627_79584900
ENSMUSG00000039046.16_0	chr2	+	7475	15	FSM	ENSMUSG00000039046.16	ENSMUST00000114937.8	7484	15	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTCTGCGATGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	6327478	6451193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_6327766_6341178_6341271_6395865_6395934_6399283_6399367_6405090_6405131_6413739_6413821_6419743_6419852_6425713_6425824_6428232_6428282_6429082_6429204_6431705_6431801_6432362_6432429_6432522_6432623_6435236_6435390_6445171
ENSMUSG00000039047.18_0	chr3	+	4711	11	FSM	ENSMUSG00000039047.18	ENSMUST00000159899.8	4737	11	11	15	-2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGGAAAAGAAAACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	152419747	152494648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152419865_152422698_152422753_152428121_152428214_152443822_152443959_152445765_152445878_152448125_152448223_152450081_152450200_152450350_152450462_152453237_152453411_152472075_152472161_152491032
ENSMUSG00000039048.16_0	chr9	-	2256	11	FSM	ENSMUSG00000039048.16	ENSMUST00000127996.8	2289	11	7	26	7	-26	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35122344	35115529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35116420_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ENSMUSG00000039048.16_1	chr9	-	2201	11	FSM	ENSMUSG00000039048.16	ENSMUST00000043805.15	2232	11	0	31	0	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATAAATCTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35122276	35115534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35116438_35116600_35116706_35116884_35117015_35117155_35117317_35117518_35117596_35118774_35118877_35119187_35119283_35120333_35120453_35120711_35120826_35121240_35121462_35122102
ENSMUSG00000039050.9_0	chr2	+	2788	14	FSM	ENSMUSG00000039050.9	ENSMUST00000040668.9	2805	14	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCCAACATGGGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	179761108	179804466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179761263_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ENSMUSG00000039050.9_18	chr2	+	1426	13	FSM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGAGCCCAGGAGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	179778861	179803387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179778906_179780044_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ENSMUSG00000039050.9_21	chr2	+	1375	12	ISM	ENSMUSG00000039050.9	ENST00000358053.3	1429	13	1193	0	1193	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGAGCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	179780054	179803390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179799621_179799746_179800821_179800913_179803281
ENSMUSG00000039050.9_4	chr2	+	1539	13	FSM	ENSMUSG00000039050.9	ENST00000439951.6	1549	13	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCAGGAGCAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	179761165	179803390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179761271_179778771_179778906_179780005_179780151_179782897_179782974_179786624_179786760_179786881_179786980_179790218_179790402_179791971_179792080_179792808_179792899_179794991_179795116_179797059_179797201_179800821_179800913_179803281
ENSMUSG00000039055.5_0	chr11	-	2122	8	FSM	ENSMUSG00000039055.5	ENST00000393271.6	2138	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGTGGAGCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94541768	94535827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538609_94538769_94538889_94538968_94539056_94540833_94540965_94541048
ENSMUSG00000039055.5_4	chr11	-	2420	9	FSM	ENSMUSG00000039055.5	ENSMUST00000039949.5	2444	9	18	6	18	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCTGTGGAGCTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94544772	94535827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94536432_94536641_94536832_94538116_94538233_94538453_94538575_94538769_94538889_94538968_94539056_94540833_94540965_94541048_94541850_94544521
ENSMUSG00000039058.12_0	chr3	-	256	2	FSM	ENSMUSG00000039058.12	ENST00000478255.1	275	2	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATGCACAACTAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	152178573	152169581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_152169654_152178389
ENSMUSG00000039062.16_0	chr7	-	3784	21	FSM	ENSMUSG00000039062.16	ENSMUST00000107392.8	3797	21	5	8	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGAGCTTCCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	79497953	79471558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385_79492409_79497892
ENSMUSG00000039062.16_1	chr7	-	3409	20	FSM	ENSMUSG00000039062.16	ENSMUST00000049004.8	3422	20	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTAAAATGAGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	79492100	79471564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79472125_79475050_79475133_79475453_79475595_79476339_79476508_79476618_79476730_79477319_79477412_79483334_79483483_79484877_79484934_79485034_79485169_79485716_79485791_79485978_79486155_79487989_79488056_79488160_79488227_79488394_79488539_79488635_79488750_79488910_79489066_79489149_79489277_79490620_79490758_79490833_79490977_79491385
ENSMUSG00000039063.6_0	chr2	-	1836	5	FSM	ENSMUSG00000039063.6	ENSMUST00000042658.5	1851	5	15	0	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCGTCTATCCACCTAACT	NA	NA	NA	NA	NA	NA	NA	NA	6217829	6193275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6194463_6200393_6200595_6211225_6211324_6213278_6213401_6217601
ENSMUSG00000039065.12_0	chr15	+	1159	5	FSM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTATAACCGTGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	31602263	31617676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_31602296_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_1	chr15	+	2364	6	FSM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCTGGCCTCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31602263	31618755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_31602296_31603594_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_2	chr15	+	2321	5	ISM	ENSMUSG00000039065.12	ENSMUST00000161061.3	2364	6	1342	0	1342	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTCTCCTGGCCTCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31603605	31618755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_31603721_31606056_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039065.12_3	chr15	+	1117	4	ISM	ENSMUSG00000039065.12	ENSMUST00000042702.7	1164	5	3803	5	3803	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTATAACCGTGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	31606066	31617676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_31606335_31608241_31608380_31609711_31609763_31617016
ENSMUSG00000039067.6_0	chr8	-	1571	7	FSM	ENSMUSG00000039067.6	ENSMUST00000044106.6	1581	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTGTGTCCTAGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108315086	108307012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108307952_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039067.6_10	chr8	-	632	7	FSM	ENSMUSG00000039067.6	ENST00000567958.5	651	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAAGACCAATGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	108315025	108307733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108307795_108309013_108309106_108310804_108310886_108311494_108311593_108312336_108312430_108313256_108313349_108314910
ENSMUSG00000039068.17_0	chr3	+	2654	13	FSM	ENSMUSG00000039068.17	ENSMUST00000106103.8	2674	13	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATAGAAAGCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	152101124	152165106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152101221_152125651_152125778_152128254_152128409_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_1	chr3	+	7561	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106100.9	7607	14	29	17	29	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAGAAAGAATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	152101668	152168446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152101776_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_10	chr3	+	4114	13	ISM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	23328	8	23318	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATAGAAAGCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	152125648	152165106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_11	chr3	+	7461	13	ISM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	23318	13	23318	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAGAATCATCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	152125648	152168450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_12	chr3	+	2472	11	ISM	ENSMUSG00000039068.17	ENSMUST00000200570.5	2491	12	23889	6	23327	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTTAAAAGTCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	152125657	152165183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_152125778_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_4	chr3	+	4183	14	FSM	ENSMUSG00000039068.17	ENSMUST00000089982.11	4197	14	6	8	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATAGAAAGCTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	152102326	152165106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154652_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039068.17_8	chr3	+	7522	14	FSM	ENSMUSG00000039068.17	ENSMUST00000106101.2	7539	14	0	17	0	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAGAAAGAATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	152102330	152168446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152102399_152125651_152125778_152128254_152128409_152132913_152134470_152152435_152152575_152154415_152154564_152154649_152154766_152155281_152155354_152156246_152156349_152156939_152157036_152157627_152157781_152161456_152161592_152163505_152163607_152163890
ENSMUSG00000039069.20_0	chr2	+	1431	7	FSM	ENSMUSG00000039069.20	ENSMUST00000108901.8	1444	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	179713591	179727688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179713680_179720411_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUSG00000039069.20_5	chr2	+	1343	6	FSM	ENSMUSG00000039069.20	ENSMUST00000087563.7	1346	6	-4	7	-4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATATGGATGTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	179720411	179727688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179720617_179723878_179724027_179725137_179725254_179725856_179726076_179726243_179726383_179727172
ENSMUSG00000039081.11_0	chr14	-	4201	3	FSM	ENSMUSG00000039081.11	ENSMUST00000043409.9	4216	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTATTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	22039658	22034030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_22036585_22037271_22038353_22039092
ENSMUSG00000039084.9_0	chr11	+	1654	4	FSM	ENSMUSG00000039084.9	ENST00000258969.4	1661	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACATTCACCTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	94455899	94459943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94456695_94458623_94458788_94459034_94459192_94459405
ENSMUSG00000039086.10_0	chr2	+	4311	11	FSM	ENSMUSG00000039086.10	ENSMUST00000041126.9	4343	11	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTACCTCATTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	179684325	179711986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179684662_179694256_179694334_179695101_179695187_179696811_179696957_179697493_179697692_179699377_179699543_179699880_179699983_179701128_179701222_179703702_179703823_179705063_179705192_179709124
ENSMUSG00000039087.18_16	chr13	+	7193	10	ISM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	3665	6	3665	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGGGGTTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38076524	38135029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_2	chr13	+	7274	11	FSM	ENSMUSG00000039087.18	ENST00000349384.10	7285	11	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGGGGTTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38072864	38135029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_38072949_38076527_38076635_38077747_38077961_38082387_38082478_38083599_38083764_38099997_38100137_38100434_38100572_38112098_38112289_38113533_38116466_38130832_38131640_38132618
ENSMUSG00000039087.18_21	chr13	+	3536	3	FSM	ENSMUSG00000039087.18	ENST00000611109.1	3551	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCCAGGAGTGGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38115211	38134093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_38116466_38130832_38131640_38132618
ENSMUSG00000039089.16_0	chr10	-	4545	22	FSM	ENSMUSG00000039089.16	ENSMUST00000040219.13	4572	22	21	6	21	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCAGATTCTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	26249931	26150374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26249696
ENSMUSG00000039089.16_2	chr10	-	3404	22	FSM	ENSMUSG00000039089.16	ENSMUST00000174766.2	3411	22	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTACCAAAAAAAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	26251180	26151355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_26152162_26155514_26155578_26155835_26156312_26158677_26158758_26168538_26168692_26178550_26178654_26179520_26179636_26189744_26189856_26191389_26191476_26194274_26194352_26203584_26203737_26206072_26206165_26207717_26207854_26212130_26212236_26213665_26213758_26215116_26215202_26216805_26216939_26218405_26218566_26220074_26220150_26220509_26220622_26228156_26228274_26251105
ENSMUSG00000039096.11_0	chr11	-	4125	9	FSM	ENSMUSG00000039096.11	ENSMUST00000040487.4	4143	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGACAGACCTGCGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	94440015	94430631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94433474_94433706_94433811_94434119_94434175_94434380_94434529_94434930_94434995_94435245_94435612_94438984_94439190_94439296_94439431_94439808
ENSMUSG00000039099.8_0	chr7	+	1879	14	FSM	ENSMUSG00000039099.8	ENST00000268130.12	1892	14	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGGTAAGAGCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79398927	79427046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79399168_79399712_79399906_79402195_79402261_79405680_79405760_79408157_79408274_79418076_79418192_79419088_79419261_79420725_79420797_79421264_79421352_79422148_79422269_79423100_79423315_79425259_79425324_79426377_79426535_79426860
ENSMUSG00000039100.11_0	chr15	-	6252	26	FSM	ENSMUSG00000039100.11	ENSMUST00000090227.6	6260	26	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTGGCTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	31531191	31456036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_31459426_31462087_31462224_31465399_31465533_31467835_31467926_31469688_31469824_31471762_31471945_31475891_31475962_31478440_31478643_31480430_31480569_31482643_31482745_31482949_31483070_31485091_31485227_31486069_31486145_31486227_31486297_31486500_31486582_31488937_31488997_31490721_31490774_31492884_31492918_31494216_31494279_31496149_31496340_31498719_31498889_31501061_31501135_31502865_31503010_31505830_31505905_31509871_31509969_31530948
ENSMUSG00000039103.13_0	chr3	-	2544	13	FSM	ENSMUSG00000039103.13	ENSMUST00000046045.13	2564	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAAGGTCCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151971942	151942625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151943217_151943301_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151960921_151961003_151971853
ENSMUSG00000039103.13_1	chr3	-	2385	10	FSM	ENSMUSG00000039103.13	ENSMUST00000199470.5	2392	10	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAAGGTCCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151971404	151942625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151958444_151958594_151958687_151958767_151959248_151959441_151960921_151961003_151971349
ENSMUSG00000039103.13_16	chr3	-	2143	11	FSM	ENSMUSG00000039103.13	ENST00000334785.12	2164	11	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGACTTAATCTTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	151959430	151943123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151959248
ENSMUSG00000039103.13_28	chr3	-	2002	12	ISM	ENSMUSG00000039103.13	ENSMUST00000199423.5	2016	13	0	99	0	-14	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAACTAATTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	151960948	151943301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151953569_151953741_151953816_151954006_151955296_151955339_151958444_151958594_151958687_151958767_151959248_151959441_151960921
ENSMUSG00000039103.13_3	chr3	-	2328	9	ISM	ENSMUSG00000039103.13	ENSMUST00000199470.5	2392	10	10404	7	-52	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAAGGTCCTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	151961000	151942625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_151943660_151943883_151944070_151948295_151948518_151949462_151949661_151952722_151952912_151958444_151958594_151958687_151958767_151959248_151959441_151960921
ENSMUSG00000039105.7_0	chr4	+	1118	3	FSM	ENSMUSG00000039105.7	ENSMUST00000035301.7	1135	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	10084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAGATGTTGAGCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	63463018	63468980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63463237_63466821_63466923_63468181
ENSMUSG00000039105.7_1	chr4	+	386	3	FSM	ENSMUSG00000039105.7	ENST00000679150.1	400	3	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGATAGGAGGTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	63463158	63468345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63463237_63466821_63466923_63468138
ENSMUSG00000039105.7_2	chr4	+	804	2	FSM	ENSMUSG00000039105.7	ENST00000677452.1	821	2	4	13	4	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAGTAAAAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	63463158	63468907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63463237_63468181
ENSMUSG00000039108.15_0	chr2	+	2525	9	FSM	ENSMUSG00000039108.15	ENSMUST00000055485.12	2534	9	0	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTTCAAGTGCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	179666779	179677245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179667106_179668427_179668592_179669692_179669829_179673153_179673322_179673586_179673665_179673853_179674016_179674293_179674445_179675478_179675664_179676090
ENSMUSG00000039114.17_0	chr13	-	1605	3	FSM	ENSMUSG00000039114.17	ENSMUST00000037623.15	1619	3	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGGGGTGTCGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36918440	36909601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_36910831_36914080_36914226_36918209
ENSMUSG00000039116.8_0	chr10	-	4312	24	ISM	ENSMUSG00000039116.8	ENSMUST00000208429.3	4326	25	0	1775	0	-1775	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTCATTCTTAGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	14421403	14285416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_14285570_14286199_14286302_14296169_14296454_14298416_14298514_14302479_14302749_14303833_14303962_14307349_14307457_14308664_14308711_14310021_14310142_14312523_14312665_14314163_14314336_14315353_14315565_14316081_14316138_14317136_14317249_14319749_14319893_14323806_14323873_14324561_14324615_14326322_14326409_14331881_14331966_14333823_14333893_14342876_14343501_14344506_14344849_14411597_14411699_14420657
ENSMUSG00000039117.17_0	chr2	-	4394	15	FSM	ENSMUSG00000039117.17	ENSMUST00000041618.13	4416	15	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATTTGTCACGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	179618424	179553951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573772_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ENSMUSG00000039117.17_2	chr2	-	4339	15	FSM	ENSMUSG00000039117.17	ENSMUST00000227325.2	4380	15	34	7	34	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATTTGTCACGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	179618405	179553951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_179555400_179562944_179563065_179563703_179563761_179564746_179564873_179565771_179565903_179566209_179566380_179568008_179568124_179571069_179571218_179573808_179574019_179574755_179574846_179576821_179576945_179577684_179577805_179580203_179580324_179581586_179581748_179617205
ENSMUSG00000039126.11_0	chr19	+	12484	20	FSM	ENSMUSG00000039126.11	ENSMUST00000087689.5	12512	20	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACACATTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16933501	17201288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_16933657_16977302_16977408_16980985_16981189_16983985_16984150_16993571_16993722_16997922_16998018_17090950_17091107_17095406_17101957_17102301_17103068_17145626_17145707_17156153_17156355_17170619_17170794_17176476_17176580_17177144_17177277_17179005_17179093_17185594_17185694_17189041_17189078_17189655_17189695_17193689_17193738_17198147
ENSMUSG00000039128.14_0	chr2	-	1812	13	FSM	ENSMUSG00000039128.14	ENSMUST00000043864.9	1827	13	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAATGCTTGCTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5849963	5799107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5799692_5800359_5800498_5803171_5803301_5808757_5808787_5809721_5809845_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039128.14_15	chr2	-	863	11	FSM	ENSMUSG00000039128.14	ENST00000378900.6	875	11	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGGTAGAGTACATGGA	NA	NA	NA	NA	NA	NA	NA	NA	5849727	5800365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5800498_5803171_5803301_5808757_5808787_5812241_5812318_5815606_5815656_5826086_5826194_5827912_5828009_5837891_5837925_5838466_5838525_5846763_5846836_5849645
ENSMUSG00000039130.19_0	chr6	-	1803	10	FSM	ENSMUSG00000039130.19	ENSMUST00000080812.14	1824	10	13	8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTCCTGCTGCTAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	30391009	30366386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30366745_30370263_30370471_30372736_30372950_30373241_30373483_30374763_30374919_30375937_30376066_30381779_30381864_30382535_30382687_30387419_30387532_30390855
ENSMUSG00000039131.16_0	chr3	-	1579	6	FSM	ENSMUSG00000039131.16	ENSMUST00000046614.10	1596	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAACAGCTTTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	151871859	151799484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151799933_151808255_151808338_151813577_151813685_151833672_151833854_151843209_151843396_151871284
ENSMUSG00000039137.19_0	chr4	-	3994	12	FSM	ENSMUSG00000039137.19	ENSMUST00000063650.10	4016	12	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGGGGGCCAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	63414172	63333152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUSG00000039137.19_1	chr4	-	3986	12	FSM	ENSMUSG00000039137.19	ENSMUST00000102867.8	4013	12	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGGGGGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63414170	63333155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63333904_63334238_63334362_63334648_63334828_63336324_63336860_63337658_63337731_63350086_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUSG00000039137.19_2	chr4	-	2409	7	FSM	ENSMUSG00000039137.19	ENSMUST00000095037.2	2419	7	1	9	1	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGGTTGGGGGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	63414187	63333155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63333904_63334238_63334362_63334648_63334831_63336324_63336860_63337658_63337731_63350086_63350297_63413648
ENSMUSG00000039137.19_3	chr4	-	2767	7	FSM	ENSMUSG00000039137.19	ENSMUST00000063672.10	2804	7	28	9	-12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGTTAGACAAAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	63414200	63349678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63350297_63350901_63351115_63352346_63352384_63353596_63353800_63379518_63379645_63390886_63391106_63412849
ENSMUSG00000039145.17_0	chr2	-	6959	11	FSM	ENSMUSG00000039145.17	ENSMUST00000044009.14	6962	11	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGTTGTCTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	5719324	5298268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_5303913_5306306_5306425_5308101_5308190_5315802_5315882_5317899_5318013_5343992_5344069_5359479_5359607_5366799_5366939_5449880_5449956_5570459_5570592_5718956
ENSMUSG00000039148.6_0	chr19	-	5071	20	FSM	ENSMUSG00000039148.6	ENSMUST00000044207.5	5091	20	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGATTATTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	5438723	5427562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5430164_5430247_5430370_5430465_5430556_5431008_5431145_5431237_5431329_5431693_5431782_5431988_5432100_5432213_5432388_5432742_5432886_5432967_5433102_5433182_5433308_5433647_5433855_5433962_5434106_5434191_5434292_5434397_5434476_5434645_5434752_5434850_5434978_5435490_5435547_5435839_5435898_5438342
ENSMUSG00000039153.18_0	chr17	-	1799	7	FSM	ENSMUSG00000039153.18	ENSMUST00000238400.2	1800	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAAGGATAGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45125113	44807373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_44808131_44950551_44950714_44969405_44969580_45028078_45028184_45035631_45035789_45046119_45046506_45125055
ENSMUSG00000039153.18_1	chr17	-	1725	6	ISM	ENSMUSG00000039153.18	ENSMUST00000238400.2	1800	7	78624	1	32	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAAGGATAGCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45046489	44807373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_44808131_44950551_44950714_44969405_44969580_45028078_45028184_45035631_45035789_45046119
ENSMUSG00000039153.18_2	chr17	-	6463	7	FSM	ENSMUSG00000039153.18	ENSMUST00000113572.9	6463	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGGTTTTGTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45047535	44914887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_44919271_44920914_44920981_44950551_44950714_44969405_44969580_45028078_45028184_45035631_45035789_45046119
ENSMUSG00000039156.20_0	chr5	+	4914	12	FSM	ENSMUSG00000039156.20	ENSMUST00000117661.9	4934	12	16	4	-5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTTGGTGTGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54155856	54278395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUSG00000039156.20_15	chr5	+	4879	13	FSM	ENSMUSG00000039156.20	ENSMUST00000201469.4	4892	13	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATTTGGTGTGGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54155915	54278395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267457_54267482_54267878_54267980_54268213_54268453_54273260_54273535_54275613
ENSMUSG00000039156.20_6	chr5	+	3815	12	FSM	ENSMUSG00000039156.20	ENST00000467011.6	3833	12	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGATTGTGTTGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	54155872	54277271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_54156377_54210717_54210849_54232621_54232737_54259916_54260029_54260914_54261031_54261734_54261913_54262562_54262741_54267044_54267213_54267878_54267980_54268213_54268453_54273260_54273576_54275613
ENSMUSG00000039157.13_0	chr2	+	4208	11	FSM	ENSMUSG00000039157.13	ENSMUST00000048375.6	4223	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTTTGTTGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	32425379	32459762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406
ENSMUSG00000039157.13_2	chr2	+	2866	12	FSM	ENSMUSG00000039157.13	ENST00000373095.6	2883	12	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGTCTGGCAGGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	32425613	32459552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32426245_32448038_32448160_32448329_32448360_32450050_32450168_32453430_32453478_32453613_32453772_32455412_32455518_32455599_32455817_32456280_32456403_32456499_32456570_32457406_32458435_32459332
ENSMUSG00000039159.17_0	chr6	-	4648	7	FSM	ENSMUSG00000039159.17	ENSMUST00000102993.10	4657	7	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGCTGAACTTGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	30304532	30211290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_30215083_30221666_30221796_30241370_30241424_30242536_30242577_30260927_30261003_30262145_30262223_30304050
ENSMUSG00000039163.11_0	chr9	-	1151	4	FSM	ENSMUSG00000039163.11	ENSMUST00000044220.11	1169	4	6	12	6	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAAAACCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	117979239	117893601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_117894417_117904189_117904281_117944407_117944498_117979084
ENSMUSG00000039164.3_0	chr2	+	4629	2	FSM	ENSMUSG00000039164.3	ENSMUST00000048431.3	4650	2	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACACACTCCTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	32340489	32346965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32342962_32344808
ENSMUSG00000039166.17_0	chr10	-	2315	2	FSM	ENSMUSG00000039166.17	ENSMUST00000100012.3	2321	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCTTCTTTTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25076050	25044987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_25047147_25075894
ENSMUSG00000039166.17_1	chr10	-	2078	8	FSM	ENSMUSG00000039166.17	ENSMUST00000041984.14	2092	8	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAACAGAGTGTTCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	25175056	25046027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_25047147_25096508_25096657_25115523_25115637_25143205_25143367_25147402_25147540_25159790_25159940_25165496_25165629_25174937
ENSMUSG00000039166.17_7	chr10	-	310	3	FSM	ENSMUSG00000039166.17	ENST00000474850.2	318	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAGCTGAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	25075944	25046955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_25047147_25073563_25073633_25075894
ENSMUSG00000039166.17_8	chr10	-	253	2	ISM	ENSMUSG00000039166.17	ENST00000474850.2	318	3	2320	7	2320	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAGCTGAATCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	25073625	25046955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_25047147_25073563
ENSMUSG00000039168.16_0	chr15	+	1544	4	FSM	ENSMUSG00000039168.16	ENSMUST00000044524.16	1555	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTCTCTCTTACGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	31224469	31274486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_31224730_31235918_31236016_31272534_31272578_31273342
ENSMUSG00000039176.18_0	chr7	-	7824	23	FSM	ENSMUSG00000039176.18	ENSMUST00000073889.14	7837	23	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTTTGATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	79116099	79095980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115817
ENSMUSG00000039176.18_1	chr7	-	7834	23	NNC	ENSMUSG00000039176.18	novel	7837	23	NA	NA	0	-2	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTTTTGATCATGG	NA	NA	NA	NA	NA	NA	NA	NA	79116110	79095980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_79099786_79100232_79100394_79101289_79101499_79101607_79101777_79101854_79101978_79103452_79103700_79103786_79103923_79104341_79104460_79104558_79104613_79105182_79105344_79105788_79105897_79106182_79106261_79106455_79106577_79107921_79108159_79108921_79109049_79109184_79109334_79109436_79109620_79109805_79109886_79110010_79110158_79110263_79110429_79111445_79111642_79114351_79115120_79115818
ENSMUSG00000039178.10_0	chr5	+	2258	21	FSM	ENSMUSG00000039178.10	ENSMUST00000037337.10	2273	21	7	8	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTATACAGATATCTC	NA	NA	NA	NA	NA	NA	NA	NA	53966975	54061299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032274_54041003_54041037_54044695_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039178.10_11	chr5	+	2212	20	FSM	ENSMUSG00000039178.10	ENST00000264866.9	2228	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGGAAAAGGTATACAGA	NA	NA	NA	NA	NA	NA	NA	NA	53967011	54061293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53967201_53986691_53986765_53987796_53987843_53990311_53990388_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032278_54044670_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039178.10_17	chr5	+	1370	17	FSM	ENSMUSG00000039178.10	ENST00000511789.5	1382	17	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGATCTTCGAGGTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	53967107	54060742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53967201_53992513_53992589_53993937_53994002_53995265_53995313_53995468_53995580_54003542_54003616_54005503_54005543_54007179_54007293_54014189_54014265_54017485_54017549_54029594_54029680_54032228_54032278_54044670_54044806_54046657_54046750_54054332_54054449_54058918_54058990_54060673
ENSMUSG00000039182.7_0	chr13	+	2023	2	FSM	ENSMUSG00000039182.7	ENSMUST00000178289.3	2035	2	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTCTGAGGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14804741	14812779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14804870_14810884
ENSMUSG00000039182.7_1	chr13	+	2897	2	FSM	ENSMUSG00000039182.7	ENSMUST00000038690.6	2914	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGTAAGCCGCTAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	14804843	14813675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14804950_14810884
ENSMUSG00000039183.7_0	chr17	-	1353	6	FSM	ENSMUSG00000039183.7	ENSMUST00000234597.2	1434	6	74	7	-11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25104814	25101592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692
ENSMUSG00000039183.7_1	chr17	-	1419	7	FSM	ENSMUSG00000039183.7	ENSMUST00000044252.7	1427	7	1	7	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATGTGGTCAAGGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	25105321	25101592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25102289_25102779_25102850_25103098_25103210_25103374_25103530_25104392_25104592_25104692_25104812_25105252
ENSMUSG00000039183.7_17	chr17	-	357	3	FSM	ENSMUSG00000039183.7	ENST00000568706.1	374	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCGCTGTGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	25104793	25103108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25103210_25103374_25103530_25104692
ENSMUSG00000039183.7_8	chr17	-	708	5	FSM	ENSMUSG00000039183.7	ENST00000565134.5	721	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGTGTCAGGAGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	25104793	25102781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25102890_25103064_25103210_25103374_25103530_25104392_25104592_25104692
ENSMUSG00000039187.17_0	chr7	+	4633	38	FSM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTGGTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79042064	79100005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79042140_79045640_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ENSMUSG00000039187.17_2	chr7	+	4557	37	ISM	ENSMUSG00000039187.17	ENSMUST00000036865.13	4645	38	3582	7	3582	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTCTGGTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79045641	79100005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_79045744_79048883_79048957_79051572_79051704_79052016_79052174_79052258_79052317_79054890_79054933_79055914_79056039_79057071_79057158_79058887_79059015_79060908_79061002_79062366_79062504_79067583_79067765_79070010_79070099_79073953_79074082_79074641_79074713_79075854_79075970_79076874_79076998_79080177_79080247_79081861_79081964_79082930_79083108_79083180_79083303_79083883_79084049_79084944_79085125_79087981_79088149_79089365_79089443_79090378_79090496_79093488_79093541_79093695_79093824_79093905_79093975_79094148_79094258_79094422_79094611_79095284_79095339_79095417_79095478_79097997_79098061_79098567_79098664_79098820_79098929_79099387
ENSMUSG00000039191.13_24	chr5	+	2067	12	FSM	ENSMUSG00000039191.13	ENST00000505958.6	2081	12	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTACCGTCTTTTTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	53748428	53810960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53748873_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_4	chr5	+	5424	11	FSM	ENSMUSG00000039191.13	ENSMUST00000113865.5	5440	11	9	7	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTGTAGATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53747821	53814697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53748067_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_45	chr5	+	1746	11	FSM	ENSMUSG00000039191.13	ENST00000681093.1	1760	11	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCAAAACTGCCAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	53773699	53811084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039191.13_5	chr5	+	1985	12	FSM	ENSMUSG00000039191.13	ENST00000348160.9	2003	12	10	8	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAACTGCCAGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	53747829	53811085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53748067_53773698_53773880_53784724_53784764_53793303_53793400_53799365_53799532_53803211_53803387_53806712_53806851_53807004_53807118_53808681_53808823_53809948_53810105_53810423_53810528_53810646
ENSMUSG00000039195.5_0	chr2	-	2602	2	FSM	ENSMUSG00000039195.5	ENSMUST00000146423.2	2618	2	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATTTTGATGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	32271858	32267108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32269546_32271693
ENSMUSG00000039195.5_1	chr2	-	666	2	FSM	ENSMUSG00000039195.5	ENSMUST00000048792.5	680	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCCCCCTTCTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	32271941	32269117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32269546_32271703
ENSMUSG00000039197.11_0	chr14	+	1761	11	FSM	ENSMUSG00000039197.11	ENSMUST00000045376.11	1782	11	12	9	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATAGGGATTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21102653	21498628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21102769_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_11	chr14	+	1120	10	FSM	ENSMUSG00000039197.11	ENST00000673027.1	1134	10	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGCAGTGACCACATCC	NA	NA	NA	NA	NA	NA	NA	NA	21126270	21498037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21126390_21142434_21142510_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039197.11_21	chr14	+	1594	9	FSM	ENSMUSG00000039197.11	ENST00000673352.1	1601	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGATTTTATTGATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	21142442	21498699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21473570_21473658_21497881
ENSMUSG00000039197.11_8	chr14	+	1799	11	FSM	ENSMUSG00000039197.11	ENSMUST00000224069.2	1818	11	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGCCATATAGGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	21126229	21498621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_21126390_21142434_21142510_21153887_21153942_21219867_21219947_21284900_21285074_21290530_21290640_21368080_21368252_21419138_21419175_21431570_21431686_21473570_21473658_21497881
ENSMUSG00000039199.7_0	chr8	-	2054	14	FSM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTGCGGACTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	106223502	106199056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422_106214499_106223441
ENSMUSG00000039199.7_2	chr8	-	1988	13	ISM	ENSMUSG00000039199.7	ENSMUST00000212303.2	2056	14	9009	2	-3511	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTTTTGCGGACTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	106214493	106199056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_106199514_106199622_106199702_106199837_106199932_106200115_106200199_106202655_106202769_106203002_106203162_106203245_106203371_106203648_106203751_106205383_106205560_106210172_106210416_106210820_106211060_106212093_106212141_106214422
ENSMUSG00000039201.11_0	chrX	-	2641	6	FSM	ENSMUSG00000039201.11	ENSMUST00000239441.2	2648	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTATTTCTCTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	8042413	8020710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_8022306_8022554_8022744_8022889_8023018_8038976_8039132_8040439_8040550_8041949
ENSMUSG00000039202.13_0	chr7	+	6848	11	FSM	ENSMUSG00000039202.13	ENSMUST00000037315.13	6877	11	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGACAAAAAAATGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78922956	79015237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78923088_78944255_78944356_78946755_78946956_78973216_78973393_78975181_78975350_78998007_78998192_79000498_79000592_79003737_79003849_79005549_79005620_79007812_79007898_79009707
ENSMUSG00000039205.17_0	chr2	+	2854	17	FSM	ENSMUSG00000039205.17	ENSMUST00000113334.8	2871	17	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32242355	32268309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32242540_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039205.17_10	chr2	+	2586	15	FSM	ENSMUSG00000039205.17	ENSMUST00000113331.8	2604	15	13	5	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	32253829	32268310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32253992_32254230_32254347_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039205.17_3	chr2	+	2761	17	FSM	ENSMUSG00000039205.17	ENSMUST00000048964.14	2771	17	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCCCCACCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	32253219	32268309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32253311_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260043_32260138_32260253_32260357_32260875_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039205.17_4	chr2	+	2958	18	FSM	ENSMUSG00000039205.17	ENSMUST00000113332.8	2973	18	10	5	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGTCCCCACCAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	32253219	32268310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32253669_32253816_32253992_32254230_32254347_32255814_32255887_32257314_32257545_32260058_32260138_32260253_32260357_32260875_32261114_32261260_32261421_32261647_32261770_32262309_32262508_32264353_32264479_32265496_32265585_32266020_32266135_32266277_32266440_32267304_32267375_32267520_32267643_32267975
ENSMUSG00000039206.14_0	chr5	+	4635	15	FSM	ENSMUSG00000039206.14	ENSMUST00000045593.12	4651	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTACCAAAAAAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	143450347	143491690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143450532_143452707_143452860_143458701_143458874_143460367_143460627_143464168_143464292_143467384_143467513_143469980_143470108_143472902_143472987_143475681_143475760_143479912_143479994_143480296_143480425_143486724_143486794_143486879_143486953_143488616_143488865_143488961
ENSMUSG00000039206.14_9	chr5	+	4127	6	NNC	ENSMUSG00000039206.14	novel	4651	15	NA	NA	39033	22045	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGCAGAGAAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	143489371	143513742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_143492859_143493079_143493242_143493850_143493913_143500422_143500542_143502912_143502985_143513517
ENSMUSG00000039208.16_0	chr11	+	1381	4	FSM	ENSMUSG00000039208.16	ENSMUST00000036742.14	1401	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATAGTGTTTTTACAA	NA	NA	NA	NA	NA	NA	NA	NA	121593250	121607126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121593622_121598555_121598942_121605522_121605583_121606562
ENSMUSG00000039210.17_0	chr1	+	4540	10	FSM	ENSMUSG00000039210.17	ENSMUST00000065573.14	4547	10	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AACCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	186947710	187083620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187048720_187048761_187054480_187054552_187073683_187073773_187080553
ENSMUSG00000039210.17_3	chr1	+	4689	8	FSM	ENSMUSG00000039210.17	ENSMUST00000110943.9	4702	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGCCGTTGTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	186947725	187083895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_187036526_187036595_187073683_187073773_187080553
ENSMUSG00000039210.17_4	chr1	+	1635	6	FSM	ENSMUSG00000039210.17	ENSMUST00000044812.12	1639	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCCATTTATGGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	186947740	186966610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_186947874_186957699_186958417_186962980_186963043_186965327_186965511_186965943_186966024_186966150
ENSMUSG00000039217.14_0	chr9	+	838	6	FSM	ENSMUSG00000039217.14	ENSMUST00000214117.2	860	6	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCGCATGTGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	50476689	50493131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_50476827_50486567_50486649_50487993_50488006_50489060_50489193_50490586_50490721_50492789
ENSMUSG00000039217.14_1	chr9	+	829	5	NIC	ENSMUSG00000039217.14	novel	860	6	NA	NA	13	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCGCATGTGTCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	50476686	50493131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_50476827_50486567_50486649_50489060_50489193_50490586_50490721_50492789
ENSMUSG00000039218.18_0	chr17	+	8846	15	FSM	ENSMUSG00000039218.18	ENSMUST00000190686.7	8864	15	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGCAGTAATTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24022170	24043702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24022373_24025905_24026177_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039218.18_4	chr17	+	8540	14	FSM	ENSMUSG00000039218.18	ENSMUST00000088621.11	8564	14	13	11	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAGTAATTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	24022207	24043704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24022373_24027039_24027148_24027327_24027493_24028942_24029021_24029386_24029450_24029712_24029746_24030004_24030056_24030612_24030706_24031401_24031595_24034095_24040665_24041386_24041675_24042764_24042879_24042989_24043095_24043189
ENSMUSG00000039219.19_0	chr13	+	5776	23	FSM	ENSMUSG00000039219.19	ENSMUST00000110536.8	5783	23	0	7	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGATTTTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	14238369	14373945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14238786_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUSG00000039219.19_1	chr13	+	5854	24	FSM	ENSMUSG00000039219.19	ENSMUST00000110534.8	5864	24	8	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTGATTTTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	14238384	14373945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14344503_14344765_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUSG00000039219.19_12	chr13	+	3003	15	FSM	ENSMUSG00000039219.19	ENSMUST00000110533.2	3020	15	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATACAAAAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14238393	14340260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693
ENSMUSG00000039219.19_3	chr13	+	5831	23	FSM	ENSMUSG00000039219.19	ENSMUST00000039538.15	5844	23	7	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATTCAAAAAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14238383	14374182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14238618_14239409_14239465_14294725_14294837_14301035_14301102_14303759_14303851_14307020_14307101_14310752_14310845_14317564_14317704_14319871_14319952_14328000_14328078_14329565_14329721_14332358_14332432_14334762_14334858_14335882_14335981_14338693_14338935_14339351_14339528_14355804_14355890_14358891_14359091_14361401_14362617_14365727_14365842_14367950_14368167_14369914_14370062_14372190
ENSMUSG00000039220.17_10	chr17	+	4189	19	FSM	ENSMUSG00000039220.17	ENSMUST00000087210.7	4222	19	14	19	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGAAGCAGCTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	36228101	36243154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ENSMUSG00000039220.17_3	chr17	+	4218	20	FSM	ENSMUSG00000039220.17	ENST00000376511.7	4229	20	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAAGAGAAGCAGCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36227877	36243151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36227898_36228089_36228609_36234199_36234318_36234928_36235016_36235136_36235273_36235749_36235802_36237093_36237172_36237291_36237466_36237663_36237770_36237865_36237979_36238801_36238903_36239073_36239222_36239294_36239454_36239543_36239791_36240112_36240177_36240283_36240479_36240664_36240741_36240942_36241057_36241183_36241784_36242040
ENSMUSG00000039221.11_0	chr3	+	538	4	FSM	ENSMUSG00000039221.11	ENSMUST00000043867.11	552	4	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTATAAAAACATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	28859593	28861559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_28859693_28860648_28860742_28860885_28861008_28861335
ENSMUSG00000039221.11_14	chr3	+	441	3	ISM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	1033	10	1033	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAACATGTATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	28860650	28861563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_28860742_28860885_28861008_28861335
ENSMUSG00000039221.11_4	chr3	+	512	4	FSM	ENSMUSG00000039221.11	ENSMUST00000194649.2	525	4	4	9	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACATGTATGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	28859621	28861564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_28859693_28860651_28860742_28860885_28861008_28861335
ENSMUSG00000039230.15_0	chr11	+	3889	39	FSM	ENSMUSG00000039230.15	ENSMUST00000103013.10	3906	39	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACAGCCCAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	121342783	121507982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121343055_121344456_121344508_121350226_121350325_121351234_121351337_121352079_121352227_121352577_121352634_121366364_121366498_121383383_121383430_121384584_121384718_121387820_121387964_121389861_121389923_121390861_121390937_121394518_121394614_121431677_121431835_121441049_121441108_121447781_121447812_121451500_121451587_121464621_121464703_121466111_121466186_121466951_121467070_121469540_121469602_121470973_121470997_121473578_121473611_121481169_121481233_121482004_121482082_121483456_121483539_121485085_121485205_121487274_121487367_121488077_121488219_121492782_121492867_121493813_121493973_121494059_121494199_121494440_121494563_121496088_121496167_121499397_121499488_121500165_121500254_121500806_121500917_121502489_121502575_121507753
ENSMUSG00000039231.19_0	chrX	-	3109	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115638.10	3116	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCAAGCTGGGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	7940992	7927409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940782
ENSMUSG00000039231.19_2	chrX	-	2764	6	FSM	ENSMUSG00000039231.19	ENSMUST00000115637.8	2778	6	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAATAAGCTTGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	7940488	7927678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7929223_7929934_7930065_7930149_7930297_7936826_7937490_7938561_7938708_7940354
ENSMUSG00000039232.13_0	chr10	-	4160	3	FSM	ENSMUSG00000039232.13	ENSMUST00000042861.7	4173	3	12	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTGTGAGTTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	12839994	12813953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_12817728_12819895_12820031_12839743
ENSMUSG00000039232.13_1	chr10	-	4020	2	FSM	ENSMUSG00000039232.13	ENSMUST00000163425.9	4032	2	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGAGTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	12839991	12813955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_12817728_12839743
ENSMUSG00000039233.13_0	chr13	-	1832	17	FSM	ENSMUSG00000039233.13	ENSMUST00000039894.13	1844	17	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTATTGATTTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	14214217	14172542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14172767_14172947_14173040_14174642_14174703_14175694_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860_14203992_14214122
ENSMUSG00000039233.13_5	chr13	-	1235	12	FSM	ENSMUSG00000039233.13	ENST00000647428.1	1254	12	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAACAGTCCAACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	14189457	14172680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14172767_14172947_14173040_14175645_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319
ENSMUSG00000039233.13_6	chr13	-	1578	15	FSM	ENSMUSG00000039233.13	ENST00000646624.1	1599	15	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTAACAGTCCAACCGTA	NA	NA	NA	NA	NA	NA	NA	NA	14203981	14172680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_14172767_14172947_14173040_14175645_14175764_14178127_14178282_14179727_14179869_14180372_14180438_14180527_14180593_14181026_14181123_14183199_14183277_14184213_14184317_14185126_14185227_14189319_14189409_14194286_14194473_14202282_14202368_14203860
ENSMUSG00000039234.12_0	chr3	+	3895	23	FSM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123061105	123159284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_123061186_123063242_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039234.12_7	chr3	+	3816	22	ISM	ENSMUSG00000039234.12	ENSMUST00000047923.12	3903	23	2138	6	2103	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGGCTTACTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	123063241	123159284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_123063403_123072793_123072918_123084064_123084214_123087226_123087503_123087807_123087942_123093205_123093318_123099441_123099570_123121156_123121296_123123972_123124089_123130134_123130260_123136689_123136882_123137472_123137567_123143557_123143675_123144348_123144520_123147038_123147136_123147224_123147371_123148595_123148735_123149371_123149491_123152485_123152666_123154468_123154661_123156282_123156373_123158469
ENSMUSG00000039236.19_0	chr7	+	1067	4	FSM	ENSMUSG00000039236.19	ENSMUST00000038142.15	1083	4	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCCCACCACCAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	78563526	78570142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_78563791_78564069_78564323_78566280_78566482_78569793
ENSMUSG00000039238.7_0	chr11	-	1242	3	FSM	ENSMUSG00000039238.7	ENST00000572562.1	1252	3	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGCCTCAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	121410136	121402641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121403326_121403452_121403930_121410055
ENSMUSG00000039238.7_1	chr11	-	1159	2	ISM	ENSMUSG00000039238.7	ENST00000572562.1	1252	3	6214	5	6214	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTGAGGCCTCAAGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	121403927	121402641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_121403326_121403452
ENSMUSG00000039239.15_0	chr1	-	5101	7	FSM	ENSMUSG00000039239.15	ENSMUST00000045288.14	5116	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAGTAACATGTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	186438178	186354995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_186357804_186361079_186361234_186362806_186362985_186364654_186364766_186364874_186365008_186381931_186382096_186436625
ENSMUSG00000039242.11_0	chr13	+	3867	12	FSM	ENSMUSG00000039242.11	ENSMUST00000099747.5	3892	12	17	8	17	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAACTAGCCTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	14129070	14173651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477
ENSMUSG00000039242.11_3	chr13	+	2407	13	FSM	ENSMUSG00000039242.11	ENSMUST00000221974.2	2439	13	27	5	-22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCAACAGCTGTAGTACC	NA	NA	NA	NA	NA	NA	NA	NA	14129236	14173683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171638_14172963
ENSMUSG00000039242.11_4	chr13	+	2391	13	FSM	ENSMUSG00000039242.11	ENSMUST00000221300.2	2397	13	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACTCACTTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	14129264	14173671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14129505_14140894_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165453_14165953_14166138_14168999_14169126_14169700_14169861_14170311_14170369_14171477_14171638_14172939
ENSMUSG00000039242.11_5	chr13	+	1069	9	FSM	ENSMUSG00000039242.11	ENST00000404344.2	1087	9	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGACCTATCAGGTAACAA	NA	NA	NA	NA	NA	NA	NA	NA	14140912	14169847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_14141043_14145351_14145453_14150022_14150220_14155185_14155282_14161937_14162049_14165373_14165429_14166031_14166138_14168999_14169126_14169700
ENSMUSG00000039244.11_0	chr5	-	2186	6	FSM	ENSMUSG00000039244.11	ENSMUST00000046418.3	2208	6	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTCATAGGCATTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	143301101	143286969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143287759_143292520_143292561_143293370_143293896_143297465_143297632_143299932_143300155_143300657
ENSMUSG00000039246.9_0	chr1	-	1566	5	FSM	ENSMUSG00000039246.9	ENSMUST00000045388.8	1578	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAAAATAAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	185849502	185819934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_185820966_185821640_185821757_185832389_185832560_185846460_185846561_185849353
ENSMUSG00000039253.8_0	chr11	+	2500	6	FSM	ENSMUSG00000039253.8	ENSMUST00000038096.8	2520	6	15	5	15	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGCCTAAGACTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	121312241	121322109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121312430_121315751_121315904_121316380_121316473_121317446_121317530_121319870_121319994_121320247
ENSMUSG00000039254.17_0	chr2	+	2900	20	FSM	ENSMUSG00000039254.17	ENSMUST00000036473.16	2918	20	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTAATGTTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	32126609	32145007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32126754_32127371_32127524_32130438_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_10	chr2	+	2093	18	FSM	ENSMUSG00000039254.17	ENST00000423007.6	2110	18	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCGAAAGTAATAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	32130447	32144444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32130546_32130685_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133795_32134245_32134402_32135558_32135690_32136026_32136123_32137548_32137642_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039254.17_6	chr2	+	1853	16	FSM	ENSMUSG00000039254.17	ENST00000677626.1	1877	16	10	14	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAGAGAACAAGAACACAG	NA	NA	NA	NA	NA	NA	NA	NA	32130447	32144454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32130546_32130676_32130728_32131664_32131812_32132904_32133017_32133476_32133543_32133630_32133725_32134245_32134402_32135558_32135690_32138626_32138724_32140481_32140575_32140800_32140922_32141273_32141372_32141921_32142036_32142887_32143015_32143727_32143906_32144284
ENSMUSG00000039262.17_11	chr2	+	10654	32	FSM	ENSMUSG00000039262.17	ENSMUST00000069817.15	10671	32	1	16	1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAATAAAGCCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	32041160	32124518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32102898_32104960_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109228_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32119274_32119357_32120622
ENSMUSG00000039262.17_2	chr2	+	8597	30	FSM	ENSMUSG00000039262.17	ENSMUST00000036691.14	8612	30	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTGTGTCGGTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	32041107	32124548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32041304_32072469_32072639_32073134_32073313_32075356_32075460_32077492_32077566_32081520_32081665_32083774_32084017_32084391_32084514_32084868_32085009_32089012_32089104_32090837_32091031_32094020_32094337_32096347_32096593_32098651_32098848_32102086_32102304_32106057_32106246_32106623_32106770_32107208_32107348_32108688_32108772_32109225_32109418_32109551_32109750_32110101_32110189_32111091_32111197_32111356_32111550_32112301_32112400_32113430_32113559_32113940_32114182_32116242_32116399_32116956_32117049_32120622
ENSMUSG00000039263.17_1	chr2	+	2451	12	FSM	ENSMUSG00000039263.17	ENSMUST00000044415.16	2467	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGAAACTACCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	173952151	173964857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173952366_173952869_173953056_173953406_173953578_173955689_173955780_173956189_173956272_173957843_173957987_173961185_173961264_173962019_173962121_173962336_173962461_173962740_173962918_173963271_173963383_173963883
ENSMUSG00000039270.10_0	chr4	-	7906	6	FSM	ENSMUSG00000039270.10	ENSMUST00000107359.9	7924	6	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATAATCAGTTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	70453158	70345312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_70351769_70353453_70353724_70366899_70367044_70374097_70374238_70406367_70406570_70452464
ENSMUSG00000039275.10_0	chr11	+	5011	9	FSM	ENSMUSG00000039275.10	ENSMUST00000106113.2	5029	9	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAATTTTAATGAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	121150822	121200711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121151349_121176247_121176443_121178756_121178905_121181569_121181717_121186854_121187049_121187739_121187916_121189384_121189682_121190409_121190620_121197593
ENSMUSG00000039285.13_0	chr9	+	3374	8	FSM	ENSMUSG00000039285.13	ENSMUST00000044454.12	3396	8	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTAACAGCTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	117869580	117892899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124_117888244_117890781
ENSMUSG00000039285.13_13	chr9	+	2493	7	FSM	ENSMUSG00000039285.13	ENSMUST00000134433.8	2499	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTGTGTTCTTTTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	117869652	117889552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_117870027_117876480_117876702_117878377_117878504_117878964_117879065_117880421_117880571_117884883_117884979_117888124
ENSMUSG00000039286.13_0	chr3	-	7015	26	FSM	ENSMUSG00000039286.13	ENST00000415807.7	7024	26	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTTAAATACTTAACATC	NA	NA	NA	NA	NA	NA	NA	NA	27765450	27470261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697235_27765261
ENSMUSG00000039286.13_14	chr3	-	6850	26	ISM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	27592	0	27592	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	27736955	27470310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886
ENSMUSG00000039286.13_15	chr3	-	6886	27	FSM	ENSMUSG00000039286.13	ENSMUST00000195008.6	6886	27	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTAGGGTTCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	27764547	27470310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_27473752_27480182_27480311_27483012_27483180_27494106_27494320_27505462_27505744_27510597_27510748_27511135_27511250_27512865_27513039_27514093_27514200_27515824_27515944_27517923_27517996_27519850_27519990_27521523_27521611_27523014_27523190_27524370_27524496_27542385_27542440_27545173_27545313_27552925_27552986_27555542_27555695_27562629_27562689_27592097_27592389_27596079_27596324_27610268_27610346_27674753_27674830_27697099_27697239_27736886_27736964_27764519
ENSMUSG00000039294.15_0	chr11	-	2399	7	FSM	ENSMUSG00000039294.15	ENSMUST00000038709.14	2417	7	8	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCAAATGTGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	121120127	121113423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121118068_121118111_121119153_121119297_121119864
ENSMUSG00000039294.15_12	chr11	-	516	5	FSM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTGGACTGGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	121119233	121114938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594_121117669_121119153
ENSMUSG00000039294.15_13	chr11	-	437	4	ISM	ENSMUSG00000039294.15	ENST00000434650.6	525	5	1569	4	1569	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTGGACTGGCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	121117669	121114938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_121115059_121115374_121115520_121116629_121116727_121117594
ENSMUSG00000039298.17_0	chr4	-	11824	37	FSM	ENSMUSG00000039298.17	ENSMUST00000144099.8	11847	37	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAAAACAAGTCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	70328666	70135101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_70141352_70141766_70141814_70146834_70146962_70153583_70153728_70156416_70156683_70157521_70157600_70160707_70160833_70161632_70161823_70163617_70163735_70168589_70168710_70172872_70173052_70175571_70175621_70182727_70182961_70184711_70185286_70190880_70191013_70194710_70194946_70199326_70199760_70208081_70208267_70210068_70210165_70217056_70217186_70218802_70218913_70220320_70220452_70225431_70225527_70233560_70233702_70235663_70235835_70255577_70255797_70267380_70267483_70270905_70271026_70271846_70271889_70272949_70273113_70279047_70279203_70282243_70282368_70295029_70295107_70298427_70298539_70319481_70319550_70321710_70321779_70328448
ENSMUSG00000039304.12_0	chr3	+	4970	5	FSM	ENSMUSG00000039304.12	ENSMUST00000046383.12	4993	5	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAACATCAAGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	27371183	27393798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_27371440_27380081_27380220_27383201_27383245_27388212_27388318_27389370
ENSMUSG00000039307.17_0	chr11	+	2360	13	NIC	ENSMUSG00000039307.17	novel	2149	13	NA	NA	7	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCCACCAGCAGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	121095267	121113472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111689_121111988_121112061_121112164_121112326_121112417_121113038
ENSMUSG00000039307.17_1	chr11	+	2129	13	FSM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGGAAGTCCCACCAGC	NA	NA	NA	NA	NA	NA	NA	NA	121095271	121113464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_121095669_121098464_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ENSMUSG00000039307.17_3	chr11	+	1507	12	ISM	ENSMUSG00000039307.17	ENSMUST00000106117.8	2149	13	3210	228	9	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTGGGGCCCTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	121098470	121113245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_121098602_121102867_121102978_121104808_121104897_121105585_121105751_121107718_121107903_121108913_121108986_121109368_121109565_121110666_121110750_121111908_121111988_121112061_121112164_121112326_121112417_121113038
ENSMUSG00000039308.7_0	chr14	-	3890	15	FSM	ENSMUSG00000039308.7	ENSMUST00000223679.2	3907	15	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTCTGCTTCATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20784613	20773797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20774429_20774528_20774632_20774778_20774889_20774975_20775147_20775346_20775522_20775641_20775766_20777061_20777159_20777245_20777429_20777554_20777684_20778143_20778330_20778518_20778674_20778943_20779032_20779233_20780546_20783617_20783713_20784282
ENSMUSG00000039316.15_0	chr17	-	4006	10	FSM	ENSMUSG00000039316.15	ENSMUST00000044503.14	4029	10	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCATAATATATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	50497685	50299290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_50301510_50309659_50309742_50311281_50311386_50343968_50344085_50354324_50354529_50362264_50362656_50393595_50393705_50414097_50414285_50476030_50476188_50497248
ENSMUSG00000039318.13_0	chr1	+	4412	35	FSM	ENSMUSG00000039318.13	ENSMUST00000194740.6	4418	35	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGCAGATGCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	184936319	185016382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999212_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUSG00000039318.13_3	chr1	+	7023	35	FSM	ENSMUSG00000039318.13	ENSMUST00000069652.8	7052	35	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCATATTCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	184936332	185018946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_184936551_184954041_184954107_184965157_184965282_184966317_184966400_184967500_184967549_184967627_184967704_184968156_184968259_184970975_184971076_184972858_184972958_184978832_184978982_184980040_184980121_184980209_184980300_184982076_184982217_184983129_184983347_184983860_184984005_184984227_184984311_184984512_184984578_184987941_184988033_184990694_184990823_184991510_184991725_184992597_184992696_184993526_184993633_184994875_184995037_184995827_184996057_184999097_184999272_184999369_184999477_185003630_185003698_185004768_185004840_185008108_185008145_185009343_185009419_185010344_185010564_185013847_185013938_185014494_185014708_185015578_185015738_185016043
ENSMUSG00000039323.19_0	chr1	+	1277	4	FSM	ENSMUSG00000039323.19	ENSMUST00000047328.11	1307	4	10	20	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	11196	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGAAGGAAAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72863671	72891613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72864124_72888244_72888472_72888722_72888864_72891156
ENSMUSG00000039328.12_0	chr8	+	3548	6	FSM	ENSMUSG00000039328.12	ENSMUST00000046941.8	3582	6	12	22	2	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATAAAACTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31601859	31621488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31602201_31608458_31608616_31614879_31614926_31615193_31615236_31618282_31618363_31618606
ENSMUSG00000039342.6_2	chr1	-	4315	22	FSM	ENSMUSG00000039342.6	ENST00000520309.5	4324	22	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTTTTGAACAAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	72738203	72682232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_72682471_72684082_72684130_72686152_72686350_72689280_72689391_72690090_72690209_72690854_72691014_72691497_72691621_72695265_72695373_72697569_72697732_72697808_72697963_72698136_72698379_72704246_72704416_72705503_72705746_72709250_72709356_72713129_72713339_72714827_72715030_72719139_72719360_72720968_72721150_72726883_72726988_72727708_72727873_72729104_72729543_72737579
ENSMUSG00000039345.17_0	chr16	+	1820	11	FSM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCAAGTCGTCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	8288656	8308548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_8288730_8291694_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUSG00000039345.17_2	chr16	+	1748	10	ISM	ENSMUSG00000039345.17	ENSMUST00000046470.16	1825	11	3042	0	3042	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCAAGTCGTCTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	8291693	8308548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_8291831_8295830_8296194_8299990_8300032_8300119_8300265_8302125_8302198_8302683_8302738_8303728_8303810_8305222_8305326_8306522_8306692_8307965
ENSMUSG00000039347.8_0	chr6	+	1766	4	FSM	ENSMUSG00000039347.8	ENSMUST00000040361.8	1789	4	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAGCCAAATGTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	48514560	48518724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48514789_48516157_48516206_48516973_48517101_48517361
ENSMUSG00000039354.17_0	chr1	+	3051	17	FSM	ENSMUSG00000039354.17	ENSMUST00000047615.15	3059	17	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72622413	72672289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72622598_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUSG00000039354.17_7	chr1	+	2973	17	FSM	ENSMUSG00000039354.17	ENSMUST00000152225.2	2994	17	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTGTATTCCGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72622790	72672289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72622897_72624796_72625564_72626209_72626261_72630221_72630435_72630983_72631035_72634946_72635134_72636537_72636689_72637929_72638089_72640527_72640594_72650453_72650595_72651967_72652184_72655666_72655738_72659190_72659294_72665621_72665805_72667259_72667361_72668533_72668631_72671979
ENSMUSG00000039356.16_0	chr2	+	1674	9	FSM	ENSMUSG00000039356.16	ENSMUST00000038474.14	1686	9	7	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGTTGGAGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	31560733	31571356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568462_31568640_31569862_31569992_31570501
ENSMUSG00000039356.16_2	chr2	+	856	9	FSM	ENSMUSG00000039356.16	ENST00000372352.7	872	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGCCGAGAGCTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	31560749	31570578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31560874_31562483_31562586_31564526_31564573_31564706_31564797_31565850_31565917_31566679_31566749_31568486_31568640_31569862_31569992_31570501
ENSMUSG00000039357.3_0	chr14	+	4148	3	FSM	ENSMUSG00000039357.3	ENSMUST00000048016.3	4163	3	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTTTCTTTATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	20745049	20751083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20745767_20745855_20746482_20748278
ENSMUSG00000039361.12_0	chr7	+	3456	19	FSM	ENSMUSG00000039361.12	ENSMUST00000207225.2	3489	19	25	8	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATGTTACGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89779445	89858132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_1	chr7	+	8190	21	FSM	ENSMUSG00000039361.12	ENSMUST00000207484.2	8209	21	14	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAGGAGAGAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89779436	89862668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_12	chr7	+	2229	19	FSM	ENSMUSG00000039361.12	ENST00000630913.2	2246	19	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTAAGATCTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89779639	89857010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_19	chr7	+	3340	20	FSM	ENSMUSG00000039361.12	ENSMUST00000208742.2	3361	20	15	6	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATGTTACGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89779726	89858132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_22	chr7	+	3503	21	FSM	ENSMUSG00000039361.12	ENSMUST00000049537.9	3528	21	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTATACAAAAAGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	89779744	89858304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831426_89831577_89838357_89838466_89840363_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_4	chr7	+	3502	20	FSM	ENSMUSG00000039361.12	ENSMUST00000209068.2	3511	20	1	8	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATGTTACGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89779438	89858132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89843480_89843505_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039361.12_5	chr7	+	3577	20	FSM	ENSMUSG00000039361.12	ENST00000526033.5	3592	20	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAACATGTTACGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	89779468	89858132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89779911_89809655_89809799_89810467_89810544_89814721_89814825_89818389_89818484_89819786_89819899_89821441_89821549_89822241_89822284_89823655_89823742_89825486_89825611_89825866_89826004_89826707_89826812_89831447_89831577_89838357_89838466_89840348_89840481_89840566_89840598_89840861_89840962_89844862_89844923_89846123_89846229_89856790
ENSMUSG00000039367.12_0	chr14	+	4450	23	FSM	ENSMUSG00000039367.12	ENSMUST00000048657.10	4461	23	3	8	3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTATCCCTCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	20724378	20744912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_10	chr14	+	4190	24	FSM	ENSMUSG00000039367.12	ENSMUST00000223751.2	4196	24	0	6	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTATCCCTCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	20724410	20744912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20724457_20726025_20726226_20729595_20729732_20732746_20732844_20733376_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_12	chr14	+	4423	23	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	1447	15	1446	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAAATAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	20725856	20744892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_17	chr14	+	4370	22	ISM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	1618	-5	1617	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGTATCCCTCTCATTA	NA	NA	NA	NA	NA	NA	NA	NA	20726027	20744912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_18	chr14	+	4133	23	ISM	ENSMUSG00000039367.12	ENSMUST00000223751.2	4196	24	1622	10	1622	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTAACCAGTATCCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	20726032	20744908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20726226_20729595_20729732_20732746_20732844_20733376_20733531_20733952_20734090_20735279_20735349_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039367.12_3	chr14	+	4487	24	FSM	ENSMUSG00000039367.12	ENST00000339365.2	4502	24	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAATAAAATAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	20724409	20744892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20724464_20725846_20725928_20726025_20726226_20729595_20729732_20732746_20732920_20733155_20733531_20733952_20734090_20736576_20736689_20736922_20737051_20738453_20738593_20738798_20738915_20739066_20739192_20739339_20739532_20739701_20739796_20739971_20740089_20740771_20740943_20741333_20741431_20741505_20741652_20741768_20741908_20742054_20742174_20742413_20742594_20742787_20742980_20743211_20743302_20743718
ENSMUSG00000039375.17_0	chr8	-	4123	28	ISM	ENSMUSG00000039375.17	ENSMUST00000175915.8	4619	29	28113	273	8	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGATATGGATATCGACA	NA	NA	NA	NA	NA	NA	NA	NA	55149426	55082554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_55082946_55085347_55085532_55088479_55088579_55091321_55091424_55092435_55092539_55092870_55093013_55096148_55096261_55101254_55101395_55102167_55102268_55104321_55104414_55106913_55107047_55110229_55110295_55112618_55112775_55113806_55113933_55114250_55114382_55114467_55114618_55115883_55116087_55118000_55118166_55121383_55121471_55123335_55123419_55125519_55125612_55126564_55126734_55134380_55134566_55138430_55138554_55140560_55140813_55143038_55143270_55146091_55146276_55149303
ENSMUSG00000039375.17_19	chr8	-	3904	29	FSM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACTGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55156948	55082832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_55082946_55085347_55085532_55088479_55088579_55091321_55091424_55092435_55092539_55092870_55093013_55096148_55096285_55101254_55101395_55102167_55102268_55104321_55104414_55106913_55107047_55110229_55110295_55112618_55112775_55113806_55113933_55114250_55114382_55114467_55114618_55115883_55116087_55118000_55118166_55121383_55121471_55123335_55123419_55125519_55125612_55126564_55126734_55134380_55134566_55138430_55138554_55140560_55140762_55143038_55143270_55146091_55146276_55149303_55149433_55156868
ENSMUSG00000039375.17_21	chr8	-	3824	28	ISM	ENSMUSG00000039375.17	ENST00000507824.6	3915	29	7520	7	2	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGACTGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55149432	55082832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_55082946_55085347_55085532_55088479_55088579_55091321_55091424_55092435_55092539_55092870_55093013_55096148_55096285_55101254_55101395_55102167_55102268_55104321_55104414_55106913_55107047_55110229_55110295_55112618_55112775_55113806_55113933_55114250_55114382_55114467_55114618_55115883_55116087_55118000_55118166_55121383_55121471_55123335_55123419_55125519_55125612_55126564_55126734_55134380_55134566_55138430_55138554_55140560_55140762_55143038_55143270_55146091_55146276_55149303
ENSMUSG00000039376.14_0	chr14	-	4378	4	FSM	ENSMUSG00000039376.14	ENSMUST00000057090.12	4394	4	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACACTGTCTGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20718365	20709020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20712534_20715811_20716327_20716715_20716868_20718167
ENSMUSG00000039376.14_1	chr14	-	3675	2	FSM	ENSMUSG00000039376.14	ENSMUST00000119483.2	3696	2	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACACTGTCTGCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	20714626	20709020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20712534_20714464
ENSMUSG00000039377.8_0	chr1	-	2261	4	FSM	ENSMUSG00000039377.8	ENSMUST00000048572.7	2278	4	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGGCCGTTTGGCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	184464806	184459343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_184460189_184462056_184462242_184462887_184463068_184463755
ENSMUSG00000039382.13_1	chrX	+	1589	11	FSM	ENSMUSG00000039382.13	ENSMUST00000043045.10	1609	11	13	7	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAAGGGTGGGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	7588468	7594438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUSG00000039382.13_4	chrX	+	1555	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115689.10	1568	11	10	3	-7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCAAGGGTGGGGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	7588497	7594437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7588618_7590091_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593408_7593511_7593585_7593732_7593988
ENSMUSG00000039382.13_5	chrX	+	1505	11	FSM	ENSMUSG00000039382.13	ENSMUST00000115688.8	1510	11	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCATTTATGACTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	7588492	7594420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_7588618_7590087_7590160_7590262_7590338_7590425_7590531_7592169_7592276_7592436_7592532_7592924_7593005_7593116_7593326_7593450_7593511_7593585_7593732_7593988
ENSMUSG00000039384.9_0	chr1	+	2782	4	FSM	ENSMUSG00000039384.9	ENSMUST00000048655.8	2792	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTTGTACGTGCCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	183766587	183807833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_183766767_183768997_183769850_183801048_183801421_183806454
ENSMUSG00000039391.12_0	chr7	-	1174	9	FSM	ENSMUSG00000039391.12	ENST00000528728.1	1192	9	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAACGCTTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	89537004	89515714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89515855_89518828_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89531499_89531591_89535353_89535478_89536889
ENSMUSG00000039391.12_1	chr7	-	2081	14	FSM	ENSMUSG00000039391.12	ENST00000354755.5	2099	14	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAACGCTTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	89552856	89515714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89515855_89518828_89518955_89524882_89525104_89525296_89525376_89526611_89526785_89529335_89529441_89530821_89530969_89531499_89531591_89535353_89535478_89536889_89537012_89539599_89539680_89545917_89546062_89547245_89547308_89552389
ENSMUSG00000039395.9_0	chr1	-	2266	5	FSM	ENSMUSG00000039395.9	ENSMUST00000048860.9	2284	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCTAGAATGTTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	72251459	72198611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_72200179_72201480_72201645_72203230_72203322_72231201_72231362_72251175
ENSMUSG00000039396.12_0	chr8	-	2236	10	FSM	ENSMUSG00000039396.12	ENSMUST00000047768.11	2253	10	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATGTTTTTGGTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	54092091	54039909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_54040363_54041959_54042135_54052133_54052555_54053985_54054156_54058667_54058835_54060362_54060438_54061749_54061964_54062438_54062574_54076652_54076778_54091790
ENSMUSG00000039405.8_0	chr7	-	3212	2	FSM	ENSMUSG00000039405.8	ENSMUST00000041761.7	3228	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAGCATTCTCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	89166784	89156996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89160079_89166654
ENSMUSG00000039405.8_3	chr7	-	1922	2	FSM	ENSMUSG00000039405.8	ENSMUST00000207932.2	1937	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTGCTGTTCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	89176386	89158316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89160079_89176226
ENSMUSG00000039414.11_0	chr17	-	6322	36	FSM	ENSMUSG00000039414.11	ENST00000233099.6	6336	36	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTTTGAAGTTGATACA	NA	NA	NA	NA	NA	NA	NA	NA	79141667	79058111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_79058203_79060459_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524
ENSMUSG00000039414.11_31	chr17	-	6350	35	ISM	ENSMUSG00000039414.11	ENSMUST00000097281.4	6388	36	1091	9	12	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACAGAGCATTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	79141662	79060335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_79060766_79062639_79062854_79064291_79064444_79067844_79068070_79069428_79069696_79070361_79070507_79072756_79072885_79074308_79074564_79075794_79076033_79080966_79081147_79095633_79095703_79098863_79099046_79102523_79102776_79103250_79103491_79103812_79103958_79109041_79109212_79110800_79110991_79113375_79113536_79115758_79115950_79117936_79118043_79120523_79120700_79121500_79121665_79122918_79123029_79123660_79123761_79124901_79125055_79126234_79126347_79128049_79128301_79128843_79129000_79131924_79132175_79133660_79133819_79135360_79135533_79136921_79137072_79137987_79138097_79138802_79139015_79141524
ENSMUSG00000039427.15_0	chr16	+	1357	12	FSM	ENSMUSG00000039427.15	ENST00000684190.1	1368	12	11	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCGCTCACTCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5051494	5062418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUSG00000039427.15_12	chr16	+	1736	13	FSM	ENSMUSG00000039427.15	ENSMUST00000100196.9	1755	13	13	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTACAATGGAAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5051497	5062761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060468_5061551_5061628_5062304
ENSMUSG00000039427.15_32	chr16	+	490	6	FSM	ENSMUSG00000039427.15	ENST00000515248.1	499	6	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTACTGGGTCTACTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	5057797	5061625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5057892_5058007_5058047_5058322_5058383_5059149_5059261_5060352_5060465_5061551
ENSMUSG00000039427.15_44	chr16	+	335	4	FSM	ENSMUSG00000039427.15	ENST00000533887.1	337	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTACTGGGTCTACTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	5058344	5061625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5058383_5059149_5059261_5060352_5060465_5061551
ENSMUSG00000039427.15_48	chr16	+	288	3	ISM	ENSMUSG00000039427.15	ENST00000533887.1	337	4	814	2	814	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTACTGGGTCTACTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	5059158	5061625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_5059261_5060352_5060465_5061551
ENSMUSG00000039427.15_9	chr16	+	1286	12	FSM	ENSMUSG00000039427.15	ENST00000684335.1	1296	12	10	0	-8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCGCTCACTCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	5051493	5062418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5051722_5052829_5052908_5053026_5053131_5054183_5054333_5056508_5056599_5056919_5057031_5057769_5057892_5058007_5058047_5058322_5058383_5060352_5060468_5061551_5061628_5062304
ENSMUSG00000039428.12_0	chr7	-	3679	15	FSM	ENSMUSG00000039428.12	ENSMUST00000041968.11	3700	15	15	6	-12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCAAAACAGGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	88987980	88788927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_88791179_88792988_88793057_88793864_88793964_88797177_88797255_88800620_88800685_88803235_88803404_88805634_88805705_88808076_88808224_88814332_88814375_88845320_88845368_88893128_88893195_88929174_88929209_88953888_88953982_88956344_88956473_88987655
ENSMUSG00000039449.15_0	chr2	-	454	4	ISM	ENSMUSG00000039449.15	ENST00000601460.5	531	5	1253	3	1253	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGGATGTGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4640777	4610867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_4610955_4638243_4638400_4640441_4640514_4640638
ENSMUSG00000039449.15_1	chr2	-	526	5	FSM	ENSMUSG00000039449.15	ENST00000601460.5	531	5	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCAGGATGTGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	4642028	4610867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_4610955_4638243_4638400_4640441_4640514_4640638_4640780_4641958
ENSMUSG00000039449.15_5	chr2	-	3506	10	FSM	ENSMUSG00000039449.15	ENSMUST00000035721.14	3522	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATCAATACAGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4656890	4626877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_4629338_4638243_4638400_4640441_4640514_4640638_4640780_4641958_4642028_4643659_4643807_4648461_4648576_4650379_4650485_4653051_4653130_4656726
ENSMUSG00000039450.12_0	chr11	-	825	7	FSM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGCACAGATCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120618069	120616229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUSG00000039450.12_1	chr11	-	880	8	FSM	ENSMUSG00000039450.12	ENSMUST00000026144.5	892	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGCACAGATCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120618100	120616229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120616434_120616563_120616682_120616767_120616833_120616913_120617014_120617094_120617138_120617236_120617392_120617824_120617923_120618003
ENSMUSG00000039450.12_2	chr11	-	753	6	ISM	ENSMUSG00000039450.12	ENSMUST00000106148.10	830	7	153	5	153	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGCACAGATCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120617916	120616229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120616434_120616563_120616723_120616913_120617014_120617094_120617138_120617236_120617392_120617824
ENSMUSG00000039452.7_5	chr9	-	2540	7	FSM	ENSMUSG00000039452.7	ENSMUST00000044711.7	2543	7	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACATTTGTCATTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	65977001	65972460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65974502_65974794_65974863_65975061_65975095_65975408_65975504_65975967_65976073_65976455_65976540_65976887
ENSMUSG00000039456.11_0	chr16	+	4161	17	FSM	ENSMUSG00000039456.11	ENSMUST00000044068.10	4178	17	12	5	12	-5	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGATAAAGGTAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	93629020	93672955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642242_93644169_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUSG00000039456.11_1	chr16	+	4157	17	NNC	ENSMUSG00000039456.11	novel	4178	17	NA	NA	13	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCGATAAAGGTAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	93629021	93672955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_+_93629237_93638258_93638332_93641081_93641215_93642027_93642234_93644164_93644319_93646017_93646166_93649976_93650106_93650666_93650787_93652303_93652402_93657380_93657486_93659301_93659425_93659528_93659604_93661847_93661906_93663262_93663427_93667251_93668141_93670124_93670283_93671646
ENSMUSG00000039458.16_0	chr15	+	6814	16	FSM	ENSMUSG00000039458.16	ENSMUST00000038172.16	6840	16	24	2	-18	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAACAAAAAGCTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	12205137	12274580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12205366_12230359_12230421_12232841_12232988_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ENSMUSG00000039458.16_10	chr15	+	3332	8	FSM	ENSMUSG00000039458.16	ENSMUST00000071993.13	3351	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACACTGTGCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	12205182	12272073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12205366_12230359_12230421_12259704_12259733_12261926_12261998_12263810_12263984_12265629_12265798_12266692_12266855_12269587
ENSMUSG00000039458.16_2	chr15	+	2107	14	FSM	ENSMUSG00000039458.16	ENST00000264934.5	2118	14	8	3	-7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGTTAGCCCAGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	12205163	12270225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12205366_12230359_12230421_12232841_12232992_12233939_12234013_12236103_12236235_12238014_12238106_12245069_12245200_12251438_12251515_12257712_12257820_12258503_12258629_12259653_12259733_12261926_12261998_12263810_12263984_12269587
ENSMUSG00000039461.13_0	chr9	-	1648	3	FSM	ENSMUSG00000039461.13	ENSMUST00000044725.9	1668	3	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTGTATCAGTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108183178	108180165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108181453_108182524_108182628_108182920
ENSMUSG00000039461.13_1	chr9	-	1093	3	FSM	ENSMUSG00000039461.13	ENSMUST00000192886.6	1094	3	1	0	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTTCTTTTTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	108183358	108180852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108181453_108182524_108182580_108182920
ENSMUSG00000039463.15_0	chr2	+	4515	17	FSM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	0	6	0	-4	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGACCTCTGTTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	167263631	167318914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167263686_167266038_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039463.15_12	chr2	+	4460	16	ISM	ENSMUSG00000039463.15	ENSMUST00000047815.13	4521	17	2408	6	2399	-4	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGACCTCTGTTGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	167266039	167318914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_167266218_167276701_167276783_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039463.15_13	chr2	+	4361	15	ISM	ENSMUSG00000039463.15	ENSMUST00000073873.5	4429	16	2413	8	2413	-8	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCTGACCTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	167266053	167318910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_167266218_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039463.15_18	chr2	+	1979	15	ISM	ENSMUSG00000039463.15	ENSMUST00000109218.7	2055	16	2417	12	2417	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTTTACACTGATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	167266057	167316544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_167266218_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301580_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039463.15_4	chr2	+	4421	16	FSM	ENSMUSG00000039463.15	ENSMUST00000073873.5	4429	16	0	8	0	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGCTGACCTCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	167263640	167318910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167263686_167266038_167266218_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301568_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039463.15_7	chr2	+	2051	16	FSM	ENSMUSG00000039463.15	ENSMUST00000109218.7	2055	16	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGATGCATGGCAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	167263640	167316552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167263686_167266038_167266218_167283048_167283108_167285368_167285453_167287425_167287528_167288421_167288457_167293126_167293271_167299246_167299386_167301580_167301675_167307260_167307378_167309604_167309688_167310883_167310996_167313301_167313523_167315353_167315501_167315947_167316096_167316210
ENSMUSG00000039470.16_0	chr8	+	3381	13	FSM	ENSMUSG00000039470.16	ENSMUST00000049389.11	3381	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCGTCTCCATCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	40876855	40938766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_40877211_40898818_40898846_40900091_40900187_40907538_40907660_40909071_40909142_40909703_40909737_40915128_40915250_40917198_40917332_40920469_40920597_40920951_40921045_40925953_40926067_40927775_40927849_40936746
ENSMUSG00000039473.9_0	chr16	+	6338	18	FSM	ENSMUSG00000039473.9	ENSMUST00000230703.2	6356	18	14	4	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4867934	4904149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4868646_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_2	chr16	+	6293	18	FSM	ENSMUSG00000039473.9	ENST00000262376.11	6304	18	9	2	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4867938	4904149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4868605_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039473.9_6	chr16	+	6439	19	FSM	ENSMUSG00000039473.9	ENSMUST00000052449.6	6455	19	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTCTTTCCTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4867947	4904149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4868646_4871591_4871706_4872940_4873229_4879845_4879933_4880398_4880495_4880803_4880939_4881536_4881641_4882211_4882651_4888512_4888584_4889917_4890048_4890170_4890290_4890872_4891002_4891185_4891333_4892185_4892237_4892333_4892377_4894755_4895980_4899281_4899526_4899757_4899848_4901919
ENSMUSG00000039474.14_0	chr5	-	3761	8	FSM	ENSMUSG00000039474.14	ENSMUST00000043964.13	3787	8	17	9	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTATAGCCTTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	37146532	37123456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_37126023_37128901_37129054_37130529_37130611_37131077_37131249_37132814_37132960_37134227_37134311_37139401_37139642_37146209
ENSMUSG00000039476.14_0	chr2	+	1423	4	FSM	ENSMUSG00000039476.14	ENSMUST00000041659.7	1441	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCCACGAGGCTTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	30735082	30771257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30735694_30768421_30768604_30769503_30769683_30770806
ENSMUSG00000039477.17_0	chr5	-	6462	16	FSM	ENSMUSG00000039477.17	ENSMUST00000151477.8	6487	16	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAAACTGTGTGCCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	142803399	142740550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760963_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888_142774515_142775818_142775945_142800769_142801201_142803026
ENSMUSG00000039477.17_2	chr5	-	3594	13	FSM	ENSMUSG00000039477.17	ENST00000502875.1	3610	13	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAGAGAGCAAGCGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	142773095	142741066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142741415_142745465_142745827_142748744_142748917_142750523_142750653_142750805_142750943_142751667_142751844_142757059_142758059_142759373_142759801_142760966_142761155_142761583_142761731_142761930_142762137_142762400_142762498_142772888
ENSMUSG00000039477.17_7	chr5	-	404	3	FSM	ENSMUSG00000039477.17	ENST00000399434.2	412	3	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAAGGGTGGGACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	142804979	142775808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142775945_142778759_142778916_142804867
ENSMUSG00000039478.16_0	chr8	+	2207	15	FSM	ENSMUSG00000039478.16	ENSMUST00000068999.14	2219	15	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCAAGATTTTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	40760502	40837695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_40761452_40788850_40789005_40793338_40793371_40801980_40802060_40805076_40805125_40807343_40807427_40809896_40809969_40812450_40812490_40819189_40819286_40828577_40828679_40829136_40829309_40831872_40831982_40833712_40833871_40835149_40835219_40837649
ENSMUSG00000039480.15_0	chr10	-	2720	12	FSM	ENSMUSG00000039480.15	ENSMUST00000105512.8	2727	12	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTTGTATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	34294531	34179607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274192_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039480.15_1	chr10	-	2725	12	FSM	ENSMUSG00000039480.15	ENSMUST00000047885.14	2743	12	15	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATGTTTGTATTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	34294533	34179607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279646_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039480.15_2	chr10	-	1286	12	FSM	ENSMUSG00000039480.15	ENST00000319550.9	1298	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCCCTTGGTCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	34294447	34180915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279691_34279784_34283530_34283603_34287363_34287456_34294356
ENSMUSG00000039480.15_3	chr10	-	1196	11	ISM	ENSMUSG00000039480.15	ENST00000319550.9	1298	12	6996	7	6996	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATCCCTTGGTCCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	34287456	34180915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_34180976_34186296_34186466_34189584_34189738_34190745_34190865_34198604_34198703_34200283_34200459_34274109_34274195_34275733_34275814_34279691_34279784_34283530_34283603_34287363
ENSMUSG00000039481.6_0	chr17	-	1008	3	FSM	ENSMUSG00000039481.6	ENSMUST00000044752.6	1023	3	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCTGGTCGTTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	57064515	57058324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57058831_57059308_57059491_57064195
ENSMUSG00000039483.11_0	chr2	-	4122	6	FSM	ENSMUSG00000039483.11	ENSMUST00000041726.4	4147	6	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATTAAACTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30720331	30713119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30714517_30714652_30714740_30715463_30715573_30715666_30715774_30716934_30717111_30718085
ENSMUSG00000039483.11_3	chr2	-	989	4	FSM	ENSMUSG00000039483.11	ENST00000277459.8	1007	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGTGATACCCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	30717092	30713879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30714517_30714652_30714740_30715666_30715774_30716934
ENSMUSG00000039485.9_0	chr10	+	3863	1	FSM	ENSMUSG00000039485.9	ENSMUST00000047935.8	3879	1	4	12	4	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAAGCTCTATGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	34173441	34177304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_34173400_34177300
ENSMUSG00000039496.9_0	chr2	+	2988	4	FSM	ENSMUSG00000039496.9	ENSMUST00000036350.3	3013	4	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGACAGAATAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3514120	3527407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3514279_3520337_3520466_3522052_3522195_3524847
ENSMUSG00000039497.9_0	chr10	-	4688	6	FSM	ENSMUSG00000039497.9	ENST00000331677.7	4708	6	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGAGCCTCGTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34060146	34025931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34027707_34028218_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687
ENSMUSG00000039497.9_5	chr10	-	4365	6	FSM	ENSMUSG00000039497.9	ENSMUST00000048010.9	4389	6	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATAATTATGATCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	34083698	34027399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34029971_34031904_34032113_34035964_34036205_34038731_34038986_34059687_34060157_34083075
ENSMUSG00000039497.9_8	chr10	-	883	3	FSM	ENSMUSG00000039497.9	ENST00000647244.1	899	3	9	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATTGTTCATAGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	34060149	34029803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_34029971_34038731_34038986_34059687
ENSMUSG00000039501.15_0	chr2	-	7171	14	FSM	ENSMUSG00000039501.15	ENSMUST00000048988.14	7218	14	30	17	30	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAATGATTGAAAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	166904905	166877729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885915_166886164_166888811_166888927_166889460_166889611_166890352_166890502_166892233_166892366_166897073_166898862_166901951_166902063_166904429
ENSMUSG00000039501.15_1	chr2	-	4137	7	FSM	ENSMUSG00000039501.15	ENSMUST00000067584.7	4147	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATGATTGAAAAAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	166885415	166877728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166881084_166881696_166881793_166882078_166882190_166883613_166883760_166883969_166884125_166884467_166884608_166885281
ENSMUSG00000039509.9_0	chr8	-	5799	26	FSM	ENSMUSG00000039509.9	ENSMUST00000044795.8	5808	26	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTTTCACTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	124675995	124623861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_124626250_124629337_124629427_124631290_124631356_124632952_124633034_124634494_124634614_124636622_124636759_124638487_124638647_124641236_124641371_124641913_124642166_124643022_124643123_124644168_124644292_124645510_124645736_124647586_124647682_124649087_124649252_124653868_124653961_124655982_124656141_124657594_124657743_124660105_124660254_124662825_124662897_124663569_124663726_124664873_124665045_124665778_124665914_124667773_124667882_124670993_124671098_124673231_124673351_124675736
ENSMUSG00000039512.13_0	chr17	+	8612	21	FSM	ENSMUSG00000039512.13	ENSMUST00000114849.3	8634	21	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAACAGCATTGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	28075425	28119004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28075769_28095636_28095800_28095897_28095937_28096295_28096388_28098197_28098388_28098624_28098766_28099108_28099280_28100402_28100590_28102994_28103082_28103407_28103579_28103886_28104027_28104380_28104523_28104874_28105069_28105236_28106667_28108973_28109171_28112114_28112267_28112352_28112504_28113520_28113784_28114243_28114353_28114433_28114535_28114855
ENSMUSG00000039515.12_0	chr2	+	2570	10	FSM	ENSMUSG00000039515.12	ENSMUST00000042055.10	2586	10	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCCCCTGTGTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	30306060	30337811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30306345_30316410_30316509_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039515.12_15	chr2	+	1828	4	FSM	ENSMUSG00000039515.12	ENSMUST00000113601.10	1838	4	10	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTGTGAGACATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	30306152	30337818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30306345_30316410_30316509_30333301_30333410_30336388
ENSMUSG00000039515.12_3	chr2	+	1315	10	FSM	ENSMUSG00000039515.12	ENST00000348141.9	1332	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGGTGCTAAGCAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	30306087	30336576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30306345_30316410_30316516_30318327_30318415_30321972_30322099_30325575_30325694_30327581_30327682_30328240_30328366_30329675_30329777_30333301_30333410_30336388
ENSMUSG00000039518.8_0	chr17	+	2665	2	FSM	ENSMUSG00000039518.8	ENSMUST00000044804.8	2678	2	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACAACCGAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	35863031	35868071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35863183_35865557
ENSMUSG00000039518.8_1	chr17	+	1395	2	FSM	ENSMUSG00000039518.8	ENST00000376288.3	1409	2	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGTTAATGGATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	35865548	35867085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35865972_35866113
ENSMUSG00000039523.17_0	chr4	+	5138	22	FSM	ENSMUSG00000039523.17	ENSMUST00000047497.15	5151	22	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTCATGTCACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	154059659	154093185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154060055_154063400_154063553_154065627_154065802_154066090_154066230_154067520_154067584_154068045_154068132_154069355_154069525_154069771_154069931_154071215_154071432_154072862_154073058_154073580_154073749_154074231_154074406_154077274_154077452_154077926_154078140_154078861_154078970_154079891_154079929_154080728_154080796_154081317_154081427_154086721_154086861_154086984_154087053_154090622_154090714_154091146
ENSMUSG00000039531.9_0	chr10	-	2163	11	FSM	ENSMUSG00000039531.9	ENSMUST00000218055.2	2180	11	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGGTTTCTTGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	33827238	33795137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33795372_33803396_33803618_33804007_33804160_33805816_33805983_33806151_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924_33825495_33825743_33825861_33827126
ENSMUSG00000039531.9_3	chr10	-	1668	8	FSM	ENSMUSG00000039531.9	ENST00000368576.8	1689	8	10	11	10	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAGTTGTAAGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	33825472	33803406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33803618_33804007_33804160_33805816_33805974_33806142_33806341_33811084_33811254_33816153_33816276_33819645_33819757_33824924
ENSMUSG00000039531.9_5	chr10	-	941	4	FSM	ENSMUSG00000039531.9	ENST00000368573.5	959	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGATGTATATGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	33825473	33806181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33806341_33816153_33816276_33819645_33819757_33824924
ENSMUSG00000039536.17_0	chr2	-	3547	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109235.8	3569	12	10	12	-3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATACACCACCATCCTA	NA	NA	NA	NA	NA	NA	NA	NA	166838188	166789480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039536.17_13	chr2	-	2843	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109236.9	2860	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTAAATTTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	166838210	166790200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795266_166796819_166797033_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039536.17_7	chr2	-	2959	12	FSM	ENSMUSG00000039536.17	ENSMUST00000109238.9	2976	12	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTACTAAGAAAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	166838175	166790073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166791280_166791663_166791750_166792150_166792274_166792700_166793021_166793190_166793267_166794245_166794393_166795127_166795272_166796819_166797051_166801942_166802042_166805348_166805515_166806498_166806638_166837953
ENSMUSG00000039542.17_1	chr9	-	2552	17	FSM	ENSMUSG00000039542.17	ENST00000531044.5	2564	17	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGCATCCCCAAATAATCC	NA	NA	NA	NA	NA	NA	NA	NA	49481198	49416687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454306_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125
ENSMUSG00000039542.17_20	chr9	-	6029	18	NNC	ENSMUSG00000039542.17	novel	6050	18	NA	NA	8	-16	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAAAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	49710217	49413451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_49416864_49419888_49420006_49421004_49421213_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481204_49709977
ENSMUSG00000039542.17_94	chr9	-	2558	16	NNC	ENSMUSG00000039542.17	novel	2567	16	NA	NA	-8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAATCATCAGTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	49710180	49428579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_49428883_49431334_49431513_49434821_49434947_49454310_49454443_49455950_49456122_49456452_49456550_49456898_49457084_49457457_49457609_49468395_49468539_49476168_49476342_49476768_49476887_49477974_49478113_49478636_49478781_49479630_49479850_49481125_49481204_49709977
ENSMUSG00000039552.15_0	chr10	+	707	4	FSM	ENSMUSG00000039552.15	ENST00000368580.4	723	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2938	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGATGAGGACTAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	33784071	33790549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_33784298_33787501_33787647_33788957_33789076_33790331
ENSMUSG00000039568.7_0	chr16	-	1833	3	FSM	ENSMUSG00000039568.7	ENSMUST00000037843.7	1851	3	10	8	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCAGGCTCTGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4698169	4692649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4693734_4694225_4694286_4697480
ENSMUSG00000039568.7_1	chr16	-	1388	3	FSM	ENSMUSG00000039568.7	ENST00000590965.1	1403	3	8	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCACCACCAGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4697660	4692654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4693734_4694225_4694321_4697446
ENSMUSG00000039568.7_10	chr16	-	645	3	FSM	ENSMUSG00000039568.7	ENST00000587649.1	660	3	9	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCCTTCCCCGACTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	4697658	4693476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4693734_4694225_4694286_4697330
ENSMUSG00000039568.7_4	chr16	-	682	3	FSM	ENSMUSG00000039568.7	ENST00000587615.1	697	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCATGCAAGTTCACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	4697656	4693212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4693659_4694225_4694286_4697480
ENSMUSG00000039577.18_0	chr4	+	5011	30	FSM	ENSMUSG00000039577.18	ENSMUST00000081393.10	5027	30	16	0	16	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCTCTTCTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	152562614	152647640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152562897_152568816_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622231_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402_152631584_152636260_152636387_152638978_152639185_152639929_152640157_152640675_152640863_152641448_152641533_152643784_152643942_152644134_152644221_152644720_152644807_152645634_152645807_152646030_152646211_152646462_152646607_152647094
ENSMUSG00000039577.18_2	chr4	+	2460	17	FSM	ENSMUSG00000039577.18	ENST00000622020.4	2472	17	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCTGGCAGCTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	152568866	152631585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152568998_152573198_152573352_152581105_152581279_152582633_152582699_152583388_152583545_152587330_152587462_152590817_152591000_152591813_152591941_152602549_152602733_152608698_152608826_152620366_152620429_152621639_152621757_152622251_152622381_152622476_152622669_152623279_152623468_152628755_152628917_152631402
ENSMUSG00000039578.18_0	chr6	+	5649	11	NNC	ENSMUSG00000039578.18	novel	5657	11	NA	NA	0	-10	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTGTAACCACTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	61157307	62359839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_61157638_61287797_61289157_61290637_61290820_61350944_61351039_61399940_61400062_61547653_61547862_61615422_61615498_61695128_61695213_61787614_61787693_61933672_61933718_62356766
ENSMUSG00000039578.18_8	chr6	+	2680	10	NNC	ENSMUSG00000039578.18	novel	2688	10	NA	NA	2	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGTAGAAAAATCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	61287840	62357243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_61289157_61290637_61290820_61350944_61351039_61399940_61400062_61547653_61547862_61615422_61615498_61695128_61695213_61787614_61787693_61933672_61933718_62356766
ENSMUSG00000039585.16_0	chr9	+	12236	44	FSM	ENSMUSG00000039585.16	ENSMUST00000136740.8	12252	44	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGCAATATGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59658184	59836139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59819819_59819874_59829005_59829209_59830903_59831026_59831853
ENSMUSG00000039585.16_1	chr9	+	12186	43	FSM	ENSMUSG00000039585.16	ENSMUST00000135298.8	12198	43	2	10	2	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGCAATATGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59658180	59836139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59782484_59782698_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ENSMUSG00000039585.16_2	chr9	+	11962	42	FSM	ENSMUSG00000039585.16	ENSMUST00000128341.2	11985	42	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGTGCAATATGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59658191	59836139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_59658629_59686825_59687737_59690753_59690849_59694096_59694160_59695697_59695798_59697318_59697376_59709196_59709295_59711167_59711295_59716681_59716772_59719184_59719302_59722526_59722662_59728867_59728990_59731473_59731616_59734405_59734602_59739471_59739592_59750345_59750422_59762648_59762796_59764089_59764130_59767362_59767486_59768707_59768789_59771198_59771310_59772849_59772973_59775393_59775544_59776756_59777077_59777718_59779315_59781884_59781967_59791762_59791876_59796695_59796839_59801423_59801648_59802043_59802161_59802475_59802665_59803772_59803821_59807632_59807745_59810189_59810252_59813174_59813368_59814630_59814760_59815476_59815583_59817098_59817231_59817866_59817991_59829005_59829209_59830903_59831026_59831853
ENSMUSG00000039599.17_0	chr14	+	2353	14	FSM	ENSMUSG00000039599.17	ENSMUST00000090499.13	2370	14	8	9	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	20398297	20433550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ENSMUSG00000039599.17_1	chr14	+	4453	8	FSM	ENSMUSG00000039599.17	ENSMUST00000224721.2	4483	8	30	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGACAGTTATTCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	20398357	20421410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20408091_20408209_20409822_20409985_20413330_20413519_20417913
ENSMUSG00000039599.17_2	chr14	+	2042	12	FSM	ENSMUSG00000039599.17	ENSMUST00000090503.12	2053	12	2	9	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTTAAGTTCTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	20398329	20433550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20398463_20401379_20401485_20402771_20402908_20406422_20406566_20413330_20413519_20424397_20424523_20425577_20425682_20427842_20428068_20428467_20428592_20428831_20428952_20431816_20431890_20432984
ENSMUSG00000039601.17_0	chr17	+	2894	5	FSM	ENSMUSG00000039601.17	ENSMUST00000229744.2	2914	5	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAGAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	44112744	44349941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44112988_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ENSMUSG00000039601.17_3	chr17	+	3216	5	FSM	ENSMUSG00000039601.17	ENSMUST00000044895.13	3226	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACTGTCTGTGTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	44114897	44350397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44115007_44147161_44147389_44328657_44328832_44331843_44332016_44347863
ENSMUSG00000039601.17_7	chr17	+	3299	4	FSM	ENSMUSG00000039601.17	ENSMUST00000044792.6	3313	4	8	6	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTCTGTGTGGCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	44264013	44350401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_44264429_44328657_44328832_44331843_44332016_44347863
ENSMUSG00000039607.18_0	chr9	-	7879	15	FSM	ENSMUSG00000039607.18	ENSMUST00000111773.10	7908	15	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATCAACAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	117081518	116401829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_116407771_116411805_116411934_116415085_116415164_116456957_116457006_116465436_116465548_116507714_116507766_116510198_116510296_116524887_116524935_116548383_116548491_116634480_116634561_116651806_116651965_116788535_116788628_116885804_116885864_116939028_116939187_117080794
ENSMUSG00000039607.18_3	chr9	-	3292	14	FSM	ENSMUSG00000039607.18	ENSMUST00000068962.14	3320	14	12	16	-4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATACCACAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	117081535	116406382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_116407771_116411805_116411934_116415085_116415164_116456957_116457006_116465436_116465548_116510198_116510296_116524887_116524935_116548383_116548491_116634480_116634561_116651806_116651965_116788535_116788628_116885804_116885864_116939028_116939187_117080794
ENSMUSG00000039607.18_4	chr9	-	1974	13	FSM	ENSMUSG00000039607.18	ENSMUST00000044901.14	1983	13	9	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAATGGTTCCTCCGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	117081542	116407582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_116407771_116415085_116415164_116465436_116465548_116507714_116507766_116510198_116510296_116524887_116524935_116548383_116548491_116634480_116634561_116651806_116651965_116788535_116788628_116885804_116885864_116939028_116939187_117080794
ENSMUSG00000039611.3_0	chr4	-	2962	2	FSM	ENSMUSG00000039611.3	ENSMUST00000042750.3	2989	2	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCTCCAATAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	49597855	49584511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_49587242_49597623
ENSMUSG00000039615.10_1	chr17	-	1793	7	FSM	ENSMUSG00000039615.10	ENSMUST00000044911.10	1803	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGAAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	26052325	26049478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26051665
ENSMUSG00000039615.10_3	chr17	-	1323	7	FSM	ENSMUSG00000039615.10	ENSMUST00000237186.2	1341	7	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGGGCTTGCCAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	26052361	26049590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051219_26052059
ENSMUSG00000039615.10_4	chr17	-	1304	7	FSM	ENSMUSG00000039615.10	ENSMUST00000236361.2	1320	7	9	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTACATTGGCATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	26051912	26049616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050517_26050606_26050769_26050936_26051019_26051281_26051665
ENSMUSG00000039615.10_6	chr17	-	550	5	FSM	ENSMUSG00000039615.10	ENST00000416154.2	564	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGACTATTGAGGCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	26050921	26049871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26049985_26050075_26050193_26050282_26050340_26050494_26050606_26050769
ENSMUSG00000039621.14_0	chr2	-	6505	40	FSM	ENSMUSG00000039621.14	ENSMUST00000036719.12	6533	40	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATACAAATAAGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	166555736	166408273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_166409771_166410971_166411040_166411265_166411369_166412254_166412428_166413449_166413517_166414858_166414974_166415074_166415219_166416040_166416141_166417465_166417687_166418583_166418626_166419797_166419927_166422136_166422228_166422336_166422420_166423826_166423916_166425029_166425243_166426951_166427226_166427652_166427864_166428442_166428605_166428966_166429155_166430873_166430980_166431429_166431567_166432353_166432440_166434120_166434270_166434715_166434809_166435679_166435823_166438205_166438279_166441525_166441602_166443446_166443497_166443643_166443748_166444735_166444837_166451657_166451806_166453547_166453698_166455061_166455181_166459752_166459887_166463091_166463254_166475285_166475388_166480234_166480340_166486668_166486792_166488893_166488966_166555434
ENSMUSG00000039623.14_0	chr5	+	3683	17	FSM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGAGGGCGCGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	142449812	142464463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_142449891_142452012_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUSG00000039623.14_4	chr5	+	3676	17	NNC	ENSMUSG00000039623.14	novel	3689	17	NA	NA	3	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGTATTCATGAGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	142449811	142464456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_142449891_142452012_142452148_142452244_142452432_142453397_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUSG00000039623.14_9	chr5	+	3607	16	ISM	ENSMUSG00000039623.14	ENSMUST00000038699.13	3689	17	2202	2	2182	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGAGGGCGCGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	142452010	142464463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_142452148_142452244_142452432_142453396_142453542_142453775_142453886_142454618_142454788_142455761_142455903_142456044_142456083_142456148_142456312_142457957_142458140_142459662_142459806_142460128_142460270_142460629_142460742_142461457_142461556_142462448_142462582_142462651_142462867_142462970
ENSMUSG00000039628.10_0	chr17	+	1212	2	FSM	ENSMUSG00000039628.10	ENSMUST00000044922.8	1220	2	7	1	-6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGACTTGAAGGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	24971983	24977657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24972473_24976934
ENSMUSG00000039629.15_0	chr6	+	5276	21	FSM	ENSMUSG00000039629.15	ENSMUST00000151738.4	5281	21	1	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGAAATCTGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29917011	29959670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955514_29955636_29956656
ENSMUSG00000039629.15_1	chr6	+	5355	21	FSM	ENSMUSG00000039629.15	ENSMUST00000046028.12	5370	21	5	10	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAGAAATCTGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29917016	29959670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29917230_29920460_29920531_29923913_29923989_29924964_29925103_29926555_29926677_29927319_29927389_29927585_29927693_29928433_29928562_29929778_29929983_29931118_29931355_29931762_29931829_29932201_29932266_29932988_29933061_29937579_29937655_29938460_29938559_29939035_29939163_29941837_29941939_29944424_29944492_29953347_29953453_29955430_29955636_29956656
ENSMUSG00000039630.11_1	chr1	-	7621	14	FSM	ENSMUSG00000039630.11	ENSMUST00000037748.9	7640	14	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTAATATAACATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	178165351	178151915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_178156973_178157432_178157505_178157729_178157912_178158156_178158412_178158657_178158827_178158913_178159043_178159399_178159520_178159657_178159922_178160561_178160675_178161111_178161212_178161451_178161592_178163446_178163521_178163611_178163724_178164517
ENSMUSG00000039633.8_0	chr8	-	3919	12	FSM	ENSMUSG00000039633.8	ENSMUST00000239119.2	3930	12	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCATAATACTCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	36716669	36683227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_36684756_36686979_36687133_36689769_36689933_36690017_36690177_36692710_36692833_36696289_36696405_36697234_36697332_36697436_36697678_36698191_36698342_36701053_36701177_36703142_36703262_36715720
ENSMUSG00000039634.13_0	chr4	+	2818	4	FSM	ENSMUSG00000039634.13	ENSMUST00000042964.13	2835	4	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAATAATAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	49521182	49531507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_49521252_49521422_49521596_49522397_49522483_49529016
ENSMUSG00000039634.13_1	chr4	+	2946	3	FSM	ENSMUSG00000039634.13	ENSMUST00000107696.2	2965	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTGGAAATAATAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	49521226	49531508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_49521596_49522397_49522483_49529016
ENSMUSG00000039637.16_0	chr16	-	4272	28	FSM	ENSMUSG00000039637.16	ENSMUST00000038552.13	4296	28	19	5	19	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATAGAGCAGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	4497622	4444001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4445364_4445473_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUSG00000039637.16_13	chr16	-	1139	10	FSM	ENSMUSG00000039637.16	ENSMUST00000090480.6	1150	10	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGTGAAGAGAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	4497633	4470429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4470626_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4487721_4487906_4488365_4488437_4493626_4493702_4494799_4494897_4497415
ENSMUSG00000039637.16_3	chr16	-	2438	24	FSM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGAGTGGCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4494891	4445478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4493626_4493702_4494799
ENSMUSG00000039637.16_4	chr16	-	2349	23	ISM	ENSMUSG00000039637.16	ENST00000574025.5	2448	24	1191	6	1191	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGTGAGTGGCACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4493704	4445478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_4445561_4446047_4446140_4446539_4446676_4446919_4447037_4448051_4448142_4448227_4448370_4449312_4449399_4449674_4449780_4449850_4449994_4450082_4450170_4450276_4450386_4451118_4451295_4451577_4451702_4452162_4452295_4452452_4452546_4452625_4452772_4452848_4452907_4453247_4453303_4472873_4472957_4473411_4473499_4479728_4479780_4486607_4486685_4493626
ENSMUSG00000039640.8_1	chr11	+	1298	5	FSM	ENSMUSG00000039640.8	ENSMUST00000043627.8	1316	5	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAGCAAAGTGTAACCC	NA	NA	NA	NA	NA	NA	NA	NA	120375451	120379886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120375595_120376068_120376256_120376481_120376569_120378922_120379061_120379143
ENSMUSG00000039646.6_0	chr16	+	2823	2	FSM	ENSMUSG00000039646.6	ENSMUST00000038770.4	2829	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGCTTGAGATTTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	4457810	4468666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_4458013_4466045
ENSMUSG00000039648.15_0	chr2	-	1854	13	FSM	ENSMUSG00000039648.15	ENSMUST00000044038.10	1876	13	13	9	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCTCAAGGCAGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30095846	30075144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30095644
ENSMUSG00000039648.15_2	chr2	-	1821	13	FSM	ENSMUSG00000039648.15	ENSMUST00000113662.8	1850	13	29	0	29	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCAGCTTCTCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30095758	30075137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084173_30095644
ENSMUSG00000039648.15_5	chr2	-	2013	14	FSM	ENSMUSG00000039648.15	ENSMUST00000113663.9	2026	14	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAACCCTCAAGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	30095807	30075149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30075582_30075678_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084125_30087968_30088172_30095644
ENSMUSG00000039648.15_7	chr2	-	1568	12	FSM	ENSMUSG00000039648.15	ENST00000436267.7	1586	12	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTAGAGAAAGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	30088154	30075681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30075766_30076203_30076284_30076368_30076556_30076657_30076748_30076844_30076922_30077198_30077320_30077700_30077830_30078064_30078152_30078226_30078377_30081936_30082085_30084065_30084295_30087968
ENSMUSG00000039652.17_0	chr19	-	7696	11	FSM	ENSMUSG00000039652.17	ENST00000265997.5	7718	11	16	6	16	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGCACTGACACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	37184833	36996749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_36998382_36998446_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065961_37103731_37103789_37116461_37116622_37151366_37152386_37184693
ENSMUSG00000039652.17_3	chr19	-	7498	10	FSM	ENSMUSG00000039652.17	ENST00000412050.8	7522	10	18	6	18	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGAAGCACTGACACGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	37152369	36996749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_36998382_36998446_37002488_37021921_37022104_37031659_37031775_37045572_37045692_37064937_37065028_37065819_37065988_37103731_37103789_37116530_37116622_37151366
ENSMUSG00000039656.18_0	chr17	+	2603	10	FSM	ENSMUSG00000039656.18	ENSMUST00000044858.16	2627	10	16	8	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAATAGCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34250801	34257363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUSG00000039656.18_1	chr17	+	2563	10	FSM	ENSMUSG00000039656.18	ENSMUST00000174299.9	2577	10	4	10	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAATAGCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34250829	34257363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34251198_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUSG00000039656.18_10	chr17	+	2196	9	ISM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	425	4	425	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAATAGCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34251799	34257363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUSG00000039656.18_3	chr17	+	2489	10	FSM	ENSMUSG00000039656.18	ENSMUST00000173354.9	2502	10	7	6	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAATAGCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34251176	34257363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255834_34255939_34256140_34256247_34256357
ENSMUSG00000039656.18_9	chr17	+	2275	10	FSM	ENSMUSG00000039656.18	ENSMUST00000116612.3	2283	10	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAATAGCCATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	34251378	34257363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34251459_34251800_34252019_34252528_34252686_34252995_34253176_34254627_34254801_34255298_34255429_34255598_34255732_34255846_34255939_34256140_34256247_34256357
ENSMUSG00000039660.17_0	chr2	-	1793	12	FSM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGAGGAATGAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30068461	30063493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931_30067978_30068401
ENSMUSG00000039660.17_1	chr2	-	1737	11	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	485	7	485	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAATGAGCTCTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	30067977	30063489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604_30067734_30067931
ENSMUSG00000039660.17_2	chr2	-	1691	10	ISM	ENSMUSG00000039660.17	ENSMUST00000100220.5	1805	12	729	7	729	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAATGAGCTCTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	30067733	30063489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_30064198_30064933_30065082_30065198_30065302_30065725_30065825_30065930_30066004_30066373_30066505_30066626_30066677_30066750_30066841_30067334_30067495_30067604
ENSMUSG00000039662.17_0	chr4	+	4904	5	FSM	ENSMUSG00000039662.17	ENSMUST00000048892.14	4919	5	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGAGGAGTCCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	152381696	152391576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152382026_152383141_152383231_152384127_152384298_152384993_152385212_152387478
ENSMUSG00000039670.3_0	chr11	-	798	2	FSM	ENSMUSG00000039670.3	ENSMUST00000044007.3	813	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAACCATGCAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	120348886	120347438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120347989_120348638
ENSMUSG00000039671.19_26	chr2	-	3275	20	FSM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGTAAGTATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	165717695	165629089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624
ENSMUSG00000039671.19_27	chr2	-	3204	19	ISM	ENSMUSG00000039671.19	ENST00000617418.4	3283	20	23629	6	6025	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTGTAAGTATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	165694068	165629089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_165629168_165633824_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919
ENSMUSG00000039671.19_60	chr2	-	3391	21	FSM	ENSMUSG00000039671.19	ENST00000352431.6	3394	21	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTATGTCGCCCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	165726568	165633827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624_165717696_165726527
ENSMUSG00000039671.19_61	chr2	-	3343	20	ISM	ENSMUSG00000039671.19	ENST00000352431.6	3394	21	8883	0	12	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTCGCCCCCTGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	165717685	165633824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_165633892_165634723_165634888_165636314_165636555_165638002_165638082_165639853_165639935_165647106_165647298_165649594_165649850_165654268_165654779_165657236_165657390_165662461_165662609_165670127_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688160_165693919_165694069_165717624
ENSMUSG00000039671.19_92	chr2	-	2498	11	FSM	ENSMUSG00000039671.19	ENSMUST00000109262.8	2515	11	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCCCCTTTGCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	165738860	165669108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165670610_165675228_165675345_165676809_165676888_165679200_165679257_165680731_165680820_165681917_165682011_165684683_165684798_165687940_165688085_165693919_165694069_165717624_165717696_165738772
ENSMUSG00000039678.13_0	chr2	+	3583	12	FSM	ENSMUSG00000039678.13	ENSMUST00000044556.12	3595	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGCGTGTCGGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30023762	30042018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30023925_30024808_30024883_30026684_30026726_30027132_30027195_30027293_30027394_30030486_30030570_30032273_30032434_30036663_30036875_30037373_30037538_30038634_30038796_30038942_30039001_30039711
ENSMUSG00000039680.11_1	chr16	+	829	3	FSM	ENSMUSG00000039680.11	ENSMUST00000047429.9	846	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3333	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAACACTGACGGCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91855167	91909108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91855369_91896481_91896622_91908620
ENSMUSG00000039682.13_0	chr5	+	2251	13	FSM	ENSMUSG00000039682.13	ENSMUST00000046122.11	2267	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1986	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGATTCAGTTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	45650725	45670027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_45650904_45652507_45652624_45654261_45654317_45654670_45654777_45655775_45655936_45657744_45657910_45660721_45660881_45662064_45662190_45663515_45663605_45664448_45664552_45666779_45666860_45668449_45668560_45669222
ENSMUSG00000039683.17_0	chr5	+	7282	43	FSM	ENSMUSG00000039683.17	ENST00000389531.7	7294	43	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCAACCGGGGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	141568053	142198940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_141568208_141595749_141595857_141598847_141598996_141778682_141778817_141921798_141921911_141923285_141923477_141934260_141934345_141938758_141938954_141940608_141940726_141941845_141942014_141944962_141945066_141948419_141948597_141961332_141961470_141984493_141984642_141985594_141985736_141992378_141992561_142017334_142017451_142020107_142020301_142023988_142024088_142031882_142032075_142036916_142037039_142067371_142067482_142070216_142070368_142071342_142071581_142080278_142080395_142082488_142082679_142085868_142085968_142100145_142100341_142105266_142105469_142113525_142113630_142117778_142117850_142129526_142129663_142132014_142132117_142144285_142144402_142147529_142147717_142150205_142150344_142158196_142158359_142159424_142159551_142170911_142171077_142173771_142173910_142177631_142177753_142183499_142183630_142197675
ENSMUSG00000039683.17_2	chr5	+	7264	43	NNC	ENSMUSG00000039683.17	novel	7294	43	NA	NA	30	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCAACCGGGGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	141568075	142198940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_141568208_141595749_141595857_141598847_141598996_141778682_141778817_141921798_141921911_141923285_141923477_141934260_141934345_141938758_141938954_141940608_141940730_141941845_141942014_141944962_141945066_141948419_141948597_141961332_141961470_141984493_141984642_141985594_141985736_141992378_141992561_142017334_142017451_142020107_142020301_142023988_142024088_142031882_142032075_142036916_142037039_142067371_142067482_142070216_142070368_142071342_142071581_142080278_142080395_142082488_142082679_142085868_142085968_142100145_142100341_142105266_142105469_142113525_142113630_142117778_142117850_142129526_142129663_142132014_142132117_142144285_142144402_142147529_142147717_142150205_142150344_142158196_142158359_142159424_142159551_142170911_142171077_142173771_142173910_142177631_142177753_142183499_142183630_142197675
ENSMUSG00000039686.15_0	chr2	-	4055	16	FSM	ENSMUSG00000039686.15	ENSMUST00000044751.14	4100	16	37	8	37	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCAGGAGAGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30014429	29987302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000433_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ENSMUSG00000039686.15_1	chr2	-	4176	16	FSM	ENSMUSG00000039686.15	ENSMUST00000113677.3	4189	16	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCAGGAGAGTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30014589	29987302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29988856_29990325_29990429_29991047_29991146_29991776_29991966_29992740_29992857_29993328_29993449_29993550_29993593_29994818_29995035_29997506_29997681_29997987_29998135_29998232_29998348_30000216_30000394_30000673_30001111_30001193_30001345_30003257_30003494_30014287
ENSMUSG00000039693.12_1	chr4	+	1582	3	FSM	ENSMUSG00000039693.12	ENSMUST00000061135.8	1589	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTATAGTTACACTG	NA	NA	NA	NA	NA	NA	NA	NA	48539934	48561911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48539998_48552379_48552831_48560843
ENSMUSG00000039693.12_10	chr4	+	1517	2	ISM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	11883	8	11883	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTATAGTTACACTG	NA	NA	NA	NA	NA	NA	NA	NA	48552381	48561911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_48552831_48560843
ENSMUSG00000039693.12_4	chr4	+	759	4	FSM	ENSMUSG00000039693.12	ENST00000374885.5	768	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGGTGCTTTAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	48540466	48560990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48540569_48552379_48552831_48555818_48555878_48560843
ENSMUSG00000039693.12_8	chr4	+	1587	3	FSM	ENSMUSG00000039693.12	ENSMUST00000107704.2	1597	3	2	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTTATAGTTACACTG	NA	NA	NA	NA	NA	NA	NA	NA	48540500	48561911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48540569_48552379_48552831_48560843
ENSMUSG00000039697.17_0	chr10	-	5095	16	FSM	ENSMUSG00000039697.17	ENSMUST00000068567.5	5105	16	4	6	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGTGAATTTCTTTCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	30679099	30521585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30538289_30538438_30565699_30565869_30566752_30567784_30570064_30570250_30572063_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
ENSMUSG00000039697.17_1	chr10	-	1981	6	FSM	ENSMUSG00000039697.17	ENSMUST00000216172.2	2026	6	30	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAAAAAGAAAATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	30531833	30522322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30523648_30523962_30524037_30524440_30524537_30528931_30529085_30530306_30530439_30531632
ENSMUSG00000039697.17_2	chr10	-	1397	7	FSM	ENSMUSG00000039697.17	ENSMUST00000215725.2	1445	7	33	15	33	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACAATCATTAAATGGAA	NA	NA	NA	NA	NA	NA	NA	NA	30679289	30571901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30572190_30574125_30574240_30577914_30578023_30580596_30580677_30598641_30598863_30647715_30647837_30678824
ENSMUSG00000039701.12_0	chr3	-	3542	9	FSM	ENSMUSG00000039701.12	ENSMUST00000197314.5	3586	9	37	7	37	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTGTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122778116	122749241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122751381_122752680_122752787_122754803_122754887_122754967_122755082_122756532_122756668_122757903_122757997_122762237_122762899_122776333_122776359_122777930
ENSMUSG00000039703.16_0	chr11	-	4103	17	FSM	ENSMUSG00000039703.16	ENSMUST00000044271.15	4121	17	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGATTGTCCTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	120328523	120271202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUSG00000039703.16_1	chr11	-	4009	16	FSM	ENSMUSG00000039703.16	ENSMUST00000103017.4	4025	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCGATTGTCCTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	120328525	120271202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120273453_120274122_120274226_120275368_120275486_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309070_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUSG00000039703.16_12	chr11	-	1788	16	FSM	ENSMUSG00000039703.16	ENST00000374747.9	1809	16	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAGTGTTCTCGATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120328455	120274123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120274226_120275368_120275486_120276595_120276692_120280193_120280266_120295031_120295193_120299598_120299726_120300437_120300510_120302483_120302571_120304385_120304566_120307082_120307207_120309066_120309166_120309894_120309944_120312190_120312368_120319349_120319463_120323873_120323955_120328324
ENSMUSG00000039704.9_0	chr15	+	8069	18	FSM	ENSMUSG00000039704.9	ENSMUST00000227556.3	8098	18	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTACAGTCTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	9140655	9202559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_9140828_9149062_9149293_9149541_9149640_9151570_9151667_9156292_9156461_9157299_9157511_9165874_9165950_9171183_9171298_9172143_9172328_9175210_9175393_9175872_9176007_9177738_9177845_9178348_9178447_9182571_9182676_9183996_9184044_9186682_9186789_9194761_9194889_9196742
ENSMUSG00000039706.12_0	chr5	-	2666	8	FSM	ENSMUSG00000039706.12	ENST00000502640.5	2682	8	11	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACCAAAGTAAGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	44956980	44629491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_44631122_44636434_44636587_44637567_44637692_44690002_44690087_44692379_44692503_44699028_44699202_44826698_44826802_44956703
ENSMUSG00000039713.18_0	chr4	+	3919	22	FSM	ENSMUSG00000039713.18	ENSMUST00000105662.8	3933	22	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCCGTGGAAAGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	152156963	152199842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152157158_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ENSMUSG00000039713.18_1	chr4	+	3805	22	FSM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCCGTGGAAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152171320	152199840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152171403_152172101_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ENSMUSG00000039713.18_10	chr4	+	4093	20	FSM	ENSMUSG00000039713.18	ENSMUST00000084115.4	4113	20	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAGTCATGCGCTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152181190	152199852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152181365_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254
ENSMUSG00000039713.18_8	chr4	+	3724	21	ISM	ENSMUSG00000039713.18	ENSMUST00000118648.8	3818	22	786	7	786	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCCGTGGAAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152172100	152199840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_152172179_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ENSMUSG00000039713.18_9	chr4	+	3828	21	FSM	ENSMUSG00000039713.18	ENSMUST00000105661.10	3842	21	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTCCGTGGAAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152181182	152199840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152181365_152186500_152186631_152187446_152187550_152187870_152187932_152188207_152188300_152188665_152188803_152189064_152189214_152190523_152190734_152190825_152191018_152191362_152191459_152191914_152191966_152192168_152192319_152192432_152192544_152192637_152192788_152192859_152192998_152193134_152193255_152196564_152196698_152196779_152196896_152196975_152197158_152198254_152199026_152199286
ENSMUSG00000039715.9_2	chr2	-	1791	9	FSM	ENSMUSG00000039715.9	ENSMUST00000113711.3	1814	9	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACTCTACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	29938884	29921571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29921985_29922084_29922243_29922413_29922647_29922761_29922930_29923285_29923396_29923817_29923976_29924774_29924885_29928186_29928439_29938695
ENSMUSG00000039720.8_0	chr8	-	938	7	FSM	ENSMUSG00000039720.8	ENST00000307599.5	958	7	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACCTGTAAGTTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	27690918	27687963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_27688099_27688420_27688587_27689294_27689446_27689537_27689652_27689884_27689976_27690260_27690373_27690749
ENSMUSG00000039725.7_0	chr2	-	1865	2	FSM	ENSMUSG00000039725.7	ENSMUST00000039007.7	1880	2	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAACAGTTTTCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	165335239	165332039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_165333632_165334966
ENSMUSG00000039735.17_0	chr3	-	4132	16	FSM	ENSMUSG00000039735.17	ENST00000271234.13	4151	16	13	6	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTAAGATGTGTACTTATC	NA	NA	NA	NA	NA	NA	NA	NA	122413326	122332373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122334574_122335773_122335933_122338192_122338342_122339948_122340044_122340591_122340725_122342804_122342928_122350060_122350220_122351551_122351756_122352668_122352816_122354481_122354611_122357483_122357589_122362401_122362465_122363243_122363392_122364539_122364594_122383776_122383893_122413178
ENSMUSG00000039737.12_0	chr5	-	3877	6	FSM	ENSMUSG00000039737.12	ENSMUST00000151786.8	3893	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAAGTCACTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	136227808	136206987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136210351_136218405_136218474_136220753_136220840_136223150_136223252_136226633_136226713_136227628
ENSMUSG00000039738.17_1	chr16	-	5686	15	FSM	ENSMUSG00000039738.17	ENSMUST00000040790.14	5706	15	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAATAAACTAGACACT	NA	NA	NA	NA	NA	NA	NA	NA	3819540	3797002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3798037_3798444_3798556_3798684_3798859_3799448_3799552_3802854_3805041_3805778_3805946_3806836_3806984_3808094_3808181_3808566_3808781_3809335_3809653_3809779_3809986_3812571_3812785_3813557_3813742_3816981_3817210_3819224
ENSMUSG00000039740.7_0	chr4	-	2999	2	FSM	ENSMUSG00000039740.7	ENSMUST00000044148.3	3021	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGATGGTCCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47474318	47469839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_47472459_47473938
ENSMUSG00000039741.16_0	chr11	+	10688	28	FSM	ENSMUSG00000039741.16	ENSMUST00000122148.8	10712	28	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGTTCAGTGGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	120123790	120183102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120123934_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ENSMUSG00000039741.16_1	chr11	+	10726	28	FSM	ENSMUSG00000039741.16	ENSMUST00000044985.14	10726	28	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGACTGTACCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120123772	120183122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120123934_120127685_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174215_120174821_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ENSMUSG00000039741.16_9	chr11	+	10704	27	FSM	ENSMUSG00000039741.16	ENSMUST00000118987.2	10712	27	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGTTCAGTGGTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	120127526	120183102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120128084_120149897_120150078_120159132_120159256_120162184_120163931_120164140_120164250_120164519_120164699_120164809_120164969_120165244_120165523_120165697_120166029_120166883_120167700_120169880_120170081_120170195_120170333_120170895_120171025_120172944_120173060_120173921_120174211_120174817_120175001_120175079_120175382_120175545_120175654_120175737_120175889_120175970_120176086_120176184_120176261_120176396_120176506_120177126_120177244_120177418_120177596_120177749_120178931_120180133_120180371_120180502
ENSMUSG00000039745.9_0	chr7	+	1402	6	FSM	ENSMUSG00000039745.9	ENSMUST00000085272.7	1418	6	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCGAGGAATAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49408885	49423716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49409060_49409289_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_2	chr7	+	1324	6	FSM	ENSMUSG00000039745.9	ENSMUST00000207895.2	1338	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCGAGGAATAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49408907	49423716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49409060_49409345_49409542_49411807_49411916_49420557_49420696_49422323_49422386_49423048
ENSMUSG00000039745.9_3	chr7	+	572	4	FSM	ENSMUSG00000039745.9	ENST00000531058.1	583	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACAGGGATGTGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	49409338	49423247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49409542_49411807_49411916_49422323_49422386_49423048
ENSMUSG00000039747.12_0	chr5	-	3880	3	FSM	ENSMUSG00000039747.12	ENSMUST00000041048.6	3908	3	15	13	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTTTAAAAACTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136199552	136176325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136179807_136190340_136190579_136199391
ENSMUSG00000039747.12_1	chr5	-	3971	5	FSM	ENSMUSG00000039747.12	ENSMUST00000196454.5	3990	5	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAAAACTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	136199468	136176322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_136179807_136190340_136190579_136196678_136196742_136197219_136197329_136199391
ENSMUSG00000039748.12_0	chr1	+	7780	15	FSM	ENSMUSG00000039748.12	ENSMUST00000039725.12	7796	15	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAGCTATTTGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	175708154	175741047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_175708423_175708697_175708767_175710460_175710635_175714255_175714376_175715143_175715268_175716289_175716428_175719499_175719713_175720439_175720628_175721306_175721401_175723693_175723920_175726954_175727199_175728445_175729020_175731901_175732004_175733361_175733556_175735995
ENSMUSG00000039753.17_0	chr5	-	2840	11	FSM	ENSMUSG00000039753.17	ENSMUST00000047857.16	2858	11	9	9	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCAATATCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43939483	43901966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUSG00000039753.17_3	chr5	-	2777	11	FSM	ENSMUSG00000039753.17	ENSMUST00000196483.5	2814	11	28	9	21	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCAATATCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43939423	43901966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_43902718_43908203_43908353_43915563_43916287_43917084_43917168_43918048_43918195_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUSG00000039753.17_7	chr5	-	4216	9	FSM	ENSMUSG00000039753.17	ENSMUST00000087465.11	4237	9	21	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTCTGAGCATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	43939442	43913246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_43916287_43917084_43917168_43918048_43918198_43920158_43920285_43922650_43922834_43925405_43925593_43928078_43928175_43930785_43931002_43939306
ENSMUSG00000039754.11_0	chr5	+	1765	3	FSM	ENSMUSG00000039754.11	ENSMUST00000041100.4	1773	3	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAATGAATTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	136165010	136170461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136165149_136168191_136168390_136169032
ENSMUSG00000039756.13_0	chr3	+	2412	7	FSM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAATTGTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122068043	122078910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122068128_122068846_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039756.13_1	chr3	+	2329	6	ISM	ENSMUSG00000039756.13	ENSMUST00000035776.10	2429	7	809	10	809	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATCAATTGTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	122068845	122078910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_122070460_122072394_122072534_122074376_122074473_122075977_122076143_122078042_122078153_122078705
ENSMUSG00000039759.11_0	chr4	-	1109	4	FSM	ENSMUSG00000039759.11	ENSMUST00000036680.8	1124	4	15	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGGCTGTCACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	152073439	152067095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152067810_152068091_152068194_152070125_152070319_152073339
ENSMUSG00000039759.11_2	chr4	-	655	4	FSM	ENSMUSG00000039759.11	ENST00000307896.10	667	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACATGTGGCCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	152073443	152067599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152067810_152068091_152068222_152070107_152070319_152073339
ENSMUSG00000039759.11_3	chr4	-	424	3	FSM	ENSMUSG00000039759.11	ENST00000401022.2	432	3	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACATGTGGCCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	152073409	152067599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152067800_152068091_152068231_152073324
ENSMUSG00000039763.11_0	chr16	-	3355	2	FSM	ENSMUSG00000039763.11	ENSMUST00000049244.10	3368	2	6	7	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTGTTCTGTGGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	91415881	91411148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91414268_91415645
ENSMUSG00000039765.16_105	chr5	+	4637	32	ISM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	409	6	409	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTATAAAACTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43839039	43898302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039765.16_4	chr5	+	4776	34	FSM	ENSMUSG00000039765.16	ENST00000424120.6	4782	34	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTATAAAACTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43819715	43898302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43819767_43838630_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039765.16_46	chr5	+	4718	33	FSM	ENSMUSG00000039765.16	ENST00000506643.5	4731	33	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTATAAAACTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43838637	43898302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43883537_43883715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039765.16_67	chr5	+	4543	32	FSM	ENSMUSG00000039765.16	ENST00000674945.1	4554	32	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGTATAAAACTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	43838635	43898302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43838720_43839040_43839146_43840441_43840544_43841381_43841556_43842599_43842763_43845465_43845603_43846259_43846392_43852426_43852637_43853867_43853975_43857280_43857422_43860532_43860690_43861202_43861445_43863398_43863577_43864084_43864242_43866385_43866534_43867846_43867986_43869581_43869786_43871850_43871944_43873095_43873188_43875894_43876063_43877682_43877789_43879730_43879841_43881042_43881140_43881615_43881715_43887198_43887403_43889719_43889810_43891169_43891284_43892657_43892793_43893375_43893499_43894837_43894897_43896639_43896818_43898007
ENSMUSG00000039768.17_0	chr4	+	2124	15	FSM	ENSMUSG00000039768.17	ENST00000294401.11	2140	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATGGGTTTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	152018099	152065675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039768.17_6	chr4	+	3134	16	FSM	ENSMUSG00000039768.17	ENSMUST00000062904.11	3151	16	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAATCAGTCTGGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	152018157	152066587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152018282_152034850_152034981_152037298_152037373_152041559_152041662_152052955_152053085_152054302_152054426_152055313_152055388_152057936_152058127_152058216_152058303_152058653_152058771_152061406_152061563_152062455_152062526_152063728_152063787_152063900_152064044_152064374_152064505_152065159
ENSMUSG00000039770.7_0	chr17	+	3108	3	FSM	ENSMUSG00000039770.7	ENSMUST00000045174.7	3120	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73143455	73158186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73143787_73153273_73153439_73155574
ENSMUSG00000039770.7_3	chr17	+	2404	3	FSM	ENSMUSG00000039770.7	ENSMUST00000233210.2	2419	3	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTACAGAACTGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	73144322	73157432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73144704_73153273_73153439_73155574
ENSMUSG00000039771.14_0	chr5	+	623	4	FSM	ENSMUSG00000039771.14	ENSMUST00000041366.14	646	4	13	10	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATGGGGCTGTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	136145497	136151791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136145660_136148848_136148939_136150942_136151118_136151595
ENSMUSG00000039781.15_1	chr11	-	3572	26	NNC	ENSMUSG00000039781.15	novel	3581	26	NA	NA	7	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119977646	119955261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963946_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ENSMUSG00000039781.15_2	chr11	-	3572	26	FSM	ENSMUSG00000039781.15	ENSMUST00000106227.8	3578	26	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119977653	119955261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963953_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ENSMUSG00000039781.15_5	chr11	-	3552	26	FSM	ENSMUSG00000039781.15	ENSMUST00000180242.2	3581	26	23	6	23	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTTCATGTCACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	119977630	119955261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119955536_119955610_119955672_119956213_119956378_119956463_119956642_119956736_119956880_119957519_119957595_119957746_119957865_119957955_119958064_119958771_119958974_119959523_119959627_119961114_119961232_119961310_119961437_119961617_119961729_119962184_119962362_119962702_119962886_119963235_119963331_119963663_119963803_119963950_119964071_119964566_119964685_119966389_119966537_119966914_119967029_119967744_119967867_119968152_119968268_119972069_119972165_119974621_119974816_119977477
ENSMUSG00000039782.16_0	chr5	+	3079	10	FSM	ENSMUSG00000039782.16	ENST00000345451.8	3093	10	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTCCAAGTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	43390919	43443527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43392432_43394649_43394932_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_1	chr5	+	6621	10	FSM	ENSMUSG00000039782.16	ENST00000382401.8	6636	10	8	7	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCAGAGCTGTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	43390919	43447060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43392432_43394649_43394941_43401928_43402020_43419076_43419128_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039782.16_14	chr5	+	6644	11	FSM	ENSMUSG00000039782.16	ENST00000442003.6	6660	11	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCAGAGCTGTGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	43390920	43447060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43392432_43394649_43394941_43401928_43402020_43419076_43419128_43426211_43426236_43434773_43434945_43435946_43436037_43438452_43438572_43438713_43438829_43441279_43441462_43443061
ENSMUSG00000039787.14_0	chr2	+	2698	12	FSM	ENSMUSG00000039787.14	ENSMUST00000047521.7	2715	12	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTCACTTAACAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	29759514	29772844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29759738_29761034_29761146_29761286_29761405_29762574_29762710_29762819_29763025_29765616_29765737_29765999_29766077_29766172_29766280_29768015_29768149_29770624_29770753_29770926_29771131_29771707
ENSMUSG00000039789.8_0	chr16	-	5652	3	FSM	ENSMUSG00000039789.8	ENSMUST00000090522.5	5668	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTTTAAAATATATACTT	NA	NA	NA	NA	NA	NA	NA	NA	3690253	3679400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3684595_3689013_3689141_3689922
ENSMUSG00000039795.15_0	chr3	-	1596	8	FSM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCGAGACAATTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	10416375	10405024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569_10413613_10416301
ENSMUSG00000039795.15_1	chr3	-	1523	7	ISM	ENSMUSG00000039795.15	ENSMUST00000037839.12	1610	8	2764	12	1	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCGAGACAATTATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	10413613	10405024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_10405966_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10412224_10412265_10413569
ENSMUSG00000039795.15_8	chr3	-	668	5	ISM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	2324	7	2324	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGCAGAATCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	10411290	10405780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_10405958_10406053_10406210_10409860_10409983_10410994_10411087_10411169
ENSMUSG00000039795.15_9	chr3	-	720	6	FSM	ENSMUSG00000039795.15	ENST00000521895.5	727	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCAGCAGAATCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	10413614	10405780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_10405958_10406053_10406210_10409860_10409983_10410994_10411087_10411169_10411298_10413569
ENSMUSG00000039798.3_0	chr2	-	1378	2	FSM	ENSMUSG00000039798.3	ENSMUST00000047607.3	1406	2	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTCCCAAATAAGACCTA	NA	NA	NA	NA	NA	NA	NA	NA	29760312	29758745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29759383_29759571
ENSMUSG00000039801.8_0	chr15	+	10456	53	FSM	ENSMUSG00000039801.8	ENSMUST00000110617.2	10469	53	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTGCCCACAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	8198601	8300641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_8198974_8199789_8199879_8201176_8201306_8204209_8204346_8204440_8204561_8205602_8205836_8207820_8207928_8209241_8209399_8210362_8210467_8211599_8211783_8215566_8215817_8215982_8216136_8216307_8217063_8217870_8218080_8218280_8218362_8223807_8223973_8228664_8228824_8230617_8230847_8231677_8231818_8232744_8232963_8233156_8233322_8239445_8239585_8241852_8241963_8242112_8242272_8243190_8243300_8245791_8246084_8247906_8248880_8250341_8250452_8251266_8251434_8251820_8251892_8252554_8252635_8256396_8256578_8256769_8257052_8258073_8258815_8259698_8259854_8260595_8260726_8261529_8261585_8263247_8263353_8271753_8271826_8273286_8273397_8273704_8273898_8274092_8274246_8276389_8276740_8280460_8280549_8281632_8281798_8287797_8287829_8289217_8289350_8290003_8290170_8291810_8291870_8292411_8292565_8293812_8293926_8299102_8299282_8300162
ENSMUSG00000039804.16_0	chr2	-	3149	8	FSM	ENSMUSG00000039804.16	ENSMUST00000040381.15	3179	8	19	11	19	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCAGACCTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	164876768	164842287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164844092_164844558_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ENSMUSG00000039804.16_1	chr2	-	3099	8	FSM	ENSMUSG00000039804.16	ENSMUST00000122070.2	3117	8	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAATGAAAAAGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	164876705	164842297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164844092_164844535_164844880_164846016_164846217_164851242_164851370_164852370_164852508_164854755_164855083_164865065_164865133_164876602
ENSMUSG00000039810.12_0	chr10	-	3710	3	FSM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTGTTAGGAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	128383635	128377834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128381408_128382696_128382761_128383562
ENSMUSG00000039810.12_1	chr10	-	3639	2	ISM	ENSMUSG00000039810.12	ENSMUST00000040572.10	3721	3	881	3	881	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTGTTAGGAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	128382762	128377834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128381408_128382696
ENSMUSG00000039813.15_0	chr4	-	4303	13	FSM	ENSMUSG00000039813.15	ENSMUST00000084621.12	4315	13	0	12	0	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAAACGATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46650209	46604401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46605969_46606382_46606505_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ENSMUSG00000039813.15_1	chr4	-	2671	13	FSM	ENSMUSG00000039813.15	ENST00000375066.6	2686	13	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGATAGAGTTCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	46649928	46605719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_46605969_46606382_46606472_46606969_46607156_46608982_46609104_46613947_46614425_46615026_46615209_46616253_46616365_46620446_46620822_46628340_46628538_46629875_46630010_46637588_46637737_46646116_46646259_46649668
ENSMUSG00000039814.16_0	chr8	-	2827	7	FSM	ENSMUSG00000039814.16	ENSMUST00000095438.10	2838	7	8	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCATTAGTGTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	19000983	18982747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_18984622_18987242_18987355_18989083_18989254_18990628_18990839_18991960_18992146_18998574_18998759_19000891
ENSMUSG00000039824.5_0	chr10	-	526	5	FSM	ENSMUSG00000039824.5	ENST00000552568.5	543	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGTGAGGGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	128333276	128330464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128330537_128331021_128331097_128332121_128332266_128332482_128332511_128333069
ENSMUSG00000039826.14_0	chr2	-	3396	8	FSM	ENSMUSG00000039826.14	ENSMUST00000048044.12	3408	8	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCATGTGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29678503	29666122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29667969_29668743_29668881_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039826.14_2	chr2	-	740	7	FSM	ENSMUSG00000039826.14	ENSMUST00000177467.8	744	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGCGGAACTGCAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	29677630	29667768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29667969_29669834_29669908_29672131_29672214_29673323_29673386_29674964_29675040_29676487_29676620_29677514
ENSMUSG00000039828.8_0	chr15	-	2122	18	FSM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACAGATTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8128673	7902544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039828.8_1	chr15	-	2052	17	ISM	ENSMUSG00000039828.8	ENSMUST00000045766.8	2126	18	169	2	169	-2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACAGATTTTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	8128506	7902544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_7902735_7913761_7913925_7915043_7915161_7916809_7916890_7918556_7918658_7949967_7950107_7951549_7951635_7953688_7953789_8006448_8006624_8049069_8049147_8065211_8065366_8072191_8072326_8075912_8075973_8108643_8108849_8111945_8112067_8123159_8123244_8128439
ENSMUSG00000039828.8_5	chr15	-	1117	4	FSM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTAAAATGGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	8128691	8121721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_8122600_8123159_8123244_8128439_8128506_8128602
ENSMUSG00000039828.8_6	chr15	-	1030	3	ISM	ENSMUSG00000039828.8	ENSMUST00000227371.2	1130	4	186	11	168	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTAAAATGGTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	8128507	8121721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_8122600_8123159_8123244_8128439
ENSMUSG00000039831.17_0	chr3	+	5779	23	FSM	ENSMUSG00000039831.17	ENSMUST00000037958.14	5787	23	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCCACCATCTCCACTA	NA	NA	NA	NA	NA	NA	NA	NA	121746883	121810400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_121747054_121767527_121767765_121775463_121775599_121782137_121782235_121782560_121782634_121783957_121784007_121784633_121784772_121785510_121785576_121785982_121786094_121786181_121786263_121786390_121786580_121787228_121787367_121796190_121796352_121796857_121796998_121797893_121797999_121799303_121799403_121800424_121800565_121801192_121801382_121801602_121801741_121803474_121803708_121804898_121805230_121805713_121805823_121807749
ENSMUSG00000039834.18_0	chr2	-	4565	28	FSM	ENSMUSG00000039834.18	ENSMUST00000041361.14	4587	28	20	2	20	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCTTTGTATATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	164753657	164733803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164734212_164734299_164734382_164734460_164734527_164734606_164734691_164734797_164734873_164735165_164735270_164735392_164735536_164735620_164735764_164736444_164736820_164736897_164737010_164737907_164738168_164739908_164740004_164740103_164740198_164741176_164741407_164741790_164741952_164742030_164742108_164742197_164742315_164742420_164742440_164743337_164743451_164744127_164744306_164744415_164744657_164746760_164746908_164749347_164749495_164749572_164749879_164750074_164750153_164751125_164751364_164752541_164752793_164753436
ENSMUSG00000039835.17_0	chr10	+	7300	7	FSM	ENSMUSG00000039835.17	ENSMUST00000037341.14	7321	7	13	8	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAAACTTCTTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	18283435	18409632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_18284263_18348666_18348820_18373780_18373906_18387297_18387491_18399538_18402791_18403283_18403417_18407015
ENSMUSG00000039835.17_1	chr10	+	6781	8	FSM	ENSMUSG00000039835.17	ENSMUST00000100054.4	6795	8	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTTGAAACTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18345734	18409629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_18345914_18348666_18348820_18373780_18373906_18387297_18387491_18391776_18391909_18399538_18402791_18403283_18403417_18407015
ENSMUSG00000039841.15_0	chr6	-	4283	6	FSM	ENSMUSG00000039841.15	ENSMUST00000115320.8	4311	6	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAAGGTGTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	28261890	28239933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_28241657_28242975_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261376
ENSMUSG00000039841.15_1	chr6	-	2063	5	FSM	ENSMUSG00000039841.15	ENST00000619291.4	2079	5	13	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAAAAACCAGGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	28261900	28243564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_28244663_28247139_28247284_28256429_28256526_28260716_28260836_28261294
ENSMUSG00000039842.16_0	chr8	+	4642	14	FSM	ENSMUSG00000039842.16	ENSMUST00000039412.15	4662	14	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAGAGAAGCAATAATT	NA	NA	NA	NA	NA	NA	NA	NA	18645160	18853199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531_18682660_18691580_18691682_18718961_18719000_18721107_18721271_18738997_18739076_18838254_18838493_18851421
ENSMUSG00000039842.16_1	chr8	+	2067	8	FSM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTGACCTGTATACC	NA	NA	NA	NA	NA	NA	NA	NA	18645597	18682917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_18645652_18646938_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
ENSMUSG00000039842.16_2	chr8	+	1997	7	ISM	ENSMUSG00000039842.16	ENSMUST00000146819.8	2067	8	1357	0	1357	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTTGACCTGTATACC	NA	NA	NA	NA	NA	NA	NA	NA	18646954	18682917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_18647031_18657294_18657414_18672622_18672711_18675575_18675691_18677133_18677257_18679561_18679652_18681531
ENSMUSG00000039844.21_0	chr2	+	6229	26	FSM	ENSMUSG00000039844.21	ENSMUST00000095087.11	6241	26	1	11	1	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAAAGCCCATCTGATGC	NA	NA	NA	NA	NA	NA	NA	NA	29509732	29630354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164_29600321_29609604_29609863_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ENSMUSG00000039844.21_11	chr2	+	6385	24	FSM	ENSMUSG00000039844.21	ENSMUST00000102872.11	6402	24	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAGTCAATATAGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	29509787	29630979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29510076_29569144_29569282_29569748_29569863_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ENSMUSG00000039844.21_6	chr2	+	6200	26	FSM	ENSMUSG00000039844.21	ENSMUST00000091146.12	6212	26	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCATGTCTGTGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	29509759	29630370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29510076_29569144_29569282_29576116_29576296_29579118_29579276_29589008_29589098_29589697_29589851_29590197_29590319_29590679_29590864_29592204_29592691_29597209_29597413_29600164_29600321_29609604_29609863_29610654_29610751_29612235_29612322_29614784_29614897_29616217_29616294_29620539_29620625_29622838_29622932_29623588_29623775_29624211_29624297_29624436_29624532_29625813_29625893_29625995_29626098_29626583_29626682_29627338_29627468_29627931
ENSMUSG00000039849.7_0	chr2	+	5763	17	FSM	ENSMUSG00000039849.7	ENSMUST00000041643.5	5780	17	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAAATGAGTGGCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	164721286	164736367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164721410_164724694_164724865_164725996_164726140_164726224_164726350_164727278_164727417_164727595_164727724_164727827_164727983_164728414_164728563_164728643_164728728_164728978_164729079_164730270_164730434_164731013_164731187_164731305_164731393_164731473_164731659_164732334_164732429_164732518_164732695_164732796
ENSMUSG00000039850.17_0	chr11	+	5053	9	FSM	ENSMUSG00000039850.17	ENSMUST00000106244.9	5070	9	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATCTTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119382175	119402235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119382286_119382610_119382783_119390352_119390488_119390671_119390712_119391416_119391530_119393118_119393188_119393524_119393654_119395916_119395994_119398027
ENSMUSG00000039850.17_2	chr11	+	513	5	FSM	ENSMUSG00000039850.17	ENST00000323854.9	525	5	9	3	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTATGGGGCTGTGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	119382618	119393651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119382783_119390671_119390712_119391416_119391530_119393118_119393188_119393524
ENSMUSG00000039850.17_3	chr11	+	465	4	FSM	ENSMUSG00000039850.17	ENST00000520284.5	484	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGGTATGGGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119382621	119393646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119382783_119391416_119391530_119393118_119393188_119393524
ENSMUSG00000039851.12_0	chr16	-	1074	2	FSM	ENSMUSG00000039851.12	ENST00000479548.2	1086	2	12	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTTCAATGCCAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	90866026	90852282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90853246_90865915
ENSMUSG00000039852.18_1	chr4	+	7710	23	FSM	ENSMUSG00000039852.18	ENSMUST00000105682.9	7728	23	9	9	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACAGCACCCTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	150366111	150706414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150366533_150490652_150491122_150515979_150516051_150523799_150523926_150553151_150553258_150554751_150554849_150561820_150561926_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ENSMUSG00000039852.18_6	chr4	+	6478	17	FSM	ENSMUSG00000039852.18	ENSMUST00000105680.9	6503	17	18	7	18	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTACAGCACCCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	150572867	150706412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150573033_150584459_150584509_150593286_150593412_150594395_150594496_150619303_150619403_150654672_150654754_150695310_150695474_150696443_150696537_150697003_150697204_150698181_150698344_150698596_150698711_150698933_150700289_150700397_150700621_150701215_150701937_150702862_150703010_150703481_150703663_150703912
ENSMUSG00000039865.9_0	chr3	-	1690	12	ISM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	4995	5	4995	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACCCAGGGTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121320841	121254768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712
ENSMUSG00000039865.9_1	chr3	-	1731	13	FSM	ENSMUSG00000039865.9	ENST00000446120.6	1736	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACCCAGGGTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	121325836	121254768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_121254988_121257062_121257201_121279910_121279998_121283846_121284004_121291367_121291534_121303022_121303210_121303840_121303966_121305970_121306061_121307305_121307467_121318475_121318570_121319315_121319453_121320712_121320856_121325809
ENSMUSG00000039873.5_0	chr2	-	1002	2	FSM	ENSMUSG00000039873.5	ENSMUST00000042775.5	1014	2	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATTGGAGGGTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	164675365	164672652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164672908_164674618
ENSMUSG00000039879.10_0	chr10	-	5071	4	FSM	ENSMUSG00000039879.10	ENSMUST00000037879.8	5098	4	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATATTAAACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	17823802	17774796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_17778126_17783781_17783937_17790739_17791781_17823256
ENSMUSG00000039883.6_0	chr5	+	2128	4	FSM	ENSMUSG00000039883.6	ENSMUST00000035651.6	2154	4	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAGTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21748570	21780886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21748718_21765397_21766298_21775217_21775374_21779961
ENSMUSG00000039886.9_0	chr5	-	1539	12	FSM	ENSMUSG00000039886.9	ENSMUST00000043378.9	1559	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGATATCTGATGGACT	NA	NA	NA	NA	NA	NA	NA	NA	135773291	135764347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135764660_135764750_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765517_135765599_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039886.9_5	chr5	-	1346	10	FSM	ENSMUSG00000039886.9	ENST00000417509.5	1352	10	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCAGCTTGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135772977	135764400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134_135771254_135772901
ENSMUSG00000039886.9_6	chr5	-	1272	9	ISM	ENSMUSG00000039886.9	ENST00000417509.5	1352	10	1728	0	1728	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCAGCTTGCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	135771255	135764400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_135764820_135764923_135764989_135765107_135765201_135765294_135765357_135765450_135765690_135765771_135765868_135766043_135766104_135770819_135770937_135771134
ENSMUSG00000039887.12_0	chr3	+	2029	4	FSM	ENSMUSG00000039887.12	ENSMUST00000039442.12	2037	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCAGGTATTTTAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	121085429	121156743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_121085633_121092252_121092408_121113728_121113861_121155204
ENSMUSG00000039899.6_0	chr5	+	3767	2	FSM	ENSMUSG00000039899.6	ENSMUST00000035799.6	3788	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTATCCTTCGATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	21577653	21583365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21578307_21580251
ENSMUSG00000039901.11_0	chr19	-	3672	26	FSM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45986923	45805802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038_45967152_45986854
ENSMUSG00000039901.11_1	chr19	-	3598	25	ISM	ENSMUSG00000039901.11	ENSMUST00000045396.9	3676	26	19781	0	19781	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTCGTTAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	45967146	45805802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_45807418_45808712_45808830_45834546_45834626_45874390_45874467_45879646_45879774_45880504_45880588_45910055_45910145_45920789_45920851_45922224_45922295_45924800_45924867_45928883_45928943_45934440_45934543_45939100_45939195_45941063_45941140_45941862_45941910_45945118_45945180_45946845_45946890_45948751_45948809_45953602_45953690_45953800_45953876_45954680_45954774_45961261_45961370_45963405_45963553_45963657_45963715_45967038
ENSMUSG00000039903.19_1	chr16	+	2124	8	FSM	ENSMUSG00000039903.19	ENSMUST00000037539.15	2142	8	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAGTTCACTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	90627764	90701773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUSG00000039903.19_2	chr16	+	1681	6	FSM	ENSMUSG00000039903.19	ENSMUST00000231280.2	1692	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAAGTTCACTCCACAG	NA	NA	NA	NA	NA	NA	NA	NA	90627886	90701773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90628321_90672926_90673080_90687417_90687562_90691465_90691544_90694251_90694342_90700991
ENSMUSG00000039903.19_3	chr16	+	1540	7	FSM	ENSMUSG00000039903.19	ENSMUST00000099543.10	1554	7	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCTATCTGTACATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	90628012	90701581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90628321_90663142_90663340_90666453_90666578_90672926_90673080_90691465_90691544_90694251_90694342_90700991
ENSMUSG00000039903.19_4	chr16	+	418	3	FSM	ENSMUSG00000039903.19	ENST00000514073.1	442	3	15	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGGTAATTTCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	90663146	90691537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90663340_90672926_90673080_90691465
ENSMUSG00000039903.19_6	chr16	+	260	2	FSM	ENSMUSG00000039903.19	ENST00000493276.1	278	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACGGTAATTTCTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	90663151	90691537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90663340_90691465
ENSMUSG00000039908.15_0	chr11	+	2690	17	FSM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGATGTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119246384	119271902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119246462_119247633_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ENSMUSG00000039908.15_1	chr11	+	2614	16	ISM	ENSMUSG00000039908.15	ENSMUST00000050880.8	2695	17	1250	3	1250	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGGATGTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119247632	119271902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_119247860_119248803_119248997_119250122_119250209_119253042_119253123_119254225_119254369_119259489_119259666_119260018_119260092_119261574_119261626_119263936_119263998_119265310_119265367_119265590_119265732_119267607_119267736_119267994_119268095_119268519_119268654_119270684_119270758_119271010
ENSMUSG00000039910.11_0	chr10	+	1963	2	FSM	ENSMUSG00000039910.11	ENSMUST00000038107.9	1979	2	8	8	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCAGTCATTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	17598973	17601414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_17599208_17599685
ENSMUSG00000039910.11_1	chr10	+	1699	1	FSM	ENSMUSG00000039910.11	ENSMUST00000219558.2	2411	1	705	7	428	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAGTTAAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	17599685	17601384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_17599700_17601400
ENSMUSG00000039910.11_2	chr10	+	1794	2	FSM	ENSMUSG00000039910.11	ENST00000536159.2	1817	2	6	17	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGTTAAGAAATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	17599263	17601386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_17599357_17599685
ENSMUSG00000039911.14_0	chr4	-	3073	3	FSM	ENSMUSG00000039911.14	ENSMUST00000038562.9	3092	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATGAAACCATCCGAG	NA	NA	NA	NA	NA	NA	NA	NA	150039492	149980750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149982799_149990872_149991715_150039309
ENSMUSG00000039914.7_0	chr10	-	1292	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220027.2	1307	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGTGAATTTGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	128204551	128198974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204387
ENSMUSG00000039914.7_1	chr10	-	1425	5	FSM	ENSMUSG00000039914.7	ENSMUST00000220227.2	1434	5	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTGAATTTGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	128204862	128198973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128199661_128200273_128200376_128200891_128201085_128203875_128204023_128204566
ENSMUSG00000039917.11_0	chr5	+	4198	4	FSM	ENSMUSG00000039917.11	ENSMUST00000043707.7	4207	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGCTCAGTGAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	135661478	135675228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135661773_135664848_135665257_135667943_135668095_135671883
ENSMUSG00000039934.13_0	chr5	+	3729	31	FSM	ENSMUSG00000039934.13	ENSMUST00000036031.13	3745	31	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTTAATTTGTATTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	21391295	21496714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21391458_21399397_21399475_21401042_21401100_21412238_21412309_21412585_21412640_21422387_21422477_21426223_21426294_21427387_21427438_21431241_21431347_21431771_21431832_21433021_21433066_21434158_21434245_21447802_21447881_21451896_21451999_21455738_21455832_21455936_21456155_21458367_21458438_21458956_21459040_21462867_21462922_21474899_21475029_21475553_21475613_21476214_21476247_21477979_21478042_21483042_21483139_21485993_21486065_21486505_21486601_21492674_21492795_21493585_21493648_21494786_21494889_21495042_21495143_21495535
ENSMUSG00000039934.13_12	chr5	+	568	6	ISM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	3463	6	3463	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGTGGACGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	21486504	21495623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_21486601_21492674_21492795_21493585_21493648_21494786_21494889_21495042_21495143_21495535
ENSMUSG00000039934.13_5	chr5	+	657	7	FSM	ENSMUSG00000039934.13	ENST00000441833.6	670	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGTGGACGTGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	21483048	21495623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21483139_21486505_21486601_21492674_21492795_21493585_21493648_21494786_21494889_21495042_21495143_21495535
ENSMUSG00000039942.16_0	chr15	-	3304	3	FSM	ENSMUSG00000039942.16	ENSMUST00000120563.2	3312	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTTCCATAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5273652	5262886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_5264704_5271741_5272677_5273100
ENSMUSG00000039942.16_1	chr15	-	3221	3	FSM	ENSMUSG00000039942.16	ENSMUST00000047379.15	3264	3	36	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTTCCATAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5273632	5262886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_5264704_5271741_5272677_5273163
ENSMUSG00000039943.17_10	chr2	+	5226	38	FSM	ENSMUSG00000039943.17	ENST00000378473.9	5243	38	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCTACATACAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	135719311	135856655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135852855_135852893_135854885_135855172_135855253
ENSMUSG00000039943.17_3	chr2	+	3924	37	FSM	ENSMUSG00000039943.17	ENST00000414679.6	3933	37	6	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGCTGCTGCAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	135719308	135855387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135806971_135807008_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135854885_135855172_135855253
ENSMUSG00000039943.17_5	chr2	+	5154	36	FSM	ENSMUSG00000039943.17	ENST00000278655.8	5170	36	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTCTACATACAGAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	135719310	135856655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_135719402_135749418_135749500_135750269_135750330_135752020_135752165_135771874_135771955_135774168_135774223_135780179_135780262_135781129_135781231_135781866_135781925_135788965_135789075_135792131_135792343_135793912_135794007_135796265_135796346_135796834_135796920_135799974_135800066_135800561_135800658_135803638_135803740_135808944_135809087_135809836_135809922_135810240_135810366_135812313_135812366_135813677_135813781_135814831_135814997_135818018_135818224_135823952_135824042_135824895_135825047_135829399_135829450_135829756_135829823_135836213_135836330_135840596_135840673_135842053_135842230_135844478_135844581_135849259_135849318_135849742_135849830_135854885_135855172_135855253
ENSMUSG00000039952.16_0	chr9	-	5646	4	FSM	ENSMUSG00000039952.16	ENSMUST00000191899.6	5662	4	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTATAACTGGGAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	108141150	108081841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140978
ENSMUSG00000039952.16_1	chr9	-	5620	3	FSM	ENSMUSG00000039952.16	ENST00000539901.5	5636	3	9	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAATGTCATTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108141112	108082071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108086861_108095211_108095610_108140679
ENSMUSG00000039952.16_2	chr9	-	4340	4	FSM	ENSMUSG00000039952.16	ENSMUST00000080435.9	4364	4	10	14	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	108141004	108083156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140823
ENSMUSG00000039952.16_3	chr9	-	4235	3	FSM	ENSMUSG00000039952.16	ENSMUST00000166905.8	4244	3	6	3	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	108141111	108083156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108086861_108095211_108095610_108140978
ENSMUSG00000039952.16_4	chr9	-	4411	4	FSM	ENSMUSG00000039952.16	ENSMUST00000171412.7	4415	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAGATTAA	NA	NA	NA	NA	NA	NA	NA	NA	108140931	108083156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108086861_108095211_108095610_108130299_108130357_108140679
ENSMUSG00000039953.14_0	chr4	+	4439	18	FSM	ENSMUSG00000039953.14	ENSMUST00000105691.8	4459	18	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCAGCCTGAGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	149670937	149733349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149671230_149698506_149698630_149711668_149711865_149713759_149713969_149716184_149716335_149716445_149716632_149719127_149719377_149719690_149719813_149722689_149722853_149726114_149726172_149727651_149727810_149728037_149728187_149728428_149728656_149729326_149729498_149729778_149729925_149730697_149730834_149731222_149731408_149731829
ENSMUSG00000039958.18_3	chr6	+	725	2	FSM	ENSMUSG00000039958.18	ENST00000538391.1	740	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCAGTGGCTTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	149045653	149052277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149045941_149051839
ENSMUSG00000039959.14_0	chr5	-	7829	31	FSM	ENSMUSG00000039959.14	ENSMUST00000060311.12	7835	31	2	4	2	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCTGGTGATAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	135573967	135435388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460137_135460282_135460499_135460602_135461903_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260_135489325_135573790
ENSMUSG00000039959.14_12	chr5	-	3042	30	FSM	ENSMUSG00000039959.14	ENST00000616821.4	3045	30	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTGTGACACTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	135489326	135440028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460133_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953_135487097_135489260
ENSMUSG00000039959.14_14	chr5	-	2972	29	ISM	ENSMUSG00000039959.14	ENST00000616821.4	3045	30	2234	3	2234	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTCTGTGACACTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	135487092	135440028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_135440124_135441464_135441574_135443103_135443166_135445823_135445948_135449077_135449184_135450974_135451076_135453395_135453490_135453718_135453778_135455174_135455286_135457353_135457491_135457570_135457679_135458027_135458115_135459044_135459181_135460133_135460282_135460499_135460602_135461879_135461997_135463094_135463184_135463860_135464045_135465290_135465364_135467388_135467487_135468875_135469017_135469102_135469179_135473588_135473647_135478537_135478679_135480427_135480490_135481653_135481731_135483918_135484000_135485892_135485950_135486953
ENSMUSG00000039960.6_0	chr8	+	3360	3	FSM	ENSMUSG00000039960.6	ENSMUST00000045487.4	3371	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGAGCTGCTCTTGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	124380672	124390617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124380956_124382230_124382290_124387599
ENSMUSG00000039967.15_0	chr4	-	9909	8	FSM	ENSMUSG00000039967.15	ENSMUST00000098163.9	9941	8	27	5	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGAATAATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34882903	34803117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826881_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ENSMUSG00000039967.15_1	chr4	-	9978	8	FSM	ENSMUSG00000039967.15	ENSMUST00000047950.6	9986	8	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGAATAATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34882957	34803117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34812044_34816273_34816416_34819463_34819601_34826692_34826896_34839331_34839468_34839568_34839648_34839831_34839987_34882757
ENSMUSG00000039968.10_0	chr5	-	5538	8	FSM	ENSMUSG00000039968.10	ENSMUST00000036489.10	5550	8	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCACAATCTTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	21156814	21098031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21101703_21101790_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ENSMUSG00000039968.10_2	chr5	-	7642	7	FSM	ENSMUSG00000039968.10	ENSMUST00000196780.5	7651	7	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACATACTGACAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	21161394	21100595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21101900_21107285_21107454_21110777_21110921_21113104_21113243_21124522_21125161_21132617_21132729_21156254
ENSMUSG00000039976.5_0	chr11	-	1137	7	FSM	ENSMUSG00000039976.5	ENST00000576768.5	1156	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGAAAAGCCCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	119047607	119038400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119038643_119039756_119039904_119041853_119042034_119044714_119044902_119045907_119046043_119046845_119046953_119047468
ENSMUSG00000039977.17_0	chr9	-	234	2	FSM	ENSMUSG00000039977.17	ENST00000527307.2	244	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGTACTGAGCACACAT	NA	NA	NA	NA	NA	NA	NA	NA	15538014	15523285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15523451_15537945
ENSMUSG00000039977.17_1	chr9	-	159	1	ISM	ENSMUSG00000039977.17	ENSMUST00000115592.8	2918	11	14583	52126	14572	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGTACTGAGCACACAT	NA	NA	NA	NA	NA	NA	NA	NA	15523444	15523285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_15523300_15523400
ENSMUSG00000039982.9_0	chr19	-	5200	9	FSM	ENSMUSG00000039982.9	ENSMUST00000045521.9	5226	9	18	8	18	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAACAAGCACAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	12478800	12443709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_12447074_12450593_12450684_12455489_12455652_12459437_12459591_12460409_12460472_12462627_12462790_12463792_12463855_12469199_12469915_12478370
ENSMUSG00000039983.14_0	chr2	-	517	3	FSM	ENSMUSG00000039983.14	ENST00000558113.5	532	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTAGGACGGGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	118857858	118830169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118830290_118852549_118852707_118857618
ENSMUSG00000039983.14_1	chr2	-	1849	4	FSM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	3	18	3	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAATAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	118859871	118848277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118849646_118852549_118852707_118857618_118857869_118859797
ENSMUSG00000039983.14_2	chr2	-	1777	3	ISM	ENSMUSG00000039983.14	ENSMUST00000036470.14	1870	4	2004	18	-3	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAATAAAAATAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	118857870	118848277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_118849646_118852549_118852707_118857618
ENSMUSG00000039985.15_0	chr6	-	2689	6	FSM	ENSMUSG00000039985.15	ENSMUST00000054080.15	2697	6	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTCTCTGGTAAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	148847958	148822533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148847789
ENSMUSG00000039985.15_3	chr6	-	2412	5	FSM	ENSMUSG00000039985.15	ENSMUST00000203164.3	2442	5	15	15	15	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAAAAATAAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	148834632	148822569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148824529_148827510_148827604_148830006_148830134_148832048_148832149_148834499
ENSMUSG00000039985.15_4	chr6	-	2762	7	FSM	ENSMUSG00000039985.15	ENSMUST00000204435.3	2785	7	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAAAAATAAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	148845025	148822569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148839237_148839318_148844827
ENSMUSG00000039985.15_5	chr6	-	2711	6	FSM	ENSMUSG00000039985.15	ENSMUST00000081956.12	2737	6	11	15	-3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGAAAAATAAAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	148846313	148822569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148824529_148827510_148827662_148830006_148830134_148832048_148832149_148834499_148834647_148846086
ENSMUSG00000039987.16_1	chr5	-	4823	18	FSM	ENSMUSG00000039987.16	ENSMUST00000118174.8	4840	18	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTACCTCAGCACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	21087112	20963667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20970755_20970912_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119_21060200_21086953
ENSMUSG00000039987.16_3	chr5	-	4319	15	ISM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	41903	10	41903	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTGACTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21018294	20963776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237
ENSMUSG00000039987.16_4	chr5	-	4394	16	FSM	ENSMUSG00000039987.16	ENST00000275575.11	4407	16	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTGACTTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21060194	20963776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_20966074_20966661_20966788_20969211_20969308_20977172_20977260_20978682_20978815_20979000_20979274_20980876_20981006_20987270_20987490_20994626_20994783_20999292_20999480_21006899_21007065_21008182_21008349_21010652_21010812_21012401_21012472_21018237_21018295_21060119
ENSMUSG00000039988.15_0	chr3	+	3885	13	FSM	ENSMUSG00000039988.15	ENSMUST00000040787.13	3903	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTCATGATGTGCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	157653062	157713665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_157653594_157666620_157666663_157667914_157668020_157677868_157677955_157678636_157678683_157680864_157680932_157694276_157694422_157697317_157697450_157700233_157700396_157705293_157705374_157706710_157706810_157709345_157709447_157711376
ENSMUSG00000039989.8_1	chr11	-	5167	5	FSM	ENSMUSG00000039989.8	ENSMUST00000026665.8	5179	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGATTTCTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	118977042	118968405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118973128_118973342_118973410_118975388_118975455_118976582_118976627_118976774
ENSMUSG00000039989.8_3	chr11	-	734	5	FSM	ENSMUSG00000039989.8	ENST00000448310.1	745	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGGAGCTGCAGCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	118976997	118972777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_118973128_118973342_118973394_118975388_118975455_118976582_118976627_118976774
ENSMUSG00000039990.17_0	chr7	+	5382	25	FSM	ENSMUSG00000039990.17	ENSMUST00000051169.13	5424	25	33	9	33	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTCAAATATGTTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	133239304	133274691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133248718_133248821_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ENSMUSG00000039990.17_5	chr7	+	4371	24	FSM	ENSMUSG00000039990.17	ENSMUST00000128901.9	4380	24	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATACCTTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	133239422	133273900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_133239653_133240635_133240845_133242408_133242476_133243022_133243149_133245376_133245502_133245721_133245879_133249073_133249196_133249914_133250027_133252006_133252155_133252229_133252339_133252752_133252865_133253661_133253923_133255615_133255688_133255985_133256137_133258223_133258413_133258696_133258898_133260154_133260374_133261799_133262024_133263511_133263671_133263809_133263960_133265089_133265244_133267596_133267713_133269268_133269421_133273094
ENSMUSG00000039994.16_0	chr10	+	4439	29	FSM	ENSMUSG00000039994.16	ENSMUST00000055539.11	4457	29	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAGAGACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	128067941	128088800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUSG00000039994.16_11	chr10	+	4387	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105245.3	4402	29	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAAAAAGAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	128073934	128088795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128073991_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUSG00000039994.16_14	chr10	+	4338	28	ISM	ENSMUSG00000039994.16	ENSMUST00000105245.3	4402	29	1767	9	1767	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGAGACTTTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	128075701	128088801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUSG00000039994.16_8	chr10	+	4330	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105244.8	4341	29	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGGAGAGGAAAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	128067961	128088714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086153_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088063
ENSMUSG00000039994.16_9	chr10	+	4372	29	FSM	ENSMUSG00000039994.16	ENSMUST00000105242.8	4385	29	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAAAGAGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	128068002	128088797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128068045_128075702_128075867_128076006_128076161_128076248_128076364_128076458_128076522_128077143_128077246_128077452_128077609_128078178_128078313_128078499_128078588_128079063_128079241_128079938_128080157_128080306_128080411_128080528_128080699_128081954_128082081_128082177_128082330_128083021_128083120_128083208_128083327_128083444_128083647_128084230_128084377_128085215_128085302_128085389_128085511_128085596_128085680_128085836_128085980_128086156_128086332_128086414_128086484_128086562_128086682_128087538_128087753_128087861_128087958_128088060
ENSMUSG00000039997.17_0	chr1	-	3444	7	FSM	ENSMUSG00000039997.17	ENSMUST00000081216.12	3610	7	166	0	166	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATCTGTGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	173769860	173747972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173750171_173751514_173751704_173754371_173754789_173762575_173762744_173764083_173764206_173765307_173765593_173769795
ENSMUSG00000039997.17_1	chr1	-	3482	8	FSM	ENSMUSG00000039997.17	ENSMUST00000123708.8	3482	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAATCTGTGTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	173770058	173747972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173750171_173751514_173751704_173754371_173754789_173762575_173762744_173764083_173764206_173765307_173765593_173769795_173769861_173770020
ENSMUSG00000039997.17_4	chr1	-	3374	6	ISM	ENSMUSG00000039997.17	ENSMUST00000081216.12	3610	7	4432	7	4432	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCTATAAAAATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	173765594	173747979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_173750171_173751514_173751704_173754371_173754789_173762575_173762744_173764083_173764206_173765307
ENSMUSG00000039997.17_7	chr1	-	3012	9	ISM	ENSMUSG00000039997.17	ENSMUST00000129829.8	3054	10	202	0	171	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAAGCTGGAGAATACA	NA	NA	NA	NA	NA	NA	NA	NA	173769855	173749785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_173750171_173751514_173751704_173754371_173754789_173755840_173757083_173761348_173761493_173762575_173762744_173764083_173764206_173765307_173765593_173769795
ENSMUSG00000039997.17_8	chr1	-	3051	10	FSM	ENSMUSG00000039997.17	ENSMUST00000129829.8	3054	10	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACATAAAGCTGGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	173770057	173749788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173750171_173751514_173751704_173754371_173754789_173755840_173757083_173761348_173761493_173762575_173762744_173764083_173764206_173765307_173765593_173769795_173769861_173770020
ENSMUSG00000039997.17_9	chr1	-	2948	8	ISM	ENSMUSG00000039997.17	ENSMUST00000129829.8	3054	10	4463	6	4432	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTTACATAAAGCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	173765594	173749791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_173750171_173751514_173751704_173754371_173754789_173755840_173757083_173761348_173761493_173762575_173762744_173764083_173764206_173765307
ENSMUSG00000040003.19_0	chr5	+	5100	19	FSM	ENSMUSG00000040003.19	ENST00000637441.1	5116	19	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAATATATATCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	20270559	20909749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_20270670_20400018_20400232_20420316_20420528_20433369_20433450_20563911_20563970_20594067_20594190_20596276_20596460_20670573_20671213_20733286_20733319_20739334_20739525_20755204_20755297_20766151_20766345_20774103_20774353_20807344_20807520_20814261_20814458_20816042_20816187_20856052_20856192_20907067_20907121_20907728
ENSMUSG00000040006.14_0	chr10	-	1539	8	FSM	ENSMUSG00000040006.14	ENSMUST00000039763.14	1557	8	9	9	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7656672	7643719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7644350_7646120_7646285_7649061_7649193_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUSG00000040006.14_3	chr10	-	1514	8	FSM	ENSMUSG00000040006.14	ENSMUST00000124838.2	1525	8	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGAATTGCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	7656644	7643719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7644350_7646120_7646285_7649061_7649196_7649711_7649869_7650981_7651134_7653537_7653635_7655066_7655127_7656524
ENSMUSG00000040007.9_0	chr2	+	4514	7	FSM	ENSMUSG00000040007.9	ENST00000561234.5	4534	7	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGAAAAGAGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	118730692	118754999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118730928_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ENSMUSG00000040007.9_3	chr2	+	4576	7	FSM	ENSMUSG00000040007.9	ENSMUST00000036578.7	4594	7	4	14	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGATTTAGAAAAGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	118731937	118754995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118732239_118746368_118747791_118749613_118749997_118750677_118750838_118751236_118751314_118752076_118752178_118752863
ENSMUSG00000040009.7_0	chr10	+	3507	4	FSM	ENSMUSG00000040009.7	ENSMUST00000037813.5	3519	4	0	12	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGCCAAACTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74803008	74852727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_74803215_74814622_74814689_74826765_74827973_74850699
ENSMUSG00000040010.11_0	chr8	-	3496	10	FSM	ENSMUSG00000040010.11	ENSMUST00000045557.10	3517	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTAAGCTGCTGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	122634420	122607896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_122609835_122610329_122610508_122611721_122611872_122612647_122612745_122613018_122613123_122613596_122613721_122614235_122614281_122615060_122615167_122623166_122623305_122633804
ENSMUSG00000040018.10_0	chr19	-	930	8	FSM	ENSMUSG00000040018.10	ENST00000649102.1	942	8	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAATCGCTAGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	43739941	43693365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43693391_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735279_43737228_43737352_43739782
ENSMUSG00000040018.10_7	chr19	-	4763	9	FSM	ENSMUSG00000040018.10	ENSMUST00000045562.6	4798	9	30	5	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTCATTTTTGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	43741409	43721697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43725292_43726475_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735362_43737228_43737352_43739782_43739974_43741260
ENSMUSG00000040018.10_8	chr19	-	906	7	ISM	ENSMUSG00000040018.10	ENST00000649102.1	942	8	8	33113	8	-4783	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACAGCCCTGCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	43739942	43726475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_43726590_43728275_43728431_43730271_43730354_43732055_43732224_43735174_43735279_43737228_43737352_43739782
ENSMUSG00000040021.14_0	chr10	+	7190	8	FSM	ENSMUSG00000040021.14	ENSMUST00000165952.9	7209	8	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGACTGGAAAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	7556994	7592222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7557215_7567098_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ENSMUSG00000040021.14_2	chr10	+	4159	7	FSM	ENSMUSG00000040021.14	ENSMUST00000217931.2	4186	7	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACCTAACCTAGCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	7567037	7589350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7567579_7573265_7573414_7577373_7578885_7581223_7581807_7586228_7586412_7586612_7586720_7588264
ENSMUSG00000040022.15_0	chr19	-	4463	6	FSM	ENSMUSG00000040022.15	ENSMUST00000051996.13	4482	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCTGCTATCTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	59931787	59892137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_59894727_59895367_59895576_59901834_59901881_59924037_59924507_59925419_59925863_59931079
ENSMUSG00000040025.18_0	chr4	-	4113	5	FSM	ENSMUSG00000040025.18	ENSMUST00000152796.8	4129	5	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTGTTTGGCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	131939602	131912226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040025.18_2	chr4	-	2751	4	FSM	ENSMUSG00000040025.18	ENST00000541996.5	2769	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCACTCCAGTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	131939420	131913381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131914259_131931442_131933027_131938062_131938143_131939210
ENSMUSG00000040025.18_3	chr4	-	940	4	FSM	ENSMUSG00000040025.18	ENSMUST00000085181.5	955	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAATGTTCTGTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	131939393	131913606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131914259_131938062_131938143_131938742_131938768_131939210
ENSMUSG00000040026.9_0	chr7	-	546	4	FSM	ENSMUSG00000040026.9	ENSMUST00000006956.9	555	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46365122	46361428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46361689_46362012_46362152_46364433_46364529_46365070
ENSMUSG00000040026.9_1	chr7	-	465	3	ISM	ENSMUSG00000040026.9	ENSMUST00000006956.9	555	4	625	7	625	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46364499	46361428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_46361689_46362012_46362152_46364433
ENSMUSG00000040028.11_0	chr8	-	5717	6	FSM	ENSMUSG00000040028.11	ENSMUST00000098950.6	5743	6	11	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTCAACAATAAAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	4375402	4335396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4374885
ENSMUSG00000040028.11_9	chr8	-	2315	6	FSM	ENSMUSG00000040028.11	ENSMUST00000209010.2	2317	6	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTGTTTTGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	4362618	4338343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_4339925_4345335_4345562_4351684_4351839_4354926_4355031_4361598_4361787_4362556
ENSMUSG00000040029.16_1	chr6	-	5335	25	FSM	ENSMUSG00000040029.16	ENSMUST00000048418.14	5360	25	16	9	13	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGAACTCTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	148732949	148672189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148674308_148676474_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ENSMUSG00000040029.16_2	chr6	-	5080	26	FSM	ENSMUSG00000040029.16	ENST00000256079.9	5096	26	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTGAACTCTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	148732948	148672190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148673047_148673307_148674308_148676466_148676592_148678700_148678902_148684095_148684302_148685999_148686221_148688192_148688289_148690568_148690667_148691294_148691421_148692938_148693006_148698138_148698265_148700120_148700282_148701224_148701391_148701678_148701769_148702984_148703102_148703410_148703488_148706119_148706220_148707882_148708018_148711377_148711463_148712165_148712261_148713564_148713655_148717982_148718140_148719461_148719621_148723092_148723250_148725901_148725984_148732661
ENSMUSG00000040033.17_0	chr10	+	4372	24	FSM	ENSMUSG00000040033.17	ENSMUST00000085708.3	4394	24	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	128106455	128128707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128117970_128117989_128118580_128118675_128118981_128119027_128119101_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ENSMUSG00000040033.17_1	chr10	+	4384	24	FSM	ENSMUSG00000040033.17	ENSMUST00000105238.10	4397	24	2	11	2	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAACAACAAAGATACT	NA	NA	NA	NA	NA	NA	NA	NA	128106446	128128707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128106587_128112354_128112493_128112616_128112768_128112991_128113088_128113512_128113603_128113690_128113767_128114153_128114240_128114534_128114687_128116950_128117110_128117218_128117312_128117517_128117578_128117970_128117989_128118580_128118675_128118981_128119027_128119098_128119186_128119352_128119452_128119552_128119689_128119795_128119849_128119966_128120062_128120815_128120953_128121140_128121324_128121529_128121588_128126372_128126900_128127096
ENSMUSG00000040034.16_0	chr10	+	1270	8	FSM	ENSMUSG00000040034.16	ENSMUST00000040135.9	1286	8	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCCAATGTTGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	7543278	7554641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7549348_7549485_7550769_7550922_7552003_7552127_7554331
ENSMUSG00000040034.16_2	chr10	+	843	6	FSM	ENSMUSG00000040034.16	ENST00000367404.8	858	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTCATGAAAGTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7543327	7554551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_7543446_7543765_7543889_7545316_7545395_7546702_7546884_7552003_7552127_7554331
ENSMUSG00000040040.17_0	chr14	+	3074	26	FSM	ENSMUSG00000040040.17	ENSMUST00000122063.8	3088	26	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGCTCCCTGAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	57661525	57755386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_57661645_57667994_57668091_57672251_57672315_57674683_57674741_57675698_57675753_57676322_57676387_57677162_57677233_57678387_57678479_57679334_57679440_57681811_57681915_57683021_57683137_57684997_57685230_57688127_57688199_57692917_57693005_57710431_57710532_57713499_57713587_57715347_57715535_57717353_57717463_57718113_57718265_57718852_57718969_57725028_57725082_57726348_57726415_57733629_57733737_57744661_57744729_57754437_57754549_57754793
ENSMUSG00000040043.18_0	chr10	-	3371	15	FSM	ENSMUSG00000040043.18	ENSMUST00000238843.2	3380	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCATAAGTACACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	128016157	127967426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127971522_127971601_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128015661_128015715_128015817
ENSMUSG00000040043.18_2	chr10	-	3291	14	FSM	ENSMUSG00000040043.18	ENSMUST00000099139.9	3302	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTCATAAGTACACCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	128016155	127967426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128015661_128015715_128015817
ENSMUSG00000040043.18_5	chr10	-	1460	13	FSM	ENSMUSG00000040043.18	ENSMUST00000092033.4	1481	13	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACAATCGCAGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	128012333	127968981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127969237_127969509_127969595_127969996_127970078_127970865_127970977_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974067_127979263_127979422_127981541_127981634_127982470_127982530_127987051_127987225_128012218
ENSMUSG00000040043.18_8	chr10	-	1314	12	FSM	ENSMUSG00000040043.18	ENST00000542360.1	1322	12	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCAAAGACACCAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	128012299	127969053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127969369_127969509_127969595_127969996_127970078_127970865_127970977_127971522_127971601_127973342_127973437_127973529_127973577_127973788_127973899_127973986_127974095_127981488_127981634_127982470_127982530_128012218
ENSMUSG00000040044.12_0	chr4	-	2259	20	FSM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34614913	34570802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUSG00000040044.12_1	chr4	-	2289	20	FSM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34614940	34570802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021_34611077_34614864
ENSMUSG00000040044.12_2	chr4	-	2204	19	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	3843	7	3843	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34611070	34570802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021
ENSMUSG00000040044.12_4	chr4	-	2210	19	ISM	ENSMUSG00000040044.12	ENSMUST00000048706.10	2300	20	3871	7	3840	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34611073	34570802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578033_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130_34607229_34611021
ENSMUSG00000040044.12_5	chr4	-	2158	18	ISM	ENSMUSG00000040044.12	ENSMUST00000108142.8	2266	20	7682	7	7682	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGTATACATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34607231	34570802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_34571019_34571728_34571809_34572464_34572573_34575031_34575174_34576351_34576450_34577952_34578030_34579742_34579877_34584803_34584884_34585572_34585690_34586443_34586508_34586948_34587083_34593060_34593175_34595076_34595237_34597307_34597442_34598607_34598757_34599703_34599809_34605536_34605682_34607130
ENSMUSG00000040048.15_0	chr17	-	716	4	FSM	ENSMUSG00000040048.15	ENSMUST00000045602.9	732	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2737	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAAACTGTGTTTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	24943443	24941040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24941195_24941354_24941495_24941628_24941768_24943160
ENSMUSG00000040054.18_1	chr10	+	8285	30	FSM	ENSMUSG00000040054.18	ENST00000379441.7	8303	30	10	8	-5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGATAAAAGACTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127927473	127965159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127927646_127944762_127944901_127946623_127947013_127947102_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ENSMUSG00000040054.18_31	chr10	+	8395	29	FSM	ENSMUSG00000040054.18	ENST00000549884.6	8410	29	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGATAAAAGACTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127932737	127965159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127932930_127944762_127944901_127946623_127947218_127948450_127948637_127949331_127949551_127950202_127950653_127950893_127950955_127951929_127952039_127952174_127952277_127952415_127952627_127954423_127954525_127954823_127954890_127955138_127955370_127955492_127955748_127956979_127957195_127957459_127957535_127957668_127957850_127957936_127957997_127958174_127958320_127958892_127959525_127959634_127959858_127959975_127960132_127960203_127960356_127960761_127961052_127961137_127961271_127961367_127961515_127961886_127962111_127962194_127962339_127962456
ENSMUSG00000040084.10_0	chr2	+	3657	23	FSM	ENSMUSG00000040084.10	ENSMUST00000038341.8	3668	23	8	3	8	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTCTGTTGCTGGCAAT	NA	NA	NA	NA	NA	NA	NA	NA	118428699	118472069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118428943_118430618_118430766_118435894_118435955_118437024_118437170_118440263_118440461_118443055_118443223_118445411_118445627_118445924_118446017_118448186_118448417_118452615_118452729_118453550_118453667_118454761_118454812_118456503_118456562_118457333_118457443_118460383_118460647_118461425_118461560_118462239_118462381_118462891_118462993_118465608_118465759_118467180_118467324_118468881_118469057_118470113_118470221_118471568
ENSMUSG00000040086.14_2	chr3	-	2374	23	FSM	ENSMUSG00000040086.14	ENST00000326637.8	2383	23	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTGGGTGGCCTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	154760993	154533137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_154533288_154539282_154539343_154562157_154562268_154577729_154577863_154580768_154580822_154581127_154581181_154644387_154644493_154645219_154645415_154645510_154645569_154645661_154645755_154646668_154646726_154647244_154647332_154662576_154662727_154663326_154663422_154667409_154667515_154667587_154667733_154674844_154674981_154684785_154684885_154735897_154736009_154743024_154743142_154744138_154744202_154760184_154760294_154760903
ENSMUSG00000040097.17_0	chr17	-	2769	6	FSM	ENSMUSG00000040097.17	ENSMUST00000045517.10	2798	6	13	16	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATGCAAATAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	23982736	23974403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949
ENSMUSG00000040097.17_1	chr17	-	2423	7	FSM	ENSMUSG00000040097.17	ENSMUST00000086325.13	2443	7	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAGAATGCAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	23990488	23974405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23974919_23975520_23975785_23979177_23979442_23979580_23980091_23981139_23981569_23981949_23982293_23990388
ENSMUSG00000040102.11_0	chr6	+	6243	3	FSM	ENSMUSG00000040102.11	ENSMUST00000036003.8	6267	3	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCTTTTGATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	146992893	147014269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146993866_147003063_147003258_147009192
ENSMUSG00000040105.4_0	chr19	+	2823	1	FSM	ENSMUSG00000040105.4	ENSMUST00000045674.4	2859	1	28	8	28	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAAATCTTTAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	28941380	28944203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_28941400_28944200
ENSMUSG00000040111.18_0	chr9	-	7454	20	FSM	ENSMUSG00000040111.18	ENSMUST00000045682.7	7488	20	18	16	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACAAATAATAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	40367042	40204544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40324592_40324671_40366589
ENSMUSG00000040111.18_1	chr9	-	7432	19	FSM	ENSMUSG00000040111.18	ENSMUST00000216821.2	7445	19	0	13	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACAAATAATAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	40287717	40204544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40287208
ENSMUSG00000040111.18_2	chr9	-	7318	20	FSM	ENSMUSG00000040111.18	ENSMUST00000121357.8	7334	20	0	16	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTACAAATAATAAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	40257586	40204544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_40209376_40210897_40211016_40211284_40211393_40211735_40211748_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40257203
ENSMUSG00000040111.18_3	chr9	-	7269	19	NIC	ENSMUSG00000040111.18	novel	7334	20	NA	NA	41	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATAATAAATGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	40257545	40204540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_40209376_40210897_40211016_40211284_40211393_40214793_40214885_40215618_40215823_40216361_40216466_40217627_40217771_40218035_40218155_40219151_40219296_40219588_40219779_40221193_40221351_40223053_40223170_40226262_40226344_40226983_40227080_40228160_40228265_40228804_40228890_40238713_40238735_40244740_40244952_40257203
ENSMUSG00000040112.10_0	chr6	+	4146	8	FSM	ENSMUSG00000040112.10	ENSMUST00000036111.10	4162	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTGTTGATACTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	146944271	146975483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146944399_146947608_146947647_146949631_146949800_146951325_146951387_146957349_146957490_146961639_146961750_146962920_146962991_146972051
ENSMUSG00000040118.16_0	chr5	+	7397	38	NNC	ENSMUSG00000040118.16	novel	7311	38	NA	NA	24	0	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACAGTTGGAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	16139712	16579502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_16140107_16217391_16217474_16230746_16230864_16367990_16368051_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16531309_16531382_16532970_16533043_16538761_16538824_16545704_16545786_16547671_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ENSMUSG00000040118.16_3	chr5	+	3909	39	FSM	ENSMUSG00000040118.16	ENSMUST00000039370.14	3933	39	1	23	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAAGAAGAAGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16139786	16576044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16140107_16217391_16217474_16230746_16230864_16367990_16368051_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16527536_16527594_16531309_16531382_16532970_16533043_16538761_16538824_16545704_16545782_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ENSMUSG00000040118.16_4	chr5	+	7283	38	FSM	ENSMUSG00000040118.16	ENSMUST00000078272.13	7311	38	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAAGTCACCACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	16139803	16579492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16140107_16217391_16217474_16230746_16230864_16367990_16368051_16399752_16399795_16417873_16418004_16451663_16451796_16469255_16469326_16471684_16471736_16472373_16472474_16504926_16505086_16507290_16507396_16517498_16517578_16518639_16518690_16519903_16519994_16522632_16522711_16524235_16524311_16525081_16525157_16531309_16531382_16532970_16533043_16538761_16538824_16545704_16545782_16547680_16547742_16554409_16554508_16557588_16557677_16558820_16558884_16559559_16559664_16560492_16560580_16561801_16561870_16562286_16562326_16562763_16562836_16563928_16564082_16564181_16564235_16566817_16566874_16567262_16567393_16570356_16570467_16570788_16570872_16575555
ENSMUSG00000040118.16_8	chr5	+	1263	4	FSM	ENSMUSG00000040118.16	ENSMUST00000196750.2	1272	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTAGCCCTCTGTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	16139910	16294013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16140107_16217391_16217474_16230746_16230864_16293145
ENSMUSG00000040123.18_0	chr14	-	5276	8	FSM	ENSMUSG00000040123.18	ENSMUST00000039812.16	5290	8	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTTTGGTGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	57049162	57028044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57047997_57048054_57049048
ENSMUSG00000040123.18_1	chr14	-	5345	8	FSM	ENSMUSG00000040123.18	ENSMUST00000173954.3	5357	8	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGATATTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	57048916	57028051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57048790
ENSMUSG00000040123.18_2	chr14	-	5337	8	FSM	ENSMUSG00000040123.18	ENSMUST00000111285.9	5351	8	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTTTGGTGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	57049159	57028044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57031958_57034060_57034268_57035124_57035288_57036366_57036650_57041605_57041697_57041871_57042321_57048196_57048317_57049048
ENSMUSG00000040124.6_0	chr1	-	2521	5	FSM	ENSMUSG00000040124.6	ENSMUST00000045138.6	2538	5	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTTTACAGTATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	163231230	163212485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163214267_163219978_163220120_163222159_163222262_163224380_163224739_163231091
ENSMUSG00000040128.10_0	chr4	-	1633	2	FSM	ENSMUSG00000040128.10	ENSMUST00000049357.10	1648	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTAGTCTTGGCTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33248501	33245428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_33246508_33247947
ENSMUSG00000040133.3_0	chr2	-	3875	3	FSM	ENSMUSG00000040133.3	ENSMUST00000039160.3	3899	3	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCTGTTTCTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	118203885	118107599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118110836_118114386_118114640_118203499
ENSMUSG00000040136.11_0	chr7	-	5167	39	FSM	ENSMUSG00000040136.11	ENST00000644772.1	5178	39	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTTTCACTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	45829393	45753697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776239_45784904_45785011_45785585_45785662_45786031_45786196_45786283_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816316_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ENSMUSG00000040136.11_20	chr7	-	4823	39	FSM	ENSMUSG00000040136.11	ENST00000646902.1	4841	39	11	7	-8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGAAATTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45829412	45753976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757609_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776239_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816319_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ENSMUSG00000040136.11_25	chr7	-	4833	39	FSM	ENSMUSG00000040136.11	ENST00000642271.1	4852	39	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGAAATTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45829392	45753976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758176_45758291_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776239_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816319_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ENSMUSG00000040136.11_28	chr7	-	4752	38	FSM	ENSMUSG00000040136.11	ENST00000683136.1	4770	38	11	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGAAATTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45829425	45753976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45754186_45754887_45754951_45755232_45755367_45756008_45756113_45756375_45756485_45756661_45756741_45757507_45757639_45757738_45757860_45758964_45759068_45762488_45762582_45764365_45764524_45765197_45765268_45766329_45766497_45766595_45766838_45767393_45767494_45768379_45768506_45769798_45769937_45771532_45771614_45772281_45772367_45773316_45773416_45774266_45774306_45776208_45776239_45784904_45785011_45785585_45785662_45786031_45786149_45786287_45786394_45787382_45787529_45788888_45788930_45800150_45800314_45800959_45801095_45803840_45803997_45806530_45806696_45815342_45815532_45816319_45816560_45819247_45819415_45824783_45824906_45827865_45828008_45829225
ENSMUSG00000040139.15_0	chr7	-	1104	4	FSM	ENSMUSG00000040139.15	ENSMUST00000068996.13	1126	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGTGGACAGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137012478	136977311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_136978081_136989099_136989163_136989268_136989431_137012368
ENSMUSG00000040139.15_1	chr7	-	688	5	FSM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGATAAATATTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	137012464	136977876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268_136989431_137012368
ENSMUSG00000040139.15_2	chr7	-	596	4	ISM	ENSMUSG00000040139.15	ENSMUST00000117404.8	699	5	23033	8	23030	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAAATATTAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	136989431	136977873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_136978081_136978683_136978847_136989099_136989163_136989268
ENSMUSG00000040146.10_0	chr9	-	2540	19	FSM	ENSMUSG00000040146.10	ENSMUST00000045726.8	2543	19	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCGGTCACATCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21900740	21882823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21883306_21885317_21885433_21885683_21885837_21886903_21887004_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144_21900256_21900660
ENSMUSG00000040146.10_1	chr9	-	2461	18	ISM	ENSMUSG00000040146.10	ENSMUST00000045726.8	2543	19	486	1	486	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCGGTCACATCCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	21900256	21882823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_21883306_21885317_21885433_21885683_21885837_21886903_21887004_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144
ENSMUSG00000040146.10_11	chr9	-	2072	18	FSM	ENSMUSG00000040146.10	ENST00000393423.7	2081	18	7	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGGTAAGCAGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21900738	21885323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21885433_21885683_21885837_21886903_21887026_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144_21900256_21900660
ENSMUSG00000040146.10_9	chr9	-	1995	17	ISM	ENSMUSG00000040146.10	ENST00000393423.7	2081	18	489	2	486	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGGTAAGCAGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21900256	21885323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_21885433_21885683_21885837_21886903_21887026_21887087_21887157_21887245_21887342_21888034_21888157_21888240_21888274_21888485_21888573_21888677_21888726_21891797_21891883_21891979_21892084_21892585_21892802_21892899_21893040_21898794_21899010_21899146_21899201_21899341_21899572_21900144
ENSMUSG00000040151.10_0	chr3	-	1887	6	FSM	ENSMUSG00000040151.10	ENST00000370548.3	1902	6	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGGAGAATTAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	144171037	144072545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144073722_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807
ENSMUSG00000040151.10_1	chr3	-	6163	7	FSM	ENSMUSG00000040151.10	ENSMUST00000043325.9	6177	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTCTGGTGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	144275935	144135473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144140476_144141222_144141381_144143355_144143454_144153030_144153170_144159712_144159799_144170807_144171047_144275494
ENSMUSG00000040152.9_0	chr2	+	5828	22	FSM	ENSMUSG00000040152.9	ENSMUST00000039559.9	5848	22	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1025	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTATACTTACGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	117942367	117957605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_117942557_117943095_117943191_117943450_117944011_117944814_117944891_117945131_117945335_117945428_117945552_117946310_117946405_117947964_117948139_117948642_117948820_117949129_117949304_117949559_117949688_117949802_117949956_117950297_117950517_117950702_117950811_117951316_117951477_117951597_117951717_117952926_117953162_117953354_117953583_117953748_117954021_117954396_117954495_117954600_117954741_117955502
ENSMUSG00000040158.13_0	chr11	+	1513	4	FSM	ENSMUSG00000040158.13	ENSMUST00000040687.12	1523	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTCTTTGTCTGGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	73067917	73072977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73068169_73071214_73071335_73071556_73071635_73071913
ENSMUSG00000040164.4_0	chr2	-	1757	3	FSM	ENSMUSG00000040164.4	ENST00000537075.3	1769	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCCCACAGCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	164013114	164006452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_164006936_164009731_164010812_164012920
ENSMUSG00000040167.17_0	chr7	-	4267	5	FSM	ENSMUSG00000040167.17	ENST00000617859.4	4279	5	8	4	8	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	3302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	131010791	130990382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_130991448_130991589_130994310_130995483_130995667_130998397_130998557_131010651
ENSMUSG00000040167.17_6	chr7	-	4415	4	FSM	ENSMUSG00000040167.17	ENSMUST00000046306.15	4430	4	13	2	-11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGACTTTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	131012237	130990382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_130994310_130995483_130995667_130998397_130998581_131012115
ENSMUSG00000040174.15_0	chr2	-	1386	10	FSM	ENSMUSG00000040174.15	ENSMUST00000111240.8	1395	10	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTGAACATGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	93841145	93810896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838472_93838768_93838938_93841027
ENSMUSG00000040174.15_23	chr2	-	684	6	FSM	ENSMUSG00000040174.15	ENST00000302708.9	699	6	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTAAGTATTCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	93838895	93826531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93838358_93838488_93838787
ENSMUSG00000040174.15_7	chr2	-	1224	10	FSM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACAGATGATTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	93841075	93810985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787_93838938_93841027
ENSMUSG00000040174.15_8	chr2	-	1168	9	ISM	ENSMUSG00000040174.15	ENSMUST00000040005.13	1228	10	2146	4	-22	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCACAGATGATTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	93838929	93810985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_93811323_93811860_93811960_93826527_93826738_93831769_93831859_93833397_93833502_93835077_93835126_93837191_93837227_93838383_93838488_93838787
ENSMUSG00000040177.11_0	chr7	-	6741	6	FSM	ENSMUSG00000040177.11	ENSMUST00000059438.11	6773	6	19	13	19	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACTTAGAAAATACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	130964469	130939961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_130945534_130952379_130952832_130959188_130959396_130962617_130962691_130963461_130963666_130964236
ENSMUSG00000040181.15_0	chr1	-	2370	9	FSM	ENSMUSG00000040181.15	ENSMUST00000046049.14	2388	9	11	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTACCAAGTGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	162694168	162657136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700_162663901_162667186_162667330_162677630_162677794_162678923_162679113_162686993_162687132_162693807
ENSMUSG00000040181.15_5	chr1	-	1543	8	FSM	ENSMUSG00000040181.15	ENST00000402921.6	1561	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATCTAACTGGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	162694163	162657537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162657884_162660531_162660605_162661098_162661455_162663700_162663901_162667186_162667330_162677630_162677794_162686993_162687132_162694039
ENSMUSG00000040183.14_0	chr4	-	2273	15	ISM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	3549	10	-141	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAAAGCCAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	32860583	32806120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321
ENSMUSG00000040183.14_1	chr4	-	2353	16	FSM	ENSMUSG00000040183.14	ENST00000522441.5	2364	16	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTAAAAGCCAGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	32864131	32806120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_32806643_32808683_32808811_32810197_32810312_32815234_32815388_32816910_32817097_32817418_32817551_32818604_32818710_32821256_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32864056
ENSMUSG00000040183.14_12	chr4	-	1020	9	FSM	ENSMUSG00000040183.14	ENST00000485637.5	1029	9	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCTTACTGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	32864128	32821247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321_32860589_32864056
ENSMUSG00000040183.14_17	chr4	-	948	8	ISM	ENSMUSG00000040183.14	ENST00000485637.5	1029	9	3544	5	-146	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCATCTTACTGATCATG	NA	NA	NA	NA	NA	NA	NA	NA	32860588	32821247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_32821335_32822152_32822252_32823405_32823505_32824395_32824495_32827088_32827188_32828709_32828809_32836334_32836434_32860321
ENSMUSG00000040187.16_1	chr6	+	2911	17	FSM	ENSMUSG00000040187.16	ENSMUST00000111639.8	2923	17	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTGCCTATTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	146697567	146735020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146697648_146704432_146704554_146706933_146707075_146707926_146708029_146711146_146711305_146712283_146712364_146714715_146714809_146720317_146720433_146722025_146722167_146723407_146723649_146724086_146724194_146724591_146724743_146726664_146726727_146728713_146728823_146729596_146729685_146731190_146731300_146734007
ENSMUSG00000040188.11_0	chr9	+	2328	9	FSM	ENSMUSG00000040188.11	ENSMUST00000045791.11	2340	9	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCACTGGCCCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	57468234	57496075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57468394_57484475_57484545_57484921_57485021_57486715_57486834_57488066_57488196_57488772_57488933_57490134_57490237_57494362_57494484_57494704
ENSMUSG00000040195.12_0	chr10	+	2330	11	FSM	ENSMUSG00000040195.12	ENSMUST00000118728.8	2362	11	28	4	28	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAAGAAAGTCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	127503040	127532805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127503253_127512508_127512698_127514802_127515005_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ENSMUSG00000040195.12_2	chr10	+	1492	7	FSM	ENSMUSG00000040195.12	ENSMUST00000118612.8	1522	7	17	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATTTGAAAATAAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	127512949	127531024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297
ENSMUSG00000040195.12_3	chr10	+	5994	9	FSM	ENSMUSG00000040195.12	ENSMUST00000048099.5	6002	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTTATAGTAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	127512934	127536910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127513097_127524101_127524218_127525093_127525314_127526729_127526803_127528836_127528931_127529352_127529468_127530297_127530524_127531237_127531412_127532096
ENSMUSG00000040204.7_0	chr9	+	2170	4	FSM	ENSMUSG00000040204.7	ENSMUST00000045802.7	2188	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTACCTAAGTAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	65797527	65810539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65808839
ENSMUSG00000040204.7_1	chr9	+	524	5	FSM	ENSMUSG00000040204.7	ENST00000558008.3	533	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAAAGAAACCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	65797693	65809003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65797757_65798013_65798092_65800653_65800817_65803734_65803791_65808839
ENSMUSG00000040204.7_5	chr9	+	458	4	ISM	ENSMUSG00000040204.7	ENST00000558008.3	533	5	323	9	323	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAAAGAAACCAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	65798016	65809003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_65798092_65800653_65800817_65803734_65803791_65808839
ENSMUSG00000040209.13_0	chr3	-	13810	9	FSM	ENSMUSG00000040209.13	ENSMUST00000041124.13	13834	9	23	1	23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCTTCTATCTGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9675122	9492080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_9503959_9504844_9504943_9511019_9511125_9512334_9512603_9517323_9517425_9535951_9536179_9539558_9539663_9630123_9630360_9674329
ENSMUSG00000040212.13_0	chr7	-	721	5	FSM	ENSMUSG00000040212.13	ENSMUST00000038876.13	736	5	10	5	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGACTCGGCTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45570818	45567451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570665
ENSMUSG00000040212.13_3	chr7	-	769	5	FSM	ENSMUSG00000040212.13	ENSMUST00000164119.3	784	5	8	7	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACGAGCCTGACTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	45570267	45567458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45567660_45568741_45568883_45569358_45569462_45569712_45569829_45570059
ENSMUSG00000040213.14_0	chr3	+	1860	14	FSM	ENSMUSG00000040213.14	ENSMUST00000106218.8	1888	14	10	18	10	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGAAAGAAACAAAACCAACA	NA	NA	NA	NA	NA	NA	NA	NA	142406821	142450270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_142406937_142412449_142412553_142424136_142424196_142426121_142426267_142428875_142429026_142431181_142431269_142431724_142431851_142431942_142432064_142435519_142435597_142436962_142437053_142440234_142440422_142443532_142443607_142443985_142444073_142449831
ENSMUSG00000040219.5_0	chr9	-	3620	22	FSM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTGAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	49397523	49348268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969_49396043_49397445
ENSMUSG00000040219.5_1	chr9	-	3543	21	ISM	ENSMUSG00000040219.5	ENSMUST00000055096.5	3628	22	1481	7	1481	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCTGAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	49396044	49348269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_49349757_49351456_49351683_49353136_49353237_49354401_49354504_49355967_49356037_49356484_49356584_49357041_49357180_49357824_49357886_49359226_49359320_49364623_49364793_49367160_49367250_49368132_49368203_49369295_49369485_49369949_49370011_49371689_49371762_49378071_49378132_49381528_49381651_49382425_49382504_49383161_49383184_49383682_49383844_49395969
ENSMUSG00000040220.11_0	chr8	+	1666	11	FSM	ENSMUSG00000040220.11	ENSMUST00000093043.7	1681	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATATTCTCTGTCGTT	NA	NA	NA	NA	NA	NA	NA	NA	124245581	124263383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991_124260058_124263111
ENSMUSG00000040220.11_6	chr8	+	3441	10	FSM	ENSMUSG00000040220.11	ENSMUST00000212923.2	3469	10	26	2	26	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATATATTTTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	124245620	124262143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124245692_124247342_124247430_124249676_124249875_124250816_124251024_124252357_124252413_124253203_124253410_124254650_124254819_124255116_124255204_124257565_124257776_124259991
ENSMUSG00000040225.16_0	chr1	-	11272	35	FSM	ENSMUSG00000040225.16	ENSMUST00000182149.8	11289	35	8	9	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATACTTCTGCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	162568086	162498302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162501226_162501667_162501721_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ENSMUSG00000040225.16_31	chr1	-	10149	34	FSM	ENSMUSG00000040225.16	ENST00000367742.7	10158	34	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATGAGTCTTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	162568076	162499362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ENSMUSG00000040225.16_35	chr1	-	9007	34	FSM	ENSMUSG00000040225.16	ENSMUST00000182593.8	9022	34	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTGATCTCCCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	162568043	162500465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162501226_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ENSMUSG00000040225.16_39	chr1	-	8791	35	FSM	ENSMUSG00000040225.16	ENSMUST00000028016.16	8815	35	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATCGTAAAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	162568109	162500984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162501226_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550851_162552272_162552439_162567893
ENSMUSG00000040225.16_6	chr1	-	11487	35	FSM	ENSMUSG00000040225.16	ENSMUST00000182660.8	11502	35	8	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATACTTCTGCCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	162568117	162498302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_162501226_162503173_162503411_162504259_162504387_162504923_162505028_162505578_162505798_162507068_162507177_162507394_162507627_162508328_162508466_162508789_162508903_162509886_162510091_162511623_162511826_162515684_162515787_162518709_162518803_162519941_162520194_162520304_162520494_162523846_162523933_162525001_162525843_162526447_162526603_162529750_162529960_162531937_162534191_162535334_162535543_162536421_162536681_162537097_162537256_162537851_162538399_162540872_162540927_162541811_162541957_162542960_162543049_162543154_162543289_162543847_162543931_162546258_162546480_162548049_162548176_162548998_162549109_162550678_162550857_162552272_162552439_162567893
ENSMUSG00000040229.12_0	chrX	+	1687	2	FSM	ENSMUSG00000040229.12	ENST00000378138.5	1702	2	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTAATAAAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13499743	13507079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13499797_13505445
ENSMUSG00000040229.12_3	chrX	+	1628	1	ISM	ENSMUSG00000040229.12	ENSMUST00000041708.10	2088	4	7124	16	5708	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	818	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTAATAAAAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	13505451	13507079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_13505500_13507100
ENSMUSG00000040234.17_0	chr6	-	3220	12	FSM	ENSMUSG00000040234.17	ENSMUST00000037709.16	3241	12	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATGCTTAATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	146536083	146503858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_146505520_146507625_146507789_146509076_146509175_146511313_146511467_146512371_146512453_146514875_146514963_146520031_146520210_146521337_146521510_146523372_146523494_146525061_146525213_146527593_146527749_146535883
ENSMUSG00000040236.5_0	chr8	+	2530	2	FSM	ENSMUSG00000040236.5	ENSMUST00000044857.4	2546	2	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCTTTAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	3726305	3731246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3726604_3729014
ENSMUSG00000040236.5_3	chr8	+	312	1	FSM	ENSMUSG00000040236.5	ENSMUST00000207787.2	4411	1	2782	1317	269	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACGAGCAGATCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3729291	3729603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3729300_3729600
ENSMUSG00000040236.5_4	chr8	+	372	2	FSM	ENSMUSG00000040236.5	ENST00000595985.1	386	2	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGGACGAGCAGATC	NA	NA	NA	NA	NA	NA	NA	NA	3729026	3729599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3729093_3729293
ENSMUSG00000040242.15_0	chr6	+	2753	6	FSM	ENSMUSG00000040242.15	ENSMUST00000067404.13	2766	6	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGTCTGGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	146479361	146500688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146496673_146496788_146498792
ENSMUSG00000040242.15_10	chr6	+	894	5	FSM	ENSMUSG00000040242.15	ENSMUST00000058245.5	918	5	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAATGAAAGAACGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	146479430	146494351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131
ENSMUSG00000040242.15_3	chr6	+	2858	7	FSM	ENSMUSG00000040242.15	ENSMUST00000111663.9	2880	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTGGTCTGGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	146479370	146500688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146479707_146487179_146487317_146490237_146490356_146491391_146491535_146494131_146494246_146496673_146496788_146498792
ENSMUSG00000040247.7_0	chr19	-	1969	10	FSM	ENSMUSG00000040247.7	ENSMUST00000235450.2	1996	10	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCACCCTGGCCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	4241263	4234362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4235073_4235350_4235506_4237940_4238131_4238244_4238311_4238942_4239058_4239211_4239319_4239404_4239513_4239862_4239963_4240662_4240835_4241017
ENSMUSG00000040247.7_1	chr19	-	1189	8	FSM	ENSMUSG00000040247.7	ENST00000312390.9	1205	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCAGGCATGTATCCTC	NA	NA	NA	NA	NA	NA	NA	NA	4240804	4234672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4235073_4235350_4235506_4238244_4238311_4238942_4239054_4239211_4239319_4239404_4239513_4239862_4239963_4240662
ENSMUSG00000040249.16_1	chr10	-	14847	89	FSM	ENSMUSG00000040249.16	ENSMUST00000049149.15	14888	89	8	33	8	-33	multi-exon	TRUE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGGAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127457009	127374062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127374960_127375101_127375247_127375340_127375432_127375535_127375601_127375726_127375829_127376021_127376197_127376487_127376650_127376818_127376993_127377102_127377244_127377507_127377685_127378053_127378171_127378435_127378543_127378955_127379135_127380287_127380557_127381403_127381524_127381599_127381735_127381868_127382010_127382262_127382386_127382705_127382826_127384183_127384317_127384406_127384514_127385185_127385303_127385776_127385903_127386053_127386177_127386475_127386596_127386813_127386931_127387537_127387632_127388029_127388179_127388579_127388769_127389235_127389442_127389560_127389749_127390132_127390253_127390449_127390536_127390816_127391001_127391522_127391714_127391859_127392001_127392078_127392202_127392476_127392606_127392752_127392870_127393062_127393186_127393280_127393431_127393942_127394057_127394404_127394525_127394699_127394829_127394965_127395092_127395836_127396030_127396323_127396529_127399472_127399663_127402325_127402704_127403016_127403142_127403230_127403383_127404221_127404349_127404457_127404588_127404767_127404903_127405152_127405285_127407274_127407410_127407757_127407899_127408285_127408436_127408617_127408713_127408796_127408972_127409148_127409377_127409840_127409973_127410135_127410381_127410822_127410988_127411152_127411358_127412308_127412507_127412678_127412925_127413856_127414058_127414400_127414584_127417590_127417759_127419249_127419331_127419690_127419808_127420181_127420308_127420481_127420623_127423937_127424064_127424277_127424480_127425423_127425647_127426425_127426607_127427770_127428008_127429221_127429366_127429648_127429839_127430817_127431041_127431153_127431317_127441277_127441542_127441654_127441784_127443814_127443935_127446211_127446350_127448525_127448649_127456486
ENSMUSG00000040250.15_0	chr6	-	3045	18	FSM	ENSMUSG00000040250.15	ENSMUST00000032427.15	3059	18	5	9	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146479328	146451138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_146451484_146451584_146451663_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_6	chr6	-	2473	17	FSM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146478834	146451138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722_146477959_146478798
ENSMUSG00000040250.15_8	chr6	-	2427	16	ISM	ENSMUSG00000040250.15	ENST00000261191.12	2479	17	886	6	886	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCAAGTATCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146477948	146451138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_146451484_146452136_146452273_146453869_146454010_146455481_146455713_146455989_146456145_146456425_146456597_146457628_146457808_146458748_146458839_146459030_146459121_146461623_146461709_146463226_146463356_146464924_146465016_146467125_146467207_146467990_146468194_146476199_146476275_146477722
ENSMUSG00000040254.12_1	chr5	+	6278	18	FSM	ENSMUSG00000040254.12	ENSMUST00000030868.11	6307	18	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAAAAAGTGTTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	12433370	12638905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_12433642_12497958_12498147_12513182_12513344_12534921_12534985_12547454_12547575_12555769_12555864_12558058_12558188_12574217_12574361_12590983_12591099_12592548_12592619_12603044_12603190_12613115_12613339_12615911_12616001_12618255_12618298_12620940_12621099_12623795_12623861_12627578_12627719_12634843
ENSMUSG00000040258.7_0	chr10	-	1664	2	FSM	ENSMUSG00000040258.7	ENSMUST00000095266.3	1675	2	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAATACTCGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127370423	127361347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127362833_127370244
ENSMUSG00000040260.9_0	chr17	-	3371	24	FSM	ENSMUSG00000040260.9	ENST00000398904.6	3380	24	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGAAAGAGGGGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	49805905	49765390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_49765776_49766080_49766252_49767634_49767767_49769168_49769230_49770953_49771062_49771490_49771660_49776400_49776490_49776687_49776795_49778990_49779076_49780313_49780421_49783475_49783584_49786693_49786994_49787457_49787643_49787751_49787811_49789954_49790094_49792404_49792523_49793471_49793539_49795214_49795319_49795972_49796084_49797021_49797356_49800848_49800944_49801402_49801478_49803152_49803243_49805733
ENSMUSG00000040263.17_0	chr8	-	2070	12	FSM	ENSMUSG00000040263.17	ENSMUST00000045884.17	2078	12	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGCAAGATGACAATGT	NA	NA	NA	NA	NA	NA	NA	NA	122556302	122523053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_122523483_122523656_122523768_122524572_122524976_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ENSMUSG00000040263.17_11	chr8	-	980	9	ISM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	7606	10	7605	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGACAGCAGCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122548614	122523734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_122523768_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520
ENSMUSG00000040263.17_8	chr8	-	1071	10	FSM	ENSMUSG00000040263.17	ENST00000622456.4	1088	10	7	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGACAGCAGCTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	122556213	122523734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_122523768_122526186_122526396_122527877_122527954_122531685_122531846_122533244_122533338_122540445_122540583_122546860_122546960_122548018_122548098_122548520_122548613_122556120
ENSMUSG00000040264.11_0	chr3	+	2814	11	FSM	ENSMUSG00000040264.11	ENSMUST00000029936.5	2823	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTTACCATAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	142300607	142324931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_142300673_142303892_142304097_142304755_142304884_142306246_142306357_142309318_142309516_142309836_142310080_142312486_142312768_142313870_142314084_142316712_142316816_142317110_142317305_142323855
ENSMUSG00000040264.11_1	chr3	+	2744	10	ISM	ENSMUSG00000040264.11	ENSMUST00000029936.5	2823	11	3292	7	3292	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTACCATAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	142303899	142324933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_142304097_142304755_142304884_142306246_142306357_142309318_142309516_142309836_142310080_142312486_142312768_142313870_142314084_142316712_142316816_142317110_142317305_142323855
ENSMUSG00000040265.17_0	chr1	-	7344	20	FSM	ENSMUSG00000040265.17	ENST00000627582.3	7360	20	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAACCCCCAATTCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	162305438	161814876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911597_161911714_161962025_161962136_162059222_162059337_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040265.17_29	chr1	-	2982	21	FSM	ENSMUSG00000040265.17	ENST00000355305.9	2996	21	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGAAGCTTATGACGAC	NA	NA	NA	NA	NA	NA	NA	NA	162305437	161819263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161819661_161838436_161838674_161839269_161839497_161847396_161847562_161911601_161911714_161962025_161962136_162059222_162059337_162101188_162101219_162102056_162102109_162113565_162113637_162123120_162123208_162135436_162135576_162138960_162139029_162141129_162141266_162146149_162146293_162148520_162148682_162149255_162149355_162181088_162181293_162182928_162183079_162234903_162234978_162305231
ENSMUSG00000040268.18_0	chr7	+	3760	13	FSM	ENSMUSG00000040268.18	ENSMUST00000120441.8	3777	13	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCACGTCCCCTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	130467497	130515037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511466_130512561
ENSMUSG00000040268.18_5	chr7	+	2273	13	FSM	ENSMUSG00000040268.18	ENSMUST00000075181.11	2301	13	21	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGAATCGGTGGAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130467648	130513791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130467731_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130511317_130511359_130512561
ENSMUSG00000040268.18_7	chr7	+	2390	11	FSM	ENSMUSG00000040268.18	ENSMUST00000151119.9	2397	11	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAGTTTAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	130467632	130511544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130467714_130479463_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065
ENSMUSG00000040268.18_9	chr7	+	1719	11	FSM	ENSMUSG00000040268.18	ENST00000392799.7	1735	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATATTCTGGCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	130479472	130513369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130479625_130484059_130484117_130487132_130487179_130493910_130494009_130499054_130499181_130502246_130502391_130503906_130503976_130506599_130506665_130507120_130507185_130510065_130510156_130512561
ENSMUSG00000040269.6_0	chr3	-	770	3	FSM	ENSMUSG00000040269.6	ENSMUST00000042148.6	783	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTGCCGTGGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8988965	8867205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_8867475_8965045_8965228_8988646
ENSMUSG00000040270.17_0	chr4	+	8488	5	FSM	ENSMUSG00000040270.17	ENSMUST00000171600.2	8493	5	0	5	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTCAAAGCTCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	32417434	32586103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32417584_32501612_32501868_32561777_32563368_32575239_32575447_32579816
ENSMUSG00000040272.15_0	chr2	-	3942	15	FSM	ENSMUSG00000040272.15	ENSMUST00000111246.8	3950	15	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTAGTGTCATTGCTAT	NA	NA	NA	NA	NA	NA	NA	NA	93680280	93663813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93680109
ENSMUSG00000040272.15_3	chr2	-	2019	15	FSM	ENSMUSG00000040272.15	ENSMUST00000041593.15	2036	15	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGTGAAAAAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	93680141	93665796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678532_93679889
ENSMUSG00000040272.15_4	chr2	-	1851	15	FSM	ENSMUSG00000040272.15	ENSMUST00000068513.11	1872	15	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGTGAAAAAGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	93680017	93665796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93666174_93666274_93666429_93666532_93666676_93668355_93668498_93668584_93668631_93669492_93669583_93670367_93670469_93671653_93671732_93672209_93672308_93672893_93672961_93673263_93673334_93674547_93674619_93676091_93676152_93678261_93678553_93679954
ENSMUSG00000040274.12_0	chr5	+	11506	8	FSM	ENSMUSG00000040274.12	ENSMUST00000165117.8	11525	8	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGCAAATAAAAACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	3393896	3580993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3393972_3394118_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ENSMUSG00000040274.12_4	chr5	+	11430	7	FSM	ENSMUSG00000040274.12	ENSMUST00000042410.5	2470	7	-192	-8768	-192	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGCAAATAAAAACAGCG	NA	NA	NA	NA	NA	NA	NA	NA	3394119	3580993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3394600_3440680_3440817_3478990_3479159_3523118_3523229_3565453_3565505_3569358_3569495_3570644
ENSMUSG00000040282.14_0	chr2	+	2767	11	FSM	ENSMUSG00000040282.14	ENSMUST00000166472.8	2770	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	115412199	115609249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517526_115517651_115607382
ENSMUSG00000040282.14_1	chr2	+	2721	11	FSM	ENSMUSG00000040282.14	ENSMUST00000110918.3	2735	11	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTACCCTTCTACCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	115412227	115609249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_115412467_115461485_115461532_115462416_115462482_115469484_115469546_115473144_115473218_115500062_115500143_115500489_115500540_115505206_115505275_115516865_115516932_115517544_115517651_115607382
ENSMUSG00000040287.10_0	chr10	+	1781	12	FSM	ENSMUSG00000040287.10	ENSMUST00000035839.3	1790	12	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAAAGTTAGAAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	127337586	127344676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127337854_127338550_127338719_127338958_127339224_127339436_127339535_127339724_127339786_127340726_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040287.10_10	chr10	+	1225	10	ISM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	310	7	310	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCTGCACCGATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	127338961	127344548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_127339224_127339436_127339535_127339724_127339796_127340726_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040287.10_2	chr10	+	1294	11	FSM	ENSMUSG00000040287.10	ENST00000332782.7	1302	11	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCCTGCACCGATTAGG	NA	NA	NA	NA	NA	NA	NA	NA	127338652	127344548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127338719_127338958_127339224_127339436_127339535_127339724_127339796_127340726_127340825_127343094_127343162_127343329_127343383_127343567_127343654_127343814_127343867_127343949_127344088_127344248
ENSMUSG00000040289.9_0	chr3	-	2399	5	FSM	ENSMUSG00000040289.9	ENSMUST00000042412.5	2423	5	11	13	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAACAATATATGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	8732305	8728431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_8730125_8731004_8731087_8731331_8731416_8731561_8731638_8731841
ENSMUSG00000040289.9_1	chr3	-	2205	5	FSM	ENSMUSG00000040289.9	ENST00000337919.9	2229	5	4	20	4	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAGCAAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	8732113	8728442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_8730125_8731004_8731087_8731322_8731416_8731561_8731638_8731841
ENSMUSG00000040296.16_0	chr4	-	3856	18	FSM	ENSMUSG00000040296.16	ENSMUST00000037907.13	3874	18	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGAACTACTTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	40239820	40204858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40206107_40208450_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40213730_40213880_40216354_40216491_40217329_40217488_40220398_40220504_40222034_40222198_40223797_40224057_40225039_40225194_40225597_40225706_40226596_40226720_40227965_40228114_40229494_40229677_40235247_40235383_40239590
ENSMUSG00000040296.16_2	chr4	-	1167	7	FSM	ENSMUSG00000040296.16	ENST00000679859.1	1181	7	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTCTCCGTCTCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	40235369	40205805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40206107_40208446_40208595_40208770_40208923_40209878_40210050_40211549_40211641_40229494_40229677_40235247
ENSMUSG00000040297.13_0	chr1	-	6299	24	FSM	ENSMUSG00000040297.13	ENSMUST00000048377.11	6327	24	23	5	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAAGCAAATCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	161704228	161643687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161646379_161647963_161648020_161655225_161655318_161655724_161655880_161656804_161656910_161660984_161661073_161661604_161662763_161665287_161665379_161666322_161666392_161671570_161671637_161672357_161672450_161672871_161672928_161673128_161673150_161674773_161674880_161676210_161676319_161679843_161679912_161680379_161680517_161681283_161681408_161684389_161684541_161684912_161685051_161686918_161687074_161689760_161689872_161691482_161691595_161703879
ENSMUSG00000040302.18_0	chr5	-	2340	5	FSM	ENSMUSG00000040302.18	ENSMUST00000042753.14	2368	5	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCTACACTGTGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	3646567	3633987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3634808_3640222_3640804_3641669_3641816_3645254_3645446_3645965
ENSMUSG00000040312.15_0	chr17	+	2644	18	FSM	ENSMUSG00000040312.15	ENSMUST00000164242.9	2656	18	6	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTGTTGCCTGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	35828002	35841887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35828127_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUSG00000040312.15_10	chr17	+	1854	14	FSM	ENSMUSG00000040312.15	ENST00000451521.6	1862	14	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATGAAGCCCGGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	35829394	35841116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836319_35837283_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044
ENSMUSG00000040312.15_4	chr17	+	2742	19	FSM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGACTGCGATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	35828074	35841908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35828127_35828687_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUSG00000040312.15_8	chr17	+	2674	18	ISM	ENSMUSG00000040312.15	ENSMUST00000045956.14	2748	19	634	1	347	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTGCGATTTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	35828706	35841911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_35828837_35829113_35829181_35829275_35829490_35831771_35832076_35835342_35835507_35835595_35835732_35835873_35835985_35836156_35836307_35837276_35837388_35837505_35837613_35838965_35839079_35839238_35839285_35839436_35839586_35839674_35839864_35839941_35840044_35841044_35841197_35841340_35841456_35841597
ENSMUSG00000040321.4_0	chr2	-	4288	2	FSM	ENSMUSG00000040321.4	ENSMUST00000050668.4	4300	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAACTAGAGATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	114031945	114023948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_114028109_114031817
ENSMUSG00000040322.11_0	chr3	+	3419	10	FSM	ENSMUSG00000040322.11	ENSMUST00000029477.11	3431	10	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGCTTGTTTTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	109030472	109075769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_109030704_109043527_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641
ENSMUSG00000040322.11_7	chr3	+	2903	10	FSM	ENSMUSG00000040322.11	ENST00000370041.4	2914	10	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGGGAAAAAACCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	109043535	109075677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_109043655_109056798_109056887_109062309_109062422_109064162_109064322_109065813_109065961_109066663_109066772_109068532_109068701_109070734_109070886_109073641_109075011_109075195
ENSMUSG00000040323.14_0	chr1	-	1486	4	NNC	ENSMUSG00000040323.14	novel	798	3	NA	NA	-196	702	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	161555254	161553108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_161553876_161554208_161554584_161554774_161554810_161554945
ENSMUSG00000040323.14_3	chr1	-	1516	3	FSM	ENSMUSG00000040323.14	ENSMUST00000151268.2	798	3	-34	-684	-34	684	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAATAAAAAGGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	161555092	161553126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_161553876_161554208_161554584_161554700
ENSMUSG00000040325.17_0	chr9	+	4695	24	FSM	ENSMUSG00000040325.17	ENST00000423656.5	4710	24	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACTGAGTGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	106699161	106757228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106699291_106706259_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742229_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUSG00000040325.17_8	chr9	+	5520	23	FSM	ENSMUSG00000040325.17	ENSMUST00000161758.3	5539	23	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCCTTTCCTTGTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106706280	106758185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106706378_106708056_106708134_106711347_106711422_106712714_106712829_106713759_106713898_106715397_106715908_106716230_106716333_106721334_106721494_106723857_106724038_106724979_106725190_106729136_106729307_106731368_106731494_106735022_106736287_106736779_106736979_106737577_106737661_106738166_106738252_106740215_106740450_106740848_106740943_106741714_106741820_106742211_106742304_106742796_106742899_106751254_106751508_106757132
ENSMUSG00000040327.17_0	chr17	-	7558	40	FSM	ENSMUSG00000040327.17	ENST00000252050.9	7571	40	10	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCGCAGGGTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	46854701	46811621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46811805_46811928_46812007_46812678_46812813_46813055_46813174_46813310_46813422_46813538_46813614_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821977_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040327.17_4	chr17	-	7477	40	FSM	ENSMUSG00000040327.17	ENST00000372647.6	7487	40	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCGCAGGGTGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	46854704	46811621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46811805_46811928_46812007_46812678_46812813_46813055_46813174_46813310_46813422_46813538_46813614_46814014_46814109_46814397_46814562_46814681_46814847_46814959_46815101_46819192_46819539_46820727_46820979_46821776_46821893_46822126_46822257_46822364_46822511_46830670_46830858_46830937_46831167_46831407_46831569_46831698_46831882_46831966_46832083_46832261_46832442_46832776_46832911_46833045_46833222_46833440_46833537_46834181_46834288_46835991_46836164_46836281_46836373_46836633_46836862_46837304_46837411_46837487_46837735_46838824_46839043_46839385_46839583_46840874_46841083_46848548_46848742_46849150_46849554_46849857_46850058_46850178_46850315_46851164_46851669_46852610_46852766_46854105
ENSMUSG00000040329.15_1	chr3	-	832	4	FSM	ENSMUSG00000040329.15	ENST00000379113.6	849	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGGCAGTATATAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	7678754	7638914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_7639008_7642233_7642315_7669090_7669225_7678230
ENSMUSG00000040331.17_0	chr7	-	1422	11	FSM	ENSMUSG00000040331.17	ENSMUST00000160289.9	1435	11	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCACAACGTGATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	130149105	130134262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_130134423_130135306_130135397_130135499_130135592_130137253_130137303_130138712_130138808_130139891_130139983_130140740_130140841_130141543_130141696_130144409_130144541_130147624_130147703_130148721
ENSMUSG00000040339.11_0	chr3	-	5691	11	FSM	ENSMUSG00000040339.11	ENSMUST00000171143.2	5702	11	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTAGATGCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	108934921	108878321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108882659_108886160_108886231_108886996_108887125_108887390_108887611_108888459_108888556_108892627_108892732_108895626_108895674_108899941_108900059_108904350_108904381_108910615_108910737_108934500
ENSMUSG00000040345.11_0	chr10	+	1938	16	FSM	ENSMUSG00000040345.11	ENSMUST00000219026.2	1946	16	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127159583	127165812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127159700_127160213_127160329_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ENSMUSG00000040345.11_3	chr10	+	1774	15	FSM	ENSMUSG00000040345.11	ENSMUST00000069548.7	1782	15	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATACATAGACTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	127159632	127165812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127159700_127160987_127161069_127161391_127161500_127161712_127161772_127161916_127162011_127162200_127162297_127162421_127162521_127162741_127162884_127162963_127163075_127163506_127163606_127163767_127163846_127163962_127164017_127164258_127164394_127164746_127164853_127165367
ENSMUSG00000040350.17_0	chr11	+	2333	7	FSM	ENSMUSG00000040350.17	ENSMUST00000109213.9	2356	7	18	5	18	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACATTTCTAGGGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	48716984	48742009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48717107_48729663_48729760_48736258_48736494_48738341_48738365_48738851_48738968_48739399_48739436_48740304
ENSMUSG00000040351.12_0	chr5	-	6393	20	FSM	ENSMUSG00000040351.12	ENSMUST00000043551.11	6426	20	28	5	28	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCACCTCATTCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3852897	3740004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3743497_3743771_3743906_3744778_3744876_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUSG00000040351.12_2	chr5	-	6061	20	FSM	ENSMUSG00000040351.12	ENST00000265742.8	6081	20	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAAACTATTTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3852969	3740426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3743497_3743771_3743906_3744778_3744894_3750355_3750408_3751804_3751984_3752891_3753038_3754525_3754593_3754787_3754875_3756188_3756324_3763107_3763239_3772545_3772635_3777488_3777656_3779634_3779780_3782539_3782629_3783975_3784185_3797020_3797139_3805593_3805777_3819428_3819730_3822516_3822788_3852596
ENSMUSG00000040354.15_0	chr10	-	2921	21	FSM	ENSMUSG00000040354.15	ENSMUST00000037290.12	2939	21	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127147644	127132096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040354.15_18	chr10	-	2533	19	FSM	ENSMUSG00000040354.15	ENST00000628866.2	2553	19	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGTACCGTCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	127147489	127132118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127132310_127132409_127132503_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040354.15_7	chr10	-	2953	22	FSM	ENSMUSG00000040354.15	ENSMUST00000171564.8	2962	22	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCGAGCCCTCTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127147652	127132096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127132310_127132409_127132503_127132585_127132610_127132741_127132814_127133334_127133522_127133603_127133709_127133790_127133923_127135116_127135331_127135817_127135936_127136046_127136143_127136278_127136450_127138680_127138756_127140053_127140256_127141290_127141495_127141609_127141727_127144126_127144234_127144369_127144549_127144776_127144853_127145872_127146008_127146088_127146168_127146312_127146404_127147389
ENSMUSG00000040356.17_0	chr17	-	3936	28	FSM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAACCAGAGTGCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	35069182	35058230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871_35068976_35069109
ENSMUSG00000040356.17_4	chr17	-	3863	27	ISM	ENSMUSG00000040356.17	ENSMUST00000046022.16	3951	28	210	12	210	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAAACCAGAGTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	35068976	35058231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_35058582_35058666_35058808_35058972_35059192_35059271_35059383_35059485_35059697_35059833_35059961_35060043_35060195_35060417_35060523_35060646_35060785_35060919_35061058_35061787_35062019_35063313_35063425_35063590_35063804_35063979_35064077_35064143_35064291_35064624_35064732_35064803_35064889_35065002_35065150_35065497_35065644_35065842_35065972_35066118_35066301_35066383_35066438_35066722_35066798_35066879_35066995_35067083_35067202_35067300_35067411_35068871
ENSMUSG00000040359.15_0	chr4	-	4301	19	FSM	ENSMUSG00000040359.15	ENSMUST00000102994.10	4316	19	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTATTACATTTTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	25281812	25248610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_25250689_25251335_25251517_25251931_25252018_25252298_25252380_25254558_25254690_25254770_25254935_25255997_25256116_25259214_25259338_25262205_25262327_25265422_25265603_25267691_25267868_25269027_25269175_25270559_25270619_25275805_25275937_25277988_25278104_25278603_25278702_25279345_25279375_25280622_25280769_25281675
ENSMUSG00000040363.16_2	chrX	-	6197	14	FSM	ENSMUSG00000040363.16	ENST00000442018.6	6211	14	4	10	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGGAGCAAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	11927842	11902989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_11904157_11905104_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760
ENSMUSG00000040363.16_31	chrX	-	5367	15	FSM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCTGCCCCGCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	11946813	11903865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760_11927886_11946764
ENSMUSG00000040363.16_32	chrX	-	5310	14	ISM	ENSMUSG00000040363.16	ENST00000406200.4	5368	15	18935	2	-32	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCTGCCCCGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	11927878	11903866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_11904157_11905150_11905308_11905488_11905567_11906623_11906770_11907740_11907908_11913094_11913353_11913661_11913988_11914541_11914887_11915233_11915492_11921207_11921395_11921877_11921932_11922582_11925430_11926368_11926448_11927760
ENSMUSG00000040364.9_0	chr7	-	2458	4	FSM	ENSMUSG00000040364.9	ENSMUST00000040636.9	2470	4	2	10	2	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAGCAAATATTTACCCA	NA	NA	NA	NA	NA	NA	NA	NA	45343824	45327119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45328949_45333603_45333716_45334689_45334780_45343397
ENSMUSG00000040365.15_0	chr11	-	3409	6	FSM	ENSMUSG00000040365.15	ENSMUST00000047145.14	3432	6	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTTTTTTGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	48708163	48697236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48698674_48698951_48699080_48699291_48699315_48699876_48700108_48703126_48703223_48706669
ENSMUSG00000040367.3_0	chr5	+	2936	6	FSM	ENSMUSG00000040367.3	ENSMUST00000044039.2	2951	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTGAAACCTGACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3895180	3916589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3895447_3899631_3901596_3908628_3908828_3913829_3913992_3915664_3915783_3916362
ENSMUSG00000040370.14_0	chr6	+	855	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111725.8	872	3	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATTTTGAAAGAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	145156867	145161508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145157203_145160909_145160998_145161076
ENSMUSG00000040370.14_1	chr6	+	1355	3	FSM	ENSMUSG00000040370.14	ENSMUST00000111726.10	1374	3	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTTAAAGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145156887	145162252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145156979_145160909_145160998_145161076
ENSMUSG00000040370.14_2	chr6	+	2426	3	FSM	ENSMUSG00000040370.14	ENSMUST00000039729.5	2436	3	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAAACAAACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	145156883	145162657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145156979_145160247_145160998_145161076
ENSMUSG00000040370.14_7	chr6	+	1264	2	ISM	ENSMUSG00000040370.14	ENSMUST00000111721.2	1336	3	3998	13	3984	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATCTTAAAGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	145160909	145162252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_145160998_145161076
ENSMUSG00000040374.14_1	chr3	-	2029	6	FSM	ENSMUSG00000040374.14	ENSMUST00000165309.8	2038	6	3	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTAAGACTAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	5641207	5625253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5630192_5630259_5641097
ENSMUSG00000040374.14_14	chr3	-	1744	5	FSM	ENSMUSG00000040374.14	ENSMUST00000059021.10	1749	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5641294	5625559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5641097
ENSMUSG00000040374.14_20	chr3	-	1763	6	FSM	ENSMUSG00000040374.14	ENSMUST00000071280.8	1777	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCTGGGATGATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	5641180	5625569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5626825_5627728_5627793_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ENSMUSG00000040374.14_3	chr3	-	2043	5	FSM	ENSMUSG00000040374.14	ENSMUST00000164828.8	2051	5	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGTAAGACTAGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	5641208	5625253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5626825_5628224_5628333_5628679_5628790_5635546_5635690_5641097
ENSMUSG00000040374.14_6	chr3	-	1581	4	FSM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5641199	5625559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5626821_5628224_5628333_5628679_5628790_5641097
ENSMUSG00000040374.14_9	chr3	-	1481	3	ISM	ENSMUSG00000040374.14	ENSMUST00000195855.6	1587	4	12414	0	-2	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTGTGCATTTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5628791	5625559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_5626821_5628224_5628333_5628679
ENSMUSG00000040380.15_0	chr14	-	4864	3	FSM	ENSMUSG00000040380.15	ENSMUST00000063871.13	4866	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCACTGGGTAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	56121849	56116371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56120635_56120923_56121044_56121368
ENSMUSG00000040380.15_1	chr14	-	669	3	FSM	ENSMUSG00000040380.15	ENST00000555436.1	681	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTACGGAACCTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	56123447	56120277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56120635_56120923_56121044_56123255
ENSMUSG00000040383.17_0	chr2	-	4869	35	FSM	ENSMUSG00000040383.17	ENSMUST00000043160.13	4888	35	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAACATGTAAGGCATAC	NA	NA	NA	NA	NA	NA	NA	NA	114005809	113931658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113932211_113934484_113934599_113936280_113936456_113938584_113938671_113940364_113940536_113942962_113943135_113943699_113943888_113945060_113945133_113947003_113947142_113949157_113949380_113950390_113950527_113951685_113951796_113956371_113956483_113957436_113957507_113957993_113958141_113961015_113961258_113963447_113963618_113965132_113965301_113967350_113967530_113971349_113971492_113973468_113973590_113976108_113976212_113977369_113977474_113979419_113979534_113980879_113980997_113981999_113982065_113985445_113985523_113986727_113986829_113988020_113988090_113989350_113989492_113992044_113992166_113996673_113996710_114000507_114000549_114003171_114003229_114005572
ENSMUSG00000040385.8_0	chr19	+	1457	7	FSM	ENSMUSG00000040385.8	ENSMUST00000046094.6	1473	7	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	13621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCACCATAGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4242072	4245412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4242271_4242743_4242876_4243020_4243252_4243765_4243871_4244465_4244690_4244770_4244906_4244980
ENSMUSG00000040387.17_0	chr4	-	2249	8	FSM	ENSMUSG00000040387.17	ENST00000620278.1	2266	8	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTTTTTTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	24743957	24616226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24682054_24682271_24708952_24709052_24711447_24711616_24743857
ENSMUSG00000040387.17_1	chr4	-	2987	9	FSM	ENSMUSG00000040387.17	ENST00000369261.9	3006	9	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTTTTTTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	24792787	24616226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24708952_24709052_24743857_24743966_24792616
ENSMUSG00000040387.17_2	chr4	-	2783	7	FSM	ENSMUSG00000040387.17	ENST00000539200.5	2799	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTTTTTTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	24792790	24616226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24792616
ENSMUSG00000040387.17_3	chr4	-	2882	8	FSM	ENSMUSG00000040387.17	ENST00000536676.5	2898	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTTTTTTTCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	24792790	24616226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_24617547_24626896_24626987_24629155_24629353_24632642_24632702_24649539_24650267_24682054_24682271_24708952_24709052_24792616
ENSMUSG00000040389.16_1	chr3	+	3983	14	FSM	ENSMUSG00000040389.16	ENST00000361054.7	3999	14	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCAATCTGTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108498738	108553027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108498914_108517192_108517360_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040389.16_7	chr3	+	4072	15	FSM	ENSMUSG00000040389.16	ENST00000369962.8	4083	15	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCAATCTGTCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	108498733	108553027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108498914_108517192_108517360_108518671_108518756_108521648_108521734_108525805_108526609_108530641_108530766_108531872_108532052_108534518_108534777_108537007_108537084_108540376_108540535_108544306_108544477_108545208_108545380_108545941_108546074_108550377_108550597_108551761
ENSMUSG00000040390.14_0	chr7	-	3654	10	FSM	ENSMUSG00000040390.14	ENSMUST00000036453.14	3682	10	23	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAAGCTTGGCTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	27373996	27355804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27356412_27357276_27357958_27358254_27358368_27358445_27358600_27360959_27361077_27362649_27362897_27363822_27363999_27364374_27364524_27367773_27367955_27372767
ENSMUSG00000040396.13_0	chr8	+	5181	3	FSM	ENSMUSG00000040396.13	ENSMUST00000139793.8	5191	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAGTAGTGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	10027709	10042148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_10028020_10032863_10032971_10037384
ENSMUSG00000040396.13_1	chr8	+	5049	2	FSM	ENSMUSG00000040396.13	ENSMUST00000048216.6	5074	2	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAGTAGTGAGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	10027734	10042148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_10028020_10037384
ENSMUSG00000040407.19_0	chr5	+	13107	48	FSM	ENSMUSG00000040407.19	ENSMUST00000044492.10	13123	48	12	4	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGAAACAAACAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3978285	4131306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3978491_3998680_3998897_4001689_4001735_4004791_4004963_4006156_4006313_4007623_4007801_4010111_4012458_4018579_4018794_4020663_4020738_4021901_4022038_4022755_4022842_4025598_4025711_4026127_4026327_4031117_4031215_4042045_4042139_4051404_4051759_4053560_4053783_4054802_4054944_4055409_4055514_4058343_4058550_4063849_4064080_4078373_4078537_4079839_4080053_4082680_4082914_4084747_4084868_4088528_4088706_4089238_4089344_4093917_4094071_4094798_4094979_4095897_4096942_4100154_4100644_4101035_4101100_4101209_4101311_4105160_4105353_4105591_4105769_4108435_4108581_4110281_4110496_4111137_4111289_4114070_4114740_4115180_4115387_4115804_4115911_4117739_4117923_4119006_4119208_4120298_4120532_4122614_4122701_4127185_4127316_4127827_4127968_4129658
ENSMUSG00000040410.15_0	chr4	+	2537	9	FSM	ENSMUSG00000040410.15	ENSMUST00000039234.10	2546	9	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTTTCTTTGTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	22357546	22434086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_22357682_22375660_22375771_22376495_22377078_22385906_22386253_22390676_22390922_22403531_22403746_22422716_22422789_22427149_22427463_22433566
ENSMUSG00000040412.18_0	chr3	-	2872	20	FSM	ENSMUSG00000040412.18	ENST00000529753.5	2888	20	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAACCCTGCGCTCCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	108443781	108365641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108365785_108367000_108367167_108368254_108368434_108368511_108368639_108370205_108370308_108370785_108370883_108371570_108371752_108372921_108373096_108375068_108375333_108376843_108376982_108377217_108377324_108378663_108378755_108379284_108379414_108380038_108380217_108388601_108388686_108389097_108389179_108389646_108389795_108396145_108396339_108399314_108399436_108443611
ENSMUSG00000040414.9_0	chr19	-	1496	4	FSM	ENSMUSG00000040414.9	ENSMUST00000046038.9	1535	4	24	15	24	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGCCTTTAAACGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43663296	43652254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_43653083_43654210_43654268_43655353_43655583_43662914
ENSMUSG00000040415.16_0	chr10	-	1766	6	FSM	ENSMUSG00000040415.16	ENST00000551632.1	1772	6	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTATGCCACACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	127031587	127026253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598_127029673_127030278_127030343_127031562
ENSMUSG00000040415.16_1	chr10	-	1740	5	ISM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	1237	7	-6	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTATGCCACACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	127030341	127026253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598_127029673_127030278
ENSMUSG00000040415.16_2	chr10	-	1918	6	FSM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTATGCCACACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	127031578	127026253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598_127029673_127030278_127030504_127031562
ENSMUSG00000040415.16_3	chr10	-	1680	4	ISM	ENSMUSG00000040415.16	ENSMUST00000130855.8	1925	6	1903	7	660	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTATGCCACACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	127029675	127026253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_127026909_127027204_127027423_127028477_127029208_127029598
ENSMUSG00000040415.16_4	chr10	-	1902	5	ISM	ENSMUSG00000040415.16	ENSMUST00000038217.14	1944	6	1090	11	-153	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAACTCTATGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	127030488	127026257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278
ENSMUSG00000040415.16_6	chr10	-	1974	6	FSM	ENSMUSG00000040415.16	ENST00000548804.5	2006	6	27	5	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTATGCCACACCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	127031776	127026253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127026909_127027204_127027423_127028477_127029227_127029598_127029673_127030278_127030343_127031562
ENSMUSG00000040415.16_8	chr10	-	1987	5	FSM	ENSMUSG00000040415.16	ENSMUST00000116229.2	1994	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGGATGGGGTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	127031596	127026517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127027423_127028477_127029227_127029598_127029673_127030278_127030504_127031562
ENSMUSG00000040420.16_0	chr15	+	2727	12	FSM	ENSMUSG00000040420.16	ENSMUST00000164787.8	2744	12	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTAGGGGGTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23036556	23474495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_23036669_23173536_23174016_23226768_23227064_23259694_23259815_23366938_23367107_23382868_23383057_23400640_23400895_23410769_23410907_23436535_23436658_23446063_23446182_23460401_23460654_23474013
ENSMUSG00000040423.12_0	chr1	+	10994	20	FSM	ENSMUSG00000040423.12	ENSMUST00000161609.8	11006	20	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAACAGTGTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	160733991	160802540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160734270_160757533_160757915_160765681_160765803_160767564_160767805_160768388_160768565_160770097_160770299_160774103_160774237_160775876_160775996_160777791_160777905_160778410_160778693_160779184_160779400_160782353_160782722_160783384_160783550_160786970_160787124_160789840_160790055_160791048_160791140_160791277_160791411_160792519_160792691_160793242_160793359_160795216
ENSMUSG00000040428.20_0	chr7	+	2569	20	FSM	ENSMUSG00000040428.20	ENSMUST00000209517.2	2577	20	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTCTGTGGTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	45179528	45203645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45179558_45179992_45180083_45181681_45181790_45183761_45183835_45183930_45184032_45184167_45184278_45187080_45187297_45187621_45187902_45188629_45188714_45189903_45189952_45190254_45190336_45190478_45190629_45193369_45193469_45197373_45197515_45198483_45198584_45198653_45198731_45199227_45199390_45202668_45202719_45202992_45203106_45203188
ENSMUSG00000040428.20_1	chr7	+	2545	19	ISM	ENSMUSG00000040428.20	ENSMUST00000209517.2	2577	20	467	0	1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTTGTGACATTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45179995	45203653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45180083_45181681_45181790_45183761_45183835_45183930_45184032_45184167_45184278_45187080_45187297_45187621_45187902_45188629_45188714_45189903_45189952_45190254_45190336_45190478_45190629_45193369_45193469_45197373_45197515_45198483_45198584_45198653_45198731_45199227_45199390_45202668_45202719_45202992_45203106_45203188
ENSMUSG00000040429.7_0	chr5	-	1365	2	FSM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	3	8	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATTACATTTATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3943930	3940588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3941898_3943874
ENSMUSG00000040429.7_1	chr5	-	1298	1	ISM	ENSMUSG00000040429.7	ENSMUST00000044746.5	1376	2	2048	7	2022	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTACATTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	3941885	3940587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_3940600_3941900
ENSMUSG00000040429.7_2	chr5	-	2382	2	FSM	ENSMUSG00000040429.7	ENSMUST00000117463.2	2413	2	18	13	18	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATATTTAAGATTACATT	NA	NA	NA	NA	NA	NA	NA	NA	3943889	3940596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_3941898_3942808
ENSMUSG00000040430.19_0	chr11	-	6315	9	NIC	ENSMUSG00000040430.19	novel	6329	10	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTTCCGAGTGTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	107361525	107098723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_107103485_107107503_107107623_107117056_107117121_107125172_107125329_107142847_107142944_107187024_107187097_107212412_107212502_107228237_107228387_107360716
ENSMUSG00000040433.17_0	chr9	-	7393	6	FSM	ENSMUSG00000040433.17	ENSMUST00000152594.8	7406	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTACATTAAGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96634877	96564828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96571083_96600262_96600363_96613344_96613796_96614300_96614367_96633354_96633437_96634437
ENSMUSG00000040435.13_0	chr7	-	2316	3	FSM	ENSMUSG00000040435.13	ENSMUST00000042105.11	2333	3	8	9	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATAAACTCTTACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45175684	45172349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45172747_45173162_45174816_45175418
ENSMUSG00000040441.13_0	chr10	-	3103	17	NIC	ENSMUSG00000040441.13	novel	3130	18	NA	NA	10	-13	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAGGAAAAACTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	127016504	127007392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_127008446_127009143_127009251_127009350_127009406_127009492_127009576_127009777_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493_127015605_127016099
ENSMUSG00000040441.13_4	chr10	-	1776	14	FSM	ENSMUSG00000040441.13	ENST00000665594.1	1790	14	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAGGGAGTGGTCAAAC	NA	NA	NA	NA	NA	NA	NA	NA	127016382	127009494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127009576_127009765_127009895_127009967_127010038_127010152_127010260_127010674_127010771_127010853_127010932_127012440_127012555_127012675_127012824_127012955_127013039_127013806_127013960_127014211_127014377_127014597_127014756_127015493_127015605_127016099
ENSMUSG00000040446.5_0	chr18	-	4284	7	FSM	ENSMUSG00000040446.5	ENSMUST00000046206.5	4299	7	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTTTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24663248	24618018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24621389_24639890_24640067_24640161_24640289_24641050_24641149_24641226_24641334_24642849_24642980_24662972
ENSMUSG00000040451.19_0	chr19	-	3244	6	FSM	ENSMUSG00000040451.19	ENSMUST00000151289.9	3262	6	9	9	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAAAGTATGTGGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	32188404	32100136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32188227
ENSMUSG00000040451.19_1	chr19	-	4004	10	FSM	ENSMUSG00000040451.19	ENSMUST00000142618.8	4036	10	15	17	15	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTTATACTGAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	32326701	32100146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32101925_32102625_32102793_32106940_32107095_32120145_32120264_32136923_32137764_32200908_32200991_32225393_32225437_32237375_32237498_32266940_32267032_32326092
ENSMUSG00000040455.18_0	chr4	+	5853	17	FSM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCCTATTTTAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	21776271	21837864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_21776318_21780340_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ENSMUSG00000040455.18_1	chr4	+	5808	16	ISM	ENSMUSG00000040455.18	ENSMUST00000040429.12	5861	17	4075	1	4075	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTTCCCTGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	21780346	21837871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_21780451_21781735_21781909_21782882_21782987_21784692_21784794_21796785_21796929_21797294_21797391_21798604_21798736_21804225_21804314_21810741_21810824_21815306_21815399_21816881_21816939_21824416_21825078_21826153_21826252_21830416_21830504_21832163_21832318_21834234
ENSMUSG00000040459.12_0	chr8	-	3178	4	FSM	ENSMUSG00000040459.12	ENSMUST00000048545.10	3197	4	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGCTTGGTGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	8740507	8715079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_8717417_8731383_8731468_8733747_8733974_8739976
ENSMUSG00000040462.14_0	chr10	-	2437	14	FSM	ENSMUSG00000040462.14	ENSMUST00000080975.6	2458	14	13	8	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGTCAAGCCATCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	126956981	126931526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126932242_126932498_126932612_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUSG00000040462.14_2	chr10	-	2618	15	FSM	ENSMUSG00000040462.14	ENSMUST00000164259.9	2627	15	6	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGCCATCAGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126956994	126931523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126932242_126932498_126932612_126932783_126932949_126933800_126933991_126934209_126934507_126934699_126934786_126935271_126935327_126935481_126935577_126935758_126935861_126935953_126936165_126954967_126955067_126955271_126955349_126955472_126955537_126956237_126956415_126956825
ENSMUSG00000040463.17_0	chr11	+	4336	26	FSM	ENSMUSG00000040463.17	ENSMUST00000045633.6	4358	26	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGGAGGCAACACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	72332194	72342586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72332402_72332503_72332600_72333225_72333310_72333395_72333471_72333571_72333680_72334301_72334478_72334566_72334735_72334828_72334947_72335507_72335804_72336001_72336113_72336433_72336560_72336719_72336888_72336983_72337084_72337797_72337895_72337974_72338127_72338378_72338466_72338555_72338709_72338781_72338953_72339042_72339204_72339557_72339790_72339868_72340001_72340086_72340156_72340545_72340660_72340818_72340921_72341451_72341601_72341702
ENSMUSG00000040464.16_0	chr5	-	2956	10	FSM	ENSMUSG00000040464.16	ENSMUST00000115441.9	2972	10	8	8	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTAATCTAGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5609530	5587461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5589452_5592301_5592426_5593290_5593369_5594065_5594174_5596352_5596406_5597926_5598001_5605237_5605383_5606064_5606157_5607212_5607407_5609432
ENSMUSG00000040466.17_0	chr7	+	1012	5	FSM	ENSMUSG00000040466.17	ENSMUST00000037399.16	1028	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGTTGATTGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	27147411	27165562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27161991_27162121_27165144
ENSMUSG00000040466.17_15	chr7	+	495	3	ISM	ENSMUSG00000040466.17	ENST00000595483.5	574	4	11133	5	6839	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTCAGGAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	27158681	27165385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_27158846_27158987_27159078_27165144
ENSMUSG00000040466.17_9	chr7	+	566	4	FSM	ENSMUSG00000040466.17	ENST00000595483.5	574	4	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCTTTCAGGAAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	27147551	27165385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27147622_27158680_27158846_27158987_27159078_27165144
ENSMUSG00000040472.16_14	chr14	-	1883	17	FSM	ENSMUSG00000040472.16	ENSMUST00000163889.3	1886	17	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGCCAAGCTACCATTA	NA	NA	NA	NA	NA	NA	NA	NA	55959717	55953781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300_55959358_55959657
ENSMUSG00000040472.16_20	chr14	-	1130	9	FSM	ENSMUSG00000040472.16	ENST00000560777.5	1147	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAATAAAGACTGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	55957955	55953809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956995_55957164_55957252_55957337_55957760
ENSMUSG00000040472.16_6	chr14	-	2496	16	FSM	ENSMUSG00000040472.16	ENSMUST00000169237.8	2547	16	34	17	34	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATAAATAAATCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	55959599	55953350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55953996_55954624_55954713_55954960_55955075_55955902_55956020_55956119_55956209_55956320_55956410_55956547_55956600_55956696_55956803_55956886_55956989_55957080_55957164_55957252_55957337_55957760_55957965_55958232_55958421_55958592_55958718_55959051_55959163_55959300
ENSMUSG00000040473.16_0	chr5	-	4942	23	FSM	ENSMUSG00000040473.16	ENSMUST00000054865.13	4956	23	5	9	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCAGAATTAGCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	5714234	5629286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ENSMUSG00000040473.16_1	chr5	-	4356	19	FSM	ENSMUSG00000040473.16	ENSMUST00000196165.5	4408	19	45	7	45	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATCAGAATTAGCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	5714163	5629288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5631367_5631903_5632009_5632441_5632529_5634650_5634849_5636355_5636433_5637140_5637279_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690128_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787_5707848_5713907
ENSMUSG00000040473.16_2	chr5	-	2281	19	FSM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAAAGTAAGCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	5707847	5634658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690182_5690228_5694423_5694501_5696935_5697046_5699789_5699856_5707787
ENSMUSG00000040473.16_5	chr5	-	2216	18	ISM	ENSMUSG00000040473.16	ENST00000497910.5	2292	19	8000	8	8000	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAAAAGTAAGCATATGC	NA	NA	NA	NA	NA	NA	NA	NA	5699850	5634658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_5634849_5636355_5636433_5637140_5637279_5639119_5639313_5643771_5643854_5645920_5646040_5654273_5654393_5663685_5663851_5667168_5667386_5668947_5669070_5669166_5669216_5671919_5672044_5675749_5675928_5676008_5676159_5690182_5690228_5694423_5694501_5696935_5697046_5699789
ENSMUSG00000040479.13_0	chr2	-	3499	31	FSM	ENSMUSG00000040479.13	ENSMUST00000099709.10	3512	31	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTTTTCTTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	91806196	91763168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91805911
ENSMUSG00000040479.13_2	chr2	-	3584	31	FSM	ENSMUSG00000040479.13	ENSMUST00000028667.10	3584	31	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	91794002	91763170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91793630
ENSMUSG00000040479.13_4	chr2	-	3374	31	FSM	ENSMUSG00000040479.13	ENSMUST00000239257.2	3393	31	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTTTTCTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	91795926	91763170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91795764
ENSMUSG00000040479.13_7	chr2	-	4161	32	FSM	ENSMUSG00000040479.13	ENSMUST00000111303.2	4169	32	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTGTTTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	91780764	91763171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91763871_91764087_91764188_91764400_91764435_91764510_91764632_91765160_91765205_91765425_91765458_91766166_91766307_91766869_91766911_91767046_91767117_91767202_91767283_91767398_91767500_91767782_91767983_91768312_91768425_91768506_91768581_91768673_91768737_91768853_91768910_91769061_91769141_91769668_91769810_91769895_91770010_91770097_91770159_91770254_91770338_91770592_91770689_91770949_91771022_91771102_91771220_91771309_91771382_91772634_91772704_91772972_91773030_91774366_91774445_91774718_91774815_91775105_91775215_91775518_91776270_91780565
ENSMUSG00000040481.18_13	chr11	-	10486	31	FSM	ENSMUSG00000040481.18	ENST00000342579.8	10504	31	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTAAATAATCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107022398	106924708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106926666_106931051_106931239_106933500_106933586_106934458_106934652_106935317_106935492_106937825_106938170_106943614_106943841_106944048_106944132_106945680_106946145_106946697_106946933_106949459_106949678_106951297_106951407_106952509_106952662_106953361_106953609_106956493_106956537_106956771_106956923_106957952_106958082_106959100_106959226_106963508_106965817_106967347_106967528_106968485_106968625_106969345_106969476_106971548_106971681_106972041_106972398_106973338_106973527_106977537_106977724_106985827_106986017_106986541_106986752_106990391_106990616_107001638_107002462_107022099
ENSMUSG00000040481.18_49	chr11	-	436	3	FSM	ENSMUSG00000040481.18	ENST00000579873.1	453	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAATGGGTAAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	106935484	106933509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106933586_106934458_106934652_106935317
ENSMUSG00000040481.18_50	chr11	-	584	2	FSM	ENSMUSG00000040481.18	ENST00000675608.1	599	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAGGTAACCACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	107022737	107022106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_107022281_107022327
ENSMUSG00000040482.17_0	chr17	+	1425	7	FSM	ENSMUSG00000040482.17	ENSMUST00000180043.8	1447	7	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGGGTCTCTTGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35056009	35058155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35056193_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUSG00000040482.17_2	chr17	+	1504	7	FSM	ENSMUSG00000040482.17	ENSMUST00000046244.15	1519	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATACTCCAAGCACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	35056003	35058203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35056218_35056368_35056731_35056876_35057113_35057201_35057422_35057523_35057660_35057788_35057884_35057962
ENSMUSG00000040483.16_1	chr11	+	2582	6	FSM	ENSMUSG00000040483.16	ENSMUST00000146233.8	2597	6	10	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTAGAGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	72192465	72204554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72192536_72194152_72194289_72195491_72195688_72197389_72197479_72199432_72199751_72202781
ENSMUSG00000040483.16_2	chr11	+	2512	5	ISM	ENSMUSG00000040483.16	ENSMUST00000146233.8	2597	6	1696	6	1687	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTTAGAGCTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	72194151	72204553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_72194289_72195491_72195688_72197389_72197479_72199432_72199751_72202781
ENSMUSG00000040488.19_0	chr7	-	5378	33	FSM	ENSMUSG00000040488.19	ENSMUST00000038618.13	5386	33	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTCTGCCTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	27037110	27004561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27034261_27034372_27034821_27034961_27035077_27035137_27036852
ENSMUSG00000040488.19_1	chr7	-	5098	30	FSM	ENSMUSG00000040488.19	ENSMUST00000121175.8	5118	30	18	2	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCGGCCTCTGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	27033070	27004566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ENSMUSG00000040488.19_2	chr7	-	5356	32	NIC	ENSMUSG00000040488.19	novel	5377	33	NA	NA	19	-7	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTGTACTTTCGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	27037098	27004573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026938_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779_27033049_27035095_27035137_27036852
ENSMUSG00000040488.19_4	chr7	-	4673	30	FSM	ENSMUSG00000040488.19	ENST00000396819.8	4684	30	8	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGGCGCCAAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	27033040	27004821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27004976_27005491_27005645_27005986_27006368_27007192_27007346_27008345_27008493_27008710_27008840_27009605_27009678_27009945_27010213_27013661_27013809_27018835_27018962_27019049_27019182_27021446_27021579_27021713_27021837_27022235_27022362_27022566_27022696_27023511_27023632_27023718_27023845_27024443_27024687_27025102_27025229_27025911_27026038_27026116_27026249_27026685_27026798_27027062_27027213_27027610_27027776_27028164_27028288_27028392_27028468_27028803_27028907_27028995_27029244_27029551_27029744_27032779
ENSMUSG00000040489.6_0	chr11	+	2586	4	FSM	ENSMUSG00000040489.6	ENST00000311371.9	2614	4	14	14	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATGAAAATGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45871041	45908808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_45872201_45874145_45874386_45875543_45875724_45907801
ENSMUSG00000040506.17_0	chr2	+	5001	19	FSM	ENSMUSG00000040506.17	ENSMUST00000099712.10	5021	19	19	1	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	91560497	91749193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91602783_91603055_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUSG00000040506.17_1	chr2	+	5045	17	FSM	ENSMUSG00000040506.17	ENSMUST00000111316.9	5063	17	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	91560546	91749193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUSG00000040506.17_2	chr2	+	5190	18	FSM	ENSMUSG00000040506.17	ENSMUST00000045705.14	5203	18	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGCTCCTGCTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	91560581	91749193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91560725_91596791_91597046_91597401_91597461_91598034_91598219_91599259_91599433_91601255_91601323_91602635_91604093_91635368_91635456_91640374_91640555_91654804_91654886_91655596_91655698_91706060_91706172_91715945_91716135_91717168_91717324_91730842_91730983_91740641_91740735_91741758_91741953_91747671
ENSMUSG00000040511.15_0	chr7	-	2886	8	FSM	ENSMUSG00000040511.15	ENSMUST00000043517.8	2905	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTACTCCATTGTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	19655073	19637509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19639118_19639703_19639739_19643105_19643229_19644529_19644682_19648662_19648790_19650798_19651096_19652486_19652835_19654877
ENSMUSG00000040520.8_0	chr4	-	4857	5	FSM	ENSMUSG00000040520.8	ENSMUST00000041374.8	4867	5	6	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACTGGAAATCTATTCAT	NA	NA	NA	NA	NA	NA	NA	NA	26346885	26324509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_26328309_26329085_26329163_26336620_26336731_26340416_26340999_26346596
ENSMUSG00000040520.8_2	chr4	-	1351	3	FSM	ENSMUSG00000040520.8	ENST00000683151.1	1368	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTATCACGTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	26340988	26327640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_26328309_26336620_26336728_26340412
ENSMUSG00000040520.8_3	chr4	-	1427	4	FSM	ENSMUSG00000040520.8	ENST00000358812.9	1445	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTATCACGTCTACTA	NA	NA	NA	NA	NA	NA	NA	NA	26340987	26327640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_26328309_26329085_26329163_26336620_26336728_26340412
ENSMUSG00000040521.12_0	chr10	-	1191	6	FSM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGCTTAATGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126866700	126858206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331_126866506_126866612
ENSMUSG00000040521.12_1	chr10	-	1104	5	ISM	ENSMUSG00000040521.12	ENSMUST00000040560.11	1206	6	203	6	162	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGCTTAATGTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	126866506	126858206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_126858796_126860804_126860893_126864233_126864357_126865422_126865552_126866331
ENSMUSG00000040524.10_0	chr9	-	7764	10	FSM	ENSMUSG00000040524.10	ENSMUST00000159109.2	7777	10	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAATCACAAATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	65734846	65599685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65602977_65603424_65603504_65604313_65604531_65604775_65604952_65608103_65608471_65609553_65611901_65613372_65613461_65638257_65638484_65701903_65702778_65734747
ENSMUSG00000040528.16_0	chr11	+	1214	8	FSM	ENSMUSG00000040528.16	ENSMUST00000147326.9	1234	8	7	13	-7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAACCATATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106642058	106659607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106642216_106642459_106642502_106645607_106645878_106652008_106652123_106654681_106654775_106656047_106656111_106657778_106657874_106659227
ENSMUSG00000040528.16_1	chr11	+	1329	7	FSM	ENSMUSG00000040528.16	ENSMUST00000086353.11	1348	7	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106642071	106658381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106642216_106642459_106642502_106645607_106645878_106652008_106652123_106654681_106654775_106656047_106656111_106657778
ENSMUSG00000040528.16_2	chr11	+	972	7	FSM	ENSMUSG00000040528.16	ENSMUST00000183111.8	982	7	6	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACCTCAGTGTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	106642096	106659541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106642216_106642459_106642502_106645607_106645878_106654681_106654775_106656047_106656111_106657778_106657850_106659227
ENSMUSG00000040528.16_3	chr11	+	1489	7	FSM	ENSMUSG00000040528.16	ENSMUST00000106794.9	1514	7	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGAGAGATTTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106642110	106658583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106642216_106642459_106642502_106645607_106645878_106652011_106652123_106654681_106654775_106656047_106656111_106657778
ENSMUSG00000040532.15_0	chr5	+	1476	6	FSM	ENSMUSG00000040532.15	ENSMUST00000046999.12	1493	6	10	7	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135038162	135041022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135038694_135038835_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_3	chr5	+	1462	5	FSM	ENSMUSG00000040532.15	ENSMUST00000154469.8	1473	5	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCTGGATCCGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	135038318	135041022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135038972_135039740_135039915_135040063_135040235_135040337_135040520_135040740
ENSMUSG00000040532.15_4	chr5	+	578	4	FSM	ENSMUSG00000040532.15	ENST00000395147.9	599	4	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCATGGATGCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	135038846	135040837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135038972_135039740_135039915_135040337_135040520_135040740
ENSMUSG00000040532.15_5	chr5	+	399	3	FSM	ENSMUSG00000040532.15	ENST00000458339.6	417	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATGGATGCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	135038844	135040838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135038972_135039740_135039915_135040740
ENSMUSG00000040537.18_11	chr5	-	2501	27	FSM	ENSMUSG00000040537.18	ENST00000398201.8	2519	27	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAAAGGTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	8417354	8142324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_8142407_8142730_8142832_8145072_8145181_8161874_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200
ENSMUSG00000040537.18_3	chr5	-	2720	29	FSM	ENSMUSG00000040537.18	ENST00000265727.11	2730	29	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGACGATTTCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	8417353	8128595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_8128707_8132145_8132270_8142339_8142407_8142730_8142832_8145072_8145181_8161874_8161986_8166544_8166660_8167588_8167758_8171047_8171168_8177326_8177433_8180208_8180273_8180484_8180536_8182398_8182480_8184511_8184605_8184812_8184885_8186805_8186906_8191718_8191771_8193041_8193133_8194220_8194306_8195552_8195720_8196454_8196527_8199207_8199283_8202378_8202450_8208826_8208897_8210735_8210800_8217326_8217410_8282609_8282677_8379979_8380057_8417200
ENSMUSG00000040548.17_0	chr11	-	4929	12	FSM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	0	10	0	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATGTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106503726	106392965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ENSMUSG00000040548.17_1	chr11	-	4879	11	ISM	ENSMUSG00000040548.17	ENST00000258991.7	4939	12	44280	10	10493	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAAGCATGTTATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106459446	106392965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435264_106437489_106437830_106439539_106439741_106457790
ENSMUSG00000040548.17_14	chr11	-	4924	12	FSM	ENSMUSG00000040548.17	ENSMUST00000042780.14	4934	12	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTCAAACACCAGACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	106503751	106392977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106394545_106397692_106397814_106402727_106402938_106404412_106404539_106410707_106410841_106420087_106420188_106424696_106424844_106434997_106435246_106437489_106437830_106439539_106439741_106457790_106459454_106503683
ENSMUSG00000040549.17_0	chr2	+	6651	44	FSM	ENSMUSG00000040549.17	ENSMUST00000111338.10	6665	44	5	9	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTATACCCATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91357111	91451000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91357196_91376666_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040549.17_16	chr2	+	6567	43	FSM	ENSMUSG00000040549.17	ENSMUST00000099716.11	6574	43	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTATACCCATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91376666	91451000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91436590_91436771_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040549.17_22	chr2	+	6360	42	FSM	ENSMUSG00000040549.17	ENSMUST00000111337.3	6384	42	16	8	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACTATACCCATTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91376693	91451000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91376761_91379118_91379313_91380896_91381104_91385611_91385784_91386844_91386978_91387919_91388021_91389393_91389508_91391151_91391257_91393098_91393189_91393293_91393459_91394664_91394794_91395965_91396149_91398481_91398596_91398981_91399093_91400524_91400618_91402692_91402879_91403317_91403413_91406360_91406419_91406507_91406634_91407908_91408049_91408379_91408555_91409767_91409882_91411454_91411584_91416066_91416262_91416582_91416719_91419013_91419103_91422010_91422137_91425027_91425178_91425655_91425860_91426032_91426169_91426706_91426901_91429550_91429724_91430985_91431160_91431350_91431472_91437789_91437978_91443084_91443161_91445317_91445507_91445586_91445725_91446138_91446223_91446645_91446806_91450032_91450185_91450326
ENSMUSG00000040550.18_0	chr4	-	3245	7	FSM	ENSMUSG00000040550.18	ENSMUST00000236953.2	3257	7	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACATGTGTATATTCA	NA	NA	NA	NA	NA	NA	NA	NA	14826579	14809510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040550.18_1	chr4	-	1314	8	FSM	ENSMUSG00000040550.18	ENST00000615618.1	1328	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGCAGTTGTAGAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	14826501	14811502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_14811749_14812452_14812560_14815602_14815665_14818175_14818489_14819975_14820115_14822691_14822773_14825498_14825654_14826290
ENSMUSG00000040552.9_0	chr6	-	4295	2	FSM	ENSMUSG00000040552.9	ENSMUST00000042081.9	4305	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACAAGGTCAGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	122833118	122824104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122828224_122832942
ENSMUSG00000040554.11_0	chr11	-	688	4	FSM	ENSMUSG00000040554.11	ENST00000250087.9	703	4	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGGCTGGATTCCACT	NA	NA	NA	NA	NA	NA	NA	NA	71927605	71920081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_71920283_71921032_71921175_71921251_71921429_71927437
ENSMUSG00000040554.11_4	chr11	-	651	4	FSM	ENSMUSG00000040554.11	ENST00000571740.5	668	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGCAGCCCTGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	71927606	71921034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_71921175_71921251_71921405_71922242_71922432_71927437
ENSMUSG00000040557.15_0	chr5	+	2807	6	FSM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTTTTTACATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	134961221	134971490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_1	chr5	+	1788	5	FSM	ENSMUSG00000040557.15	ENSMUST00000111221.9	1796	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACACAGCAACAATAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	134961226	134970569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134961265_134961475_134961702_134962326_134962456_134963142_134963279_134969310
ENSMUSG00000040557.15_2	chr5	+	1783	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111219.8	1790	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGCAACAATAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	134961226	134970570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_3	chr5	+	1678	5	FSM	ENSMUSG00000040557.15	ENSMUST00000068617.12	1685	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGCAACAATAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	134961238	134970570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134961265_134961574_134961702_134962326_134962456_134963142_134963279_134969310
ENSMUSG00000040557.15_4	chr5	+	1378	6	FSM	ENSMUSG00000040557.15	ENSMUST00000111218.8	1387	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACCAGATACAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134961245	134970047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134961303_134961475_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_5	chr5	+	2760	5	ISM	ENSMUSG00000040557.15	ENSMUST00000047196.14	2808	6	258	1	234	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTTTTTTACATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	134961479	134971490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_134961702_134962326_134962456_134963142_134963279_134964632_134964726_134969310
ENSMUSG00000040557.15_6	chr5	+	1653	4	ISM	ENSMUSG00000040557.15	ENSMUST00000068617.12	1685	5	335	7	328	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGCAACAATAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	134961573	134970570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_134961702_134962326_134962456_134963142_134963279_134969310
ENSMUSG00000040560.11_0	chr18	+	6354	28	FSM	ENSMUSG00000040560.11	ENST00000254442.8	6369	28	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTGAAGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	63853291	64122808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63924866_63924963_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040560.11_5	chr18	+	6254	27	FSM	ENSMUSG00000040560.11	ENST00000357574.7	6273	27	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTGAAGTGTACT	NA	NA	NA	NA	NA	NA	NA	NA	63853295	64122808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_63853461_63853827_63853935_63857191_63857271_63860689_63860865_63861509_63861587_63863160_63863281_63868649_63868796_63869474_63869578_63871813_63871956_63872175_63872425_63873097_63873319_63888106_63888303_63893641_63893857_63910598_63911369_63912939_63913029_63927295_63927415_63929228_63929353_63958195_63958310_63998355_63998578_64037100_64037288_64057882_64058001_64059649_64059800_64060336_64060420_64068919_64069020_64112390_64112496_64120226_64121933_64122436
ENSMUSG00000040562.13_0	chr3	-	1050	8	FSM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACATTTGTTCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107893762	107889024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349_107893426_107893673
ENSMUSG00000040562.13_1	chr3	-	962	7	ISM	ENSMUSG00000040562.13	ENSMUST00000012348.9	1064	8	343	7	250	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACATTTGTTCAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	107893426	107889024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_107889455_107891251_107891363_107891444_107891541_107892364_107892466_107892562_107892645_107892933_107892999_107893349
ENSMUSG00000040563.14_0	chr9	+	2614	10	FSM	ENSMUSG00000040563.14	ENSMUST00000046371.13	2626	10	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAAGTTTGGCCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	21848336	21860196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21848455_21849690_21849861_21850594_21850675_21851980_21852170_21852297_21852434_21854646_21854919_21855691_21855869_21858241_21858365_21858676_21858729_21858899
ENSMUSG00000040565.9_0	chr19	+	7190	38	FSM	ENSMUSG00000040565.9	ENSMUST00000099494.4	7204	38	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAATTGTAAAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36903483	36990143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36903802_36922611_36922736_36926467_36926583_36928433_36928578_36933770_36933935_36935772_36935910_36939038_36939169_36939830_36939900_36943017_36943108_36943891_36943988_36944075_36944253_36946455_36946597_36947313_36947439_36950297_36950419_36955714_36955820_36957976_36958127_36958386_36958530_36959046_36959222_36960848_36961053_36963854_36964282_36965380_36965572_36966275_36966430_36966787_36966898_36968122_36968325_36969835_36969985_36971669_36971823_36971990_36972113_36972198_36972367_36973929_36974008_36974905_36975036_36977491_36977634_36977716_36977848_36979813_36979940_36980887_36981041_36981831_36982044_36986979_36987140_36987411_36987583_36988660
ENSMUSG00000040584.9_0	chr5	+	4984	28	FSM	ENSMUSG00000040584.9	ENSMUST00000047753.5	4997	28	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGATTCTAACAGATAATG	NA	NA	NA	NA	NA	NA	NA	NA	8710076	8798562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8710223_8710661_8710733_8714545_8714595_8724682_8724843_8733383_8733436_8735220_8735413_8736126_8736299_8744065_8744191_8748485_8748658_8751608_8751723_8751866_8751978_8752152_8752279_8752368_8752573_8752792_8752964_8763186_8763349_8764886_8765064_8765741_8765889_8768978_8769087_8769990_8770069_8773158_8773243_8776772_8776977_8782291_8782393_8783598_8783740_8787614_8787772_8788694_8788893_8790408_8790616_8796508_8796656_8797354
ENSMUSG00000040586.9_0	chrX	-	4430	23	FSM	ENSMUSG00000040586.9	ENSMUST00000049501.9	4453	23	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAACTTATAACTCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	165223686	165173037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_165174055_165174886_165174955_165175413_165175567_165176172_165176328_165183915_165184030_165186537_165186636_165188421_165188579_165188992_165189605_165191584_165191697_165192483_165192615_165193601_165193792_165194811_165194904_165196296_165196371_165197971_165198092_165207971_165208079_165209815_165209990_165210163_165210301_165211523_165211632_165214684_165214716_165214797_165214867_165218330_165218532_165223024_165223124_165223275
ENSMUSG00000040591.19_3	chr2	-	2889	9	FSM	ENSMUSG00000040591.19	ENSMUST00000064652.14	2896	9	4	3	4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGGGGAAACGACAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	91274963	91105415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91107480_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ENSMUSG00000040591.19_4	chr2	-	2819	8	ISM	ENSMUSG00000040591.19	ENSMUST00000064652.14	2896	9	22670	7	22670	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGTGTGGGGAAACGACA	NA	NA	NA	NA	NA	NA	NA	NA	91252297	91105419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_91107480_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210
ENSMUSG00000040591.19_5	chr2	-	1964	9	FSM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGGAGTCATGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91274983	91108183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210_91252314_91274913
ENSMUSG00000040591.19_6	chr2	-	1894	8	ISM	ENSMUSG00000040591.19	ENSMUST00000102594.11	1977	9	22674	9	22654	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGGAGTCATGACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	91252313	91108183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91252210
ENSMUSG00000040591.19_8	chr2	-	1494	8	FSM	ENSMUSG00000040591.19	ENSMUST00000094835.9	1498	8	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGAGTCTAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	91275022	91108589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91109303_91109534_91109599_91112090_91112201_91112809_91113006_91114579_91114666_91135093_91135179_91214073_91214205_91274913
ENSMUSG00000040596.16_0	chr1	-	4821	6	FSM	ENSMUSG00000040596.16	ENSMUST00000128861.3	4848	6	27	0	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATACCTTTCCAATCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	166237405	166223737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_166227735_166229434_166229534_166231066_166231194_166235967_166236102_166236566_166236901_166237275
ENSMUSG00000040599.14_0	chr11	+	2985	3	FSM	ENSMUSG00000040599.14	ENSMUST00000048807.12	3003	3	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTATGTATTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70910450	70918193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70911016_70915375_70915538_70915935
ENSMUSG00000040605.8_0	chr16	+	3020	8	FSM	ENSMUSG00000040605.8	ENST00000347667.5	3030	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCTCGTGTGAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	97157998	97239717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97158302_97200833_97200923_97209476_97209694_97213257_97213387_97214548_97214684_97216278_97216381_97225689_97225859_97237841
ENSMUSG00000040606.15_0	chr4	-	2089	14	FSM	ENSMUSG00000040606.15	ENST00000376030.7	2105	14	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAAAGCCGCGTGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	141937507	141832103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141832266_141834122_141834238_141835856_141836024_141836587_141836690_141839418_141839651_141844395_141844515_141845385_141845592_141868983_141869108_141870604_141870656_141874328_141874460_141878156_141878347_141881740_141881912_141886354_141886492_141937325
ENSMUSG00000040612.14_0	chr1	+	8222	10	FSM	ENSMUSG00000040612.14	ENSMUST00000111416.7	8251	10	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTACTTTTGTTATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	166081731	166144387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_166082036_166096873_166097207_166098067_166098188_166118984_166119042_166122159_166122307_166123320_166123498_166131070_166131185_166135288_166135503_166136415_166137113_166138328
ENSMUSG00000040613.15_0	chr6	-	2259	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112586.8	2265	8	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGTTTGTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	122579400	122554753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568220_122573590_122573737_122577016_122577085_122579215
ENSMUSG00000040613.15_1	chr6	-	2104	8	FSM	ENSMUSG00000040613.15	ENSMUST00000112585.8	2127	8	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAACCATGTATCAATT	NA	NA	NA	NA	NA	NA	NA	NA	122579321	122554773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122555895_122557646_122557766_122558311_122558710_122565103_122565132_122568045_122568164_122573590_122573737_122577016_122577085_122579215
ENSMUSG00000040616.4_0	chr4	-	852	2	FSM	ENSMUSG00000040616.4	ENST00000434578.6	871	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGAGGGGTCAAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	141765089	141758923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141759402_141764715
ENSMUSG00000040618.8_0	chr14	+	4579	10	FSM	ENSMUSG00000040618.8	ENSMUST00000226519.2	4625	10	11	35	11	-35	multi-exon	FALSE	canonical	NA	NA	NA	NA	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTACATATAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	55777733	55788664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55777971_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_10	chr14	+	1916	9	FSM	ENSMUSG00000040618.8	ENST00000561286.5	1933	9	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAAATGTGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55777872	55786298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55778059_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040618.8_13	chr14	+	1638	9	FSM	ENSMUSG00000040618.8	ENST00000559250.5	1656	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAAAATGTGTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55779868	55786298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55786093
ENSMUSG00000040618.8_6	chr14	+	2409	10	FSM	ENSMUSG00000040618.8	ENST00000545054.6	2419	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGAACCCCCAGGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	55777872	55786259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55778345_55779862_55780109_55781045_55781231_55781316_55781521_55781851_55782040_55782341_55782505_55782663_55782883_55785153_55785292_55785496_55785593_55785761
ENSMUSG00000040620.16_0	chr11	-	5148	12	FSM	ENSMUSG00000040620.16	ENSMUST00000108527.8	5184	12	27	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCGATAAGTCTTGGTATC	NA	NA	NA	NA	NA	NA	NA	NA	70895236	70874925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70878254_70879892_70879980_70882933_70883138_70883484_70883613_70884435_70884525_70884682_70884843_70885964_70886077_70886713_70886900_70890195_70890367_70890546_70890775_70892344_70892506_70894942
ENSMUSG00000040621.15_0	chrX	+	1374	5	FSM	ENSMUSG00000040621.15	ENSMUST00000130880.9	1389	5	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTCATAAAAGCCTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	164953452	164972788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_164953547_164959840_164960076_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_1	chrX	+	1832	4	FSM	ENSMUSG00000040621.15	ENSMUST00000056410.11	1862	4	5	25	5	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	164953454	164973483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_164953547_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_2	chrX	+	1900	5	FSM	ENSMUSG00000040621.15	ENSMUST00000087169.11	1928	5	0	28	0	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	164953490	164973478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_164953547_164961529_164961639_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_3	chrX	+	1288	4	ISM	ENSMUSG00000040621.15	ENSMUST00000130880.9	1389	5	6389	6	6348	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAAGCCTTAAGCCACGT	NA	NA	NA	NA	NA	NA	NA	NA	164959838	164972794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_164960076_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040621.15_4	chrX	+	1837	4	ISM	ENSMUSG00000040621.15	ENSMUST00000087169.11	1928	5	8046	28	8046	-28	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	164961536	164973478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_164961639_164961787_164961827_164963348_164963806_164972239
ENSMUSG00000040627.15_0	chr6	+	496	3	FSM	ENSMUSG00000040627.15	ENST00000537228.5	509	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTGCCTGTCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	122536438	122538915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122536578_122537999_122538271_122538829
ENSMUSG00000040631.9_0	chr8	-	2618	7	FSM	ENSMUSG00000040631.9	ENST00000566936.5	2624	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGTGTGTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95597798	95590455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040631.9_1	chr8	-	2548	8	FSM	ENSMUSG00000040631.9	ENSMUST00000212810.2	2558	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGTGTGTGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	95597822	95590455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040631.9_6	chr8	-	2567	9	FSM	ENSMUSG00000040631.9	ENSMUST00000046461.9	2590	9	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAAGACAACTACTG	NA	NA	NA	NA	NA	NA	NA	NA	95602949	95590501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95591876_95591969_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487_95597697_95602758
ENSMUSG00000040631.9_9	chr8	-	1745	8	FSM	ENSMUSG00000040631.9	ENST00000569548.5	1765	8	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCCAGGACAGCAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	95597852	95591292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95591876_95591965_95592091_95592248_95592388_95593084_95593275_95593375_95593496_95593755_95593871_95594019_95594128_95597487
ENSMUSG00000040648.16_0	chr1	-	5854	28	FSM	ENSMUSG00000040648.16	ENSMUST00000042509.13	5882	28	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGCATACACATAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	97698115	97633779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97635556_97639447_97639574_97640728_97640870_97647558_97647632_97651394_97651560_97654913_97655031_97655119_97655228_97656642_97656758_97657635_97657764_97661610_97661835_97662691_97662834_97668186_97668370_97668548_97668671_97668794_97668921_97671781_97671868_97672887_97672998_97673119_97673196_97674142_97674230_97675271_97675374_97677266_97677389_97678291_97678454_97680428_97680531_97682779_97682935_97683610_97683697_97684568_97684660_97686893_97687090_97689149_97689547_97697579
ENSMUSG00000040649.16_0	chr6	-	1300	8	FSM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGTTCTGGATGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	122449731	122424395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122424419_122426786_122426952_122429512_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
ENSMUSG00000040649.16_2	chr6	-	1287	7	ISM	ENSMUSG00000040649.16	ENST00000619374.4	1321	8	5	2397	5	-2397	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGTATTTCCAACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	122449741	122426786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_122426952_122429512_122429723_122433476_122433623_122436050_122436255_122437919_122438007_122440936_122441168_122449497
ENSMUSG00000040651.10_1	chr14	+	5634	24	FSM	ENSMUSG00000040651.10	ENST00000683822.1	5648	24	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTCTTTGATAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	27150920	27203928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_27151342_27160555_27160702_27162107_27162201_27163386_27163460_27163843_27163936_27164415_27164578_27168341_27168467_27169447_27169480_27170111_27170218_27171713_27171818_27171902_27172007_27181735_27181809_27181897_27181970_27183040_27183743_27186002_27186403_27188123_27188269_27189462_27189523_27193574_27194504_27197651_27197775_27198494_27198655_27199068_27199178_27201585_27201765_27201880_27202049_27202872
ENSMUSG00000040652.17_0	chr9	+	1833	5	NIC	ENSMUSG00000040652.17	novel	1843	6	NA	NA	9	-2	intron_retention	FALSE	canonical	NA	NA	NA	NA	2955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGGTCTGTCTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65583838	65597580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_65584048_65593477_65593636_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040652.17_2	chr9	+	1679	4	FSM	ENSMUSG00000040652.17	ENST00000560258.6	1690	4	11	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	65583878	65597552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65584048_65593477_65593636_65595079_65595256_65596376
ENSMUSG00000040652.17_4	chr9	+	760	4	FSM	ENSMUSG00000040652.17	ENST00000559753.1	785	4	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTAAATGAAGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	65583888	65596715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65584048_65595079_65595256_65596102_65596189_65596376
ENSMUSG00000040653.7_0	chr10	+	2600	4	FSM	ENSMUSG00000040653.7	ENSMUST00000043374.7	2617	4	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTGTTTTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3316069	3414971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3316970_3373493_3373578_3375733_3375767_3413388
ENSMUSG00000040653.7_1	chr10	+	2005	2	FSM	ENSMUSG00000040653.7	ENSMUST00000217573.2	2013	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAGCTTGTTTTTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	3316547	3414971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3316970_3413388
ENSMUSG00000040658.8_0	chr17	+	1177	4	FSM	ENSMUSG00000040658.8	ENSMUST00000046497.8	1190	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGTTGCCTTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	46807643	46810544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46807899_46809350_46809420_46809568_46809680_46809802
ENSMUSG00000040659.4_0	chr4	-	2370	4	FSM	ENSMUSG00000040659.4	ENSMUST00000036854.4	2381	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGAGCTTGCCGAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	141602225	141585457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141587190_141587858_141587994_141589115_141589264_141601870
ENSMUSG00000040663.10_0	chr19	+	1836	3	FSM	ENSMUSG00000040663.10	ENSMUST00000046506.7	1847	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTTGGACTCTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	4264302	4273544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4264555_4270231_4270399_4272127
ENSMUSG00000040666.20_0	chr16	+	1324	8	FSM	ENSMUSG00000040666.20	ENSMUST00000048770.16	1341	8	7	10	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAAGAATCTACCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	96001656	96030123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_96001949_96007681_96007868_96015212_96015294_96020688_96020761_96021698_96021792_96025000_96025082_96025673_96025792_96029722
ENSMUSG00000040667.12_0	chr11	-	2436	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108531.8	2453	17	7	10	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTGACTTTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	70860792	70833907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040667.12_17	chr11	-	2364	17	FSM	ENSMUSG00000040667.12	ENSMUST00000108530.2	2389	17	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAAATAAAGTTTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	70860766	70833938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835389_70835498_70835565_70835670_70835797_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040667.12_8	chr11	-	2442	17	FSM	ENSMUSG00000040667.12	ENSMUST00000035283.11	2450	17	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAAAATTTGACTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	70860784	70833911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70834149_70834704_70834824_70834937_70835065_70835307_70835407_70835498_70835565_70835670_70835812_70836028_70836188_70838527_70838630_70840971_70841063_70842085_70842185_70845326_70845475_70846961_70847149_70849091_70849266_70852407_70852495_70856532_70856659_70858673_70858844_70860474
ENSMUSG00000040669.15_0	chr6	-	3680	13	FSM	ENSMUSG00000040669.15	ENSMUST00000081849.10	3683	13	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTACTGCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	122313972	122294690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUSG00000040669.15_1	chr6	-	3838	14	FSM	ENSMUSG00000040669.15	ENSMUST00000079560.10	3839	14	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTACTGCATTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	122313974	122294690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816
ENSMUSG00000040669.15_3	chr6	-	4173	15	FSM	ENSMUSG00000040669.15	ENSMUST00000160696.8	4213	15	33	7	33	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAAGGATGAAAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	122315790	122294715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122309480_122309637_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122315430
ENSMUSG00000040669.15_4	chr6	-	3601	14	FSM	ENSMUSG00000040669.15	ENSMUST00000161054.8	3612	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTTCACAAAACAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	122316593	122294808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_122295607_122296275_122296508_122296859_122297011_122297173_122297283_122297896_122298012_122298830_122299043_122299283_122299432_122299966_122300773_122302416_122302910_122310249_122310400_122311028_122311110_122311931_122312043_122313816_122313975_122316556
ENSMUSG00000040675.18_0	chr10	+	3648	28	FSM	ENSMUSG00000040675.18	ENSMUST00000117291.8	3669	28	13	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGTGTTCAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	3923130	4106103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105541
ENSMUSG00000040675.18_5	chr10	+	3677	28	FSM	ENSMUSG00000040675.18	ENSMUST00000120585.8	3687	28	7	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAGAAAAAAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	3923137	4117078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4116480
ENSMUSG00000040675.18_6	chr10	+	3525	28	FSM	ENSMUSG00000040675.18	ENSMUST00000043735.8	3535	28	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACCGTGTTCAGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	3923145	4106103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_3923479_3928633_3928719_3930215_3930267_3930350_3930405_3934083_3934209_3935565_3935667_3939860_3939998_3957741_3957854_3965513_3965606_3966723_3966822_3968425_3968600_3978394_3978532_3980689_3980737_3982231_3982340_3983288_3983364_3985215_3985319_3991772_3991850_3997830_3997972_3998199_3998269_4006749_4006862_4033736_4033877_4038233_4038276_4039294_4039396_4039995_4040174_4053235_4053344_4056376_4056530_4098008_4098127_4105649
ENSMUSG00000040680.10_0	chr17	-	2103	7	FSM	ENSMUSG00000040680.10	ENST00000572045.5	2122	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGGTTAGGGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	23964095	23960419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
ENSMUSG00000040680.10_1	chr17	-	1920	8	FSM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGGTTAGGGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	23963993	23960419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516_23963692_23963908
ENSMUSG00000040680.10_2	chr17	-	1838	7	ISM	ENSMUSG00000040680.10	ENST00000575769.1	1935	8	305	9	305	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGGTTAGGGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	23963694	23960419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_23961250_23961330_23961457_23961535_23961869_23962193_23962348_23962528_23962654_23962726_23962819_23963516
ENSMUSG00000040681.17_0	chr16	-	2157	6	FSM	ENSMUSG00000040681.17	ENSMUST00000050884.16	2174	6	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	8548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGCCCTTGAAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	95928917	95921822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95923618_95925922_95926046_95928352_95928404_95928510_95928541_95928631_95928662_95928789
ENSMUSG00000040688.17_0	chr17	-	5213	22	FSM	ENSMUSG00000040688.17	ENSMUST00000126319.8	5226	22	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCACCCTGGGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	24926625	24916926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24919760_24919849_24920009_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088_24925141_24926497
ENSMUSG00000040688.17_14	chr17	-	2322	21	FSM	ENSMUSG00000040688.17	ENST00000615855.4	2330	21	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGCTGTCCCCATGCCC	NA	NA	NA	NA	NA	NA	NA	NA	24925144	24919691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24919760_24919849_24920007_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908_24925005_24925088
ENSMUSG00000040688.17_15	chr17	-	2254	20	ISM	ENSMUSG00000040688.17	ENST00000615855.4	2330	21	150	10	150	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGAAGCTGTCCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	24924994	24919693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24919760_24919849_24920007_24920093_24920166_24920253_24920358_24920576_24920636_24920715_24920873_24920950_24921022_24921118_24921350_24921449_24921598_24922211_24922316_24922965_24923025_24923109_24923252_24923340_24923523_24923605_24923700_24923784_24923861_24924120_24924292_24924370_24924456_24924538_24924681_24924774_24924823_24924908
ENSMUSG00000040690.16_0	chr4	+	5197	70	FSM	ENSMUSG00000040690.16	ENSMUST00000044565.15	5206	70	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTATCTTCTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	129941640	129993069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129941877_129943425_129943533_129945447_129945523_129945609_129945728_129946644_129946769_129947046_129947314_129947938_129948020_129948141_129948268_129948929_129948984_129949259_129949287_129949782_129949819_129950735_129950763_129951785_129951849_129952089_129952132_129952218_129952264_129952343_129952380_129952749_129952813_129953102_129953148_129953234_129953331_129953524_129953564_129954016_129954062_129954240_129954277_129954666_129954778_129955137_129955174_129955394_129955431_129955504_129955589_129955849_129955895_129958656_129958693_129958832_129958878_129959166_129959299_129959973_129960010_129960398_129960507_129960785_129960909_129961011_129961066_129961278_129961321_129962154_129962191_129962275_129962330_129962477_129962547_129966047_129966075_129966618_129966679_129966861_129966910_129967032_129967087_129970791_129970846_129971012_129971046_129972956_129973074_129973284_129973327_129973423_129973511_129974368_129974414_129976914_129976969_129977464_129977519_129978060_129978115_129979611_129979657_129979796_129979851_129980011_129980048_129980282_129980346_129982414_129982487_129982664_129982719_129983304_129983350_129983529_129983575_129983876_129983931_129984299_129984354_129986532_129986575_129986866_129986957_129988306_129988343_129989335_129989381_129990138_129990328_129990665_129990733_129991587_129991765_129991958_129992037_129992682
ENSMUSG00000040694.5_0	chr17	-	1406	3	FSM	ENSMUSG00000040694.5	ENSMUST00000046549.5	1420	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTTTGTGGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	48739950	48726264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_48726662_48729968_48730534_48739506
ENSMUSG00000040697.11_0	chr4	-	2041	14	FSM	ENSMUSG00000040697.11	ENST00000375849.5	2053	14	9	3	9	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGTAAATGTGACAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	141516376	141485643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141485732_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199
ENSMUSG00000040697.11_5	chr4	-	5950	15	FSM	ENSMUSG00000040697.11	ENSMUST00000038014.11	5969	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGATGGCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	141518190	141487506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141491206_141491878_141492050_141493794_141493894_141493972_141494054_141495018_141495096_141495201_141495385_141497163_141497348_141498217_141498349_141501811_141501971_141502676_141502782_141504205_141504391_141510083_141510418_141511998_141512066_141516199_141516385_141517900
ENSMUSG00000040699.14_0	chr11	-	2945	5	FSM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCATGTCCACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106050963	106047081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173_106050269_106050876
ENSMUSG00000040699.14_1	chr11	-	2859	4	ISM	ENSMUSG00000040699.14	ENSMUST00000045923.10	2950	5	699	0	484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGCATGTCCACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106050269	106047081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_106049660_106049760_106049901_106049987_106050033_106050173
ENSMUSG00000040701.17_0	chr14	-	2661	22	FSM	ENSMUSG00000040701.17	ENSMUST00000036041.15	2673	22	2	10	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAACGAAGGTGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55344048	55336316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381_55343587_55343964
ENSMUSG00000040701.17_3	chr14	-	2573	21	ISM	ENSMUSG00000040701.17	ENSMUST00000170285.2	2596	22	22	5	22	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAACGAAGGTGTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55343582	55336316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_55336619_55336696_55336796_55337158_55337323_55337875_55338027_55338107_55338235_55338527_55338633_55338851_55338980_55339054_55339145_55339767_55339891_55339964_55340020_55340098_55340240_55340393_55340508_55340659_55340716_55340865_55340965_55341268_55341350_55341819_55341916_55342038_55342116_55342287_55342385_55342484_55342627_55342762_55342888_55343381
ENSMUSG00000040711.9_0	chr11	+	7401	13	FSM	ENSMUSG00000040711.9	ENSMUST00000038753.6	7413	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTGCCTAGAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	32297831	32378173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ENSMUSG00000040711.9_1	chr11	+	7486	14	FSM	ENSMUSG00000040711.9	ENSMUST00000239041.2	7497	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTGCCTAGAAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	32297830	32378173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32297969_32321517_32321599_32331433_32331510_32337927_32338005_32346441_32346534_32347065_32347092_32353860_32353996_32357561_32357667_32358967_32359052_32361456_32361575_32364200_32364428_32365922_32365973_32367079_32367206_32372022
ENSMUSG00000040712.17_4	chr11	-	4465	22	FSM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTAGCCTCCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70578757	70560295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561813_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574192_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ENSMUSG00000040712.17_5	chr11	-	4409	21	ISM	ENSMUSG00000040712.17	ENST00000572543.5	4469	22	1500	4	1500	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTAGCCTCCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70577257	70560295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561813_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574192_70574715_70574852_70574930_70574999_70576888_70576993_70577172
ENSMUSG00000040712.17_7	chr11	-	4478	22	FSM	ENSMUSG00000040712.17	ENST00000348066.8	4489	22	7	4	-4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCTAGCCTCCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	70578785	70560295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70561089_70561171_70561247_70561374_70561563_70561813_70561906_70562275_70562460_70562709_70562907_70564779_70565082_70565437_70565661_70565981_70566061_70566378_70566564_70567225_70567342_70569109_70569245_70570352_70570480_70571650_70572595_70573286_70573422_70573719_70573874_70574104_70574177_70574715_70574852_70574930_70574999_70576888_70576993_70577172_70577268_70578711
ENSMUSG00000040713.13_0	chr1	+	2140	4	FSM	ENSMUSG00000040713.13	ENSMUST00000111432.10	2163	4	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAACAAAGTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	165591325	165602865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_165591708_165597381_165597502_165598200_165598386_165601412
ENSMUSG00000040714.15_0	chr7	-	1817	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108458.10	1823	13	0	6	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTGTGCGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	19138029	19128367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19137945
ENSMUSG00000040714.15_1	chr7	-	1829	13	FSM	ENSMUSG00000040714.15	ENSMUST00000108459.9	1849	13	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTGTGCGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	19133829	19128367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208_19133475_19133733
ENSMUSG00000040714.15_2	chr7	-	1736	12	ISM	ENSMUSG00000040714.15	ENSMUST00000047170.10	1901	13	326	3	326	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTGCTGTGCGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	19133477	19128367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_19128647_19128809_19128874_19128985_19129093_19129163_19129205_19129289_19129381_19129724_19129899_19130206_19130309_19130431_19130520_19130796_19131017_19131325_19131396_19131886_19132118_19133208
ENSMUSG00000040717.7_0	chr14	+	8272	13	FSM	ENSMUSG00000040717.7	ENSMUST00000035336.5	8280	13	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGCAGTGGCTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	26760903	26829241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_26761187_26798307_26798366_26804611_26804738_26809355_26809475_26809962_26810084_26813745_26813791_26813885_26814038_26815353_26815420_26816134_26816190_26816732_26816844_26817859_26818045_26821439_26822383_26823233
ENSMUSG00000040720.16_0	chr4	+	3926	13	FSM	ENSMUSG00000040720.16	ENSMUST00000055372.14	3954	13	14	14	14	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCTATGTACACAC	NA	NA	NA	NA	NA	NA	NA	NA	11485971	11527607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594
ENSMUSG00000040720.16_1	chr4	+	6474	24	FSM	ENSMUSG00000040720.16	ENSMUST00000059914.13	6506	24	28	4	28	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATAAGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	11485985	11550680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ENSMUSG00000040720.16_10	chr4	+	6501	24	ISM	ENSMUSG00000040720.16	ENSMUST00000108307.3	6571	25	8724	4	8724	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATAAGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	11494766	11550680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11516828_11516979_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ENSMUSG00000040720.16_8	chr4	+	6567	25	FSM	ENSMUSG00000040720.16	ENSMUST00000108307.3	6571	25	0	4	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAATAAGTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	11486042	11550680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11486106_11494763_11494880_11498739_11498827_11501308_11501358_11505441_11505611_11506953_11507077_11507906_11508180_11513027_11514169_11516828_11516979_11518925_11519415_11521104_11521260_11522852_11522936_11526346_11526441_11526594_11527140_11527647_11527884_11528537_11528791_11530827_11531046_11534188_11534322_11539909_11540063_11540480_11540642_11542106_11542204_11544830_11544998_11545968_11546301_11548730_11548875_11549544
ENSMUSG00000040722.8_0	chr9	-	3215	7	FSM	ENSMUSG00000040722.8	ENSMUST00000046587.8	3225	7	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCCTCTGTGTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	57375332	57348610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57351148_57352654_57352773_57353354_57353457_57354359_57354517_57358638_57358768_57359262_57359318_57375215
ENSMUSG00000040725.14_10	chr7	-	2746	15	FSM	ENSMUSG00000040725.14	ENST00000595018.5	2752	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATTTAAAAAAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25455646	25421270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ENSMUSG00000040725.14_11	chr7	-	2681	14	ISM	ENSMUSG00000040725.14	ENSMUST00000043765.14	3354	15	3765	364	3703	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATTTAAAAAAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25450410	25421270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_25421789_25422230_25422423_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289
ENSMUSG00000040725.14_2	chr7	-	3244	15	FSM	ENSMUSG00000040725.14	ENST00000352456.7	3249	15	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	25455659	25420806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25421789_25422230_25422444_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25455586
ENSMUSG00000040725.14_3	chr7	-	3171	14	ISM	ENSMUSG00000040725.14	ENST00000352456.7	3249	15	5249	0	3698	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACCACCAC	NA	NA	NA	NA	NA	NA	NA	NA	25450415	25420806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_25421789_25422230_25422444_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289
ENSMUSG00000040725.14_7	chr7	-	2868	15	FSM	ENSMUSG00000040725.14	ENST00000602130.5	2893	15	10	15	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATTTAAAAAAAATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25454103	25421270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25421789_25422230_25422267_25423979_25424270_25425348_25425640_25426159_25426329_25432440_25432570_25432668_25432792_25433983_25434251_25440252_25440366_25442351_25442452_25444517_25444658_25445772_25445847_25447747_25447902_25450289_25450416_25453765
ENSMUSG00000040728.16_0	chr4	-	3356	15	FSM	ENSMUSG00000040728.16	ENST00000454170.7	3372	15	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCAATGTTCGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	11386543	11331940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11332811_11332902_11333474_11353294_11353464_11357471_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ENSMUSG00000040728.16_2	chr4	-	3633	16	FSM	ENSMUSG00000040728.16	ENST00000423620.6	3651	16	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCAATGTTCGCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	11386669	11331940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11332811_11332902_11333474_11344111_11344263_11353294_11353464_11357471_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ENSMUSG00000040728.16_30	chr4	-	3003	15	FSM	ENSMUSG00000040728.16	ENST00000646773.1	3020	15	12	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGGCGGGAAAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	11386544	11332306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11332811_11332902_11333474_11353294_11353464_11357459_11357659_11359737_11359957_11360953_11361256_11365003_11365047_11365143_11365277_11365373_11365485_11366907_11366963_11367084_11367184_11379290_11379406_11384348_11384463_11385646_11385776_11386304
ENSMUSG00000040731.14_0	chr5	-	2713	7	FSM	ENSMUSG00000040731.14	ENSMUST00000202622.4	2726	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTGGAACCTCTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	134668336	134648579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134650503_134650802_134650941_134653294_134653355_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040731.14_4	chr5	-	2351	6	FSM	ENSMUSG00000040731.14	ENSMUST00000036125.10	2367	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAACACTTATGCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	134668192	134648737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134650503_134650802_134650941_134654219_134654317_134654394_134654460_134656441_134656630_134668094
ENSMUSG00000040732.21_0	chr16	-	2813	10	FSM	ENSMUSG00000040732.21	ENST00000398907.5	2824	10	4	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAACGGTGGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95260162	95160035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95260086
ENSMUSG00000040732.21_1	chr16	-	2725	9	FSM	ENSMUSG00000040732.21	ENST00000398911.5	2743	9	11	7	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAACGGTGGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95210802	95160035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593
ENSMUSG00000040732.21_2	chr16	-	2509	8	FSM	ENSMUSG00000040732.21	ENST00000398897.5	2525	8	9	7	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAACGGTGGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95190897	95160035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752
ENSMUSG00000040732.21_3	chr16	-	2808	10	FSM	ENSMUSG00000040732.21	ENST00000398905.5	2821	10	6	7	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAGAACGGTGGTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95260160	95160035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95160717_95160961_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95260086
ENSMUSG00000040732.21_41	chr16	-	1775	12	FSM	ENSMUSG00000040732.21	ENST00000398919.6	1785	12	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGAAACGGTTGGCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	95386380	95161575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95162186_95169510_95169559_95170180_95170238_95170853_95170923_95178159_95178232_95179970_95180052_95180926_95181131_95190752_95190905_95210593_95210812_95325385_95325474_95331122_95331225_95386306
ENSMUSG00000040734.15_2	chr7	+	2333	11	FSM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCGAGGCTGAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	19095164	19109814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19095242_19102470_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649
ENSMUSG00000040734.15_4	chr7	+	2256	10	ISM	ENSMUSG00000040734.15	ENST00000360957.10	2338	11	7309	2	7309	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCGAGGCTGAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	19102470	19109814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_19102548_19102641_19102785_19103718_19104230_19104313_19104413_19104490_19104583_19105129_19105572_19106848_19107310_19109174_19109307_19109409_19109544_19109649
ENSMUSG00000040738.11_0	chr4	-	4424	28	FSM	ENSMUSG00000040738.11	ENST00000523731.6	4438	28	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATTCTGTACATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	11254149	11202992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11203242_11203318_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ENSMUSG00000040738.11_17	chr4	-	3194	27	FSM	ENSMUSG00000040738.11	ENSMUST00000108319.9	3220	27	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATACATATGTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	11254240	11204390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11211881_11211933_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ENSMUSG00000040738.11_18	chr4	-	3155	26	FSM	ENSMUSG00000040738.11	ENSMUST00000108318.3	3169	26	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAATACATATGTACAAT	NA	NA	NA	NA	NA	NA	NA	NA	11254252	11204390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11204584_11208825_11208870_11209211_11209277_11209391_11209466_11213705_11213810_11216456_11216576_11218611_11218674_11218768_11218826_11219892_11219927_11221112_11221298_11223765_11223888_11225601_11225804_11227119_11227231_11228850_11228985_11230332_11230509_11231652_11231724_11234570_11234713_11235509_11235611_11239306_11239463_11241580_11241689_11245723_11245907_11246094_11246147_11247831_11247904_11248170_11248312_11252775_11252951_11253980
ENSMUSG00000040746.16_0	chr11	+	1812	9	FSM	ENSMUSG00000040746.16	ENSMUST00000037534.8	1833	9	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAAAAAAGGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	70538121	70542235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040746.16_4	chr11	+	1351	10	FSM	ENSMUSG00000040746.16	ENST00000572430.5	1366	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGGCTAGAAGCCATAGG	NA	NA	NA	NA	NA	NA	NA	NA	70538279	70542167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70538425_70538659_70538779_70538854_70538936_70540046_70540173_70540270_70540359_70540500_70540592_70540737_70540844_70540951_70541046_70541589_70541671_70541747
ENSMUSG00000040747.10_0	chr3	-	1715	8	FSM	ENSMUSG00000040747.10	ENSMUST00000038845.10	1742	8	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATCAAACATTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	106697448	106667246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_106668192_106669408_106669493_106670527_106670609_106674642_106674739_106675241_106675317_106676113_106676303_106677997_106678077_106697282
ENSMUSG00000040749.12_0	chrX	-	1712	4	FSM	ENSMUSG00000040749.12	ENSMUST00000071667.9	1712	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	162859146	162853700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859110
ENSMUSG00000040749.12_1	chrX	-	1777	4	FSM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	162859111	162853700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_162855224_162856285_162856347_162858573_162858666_162859010
ENSMUSG00000040749.12_2	chrX	-	1677	3	ISM	ENSMUSG00000040749.12	ENSMUST00000037928.9	1783	4	451	0	451	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCAGGTTTTTCTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	162858666	162853700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_162855224_162856285_162856347_162858573
ENSMUSG00000040759.10_0	chr14	+	772	5	FSM	ENSMUSG00000040759.10	ENST00000339180.9	789	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGCTGATGCCCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	55173930	55176364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55174241_55175351_55175514_55175680_55175832_55176038_55176132_55176308
ENSMUSG00000040760.12_0	chr14	-	7626	22	FSM	ENSMUSG00000040760.12	ENSMUST00000036570.5	7642	22	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTATTTTTGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	26693179	26640950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26645829_26647373_26647464_26647915_26647967_26649685_26649833_26650396_26650434_26650515_26650691_26662200_26662254_26664604_26664788_26665868_26665961_26667501_26667559_26669077_26669121_26671398_26671588_26672508_26672668_26673391_26673475_26674934_26675082_26680409_26680469_26681381_26681424_26682907_26682996_26684762_26684835_26685603_26685664_26686815_26686915_26692357
ENSMUSG00000040761.17_0	chr4	-	12057	15	FSM	ENSMUSG00000040761.17	ENSMUST00000078886.10	12082	15	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAATACAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	141265753	141195218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ENSMUSG00000040761.17_1	chr4	-	12273	16	FSM	ENSMUSG00000040761.17	ENSMUST00000105786.3	12299	16	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAAAAATACAAAACACC	NA	NA	NA	NA	NA	NA	NA	NA	141265900	141195218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141196349_141196693_141196853_141197126_141197322_141197420_141197922_141198680_141206701_141208056_141208126_141211035_141211137_141212869_141212984_141214876_141214991_141215303_141215430_141217156_141217309_141220706_141220908_141221548_141221710_141244146_141244630_141249382_141249704_141265474
ENSMUSG00000040767.11_0	chr11	+	814	5	FSM	ENSMUSG00000040767.11	ENSMUST00000039601.10	821	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATCAGAAAGCCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	32155421	32158984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32155664_32156959_32157051_32157556_32157663_32158333_32158409_32158684
ENSMUSG00000040770.6_0	chr14	+	1278	2	FSM	ENSMUSG00000040770.6	ENST00000329715.2	1291	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGGTCTTATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	55170135	55173291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55170683_55172560
ENSMUSG00000040771.15_0	chr17	+	1316	6	FSM	ENSMUSG00000040771.15	ENSMUST00000167180.8	1324	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGTTTGCACACATGA	NA	NA	NA	NA	NA	NA	NA	NA	48717049	48724282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48717401_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUSG00000040771.15_3	chr17	+	1124	6	FSM	ENSMUSG00000040771.15	ENSMUST00000046651.7	1135	6	11	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATGAACGTCTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	48717118	48724294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48717266_48717855_48717933_48718291_48718437_48721253_48721313_48722248_48722362_48723711
ENSMUSG00000040771.15_7	chr17	+	364	3	FSM	ENSMUSG00000040771.15	ENST00000482515.5	370	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACGAAGCTGTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	48717856	48723854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_48717933_48718291_48718437_48723711
ENSMUSG00000040771.15_9	chr17	+	288	2	ISM	ENSMUSG00000040771.15	ENST00000482515.5	370	3	437	4	437	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACGAAGCTGTGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	48718291	48723854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_48718437_48723711
ENSMUSG00000040774.16_0	chr3	-	2801	9	FSM	ENSMUSG00000040774.16	ENSMUST00000068301.11	2814	9	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGTTTTCATCACAGA	NA	NA	NA	NA	NA	NA	NA	NA	106455107	106409577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446920_106454995
ENSMUSG00000040774.16_11	chr3	-	2108	9	FSM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAGAACCAGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106454894	106410307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446913_106454738
ENSMUSG00000040774.16_5	chr3	-	2064	8	ISM	ENSMUSG00000040774.16	ENSMUST00000121231.8	2121	9	7986	-103	7986	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCAGCCGTGTCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	106446912	106410195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505
ENSMUSG00000040774.16_6	chr3	-	2145	9	FSM	ENSMUSG00000040774.16	ENST00000357172.9	2155	9	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCAGCCGTGTCATCAT	NA	NA	NA	NA	NA	NA	NA	NA	106455076	106410195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_106411061_106411841_106411968_106412465_106412625_106413036_106413169_106420118_106420204_106438452_106438595_106440670_106440819_106446505_106446913_106454995
ENSMUSG00000040782.13_0	chr1	+	5096	20	FSM	ENSMUSG00000040782.13	ENSMUST00000076894.11	5116	20	7	13	7	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGCAAAGCTAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	159059902	159175197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_159060421_159067131_159067192_159072158_159072257_159076771_159076849_159077592_159077713_159080117_159080187_159094326_159094387_159095678_159095756_159105658_159105717_159112117_159112233_159116474_159116611_159134142_159134287_159135979_159136089_159136452_159136535_159147293_159147411_159152486_159152605_159154646_159154772_159156171_159156333_159170376_159170422_159172390
ENSMUSG00000040785.20_0	chr16	+	7391	46	FSM	ENSMUSG00000040785.20	ENSMUST00000117648.9	7415	46	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAGGTCAGCCGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	94171491	94270070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94171721_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ENSMUSG00000040785.20_104	chr16	+	431	5	FSM	ENSMUSG00000040785.20	ENST00000621658.1	452	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAATATAGGTAAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	94186210	94192957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94186297_94188195_94188250_94189123_94189245_94191060_94191147_94192873
ENSMUSG00000040785.20_55	chr16	+	7993	46	FSM	ENSMUSG00000040785.20	ENSMUST00000232395.2	8007	46	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGATGATCTTAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	94181610	94270199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94182313_94184770_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ENSMUSG00000040785.20_76	chr16	+	8286	45	FSM	ENSMUSG00000040785.20	ENSMUST00000232660.2	8298	45	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGATGATCTTAACCAAG	NA	NA	NA	NA	NA	NA	NA	NA	94183775	94270199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_94184926_94185204_94185248_94185642_94185794_94186194_94186283_94188195_94188250_94189123_94189245_94191060_94191147_94192873_94192969_94193970_94194034_94204172_94204228_94209412_94209576_94210542_94210589_94211691_94211816_94212918_94212983_94216807_94216869_94217140_94217226_94219465_94219601_94220256_94220338_94221106_94221220_94223085_94223207_94224923_94225047_94225945_94226048_94227009_94227103_94227624_94227690_94228649_94228787_94230217_94230545_94232646_94232899_94233974_94234022_94235174_94235232_94236334_94236406_94240043_94240209_94243329_94244351_94245343_94245410_94248857_94249008_94251878_94252019_94253822_94253892_94255285_94255383_94257569_94257671_94258179_94258271_94258789_94258892_94260620_94260962_94263080_94263208_94263354_94263490_94267761_94267855_94268784
ENSMUSG00000040795.13_0	chr4	-	2624	5	FSM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	4	11	1	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATAAACATATATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	129512888	129508929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284_129512429_129512806
ENSMUSG00000040795.13_1	chr4	-	2541	4	ISM	ENSMUSG00000040795.13	ENSMUST00000046675.12	2639	5	465	11	462	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATAAACATATATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	129512427	129508929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_129510974_129511150_129511252_129511456_129511710_129512284
ENSMUSG00000040795.13_7	chr4	-	486	3	FSM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGACTTGTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129512885	129511892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129512156_129512284_129512429_129512806
ENSMUSG00000040795.13_8	chr4	-	408	2	ISM	ENSMUSG00000040795.13	ENSMUST00000121442.2	491	3	460	1	460	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTGGACTTGTTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	129512429	129511892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_129512156_129512284
ENSMUSG00000040797.17_0	chr6	-	2388	12	FSM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTAACGCCACCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	121421195	121356792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_121356869_121356953_121357004_121358607_121358701_121360873_121361036_121361160_121361261_121363531_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466_121390576_121421115
ENSMUSG00000040797.17_1	chr6	-	2310	11	ISM	ENSMUSG00000040797.17	ENST00000382841.2	2400	12	30622	8	30622	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTAACGCCACCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	121390577	121356792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_121356869_121356953_121357004_121358607_121358701_121360873_121361036_121361160_121361261_121363531_121363658_121364692_121364833_121366425_121366593_121366958_121367082_121387572_121387735_121389466
ENSMUSG00000040811.16_0	chr7	+	2245	19	FSM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	3	7	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGATGTCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	18915097	18940400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18915149_18915633_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_2	chr7	+	2267	19	FSM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACTGAGATGTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	18915128	18940396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18915149_18915633_18915663_18916194_18916366_18918714_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_4	chr7	+	2191	18	ISM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	538	11	504	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACTGAGATGTCTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	18915632	18940396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18915663_18916194_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_5	chr7	+	2247	18	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	509	4	509	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGATGTCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	18915637	18940400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18915663_18916194_18916366_18918714_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_8	chr7	+	2165	17	ISM	ENSMUSG00000040811.16	ENSMUST00000120595.8	2255	19	1100	7	1066	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGATGTCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	18916194	18940400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18916325_18918730_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040811.16_9	chr7	+	2217	17	ISM	ENSMUSG00000040811.16	ENSMUST00000048502.10	2275	19	1071	4	1071	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGATGTCTGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	18916199	18940400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18916366_18918714_18918881_18920026_18920097_18920185_18920297_18924642_18924739_18925508_18925644_18927933_18928034_18930121_18930277_18930417_18930544_18934424_18934557_18935048_18935117_18935489_18935579_18935754_18935853_18936433_18936522_18936901_18936998_18937826_18937958_18940010
ENSMUSG00000040813.17_0	chr9	-	1357	6	FSM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	0	7	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106562881	106535951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562833
ENSMUSG00000040813.17_1	chr9	-	1305	5	ISM	ENSMUSG00000040813.17	ENSMUST00000169068.8	1364	6	691	7	691	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106562190	106535951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127
ENSMUSG00000040813.17_2	chr9	-	1878	6	FSM	ENSMUSG00000040813.17	ENSMUST00000163441.8	1896	6	11	7	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106563011	106535951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106562442
ENSMUSG00000040813.17_3	chr9	-	1018	3	FSM	ENSMUSG00000040813.17	ENST00000614067.4	1028	3	4	6	4	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106559360	106535951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106536507_106539558_106539728_106559066
ENSMUSG00000040813.17_9	chr9	-	1386	6	FSM	ENSMUSG00000040813.17	ENSMUST00000046735.11	1391	6	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGATTTGAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106563110	106535951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106536507_106539558_106539728_106550715_106550938_106559066_106559363_106562127_106562195_106563033
ENSMUSG00000040818.11_0	chr14	+	2686	20	FSM	ENSMUSG00000040818.11	ENSMUST00000224111.2	2692	20	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACACTAGGTAGCTTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	26295019	26351443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_26295387_26313387_26313427_26313549_26313593_26320770_26320884_26321598_26321680_26324202_26324309_26325828_26325909_26327030_26327094_26328059_26328116_26329244_26329368_26329690_26329787_26333121_26333217_26337745_26337812_26338048_26338114_26340469_26340560_26347860_26347915_26348019_26348130_26348473_26348577_26349826_26349902_26350582
ENSMUSG00000040822.8_0	chr14	+	1819	2	FSM	ENSMUSG00000040822.8	ENSMUST00000038539.8	1843	2	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	966	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAGAAAGAAATAATTAC	NA	NA	NA	NA	NA	NA	NA	NA	54923683	54928185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54924578_54927260
ENSMUSG00000040824.4_0	chr7	+	1406	3	FSM	ENSMUSG00000040824.4	ENSMUST00000049294.4	1420	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTAGAGCTCTCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	18883655	18887462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18883820_18885142_18885323_18886400
ENSMUSG00000040824.4_2	chr7	+	366	2	FSM	ENSMUSG00000040824.4	ENST00000590212.1	382	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGAGCCTGCTCCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	18885152	18886569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18885323_18886373
ENSMUSG00000040836.16_0	chr1	+	1910	6	FSM	ENSMUSG00000040836.16	ENST00000682931.1	1922	6	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTGACTTCAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	165109509	165149417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_165109642_165133746_165134162_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUSG00000040836.16_1	chr1	+	1605	5	FSM	ENSMUSG00000040836.16	ENST00000539777.5	1621	5	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTGACTTCAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	165109904	165149417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_165110147_165137837_165138563_165144808_165144914_165146317_165146438_165149004
ENSMUSG00000040841.6_0	chr7	+	2994	3	FSM	ENSMUSG00000040841.6	ENSMUST00000049454.6	3007	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACATCCTAAGACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	18828524	18832467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18829344_18830156_18830945_18831080
ENSMUSG00000040842.18_0	chr4	-	3240	4	FSM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCTTCCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	140867074	140840312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140843176_140845837_140846093_140847634_140847685_140867002
ENSMUSG00000040842.18_1	chr4	-	3167	3	ISM	ENSMUSG00000040842.18	ENSMUST00000102487.4	3244	4	19394	1	19394	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCTTCCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	140847683	140840312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_140843176_140845837_140846093_140847634
ENSMUSG00000040842.18_3	chr4	-	848	4	FSM	ENSMUSG00000040842.18	ENST00000471507.5	861	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGGAGGATTAGGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	140867191	140842818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140843176_140845837_140846090_140847634_140847685_140867002
ENSMUSG00000040843.11_0	chr1	-	4359	7	FSM	ENSMUSG00000040843.11	ENSMUST00000043235.8	4380	7	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGGTGTTTTCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	165064499	165039862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165043450_165045351_165045415_165047667_165047764_165050097_165050230_165055073_165055174_165055836_165056017_165064298
ENSMUSG00000040848.12_0	chr1	-	5519	8	FSM	ENSMUSG00000040848.12	ENSMUST00000043338.10	5535	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAATGTAGTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	165021998	165001912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165006865_165009620_165009651_165011395_165011452_165011538_165011575_165012576_165012659_165015537_165015624_165015816_165015904_165021808
ENSMUSG00000040848.12_1	chr1	-	428	5	FSM	ENSMUSG00000040848.12	ENST00000367829.5	439	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGACATCAGTGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	165021969	165011393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_165011452_165011538_165011575_165015537_165015624_165015816_165015904_165021808
ENSMUSG00000040850.18_0	chr11	+	6457	47	FSM	ENSMUSG00000040850.18	ENSMUST00000041231.14	6491	47	20	14	20	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATCAATAAACACCATGG	NA	NA	NA	NA	NA	NA	NA	NA	30721745	30830347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_30722225_30741091_30741233_30741921_30742039_30752813_30752859_30754289_30754440_30754962_30755027_30756254_30756330_30757702_30757826_30759835_30759929_30760782_30761049_30761977_30762165_30763662_30763753_30765227_30765293_30765557_30765709_30767730_30767830_30768088_30768159_30769003_30769072_30769927_30770144_30770915_30771074_30773058_30773155_30780349_30780406_30782133_30782191_30782388_30782445_30782531_30782631_30784085_30784149_30784273_30784370_30785335_30785468_30787281_30787492_30788884_30789022_30791568_30791623_30791990_30792121_30793506_30793589_30795179_30795334_30795827_30795898_30797397_30797524_30798046_30798200_30800602_30800708_30801142_30801235_30802672_30802805_30803176_30803386_30806029_30806116_30811347_30811477_30815433_30815590_30824117_30824281_30826745_30826880_30828378_30828518_30829663
ENSMUSG00000040852.7_0	chr17	+	6880	30	FSM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATCTTTTGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	84819322	84929564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84819393_84829123_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ENSMUSG00000040852.7_5	chr17	+	6807	29	ISM	ENSMUSG00000040852.7	ENSMUST00000047206.7	6882	30	9804	2	9804	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTATCTTTTGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	84829126	84929564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_84829254_84854890_84854954_84864799_84864950_84866917_84867002_84867515_84867598_84871245_84871426_84873398_84874364_84877303_84877380_84878469_84878565_84879095_84879241_84882358_84882496_84882594_84882706_84883144_84883232_84884585_84884745_84890892_84890974_84893724_84893905_84896812_84896922_84898187_84898301_84898964_84899145_84903635_84903734_84905325_84905504_84906562_84906719_84908112_84908211_84914248_84914391_84918184_84918331_84919065_84919196_84923604_84923692_84925359_84925495_84927051
ENSMUSG00000040857.16_0	chr7	-	2056	4	FSM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAACAGAGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24949661	24943344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24944957_24945058_24945175_24945512_24945748_24949568
ENSMUSG00000040857.16_1	chr7	-	1964	3	ISM	ENSMUSG00000040857.16	ENST00000440177.6	2067	4	3917	7	3917	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGAACAGAGGCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	24945748	24943344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_24944957_24945058_24945175_24945512
ENSMUSG00000040859.15_0	chr4	+	2801	11	FSM	ENSMUSG00000040859.15	ENSMUST00000048162.10	2823	11	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAACAGAAGCGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	129355384	129382280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360615_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUSG00000040859.15_1	chr4	+	1501	11	FSM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGCTCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	129355471	129381015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUSG00000040859.15_2	chr4	+	2526	10	FSM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAGGAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	129355475	129382209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129355499_129355734_129355796_129359022_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_3	chr4	+	1468	10	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	269	0	265	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGCTCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	129355740	129381015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_129355796_129359022_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUSG00000040859.15_4	chr4	+	2499	9	ISM	ENSMUSG00000040859.15	ENST00000341071.11	2539	10	263	13	263	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAGGAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	129355738	129382209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_129355796_129359022_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129367942_129380797
ENSMUSG00000040859.15_6	chr4	+	1415	9	ISM	ENSMUSG00000040859.15	ENST00000446293.6	1501	11	3549	0	3545	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTCTGCTCACACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	129359020	129381015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_129359140_129360563_129360784_129362786_129362842_129365719_129365836_129366216_129366286_129366490_129366570_129367567_129368039_129378829_129378934_129380833
ENSMUSG00000040860.17_0	chr4	-	6270	36	FSM	ENSMUSG00000040860.17	ENSMUST00000097816.9	6273	36	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	140787861	140743950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140785372_140785509_140787833
ENSMUSG00000040860.17_1	chr4	-	6576	37	FSM	ENSMUSG00000040860.17	ENSMUST00000102491.10	6582	37	3	3	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	140781030	140743950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140774082_140774167_140774254_140774441_140778351_140778507_140780260_140780403_140780830
ENSMUSG00000040860.17_3	chr4	-	6244	35	FSM	ENSMUSG00000040860.17	ENSMUST00000168157.8	6244	35	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGGCTGTCCACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	140785510	140743950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140744444_140745164_140745345_140745560_140745693_140745978_140746180_140746473_140746624_140747018_140747244_140747584_140747801_140748964_140749129_140749354_140749476_140749578_140749749_140752506_140752856_140753411_140753580_140755651_140755812_140756408_140756648_140757003_140757148_140757459_140757595_140758202_140758383_140760112_140760283_140761284_140761413_140761669_140761864_140762463_140762695_140762997_140763145_140763994_140764140_140765158_140765342_140768270_140768471_140768933_140769165_140769462_140769547_140770231_140770329_140770718_140770956_140773251_140773359_140773702_140773869_140773946_140774009_140778351_140778507_140780260_140780403_140785372
ENSMUSG00000040865.16_0	chr1	-	13429	12	FSM	ENSMUSG00000040865.16	ENSMUST00000172416.8	13438	12	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCTTGCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	63153423	63086965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132600_63132798_63132890_63144814_63144919_63153369
ENSMUSG00000040865.16_1	chr1	-	13442	11	ISM	ENSMUSG00000040865.16	ENSMUST00000165066.8	13529	12	8532	6	8532	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCTTGCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	63144894	63086965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63144814
ENSMUSG00000040865.16_2	chr1	-	13669	11	FSM	ENSMUSG00000040865.16	ENSMUST00000097718.9	13675	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCTTGCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	63153826	63086965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63153519
ENSMUSG00000040865.16_3	chr1	-	13521	12	FSM	ENSMUSG00000040865.16	ENSMUST00000165066.8	13529	12	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCTTGCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	63153424	63086965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132691_63132798_63132890_63144814_63144919_63153369
ENSMUSG00000040865.16_4	chr1	-	13372	11	ISM	ENSMUSG00000040865.16	ENSMUST00000172416.8	13438	12	8511	6	8511	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAACCTTGCTTTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	63144915	63086965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_63098305_63100198_63100357_63101194_63101413_63104862_63104997_63107342_63107453_63113480_63113706_63118111_63118221_63124826_63125558_63132443_63132600_63132798_63132890_63144814
ENSMUSG00000040866.14_0	chr7	+	1540	5	FSM	ENSMUSG00000040866.14	ENST00000600188.5	1561	5	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCAAGCTCCTTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	18791422	18808199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18791698_18799231_18799997_18801013_18801159_18801958_18802077_18807962
ENSMUSG00000040875.13_0	chr9	+	2201	10	FSM	ENSMUSG00000040875.13	ENST00000438237.6	2216	10	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACCCTGGCCTGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	114807606	115059079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114808033_114890900_114891077_114896313_114896394_114996149_114996361_115004995_115005151_115036581_115036732_115045616_115046098_115052660_115052848_115055748_115055932_115058927
ENSMUSG00000040877.17_0	chr12	+	920	2	FSM	ENSMUSG00000040877.17	ENST00000554175.5	936	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCAAGGTAAGACAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	108860344	108864644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108860455_108863834
ENSMUSG00000040883.19_0	chr9	-	776	4	FSM	ENSMUSG00000040883.19	ENSMUST00000046831.11	785	4	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21838750	21832305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838587
ENSMUSG00000040883.19_1	chr9	-	852	4	FSM	ENSMUSG00000040883.19	ENSMUST00000238930.2	862	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCCATGGTCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21838821	21832305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21832646_21837286_21837451_21837544_21837654_21838582
ENSMUSG00000040888.11_0	chr17	-	1690	2	FSM	ENSMUSG00000040888.11	ENSMUST00000234859.2	1706	2	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGGGGCTGGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	24914669	24912168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24913417_24914227
ENSMUSG00000040888.11_1	chr17	-	1760	3	FSM	ENSMUSG00000040888.11	ENSMUST00000046839.10	1776	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTAGGGGCTGGTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	24915119	24912168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24913417_24914227_24914425_24914804
ENSMUSG00000040888.11_6	chr17	-	585	3	FSM	ENSMUSG00000040888.11	ENST00000248114.7	605	3	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGAAGATTACCAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	24915032	24913258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24913412_24914220_24914425_24914804
ENSMUSG00000040904.11_0	chr11	-	1606	8	FSM	ENSMUSG00000040904.11	ENSMUST00000176268.2	1621	8	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACATTTTTATACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	70130617	70126078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70126295_70126521_70126627_70126849_70127038_70127702_70127805_70128356_70128452_70128609_70129297_70129763_70129841_70130481
ENSMUSG00000040907.16_0	chr7	-	3474	23	FSM	ENSMUSG00000040907.16	ENST00000602133.5	3482	23	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAGATGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24705185	24677599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705120
ENSMUSG00000040907.16_1	chr7	-	3404	22	ISM	ENSMUSG00000040907.16	ENST00000602133.5	3482	23	4610	5	4610	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAGATGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24700578	24677599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496
ENSMUSG00000040907.16_2	chr7	-	3624	23	FSM	ENSMUSG00000040907.16	ENSMUST00000196684.2	3642	23	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAGATGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24705355	24677599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700623_24705179
ENSMUSG00000040907.16_5	chr7	-	3592	23	FSM	ENSMUSG00000040907.16	ENSMUST00000080882.11	3621	23	21	8	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAAAGATGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24705362	24677599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24678002_24678338_24678431_24678719_24678822_24679434_24679566_24679975_24680122_24680943_24681068_24681166_24681322_24686859_24687029_24687402_24687554_24688992_24689130_24689213_24689390_24689787_24689981_24693556_24693692_24693774_24693885_24693960_24694160_24696556_24696826_24696937_24697056_24698098_24698234_24698324_24698439_24700001_24700206_24700344_24700405_24700496_24700584_24705179
ENSMUSG00000040913.12_0	chr19	-	2054	9	FSM	ENSMUSG00000040913.12	ENSMUST00000046869.11	2068	9	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTGGTTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45648742	45566697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303_45619399_45624173_45624307_45624701_45624888_45628864_45628961_45648214
ENSMUSG00000040913.12_1	chr19	-	1290	5	FSM	ENSMUSG00000040913.12	ENSMUST00000160718.9	1295	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATCTGGTTCTTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	45619577	45566697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45567365_45567559_45567702_45568091_45568233_45580167_45580234_45619303
ENSMUSG00000040918.13_1	chr1	+	3543	6	FSM	ENSMUSG00000040918.13	ENSMUST00000044021.12	3571	6	24	4	15	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAGAATTATTTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	164076638	164092950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164077026_164084315_164084919_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_3	chr1	+	3407	6	FSM	ENSMUSG00000040918.13	ENSMUST00000159230.8	3432	6	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAAATTTTCCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	164076640	164092930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164077026_164084315_164084805_164088360_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040918.13_6	chr1	+	3407	6	FSM	ENSMUSG00000040918.13	ENST00000236137.10	3415	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGAATTATTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164076770	164092949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_164077026_164084315_164084919_164088363_164088587_164089615_164089809_164090188_164090331_164090958
ENSMUSG00000040928.16_0	chr4	-	4421	7	FSM	ENSMUSG00000040928.16	ENSMUST00000106061.9	4426	7	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATATGTACTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	129083334	129041801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129076326_129077393_129077511_129083164
ENSMUSG00000040928.16_1	chr4	-	4049	9	FSM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATATGTACTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	129083366	129041801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393_129077511_129083334
ENSMUSG00000040928.16_2	chr4	-	4019	8	ISM	ENSMUSG00000040928.16	ENSMUST00000072431.13	4059	9	5860	4	-1189	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATATGTACTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	129077512	129041801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076001_129076326_129077393
ENSMUSG00000040928.16_3	chr4	-	4079	9	FSM	ENSMUSG00000040928.16	ENSMUST00000106059.8	4084	9	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCATATGTACTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	129083519	129041801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129044885_129049217_129049303_129072033_129072126_129073981_129074065_129075534_129075634_129075759_129075894_129076124_129076326_129077393_129077511_129083334
ENSMUSG00000040929.18_0	chr19	-	2718	17	FSM	ENSMUSG00000040929.18	ENSMUST00000174850.8	2743	17	14	11	14	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTAAAATATTTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	27988526	27745549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_27746094_27748028_27748072_27764013_27764168_27771010_27771220_27777516_27777667_27779781_27779880_27783587_27783743_27784192_27784309_27790977_27791091_27792884_27793007_27803432_27803553_27808010_27808193_27814806_27814882_27827110_27827370_27844912_27845011_27878178_27878304_27988371
ENSMUSG00000040936.16_0	chr9	-	4089	37	FSM	ENSMUSG00000040936.16	ENSMUST00000171923.8	4103	37	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTCATGTGTCAAACC	NA	NA	NA	NA	NA	NA	NA	NA	121106253	120793523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_120793675_120795462_120795549_120873751_120873938_120902983_120903083_120910629_120910797_120932612_120932719_120955515_120955565_120970899_120970993_120974052_120974198_120974400_120974453_120981155_120981251_120981343_120981396_120986038_120986096_120986231_120986354_120989335_120989470_120997249_120997378_121017283_121017467_121021699_121021862_121033789_121033874_121037222_121037331_121073431_121073511_121077990_121078038_121079927_121080110_121081718_121081780_121084182_121084288_121085363_121085461_121086144_121086215_121086365_121086485_121087794_121087888_121089074_121089151_121090973_121091058_121091633_121091736_121092694_121092858_121095273_121095414_121095579_121095680_121101938_121102123_121106125
ENSMUSG00000040938.17_0	chr11	+	1932	7	FSM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACCCTCTTGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70103577	70107233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70103610_70104504_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_2	chr11	+	1890	6	ISM	ENSMUSG00000040938.17	ENSMUST00000126388.8	1938	7	937	6	-221	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACCCTCTTGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70104514	70107233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70104704_70104919_70105091_70105191_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_4	chr11	+	1738	5	FSM	ENSMUSG00000040938.17	ENSMUST00000171032.8	1754	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACCCTCTTGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70104746	70107233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70105091_70105327_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040938.17_6	chr11	+	1773	4	FSM	ENSMUSG00000040938.17	ENSMUST00000094055.10	1788	4	8	7	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTACCCTCTTGAGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	70104948	70107233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70105539_70105780_70105925_70106109_70106878_70106962
ENSMUSG00000040940.19_0	chr7	+	3490	30	FSM	ENSMUSG00000040940.19	ENSMUST00000117796.8	3508	30	7	11	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGGAAAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24602343	24626006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24618608_24618777_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040940.19_3	chr7	+	3194	29	FSM	ENSMUSG00000040940.19	ENSMUST00000047873.16	3212	29	10	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGGAAAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24602471	24626006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040940.19_5	chr7	+	3362	31	FSM	ENSMUSG00000040940.19	ENSMUST00000098683.11	3375	31	5	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGGAAAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24602480	24626006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24617944_24617957_24618608_24618777_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040940.19_7	chr7	+	3180	29	FSM	ENSMUSG00000040940.19	ENSMUST00000206508.2	3195	29	6	9	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAAAGATCTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24602486	24626010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24602554_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616228_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040940.19_8	chr7	+	3192	29	FSM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	11	11	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGGAAAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24603842	24626006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24603923_24607140_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040940.19_9	chr7	+	3115	28	ISM	ENSMUSG00000040940.19	ENSMUST00000117419.8	3214	29	3306	11	3306	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAAGGAAAGATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24607137	24626006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_24607183_24607278_24607360_24607735_24607850_24611481_24611581_24611734_24611778_24611979_24612227_24612564_24612595_24612823_24612924_24613044_24613142_24615442_24615479_24616225_24616367_24617319_24617426_24619055_24619202_24621295_24621443_24621749_24621833_24621965_24622092_24622231_24622347_24622434_24622536_24622788_24622867_24623083_24623160_24623227_24623396_24624220_24624309_24624400_24624488_24624676_24624745_24624825_24624913_24625208_24625373_24625448_24625549_24625664
ENSMUSG00000040943.13_0	chr3	-	9175	11	FSM	ENSMUSG00000040943.13	ENSMUST00000098603.8	9179	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGTATTCTGTTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	133250151	133169443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ENSMUSG00000040943.13_2	chr3	-	9000	12	FSM	ENSMUSG00000040943.13	ENSMUST00000196398.5	9021	12	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTGAGATTTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	133250112	133169603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_133173952_133175036_133175401_133177100_133177239_133179356_133179447_133182245_133182397_133185102_133185127_133185893_133186103_133187094_133187189_133188999_133189079_133191272_133194479_133219789_133219935_133249960
ENSMUSG00000040945.14_0	chr4	+	3986	15	FSM	ENSMUSG00000040945.14	ENSMUST00000071169.9	3999	15	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	140427858	140450525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140428061_140428454_140428516_140428821_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_3	chr4	+	3756	13	FSM	ENSMUSG00000040945.14	ENSMUST00000038893.6	3767	13	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCGTTGGCTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	140428788	140450525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140428962_140429457_140429747_140435261_140435356_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445042_140445650_140445724_140447855_140447934_140448410
ENSMUSG00000040945.14_9	chr4	+	1060	9	FSM	ENSMUSG00000040945.14	ENST00000492126.1	1061	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAAGCCACTTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	140435262	140457704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140435361_140437643_140437788_140439441_140439574_140439896_140439986_140440709_140440825_140443176_140443344_140444330_140444512_140444935_140445046_140457680
ENSMUSG00000040950.14_0	chr11	+	1564	10	FSM	ENSMUSG00000040950.14	ENSMUST00000041550.12	1586	10	10	12	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAATAAATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70021164	70028364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70021269_70024944_70025090_70025877_70025989_70026416_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266_70027419_70027495_70027603_70027746
ENSMUSG00000040950.14_1	chr11	+	1626	9	NIC	ENSMUSG00000040950.14	novel	1635	9	NA	NA	0	-10	intron_retention	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAATAAATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70021249	70028364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_70021269_70024944_70025090_70025874_70025989_70026416_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266_70027419_70027495
ENSMUSG00000040950.14_2	chr11	+	1596	8	ISM	ENSMUSG00000040950.14	ENSMUST00000165951.8	1635	9	3706	10	3706	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAAATAAATTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70024955	70028364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70025090_70025874_70025989_70026416_70026513_70026595_70026668_70026746_70026819_70027076_70027164_70027266_70027419_70027495
ENSMUSG00000040952.17_0	chr7	+	755	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108430.10	774	6	11	8	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	19175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAATCCTGGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24583806	24589223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24584093_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUSG00000040952.17_6	chr7	+	616	6	FSM	ENSMUSG00000040952.17	ENSMUST00000108429.8	633	6	9	8	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAATCCTGGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	24584147	24589223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24584295_24584560_24584632_24584876_24584978_24587706_24587891_24588331_24588387_24589165
ENSMUSG00000040964.17_0	chr4	-	3497	18	FSM	ENSMUSG00000040964.17	ENSMUST00000105797.9	3507	18	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTGGGCCCTGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	140309127	140241803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140306578_140306759_140307699_140307778_140308135_140308243_140308916
ENSMUSG00000040964.17_1	chr4	-	3820	22	FSM	ENSMUSG00000040964.17	ENSMUST00000105798.8	3839	22	19	0	19	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGGGGTTTATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	140311635	140241795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140296066_140296082_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140311443
ENSMUSG00000040964.17_2	chr4	-	4374	27	FSM	ENSMUSG00000040964.17	ENSMUST00000097820.9	4382	27	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGCCCTGTGGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	140376065	140241801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_140242843_140244056_140244180_140248475_140248651_140264079_140264229_140269944_140270100_140271549_140271774_140274310_140274398_140279838_140279961_140290024_140290126_140291497_140291626_140292442_140292559_140295649_140295832_140297567_140297714_140302594_140302769_140304364_140304458_140305551_140305669_140306578_140306759_140307699_140307778_140308135_140308243_140311134_140311244_140319128_140319299_140320403_140320488_140321456_140321549_140337841_140337876_140338537_140338724_140344223_140344304_140375944
ENSMUSG00000040978.5_0	chr11	+	2360	7	FSM	ENSMUSG00000040978.5	ENSMUST00000043285.5	2400	7	30	10	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGTAATGCAGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	8998623	9019346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_8999201_9002693_9002880_9004209_9004319_9006421_9006579_9009910_9010009_9011165_9011387_9018334
ENSMUSG00000040978.5_2	chr11	+	1578	5	FSM	ENSMUSG00000040978.5	ENST00000348904.4	1603	5	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAATATAGCACT	NA	NA	NA	NA	NA	NA	NA	NA	9004218	9019332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_9004319_9006421_9006579_9009910_9010009_9011165_9011391_9018334
ENSMUSG00000040985.14_0	chr11	-	1105	9	FSM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	1	18	1	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATGAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	8988315	8966077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330_8979491_8980234_8980276_8981434_8981539_8988256
ENSMUSG00000040985.14_1	chr11	-	1040	8	ISM	ENSMUSG00000040985.14	ENST00000395572.6	1124	9	6784	18	6784	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAAAAATGAAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	8981532	8966077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_8966357_8968146_8968240_8971751_8971920_8973293_8973410_8978032_8978118_8979330_8979491_8980234_8980276_8981434
ENSMUSG00000040987.16_0	chr7	+	1969	6	FSM	ENSMUSG00000040987.16	ENSMUST00000227379.2	1998	6	25	4	25	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGCAGGTTTGATTAGC	NA	NA	NA	NA	NA	NA	NA	NA	18573915	18597529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18574017_18589864_18590129_18590330_18590607_18592065_18592345_18592448_18592579_18596610
ENSMUSG00000040990.18_1	chrX	+	7297	18	FSM	ENSMUSG00000040990.18	ENSMUST00000112456.9	7317	18	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAGGAGTAAGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	158410280	158761058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158410688_158466539_158466698_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_12	chrX	+	3900	13	FSM	ENSMUSG00000040990.18	ENSMUST00000112451.8	3914	13	14	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATTTTTGTTCAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	158623477	158758660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158623608_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040990.18_7	chrX	+	2960	17	FSM	ENSMUSG00000040990.18	ENSMUST00000080394.13	2980	17	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAAGTGAAAACAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	158491606	158757153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158491740_158547007_158547132_158586715_158586820_158599572_158599703_158611369_158611576_158648320_158648397_158661117_158661213_158684671_158684780_158696984_158697037_158700231_158700313_158702753_158702914_158726192_158726279_158741208_158741319_158744760_158744890_158749209_158749479_158754857_158754922_158756120
ENSMUSG00000040997.15_0	chr14	+	2484	7	FSM	ENSMUSG00000040997.15	ENSMUST00000180359.8	2508	7	24	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAGTATTAACTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	54491668	54506532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54491929_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_1	chr14	+	2395	7	FSM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATGACACTGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	54496693	54506620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54496777_54499082_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040997.15_3	chr14	+	2312	6	ISM	ENSMUSG00000040997.15	ENSMUST00000041197.13	2401	7	2394	1	2394	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATGACACTGTTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	54499082	54506620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_54499172_54500107_54500481_54500625_54500781_54502737_54502850_54504451_54504639_54505224
ENSMUSG00000040998.19_0	chr3	-	4603	12	FSM	ENSMUSG00000040998.19	ENSMUST00000042744.16	4619	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCACCTGCCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132656043	132587512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
ENSMUSG00000040998.19_10	chr3	-	3380	12	FSM	ENSMUSG00000040998.19	ENSMUST00000117456.8	3383	12	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	132655575	132588462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655538
ENSMUSG00000040998.19_15	chr3	-	1985	12	FSM	ENSMUSG00000040998.19	ENST00000506666.5	1991	12	5	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGTGGGCCTGCTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	132655800	132589893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132620133_132620227_132623221_132623315_132653807_132653909_132655733
ENSMUSG00000040998.19_2	chr3	-	4517	11	FSM	ENSMUSG00000040998.19	ENSMUST00000117811.8	4532	11	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCACCTGCCTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	132656044	132587512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132653807_132653909_132655733
ENSMUSG00000040998.19_7	chr3	-	3575	13	FSM	ENSMUSG00000040998.19	ENSMUST00000042729.16	3601	13	7	19	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	132655914	132588462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132590275_132591516_132591774_132596524_132596624_132597162_132597250_132610418_132610815_132612107_132612231_132612455_132612591_132614103_132614224_132615656_132615777_132623221_132623315_132637342_132637394_132653807_132653909_132655733
ENSMUSG00000041014.18_0	chr14	-	2700	7	FSM	ENSMUSG00000041014.18	ENST00000372141.7	2712	7	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGTACATAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38390246	38090919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_38092998_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286_38231314_38390174
ENSMUSG00000041014.18_1	chr14	-	2628	6	ISM	ENSMUSG00000041014.18	ENST00000372141.7	2712	7	158936	9	158936	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGTACATAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38231313	38090919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_38092998_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286
ENSMUSG00000041014.18_10	chr14	-	2565	8	FSM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATTGTGTTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	38390246	38091126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286_38231314_38390174
ENSMUSG00000041014.18_11	chr14	-	2465	6	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	261075	12	261075	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACAAATTGTGTTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	38129174	38091128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070
ENSMUSG00000041014.18_12	chr14	-	2493	7	ISM	ENSMUSG00000041014.18	ENST00000372142.6	2578	8	158936	10	158936	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAATTGTGTTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	38231313	38091126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_38092998_38093233_38093306_38098290_38098462_38103580_38103709_38119186_38119308_38129070_38129174_38231286
ENSMUSG00000041014.18_2	chr14	-	2602	5	ISM	ENSMUSG00000041014.18	ENST00000372141.7	2712	7	261075	9	261075	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGTACATAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38129174	38090919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_38092998_38098290_38098462_38103580_38103709_38119186_38119308_38129070
ENSMUSG00000041025.16_0	chr4	+	2016	12	FSM	ENSMUSG00000041025.16	ENSMUST00000123827.9	2036	12	1	19	1	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTATGCAAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	139257859	139344374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139257967_139259001_139259172_139259591_139259702_139263833_139263944_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
ENSMUSG00000041025.16_2	chr4	+	5222	11	FSM	ENSMUSG00000041025.16	ENSMUST00000040023.16	5227	11	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACATGGTTTATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139259001	139347687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139259172_139259591_139259702_139263833_139263944_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
ENSMUSG00000041025.16_3	chr4	+	5706	9	FSM	ENSMUSG00000041025.16	ENSMUST00000174078.2	5716	9	4	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACATGGTTTATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	139302034	139347687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139302909_139330523_139330585_139332309_139332406_139333732_139333874_139334915_139335056_139341104_139341226_139341336_139341430_139342241_139342373_139343638
ENSMUSG00000041028.17_0	chr14	-	3176	9	FSM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATATAAAATGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	36857209	36842060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36857151
ENSMUSG00000041028.17_1	chr14	-	3115	8	ISM	ENSMUSG00000041028.17	ENSMUST00000165649.4	3188	9	1452	12	1339	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATATAAAATGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	36855757	36842060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589
ENSMUSG00000041028.17_10	chr14	-	2552	9	FSM	ENSMUSG00000041028.17	ENSMUST00000042564.17	2573	9	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGTGGCTATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36857079	36842784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36844184_36847116_36847289_36847858_36848048_36849543_36849653_36852592_36852735_36853494_36853607_36855127_36855228_36855589_36855761_36856921
ENSMUSG00000041035.10_0	chr19	+	1342	6	FSM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATTACAATGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	45549056	45566718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45549147_45553349_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUSG00000041035.10_1	chr19	+	1253	5	ISM	ENSMUSG00000041035.10	ENSMUST00000047057.9	1353	6	4295	8	4295	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATTACAATGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	45553348	45566718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_45553431_45560323_45560449_45560843_45560978_45565431_45565535_45565909
ENSMUSG00000041037.9_0	chr7	+	6070	3	FSM	ENSMUSG00000041037.9	ENSMUST00000049020.9	6083	3	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATGCTATTATGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24230116	24238015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24230330_24230808_24231341_24232690
ENSMUSG00000041040.13_1	chr1	+	5500	8	FSM	ENSMUSG00000041040.13	ENSMUST00000036540.12	5532	8	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTTTCTTTCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59952196	60024505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59952912_59988211_59988364_59992093_59992184_59997480_59997595_60008112_60008257_60009644_60009871_60014041_60014163_60020567
ENSMUSG00000041046.8_0	chr11	+	1228	3	FSM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGGTATTTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6608522	6627472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6608628_6624762_6624896_6626482
ENSMUSG00000041046.8_1	chr11	+	1124	2	ISM	ENSMUSG00000041046.8	ENSMUST00000045374.8	1233	3	16241	3	16241	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGTGGTATTTCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	6624761	6627472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_6624896_6626482
ENSMUSG00000041057.11_0	chr17	+	3430	18	FSM	ENSMUSG00000041057.11	ENSMUST00000047086.10	3450	18	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCGCGTGTCTCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	71923223	71966020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71923481_71932347_71932486_71933767_71933890_71937155_71937277_71938999_71939137_71940618_71940722_71943551_71943617_71945303_71945476_71947228_71947316_71948281_71948414_71949699_71949829_71955767_71955855_71957011_71957044_71957562_71957627_71959775_71959890_71960447_71960518_71964335_71964386_71964470
ENSMUSG00000041058.16_0	chr4	-	6421	25	FSM	ENSMUSG00000041058.16	ENSMUST00000108246.9	6440	25	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACACTAAAAGGAAAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	19708985	19608313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_19611814_19618284_19618358_19619155_19619253_19621927_19622033_19623101_19623223_19627632_19627774_19627871_19628006_19631045_19631206_19635253_19635343_19638604_19638677_19638774_19638851_19639951_19640081_19640194_19640280_19640360_19640416_19641733_19641909_19643365_19643462_19650115_19650441_19659562_19659748_19661965_19662033_19662121_19662260_19672418_19672544_19673155_19673295_19678344_19678436_19687790_19687887_19708838
ENSMUSG00000041064.15_0	chr9	+	3660	12	FSM	ENSMUSG00000041064.15	ENSMUST00000239405.2	3680	12	15	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTAACTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	65494501	65503239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ENSMUSG00000041064.15_1	chr9	+	3299	13	FSM	ENSMUSG00000041064.15	ENSMUST00000131483.3	3309	13	0	10	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTAACTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	65494502	65503239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65494534_65494893_65495677_65496286_65496420_65496496_65496623_65496732_65496887_65496994_65497110_65497229_65497337_65499001_65499142_65499405_65499513_65500543_65500632_65500738_65500885_65501668_65501861_65502062
ENSMUSG00000041075.9_0	chr1	+	4508	1	FSM	ENSMUSG00000041075.9	ENSMUST00000114246.4	4532	1	16	8	16	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATACAAAGTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	59521598	59526106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59521600_59526100
ENSMUSG00000041079.13_0	chr16	-	1991	5	FSM	ENSMUSG00000041079.13	ENSMUST00000039101.12	2009	5	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTAAACAATCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	87237456	87230307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_87231515_87233460_87233824_87233951_87234020_87234181_87234403_87237324
ENSMUSG00000041084.9_0	chr3	-	1047	4	FSM	ENSMUSG00000041084.9	ENSMUST00000043937.9	1067	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTTAGAGTGTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	130503082	130489569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_130490128_130496964_130497163_130499598_130499693_130502885
ENSMUSG00000041096.14_0	chrX	-	2677	7	FSM	ENSMUSG00000041096.14	ENSMUST00000044509.7	2696	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATTCAAAGTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	151125414	151119862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_151120562_151121720_151122389_151122628_151122724_151122857_151123004_151123081_151123194_151123298_151123377_151124535
ENSMUSG00000041112.18_0	chr13	+	5428	22	FSM	ENSMUSG00000041112.18	ENSMUST00000072519.7	5464	22	29	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAATTTGCTGATATTC	NA	NA	NA	NA	NA	NA	NA	NA	20274817	20792516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_20274942_20369523_20369675_20392303_20392345_20393308_20393382_20425742_20425794_20435173_20435344_20445726_20445763_20458689_20458790_20464981_20465134_20467081_20467161_20470889_20470941_20472060_20472184_20474531_20474664_20526537_20526643_20557251_20557361_20633639_20633777_20748593_20748758_20756514_20756628_20766388_20766497_20773813_20773897_20784349_20784428_20789268
ENSMUSG00000041115.17_0	chrX	+	6010	14	FSM	ENSMUSG00000041115.17	ENST00000675719.1	6022	14	10	2	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTGGCCTCTGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	150927243	151008231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150928176_150985903_150986166_150986927_150987330_150991765_150992662_150994205_150994368_150995017_150995141_150996282_150996450_150998496_150998637_150999336_150999463_151001872_151001973_151002727_151002890_151004642_151004817_151005278_151005329_151005917
ENSMUSG00000041115.17_14	chrX	+	827	2	FSM	ENSMUSG00000041115.17	ENST00000639161.2	837	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTCTGATGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	150963999	150977599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150964089_150976861
ENSMUSG00000041117.9_0	chr7	+	4792	1	FSM	ENSMUSG00000041117.9	ENSMUST00000094805.5	4809	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTGGCTTCTTGTTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	16726642	16731434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16726600_16731400
ENSMUSG00000041119.13_0	chr17	+	2031	20	FSM	ENSMUSG00000041119.13	ENST00000291539.11	2050	20	10	9	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAAATGGGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31605178	31695124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31605331_31633074_31633146_31634253_31634332_31639218_31639263_31661899_31662037_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_10	chr17	+	1762	18	FSM	ENSMUSG00000041119.13	ENST00000398234.7	1777	18	6	9	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAAATGGGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31605239	31695124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31605331_31634253_31634332_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041119.13_19	chr17	+	1661	17	FSM	ENSMUSG00000041119.13	ENST00000398224.3	1672	17	2	9	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAAATGGGTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	31605262	31695124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_31605331_31639218_31639263_31662139_31662195_31662811_31662883_31667340_31667426_31672375_31672455_31674027_31674103_31678048_31678136_31678874_31678980_31679152_31679236_31680544_31680702_31685328_31685443_31688767_31688873_31689654_31689784_31690732_31690829_31692131_31692214_31694898
ENSMUSG00000041120.7_0	chr4	-	1783	4	FSM	ENSMUSG00000041120.7	ENSMUST00000042844.7	1793	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3803	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGGACTGGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	138820294	138809594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138810914_138812551_138812664_138812764_138812960_138820137
ENSMUSG00000041124.12_0	chr9	+	2791	3	FSM	ENSMUSG00000041124.12	ENSMUST00000212075.2	2800	3	0	9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATTTTCCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4376561	4386861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_4376624_4383536_4384143_4384738
ENSMUSG00000041124.12_3	chr9	+	2703	2	FSM	ENSMUSG00000041124.12	ENSMUST00000047173.10	2731	2	44	-16	44	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAAAGTTTATCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	4383578	4386877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_4384143_4384738
ENSMUSG00000041126.17_0	chr11	-	1619	5	FSM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCATGTGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	6394434	6377233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375_6389454_6394336
ENSMUSG00000041126.17_1	chr11	-	1522	4	ISM	ENSMUSG00000041126.17	ENSMUST00000109737.9	1633	5	4989	5	4898	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGCCATGTGTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	6389454	6377233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_6378433_6379095_6379226_6383723_6383838_6389375
ENSMUSG00000041126.17_13	chr11	-	482	3	ISM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	4914	6	4914	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTACTGTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6389438	6378143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_6378433_6379095_6379226_6389375
ENSMUSG00000041126.17_14	chr11	-	513	4	FSM	ENSMUSG00000041126.17	ENSMUST00000093346.6	519	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGTACTGTGTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	6394352	6378143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6378433_6379095_6379226_6389375_6389454_6394336
ENSMUSG00000041130.11_0	chr17	+	3259	12	FSM	ENSMUSG00000041130.11	ENSMUST00000047179.7	3283	12	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCACATAGCTGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	24888738	24900984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24888948_24895527_24895641_24896029_24896160_24896383_24896596_24896808_24897027_24897569_24897679_24898010_24898199_24898294_24898380_24898482_24899250_24899597_24899773_24899854_24900006_24900082
ENSMUSG00000041132.12_0	chr5	-	1889	5	FSM	ENSMUSG00000041132.12	ENSMUST00000016279.11	1905	5	8	8	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTTATATTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	150517982	150495116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_150496458_150497464_150497542_150499714_150499804_150500104_150500233_150517728
ENSMUSG00000041133.12_0	chrX	+	4676	25	FSM	ENSMUSG00000041133.12	ENSMUST00000045312.6	4691	25	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAATCCTCTAGCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	150799433	150845685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150799637_150805741_150805931_150806034_150806148_150809233_150809438_150809527_150809767_150810689_150810949_150811036_150811178_150811960_150812044_150812186_150812395_150816694_150816881_150816975_150817156_150819097_150819245_150819336_150819475_150820365_150820483_150820586_150820694_150824322_150824465_150829655_150829802_150829890_150830045_150830853_150830965_150841774_150841932_150842353_150842509_150842623_150842776_150843971_150844042_150844288_150844400_150844721
ENSMUSG00000041135.16_0	chr4	-	2678	11	FSM	ENSMUSG00000041135.16	ENSMUST00000037035.12	2692	11	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTGGTAATTAGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	16163633	16122732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_16123892_16124424_16124587_16127620_16127715_16129022_16129110_16132776_16132863_16138073_16138236_16139204_16139255_16151916_16152075_16155034_16155191_16158276_16158431_16163223
ENSMUSG00000041143.17_0	chr4	+	3296	17	FSM	ENSMUSG00000041143.17	ENSMUST00000050949.9	3318	17	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACCCTAAGGGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	138700231	138786472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138700599_138704518_138704634_138710931_138711077_138712442_138712562_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_1	chr4	+	1998	14	FSM	ENSMUSG00000041143.17	ENST00000294543.11	2009	14	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGCATCTGGACTACCT	NA	NA	NA	NA	NA	NA	NA	NA	138710986	138785830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138711077_138717852_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041143.17_8	chr4	+	1909	13	ISM	ENSMUSG00000041143.17	ENST00000294543.11	2009	14	6870	6	6870	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGCATCTGGACTACCT	NA	NA	NA	NA	NA	NA	NA	NA	138717851	138785830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_138718032_138723708_138723884_138725334_138725363_138737779_138737913_138746883_138746982_138747356_138747501_138748169_138748290_138748931_138749097_138750241_138750379_138757139_138757225_138779811_138779930_138781210_138781329_138785422
ENSMUSG00000041147.11_1	chr5	+	10507	27	FSM	ENSMUSG00000041147.11	ENSMUST00000202313.2	10517	27	4	6	4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGATTACTGGCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	150446112	150493206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150446362_150446639_150446745_150452934_150453163_150454533_150454643_150455148_150455199_150455519_150455561_150455755_150455868_150458057_150458108_150458903_150459016_150459495_150460603_150462113_150466923_150468359_150468456_150471405_150471476_150471953_150472301_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041147.11_9	chr5	+	7961	17	FSM	ENSMUSG00000041147.11	ENST00000380152.8	7969	17	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCACCCAGGCCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	150462130	150492793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150466923_150468359_150468456_150471405_150471476_150471953_150472348_150474296_150474479_150475671_150475860_150476401_150476573_150477619_150477975_150480325_150480482_150480565_150480711_150481854_150481977_150483468_150483662_150483892_150484057_150484149_150484289_150490352_150490595_150491071_150491234_150492403
ENSMUSG00000041153.10_0	chr4	-	2641	6	FSM	ENSMUSG00000041153.10	ENSMUST00000037198.10	2658	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGATTGTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	16013877	15997126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_15999001_16001929_16002022_16005356_16005549_16006356_16006494_16008600_16008756_16013686
ENSMUSG00000041161.9_0	chr4	-	1651	8	FSM	ENSMUSG00000041161.9	ENSMUST00000097830.4	1668	8	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGACAATGCCCTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	138641249	138622699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138623226_138624026_138624209_138624867_138624965_138625317_138625450_138629162_138629286_138632467_138632581_138636792_138636942_138640920
ENSMUSG00000041164.16_11	chr11	+	2662	17	FSM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTAAGTAGCCAGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6345628	6354280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_19	chr11	+	2601	16	ISM	ENSMUSG00000041164.16	ENST00000615423.1	2664	17	140	2	140	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTAAGTAGCCAGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6345768	6354280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349943_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039
ENSMUSG00000041164.16_2	chr11	+	4169	19	FSM	ENSMUSG00000041164.16	ENST00000309315.9	4180	19	5	6	5	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCAGGGAGCCAGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	6339377	6356306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6339514_6345567_6345679_6345757_6345873_6346231_6346435_6346664_6346849_6347028_6347290_6347506_6347687_6348261_6348340_6348555_6348725_6349503_6349649_6349722_6349934_6350769_6350876_6351097_6351256_6352406_6352475_6352803_6352873_6353119_6353365_6353785_6353956_6354039_6354283_6354989
ENSMUSG00000041168.11_0	chr17	-	2938	18	FSM	ENSMUSG00000041168.11	ENSMUST00000047226.10	2951	18	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCTAAGCCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	56933878	56921300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928923_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUSG00000041168.11_7	chr17	-	2516	18	FSM	ENSMUSG00000041168.11	ENST00000590729.5	2531	18	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATGACACAGGGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	56933595	56921391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56921564_56921635_56921801_56921873_56922092_56922249_56922416_56922503_56922645_56922925_56923043_56923129_56923253_56923358_56923447_56924753_56924933_56925317_56925457_56926171_56926393_56926985_56927070_56927222_56927353_56927513_56927576_56928971_56929159_56929433_56929554_56930136_56930226_56933480
ENSMUSG00000041180.14_0	chr19	+	3818	21	FSM	ENSMUSG00000041180.14	ENSMUST00000169036.9	3842	21	24	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGCACCCAACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	36532091	36597642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578828_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ENSMUSG00000041180.14_1	chr19	+	3798	21	FSM	ENSMUSG00000041180.14	ENSMUST00000047247.12	4731	21	40	893	40	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGCACCCAACCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	36532108	36597642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_36532316_36546772_36546903_36561335_36561475_36562295_36562399_36562843_36562934_36564765_36564831_36572608_36572655_36574476_36574587_36576286_36576436_36576995_36577120_36578831_36578929_36581649_36581758_36582567_36582701_36583785_36583875_36586664_36586824_36588763_36588839_36589543_36589632_36589716_36589824_36591747_36591864_36592899_36593044_36596123
ENSMUSG00000041187.17_0	chr7	+	3236	19	FSM	ENSMUSG00000041187.17	ENSMUST00000168093.9	3251	19	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAATGAAGCACCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	16576828	16604284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16576959_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUSG00000041187.17_2	chr7	+	3145	19	FSM	ENSMUSG00000041187.17	ENST00000433867.5	3156	19	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGCCAGGGAAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	16576850	16604046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16577128_16577406_16577789_16579743_16579883_16581525_16581658_16582649_16582805_16582905_16583132_16583949_16584028_16584118_16584273_16587179_16587298_16587875_16587954_16589619_16589879_16590184_16590238_16590750_16590824_16591675_16591783_16592303_16592466_16597865_16597965_16599611_16599880_16603412_16603499_16603747
ENSMUSG00000041189.10_0	chr11	-	2134	11	FSM	ENSMUSG00000041189.10	ENSMUST00000045971.9	2155	11	8	13	8	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGATTAATCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	69686761	69674874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69675588_69675875_69676024_69676532_69676706_69677706_69677931_69683524_69683735_69684290_69684439_69684709_69684819_69684975_69685086_69685794_69685840_69686420_69686561_69686647
ENSMUSG00000041193.16_0	chr4	-	2129	6	FSM	ENSMUSG00000041193.16	ENSMUST00000030524.14	2131	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCACATGTTTTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	138590778	138526559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138527973_138528662_138528770_138531817_138531963_138533495_138533546_138546310_138546427_138590480
ENSMUSG00000041199.4_0	chr17	+	1732	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237183.2	1743	6	3	8	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	25946646	25950430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25946822_25947225_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUSG00000041199.4_1	chr17	+	1730	6	FSM	ENSMUSG00000041199.4	ENSMUST00000237785.2	1761	6	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATCAATCTTGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	25946712	25950423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25946822_25947154_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUSG00000041199.4_2	chr17	+	1727	6	FSM	ENSMUSG00000041199.4	ENSMUST00000047273.3	1745	6	10	8	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTTGAGAGTGACCATGA	NA	NA	NA	NA	NA	NA	NA	NA	25946700	25950430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25946822_25947176_25947366_25947496_25947621_25947799_25947903_25948041_25948144_25949342
ENSMUSG00000041199.4_3	chr17	+	810	4	FSM	ENSMUSG00000041199.4	ENST00000565809.5	825	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGGCCTCTGGGCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	25947189	25949750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25947366_25947496_25947621_25948041_25948144_25949342
ENSMUSG00000041203.10_0	chr8	+	893	3	FSM	ENSMUSG00000041203.10	ENSMUST00000047281.10	902	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	85753459	85756914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85753864_85756167_85756246_85756503
ENSMUSG00000041203.10_2	chr8	+	794	3	FSM	ENSMUSG00000041203.10	ENST00000588213.1	810	3	11	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTGGAGTTTGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	85753527	85756906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85753841_85756167_85756246_85756503
ENSMUSG00000041203.10_6	chr8	+	745	2	FSM	ENSMUSG00000041203.10	ENST00000592273.5	757	2	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGTGCTTGGTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	85753529	85756914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85753864_85756503
ENSMUSG00000041215.17_0	chr16	+	5977	30	FSM	ENSMUSG00000041215.17	ENSMUST00000090052.11	5997	30	14	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	19959826	20051317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_19959986_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ENSMUSG00000041215.17_1	chr16	+	6069	31	FSM	ENSMUSG00000041215.17	ENSMUST00000115560.4	6112	31	37	6	37	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGGTTTTCTGAGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	19959853	20051317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_19959986_19969191_19969311_19971658_19971757_19972886_19972980_19975636_19975883_19977886_19978003_19980725_19980888_19989940_19990053_19993244_19993290_19998250_19998426_20005000_20005241_20008088_20008248_20009135_20009240_20011908_20012017_20012393_20012577_20022404_20022664_20024833_20024996_20026373_20026544_20027168_20027328_20028781_20028959_20030318_20030500_20032016_20032146_20033140_20033243_20037133_20037237_20038367_20038442_20040423_20040504_20041489_20041692_20046462_20046690_20047446_20047522_20048247_20048322_20049514
ENSMUSG00000041216.16_0	chr4	+	3582	6	FSM	ENSMUSG00000041216.16	ENSMUST00000038841.14	3604	6	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACACAAATAACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	9269324	9451677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_9269472_9281387_9282013_9350646_9350822_9424185_9424297_9429739_9429976_9449389
ENSMUSG00000041219.15_18	chr2	-	2130	11	FSM	ENSMUSG00000041219.15	ENST00000567348.5	2138	11	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGTATCTGGGGGATGCG	NA	NA	NA	NA	NA	NA	NA	NA	113678943	113664979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113665262_113667206_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUSG00000041219.15_6	chr2	-	4943	12	FSM	ENSMUSG00000041219.15	ENSMUST00000102545.8	4958	12	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGTGTTTAAATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	113678989	113661893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113664808_113665122_113665262_113667210_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599_113675671_113678305
ENSMUSG00000041219.15_8	chr2	-	2863	11	FSM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAAATAAAATTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	113675668	113663291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113664808_113665122_113665262_113667206_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591_113673689_113675599
ENSMUSG00000041219.15_9	chr2	-	2793	10	ISM	ENSMUSG00000041219.15	ENST00000543522.5	2877	11	1983	12	1983	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTAAATAAAATTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	113673687	113663291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_113664808_113665122_113665262_113667206_113667317_113667770_113667898_113670019_113670188_113671043_113671119_113671941_113672086_113672251_113672416_113673030_113673285_113673591
ENSMUSG00000041220.11_0	chr3	+	2583	4	FSM	ENSMUSG00000041220.11	ENSMUST00000199910.5	2610	4	9	18	-3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	129326012	129428602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041220.11_1	chr3	+	5929	5	FSM	ENSMUSG00000041220.11	ENSMUST00000071402.7	5951	5	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAACTGTTTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	129326048	129432136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129326145_129326296_129326418_129398689_129398822_129421931_129422084_129426708
ENSMUSG00000041225.17_0	chr18	-	4152	20	FSM	ENSMUSG00000041225.17	ENSMUST00000182213.8	4162	20	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAATGTGCGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	6135952	6025198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_6026731_6027574_6027678_6027959_6028095_6028193_6028272_6031729_6031829_6033140_6033258_6034449_6034553_6037017_6037117_6039353_6039456_6049276_6049359_6052861_6052924_6056978_6056994_6057516_6057592_6061846_6061973_6064340_6064422_6065704_6065846_6069830_6070092_6111684_6112440_6115813_6115851_6135803
ENSMUSG00000041229.16_0	chrX	+	3088	19	FSM	ENSMUSG00000041229.16	ENSMUST00000046962.11	3105	19	9	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATATGTAGAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	150304185	150408821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187
ENSMUSG00000041229.16_1	chrX	+	5718	22	FSM	ENSMUSG00000041229.16	ENSMUST00000046950.13	5728	22	0	10	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGGCAATTTTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	150304182	150416845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_150304316_150305383_150305573_150330390_150330477_150330810_150330920_150333826_150333988_150335481_150335624_150337129_150337317_150338968_150339132_150348367_150348456_150348954_150349062_150350647_150350740_150353337_150353428_150355361_150355665_150356408_150356513_150380296_150380476_150380895_150380982_150381498_150381633_150382269_150382581_150403859_150403956_150408187_150408298_150413145_150413483_150414334
ENSMUSG00000041231.16_0	chr11	-	2080	11	FSM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44361323	44345403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641_44357839_44361254
ENSMUSG00000041231.16_1	chr11	-	2010	10	ISM	ENSMUSG00000041231.16	ENSMUST00000102795.4	2088	11	3488	6	3488	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATTGGTTATCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	44357837	44345403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_44346443_44347190_44347319_44349031_44349149_44351547_44351647_44352145_44352184_44354484_44354584_44356191_44356308_44356384_44356471_44356822_44356915_44357641
ENSMUSG00000041235.13_0	chr4	+	9391	38	FSM	ENSMUSG00000041235.13	ENSMUST00000039267.10	9444	38	28	25	28	-25	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAGAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	8690948	8866785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_8691068_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ENSMUSG00000041235.13_1	chr4	+	10207	38	FSM	ENSMUSG00000041235.13	ENSMUST00000051558.10	10216	38	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	8691365	8867651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_8691435_8751323_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ENSMUSG00000041235.13_9	chr4	+	10140	37	ISM	ENSMUSG00000041235.13	ENSMUST00000051558.10	10216	38	59957	8	-116	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATGTAGTTATAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	8751321	8867651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_8753149_8785341_8785764_8801323_8801466_8805150_8805289_8806295_8806362_8811439_8811496_8822376_8822492_8825461_8825546_8826208_8826347_8826442_8826565_8826883_8827128_8828231_8828409_8832474_8832619_8833739_8833996_8838550_8838762_8839424_8839621_8840388_8840557_8841095_8841276_8844311_8844423_8844506_8844713_8847078_8847279_8847456_8847617_8850795_8850886_8851253_8851358_8852677_8852808_8853173_8853247_8853402_8853461_8854064_8854294_8854524_8854734_8854845_8855515_8856670_8856832_8858478_8858707_8859042_8859487_8862489_8862712_8863908_8864050_8864200_8864306_8865737
ENSMUSG00000041236.9_0	chr13	+	3191	29	FSM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18901459	19050973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_12	chr13	+	2478	28	FSM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGTAGGCCTGCCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	18901485	19050361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_18901507_18907357_18907397_18923611_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_20	chr13	+	2452	27	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	5874	12	5874	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGAAGTAGGCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	18907359	19050358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_18907397_18923611_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_24	chr13	+	3144	28	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	5898	8	5872	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18907357	19050973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_18907397_18923611_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_33	chr13	+	2410	26	ISM	ENSMUSG00000041236.9	ENST00000395969.6	2487	28	22132	11	22132	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAAGTAGGCCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	18923617	19050359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_18923717_18929431_18929510_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041236.9_35	chr13	+	3106	27	ISM	ENSMUSG00000041236.9	ENSMUST00000072961.6	3199	29	22151	8	22125	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCTTTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	18923610	19050973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_18923717_18929431_18929510_18966816_18966892_18975756_18975820_18978496_18978563_18994601_18994722_18995736_18995884_18998396_18998464_19007949_19008048_19011773_19011904_19013392_19013509_19014906_19014964_19022821_19022884_19023817_19023900_19025327_19025421_19026322_19026451_19027638_19027784_19029477_19029520_19030056_19030108_19033055_19033194_19036510_19036566_19037516_19037658_19038694_19038832_19046706_19046807_19046907_19046953_19048202_19048283_19050289
ENSMUSG00000041238.17_0	chr18	+	3506	19	FSM	ENSMUSG00000041238.17	ENSMUST00000115861.9	3523	19	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTCTTTTGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	11766345	11876260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_11766582_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUSG00000041238.17_1	chr18	+	3189	19	FSM	ENSMUSG00000041238.17	ENSMUST00000047322.8	3209	19	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCATACAAATAACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11790497	11875927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_11790750_11793791_11793999_11805638_11805682_11810651_11810748_11826068_11826182_11829799_11829867_11838748_11838925_11848790_11848896_11851889_11851988_11853601_11853715_11854696_11855583_11855660_11855788_11858463_11858553_11860229_11860342_11865246_11865388_11867532_11867603_11871629_11871727_11873982_11874125_11875672
ENSMUSG00000041241.13_0	chr4	+	3717	4	FSM	ENSMUSG00000041241.13	ENSMUST00000044058.11	3733	4	10	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTACTTTTGGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	138161991	138169570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_138162191_138164938_138165027_138165552_138165674_138166261
ENSMUSG00000041258.19_0	chr18	-	9614	30	FSM	ENSMUSG00000041258.19	ENSMUST00000171071.9	9626	30	0	12	0	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAAAACTCCCGTA	NA	NA	NA	NA	NA	NA	NA	NA	82711008	82611729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_82615880_82617071_82617249_82619384_82619515_82622313_82622512_82625872_82626005_82627412_82627601_82635834_82636015_82636867_82637109_82638442_82638589_82639215_82639582_82641084_82641189_82642328_82642612_82646278_82646492_82648095_82648248_82648711_82648816_82651102_82651255_82651811_82651914_82654857_82655115_82657444_82657706_82658224_82658367_82662181_82662386_82664093_82664367_82675073_82675303_82676127_82676332_82686696_82686870_82689810_82689936_82692431_82692611_82698716_82698882_82700269_82700413_82710767
ENSMUSG00000041261.10_0	chr4	-	3836	9	FSM	ENSMUSG00000041261.10	ENSMUST00000066674.8	3853	9	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCAAATCTATGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	8239033	8143370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_8146217_8169595_8169766_8183252_8183366_8184583_8184633_8185575_8185639_8189296_8189393_8221549_8221675_8237918_8238111_8238851
ENSMUSG00000041263.15_0	chr3	-	1421	7	FSM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	5	7	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	88996864	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306_88996413_88996483_88996659_88996791
ENSMUSG00000041263.15_11	chr3	-	3311	10	FSM	ENSMUSG00000041263.15	ENSMUST00000052539.13	3316	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	89000618	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
ENSMUSG00000041263.15_2	chr3	-	1349	6	ISM	ENSMUSG00000041263.15	ENST00000471876.5	1433	7	210	7	210	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	88996659	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306_88996413_88996483
ENSMUSG00000041263.15_3	chr3	-	1915	9	FSM	ENSMUSG00000041263.15	ENSMUST00000166687.6	1922	9	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	88997350	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997277
ENSMUSG00000041263.15_5	chr3	-	3025	10	FSM	ENSMUSG00000041263.15	ENST00000368354.7	3034	10	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	89000650	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88991958_88994079_88994203_88995025_88995258_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88998444_88999869_89000573
ENSMUSG00000041263.15_9	chr3	-	3654	10	ISM	ENSMUSG00000041263.15	ENSMUST00000090929.12	3706	11	752	5	752	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAAAAGATATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	88999845	88991292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_88991958_88994079_88994203_88995025_88995576_88996106_88996154_88996306_88996413_88996483_88996659_88996791_88996869_88996975_88997075_88997802_88998214_88998444
ENSMUSG00000041264.17_0	chr5	+	3784	8	FSM	ENSMUSG00000041264.17	ENSMUST00000121416.8	3792	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTTTGTTGGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	149121167	149152238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_12	chr5	+	3815	10	FSM	ENSMUSG00000041264.17	ENSMUST00000122160.8	3827	10	12	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	149121484	149152240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149122294_149122472_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_13	chr5	+	3137	10	FSM	ENSMUSG00000041264.17	ENSMUST00000100410.10	3148	10	10	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	149121485	149152240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUSG00000041264.17_14	chr5	+	2659	7	FSM	ENSMUSG00000041264.17	ENST00000614860.1	2681	7	16	6	-12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGCTGAGTGCGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	149121513	149152060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149125154_149125284_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041264.17_16	chr5	+	2928	9	FSM	ENSMUSG00000041264.17	ENSMUST00000117878.8	2931	9	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	149121525	149152240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161_149150333_149150832
ENSMUSG00000041264.17_6	chr5	+	3738	9	FSM	ENSMUSG00000041264.17	ENSMUST00000050472.16	3757	9	15	4	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTGGTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	149121384	149152240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149121617_149124517_149124687_149125154_149125284_149130649_149131251_149135454_149135569_149138569_149138700_149141078_149141205_149146452_149146611_149150161
ENSMUSG00000041268.18_8	chr9	-	10168	42	ISM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	20989	6	20989	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTATTTTAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	54387750	54272549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623
ENSMUSG00000041268.18_81	chr9	-	7241	41	FSM	ENSMUSG00000041268.18	ENST00000449909.7	7258	41	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAAAGGTGTAATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	54408732	54273668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303652_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ENSMUSG00000041268.18_9	chr9	-	10263	43	FSM	ENSMUSG00000041268.18	ENST00000543779.6	10278	43	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTTTTATTTTAGTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	54408730	54272549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54273912_54274837_54275056_54276493_54276547_54277155_54277248_54281936_54282015_54282562_54282691_54282789_54282851_54283506_54283646_54285997_54286120_54286200_54286288_54288191_54288310_54289136_54289339_54289919_54290006_54290940_54291072_54294696_54294876_54300911_54301161_54303523_54303655_54305330_54305408_54307225_54307418_54308200_54309271_54311240_54311506_54313031_54313198_54313880_54313979_54316434_54316605_54318883_54318995_54322713_54324388_54327028_54327257_54330513_54330634_54333665_54333790_54335317_54335408_54352666_54352789_54353655_54354350_54358080_54358353_54358885_54359126_54364907_54365083_54366137_54366322_54368222_54368402_54379475_54379543_54380171_54380308_54381120_54381200_54384740_54384813_54387623_54387750_54408634
ENSMUSG00000041278.11_0	chr11	-	1437	8	FSM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43638808	43620835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911_43636275_43638748
ENSMUSG00000041278.11_1	chr11	-	1372	7	ISM	ENSMUSG00000041278.11	ENSMUST00000048578.3	1438	8	2540	0	2540	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGGGGACTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43636269	43620835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_43621435_43627245_43627301_43628693_43628843_43629623_43629661_43630543_43630657_43632587_43632649_43635911
ENSMUSG00000041278.11_3	chr11	-	779	4	FSM	ENSMUSG00000041278.11	ENST00000684018.1	794	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACATCCTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	43630648	43620852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43621435_43627245_43627301_43629623_43629661_43630543
ENSMUSG00000041287.6_0	chr11	+	727	2	FSM	ENSMUSG00000041287.6	ENST00000250055.3	745	2	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGCAGGGACGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	69546169	69547445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69546730_69547278
ENSMUSG00000041293.6_0	chr17	+	2552	11	FSM	ENSMUSG00000041293.6	ENST00000371253.7	2580	11	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCGAATAAAGCCACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	43606021	43634799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43606152_43607556_43607731_43609895_43609997_43611684_43611744_43614525_43614678_43616122_43616287_43618305_43618495_43620877_43622249_43624065_43624108_43625319_43625384_43634693
ENSMUSG00000041293.6_9	chr17	+	1899	6	FSM	ENSMUSG00000041293.6	ENST00000283297.5	1927	6	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCGAATAAAGCCACGAGT	NA	NA	NA	NA	NA	NA	NA	NA	43616159	43634799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_43616287_43618305_43618495_43620877_43622249_43624065_43624108_43625319_43625384_43634693
ENSMUSG00000041297.9_0	chr13	-	5189	14	FSM	ENSMUSG00000041297.9	ENSMUST00000042365.9	5202	14	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAAATAGTGGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	17979228	17891984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_17893497_17893940_17894391_17895672_17895879_17901704_17901837_17902651_17902769_17913501_17913580_17913675_17913778_17924841_17924899_17926255_17926446_17937688_17937860_17939538_17939679_17941020_17941192_17946885_17947543_17978022
ENSMUSG00000041298.16_0	chr5	-	6128	11	FSM	ENSMUSG00000041298.16	ENSMUST00000047257.15	6157	11	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAGGATGCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	148865438	148808403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148813147_148815667_148815795_148825688_148825824_148828438_148828566_148829319_148829479_148830492_148830599_148830958_148831087_148841376_148841540_148855405_148855567_148858046_148858223_148865335
ENSMUSG00000041301.16_0	chr6	+	2249	14	FSM	ENSMUSG00000041301.16	ENST00000648260.1	2260	14	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGTCCCAACTACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	18214106	18299961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_18214315_18220619_18220710_18221468_18221633_18222488_18222615_18225922_18226170_18227925_18228019_18235154_18235347_18273697_18273736_18274525_18274777_18277806_18277887_18280254_18280406_18282425_18282654_18285545_18285647_18299681
ENSMUSG00000041303.8_0	chr1	-	4566	18	FSM	ENSMUSG00000041303.8	ENSMUST00000041638.8	4582	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTGACATTTCACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54478122	54435170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_54437162_54438287_54438441_54442669_54442795_54444138_54444330_54444995_54445234_54455042_54455179_54455880_54455983_54456817_54457021_54458541_54458714_54459554_54459659_54462659_54462733_54463167_54463316_54466558_54466725_54467920_54468113_54469657_54469782_54473212_54473398_54476990_54477103_54477971
ENSMUSG00000041308.7_0	chr8	+	9932	7	FSM	ENSMUSG00000041308.7	ENSMUST00000212524.2	9945	7	12	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATTGTCTCTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107662393	107746345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107662954_107707757_107707972_107718027_107718239_107723697_107723841_107728141_107728339_107736412_107736598_107737923
ENSMUSG00000041313.15_0	chr5	-	7173	13	FSM	ENSMUSG00000041313.15	ENSMUST00000048116.15	7179	13	2	4	2	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCACTGTGTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	148336712	148264223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148269354_148270699_148270809_148271301_148271469_148272186_148272405_148273916_148274020_148277345_148277486_148278742_148278966_148279547_148279667_148282612_148282770_148284962_148285122_148288875_148289260_148301971_148302062_148336538
ENSMUSG00000041319.15_0	chr17	-	1475	13	FSM	ENSMUSG00000041319.15	ENSMUST00000047436.11	1504	13	29	0	29	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	23892787	23887591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487
ENSMUSG00000041319.15_4	chr17	-	1450	14	FSM	ENSMUSG00000041319.15	ENSMUST00000095579.11	1450	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGCATTTTATTCCC	NA	NA	NA	NA	NA	NA	NA	NA	23892856	23887591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892807
ENSMUSG00000041319.15_5	chr17	-	1424	14	FSM	ENSMUSG00000041319.15	ENSMUST00000115490.9	1431	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTCTTGTTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	23892845	23887599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23887861_23887949_23888085_23888169_23888281_23888364_23888428_23888500_23888551_23888820_23888924_23889009_23889082_23889166_23889216_23889296_23889335_23889422_23889527_23889614_23889680_23889765_23889882_23892487_23892714_23892814
ENSMUSG00000041324.15_0	chr13	+	6368	5	FSM	ENSMUSG00000041324.15	ENSMUST00000042603.14	6390	5	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTGTTCTTTGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	16186451	16206200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_16186676_16186784_16186972_16189035_16189118_16191766_16192269_16200827
ENSMUSG00000041328.17_0	chr7	-	5974	16	FSM	ENSMUSG00000041328.17	ENSMUST00000119954.9	5995	16	20	1	-11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGAAGGCTTTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	92319122	92292751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92293986_92295197_92295234_92295637_92295731_92296135_92296292_92297149_92297334_92298133_92298240_92298663_92298784_92302357_92302458_92306515_92308075_92309005_92309097_92309207_92309389_92310166_92311285_92312669_92312865_92313174_92313364_92314947_92315074_92318636
ENSMUSG00000041341.11_0	chr12	-	7525	42	FSM	ENSMUSG00000041341.11	ENSMUST00000041055.9	7546	42	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAGATTGTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	105651457	105582402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630902_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ENSMUSG00000041341.11_1	chr12	-	7542	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAGATTGTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	105651470	105582402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630898_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ENSMUSG00000041341.11_5	chr12	-	7537	42	NNC	ENSMUSG00000041341.11	novel	7546	42	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTAAGATTGTTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	105651470	105582402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_105583563_105587465_105587616_105588361_105588517_105588965_105589088_105589679_105589763_105590173_105590244_105592436_105592642_105592986_105593066_105601178_105601281_105601943_105602139_105602705_105602812_105604169_105604397_105605460_105605664_105607410_105607553_105609448_105609620_105610051_105610129_105610551_105610623_105611090_105611184_105611630_105611738_105612782_105612864_105613011_105613212_105614571_105614723_105615247_105615421_105615733_105615892_105617639_105617783_105618317_105618514_105618787_105618891_105620267_105620542_105624225_105624415_105624526_105624620_105625096_105625248_105627258_105627521_105628873_105628977_105629065_105629221_105630182_105630369_105630903_105631000_105632855_105633036_105635522_105635686_105636933_105637037_105637734_105637888_105641109_105641273_105650927
ENSMUSG00000041343.20_1	chr7	-	1882	12	FSM	ENSMUSG00000041343.20	ENST00000260047.10	1900	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2600	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAGTGCAGTAAGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	92285731	92233668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92233754_92239322_92239468_92241038_92241166_92254415_92254589_92259752_92259859_92261950_92262077_92263559_92263761_92268755_92268892_92273178_92273296_92274978_92275087_92280706_92280871_92285337
ENSMUSG00000041346.12_1	chr11	-	1882	10	FSM	ENSMUSG00000041346.12	ENSMUST00000048139.12	1891	10	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGGAGTCATTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69470144	69452587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495
ENSMUSG00000041346.12_4	chr11	-	1741	11	FSM	ENSMUSG00000041346.12	ENST00000431639.6	1761	11	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAATATAAAGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69472420	69452610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495_69469880_69472273
ENSMUSG00000041346.12_5	chr11	-	1699	11	FSM	ENSMUSG00000041346.12	ENST00000457584.6	1717	11	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAATATAAAGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	69471222	69452610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69452846_69452947_69453086_69453219_69453324_69453474_69453684_69454129_69454263_69454372_69454464_69454684_69454774_69468451_69468564_69469272_69469372_69469495_69469880_69471117
ENSMUSG00000041347.6_0	chr12	+	1325	1	FSM	ENSMUSG00000041347.6	ENSMUST00000041229.5	1338	1	3	10	3	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGATCCGGAGATTAG	NA	NA	NA	NA	NA	NA	NA	NA	105570352	105571677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105570400_105571700
ENSMUSG00000041351.17_1	chr4	+	3502	24	FSM	ENSMUSG00000041351.17	ENST00000290101.8	3515	24	9	4	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	4431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGTTAAGAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	137392039	137457171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137392160_137431366_137431479_137437197_137437234_137437925_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451304_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_31	chr4	+	3040	21	FSM	ENSMUSG00000041351.17	ENST00000542643.6	3045	21	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTACCCGGAGTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137437921	137457166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137451056_137451135_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455594_137455711_137456185
ENSMUSG00000041351.17_40	chr4	+	2986	20	FSM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTACCCGGAGTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137437921	137457166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137437974_137438958_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041351.17_62	chr4	+	2936	19	ISM	ENSMUSG00000041351.17	ENST00000374765.9	2992	20	1035	6	1035	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTACCCGGAGTTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	137438956	137457166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_137438998_137439325_137439512_137443052_137443157_137443395_137443475_137443830_137443885_137444708_137444793_137445004_137445106_137445225_137445356_137446185_137446342_137446638_137446711_137447220_137447308_137447604_137447743_137449136_137449269_137452002_137452113_137452860_137452975_137454262_137454387_137454987_137455091_137455570_137455711_137456185
ENSMUSG00000041353.13_0	chrX	-	1237	3	FSM	ENSMUSG00000041353.13	ENSMUST00000163233.2	1256	3	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAAACAATATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	149223887	149191584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149192597_149203337_149203438_149223762
ENSMUSG00000041354.17_0	chr17	+	3237	18	FSM	ENSMUSG00000041354.17	ENSMUST00000047503.16	3252	18	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCTGAACCCTGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	34148560	34156651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34149019_34149218_34149416_34150699_34150784_34151013_34151193_34151294_34151346_34151427_34151726_34151982_34152235_34152324_34152429_34152514_34152600_34152685_34152755_34152870_34152946_34153948_34153982_34154107_34154230_34154333_34154430_34154518_34154631_34154713_34155008_34155836_34155952_34156038
ENSMUSG00000041355.14_0	chr3	+	1048	6	FSM	ENSMUSG00000041355.14	ENSMUST00000195014.6	1059	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88486919	88495720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88486994_88487186_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000041355.14_6	chr3	+	975	5	FSM	ENSMUSG00000041355.14	ENSMUST00000035785.9	1189	5	208	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCGATGTGTTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	88487185	88495720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88487342_88488280_88488380_88491083_88491193_88494171_88494250_88495187
ENSMUSG00000041358.2_0	chr2	-	3910	8	FSM	ENSMUSG00000041358.2	ENST00000614490.4	3926	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGCCACCCTGCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	112092075	112078527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112080525_112080903_112081021_112081389_112081668_112082080_112082221_112083846_112083976_112086004_112086714_112089510_112089689_112091713
ENSMUSG00000041360.9_0	chr19	-	3463	18	FSM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTTTCTATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27407225	27366105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436_27404529_27407191
ENSMUSG00000041360.9_1	chr19	-	3420	17	ISM	ENSMUSG00000041360.9	ENSMUST00000076219.6	3471	18	2706	8	2706	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTTTCTATTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	27404519	27366105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_27367714_27371637_27371729_27373694_27373783_27376281_27376505_27377078_27377222_27389581_27389663_27393285_27393340_27394134_27394234_27396194_27396274_27397417_27397522_27398696_27398872_27399754_27399822_27400053_27400148_27400905_27400982_27401608_27401745_27403195_27403415_27404436
ENSMUSG00000041361.14_0	chr9	-	2279	13	FSM	ENSMUSG00000041361.14	ENSMUST00000093823.8	2283	13	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTAGTGTCTCTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	71499638	71411628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_71412512_71422350_71422452_71432063_71432148_71453950_71454057_71456005_71456086_71457460_71457590_71459520_71459647_71462866_71463020_71466129_71466244_71468236_71468330_71471691_71471848_71486892_71486980_71499471
ENSMUSG00000041362.18_0	chr19	-	3760	15	FSM	ENSMUSG00000041362.18	ENSMUST00000163821.3	3769	15	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAAGGGTCCGCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	59064494	58961789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58963641_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59063886
ENSMUSG00000041362.18_3	chr19	-	1905	17	FSM	ENSMUSG00000041362.18	ENST00000392901.10	1914	17	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTCGTTCAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	59086600	58977264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_58977483_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062_59049116_59086528
ENSMUSG00000041362.18_4	chr19	-	1832	16	ISM	ENSMUSG00000041362.18	ENST00000392901.10	1914	17	37489	6	15387	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGTTCGTTCAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	59049114	58977264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_58977483_58978620_58978814_58983449_58983571_58988324_58988379_58992271_58992382_58998196_58998280_59003958_59004059_59007236_59007391_59010607_59010755_59016586_59016682_59020604_59020687_59023475_59023574_59026653_59026823_59030293_59030389_59039265_59039327_59049062
ENSMUSG00000041375.19_0	chr7	-	2351	11	FSM	ENSMUSG00000041375.19	ENSMUST00000041010.15	2379	11	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCACCCCACTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	16018963	16009395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16010033_16010126_16010221_16010418_16010555_16010651_16010699_16012281_16012464_16014522_16014697_16014782_16014867_16016281_16016531_16016676_16016776_16018195_16018301_16018419
ENSMUSG00000041380.14_0	chrX	+	4723	6	FSM	ENSMUSG00000041380.14	ENST00000276198.6	4747	6	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTATTAAACGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	145745520	145980254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_145746071_145764543_145764606_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041380.14_1	chrX	+	4629	6	FSM	ENSMUSG00000041380.14	ENST00000371950.3	4652	6	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTATTAAACGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	145745519	145980254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_145746071_145764543_145764606_145855380_145855484_145858726_145859044_145952565_145952672_145976764
ENSMUSG00000041380.14_2	chrX	+	3255	6	FSM	ENSMUSG00000041380.14	ENST00000371951.5	3283	6	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATGTGAAAAAAGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	145745523	145978696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_145746071_145764543_145764699_145855380_145855484_145858726_145859044_145952565_145952767_145976764
ENSMUSG00000041390.19_0	chr6	+	3413	5	FSM	ENSMUSG00000041390.19	ENSMUST00000101663.10	3431	5	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACTGACTGTGCTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	15720672	15802159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_15720963_15721185_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUSG00000041390.19_3	chr6	+	1860	4	FSM	ENSMUSG00000041390.19	ENSMUST00000120512.8	1871	4	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCAAAAAATGTAGAACACT	NA	NA	NA	NA	NA	NA	NA	NA	15721093	15800804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_15721364_15740986_15741110_15770212_15770492_15799616
ENSMUSG00000041396.14_0	chr1	+	1488	2	FSM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCCCAGAATTTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	163822471	163824801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163822641_163823482
ENSMUSG00000041396.14_1	chr1	+	1399	2	FSM	ENSMUSG00000041396.14	ENSMUST00000111490.2	1419	2	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCCCAGAATTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	163822465	163824800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_163822547_163823482
ENSMUSG00000041396.14_4	chr1	+	1318	1	ISM	ENSMUSG00000041396.14	ENSMUST00000045694.14	1513	2	1025	12	1025	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCCCAGAATTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	163823482	163824800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_163823500_163824800
ENSMUSG00000041406.15_0	chr1	-	3191	25	FSM	ENSMUSG00000041406.15	ENSMUST00000097493.10	3217	25	26	0	26	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCGTTCTCTACATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	163822339	163773561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163773995_163781717_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ENSMUSG00000041406.15_8	chr1	-	3154	24	FSM	ENSMUSG00000041406.15	ENSMUST00000045876.8	3179	24	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATGGCACAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	163822355	163781337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_163781909_163782905_163783026_163784396_163784478_163785061_163785167_163786856_163786971_163788145_163788242_163789532_163789656_163792038_163792225_163792303_163792394_163793976_163794029_163794642_163794726_163795722_163795910_163799415_163799531_163799775_163799922_163804312_163804378_163805648_163805730_163810233_163810373_163811892_163811978_163813573_163813737_163814455_163814597_163815174_163815280_163817273_163817363_163818288_163818329_163822178
ENSMUSG00000041408.19_0	chr14	+	6338	19	FSM	ENSMUSG00000041408.19	ENSMUST00000048263.14	6351	19	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACACACGTTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	34395890	34469933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581
ENSMUSG00000041408.19_10	chr14	+	4029	20	FSM	ENSMUSG00000041408.19	ENSMUST00000169910.8	4066	20	25	12	25	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACACTTACTTGGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	34396103	34467897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461396_34463013_34463103_34466765_34466862_34467581_34467707_34467766
ENSMUSG00000041408.19_4	chr14	+	6332	19	NNC	ENSMUSG00000041408.19	novel	6351	19	NA	NA	6	-12	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAAATACACACGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	34395890	34469928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_34396318_34398910_34399432_34413638_34414692_34416943_34417063_34444220_34444317_34446662_34446816_34447084_34447222_34447856_34447969_34451136_34451365_34452505_34452618_34453465_34453567_34455687_34455765_34458626_34458803_34459227_34459344_34459812_34459978_34461187_34461395_34463013_34463103_34466765_34466862_34467581
ENSMUSG00000041415.11_0	chr12	-	5483	25	FSM	ENSMUSG00000041415.11	ENST00000532939.3	5501	25	11	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGCTCCAGGGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	104718202	104662530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_104663404_104666623_104666780_104668660_104669442_104670324_104670501_104670977_104671084_104671311_104671495_104672471_104672626_104672809_104673024_104673111_104673292_104675034_104675175_104676043_104676120_104676883_104677017_104678439_104678595_104679253_104679497_104681032_104681166_104688229_104688703_104690160_104690330_104694591_104694753_104695386_104695522_104696391_104696523_104697278_104697442_104698058_104698247_104704027_104704126_104705041_104705108_104718006
ENSMUSG00000041417.16_0	chr13	-	7086	16	FSM	ENSMUSG00000041417.16	ENSMUST00000055518.13	7113	16	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTTCAAGGCATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	101904708	101817080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101837954_101838035_101838218_101838421_101839216_101839349_101845427_101845503_101846157_101846251_101893833_101894548_101904484
ENSMUSG00000041417.16_4	chr13	-	2913	10	FSM	ENSMUSG00000041417.16	ENSMUST00000035532.13	2923	10	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGACAAAGTATTGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	101829135	101820178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_101821578_101822715_101822887_101823480_101823550_101823638_101823816_101824008_101824152_101825140_101825267_101825486_101825668_101825906_101826006_101826988_101827092_101828690
ENSMUSG00000041420.19_0	chr7	+	1825	13	FSM	ENSMUSG00000041420.19	ENSMUST00000176506.8	1839	13	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCAAATCAAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	15909203	15920419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912926_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919447_15919981
ENSMUSG00000041420.19_3	chr7	+	1713	13	FSM	ENSMUSG00000041420.19	ENSMUST00000002495.18	1731	13	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCAAATCAAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	15909362	15920419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_15909493_15911316_15911499_15911633_15911794_15911885_15911937_15912669_15912721_15912875_15913026_15915965_15916078_15916244_15916394_15917715_15917793_15917962_15918022_15918559_15918644_15919372_15919443_15919981
ENSMUSG00000041426.13_0	chr1	+	1814	14	FSM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	6	10	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTTGTAAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	52884210	52960135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52884304_52892826_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ENSMUSG00000041426.13_7	chr1	+	1723	13	ISM	ENSMUSG00000041426.13	ENSMUST00000044478.7	1830	14	8620	10	8620	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGGTTGTAAAAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	52892824	52960135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_52892870_52899186_52899325_52901426_52901512_52904707_52904789_52908064_52908118_52924261_52924341_52940346_52940493_52942005_52942093_52943800_52943860_52944529_52944612_52952889_52953010_52955795_52955830_52959421
ENSMUSG00000041429.4_0	chr17	+	1061	6	FSM	ENSMUSG00000041429.4	ENSMUST00000047611.4	1079	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGATTTCTTGGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	24851666	24857804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24851829_24852900_24853140_24853698_24853870_24854561_24854722_24857397_24857504_24857581
ENSMUSG00000041431.17_0	chr13	-	2471	9	FSM	ENSMUSG00000041431.17	ENSMUST00000072119.15	2489	9	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCAGCCAAGGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100923067	100915164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100919972_100920156_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041431.17_12	chr13	-	2121	8	FSM	ENSMUSG00000041431.17	ENSMUST00000091295.14	2140	8	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTCATTTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100922981	100915245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100916294_100916529_100916641_100917283_100917425_100917665_100917903_100918132_100918292_100921964_100922127_100922240_100922412_100922889
ENSMUSG00000041438.9_0	chr8	+	2230	17	FSM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	1	1	1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	107620283	107649719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107620345_107621222_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUSG00000041438.9_10	chr8	+	2164	16	ISM	ENSMUSG00000041438.9	ENSMUST00000047629.7	2232	17	945	1	945	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGACATTTTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	107621227	107649719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_107621384_107624691_107624884_107625073_107625159_107627477_107627568_107630864_107631077_107632756_107632929_107633021_107633114_107634836_107634934_107637573_107637639_107638857_107638981_107639979_107640137_107642787_107642895_107644213_107644310_107645251_107645438_107648803_107648915_107649496
ENSMUSG00000041440.19_0	chr9	+	2792	16	FSM	ENSMUSG00000041440.19	ENSMUST00000085217.12	2815	16	23	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGCCTACTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	96001437	96062243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96001666_96011053_96011148_96015441_96015518_96019797_96019892_96022591_96022724_96027724_96027801_96032268_96032331_96032487_96032562_96032788_96032850_96035133_96035261_96037445_96037551_96053512_96053608_96056742_96056847_96058282_96058343_96059471_96059606_96060973
ENSMUSG00000041453.13_0	chr5	+	1838	6	FSM	ENSMUSG00000041453.13	ENSMUST00000035983.12	1856	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTCAACTGTTTTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	146769709	146773834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146769982_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_5	chr5	+	882	6	FSM	ENSMUSG00000041453.13	ENSMUST00000075453.9	899	6	11	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGACTGTGAAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	146770015	146772789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146770377_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041453.13_6	chr5	+	1049	6	FSM	ENSMUSG00000041453.13	ENSMUST00000099272.3	1067	6	8	10	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACCAGGACTGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	146770019	146772786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_146770551_146770993_146771073_146771257_146771320_146771801_146771915_146772373_146772525_146772673
ENSMUSG00000041459.16_0	chr4	-	6480	7	FSM	ENSMUSG00000041459.16	ENSMUST00000165113.8	6495	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	148711444	148696844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148702163_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_15	chr4	-	1892	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105699.8	1904	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTTGTCTCAAGTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	148711210	148701189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148702163_148703130_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_17	chr4	-	784	5	FSM	ENSMUSG00000041459.16	ENST00000456601.1	803	5	14	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGGGTGTTCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	148709809	148702025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148702093_148703094_148703249_148703640_148703812_148706405_148706570_148709581
ENSMUSG00000041459.16_4	chr4	-	6493	7	FSM	ENSMUSG00000041459.16	ENSMUST00000172073.8	6513	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	148711439	148696844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148702163_148703103_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_5	chr4	-	6398	7	FSM	ENSMUSG00000041459.16	ENSMUST00000105702.9	6425	7	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGTTTGTAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	148711434	148696846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148702093_148703121_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041459.16_6	chr4	-	7456	6	FSM	ENSMUSG00000041459.16	ENSMUST00000084125.10	7477	6	15	6	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTGTTTGTAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	148711461	148696844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148703249_148703640_148703812_148705048_148705190_148706405_148706570_148709581_148709834_148711137
ENSMUSG00000041471.10_0	chr14	-	3293	11	FSM	ENSMUSG00000041471.10	ENSMUST00000111917.3	3317	11	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATTCTGTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	34032307	33958997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_33959544_33960794_33960911_33963243_33963473_33967118_33967326_33970840_33970976_33971133_33971329_33981581_33981690_33989457_33990910_33991427_33991494_34030996_34031052_34032123
ENSMUSG00000041471.10_1	chr14	-	2168	6	FSM	ENSMUSG00000041471.10	ENST00000554755.1	2188	6	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAATAGGTAAAACAGC	NA	NA	NA	NA	NA	NA	NA	NA	33990852	33960804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_33960911_33963243_33963473_33970840_33970976_33971133_33971329_33981581_33981690_33989457
ENSMUSG00000041476.13_0	chrX	+	1073	6	FSM	ENSMUSG00000041476.13	ENSMUST00000190091.7	1087	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAACATATGAATCTT	NA	NA	NA	NA	NA	NA	NA	NA	156481976	156535579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_156482310_156485951_156486009_156497582_156497670_156503926_156504076_156534590_156534626_156535167
ENSMUSG00000041476.13_2	chrX	+	824	5	FSM	ENSMUSG00000041476.13	ENST00000379494.4	845	5	10	11	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATGTAACATATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	156482171	156535576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_156482310_156485951_156486009_156497582_156497670_156503926_156504080_156535187
ENSMUSG00000041477.15_0	chr6	+	1787	9	FSM	ENSMUSG00000041477.15	ENST00000280665.11	1809	9	14	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCATGAGAACCACGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	119152253	119197022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194694_119194941_119196963
ENSMUSG00000041477.15_1	chr6	+	1736	9	FSM	ENSMUSG00000041477.15	ENSMUST00000073909.6	1748	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGAGTAAAATGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	119152254	119197140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_119152404_119157025_119157067_119160610_119160739_119175888_119175956_119177782_119177913_119183430_119183560_119191730_119192568_119194862_119194941_119196963
ENSMUSG00000041482.18_1	chr18	-	10708	54	FSM	ENSMUSG00000041482.18	ENSMUST00000047480.13	10724	54	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCATCCAAGAGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	63520245	63143290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153687_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63178447_63178616_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241345_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866_63280078_63290265_63290429_63315906_63315950_63378641_63378768_63459637_63459734_63519276
ENSMUSG00000041482.18_6	chr18	-	8318	54	FSM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	1	16	1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAACAAACTGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	63519339	63144634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153689_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866_63280078_63290265_63290429_63315906_63315950_63378641_63378768_63459637_63459734_63519276
ENSMUSG00000041482.18_8	chr18	-	8250	53	ISM	ENSMUSG00000041482.18	ENST00000580640.5	8335	54	59612	16	59612	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAACAAACTGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	63459728	63144634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_63144872_63145700_63145885_63148810_63148891_63150595_63150725_63152261_63152435_63153689_63153781_63154214_63154404_63155468_63155617_63157482_63157642_63160587_63160803_63160906_63161055_63162125_63162259_63163345_63163599_63165911_63166095_63174617_63174877_63175503_63175912_63183602_63183770_63186034_63186202_63190175_63190236_63192721_63192837_63197743_63197851_63201974_63202047_63203026_63203149_63205917_63206008_63207651_63207812_63208771_63208869_63211682_63211927_63214734_63214901_63215928_63216031_63216144_63216350_63217749_63217951_63219234_63219361_63219648_63219826_63223950_63224112_63225873_63226089_63226454_63226488_63232123_63232166_63235091_63235266_63239248_63239398_63241045_63241342_63242935_63243060_63246948_63247180_63247971_63248121_63250719_63250859_63251976_63252016_63254293_63254414_63257636_63257800_63277985_63278200_63279866_63280078_63290265_63290429_63315906_63315950_63378641_63378768_63459637
ENSMUSG00000041483.15_0	chr1	+	4913	2	FSM	ENSMUSG00000041483.15	ENSMUST00000047734.15	4933	2	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	136552645	136557778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136552790_136553009
ENSMUSG00000041483.15_1	chr1	+	4918	2	FSM	ENSMUSG00000041483.15	ENSMUST00000112046.2	4937	2	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTGAAGAAAGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	136552644	136557778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136552790_136553005
ENSMUSG00000041483.15_2	chr1	+	2909	3	FSM	ENSMUSG00000041483.15	ENST00000367352.3	2921	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTTTTAAATGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	136552742	136555975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136552790_136553005_136553166_136553273
ENSMUSG00000041483.15_3	chr1	+	2850	2	ISM	ENSMUSG00000041483.15	ENST00000367352.3	2921	3	275	12	275	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGTTTTAAATGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	136553017	136555975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_136553166_136553273
ENSMUSG00000041488.17_0	chr19	-	2418	11	FSM	ENSMUSG00000041488.17	ENSMUST00000075304.14	2430	11	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACTAGTTGTTGGGTA	NA	NA	NA	NA	NA	NA	NA	NA	11796172	11752490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_11753953_11754451_11754535_11760163_11760275_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041488.17_2	chr19	-	2781	11	FSM	ENSMUSG00000041488.17	ENSMUST00000069285.6	2810	11	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAAAACAGCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	11796288	11754859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_11756538_11758930_11759045_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041488.17_3	chr19	-	1476	10	FSM	ENSMUSG00000041488.17	ENST00000529177.5	1491	10	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACTCTTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	11796201	11755963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_11756538_11760389_11760501_11762753_11762889_11763048_11763123_11763888_11763998_11765532_11765601_11766920_11766996_11769109_11769210_11780857_11780942_11796055
ENSMUSG00000041491.9_0	chr19	-	2539	15	FSM	ENSMUSG00000041491.9	ENSMUST00000047704.8	2548	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATATTGAGTGATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	15962344	15933137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_15933768_15936895_15937065_15938306_15938474_15939735_15939814_15946435_15946565_15947896_15947943_15948259_15948396_15951719_15951832_15952251_15952317_15953612_15953727_15956144_15956320_15958455_15958560_15958828_15958902_15958991_15959165_15961976
ENSMUSG00000041506.16_0	chr9	+	1576	15	FSM	ENSMUSG00000041506.16	ENSMUST00000047721.10	1586	15	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTTGTTCCTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	106354477	106362623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106354634_106354869_106354953_106357894_106358005_106358354_106358423_106358511_106358554_106358958_106359086_106360110_106360236_106360317_106360411_106360755_106360857_106360945_106361081_106361164_106361228_106361409_106361556_106361638_106361719_106362275_106362350_106362450
ENSMUSG00000041528.16_17	chr9	-	2434	23	ISM	ENSMUSG00000041528.16	ENST00000432042.5	2511	24	8095	5	8060	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGATCTGGGGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107948440	107936850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349
ENSMUSG00000041528.16_19	chr9	-	2503	24	FSM	ENSMUSG00000041528.16	ENST00000432042.5	2511	24	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACGATCTGGGGAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	107956532	107936850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941119_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107956467
ENSMUSG00000041528.16_4	chr9	-	4711	39	FSM	ENSMUSG00000041528.16	ENSMUST00000162355.8	4727	39	6	10	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAACAGCCCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	107956494	107928880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107929160_107929233_107929320_107929412_107929508_107929643_107929787_107933235_107933321_107933555_107933632_107933719_107933909_107934014_107934155_107935361_107935447_107935534_107935623_107935707_107935796_107935981_107936057_107936861_107937040_107938952_107939061_107939760_107939845_107940069_107940216_107940681_107940881_107941101_107941227_107942884_107942987_107943483_107943605_107943821_107943894_107944053_107944116_107944293_107944394_107944594_107944713_107945320_107945395_107945465_107945559_107945674_107945801_107946189_107946295_107946370_107946486_107946874_107947001_107947146_107947215_107947415_107947503_107947743_107947830_107947924_107947980_107948349_107948445_107948576_107948657_107954547_107954633_107954920_107955097_107955998
ENSMUSG00000041530.18_0	chr4	-	7224	19	FSM	ENSMUSG00000041530.18	ENSMUST00000097888.10	7227	19	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCAGTCTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126362376	126328807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126333405_126333634_126333835_126334156_126334259_126334969_126335105_126335681_126335877_126336608_126336700_126336873_126337034_126342559_126342745_126347350_126347485_126347618_126347742_126348097_126348218_126352901_126353050_126353572_126353661_126353793_126353929_126354159_126354297_126354698_126354881_126355477_126355599_126357464_126357649_126362189
ENSMUSG00000041540.17_0	chr6	-	2682	15	FSM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTGTTTGGGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	144155135	143778535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100822_144100950_144155056
ENSMUSG00000041540.17_1	chr6	-	2603	14	ISM	ENSMUSG00000041540.17	ENST00000537393.5	2687	15	54191	0	54191	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCTGTTTGGGGGCGGG	NA	NA	NA	NA	NA	NA	NA	NA	144100949	143778535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100822
ENSMUSG00000041540.17_21	chr6	-	2535	15	FSM	ENSMUSG00000041540.17	ENST00000545921.5	2555	15	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGCTCGGAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	144156519	143778829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_143779294_143780921_143781139_143786899_143787074_143790461_143790571_143807109_143807256_143819698_143819877_143853112_143853260_143887076_143887163_143906522_143906644_143968894_143968964_143974005_143974179_143986994_143987082_144062169_144062381_144100717_144100950_144156398
ENSMUSG00000041548.5_0	chr5	-	1801	3	FSM	ENSMUSG00000041548.5	ENSMUST00000036991.5	1816	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTTGTGCTTCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	116560912	116546553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116547550_116553465_116553530_116560171
ENSMUSG00000041556.9_0	chr4	+	1273	6	FSM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATGGACGCACAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	148245083	148250872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148245169_148248531_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUSG00000041556.9_1	chr4	+	1188	5	ISM	ENSMUSG00000041556.9	ENSMUST00000047951.9	1288	6	3453	10	3453	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAATGGACGCACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	148248530	148250871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_148248913_148249282_148249413_148249484_148249581_148250100_148250231_148250421
ENSMUSG00000041559.8_0	chr1	+	3115	3	FSM	ENSMUSG00000041559.8	ENSMUST00000048183.8	3120	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTAGCAAGTGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	133964991	133976010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_133965321_133967953_133968941_133974211
ENSMUSG00000041560.13_0	chr7	-	3152	13	FSM	ENSMUSG00000041560.13	ENSMUST00000044158.13	3176	13	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	3433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	15679988	15670120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15671815_15672098_15672156_15672276_15672354_15672835_15672903_15673013_15673190_15673378_15673580_15673653_15673759_15674062_15674159_15675664_15675736_15676099_15676300_15676713_15676823_15679214_15679280_15679754
ENSMUSG00000041565.18_0	chr17	+	1644	14	FSM	ENSMUSG00000041565.18	ENST00000400105.6	1665	14	9	12	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATAAATGTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	68762694	69084947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_68762793_68764192_68764329_68766754_68766847_68768445_68768601_68769938_68770016_68791707_68791794_68793867_68793979_68866743_68866859_68894091_68894195_68937179_68937354_68948493_68948565_69071505_69071716_69081254_69081318_69084794
ENSMUSG00000041567.4_0	chr12	-	3672	5	FSM	ENSMUSG00000041567.4	ENSMUST00000043915.4	3690	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGCAATTTTTTTCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	104010690	103995033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103997467_103998683_103998832_104001809_104002081_104003996_104004648_104010521
ENSMUSG00000041570.15_0	chr1	-	6312	17	FSM	ENSMUSG00000041570.15	ENSMUST00000192001.6	6329	17	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTACCTTTCAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	136273427	136196905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_136198886_136199268_136199388_136201487_136201604_136202538_136202612_136204275_136204497_136204931_136205069_136208043_136210238_136210549_136210620_136211604_136211640_136213646_136213741_136215637_136215732_136220617_136220758_136221017_136221160_136225479_136225564_136232032_136232195_136252474_136252735_136273036
ENSMUSG00000041571.11_0	chr7	-	719	6	FSM	ENSMUSG00000041571.11	ENSMUST00000044355.11	736	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4875	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCAAGGGAGATGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	15656317	15651139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15651465_15653772_15653872_15653967_15654043_15654229_15654284_15654373_15654399_15656176
ENSMUSG00000041577.6_0	chr1	-	3597	3	FSM	ENSMUSG00000041577.6	ENSMUST00000048432.6	3615	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAAAGCTGACTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	133849142	133838049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133840520_133842182_133843160_133848992
ENSMUSG00000041592.17_0	chr11	-	8132	45	FSM	ENSMUSG00000041592.17	ENST00000392650.8	8141	45	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCTGAAGCGGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	113793960	113667210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113668871_113669929_113669947_113671446_113671970_113682200_113682328_113684125_113684262_113684548_113684690_113685748_113685914_113690968_113691095_113693950_113694113_113697092_113697231_113701154_113701342_113712173_113712290_113712401_113712504_113714196_113714254_113715840_113715977_113717267_113717339_113717852_113717957_113719183_113719386_113720723_113720919_113721605_113721705_113723079_113723270_113723948_113724065_113725643_113725882_113729209_113729361_113729442_113729553_113730128_113730251_113732860_113733053_113733494_113733594_113733749_113733946_113741721_113741838_113742527_113742710_113745095_113745237_113747451_113747600_113748521_113748659_113750639_113750817_113757817_113757921_113758730_113758899_113759675_113759793_113760551_113760747_113763656_113763741_113763856_113764048_113765400_113765513_113776075_113776210_113784246_113784395_113793859
ENSMUSG00000041594.19_0	chr14	-	3393	18	FSM	ENSMUSG00000041594.19	ENSMUST00000037726.14	3416	18	16	7	16	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAAACTGTCTTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	123220679	123156389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188005_123200709_123200798_123209151_123209369_123210581_123210698_123215485_123215699_123220583
ENSMUSG00000041594.19_6	chr14	-	2028	15	FSM	ENSMUSG00000041594.19	ENST00000328767.9	2047	15	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTCTATTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	123215693	123157317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_123157556_123158644_123158715_123163375_123163489_123164963_123165079_123170231_123170374_123170508_123170617_123170739_123170820_123178716_123178849_123179226_123179399_123180566_123180770_123182085_123182251_123182919_123183013_123187900_123188002_123200709_123200798_123215485
ENSMUSG00000041598.8_0	chr11	-	3392	2	FSM	ENSMUSG00000041598.8	ENSMUST00000106616.2	3405	2	7	6	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	113642137	113617681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113620492_113641555
ENSMUSG00000041598.8_1	chr11	-	2987	2	FSM	ENSMUSG00000041598.8	ENSMUST00000053536.5	3008	2	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTTCTAGTGTCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	113642690	113617681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113620492_113642513
ENSMUSG00000041598.8_2	chr11	-	565	3	FSM	ENSMUSG00000041598.8	ENST00000581014.1	579	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTACTCTGTAGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	113642616	113619247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113619491_113620272_113620492_113642513
ENSMUSG00000041605.17_0	chr1	-	2968	10	FSM	ENSMUSG00000041605.17	ENSMUST00000120339.8	2988	10	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGAGGATGAAGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	136161988	136141274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_136142157_136143493_136144179_136147460_136147635_136147868_136148080_136148809_136148864_136153073_136153297_136153889_136154007_136154517_136154643_136155251_136155401_136161640
ENSMUSG00000041607.18_1	chr18	+	353	3	FSM	ENSMUSG00000041607.18	ENST00000528160.1	369	3	10	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCACCCCGACTGGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	82572660	82602429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_82572794_82597156_82597184_82602236
ENSMUSG00000041609.17_0	chr5	-	1863	3	FSM	ENSMUSG00000041609.17	ENSMUST00000118576.8	1874	3	4	7	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACAGACCTTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	115791041	115786242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115787629_115789877_115789999_115790685
ENSMUSG00000041609.17_1	chr5	-	1558	3	FSM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTACAGACCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	115791037	115786245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115787629_115789877_115789999_115790983
ENSMUSG00000041609.17_2	chr5	-	1494	2	ISM	ENSMUSG00000041609.17	ENSMUST00000121746.8	1568	3	1052	7	1052	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTACAGACCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	115789988	115786245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_115787629_115789877
ENSMUSG00000041617.11_0	chr16	+	1272	8	FSM	ENSMUSG00000041617.11	ENSMUST00000056962.11	1273	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTAAGCTTCCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	17464338	17468601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17464648_17465471_17465517_17465930_17465991_17466658_17466825_17467593_17467778_17467858_17467939_17468012_17468070_17468230
ENSMUSG00000041623.18_0	chr11	+	2177	5	FSM	ENSMUSG00000041623.18	ENSMUST00000042227.15	2196	5	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACACTTTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113575248	113585465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_113575637_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041623.18_6	chr11	+	2040	5	FSM	ENSMUSG00000041623.18	ENSMUST00000106621.4	2062	5	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACACTTTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113575286	113585465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_113575538_113578599_113580048_113582554_113582660_113583220_113583329_113585337
ENSMUSG00000041624.11_0	chr9	+	2371	8	FSM	ENSMUSG00000041624.11	ENST00000347596.2	2394	8	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCCTTGAAATGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	3532811	3894842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_3533100_3579517_3579580_3582578_3582701_3634438_3635183_3759364_3759882_3797237_3797382_3865357_3865513_3894503
ENSMUSG00000041625.16_0	chr14	-	1069	3	FSM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	7	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123150567	123128271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_123129229_123137887_123137945_123150512
ENSMUSG00000041625.16_1	chr14	-	1009	2	ISM	ENSMUSG00000041625.16	ENSMUST00000038075.12	1076	3	12635	0	12593	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTTGGTCCTTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123137939	123128271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_123129229_123137887
ENSMUSG00000041629.8_0	chr11	-	2607	3	FSM	ENSMUSG00000041629.8	ENSMUST00000120194.2	2619	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCCTAATTGGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	113574970	113552145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113554370_113568129_113568230_113574687
ENSMUSG00000041629.8_1	chr11	-	442	2	FSM	ENSMUSG00000041629.8	ENST00000581110.1	459	2	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCATAGCCTACAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	113574936	113554176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113554370_113574687
ENSMUSG00000041632.8_0	chr13	+	1837	11	FSM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGCTGTTGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99481299	99552064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_99481384_99484839_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041632.8_5	chr13	+	1755	10	ISM	ENSMUSG00000041632.8	ENSMUST00000052249.7	1849	11	3544	6	3544	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGGCTGTTGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	99484837	99552064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_99484918_99499472_99499544_99501732_99501792_99536769_99536885_99540011_99540091_99541495_99541612_99546316_99546420_99547785_99547929_99548702_99548874_99551246
ENSMUSG00000041638.19_0	chr5	+	8550	58	FSM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGCAGGAGTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	115703312	115760708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115703366_115709467_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ENSMUSG00000041638.19_10	chr5	+	8489	57	ISM	ENSMUSG00000041638.19	ENSMUST00000064454.12	8555	58	6161	7	6161	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGAAGCAGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	115709473	115760706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_115709571_115712637_115712702_115713223_115713356_115714178_115714288_115716950_115717050_115717134_115717270_115717693_115717763_115717845_115717955_115718563_115718639_115719061_115719191_115719548_115719600_115719839_115719939_115720322_115720497_115721456_115721610_115723864_115723958_115725847_115725924_115726034_115726195_115726992_115727183_115727259_115727385_115728303_115728483_115729032_115729127_115730123_115730238_115730367_115730567_115731635_115731792_115732091_115732274_115733051_115733133_115733351_115733496_115734914_115735043_115735124_115735315_115735432_115735504_115736759_115736926_115737130_115737326_115740444_115740692_115741271_115741394_115742068_115742184_115742876_115743057_115744531_115744753_115747287_115747357_115747524_115747664_115747749_115747947_115748080_115748224_115748866_115748985_115749082_115749299_115750646_115750812_115751414_115751577_115751782_115751876_115752134_115752279_115752389_115752660_115752919_115753034_115753427_115753659_115754409_115754604_115754692_115754808_115757355_115757453_115757710_115757860_115758202_115758311_115759559_115759779_115760083
ENSMUSG00000041642.19_11	chr1	+	5334	35	FSM	ENSMUSG00000041642.19	ENST00000422435.2	5352	35	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCACGCCCTGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	136059155	136101419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136094899_136094939_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101209
ENSMUSG00000041642.19_23	chr1	+	6998	35	FSM	ENSMUSG00000041642.19	ENST00000332129.6	7017	35	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCAGGTCTCTGGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	136059151	136104162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136059501_136072336_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101209_136102509_136103552
ENSMUSG00000041642.19_81	chr1	+	5286	33	FSM	ENSMUSG00000041642.19	ENST00000360529.9	5300	33	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACAGCCAATCCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	136072343	136102327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136072560_136072867_136073051_136075235_136075386_136075471_136075607_136075944_136076116_136076363_136076480_136076998_136077195_136078868_136079059_136079780_136079845_136079934_136080154_136080495_136080578_136080930_136081049_136081841_136082034_136083834_136084035_136085200_136085309_136086018_136086088_136086981_136087215_136087375_136087524_136087750_136087946_136088041_136088144_136089143_136089310_136089466_136089519_136089701_136089760_136090524_136090731_136090810_136090889_136092755_136092870_136096924_136097062_136097726_136097908_136098879_136099045_136099325_136099444_136099896_136100068_136100540_136100741_136101774
ENSMUSG00000041645.15_0	chr12	-	2844	9	FSM	ENSMUSG00000041645.15	ENSMUST00000044923.15	2850	9	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACATCCTGAGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	103392078	103374246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUSG00000041645.15_1	chr12	-	2795	8	ISM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	1191	5	1191	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACATCCTGAGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	103390848	103374246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130
ENSMUSG00000041645.15_17	chr12	-	2668	8	FSM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTTGAGTAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	103392082	103375876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103392037
ENSMUSG00000041645.15_18	chr12	-	2611	7	ISM	ENSMUSG00000041645.15	ENSMUST00000221211.2	2669	8	1239	0	1195	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTTGAGTAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	103390844	103375876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130
ENSMUSG00000041645.15_3	chr12	-	3039	9	FSM	ENSMUSG00000041645.15	ENSMUST00000110001.4	3063	9	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAGAGACATCCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	103392024	103374250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103374737_103376186_103376317_103377387_103377577_103382454_103382531_103383536_103384053_103384322_103384477_103385220_103385743_103390130_103390857_103391784
ENSMUSG00000041650.16_0	chr14	+	2576	24	FSM	ENSMUSG00000041650.16	ENSMUST00000038374.13	2592	24	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTCCAGTTCTCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	122771758	123127348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_122771872_122795126_122795205_122800190_122800239_122800330_122800400_122820028_122820143_122822468_122822523_122854165_122854298_122875792_122875830_122887663_122887743_122896089_122896193_122901665_122901761_122905932_122906084_122922293_122922438_122923514_122923590_122927510_122927580_122929591_122929668_122938466_122938578_122951434_122951538_122975313_122975417_123027767_123027867_123050605_123050660_123114175_123114317_123124458_123124537_123126898
ENSMUSG00000041654.16_0	chr11	-	2659	10	FSM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	113456579	113135680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041654.16_1	chr11	-	2581	9	ISM	ENSMUSG00000041654.16	ENSMUST00000071539.10	2664	10	3632	2	3632	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	113452950	113135680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113414291_113414451_113450336_113450376_113452831
ENSMUSG00000041654.16_2	chr11	-	2678	10	FSM	ENSMUSG00000041654.16	ENSMUST00000106633.10	2688	10	8	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	113456577	113135680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354776_113354922_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041654.16_5	chr11	-	2758	11	FSM	ENSMUSG00000041654.16	ENSMUST00000042657.16	2781	11	21	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGTGTTCCGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	113456573	113135680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_113137322_113138545_113138705_113141293_113141393_113196710_113196781_113260553_113260725_113354797_113354922_113413726_113413832_113414291_113414451_113450336_113450376_113452831_113452951_113456501
ENSMUSG00000041658.13_0	chrX	+	1958	10	FSM	ENSMUSG00000041658.13	ENST00000374941.9	1977	10	15	4	-13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCAGCCAGGCAAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	151922963	151954706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151923576_151924359_151924394_151926971_151927072_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041658.13_1	chrX	+	1440	11	FSM	ENSMUSG00000041658.13	ENST00000262850.7	1459	11	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGCTGAATATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	151923166	151954307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151923576_151924359_151924394_151926971_151927072_151931447_151931532_151933357_151933425_151936126_151936350_151941190_151941287_151943397_151943521_151946073_151946166_151953182_151953299_151954211
ENSMUSG00000041670.20_0	chr1	-	3116	24	FSM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	2	8	2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATCACATTGCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	22525732	22358467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668
ENSMUSG00000041670.20_1	chr1	-	3050	23	ISM	ENSMUSG00000041670.20	ENST00000401910.7	3126	24	1903	8	1903	7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAATCACATTGCAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	22523831	22358467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22416516_22416753_22443567_22443735_22449651_22449765_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722
ENSMUSG00000041670.20_27	chr1	-	2673	22	FSM	ENSMUSG00000041670.20	ENST00000425662.6	2687	22	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAGAACAAGGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	22548419	22358482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_22358865_22360283_22360424_22361236_22361339_22363045_22363159_22367081_22367221_22467674_22467788_22474667_22474740_22491964_22492055_22496120_22496184_22497711_22497838_22498715_22498873_22503022_22503095_22504097_22504252_22504353_22504526_22507271_22507403_22511805_22511919_22514768_22514816_22518515_22518640_22522234_22522335_22523722_22523834_22525668_22525734_22548332
ENSMUSG00000041671.14_0	chr6	+	2818	12	FSM	ENSMUSG00000041671.14	ENSMUST00000041852.8	2831	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTACTAAGCCGTAGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	142291386	142308977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_142291534_142293283_142293365_142294248_142294369_142296787_142296917_142299250_142299325_142300350_142300512_142302208_142302310_142303105_142303239_142304124_142304238_142304761_142304885_142306584_142306723_142307479
ENSMUSG00000041679.10_4	chr8	-	1611	5	FSM	ENSMUSG00000041679.10	ENST00000637079.1	1628	5	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGAGGCCAGGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	106049991	106039416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106039578_106039676_106039895_106040052_106040197_106041707_106042701_106049896
ENSMUSG00000041679.10_7	chr8	-	436	2	FSM	ENSMUSG00000041679.10	ENST00000485549.1	451	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACTCTGCTGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106049991	106042422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106042764_106049896
ENSMUSG00000041679.10_8	chr8	-	343	1	NIC	ENSMUSG00000041679.10	novel	1922	5	NA	NA	7235	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCACTCTGCTGGCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	106042765	106042422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_106042400_106042800
ENSMUSG00000041684.12_0	chr1	+	3306	11	FSM	ENSMUSG00000041684.12	ENSMUST00000035991.8	3313	11	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAATCCTATGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	44158327	44183669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44158531_44159333_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_1	chr1	+	3545	10	FSM	ENSMUSG00000041684.12	ENSMUST00000114709.3	3570	10	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAAAAAGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	44159134	44183912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44159435_44165425_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008
ENSMUSG00000041684.12_2	chr1	+	2616	10	FSM	ENSMUSG00000041684.12	ENST00000257336.6	2634	10	10	8	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTAATCCTATGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	44165426	44183669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44166027_44166797_44166925_44167887_44167984_44168419_44168525_44168742_44168838_44176143_44176277_44177732_44177820_44180937_44181035_44182008_44182637_44183021
ENSMUSG00000041685.17_0	chr13	-	5112	26	NIC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	5	-5	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCAATTGACTTTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	98951952	98859915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98888841_98888854_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUSG00000041685.17_1	chr13	-	5089	25	NIC	ENSMUSG00000041685.17	novel	5122	26	NA	NA	17	-4	combination_of_known_splicesites	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAATTGACTTTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	98951940	98859914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_-_98862285_98862568_98862734_98866696_98866762_98867284_98867485_98868584_98868718_98869025_98869182_98871526_98871639_98879918_98880049_98882308_98882413_98884723_98884813_98886359_98886403_98888414_98888440_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUSG00000041685.17_12	chr13	-	1544	14	NIC	ENSMUSG00000041685.17	novel	1586	15	NA	NA	24	-6	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGACTGTCAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	98951933	98888385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_-_98888440_98891587_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUSG00000041685.17_15	chr13	-	1487	13	ISM	ENSMUSG00000041685.17	ENSMUST00000109403.2	1523	14	28	1239	28	-1239	5prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTATCTGAACATAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	98951929	98891586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_98891762_98892073_98892134_98899339_98899365_98900197_98900271_98901012_98901058_98912328_98912426_98913896_98913996_98921283_98921389_98925870_98926024_98926239_98926382_98932800_98932876_98942813_98942906_98951583
ENSMUSG00000041688.17_0	chrX	-	6511	12	FSM	ENSMUSG00000041688.17	ENSMUST00000112835.8	6519	12	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCAGCACTGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	144288139	144229427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_144233095_144233426_144234300_144235390_144235624_144236347_144236471_144242994_144243186_144244731_144244882_144254413_144254560_144258715_144258809_144259190_144259336_144263000_144263455_144279984_144280048_144287766
ENSMUSG00000041695.3_0	chr11	+	5396	2	FSM	ENSMUSG00000041695.3	ENSMUST00000042970.3	5444	2	28	20	28	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATTGAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	110957017	110967627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_110957161_110962374
ENSMUSG00000041696.15_0	chr9	+	2366	5	FSM	ENSMUSG00000041696.15	ENSMUST00000085453.6	2390	5	17	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAACAAATTTTCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	65305823	65319980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65305950_65308200_65308258_65314858_65314933_65315591_65315783_65318062
ENSMUSG00000041697.9_0	chr5	-	559	3	FSM	ENSMUSG00000041697.9	ENSMUST00000040154.9	571	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5481	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGACGGTACGATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	115487029	115483701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115483986_115486623_115486767_115486897
ENSMUSG00000041702.8_0	chr12	-	8135	12	FSM	ENSMUSG00000041702.8	ENSMUST00000223554.2	8157	12	16	6	16	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAACCGCTGAGTTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	102844649	102747061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102752192_102754193_102754644_102756963_102757143_102760004_102760195_102761431_102761576_102774158_102774320_102777378_102777455_102778893_102779103_102803876_102804957_102806358_102806547_102807297_102807451_102844474
ENSMUSG00000041703.8_0	chr14	-	4747	2	FSM	ENSMUSG00000041703.8	ENSMUST00000039118.7	4767	2	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATTGCTACATTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	122703069	122694206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_122697188_122701303
ENSMUSG00000041712.8_0	chr12	+	3239	11	FSM	ENSMUSG00000041712.8	ENSMUST00000046404.8	3261	11	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAAAATAGTTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102724237	102743956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102724438_102727629_102727764_102728179_102728241_102729716_102729813_102732066_102732121_102732504_102732611_102734328_102734538_102735352_102735503_102736039_102736203_102737477_102737540_102741952
ENSMUSG00000041716.8_0	chr12	-	2763	2	FSM	ENSMUSG00000041716.8	ENSMUST00000174651.2	2795	2	14	18	14	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAATGATAATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	102724917	102708008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102709654_102723799
ENSMUSG00000041718.17_0	chrX	+	1780	4	FSM	ENSMUSG00000041718.17	ENSMUST00000070801.11	1802	4	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAATAGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	143100807	143108179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_143101118_143102894_143103058_143105007_143105147_143107011
ENSMUSG00000041720.15_2	chr16	-	6419	55	FSM	ENSMUSG00000041720.15	ENSMUST00000036161.12	6431	55	3	9	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATGTGCTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	17224175	17098223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17224118
ENSMUSG00000041720.15_44	chr16	-	1221	11	FSM	ENSMUSG00000041720.15	ENST00000611748.1	1237	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGTAACTACCCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	17121300	17100485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17117305_17117434_17118856_17118965_17120854_17121007_17121148
ENSMUSG00000041720.15_6	chr16	-	6327	55	FSM	ENSMUSG00000041720.15	ENSMUST00000232232.2	6630	55	81	222	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAAGCCTAGCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	17223676	17098437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_17098485_17098580_17098665_17098883_17098974_17099712_17099873_17100149_17100271_17100480_17100607_17100686_17100792_17101163_17101274_17102310_17102382_17102459_17102533_17103070_17103142_17104515_17104646_17108978_17109100_17110743_17110798_17111706_17111875_17113235_17113327_17114759_17114954_17115073_17115154_17115414_17115535_17117305_17117434_17118856_17118965_17120854_17121007_17121148_17121308_17125566_17125695_17125929_17126087_17127169_17127263_17130215_17130336_17133412_17133503_17134825_17134910_17135157_17135240_17136143_17136269_17136346_17136418_17140851_17140935_17142976_17143111_17143257_17143395_17143804_17143914_17166578_17166630_17168625_17168795_17170601_17170706_17171913_17172098_17172734_17172831_17173947_17174081_17175409_17175540_17176150_17176252_17176758_17176951_17178360_17178458_17181810_17181877_17185267_17185417_17191213_17191281_17194781_17195042_17196305_17196379_17199664_17199754_17204099_17204194_17207204_17207322_17223497
ENSMUSG00000041729.16_0	chr9	-	3592	12	FSM	ENSMUSG00000041729.16	ENSMUST00000048043.12	3610	12	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGCCATGTATCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	62444313	62326778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_62328696_62333072_62333213_62333422_62333514_62333812_62333926_62335217_62335315_62336230_62336336_62336507_62336625_62338583_62338749_62339638_62339789_62361810_62361928_62396522_62396724_62443934
ENSMUSG00000041731.14_0	chr19	-	3218	11	FSM	ENSMUSG00000041731.14	ENSMUST00000047666.5	3239	11	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATTATTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24839207	24660388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24661939_24686591_24686727_24705032_24705217_24710905_24711042_24727728_24727845_24793021_24793177_24793774_24793966_24797483_24797610_24801655_24801803_24812106_24812270_24838892
ENSMUSG00000041733.11_0	chr5	+	2024	7	FSM	ENSMUSG00000041733.11	ENSMUST00000040421.11	2037	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTCCTCAGATGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	115417732	115435026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115417974_115421624_115421775_115422449_115422672_115428992_115429100_115432885_115432975_115433724_115433837_115433923
ENSMUSG00000041734.16_0	chr3	-	7217	16	FSM	ENSMUSG00000041734.16	ENSMUST00000159976.8	7236	16	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATGTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	87081996	86985907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048427_87081702
ENSMUSG00000041734.16_2	chr3	-	7247	16	FSM	ENSMUSG00000041734.16	ENSMUST00000107618.9	7278	16	30	1	-17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAGTACCATGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	87082024	86985908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86990928_86991173_86991252_86992111_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ENSMUSG00000041734.16_4	chr3	-	2137	14	FSM	ENSMUSG00000041734.16	ENSMUST00000041732.9	2160	14	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGTGCACACTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	87081840	86991940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_86992252_86992388_86992497_86993688_86993888_86995472_86995574_86995665_86995793_86996457_86996586_86996788_86996938_86997102_86997209_86997764_86997916_86999411_86999570_87002943_87003094_87005048_87005214_87048283_87048430_87081702
ENSMUSG00000041736.8_0	chr15	+	829	4	FSM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAACAGACTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	83447792	83458396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_83447846_83455585_83455797_83456400_83456540_83457970
ENSMUSG00000041736.8_4	chr15	+	770	3	ISM	ENSMUSG00000041736.8	ENSMUST00000047419.8	837	4	7799	8	7799	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTAACAGACTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	83455591	83458396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_83455797_83456400_83456540_83457970
ENSMUSG00000041740.17_0	chr5	-	3454	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112097.8	3476	17	16	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCAACAAGGCTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	115410941	115379476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387233_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUSG00000041740.17_17	chr5	-	2616	17	FSM	ENSMUSG00000041740.17	ENST00000413266.6	2636	17	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACACTCAACTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	115410460	115379845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387245_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUSG00000041740.17_3	chr5	-	3096	17	FSM	ENSMUSG00000041740.17	ENSMUST00000112096.9	3112	17	9	7	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	115410945	115379835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115380121_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUSG00000041740.17_5	chr5	-	3088	17	FSM	ENSMUSG00000041740.17	ENSMUST00000040555.15	3106	17	11	7	11	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGAGCCGCCTTCCCGA	NA	NA	NA	NA	NA	NA	NA	NA	115410940	115379835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115380118_115380451_115380611_115380692_115380751_115382079_115382181_115383907_115384064_115384938_115385041_115385227_115385346_115386640_115386775_115386973_115387230_115387455_115387582_115388028_115388190_115389124_115389262_115389335_115389521_115393408_115393500_115395032_115395233_115398177_115398375_115410315
ENSMUSG00000041747.4_0	chr13	-	4105	13	FSM	ENSMUSG00000041747.4	ENSMUST00000040972.4	4120	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAAGACTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	98399541	98383359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395975_98397306_98397479_98399382
ENSMUSG00000041747.4_7	chr13	-	1485	12	FSM	ENSMUSG00000041747.4	ENST00000508491.1	1510	12	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGGAATGACAGCGACCC	NA	NA	NA	NA	NA	NA	NA	NA	98397456	98385741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98385885_98387079_98387139_98387292_98387427_98388436_98388539_98389252_98389403_98390151_98390237_98391426_98391563_98393608_98393735_98394343_98394523_98395612_98395798_98395881_98395918_98397306
ENSMUSG00000041750.14_0	chr3	+	489	2	FSM	ENSMUSG00000041750.14	ENST00000368168.4	515	2	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1074	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAATAAAATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	86895598	86899209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_86896031_86899152
ENSMUSG00000041757.18_0	chr1	+	6338	24	FSM	ENSMUSG00000041757.18	ENST00000272203.8	6348	24	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGGTGTGTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	133109111	133231168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_133109339_133186746_133186828_133187779_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133215207_133215338_133215511_133215623_133220095_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446_133229503_133230363
ENSMUSG00000041757.18_22	chr1	+	5462	25	FSM	ENSMUSG00000041757.18	ENST00000637508.1	5477	25	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	4701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAGTGATCATGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	133187789	133229377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_133187895_133191534_133191640_133192398_133192472_133194303_133194405_133197797_133197941_133199946_133200430_133201595_133202113_133202530_133202618_133203549_133203604_133207110_133207192_133208076_133208146_133209520_133209602_133209854_133210005_133211008_133211105_133212617_133212730_133212984_133213125_133213984_133214135_133215207_133215338_133215511_133215623_133220095_133220267_133221443_133221612_133221691_133221826_133222300_133222447_133226657_133226782_133227446
ENSMUSG00000041762.17_0	chr2	-	5056	17	FSM	ENSMUSG00000041762.17	ENSMUST00000076463.12	5061	17	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGACAGCTTTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	73216911	73171849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73174102_73178480_73178619_73179970_73180036_73182192_73182289_73183960_73184098_73186941_73187047_73192768_73192980_73194275_73194367_73194511_73194597_73197824_73197943_73198657_73198742_73200329_73200486_73201308_73201475_73203958_73204359_73212167_73212653_73213138_73213303_73216608
ENSMUSG00000041763.15_0	chr1	+	4643	30	FSM	ENSMUSG00000041763.15	ENSMUST00000087933.10	4649	30	6	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTATAAATAAAAGTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	43973172	44042131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44024575_44024615_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041763.15_11	chr1	+	4610	29	FSM	ENSMUSG00000041763.15	ENSMUST00000188313.7	4631	29	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAGCTATTCACAATTG	NA	NA	NA	NA	NA	NA	NA	NA	43973185	44042150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_43973414_43979269_43979399_43988471_43988568_43990266_43990372_43992416_43992542_43993736_43993901_43995630_43995786_43996595_43996673_43999243_43999372_44000027_44000128_44008041_44008191_44009560_44009677_44010723_44010893_44011689_44011848_44012603_44012681_44014575_44014683_44016366_44016522_44017572_44017690_44017894_44017996_44019467_44019565_44020889_44021028_44022231_44022477_44022673_44022753_44029670_44029823_44030422_44030520_44031423_44031555_44038787_44038996_44040478_44040599_44041263
ENSMUSG00000041765.7_0	chr14	+	2126	9	FSM	ENSMUSG00000041765.7	ENSMUST00000039803.7	2139	9	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTTCAGTAGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	122116044	122258446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_122116187_122142534_122142663_122144702_122144823_122145622_122145733_122211020_122211145_122220679_122220728_122231636_122231883_122246202_122246326_122257361
ENSMUSG00000041769.14_0	chr7	+	2071	9	FSM	ENSMUSG00000041769.14	ENSMUST00000041097.13	2081	9	1	9	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAATGCCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	138448088	138484777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138448245_138448340_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUSG00000041769.14_1	chr7	+	1931	8	FSM	ENSMUSG00000041769.14	ENSMUST00000155672.8	1938	8	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAATGCCACTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	138448324	138484777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138448434_138470138_138470237_138471418_138471585_138472118_138472232_138474602_138474781_138475848_138476014_138478184_138478447_138483937
ENSMUSG00000041773.9_0	chr13	+	4726	3	FSM	ENSMUSG00000041773.9	ENSMUST00000041623.9	4737	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTCTTCATTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	97377617	97389536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97378038_97381478_97383293_97387044
ENSMUSG00000041774.17_0	chr16	+	1690	8	FSM	ENSMUSG00000041774.17	ENSMUST00000231726.2	1713	8	21	2	21	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCTGCTTACTCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	16962505	16969147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16962803_16963071_16963246_16963825_16963944_16964830_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16968664
ENSMUSG00000041774.17_1	chr16	+	1575	3	FSM	ENSMUSG00000041774.17	ENSMUST00000232344.2	1580	3	2	3	-1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGGCTGGTTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	16964841	16966707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16965011_16965096_16965257_16965461
ENSMUSG00000041774.17_2	chr16	+	1282	5	FSM	ENSMUSG00000041774.17	ENSMUST00000069064.7	1297	5	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTTGGCTGGTTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	16964854	16966707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16965011_16965096_16965257_16965461_16965562_16965660_16965839_16966019
ENSMUSG00000041775.8_0	chr7	-	1474	2	FSM	ENSMUSG00000041775.8	ENSMUST00000075667.5	1502	2	13	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAACAAAAAATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	138447976	138437576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_138438760_138447685
ENSMUSG00000041775.8_1	chr7	-	1316	2	FSM	ENSMUSG00000041775.8	ENSMUST00000118810.2	1350	2	33	1	33	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAACAGTTTAATTTAA	NA	NA	NA	NA	NA	NA	NA	NA	138447953	138437607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_138438656_138447685
ENSMUSG00000041777.13_0	chr2	-	2777	9	NIC	ENSMUSG00000041777.13	novel	2821	10	NA	NA	19	-14	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGCAACTAAAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	73143026	73113462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_73115380_73116681_73116768_73117952_73118060_73134083_73134202_73136233_73136283_73136620_73136686_73137198_73137273_73140800_73140896_73142760
ENSMUSG00000041779.6_0	chr1	-	1448	11	FSM	ENSMUSG00000041779.6	ENSMUST00000037998.6	6492	11	9	5035	9	-1131	multi-exon	FALSE	canonical	NA	NA	NA	NA	1602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTGAGTTTTCTCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	21149444	21071557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_21071860_21073193_21073358_21074061_21074206_21074449_21074555_21075790_21075862_21076373_21076459_21077076_21077136_21083016_21083134_21083625_21083736_21107620_21107685_21149217
ENSMUSG00000041781.10_0	chr12	+	5721	15	FSM	ENSMUSG00000041781.10	ENSMUST00000047357.10	5732	15	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGTCATGTTTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	101942254	101972680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_101942394_101948172_101948355_101949434_101949595_101949678_101949785_101951479_101951610_101953516_101953633_101954891_101955080_101956047_101956339_101963077_101963179_101963513_101963715_101964795_101964949_101965631_101965858_101966935_101967236_101968886_101969022_101969387
ENSMUSG00000041794.14_0	chr9	+	2703	15	FSM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCCCGTGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	120164703	120302204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_120164807_120217177_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511_120296631_120301837
ENSMUSG00000041794.14_6	chr9	+	2602	14	ISM	ENSMUSG00000041794.14	ENST00000425621.5	2712	15	52480	1	52480	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGCCCCGTGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	120217175	120302204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_120217400_120246205_120246343_120248716_120248798_120251245_120251344_120251526_120251608_120253657_120253805_120256573_120256728_120261418_120262045_120270407_120270648_120290473_120290636_120293759_120293865_120293966_120294028_120296511_120296631_120301837
ENSMUSG00000041798.16_0	chr11	-	1592	10	FSM	ENSMUSG00000041798.16	ENST00000671824.1	1605	10	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAATCCAGGCAAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	5899764	5851674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5851815_5852084_5852319_5853099_5853256_5854326_5854545_5856476_5856577_5856682_5856779_5859082_5859203_5860277_5860433_5860861_5861025_5899554
ENSMUSG00000041801.6_0	chr1	+	1419	2	FSM	ENSMUSG00000041801.6	ENSMUST00000038945.6	1435	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACGCTGTCTACTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	135693865	135696867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135694633_135696215
ENSMUSG00000041809.6_0	chr1	+	2134	11	FSM	ENSMUSG00000041809.6	ENSMUST00000038447.6	2146	11	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTGAAGACTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21021912	21061054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_21022021_21025558_21025781_21030353_21030642_21031376_21031527_21037547_21037741_21042998_21043220_21045122_21045264_21048866_21049081_21049633_21049782_21059591_21059827_21060840
ENSMUSG00000041815.15_0	chr15	-	3281	9	FSM	ENSMUSG00000041815.15	ENSMUST00000058793.14	3299	9	10	8	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAACTTTGAGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	83033575	83010184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83021668_83021756_83022332_83022724_83033395
ENSMUSG00000041815.15_1	chr15	-	3136	8	FSM	ENSMUSG00000041815.15	ENSMUST00000100375.11	3157	8	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTAACTTTGAGCTATA	NA	NA	NA	NA	NA	NA	NA	NA	83033517	83010184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83012257_83013394_83013462_83015681_83015812_83016777_83016856_83017347_83017528_83019494_83019591_83022332_83022724_83033395
ENSMUSG00000041827.16_0	chr5	+	1359	5	FSM	ENSMUSG00000041827.16	ENST00000339275.10	1377	5	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGACGGAGGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115061366	115075438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115073979_115074128_115074976
ENSMUSG00000041827.16_2	chr5	+	1450	6	FSM	ENSMUSG00000041827.16	ENST00000679655.1	1466	6	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGACGGAGGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115061515	115075438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074978
ENSMUSG00000041827.16_3	chr5	+	1458	6	FSM	ENSMUSG00000041827.16	ENSMUST00000112143.4	2181	6	187	536	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACGACGGAGGGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	115061509	115075438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115061669_115066081_115066365_115067898_115068063_115070781_115071024_115073979_115074128_115074976
ENSMUSG00000041836.11_0	chr7	+	5407	21	FSM	ENSMUSG00000041836.11	ENSMUST00000073961.8	5410	21	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTTCTGTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	135139555	135288022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_135139846_135203193_135203217_135245586_135245706_135253481_135253576_135253818_135253893_135255621_135255759_135260781_135260873_135264972_135265050_135265667_135265705_135266715_135266814_135269279_135269400_135270725_135270890_135271450_135271587_135272427_135272578_135272836_135272931_135274473_135274551_135275976_135276112_135279933_135280060_135280821_135280989_135283280_135283417_135284960
ENSMUSG00000041836.11_11	chr7	+	4956	18	FSM	ENSMUSG00000041836.11	ENSMUST00000209979.2	4959	18	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTTCTGTCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	135253668	135288022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_135253744_135253818_135253893_135255621_135255759_135260781_135260873_135264972_135265050_135265667_135265705_135266715_135266814_135269279_135269400_135270725_135270890_135271450_135271587_135272427_135272578_135272836_135272931_135274473_135274551_135275976_135276112_135279933_135280060_135280821_135280989_135283280_135283417_135284960
ENSMUSG00000041836.11_13	chr7	+	242	3	ISM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	338	14	151	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAGCAAATAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135253816	135260815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_135253893_135255626_135255759_135260781
ENSMUSG00000041836.11_3	chr7	+	2203	20	FSM	ENSMUSG00000041836.11	ENSMUST00000210833.2	2209	20	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTTTGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135207556	135285075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_135207613_135245586_135245706_135253481_135253576_135253818_135253893_135255621_135255759_135260781_135260873_135264972_135265050_135265667_135265705_135266715_135266814_135269279_135269400_135270725_135270890_135271450_135271587_135272427_135272578_135272836_135272931_135274473_135274551_135275976_135276112_135279933_135280060_135280821_135280989_135283280_135283417_135284960
ENSMUSG00000041836.11_5	chr7	+	328	4	FSM	ENSMUSG00000041836.11	ENST00000471218.5	351	4	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTAGCAAATAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135253487	135260815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_135253576_135253818_135253893_135255626_135255759_135260781
ENSMUSG00000041837.5_0	chr9	+	2418	5	FSM	ENSMUSG00000041837.5	ENSMUST00000048184.4	2419	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGCCCCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65253385	65266924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65254291_65261891_65262031_65263526_65263764_65263999_65264088_65265875
ENSMUSG00000041840.9_0	chr18	-	925	8	ISM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	749	10	9	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAAGGCATTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77854731	77845277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563
ENSMUSG00000041840.9_10	chr18	-	298	3	FSM	ENSMUSG00000041840.9	ENST00000585518.5	315	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCGGTAATTGTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	77854730	77847143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77847209_77848167_77848234_77854563
ENSMUSG00000041840.9_2	chr18	-	991	9	FSM	ENSMUSG00000041840.9	ENSMUST00000048192.9	1003	9	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAAAGGCATTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	77855478	77845277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77845454_77846169_77846218_77847136_77847209_77848167_77848234_77848606_77848731_77849681_77849817_77851772_77851909_77854563_77854739_77855419
ENSMUSG00000041841.9_0	chr15	+	832	4	FSM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	9445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAACTCATAGTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	5146126	5148619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5146167_5146768_5146905_5147100_5147186_5148048
ENSMUSG00000041841.9_4	chr15	+	783	3	ISM	ENSMUSG00000041841.9	ENSMUST00000045356.9	835	4	651	3	651	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAACTCATAGTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	5146777	5148619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_5146905_5147100_5147186_5148048
ENSMUSG00000041842.16_0	chr3	-	5832	11	ISM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	5667	9	4729	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATACCTATGCTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	84382069	84349513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446
ENSMUSG00000041842.16_1	chr3	-	5901	12	FSM	ENSMUSG00000041842.16	ENSMUST00000107689.7	5918	12	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATACCTATGCTATGCC	NA	NA	NA	NA	NA	NA	NA	NA	84387728	84349513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84353838_84356056_84356222_84358676_84358795_84360823_84360895_84362093_84362202_84362294_84362366_84364301_84364403_84364492_84364579_84371578_84371682_84372728_84372791_84381446_84382085_84387674
ENSMUSG00000041845.12_0	chr19	-	1328	5	FSM	ENSMUSG00000041845.12	ENSMUST00000048197.10	1344	5	9	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACTAACACATTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	4489451	4475493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4476285_4476654_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUSG00000041845.12_3	chr19	-	1129	5	FSM	ENSMUSG00000041845.12	ENSMUST00000235680.2	1151	5	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCTATTAGTGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	4489412	4475700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4476285_4476607_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUSG00000041845.12_4	chr19	-	1486	4	FSM	ENSMUSG00000041845.12	ENSMUST00000117462.2	1495	4	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATTAGTGTCCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	4489445	4475699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4476790_4482082_4482193_4482795_4482884_4489247
ENSMUSG00000041845.12_5	chr19	-	400	3	FSM	ENSMUSG00000041845.12	ENST00000532559.1	417	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAATTGTTGCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	4489371	4476143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4476285_4476654_4476790_4489247
ENSMUSG00000041846.16_0	chr12	-	4497	15	FSM	ENSMUSG00000041846.16	ENSMUST00000048305.10	4516	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCATTAAGTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	101049910	101005674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019726_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUSG00000041846.16_4	chr12	-	4077	15	FSM	ENSMUSG00000041846.16	ENSMUST00000163095.9	4083	15	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAATATAGCCTAACGTG	NA	NA	NA	NA	NA	NA	NA	NA	101049954	101006177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101024582_101025201_101031242_101031342_101034895_101034952_101048987
ENSMUSG00000041846.16_5	chr12	-	3157	13	FSM	ENSMUSG00000041846.16	ENST00000555462.5	3174	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTAGATGTGGTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	101049882	101006308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101007039_101008083_101008311_101008713_101008905_101009701_101009845_101010748_101010919_101015918_101016078_101017592_101017696_101017789_101017922_101019687_101019844_101021788_101021906_101022008_101022087_101034895_101034952_101048987
ENSMUSG00000041849.8_0	chr15	-	5919	3	ISM	ENSMUSG00000041849.8	ENSMUST00000118365.3	5995	4	176	6	176	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTTTTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5137845	5125468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_5130578_5134384_5134919_5137569
ENSMUSG00000041849.8_1	chr15	-	5983	4	FSM	ENSMUSG00000041849.8	ENSMUST00000118365.3	5995	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTACTTTTTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5138015	5125468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_5130578_5134384_5134919_5137569_5137859_5137964
ENSMUSG00000041852.16_0	chr15	-	7413	5	FSM	ENSMUSG00000041852.16	ENSMUST00000048966.7	7417	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTACTCTTAAGTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	82796331	82692636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82693989_82699811_82699862_82709431_82709526_82735713_82741486_82796186
ENSMUSG00000041852.16_1	chr15	-	7313	6	FSM	ENSMUSG00000041852.16	ENSMUST00000109510.10	7323	6	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTTTTAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82796307	82692835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82693989_82698681_82698805_82699811_82699862_82709431_82709526_82735713_82741486_82796186
ENSMUSG00000041859.11_0	chr1	-	3018	17	FSM	ENSMUSG00000041859.11	ENSMUST00000053266.11	3031	17	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTGTCTGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	20890528	20873196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_20873879_20875040_20875132_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016_20888130_20890354
ENSMUSG00000041859.11_10	chr1	-	2333	16	FSM	ENSMUSG00000041859.11	ENST00000616552.4	2349	16	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAAGTTGTTGCTACCA	NA	NA	NA	NA	NA	NA	NA	NA	20888121	20873685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_20873879_20875040_20875118_20875486_20875564_20876020_20876125_20876965_20877107_20878944_20879096_20879819_20879947_20880281_20880457_20882188_20882398_20882787_20882920_20883184_20883339_20884622_20884732_20884912_20885152_20886872_20887004_20887466_20887676_20888016
ENSMUSG00000041870.18_0	chr5	+	3698	15	FSM	ENSMUSG00000041870.18	ENSMUST00000102578.11	3717	15	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAAAGGATTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	114912746	114943873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114913386_114924001_114924135_114924745_114924871_114927368_114927415_114929324_114929469_114930160_114930351_114933741_114933809_114934894_114934977_114935913_114935976_114936581_114936713_114937444_114937603_114938765_114938874_114939716_114939878_114941617_114941686_114942289
ENSMUSG00000041879.14_0	chr1	-	6239	24	FSM	ENSMUSG00000041879.14	ENSMUST00000041023.14	6247	24	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTCAGTTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135358229	135310049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135313216_135313664_135313742_135313956_135314059_135314421_135314545_135315111_135315246_135316248_135316416_135317050_135317327_135318275_135318405_135319233_135319383_135321873_135322101_135327781_135327942_135329970_135330111_135331025_135331133_135331961_135332061_135333558_135333711_135334254_135334314_135334496_135334598_135334689_135334810_135335725_135335813_135337130_135337220_135346974_135347177_135347728_135347816_135348029_135348092_135358005
ENSMUSG00000041881.14_0	chr17	+	517	4	FSM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34043553	34057288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34043655_34044574_34044625_34048640_34048791_34057072
ENSMUSG00000041881.14_2	chr17	+	417	3	ISM	ENSMUSG00000041881.14	ENSMUST00000048249.8	528	4	1028	3	1028	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTCTTTTCTTAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34044573	34057288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34044625_34048640_34048791_34057072
ENSMUSG00000041889.8_0	chr1	-	1744	5	FSM	ENSMUSG00000041889.8	ENSMUST00000041240.4	1763	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGAAACTATGAGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	135302964	135298802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135299735_135299934_135300103_135300889_135301024_135302115_135302288_135302626
ENSMUSG00000041890.18_0	chr5	-	5017	19	FSM	ENSMUSG00000041890.18	ENSMUST00000112185.9	5032	19	15	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGTGCCCCCTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	114911541	114865467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890389_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUSG00000041890.18_10	chr5	-	4875	18	FSM	ENSMUSG00000041890.18	ENSMUST00000043283.14	4938	18	58	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTCATGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	114911495	114865476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114877093_114877343_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUSG00000041890.18_25	chr5	-	2969	20	FSM	ENSMUSG00000041890.18	ENSMUST00000086564.11	2984	20	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCATGCTGATGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	114911515	114867642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114868456_114869052_114869117_114871253_114871443_114871921_114872005_114875408_114875499_114877093_114877343_114881791_114881942_114883489_114883633_114886244_114886357_114887303_114887402_114887622_114887696_114890339_114890392_114891339_114891386_114899633_114899729_114902407_114902539_114902647_114902735_114904512_114904619_114905156_114905270_114907677_114907812_114911374
ENSMUSG00000041891.17_0	chr18	-	3573	14	FSM	ENSMUSG00000041891.17	ENSMUST00000048260.15	3581	14	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATGTCTGTATCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	66135703	66113809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_66115782_66116895_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041891.17_2	chr18	-	4663	13	FSM	ENSMUSG00000041891.17	ENSMUST00000236866.2	4676	13	10	3	-8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAAATTGGTTTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	66135700	66113830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_66116959_66117223_66117346_66120825_66120977_66124402_66124474_66124564_66124759_66126145_66126279_66126649_66126709_66127855_66127980_66129752_66129853_66130670_66130733_66131445_66131554_66131636_66131792_66135444
ENSMUSG00000041895.16_0	chr11	-	2036	13	FSM	ENSMUSG00000041895.16	ENSMUST00000103060.10	2050	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATTTGTGAGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	109502250	109464162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109464794_109467882_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041895.16_11	chr11	-	3319	12	FSM	ENSMUSG00000041895.16	ENSMUST00000047186.10	3338	12	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGCTTCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109502243	109465961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109467984_109468400_109468520_109469116_109469225_109470452_109470618_109473197_109473306_109473952_109474024_109474900_109474994_109475920_109476019_109487928_109488026_109494498_109494669_109496710_109496794_109502058
ENSMUSG00000041907.10_0	chr1	+	271	2	FSM	ENSMUSG00000041907.10	ENST00000436841.1	280	2	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTAGACAAGAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	42992332	42992841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_42992394_42992631
ENSMUSG00000041907.10_1	chr1	+	206	1	ISM	ENSMUSG00000041907.10	ENST00000436841.1	280	2	305	7	305	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTAGACAAGAGATCG	NA	NA	NA	NA	NA	NA	NA	NA	42992635	42992841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_42992600_42992800
ENSMUSG00000041911.4_0	chr2	+	4087	3	FSM	ENSMUSG00000041911.4	ENSMUST00000037119.4	4111	3	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGAGCCATTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	71358473	71364317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71360651_71361300_71361501_71362607
ENSMUSG00000041912.13_0	chr3	+	5687	14	FSM	ENSMUSG00000041912.13	ENSMUST00000166032.8	5692	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTTTGGGAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94320579	94341970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
ENSMUSG00000041912.13_10	chr3	+	2570	12	ISM	ENSMUSG00000041912.13	ENSMUST00000045245.10	2642	13	9505	0	23	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTATCTAAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	94330129	94338798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866
ENSMUSG00000041912.13_2	chr3	+	1226	6	FSM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATATTTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	94320623	94333690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041912.13_5	chr3	+	2643	13	FSM	ENSMUSG00000041912.13	ENSMUST00000197901.5	2652	13	0	9	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTAAAAACACATACTCAG	NA	NA	NA	NA	NA	NA	NA	NA	94320624	94338805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94320670_94330108_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866
ENSMUSG00000041912.13_8	chr3	+	5598	13	ISM	ENSMUSG00000041912.13	ENSMUST00000166032.8	5692	14	9528	5	1	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTTTGGGAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	94330107	94341970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097_94333420_94335161_94335323_94335452_94335626_94335966_94336032_94336346_94336499_94336663_94336766_94337357_94337455_94337866_94337959_94338124
ENSMUSG00000041912.13_9	chr3	+	1173	5	ISM	ENSMUSG00000041912.13	ENSMUST00000200486.5	1231	6	9492	5	9	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATATTTTATGTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	94330115	94333690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94330259_94331001_94331109_94331807_94331998_94332869_94333010_94333097
ENSMUSG00000041915.10_3	chr18	+	3349	8	FSM	ENSMUSG00000041915.10	ENSMUST00000115808.4	3385	8	8	28	8	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAATGCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31892940	31915768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_4	chr18	+	4364	7	FSM	ENSMUSG00000041915.10	ENST00000680886.1	4379	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAATAAATCATAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	31893151	31917105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31893248_31894832_31894944_31904722_31905168_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_6	chr18	+	3151	8	FSM	ENSMUSG00000041915.10	ENSMUST00000234413.2	3181	8	3	27	3	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAATGCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31894131	31915768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31894241_31894832_31894944_31904722_31905168_31907288_31907400_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041915.10_7	chr18	+	4270	6	ISM	ENSMUSG00000041915.10	ENST00000680886.1	4379	7	1687	7	-26	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAATAAATCATAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	31894830	31917105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_31894944_31904722_31905168_31907689_31907805_31909039_31909131_31911909_31912007_31913696
ENSMUSG00000041921.17_0	chr2	+	1290	10	FSM	ENSMUSG00000041921.17	ENSMUST00000037210.9	1321	10	6	25	6	-25	multi-exon	TRUE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	71283625	71355510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71283743_71337128_71337287_71340084_71340235_71341755_71341905_71342469_71342513_71345980_71346145_71352876_71352975_71354145_71354194_71355060_71355140_71355226
ENSMUSG00000041923.16_0	chr18	-	2213	9	FSM	ENSMUSG00000041923.16	ENST00000589544.5	2228	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGGGGAAATAAAAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	23173304	22827597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_22828192_22852035_22852214_22903737_22903918_22956343_22956628_23045638_23045772_23053871_23053985_23054902_23055015_23085217_23085368_23172835
ENSMUSG00000041926.16_0	chr1	-	2265	11	FSM	ENSMUSG00000041926.16	ENSMUST00000077340.14	2288	11	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAGATAAGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	135211809	135190459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135200099_135200217_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041926.16_1	chr1	-	2161	10	FSM	ENSMUSG00000041926.16	ENSMUST00000074357.8	2171	10	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGTAGATAAGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	135211822	135190459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135190868_135191790_135191934_135192920_135193146_135194607_135194717_135194907_135195021_135195820_135195935_135199266_135199503_135205126_135205276_135206504_135206646_135211299
ENSMUSG00000041935.11_0	chr15	-	5052	6	FSM	ENSMUSG00000041935.11	ENSMUST00000046633.10	5076	6	23	1	-7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTTTCTTACTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4025203	4011517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_4015962_4018072_4018188_4019036_4019169_4021199_4021347_4021839_4021947_4025096
ENSMUSG00000041935.11_3	chr15	-	379	4	FSM	ENSMUSG00000041935.11	ENST00000612065.1	388	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTAATGTGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4025189	4013665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_4013698_4021199_4021347_4021839_4021947_4025096
ENSMUSG00000041935.11_4	chr15	-	287	3	ISM	ENSMUSG00000041935.11	ENST00000612065.1	388	4	3249	2	3249	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTAATGTGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	4021947	4013665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_4013698_4021199_4021347_4021839
ENSMUSG00000041935.11_7	chr15	-	336	3	ISM	ENSMUSG00000041935.11	ENST00000612065.1	388	4	18	7536	18	-7536	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTCTGCATTCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	4025178	4021199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_4021347_4021839_4021947_4025096
ENSMUSG00000041936.19_0	chr4	-	7172	35	FSM	ENSMUSG00000041936.19	ENSMUST00000105574.9	7193	35	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCTTAAAATAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	156270349	156249758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156253189_156253278_156253359_156253553_156253676_156253794_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156270007
ENSMUSG00000041936.19_1	chr4	-	7223	38	FSM	ENSMUSG00000041936.19	ENSMUST00000105575.9	7262	38	27	12	27	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCTTAAAATAGGGACT	NA	NA	NA	NA	NA	NA	NA	NA	156270331	156249758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156251111_156251367_156251472_156251738_156251964_156252233_156252267_156253002_156253027_156253189_156253278_156253359_156253553_156253676_156253794_156254002_156254015_156254226_156254339_156254522_156254688_156254771_156254869_156255035_156255171_156255257_156255488_156255858_156256075_156256244_156256438_156256531_156256880_156257018_156257139_156257224_156257340_156257459_156257588_156257999_156258138_156258241_156258548_156258633_156258740_156258812_156258938_156259027_156259172_156259312_156259478_156259556_156259674_156260675_156260782_156260860_156261010_156261090_156261292_156261412_156261608_156261679_156261899_156262885_156263093_156263239_156263465_156263554_156263780_156263849_156264066_156269544_156269593_156270007
ENSMUSG00000041939.15_0	chr5	+	1037	8	FSM	ENSMUSG00000041939.15	ENSMUST00000137167.8	1049	8	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCAGACCCTGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	114582334	114591204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114582425_114582712_114582751_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940
ENSMUSG00000041939.15_10	chr5	+	1578	10	ISM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	1084	22	1084	-22	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAATAGTACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	114583450	114598630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041939.15_15	chr5	+	746	7	FSM	ENSMUSG00000041939.15	ENST00000392727.7	764	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	5622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCTGCAGCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	114588347	114598202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114588483_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041939.15_4	chr5	+	1642	11	FSM	ENSMUSG00000041939.15	ENSMUST00000043760.15	1660	11	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAGTACAAACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	114582366	114598634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114582425_114583448_114583541_114584219_114584368_114588337_114588483_114588766_114588923_114590425_114590530_114590940_114590987_114593457_114593549_114593950_114594068_114596955_114597110_114598103
ENSMUSG00000041945.13_0	chr1	-	3150	6	FSM	ENSMUSG00000041945.13	ENSMUST00000039672.6	3160	6	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTAACGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40829819	40811203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_40813707_40820540_40820751_40823536_40823667_40825326_40825371_40826689_40826778_40829644
ENSMUSG00000041949.7_0	chr8	+	4403	18	FSM	ENSMUSG00000041949.7	ENSMUST00000048359.5	4409	18	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	107409705	107578071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_107409888_107415283_107415925_107419198_107419316_107422080_107422229_107423235_107423373_107425587_107425751_107426796_107426880_107443240_107443354_107444601_107444779_107447285_107447416_107451725_107451918_107462317_107462453_107468644_107469104_107473925_107473984_107508325_107508467_107533672_107533825_107545087_107545202_107576810
ENSMUSG00000041957.16_0	chr16	+	2898	13	FSM	ENSMUSG00000041957.16	ENSMUST00000039408.3	2918	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGCTTTGTCTGTGACC	NA	NA	NA	NA	NA	NA	NA	NA	16031194	16090569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16031460_16043164_16043278_16043583_16044156_16048504_16048641_16058363_16058572_16064729_16064908_16078189_16078308_16079467_16079633_16080428_16080603_16085040_16085195_16086381_16086572_16087548_16087637_16090032
ENSMUSG00000041958.11_0	chr11	+	2488	12	FSM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGACCATAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	78219246	78233601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78219335_78219557_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUSG00000041958.11_7	chr11	+	2402	11	ISM	ENSMUSG00000041958.11	ENSMUST00000048073.9	2501	12	315	7	315	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGATGACCATAACTCG	NA	NA	NA	NA	NA	NA	NA	NA	78219555	78233601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_78219698_78219800_78219913_78223775_78223866_78224492_78224585_78226252_78226461_78227513_78227657_78228614_78228730_78230168_78230315_78230834_78230936_78232050_78232262_78232559
ENSMUSG00000041959.15_0	chr3	+	675	3	FSM	ENSMUSG00000041959.15	ENSMUST00000045756.14	685	3	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	12901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGACGTAGAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	93462396	93471950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_93462519_93468250_93468403_93471549
ENSMUSG00000041961.15_0	chr11	-	6279	9	FSM	ENSMUSG00000041961.15	ENSMUST00000109867.8	6311	9	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCACATGTGGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	5394821	5226329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5229762_5230807_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5394387
ENSMUSG00000041961.15_1	chr11	-	4922	9	FSM	ENSMUSG00000041961.15	ENSMUST00000172492.8	4926	9	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATATGCTTGAACCACAAG	NA	NA	NA	NA	NA	NA	NA	NA	5331737	5228602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5232506_5233337_5233441_5236093_5236262_5237372_5237484_5239025_5239158_5239662_5239738_5288637_5288764_5320530_5320666_5331568
ENSMUSG00000041966.19_0	chr2	+	7732	14	FSM	ENSMUSG00000041966.19	ENSMUST00000154704.8	7739	14	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAGGTGTGTGTATACAT	NA	NA	NA	NA	NA	NA	NA	NA	70886090	70926198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000041966.19_10	chr2	+	935	8	FSM	ENSMUSG00000041966.19	ENST00000611110.4	947	8	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTTGGTTAAAAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	70905794	70920295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70905881_70908403_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000041966.19_14	chr2	+	851	7	ISM	ENSMUSG00000041966.19	ENST00000611110.4	947	8	2613	6	2613	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTTGGTTAAAAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	70908401	70920295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_70908509_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132
ENSMUSG00000041966.19_4	chr2	+	1894	15	FSM	ENSMUSG00000041966.19	ENSMUST00000064141.12	1905	15	6	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAAGTGGCTTTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	70886130	70929481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690_70918847_70920132_70920278_70929358
ENSMUSG00000041966.19_5	chr2	+	2466	8	FSM	ENSMUSG00000041966.19	ENSMUST00000112159.9	2490	8	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATAGGTATTGCATACT	NA	NA	NA	NA	NA	NA	NA	NA	70886146	70913797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70912254
ENSMUSG00000041966.19_8	chr2	+	1680	13	FSM	ENSMUSG00000041966.19	ENSMUST00000102701.5	1703	13	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAAAATGAGCACTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	70886206	70918976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70886464_70886838_70886943_70890696_70890788_70893702_70893840_70903464_70903544_70905790_70905881_70908403_70908509_70908817_70908924_70912254_70912398_70914768_70914879_70916882_70916971_70917658_70917743_70918690
ENSMUSG00000041974.11_0	chr16	-	3262	20	FSM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAACACTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15964703	15707095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571_15958728_15964608
ENSMUSG00000041974.11_1	chr16	-	3169	19	ISM	ENSMUSG00000041974.11	ENSMUST00000040248.9	3282	20	5986	8	5986	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAAACACTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	15958729	15707095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_15707650_15713006_15713061_15713389_15713505_15715087_15715182_15720772_15720920_15721920_15722126_15730382_15730443_15730532_15730674_15733163_15733252_15754416_15754558_15784465_15784717_15786391_15786582_15855353_15855574_15865867_15865969_15871129_15871381_15932690_15932846_15936670_15936848_15957869_15957937_15958571
ENSMUSG00000041975.18_0	chr2	-	2337	10	FSM	ENSMUSG00000041975.18	ENSMUST00000112186.9	2347	10	6	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGCTTTTGTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	70885921	70794908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_70796024_70796791_70796858_70797393_70797501_70803596_70803737_70806417_70806482_70810720_70810771_70812198_70812540_70823827_70823920_70848563_70848719_70885714
ENSMUSG00000041986.17_0	chr9	-	1712	10	FSM	ENSMUSG00000041986.17	ENST00000443271.2	1731	10	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAATACAGACACATGA	NA	NA	NA	NA	NA	NA	NA	NA	53882452	53819500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53820179_53826876_53827011_53828606_53828658_53831683_53831753_53833249_53833384_53838738_53838869_53841400_53841525_53843013_53843160_53854131_53854234_53882308
ENSMUSG00000041995.9_0	chr13	+	1874	2	FSM	ENSMUSG00000041995.9	ENSMUST00000045909.8	1894	2	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCATCGGTGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95461758	95474343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_95461853_95472563
ENSMUSG00000041995.9_1	chr13	+	1781	1	NIC	ENSMUSG00000041995.9	novel	1945	2	NA	NA	10818	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCATCGGTGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	95472562	95474343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_95472600_95474300
ENSMUSG00000041997.17_0	chr2	-	4258	20	FSM	ENSMUSG00000041997.17	ENSMUST00000038584.9	4280	20	8	14	8	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAAAATGTAAAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	70656064	70542764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_70544510_70546955_70547064_70548125_70548238_70551417_70551554_70551901_70552072_70552250_70552433_70554345_70554428_70555823_70555922_70568764_70568832_70572397_70572587_70575846_70575984_70576277_70576389_70579578_70579672_70580778_70580869_70582578_70582675_70584783_70584831_70587817_70587894_70600347_70600420_70617220_70617340_70655536
ENSMUSG00000042015.18_0	chr13	+	3035	13	NIC	ENSMUSG00000042015.18	novel	3062	14	NA	NA	11	-13	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAACTCATAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	95112866	95159808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136374_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUSG00000042015.18_2	chr13	+	3049	13	NIC	ENSMUSG00000042015.18	novel	3063	13	NA	NA	0	-11	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTCATAGTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	95112855	95159810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_95113098_95114977_95115094_95131757_95131807_95133563_95133694_95136373_95136437_95142238_95142351_95145315_95145379_95146792_95146904_95151538_95151724_95153834_95153957_95154624_95154714_95155339_95155474_95158177
ENSMUSG00000042029.8_0	chr12	+	4664	29	FSM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	0	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGATACAAAAGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116369021	116425211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_116369082_116369321_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ENSMUSG00000042029.8_22	chr12	+	4596	28	ISM	ENSMUSG00000042029.8	ENSMUST00000084828.5	4684	29	310	18	303	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGATACAAAAGAGAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	116369331	116425213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_116369498_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886_116415987_116424183
ENSMUSG00000042029.8_24	chr12	+	3392	26	ISM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	1793	4	1793	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTAAATATGACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	116370821	116415982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886
ENSMUSG00000042029.8_5	chr12	+	3449	27	FSM	ENSMUSG00000042029.8	ENST00000356309.8	3453	27	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTAAATATGACTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	116369028	116415982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_116369082_116370817_116370931_116375994_116376184_116376680_116376796_116378357_116378513_116379044_116379180_116382842_116382938_116384307_116384378_116386815_116386903_116388241_116388335_116389398_116389525_116390195_116390376_116391275_116391429_116393273_116393497_116393714_116393819_116398203_116398378_116401590_116401662_116402217_116402369_116402484_116402659_116403378_116403496_116403579_116403721_116404161_116404262_116406556_116406745_116407920_116408062_116411276_116411381_116413995_116414097_116415886
ENSMUSG00000042032.14_0	chr11	-	2038	7	FSM	ENSMUSG00000042032.14	ENSMUST00000101347.10	2053	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTAACACTTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40586024	40570149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40585629
ENSMUSG00000042032.14_1	chr11	-	1929	7	FSM	ENSMUSG00000042032.14	ENSMUST00000040167.11	1949	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTAACACTTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	40583590	40570149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_40571022_40571482_40571597_40573290_40573485_40575508_40575662_40576053_40576169_40578427_40578623_40583304
ENSMUSG00000042035.12_1	chr3	+	7358	11	FSM	ENSMUSG00000042035.12	ENSMUST00000043983.11	7371	11	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2792	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACTTTTGCCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	101284407	101370371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_101284519_101285121_101285809_101332766_101333145_101334345_101334757_101338519_101338910_101342646_101343049_101346690_101347096_101358199_101358611_101362420_101362829_101364938_101365425_101367102
ENSMUSG00000042042.15_0	chr6	-	3640	8	FSM	ENSMUSG00000042042.15	ENSMUST00000049344.15	3661	8	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGCTAAATGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	118116093	118084425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118086356_118091326_118091409_118096570_118096666_118097905_118098085_118101272_118101375_118103082_118103300_118105655_118106581_118115983
ENSMUSG00000042043.7_0	chr13	+	424	4	FSM	ENSMUSG00000042043.7	ENST00000522370.1	436	4	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGATGTTTTTTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	94822437	94979249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94822577_94968867_94968974_94973615_94973703_94979157
ENSMUSG00000042043.7_10	chr13	+	460	3	ISM	ENSMUSG00000042043.7	ENSMUST00000220825.2	497	4	14625	-15	14625	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTACCAAATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	94968866	94979423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_94968974_94973615_94973703_94979157
ENSMUSG00000042043.7_3	chr13	+	545	4	FSM	ENSMUSG00000042043.7	ENSMUST00000046644.7	559	4	7	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTTACCAAATTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	94925424	94979423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94925511_94968867_94968974_94973615_94973703_94979157
ENSMUSG00000042043.7_4	chr13	+	428	3	FSM	ENSMUSG00000042043.7	ENST00000520361.5	439	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTAATAAAATTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	94925432	94979401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94925511_94968867_94968974_94979157
ENSMUSG00000042043.7_6	chr13	+	512	4	FSM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGTCAAATAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	94925453	94979379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94925511_94968867_94968974_94973575_94973703_94979157
ENSMUSG00000042043.7_9	chr13	+	453	3	ISM	ENSMUSG00000042043.7	ENST00000518338.6	519	4	43416	7	14628	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTGTCAAATAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	94968869	94979379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_94968974_94973575_94973703_94979157
ENSMUSG00000042046.16_0	chr1	+	6273	13	FSM	ENSMUSG00000042046.16	ENSMUST00000045110.14	6282	13	3	6	3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTCCAGCGTTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	132345295	132394690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132345609_132361836_132362226_132377049_132377714_132380824_132381058_132381798_132381883_132382969_132383147_132383597_132383728_132384062_132384220_132384606_132384740_132386054_132386169_132387613_132387729_132390650_132390786_132391061
ENSMUSG00000042050.9_1	chr12	-	3705	22	FSM	ENSMUSG00000042050.9	ENSMUST00000039349.8	3721	22	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGAATAATAGGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	116226631	116170675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_116171404_116175344_116175569_116176993_116177126_116177301_116177402_116180100_116180162_116181723_116181776_116182236_116182299_116182400_116182515_116188506_116188670_116189584_116189758_116193200_116193331_116195308_116195398_116196214_116196327_116196936_116197067_116205298_116205402_116209624_116209842_116210319_116210398_116211614_116211924_116218024_116218117_116219450_116219872_116221040_116221095_116226470
ENSMUSG00000042055.14_0	chr7	+	4537	29	FSM	ENSMUSG00000042055.14	ENSMUST00000084519.7	4550	29	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGACTTTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129193591	129237454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235454_129236541
ENSMUSG00000042055.14_1	chr7	+	4538	29	NNC	ENSMUSG00000042055.14	novel	4550	29	NA	NA	3	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGACTTTGTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129193589	129237454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_129193788_129194699_129194812_129200748_129200903_129202160_129202335_129204722_129204910_129206801_129206968_129207418_129207534_129208240_129208437_129208720_129208822_129209484_129209662_129210565_129210651_129215590_129215698_129218317_129218394_129220349_129220459_129221617_129221743_129222069_129222218_129225974_129226082_129226428_129226544_129226879_129227052_129229728_129229838_129230717_129230781_129231641_129231708_129232343_129232522_129232897_129232994_129233431_129233598_129234047_129234146_129234433_129234580_129235373_129235455_129236543
ENSMUSG00000042063.12_0	chr12	+	1936	3	FSM	ENSMUSG00000042063.12	ENSMUST00000073551.6	1958	3	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTCAAAAACTTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	116011359	116024206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_116011487_116018341_116018469_116022524
ENSMUSG00000042063.12_2	chr12	+	4768	3	FSM	ENSMUSG00000042063.12	ENSMUST00000183125.2	4779	3	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAGATTTGTTCCTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116011398	116026972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_116011487_116018341_116018574_116022524
ENSMUSG00000042066.17_0	chr1	-	3275	5	FSM	ENSMUSG00000042066.17	ENST00000545499.5	3286	5	6	5	6	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCATCCTGTCTGAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	132318554	132284058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132308394_132308920_132318378
ENSMUSG00000042066.17_8	chr1	-	1453	4	FSM	ENSMUSG00000042066.17	ENST00000637895.1	1459	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGAGCGGCTGCCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	132304475	132285249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132285556_132286640_132286777_132288012_132288954_132304405
ENSMUSG00000042073.16_0	chr9	+	1736	4	FSM	ENSMUSG00000042073.16	ENSMUST00000048527.15	1745	4	1	8	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTCACATGCTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	106325574	106330114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106325909_106327202_106327431_106328591_106328834_106329182
ENSMUSG00000042073.16_1	chr9	+	1618	3	FSM	ENSMUSG00000042073.16	ENSMUST00000213179.2	1627	3	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGACCTCACATGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106326983	106330111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106327431_106328591_106328834_106329182
ENSMUSG00000042079.14_0	chr6	+	2253	4	FSM	ENSMUSG00000042079.14	ENSMUST00000167182.8	2271	4	12	6	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGACTGGCACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117877312	117902576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117877468_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_3	chr6	+	2143	4	FSM	ENSMUSG00000042079.14	ENSMUST00000035493.14	2147	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGACTGGCACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117883755	117902576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117883801_117894430_117894560_117896059_117896121_117900668
ENSMUSG00000042079.14_7	chr6	+	2388	3	FSM	ENSMUSG00000042079.14	ENSMUST00000163168.9	2401	3	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGACTGGCACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117883818	117902576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117884170_117894430_117894560_117900668
ENSMUSG00000042079.14_9	chr6	+	2181	3	FSM	ENSMUSG00000042079.14	ENSMUST00000180020.8	2280	3	93	6	93	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGACTGGCACAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	117894347	117902576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117894560_117896059_117896121_117900668
ENSMUSG00000042082.8_0	chr13	+	4026	8	FSM	ENSMUSG00000042082.8	ENSMUST00000091403.6	4038	8	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGTCAGCCTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	93908142	94079517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_93908601_93926546_93926734_93930535_93930727_93944003_93944212_93998594_93998839_94016995_94017067_94075734_94075858_94076973
ENSMUSG00000042097.18_0	chr6	+	2794	4	FSM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGACCGTCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	117840047	117849718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117840104_117843355_117843536_117846178_117846235_117847216
ENSMUSG00000042097.18_1	chr6	+	2737	3	ISM	ENSMUSG00000042097.18	ENSMUST00000172088.8	2812	4	3319	8	3319	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTGACCGTCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	117843356	117849718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_117843536_117846178_117846235_117847216
ENSMUSG00000042099.17_0	chr17	+	2635	11	FSM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	0	6	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34029493	34041886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34029540_34035159_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_2	chr17	+	2641	11	FSM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTACTAAGTTCGTATT	NA	NA	NA	NA	NA	NA	NA	NA	34029499	34041880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34029540_34035159_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_3	chr17	+	778	6	FSM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34029496	34041886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34029540_34035159_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_5	chr17	+	2586	10	ISM	ENSMUSG00000042099.17	ENSMUST00000048560.11	2641	11	5669	6	5666	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34035162	34041886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34035220_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_6	chr17	+	728	5	ISM	ENSMUSG00000042099.17	ENSMUST00000173789.2	783	6	5670	5	5670	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34035166	34041886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34035220_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_7	chr17	+	2604	10	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	5665	3	5665	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAAGTTCGTATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	34035161	34041885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34035238_34036167_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042099.17_8	chr17	+	2530	9	ISM	ENSMUSG00000042099.17	ENSMUST00000172649.8	2652	11	6670	2	6670	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAAGTTCGTATTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	34036166	34041886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34037419_34037499_34037600_34037773_34037972_34038065_34038154_34038753_34038971_34040742_34040889_34040979_34041181_34041259_34041350_34041648
ENSMUSG00000042104.19_25	chr14	-	4525	38	ISM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	10	8062	10	-8062	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGAGTGAGTGCTTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	119336792	119232363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_42	chr14	-	935	8	FSM	ENSMUSG00000042104.19	ENST00000376714.7	952	8	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAGGTATGTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	119336794	119315072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_119315164_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042104.19_6	chr14	-	4541	39	FSM	ENSMUSG00000042104.19	ENST00000376747.8	4559	39	15	3	15	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGCGGGTCCAGAAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	119336787	119224304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_119224326_119232363_119232485_119235508_119235626_119239182_119239298_119240237_119240399_119244556_119244740_119245474_119245560_119246410_119246507_119250887_119250971_119251934_119252020_119256229_119256316_119256878_119257038_119263833_119264024_119266374_119266455_119269605_119269709_119272253_119272350_119273381_119273507_119278904_119279037_119280007_119280215_119281911_119282004_119286592_119286692_119286772_119286897_119287047_119287213_119292015_119292148_119294974_119295111_119295606_119295693_119296432_119296553_119298651_119298803_119308222_119308315_119312742_119312804_119315063_119315164_119319116_119319218_119321266_119321340_119323549_119323647_119326576_119326752_119328062_119328176_119328605_119328737_119332718_119332802_119336622
ENSMUSG00000042105.19_0	chr7	+	4702	20	FSM	ENSMUSG00000042105.19	ENSMUST00000043138.13	4734	20	20	12	20	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATTAAAAACTGAATGC	NA	NA	NA	NA	NA	NA	NA	NA	128213103	128298137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265361_128265491_128265700_128265869_128265972_128266030_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042105.19_15	chr7	+	1992	6	FSM	ENSMUSG00000042105.19	ENST00000637174.1	2011	6	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACACTAGAATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	128290750	128297255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_128290971_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295461_128295850
ENSMUSG00000042105.19_6	chr7	+	3427	18	FSM	ENSMUSG00000042105.19	ENST00000648262.1	3445	18	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACACTAGAATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	128213310	128297255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_128213416_128237881_128237963_128260739_128260877_128265700_128265869_128269320_128269520_128270137_128270318_128271654_128271723_128277021_128277147_128278452_128278531_128279720_128279842_128281440_128281570_128283971_128284090_128286809_128287009_128292350_128292423_128293475_128293550_128293977_128294107_128295368_128295457_128295899
ENSMUSG00000042106.6_0	chr9	-	1020	2	FSM	ENSMUSG00000042106.6	ENSMUST00000048568.6	1025	2	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGCTGGTCCCATACTC	NA	NA	NA	NA	NA	NA	NA	NA	107863076	107861424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107862264_107862895
ENSMUSG00000042109.9_0	chr15	+	2482	4	FSM	ENSMUSG00000042109.9	ENSMUST00000038757.8	2490	4	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCCTGTCTTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	81820966	81835141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81821189_81830831_81831134_81832774_81832898_81833306
ENSMUSG00000042111.10_0	chr1	-	1688	5	FSM	ENSMUSG00000042111.10	ENSMUST00000042493.10	1705	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTCACAGAGCTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	34478744	34475758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_34476692_34476807_34476940_34477930_34478014_34478123_34478228_34478308
ENSMUSG00000042115.5_0	chr1	+	4251	5	FSM	ENSMUSG00000042115.5	ENSMUST00000046071.5	4269	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGTGGAAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	132226374	132235088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132227391_132230262_132230428_132230677_132230894_132231466_132231569_132232336
ENSMUSG00000042116.4_0	chr4	-	3598	4	FSM	ENSMUSG00000042116.4	ENSMUST00000042196.4	3623	4	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAACCAAAAAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	155859147	155852622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155855123_155855201_155855481_155857165_155857724_155858886
ENSMUSG00000042116.4_1	chr4	-	791	2	FSM	ENSMUSG00000042116.4	ENST00000338660.5	794	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGCCTCTGGCGCGCGGAC	NA	NA	NA	NA	NA	NA	NA	NA	155857329	155854853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155855481_155857165
ENSMUSG00000042118.8_0	chr13	-	800	5	FSM	ENSMUSG00000042118.8	ENST00000521567.1	809	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCTGTCTTCAGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	93805849	93793499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181_93800330_93805762
ENSMUSG00000042118.8_1	chr13	-	707	4	ISM	ENSMUSG00000042118.8	ENST00000521567.1	809	5	5527	8	5527	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTTCTTGCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	93800331	93793507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_93793653_93798809_93799039_93799653_93799837_93800181
ENSMUSG00000042121.17_0	chr5	-	8414	15	FSM	ENSMUSG00000042121.17	ENSMUST00000159592.8	8436	15	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATGTCCTGTGTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	114131941	114075162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114098660_114098727_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ENSMUSG00000042121.17_1	chr5	-	5563	14	FSM	ENSMUSG00000042121.17	ENSMUST00000112298.10	5584	14	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACAAAAGCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114131828	114077834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114081527_114084336_114084890_114088446_114088648_114089939_114090087_114091313_114091361_114093778_114093908_114095444_114095539_114096774_114096970_114099410_114099480_114104240_114104363_114104769_114104835_114108431_114108536_114127706_114127748_114131724
ENSMUSG00000042133.17_0	chr2	+	6105	14	FSM	ENSMUSG00000042133.17	ENSMUST00000090858.10	6127	14	8	14	8	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAATAAACAATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	69553156	69584342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69553302_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUSG00000042133.17_14	chr2	+	6225	14	FSM	ENSMUSG00000042133.17	ENSMUST00000040915.15	6245	14	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTACAATAAACAATTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	69553442	69584342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69553708_69562089_69562158_69562540_69562619_69562723_69562799_69563161_69563270_69563532_69563578_69564634_69564723_69566211_69566242_69566332_69566473_69571829_69572038_69573956_69574125_69576371_69576460_69579304_69579442_69579615
ENSMUSG00000042138.10_0	chr9	+	2455	4	FSM	ENSMUSG00000042138.10	ENST00000239614.8	2442	4	-13	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGGGTGTGCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	37400326	37435476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37401130_37428668_37428769_37430022_37430084_37433985
ENSMUSG00000042138.10_1	chr9	+	2152	4	FSM	ENSMUSG00000042138.10	ENSMUST00000211060.2	2165	4	4	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATGCCTTTGAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	37400618	37435912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37400683_37428668_37428769_37430022_37430084_37433985
ENSMUSG00000042148.9_0	chr11	-	2885	7	FSM	ENSMUSG00000042148.9	ENSMUST00000049091.9	2915	7	14	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAGTTAAAAGAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	63970278	63853468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_63855355_63867069_63867303_63884711_63884783_63936052_63936178_63962343_63962663_63964362_63964497_63970161
ENSMUSG00000042148.9_5	chr11	-	590	3	FSM	ENSMUSG00000042148.9	ENST00000429152.6	598	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATACTTTTTAAAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	63970281	63962331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_63962663_63964362_63964497_63970156
ENSMUSG00000042155.4_0	chr2	+	4582	4	FSM	ENSMUSG00000042155.4	ENSMUST00000053087.4	4617	4	27	8	27	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCGATGTGTCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	69652740	69666987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69652987_69654130_69655345_69659189_69659343_69664018
ENSMUSG00000042156.17_0	chr14	-	4468	20	FSM	ENSMUSG00000042156.17	ENSMUST00000047208.12	4476	20	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTTTTAATTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119160578	119112938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322
ENSMUSG00000042156.17_1	chr14	-	4046	22	FSM	ENSMUSG00000042156.17	ENSMUST00000004055.10	4079	22	27	6	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACACTGCGACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	119162772	119113675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_119114675_119116755_119116925_119118421_119118553_119120776_119120980_119123017_119123072_119123909_119124040_119124479_119124643_119126667_119126805_119129181_119129245_119133262_119133320_119137397_119137455_119138912_119138962_119139426_119139568_119144306_119144370_119146845_119146984_119148753_119148916_119149853_119149979_119152601_119152687_119159654_119160204_119160322_119160580_119161836_119161931_119162552
ENSMUSG00000042165.9_0	chr3	-	1345	1	FSM	ENSMUSG00000042165.9	ENSMUST00000192538.2	1392	1	6	41	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTGTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92336724	92335379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92335400_92336700
ENSMUSG00000042167.7_0	chr13	-	3063	15	FSM	ENSMUSG00000042167.7	ENSMUST00000225868.2	3081	15	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACATTGTTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	93328882	93282796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311215_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUSG00000042167.7_1	chr13	-	2962	15	FSM	ENSMUSG00000042167.7	ENSMUST00000048702.7	2990	15	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGACATTGTTGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	93328769	93282796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_93284174_93285388_93285469_93287191_93287284_93291432_93291570_93296152_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311227_93312026_93312119_93312205_93312321_93320586_93320825_93322315_93322406_93322810_93322985_93328601
ENSMUSG00000042178.7_0	chr7	+	3817	6	FSM	ENSMUSG00000042178.7	ENSMUST00000044660.6	3834	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTGCTGCTGTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	127836538	127844265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127837762_127839053_127839162_127839254_127840042_127841351_127841849_127842511_127842645_127843196
ENSMUSG00000042179.7_0	chr19	+	1284	10	FSM	ENSMUSG00000042179.7	ENST00000534537.5	1301	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGTACGTATCTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	58718414	58729683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_58718564_58718906_58719033_58720455_58720595_58721787_58721897_58723074_58723195_58723304_58723425_58725422_58725542_58726577_58726708_58728877_58728987_58729520
ENSMUSG00000042182.17_0	chr1	-	2468	7	FSM	ENSMUSG00000042182.17	ENSMUST00000062289.11	2487	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAAACTAATGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	33946890	33891144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_33892449_33901734_33901855_33902822_33903016_33903603_33903825_33917340_33917519_33922521_33922730_33946646
ENSMUSG00000042185.15_0	chr9	+	5143	26	FSM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTAATTTCTGGGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	31297497	31332621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_31297567_31300172_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ENSMUSG00000042185.15_3	chr9	+	5082	25	ISM	ENSMUSG00000042185.15	ENSMUST00000086167.12	5161	26	2683	2	2683	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTGGGCCTTTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	31300170	31332627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_31300346_31303258_31303461_31305998_31306127_31307618_31307794_31308331_31308434_31309015_31309090_31309855_31309941_31310444_31310626_31311234_31311344_31311872_31312000_31312233_31312300_31313351_31313432_31313530_31313575_31314309_31314371_31314750_31314926_31316846_31316954_31320568_31320693_31321140_31321221_31321359_31321575_31321662_31321934_31322472_31322686_31325312_31326081_31330271_31330379_31331109_31331246_31331350
ENSMUSG00000042190.13_0	chr5	-	2863	3	FSM	ENSMUSG00000042190.13	ENSMUST00000047936.13	2882	3	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCTTGCTTGTTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	113788469	113750415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113753002_113754588_113754678_113788281
ENSMUSG00000042195.10_1	chr9	+	1479	8	FSM	ENSMUSG00000042195.10	ENST00000525071.5	1502	8	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAGAGCAGAGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	53678881	53724426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_53679179_53705121_53705298_53708294_53708423_53713901_53714062_53715329_53715487_53716969_53717023_53718158_53718314_53724073
ENSMUSG00000042197.14_0	chr1	-	3936	15	FSM	ENSMUSG00000042197.14	ENSMUST00000019861.13	3958	15	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTAAAGCAACTAAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	33853598	33800637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_33801291_33804924_33804991_33808801_33808989_33809849_33809981_33811973_33812115_33815349_33816945_33818124_33818273_33818976_33819131_33821148_33821276_33822121_33822273_33822933_33823046_33825487_33825614_33844419_33844501_33852807_33852892_33853418
ENSMUSG00000042198.13_0	chr4	+	515	5	FSM	ENSMUSG00000042198.13	ENSMUST00000108386.8	524	5	2	7	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTTGAAACATGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	3938889	3943516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3938963_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042198.13_1	chr4	+	604	5	FSM	ENSMUSG00000042198.13	ENSMUST00000121651.8	620	5	10	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGAAACATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3938923	3943515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3939132_3939423_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042198.13_11	chr4	+	681	3	FSM	ENSMUSG00000042198.13	ENSMUST00000119403.2	695	3	4	10	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTGAAACATGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3940857	3943515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3941312_3942720_3942820_3943387
ENSMUSG00000042198.13_13	chr4	+	213	2	FSM	ENSMUSG00000042198.13	ENST00000519367.1	213	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCAACTTCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	3941240	3942819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3941312_3942677
ENSMUSG00000042198.13_14	chr4	+	140	1	NIC	ENSMUSG00000042198.13	novel	524	5	NA	NA	1439	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCCAACTTCTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	3942679	3942819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_+_3942700_3942800
ENSMUSG00000042198.13_4	chr4	+	654	5	FSM	ENSMUSG00000042198.13	ENSMUST00000041122.11	672	5	7	11	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGAAACATGTTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	3938920	3943517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3939132_3939378_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042198.13_7	chr4	+	827	4	FSM	ENSMUSG00000042198.13	ENSMUST00000119307.8	889	4	58	4	58	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATTGTTTCTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	3938977	3943500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3939527_3941245_3941312_3942720_3942820_3943387
ENSMUSG00000042202.16_2	chr4	+	642	4	FSM	ENSMUSG00000042202.16	ENST00000643943.1	655	4	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGAGTGGAACATTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	155694542	155702215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155694777_155694957_155695094_155696072_155696201_155702071
ENSMUSG00000042203.9_0	chr17	+	3586	13	FSM	ENSMUSG00000042203.9	ENSMUST00000048677.9	3595	13	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGGGCTTTGGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	29768767	29825869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29768969_29783405_29783463_29787365_29787674_29789560_29789741_29790638_29790710_29791943_29792073_29794129_29794196_29797802_29797918_29813650_29813758_29814821_29814898_29818812_29818941_29819119_29819216_29823817
ENSMUSG00000042207.18_0	chr1	+	6027	27	FSM	ENSMUSG00000042207.18	ENST00000367264.7	6038	27	11	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGTGGTCCATCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	134487917	134560258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521289_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_14	chr1	+	8686	27	FSM	ENSMUSG00000042207.18	ENSMUST00000047714.14	8714	27	19	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTAAGCAAAACGCAATG	NA	NA	NA	NA	NA	NA	NA	NA	134487927	134563014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134488281_134512891_134512970_134515659_134515783_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042207.18_18	chr1	+	5370	26	FSM	ENSMUSG00000042207.18	ENST00000648469.1	5383	26	13	0	-4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCTACTCAGTCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	134487925	134559819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134488281_134512891_134512970_134516514_134516686_134521066_134521202_134523537_134523635_134525320_134525431_134526797_134526957_134528371_134528492_134530187_134530347_134532179_134532362_134533450_134533614_134535425_134535546_134536602_134536798_134540925_134541108_134541624_134541750_134543655_134543807_134543926_134544042_134545429_134545786_134547297_134547437_134548580_134548761_134549672_134549832_134552448_134552935_134555002_134555115_134556335_134556491_134558170_134558492_134558974
ENSMUSG00000042208.16_0	chr11	-	4116	22	FSM	ENSMUSG00000042208.16	ENSMUST00000180260.8	4128	22	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAAAATTGTGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	23583623	23523791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579032_23581204_23581335_23583492
ENSMUSG00000042208.16_15	chr11	-	3620	19	FSM	ENSMUSG00000042208.16	ENSMUST00000093267.11	3646	19	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAATGTGCTTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	23579009	23523910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23574935_23575123_23578872
ENSMUSG00000042208.16_4	chr11	-	4091	21	FSM	ENSMUSG00000042208.16	ENSMUST00000109532.9	4106	21	4	11	4	-11	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGCAATGACAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	23583635	23523798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23525518_23526730_23526823_23531595_23531685_23532866_23532941_23533097_23533127_23534519_23534612_23538634_23538735_23539950_23539984_23543425_23543526_23545380_23545527_23556613_23556767_23559000_23559125_23561746_23561858_23561961_23562049_23565095_23565257_23567137_23567197_23570228_23570468_23572435_23572530_23574935_23575123_23578872_23579120_23583480
ENSMUSG00000042210.18_0	chr9	-	1240	7	FSM	ENSMUSG00000042210.18	ENSMUST00000048685.13	1256	7	13	3	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGACGTTGTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106324864	106317252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106317604_106317819_106318056_106321025_106321142_106321288_106321506_106322724_106322851_106322969_106323029_106324729
ENSMUSG00000042210.18_3	chr9	-	537	2	FSM	ENSMUSG00000042210.18	ENST00000491470.1	546	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTGACGTTGTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	106321474	106317252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106317604_106321288
ENSMUSG00000042211.8_0	chr18	-	3469	20	FSM	ENSMUSG00000042211.8	ENST00000513826.1	3483	20	4	10	4	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAAACTATTCTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	62674083	62637142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951
ENSMUSG00000042211.8_19	chr18	-	4238	22	FSM	ENSMUSG00000042211.8	ENSMUST00000048688.8	4254	22	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCAAATAGAGAGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	62681759	62637234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62647865_62648616_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681682
ENSMUSG00000042211.8_8	chr18	-	3580	21	FSM	ENSMUSG00000042211.8	ENST00000296701.10	3600	21	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACATAAAAATAAACACTTA	NA	NA	NA	NA	NA	NA	NA	NA	62681815	62637161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_62637952_62638545_62638660_62639008_62639113_62639674_62639821_62640904_62641072_62643780_62643884_62644084_62644186_62650034_62650215_62651562_62651683_62652824_62653039_62653753_62653897_62655420_62655592_62659202_62659334_62660247_62660342_62662622_62662761_62663759_62663898_62666579_62666746_62666971_62667136_62669186_62669321_62673951_62674118_62681719
ENSMUSG00000042213.18_0	chr6	+	3192	12	FSM	ENSMUSG00000042213.18	ENSMUST00000112900.9	3220	12	22	6	-19	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCACTATGACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	116241204	116307253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265121_116270731_116270769_116279351_116279381_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ENSMUSG00000042213.18_1	chr6	+	3112	10	FSM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	4	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCACTATGACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	116241227	116307253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116241274_116250533_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ENSMUSG00000042213.18_5	chr6	+	3059	9	ISM	ENSMUSG00000042213.18	ENSMUST00000036503.14	3123	10	9317	7	9315	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCACTATGACTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	116250540	116307253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_116250834_116261700_116261777_116262814_116262883_116264942_116265130_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ENSMUSG00000042213.18_6	chr6	+	3116	11	ISM	ENSMUSG00000042213.18	ENSMUST00000112900.9	3220	12	9351	13	9308	-13	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTCAACTTCACTATGA	NA	NA	NA	NA	NA	NA	NA	NA	116250533	116307246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_116250834_116261700_116261777_116262814_116262883_116264942_116265121_116270731_116270769_116279351_116279381_116282577_116282723_116290805_116291979_116292548_116292604_116305167_116305286_116306309
ENSMUSG00000042215.9_0	chr1	-	1847	3	FSM	ENSMUSG00000042215.9	ENSMUST00000044691.9	1860	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCTAGCATTGGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	33796865	33784566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_33786098_33787297_33787408_33796659
ENSMUSG00000042216.14_1	chr5	-	3565	24	FSM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGATATCCCCCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	113436763	113392687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090_113435254_113436689
ENSMUSG00000042216.14_2	chr5	-	3495	23	ISM	ENSMUSG00000042216.14	ENST00000400359.4	3573	24	1514	0	1514	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATCCCCCTTTCTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	113435253	113392683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_113392960_113398738_113398907_113400863_113400961_113403117_113403228_113406656_113406740_113407914_113408040_113411114_113411703_113413744_113413814_113414152_113414336_113416566_113416696_113421444_113421591_113422157_113422223_113423899_113424039_113425374_113425540_113426998_113427132_113427322_113427487_113428192_113428261_113430457_113430583_113432845_113432978_113433144_113433291_113433492_113433561_113434640_113434794_113435090
ENSMUSG00000042225.4_0	chrX	-	5415	6	FSM	ENSMUSG00000042225.4	ENSMUST00000041317.3	5437	6	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAAAAATGAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	141749716	141634155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_141638644_141640471_141640569_141641876_141641968_141661105_141661221_141695168_141695280_141749203
ENSMUSG00000042228.15_0	chr4	+	3444	13	FSM	ENSMUSG00000042228.15	ENSMUST00000041377.13	3463	13	10	9	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCATTTCCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3678124	3791604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3678365_3738724_3738862_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042228.15_1	chr4	+	3369	13	FSM	ENSMUSG00000042228.15	ENSMUST00000103010.4	3387	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCATTTCCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	3678136	3791604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_3678365_3738724_3738799_3742441_3742488_3743196_3743303_3745317_3745417_3745522_3745627_3746710_3746861_3748660_3748814_3756300_3756484_3758245_3758323_3780912_3781067_3782972_3783105_3789741
ENSMUSG00000042229.10_0	chr1	+	2848	2	FSM	ENSMUSG00000042229.10	ENSMUST00000047978.9	2861	2	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGGGCTGGCGAGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	134422396	134436510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134422548_134433813
ENSMUSG00000042246.6_0	chr7	-	4534	16	FSM	ENSMUSG00000042246.6	ENSMUST00000044195.6	4546	16	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGCTATATATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	118183959	118135075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118137441_118138637_118138717_118141108_118141265_118142521_118142653_118144824_118145012_118146539_118146638_118146826_118146945_118149157_118149316_118150358_118150533_118151920_118152069_118155045_118155192_118158078_118158162_118160213_118160382_118163439_118163589_118165407_118165649_118183826
ENSMUSG00000042254.15_0	chr9	+	4149	10	FSM	ENSMUSG00000042254.15	ENSMUST00000048762.8	4153	10	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAAATGCAATTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	65172461	65187883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65172506_65173094_65173133_65174323_65174475_65176806_65176900_65177412_65177683_65180084_65180265_65180790_65181106_65181811_65181921_65183125_65183284_65185092
ENSMUSG00000042254.15_1	chr9	+	4092	9	ISM	ENSMUSG00000042254.15	ENSMUST00000048762.8	4153	10	646	4	646	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAAATGCAATTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	65173107	65187883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_65173133_65174323_65174475_65176806_65176900_65177412_65177683_65180084_65180265_65180790_65181106_65181811_65181921_65183125_65183284_65185092
ENSMUSG00000042254.15_2	chr9	+	4069	8	ISM	ENSMUSG00000042254.15	ENSMUST00000048762.8	4153	10	1860	4	1860	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTGAAATGCAATTAACAT	NA	NA	NA	NA	NA	NA	NA	NA	65174321	65187883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_65174475_65176806_65176900_65177412_65177683_65180084_65180265_65180790_65181106_65181811_65181921_65183125_65183284_65185092
ENSMUSG00000042271.14_0	chrX	+	2520	5	FSM	ENSMUSG00000042271.14	ENSMUST00000112916.9	2532	5	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCACAAGTTTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	141009767	141022678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141009928_141011286_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUSG00000042271.14_1	chrX	+	2473	4	FSM	ENSMUSG00000042271.14	ENSMUST00000112914.8	2484	4	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCACAAGTTTTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	141011173	141022678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141011378_141012519_141012607_141019779_141019925_141020641
ENSMUSG00000042272.18_0	chr2	-	8972	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATCTAGGGGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	77096104	77010693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77096019
ENSMUSG00000042272.18_1	chr2	-	2678	17	ISM	ENSMUSG00000042272.18	ENSMUST00000102660.8	8990	18	20683	6218	20683	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTTATTTAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	77075429	77016901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360
ENSMUSG00000042272.18_17	chr2	-	2717	18	FSM	ENSMUSG00000042272.18	ENSMUST00000102659.2	2720	18	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATCTTATTTAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	77110936	77016901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110898
ENSMUSG00000042272.18_8	chr2	-	3500	18	FSM	ENSMUSG00000042272.18	ENST00000428443.8	3522	18	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTTTAAGGTGAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	77111163	77016349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_77017605_77018843_77018966_77021304_77021497_77022042_77022166_77022842_77022925_77027166_77027327_77028632_77028748_77029209_77029405_77036549_77036673_77042703_77042916_77045405_77045462_77047266_77047365_77048432_77048547_77061007_77061122_77064992_77065084_77071956_77072066_77075360_77075431_77110894
ENSMUSG00000042275.10_0	chr13	-	1585	2	FSM	ENSMUSG00000042275.10	ENSMUST00000109226.5	1600	2	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTCTAGTTCGAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	115226708	115224891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_115225498_115225729
ENSMUSG00000042284.11_0	chr13	-	10958	29	FSM	ENSMUSG00000042284.11	ENSMUST00000061673.9	10967	29	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGTGTGGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	115238495	115089635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_115096671_115102133_115102251_115103051_115103145_115104739_115104845_115104992_115105098_115107014_115107129_115110628_115110732_115112133_115112224_115114135_115114213_115117308_115117390_115119267_115119478_115121607_115121719_115122665_115122803_115124138_115124306_115126595_115126727_115128802_115129061_115130329_115130474_115133456_115133600_115138074_115138220_115138785_115138860_115143439_115143606_115148695_115148847_115152647_115152797_115166571_115166700_115167418_115167531_115167640_115167730_115171808_115171922_115185818_115185940_115238006
ENSMUSG00000042286.14_0	chr14	-	7566	66	FSM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCAAGAAAGGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	30885380	30860980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30861161_30861253_30861371_30861463_30861611_30861700_30861806_30861882_30862033_30862104_30862225_30862312_30862423_30862511_30862678_30862765_30862900_30862987_30863133_30863219_30863414_30863489_30863598_30863745_30863851_30863928_30864079_30864625_30864825_30864914_30864972_30865074_30865225_30865313_30865401_30865471_30865649_30867031_30867092_30867180_30867322_30867731_30867879_30867982_30868061_30868254_30868303_30868623_30868747_30868982_30869058_30869160_30869235_30869443_30869570_30869684_30869793_30869970_30870071_30870179_30870376_30870896_30870981_30871345_30871403_30871747_30871877_30872104_30872237_30872360_30872460_30872578_30872678_30872755_30872834_30873125_30873238_30873406_30873538_30873640_30873689_30873814_30873911_30874520_30874617_30876297_30876457_30876581_30876676_30876785_30876973_30877685_30877798_30878936_30879024_30879327_30879424_30879641_30879705_30880798_30880958_30881195_30881277_30881453_30881508_30881591_30881706_30881958_30882022_30882172_30882311_30882452_30882588_30882753_30882849_30883035_30883164_30883295_30883427_30883661_30883859_30884067_30884179_30884405_30884502_30884863_30884934_30884998_30885085_30885308
ENSMUSG00000042286.14_1	chr14	-	7497	65	ISM	ENSMUSG00000042286.14	ENST00000321725.10	7577	66	299	5	299	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGAAAGGGTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	30885085	30860978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_30861161_30861253_30861371_30861463_30861611_30861700_30861806_30861882_30862033_30862104_30862225_30862312_30862423_30862511_30862678_30862765_30862900_30862987_30863133_30863219_30863414_30863489_30863598_30863745_30863851_30863928_30864079_30864625_30864825_30864914_30864972_30865074_30865225_30865313_30865401_30865471_30865649_30867031_30867092_30867180_30867322_30867731_30867879_30867982_30868061_30868254_30868303_30868623_30868747_30868982_30869058_30869160_30869235_30869443_30869570_30869684_30869793_30869970_30870071_30870179_30870376_30870896_30870981_30871345_30871403_30871747_30871877_30872104_30872237_30872360_30872460_30872578_30872678_30872755_30872834_30873125_30873238_30873406_30873538_30873640_30873689_30873814_30873911_30874520_30874617_30876297_30876457_30876581_30876676_30876785_30876973_30877685_30877798_30878936_30879024_30879327_30879424_30879641_30879705_30880798_30880958_30881195_30881277_30881453_30881508_30881591_30881706_30881958_30882022_30882172_30882311_30882452_30882588_30882753_30882849_30883035_30883164_30883295_30883427_30883661_30883859_30884067_30884179_30884405_30884502_30884863_30884934_30884998
ENSMUSG00000042289.12_0	chr7	+	1816	7	FSM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	8	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	127399783	127402970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000042289.12_1	chr7	+	1709	7	FSM	ENSMUSG00000042289.12	ENSMUST00000106272.8	1725	7	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	127399797	127402970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127399887_127400246_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401500_127401571_127401957
ENSMUSG00000042292.19_0	chr15	-	4379	15	FSM	ENSMUSG00000042292.19	ENSMUST00000134469.9	4392	15	11	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGTTGTATTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	81074923	80896483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81040944_81040995_81074707
ENSMUSG00000042292.19_1	chr15	-	4355	14	FSM	ENSMUSG00000042292.19	ENSMUST00000239114.2	4366	14	4	7	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCAGTCTGTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	81074954	80896488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81074707
ENSMUSG00000042292.19_3	chr15	-	4106	13	FSM	ENSMUSG00000042292.19	ENSMUST00000109579.9	4154	13	30	18	30	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACAAAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	80989254	80896509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904365_80904516_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_80988973
ENSMUSG00000042292.19_4	chr15	-	4177	14	FSM	ENSMUSG00000042292.19	ENSMUST00000131235.9	4222	14	27	18	27	-18	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAACAAAAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	81074897	80896509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80898004_80899549_80899611_80899959_80900113_80900431_80901428_80902151_80902321_80902414_80902681_80904953_80905130_80906597_80906760_80907742_80907819_80910862_80910919_80929489_80929556_81001591_81001854_81040944_81040995_81074707
ENSMUSG00000042293.9_0	chr9	+	518	1	FSM	ENSMUSG00000042293.9	ENSMUST00000048824.9	531	1	5	8	5	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATGTCTTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	48406746	48407264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_48406700_48407300
ENSMUSG00000042298.19_0	chr11	+	3388	10	FSM	ENSMUSG00000042298.19	ENSMUST00000050646.13	3410	10	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTTAAGATCTCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	62172322	62207243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62172520_62172610_62172715_62174422_62174534_62174956_62174996_62175828_62175886_62176649_62176712_62182949_62183045_62199867_62200020_62203841_62204005_62204835
ENSMUSG00000042302.15_2	chr11	-	3755	22	FSM	ENSMUSG00000042302.15	ENST00000405015.7	3771	22	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTAGTAGCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	22235861	21956785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006920_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042302.15_4	chr11	-	3761	22	NIC	ENSMUSG00000042302.15	novel	3771	22	NA	NA	7	-5	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGTAGTAGCCTTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	22235865	21956785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_21956872_21957082_21957198_21963483_21963558_21964854_21964955_22003431_22003556_22006520_22006628_22006782_22006922_22009136_22009262_22018358_22018507_22039524_22039669_22045317_22046200_22050421_22050471_22051051_22051231_22087837_22088058_22096462_22096701_22101066_22101190_22119034_22119175_22122824_22123007_22182001_22182056_22189142_22189239_22197969_22198028_22235487
ENSMUSG00000042303.20_0	chr15	+	2983	22	FSM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTGTTTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	80861973	80896485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80862067_80886769_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUSG00000042303.20_6	chr15	+	2894	21	ISM	ENSMUSG00000042303.20	ENSMUST00000139517.9	2997	22	24800	6	24728	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCAGTGTTTTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	80886765	80896485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_80886866_80887560_80887647_80888004_80888072_80890607_80890814_80890906_80891015_80891647_80891792_80892051_80892248_80892489_80892636_80892884_80893110_80893424_80893480_80893607_80893736_80893834_80893991_80894141_80894197_80894429_80894480_80894610_80894764_80894917_80894989_80895061_80895111_80895186_80895273_80895438_80895562_80895662_80895724_80895856
ENSMUSG00000042305.13_0	chr1	-	3132	8	FSM	ENSMUSG00000042305.13	ENSMUST00000049470.11	3149	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTTCTGGCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	134289707	134273841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134275933_134277820_134277977_134280092_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042305.13_3	chr1	-	1101	8	FSM	ENSMUSG00000042305.13	ENST00000503901.1	1120	8	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCATAGTTCCTGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	134289594	134275755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134275933_134277820_134277969_134280088_134280174_134282398_134282580_134283297_134283455_134288494_134288663_134289271_134289362_134289499
ENSMUSG00000042306.12_0	chr3	+	1043	4	FSM	ENSMUSG00000042306.12	ENSMUST00000167598.6	1059	4	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAAAATGTAAAATACG	NA	NA	NA	NA	NA	NA	NA	NA	90434176	90436128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90434207_90434478_90434601_90435020_90435168_90435384
ENSMUSG00000042306.12_1	chr3	+	992	3	ISM	ENSMUSG00000042306.12	ENSMUST00000167598.6	1059	4	324	15	324	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAATGTAAAATACGT	NA	NA	NA	NA	NA	NA	NA	NA	90434500	90436129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90434601_90435020_90435168_90435384
ENSMUSG00000042308.15_0	chr7	+	6447	19	FSM	ENSMUSG00000042308.15	ENSMUST00000047075.14	6487	19	28	12	28	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTACAAAAATGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127375869	127399282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127376520_127377284_127377450_127377677_127377774_127379556_127379828_127382800_127382923_127383144_127383375_127384019_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477
ENSMUSG00000042312.11_0	chr3	+	708	4	FSM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90421741	90431881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90421773_90422064_90422327_90423156_90423350_90431659
ENSMUSG00000042312.11_8	chr3	+	667	3	ISM	ENSMUSG00000042312.11	ENSMUST00000048138.8	715	4	333	7	333	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGATGCTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	90422074	90431881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90422327_90423156_90423350_90431659
ENSMUSG00000042320.18_6	chr12	-	2676	5	FSM	ENSMUSG00000042320.18	ENSMUST00000110249.3	2682	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	85153199	85133587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85134329_85134683_85134879_85136414_85136523_85140908_85142390_85153048
ENSMUSG00000042320.18_8	chr12	-	1069	3	FSM	ENSMUSG00000042320.18	ENST00000673765.1	1080	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCCTCCCGGGACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85142175	85134172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85134329_85134683_85134879_85141457
ENSMUSG00000042323.18_17	chr14	+	4887	29	FSM	ENSMUSG00000042323.18	ENST00000410007.5	4898	29	11	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGGAGGGAGGAACAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	30747477	30840923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806105_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUSG00000042323.18_2	chr14	+	7884	31	FSM	ENSMUSG00000042323.18	ENSMUST00000112095.8	7907	31	16	7	-16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGATTTGGATCAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	30741110	30843542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30741251_30744676_30744817_30747454_30747608_30749404_30749503_30752800_30752949_30754365_30754510_30757899_30758017_30760889_30760959_30762389_30762489_30766580_30766667_30767286_30767383_30768288_30768381_30771994_30772209_30774136_30774279_30776114_30776213_30783425_30783703_30786702_30786809_30789278_30789922_30796727_30796940_30804506_30804693_30806030_30806189_30806742_30807007_30809472_30809619_30811421_30811580_30827303_30827488_30828094_30828306_30829065_30829268_30835805_30835962_30838969_30839041_30839156_30839374_30840685
ENSMUSG00000042328.14_0	chr5	+	3331	14	FSM	ENSMUSG00000042328.14	ENSMUST00000112359.9	3345	14	6	8	-6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGTTCTGAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	112490954	112526272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112491030_112491909_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUSG00000042328.14_2	chr5	+	2824	14	FSM	ENSMUSG00000042328.14	ENSMUST00000035279.4	2836	14	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAAGTGAGTTCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	112490961	112526269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112491030_112492406_112492915_112494459_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512482_112514764_112514838_112516801_112516839_112517320_112517418_112517811_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUSG00000042328.14_24	chr5	+	965	8	ISM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	2689	5	2689	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGTGCAGCTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	112497147	112525995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_112497295_112510974_112511083_112511411_112511529_112512386_112512463_112518506_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUSG00000042328.14_9	chr5	+	1049	9	FSM	ENSMUSG00000042328.14	ENST00000336873.9	1059	9	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGGGTGCAGCTTGCATA	NA	NA	NA	NA	NA	NA	NA	NA	112494463	112525995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112494551_112497150_112497295_112510974_112511083_112511411_112511529_112512386_112512463_112518506_112518611_112522745_112522879_112523218_112523328_112525824
ENSMUSG00000042331.14_1	chr11	+	6091	8	FSM	ENSMUSG00000042331.14	ENSMUST00000049836.14	6091	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGGATATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	61909673	62032552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61909714_61920078_61920249_61933768_61933902_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62028875
ENSMUSG00000042331.14_12	chr11	+	2887	10	FSM	ENSMUSG00000042331.14	ENST00000679801.1	2901	10	9	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTCCATCGAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	61967886	62110326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62096209_62096327_62102469_62102530_62110110
ENSMUSG00000042331.14_18	chr11	+	6669	13	FSM	ENSMUSG00000042331.14	ENSMUST00000202179.2	6676	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGTGACATTTATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	61967929	62113839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61968063_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023281_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62102469_62102530_62110110
ENSMUSG00000042331.14_3	chr11	+	6044	7	ISM	ENSMUSG00000042331.14	ENSMUST00000049836.14	6091	8	10412	0	7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGGATATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	61920085	62032552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_61920249_61933768_61933902_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62028875
ENSMUSG00000042331.14_4	chr11	+	3114	12	FSM	ENSMUSG00000042331.14	ENST00000678019.1	3129	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTCCATCGAGAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	61933777	62110326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_61933902_62008525_62010109_62019025_62019234_62022655_62022730_62023101_62023308_62037131_62037278_62038393_62038495_62042695_62042778_62047312_62047467_62052633_62052737_62096209_62096327_62110110
ENSMUSG00000042340.7_0	chr7	+	1342	3	FSM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACATAGTTGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	127311907	127317354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127311952_127313096_127313216_127316175
ENSMUSG00000042340.7_1	chr7	+	1287	2	ISM	ENSMUSG00000042340.7	ENSMUST00000047393.7	1352	3	1200	10	992	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAACATAGTTGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	127313107	127317354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127313216_127316175
ENSMUSG00000042348.11_0	chr13	+	3341	5	FSM	ENSMUSG00000042348.11	ENSMUST00000091201.7	3364	5	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACAGGCGTTTCCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	113931055	114293989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_113931233_114058782_114058928_114070599_114070660_114104117_114104327_114291239
ENSMUSG00000042349.14_0	chr1	-	3250	22	FSM	ENSMUSG00000042349.14	ENSMUST00000062108.10	3251	22	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTATGGTACCTGACCG	NA	NA	NA	NA	NA	NA	NA	NA	131207343	131182333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131183076_131184623_131184696_131184853_131184961_131185637_131185735_131186918_131187021_131187742_131187783_131191009_131191087_131193375_131193492_131193611_131193688_131197537_131197625_131197754_131197847_131197922_131197988_131198623_131198821_131199499_131199680_131199844_131199956_131201107_131201269_131201377_131201560_131202886_131203017_131203443_131203585_131204204_131204316_131206435_131206525_131207068
ENSMUSG00000042350.14_0	chr12	-	5419	20	FSM	ENSMUSG00000042350.14	ENSMUST00000043169.14	5446	20	18	9	18	6	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAATAAAGAGCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	85017656	84964932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988504_84988732_84990105_84990167_84997826_84998156_85017402
ENSMUSG00000042350.14_3	chr12	-	4885	19	FSM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAAATGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	84997923	84964950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534_84988732_84990105_84990167_84997826
ENSMUSG00000042350.14_4	chr12	-	4790	18	ISM	ENSMUSG00000042350.14	ENST00000681099.1	4901	19	7759	12	7759	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTAAATAAAATGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	84990168	84964950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_84967355_84967453_84967630_84968031_84968122_84970633_84970693_84970769_84970900_84972467_84972594_84973007_84973188_84974074_84974185_84974642_84974719_84976891_84977014_84977122_84977265_84978472_84978551_84980925_84981174_84981343_84981525_84981727_84981898_84986933_84987172_84988534_84988732_84990105
ENSMUSG00000042354.8_0	chr14	-	1938	15	FSM	ENSMUSG00000042354.8	ENSMUST00000037739.8	1947	15	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTTAAGATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	30741101	30734390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30734592_30734679_30734747_30735123_30735282_30735385_30735523_30735609_30735753_30736009_30736185_30736546_30736635_30736862_30736984_30737231_30737342_30738278_30738412_30738783_30738865_30739013_30739125_30739232_30739371_30739764_30739824_30740885
ENSMUSG00000042357.3_0	chr4	-	1706	2	FSM	ENSMUSG00000042357.3	ENSMUST00000046498.3	1721	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGAAGCAGAGGGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127251964	127248606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_127250167_127251818
ENSMUSG00000042359.19_0	chr2	+	8246	27	FSM	ENSMUSG00000042359.19	ENSMUST00000111929.8	8257	27	3	8	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACAACCTGGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76236884	76430983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76237034_76329600_76329767_76344260_76344501_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ENSMUSG00000042359.19_1	chr2	+	3811	25	FSM	ENSMUSG00000042359.19	ENSMUST00000111930.9	3853	25	37	5	37	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAGGACAGAGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	76236938	76426935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76237034_76329600_76329767_76354232_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76390529_76390605_76395127_76395294_76398452_76398587_76407355_76407464_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ENSMUSG00000042359.19_4	chr2	+	2974	22	FSM	ENSMUSG00000042359.19	ENST00000409631.5	2995	22	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76354322	76426539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76354489_76370447_76370541_76376321_76376445_76378662_76378717_76379783_76379898_76380004_76380176_76382461_76382595_76385357_76385462_76386233_76386327_76395127_76395294_76398452_76398587_76409516_76409655_76414804_76414893_76415359_76415614_76416457_76416596_76417058_76417123_76418895_76418975_76420657_76420803_76422127_76422273_76423683_76423811_76425107_76425231_76426217
ENSMUSG00000042363.15_0	chr11	-	3269	4	ISM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	713	6	5	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATAGCTTCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	20780343	20773581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275
ENSMUSG00000042363.15_1	chr11	-	3355	5	FSM	ENSMUSG00000042363.15	ENSMUST00000047028.9	3362	5	1	6	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATAGCTTCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	20781055	20773581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20776516_20779268_20779447_20780037_20780127_20780275_20780348_20780973
ENSMUSG00000042363.15_2	chr11	-	3094	3	FSM	ENSMUSG00000042363.15	ENST00000409537.2	3100	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATAGCTTCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	20780346	20773581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20776516_20780037_20780127_20780275
ENSMUSG00000042363.15_3	chr11	-	3022	2	ISM	ENSMUSG00000042363.15	ENST00000409537.2	3100	3	223	4	223	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGATAGCTTCTGGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	20780125	20773581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_20776516_20780037
ENSMUSG00000042364.12_0	chr13	-	4432	2	FSM	ENSMUSG00000042364.12	ENSMUST00000109241.5	4447	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATCGCTTGTCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	113755091	113728720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113731399_113753337
ENSMUSG00000042364.12_1	chr13	-	1853	2	FSM	ENSMUSG00000042364.12	ENST00000326277.5	1869	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTATTTCCTTCGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	113754943	113731309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113731399_113753179
ENSMUSG00000042367.13_0	chr4	-	1612	2	FSM	ENSMUSG00000042367.13	ENSMUST00000106091.9	1623	2	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAATTCGGTTCTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	127222949	127219033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_127220565_127222868
ENSMUSG00000042367.13_1	chr4	-	1166	2	FSM	ENSMUSG00000042367.13	ENSMUST00000046532.4	1880	2	18	696	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGAACCAGGTGCTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	127224619	127219723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_127220565_127224294
ENSMUSG00000042369.9_0	chr2	+	1881	10	FSM	ENSMUSG00000042369.9	ENSMUST00000046389.5	1898	10	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	820	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTAAATCATGACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	76200335	76214103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76200773_76202378_76202502_76203903_76204031_76205699_76205823_76206662_76206849_76208724_76208855_76209021_76209107_76209261_76209426_76210708_76210910_76213798
ENSMUSG00000042371.13_0	chr11	-	1644	14	FSM	ENSMUSG00000042371.13	ENST00000417251.6	1649	14	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACACCAGTGGGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	61610732	61563823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61563938_61564049_61564108_61564351_61564568_61564654_61564824_61566952_61567104_61595076_61595213_61598619_61598826_61600104_61600186_61600416_61600523_61605861_61605967_61606089_61606150_61606503_61606609_61607070_61607143_61610667
ENSMUSG00000042371.13_1	chr11	-	1576	13	ISM	ENSMUSG00000042371.13	ENST00000417251.6	1649	14	3597	1	3597	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACACCAGTGGGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	61607139	61563823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_61563938_61564049_61564108_61564351_61564568_61564654_61564824_61566952_61567104_61595076_61595213_61598619_61598826_61600104_61600186_61600416_61600523_61605861_61605967_61606089_61606150_61606503_61606609_61607070
ENSMUSG00000042380.9_0	chr4	+	1002	2	FSM	ENSMUSG00000042380.9	ENSMUST00000142029.2	1022	2	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATACTGATGGAGTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	127137591	127141597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_127137692_127140695
ENSMUSG00000042389.14_0	chr6	+	2102	12	FSM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTCCGACCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	115521626	115555587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115521690_115524782_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042389.14_11	chr6	+	556	6	ISM	ENSMUSG00000042389.14	ENST00000679367.1	580	7	0	8823	0	-1570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTCCTCAGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	115538364	115554019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856
ENSMUSG00000042389.14_18	chr6	+	500	5	ISM	ENSMUSG00000042389.14	ENST00000444864.6	591	6	1	8590	1	-1570	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTTCCTCAGTGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	115542839	115554019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856
ENSMUSG00000042389.14_24	chr6	+	584	6	FSM	ENSMUSG00000042389.14	ENST00000444864.6	591	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAAATAGTCCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115542838	115562602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553949_115562448
ENSMUSG00000042389.14_31	chr6	+	526	5	ISM	ENSMUSG00000042389.14	ENST00000444864.6	591	6	2826	7	2826	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAAATAGTCCTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	115545664	115562602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_115545796_115551523_115551561_115552822_115552935_115553856_115553949_115562448
ENSMUSG00000042389.14_7	chr6	+	2037	11	ISM	ENSMUSG00000042389.14	ENSMUST00000040234.9	2106	12	3160	2	3160	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTCTCCGACCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	115524784	115555587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_115524992_115526873_115526956_115530951_115530989_115536553_115537062_115538340_115538419_115542837_115542889_115545656_115545796_115551523_115551561_115552822_115552935_115553856_115553947_115554891
ENSMUSG00000042390.10_1	chr3	+	7417	11	FSM	ENSMUSG00000042390.10	ENSMUST00000199754.5	7438	11	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCCTGTGACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90200499	90270708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90200732_90248962_90249302_90255873_90256004_90256661_90256794_90257693_90257826_90258710_90258882_90259120_90259437_90261614_90261818_90262981_90263093_90263437_90263556_90265175
ENSMUSG00000042396.11_0	chr9	-	1747	5	FSM	ENSMUSG00000042396.11	ENSMUST00000170000.4	1773	5	12	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACACAAAAAGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	48406585	48400014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48401289_48402147_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUSG00000042396.11_1	chr9	-	2605	4	FSM	ENSMUSG00000042396.11	ENSMUST00000213276.2	2629	4	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATACACAAAAAGAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	48406584	48400014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_48402239_48404706_48404795_48405318_48405482_48406454
ENSMUSG00000042404.17_0	chr3	+	5413	28	FSM	ENSMUSG00000042404.17	ENSMUST00000098914.10	5423	28	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCCTGTTCTCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	90173830	90187976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90173974_90174719_90175060_90175549_90175803_90176054_90176125_90176294_90176465_90176540_90176786_90177361_90177429_90177519_90177579_90177753_90177899_90178135_90178312_90178440_90178542_90178873_90179090_90179562_90179709_90180021_90180162_90180243_90180371_90181110_90181318_90181595_90181725_90182752_90182952_90183529_90183698_90184186_90184576_90184727_90184851_90185041_90185212_90185294_90185437_90185617_90185855_90186466_90186594_90186684_90186851_90186926_90186992_90187083
ENSMUSG00000042406.9_0	chr15	+	1705	3	FSM	ENSMUSG00000042406.9	ENSMUST00000109605.5	1725	3	10	10	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGTACCTATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80139394	80141732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80139887_80140407_80140723_80140834
ENSMUSG00000042406.9_2	chr15	+	1172	3	FSM	ENSMUSG00000042406.9	ENST00000674568.2	1187	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAGAGTTCCGTAATA	NA	NA	NA	NA	NA	NA	NA	NA	80139760	80141643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80139887_80140485_80140723_80140834
ENSMUSG00000042406.9_6	chr15	+	933	2	FSM	ENSMUSG00000042406.9	ENST00000680446.1	950	2	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGAAGAGAGTTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	80139758	80141639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80139887_80140834
ENSMUSG00000042406.9_7	chr15	+	1859	2	FSM	ENSMUSG00000042406.9	ENST00000337304.2	1877	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGAAAGTACCTATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	80139761	80141732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80140723_80140834
ENSMUSG00000042410.17_19	chr2	+	7098	20	FSM	ENSMUSG00000042410.17	ENST00000679478.1	7110	20	10	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTTGTTCTAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75662851	75761615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75662952_75681784_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ENSMUSG00000042410.17_2	chr2	+	706	5	FSM	ENSMUSG00000042410.17	ENST00000409888.1	721	5	9	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGATGGCGCTCCTGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75662621	75756549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75662856_75681837_75681928_75740004_75740045_75741964_75742023_75756265
ENSMUSG00000042410.17_25	chr2	+	1807	20	FSM	ENSMUSG00000042410.17	ENST00000681449.1	1825	20	7	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATGAAAAATGTTACCTT	NA	NA	NA	NA	NA	NA	NA	NA	75662854	75756400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75662932_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75756265
ENSMUSG00000042410.17_3	chr2	+	2036	20	FSM	ENSMUSG00000042410.17	ENST00000642466.2	2053	20	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGAGTTTCCGGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	75662631	75767570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75662856_75681837_75681928_75683065_75683157_75684513_75684635_75684874_75684950_75687360_75687433_75689242_75689323_75692277_75692359_75697090_75697217_75698648_75698758_75707814_75707943_75718459_75718512_75722135_75722213_75724388_75724502_75730525_75730596_75733261_75733324_75735202_75735293_75739944_75740045_75741964_75742023_75767353
ENSMUSG00000042414.8_0	chr1	-	1511	8	FSM	ENSMUSG00000042414.8	ENST00000276594.3	1523	8	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	604	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCGAATCCAGCAAGATC	NA	NA	NA	NA	NA	NA	NA	NA	13195838	13176154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_13176201_13184483_13184712_13186003_13186106_13188986_13189190_13192584_13192856_13194586_13194745_13194842_13194897_13195389
ENSMUSG00000042417.6_0	chr13	+	1843	3	FSM	ENSMUSG00000042417.6	ENSMUST00000038404.6	1875	3	28	4	28	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATCCTGTGTGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	113124363	113127307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_113124819_113125424_113125611_113126105
ENSMUSG00000042419.9_0	chr17	-	1430	4	FSM	ENSMUSG00000042419.9	ENSMUST00000048994.7	1447	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTCACTCCAGAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	35454759	35439158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35439953_35440112_35440335_35453927_35454208_35454625
ENSMUSG00000042423.10_0	chr7	+	4119	18	FSM	ENSMUSG00000042423.10	ENSMUST00000205432.3	4166	18	35	12	35	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGAGATTACCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	127078405	127090666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127078818_127079107_127079288_127080038_127080075_127080160_127080191_127081954_127082004_127082092_127082394_127083713_127084013_127084211_127084415_127084524_127084570_127084765_127084862_127085099_127085169_127086031_127086062_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUSG00000042423.10_1	chr7	+	2953	10	FSM	ENSMUSG00000042423.10	ENSMUST00000206394.2	2961	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATGAGATTACCCCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	127078763	127090666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127078818_127079107_127079288_127081954_127082004_127082092_127082394_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUSG00000042423.10_2	chr7	+	2897	9	ISM	ENSMUSG00000042423.10	ENSMUST00000206394.2	2961	10	348	6	348	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGATTACCCCCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	127079111	127090668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127079288_127081954_127082004_127082092_127082394_127086436_127086509_127086836_127086955_127087045_127087127_127088338_127088423_127088559_127088768_127088860
ENSMUSG00000042426.7_0	chr13	+	4670	27	FSM	ENSMUSG00000042426.7	ENSMUST00000038574.7	4682	27	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATCATATTTTGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	113063991	113105958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_113064508_113066160_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078366_113081027_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933_113092052_113092915_113093001_113095446_113095536_113096652_113096782_113096856_113096933_113097594_113097820_113099267_113099405_113099796_113099891_113100980_113101275_113101748_113101881_113103069_113103167_113105668
ENSMUSG00000042426.7_16	chr13	+	2422	14	ISM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	1220	7	1220	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGTAACTACAAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113067378	113092047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078371_113081035_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933
ENSMUSG00000042426.7_6	chr13	+	2497	15	FSM	ENSMUSG00000042426.7	ENST00000418655.2	2508	15	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGTAACTACAAATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	113066162	113092047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_113066235_113067375_113067490_113069040_113069171_113069617_113069764_113072002_113072132_113076906_113077034_113078206_113078371_113081035_113081194_113081603_113081728_113083296_113083909_113084745_113084890_113089336_113089514_113090207_113090349_113091681_113091827_113091933
ENSMUSG00000042428.7_0	chr15	+	4646	2	FSM	ENSMUSG00000042428.7	ENSMUST00000044970.7	4665	2	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGCGTGTGTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80057939	80099719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80058040_80095173
ENSMUSG00000042439.14_0	chr18	+	5467	6	FSM	ENSMUSG00000042439.14	ENSMUST00000049016.12	5503	6	21	15	21	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGTGCAAAAAAAAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	65713321	65822499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65713582_65715967_65716078_65756054_65758406_65815965_65816079_65818595_65818762_65820032
ENSMUSG00000042444.11_0	chr9	-	8069	9	FSM	ENSMUSG00000042444.11	ENSMUST00000049031.6	8081	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAACATTCTCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	70564450	70506301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_70512572_70514739_70514941_70518110_70518285_70524045_70524189_70534036_70534140_70538277_70538437_70541286_70541352_70552170_70552229_70563554
ENSMUSG00000042446.17_1	chr4	-	7258	30	FSM	ENSMUSG00000042446.17	ENST00000314607.11	7267	30	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1956	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAAGTTCCTTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	126861973	126755617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126758111_126759289_126759420_126762509_126762759_126763975_126764088_126771421_126771574_126776007_126776104_126776232_126776405_126783307_126783403_126783788_126783969_126784807_126784862_126787087_126787260_126789072_126789189_126792088_126792234_126793724_126793763_126794397_126794539_126796335_126796487_126798189_126798363_126799071_126799223_126799664_126799941_126800313_126800430_126800878_126801030_126804582_126804796_126804902_126805078_126808864_126809121_126809373_126809459_126816856_126817028_126817361_126817424_126819294_126819817_126842226_126842273_126861608
ENSMUSG00000042447.14_0	chr6	+	3684	12	FSM	ENSMUSG00000042447.14	ENSMUST00000040017.8	3710	12	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTAAAACGATAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	8209231	8236258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8209412_8211579_8211639_8214765_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ENSMUSG00000042447.14_8	chr6	+	2983	11	FSM	ENSMUSG00000042447.14	ENST00000405785.5	2998	11	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCAATGTGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8209283	8235597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8209420_8214702_8216100_8216371_8216471_8222460_8222716_8224554_8224725_8226843_8226910_8227968_8228128_8231160_8231314_8233049_8233255_8234231_8234362_8235384
ENSMUSG00000042451.13_0	chr1	+	1819	11	FSM	ENSMUSG00000042451.13	ENSMUST00000038445.13	1828	11	9	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCATGGGGTTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	134121194	134128969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134121465_134121551_134121687_134122314_134122483_134124707_134124797_134125088_134125285_134125467_134125608_134126138_134126299_134127451_134127589_134127687_134127875_134128132_134128186_134128685
ENSMUSG00000042460.6_0	chr6	+	6046	4	FSM	ENSMUSG00000042460.6	ENSMUST00000040159.6	6092	4	35	11	35	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTCAAAAATTGCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	7844876	7875676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_7845395_7863904_7864142_7866375_7867044_7871053
ENSMUSG00000042462.5_0	chr7	-	659	3	FSM	ENSMUSG00000042462.5	ENSMUST00000035276.5	676	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCAAAAACATCTCGATT	NA	NA	NA	NA	NA	NA	NA	NA	126859874	126856140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126856509_126858529_126858641_126859694
ENSMUSG00000042472.12_0	chr12	+	2580	12	FSM	ENSMUSG00000042472.12	ENSMUST00000045931.12	2597	12	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCTCTTTGGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84363638	84390493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_12	chr12	+	776	6	FSM	ENSMUSG00000042472.12	ENST00000639051.1	792	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTAAAGCTGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84376583	84386998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84376727_84378437_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875
ENSMUSG00000042472.12_3	chr12	+	1511	11	FSM	ENSMUSG00000042472.12	ENST00000540593.5	1520	11	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCTGATCCC	NA	NA	NA	NA	NA	NA	NA	NA	84363818	84389823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84385415_84385557_84386875_84387004_84389768
ENSMUSG00000042472.12_5	chr12	+	2230	11	FSM	ENSMUSG00000042472.12	ENST00000324593.10	2245	11	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCACCTCTTTGGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84363847	84390493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84363949_84368585_84368766_84369657_84369794_84372344_84372564_84374052_84374245_84376575_84376727_84378408_84378591_84379708_84379799_84384389_84384516_84386875_84387004_84389768
ENSMUSG00000042485.8_0	chr14	+	1208	3	FSM	ENSMUSG00000042485.8	ENSMUST00000040715.8	1236	3	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAAAAGTAACCTTCG	NA	NA	NA	NA	NA	NA	NA	NA	30601170	30603553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30601573_30602573_30602707_30602880
ENSMUSG00000042487.7_0	chr9	+	2165	12	FSM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCAAGTCCCTATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	75348825	75373707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_75348918_75352516_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ENSMUSG00000042487.7_4	chr9	+	2071	11	ISM	ENSMUSG00000042487.7	ENSMUST00000048937.6	2180	12	3697	11	3697	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAGGCAAGTCCCTATG	NA	NA	NA	NA	NA	NA	NA	NA	75352514	75373703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_75353276_75354383_75354489_75355583_75355679_75356638_75356785_75357769_75357855_75361905_75362001_75362922_75363058_75364339_75364476_75365356_75365544_75368287_75368386_75373475
ENSMUSG00000042489.16_0	chr4	+	5017	26	FSM	ENSMUSG00000042489.16	ENSMUST00000048391.15	5027	26	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGATTTGCTGTCCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	126450733	126487692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467102_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387_126485550_126486444_126486595_126486835
ENSMUSG00000042489.16_14	chr4	+	3957	24	FSM	ENSMUSG00000042489.16	ENST00000251195.9	3969	24	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGATTATATGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126450823	126485547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466071_126466264_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387
ENSMUSG00000042489.16_53	chr4	+	3696	23	FSM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	0	4	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGATTATATGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126450892	126485547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126450931_126453000_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387
ENSMUSG00000042489.16_74	chr4	+	3644	22	ISM	ENSMUSG00000042489.16	ENST00000373220.7	3700	23	2122	4	2122	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGATTATATGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	126453014	126485547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_126453110_126453711_126454146_126455550_126455713_126457699_126457778_126458725_126458799_126459482_126459592_126459763_126460375_126466928_126467141_126468433_126468610_126468887_126468953_126469638_126469836_126470134_126470290_126471405_126471636_126472115_126472228_126474752_126474829_126475224_126475323_126479630_126479796_126479897_126480020_126481350_126481479_126484332_126484436_126484976_126485060_126485387
ENSMUSG00000042492.13_0	chr7	-	3599	9	FSM	ENSMUSG00000042492.13	ENSMUST00000120705.3	3614	9	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACAAACATAGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	126807634	126796639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126798385_126798469_126798625_126798904_126799095_126799266_126799333_126799456_126799572_126802343_126802451_126802545_126802654_126802912_126803013_126806621
ENSMUSG00000042496.19_0	chr9	+	1937	7	FSM	ENSMUSG00000042496.19	ENSMUST00000117389.8	1952	7	14	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCATGAGCATTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31191847	31241913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_31191959_31224722_31224918_31227465_31227631_31229807_31229868_31236922_31237131_31238611_31238854_31240957
ENSMUSG00000042496.19_1	chr9	+	6772	22	FSM	ENSMUSG00000042496.19	ENSMUST00000215499.2	6772	22	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGCATGTTTCTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31191844	31293019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_31191963_31224722_31224918_31227465_31227631_31229807_31229868_31236976_31237131_31238611_31238854_31240957_31241162_31246612_31246686_31248600_31248719_31251625_31251756_31252537_31252781_31258088_31258437_31260407_31260564_31264582_31264763_31265770_31265882_31268437_31268639_31270303_31270448_31271044_31271216_31272116_31272219_31273626_31273796_31282119_31282224_31289635
ENSMUSG00000042502.11_0	chr7	-	3273	7	FSM	ENSMUSG00000042502.11	ENSMUST00000166791.8	3284	7	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTTTTTTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126795168	126790838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794634_126795100
ENSMUSG00000042502.11_1	chr7	-	2867	6	ISM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	479	7	416	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTCGGAAGTGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	126794631	126791174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532
ENSMUSG00000042502.11_3	chr7	-	2899	7	FSM	ENSMUSG00000042502.11	ENSMUST00000206026.2	2906	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTCGGAAGTGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	126795110	126791174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795086
ENSMUSG00000042502.11_5	chr7	-	2911	7	FSM	ENSMUSG00000042502.11	ENSMUST00000205316.2	2912	7	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTGTGGTAATTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	126795159	126791197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126795100
ENSMUSG00000042502.11_8	chr7	-	1291	7	FSM	ENSMUSG00000042502.11	ENSMUST00000035771.5	1309	7	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTCCTTTTGGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	126795029	126792829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126793103_126793186_126793294_126793374_126793814_126793915_126794074_126794194_126794331_126794532_126794640_126794958
ENSMUSG00000042505.7_0	chr6	+	4304	2	FSM	ENSMUSG00000042505.7	ENSMUST00000040826.6	4323	2	10	9	-7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATTGGGTAACGATCA	NA	NA	NA	NA	NA	NA	NA	NA	6956013	7042970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_6956201_7038853
ENSMUSG00000042505.7_3	chr6	+	348	2	FSM	ENSMUSG00000042505.7	ENST00000432641.3	369	2	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAACCACAGTTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	6956032	7039039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_6956205_7038863
ENSMUSG00000042506.16_0	chr11	-	4416	13	FSM	ENSMUSG00000042506.16	ENSMUST00000041683.9	4434	13	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAACCTGACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	61065872	61042619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61045340_61046005_61046156_61046593_61046657_61047996_61048089_61049117_61049245_61050030_61050190_61051397_61051504_61052139_61052288_61053652_61053823_61054551_61054654_61057496_61057611_61059085_61059219_61065540
ENSMUSG00000042508.17_0	chr5	-	3798	18	FSM	ENSMUSG00000042508.17	ENSMUST00000071921.13	3806	18	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTGAGAATTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	9211769	9168801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9176539_9176750_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUSG00000042508.17_5	chr5	-	3483	17	FSM	ENSMUSG00000042508.17	ENSMUST00000095017.11	3498	17	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCAAGATTTTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	9211739	9168876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_9170139_9170349_9170495_9171084_9171463_9171781_9171938_9174441_9174528_9177956_9178109_9179147_9179377_9180367_9180478_9181275_9181309_9182455_9182614_9186065_9186143_9187125_9187241_9190385_9190481_9198899_9199023_9200375_9200493_9201797_9201919_9211613
ENSMUSG00000042510.8_0	chr1	+	2905	4	FSM	ENSMUSG00000042510.8	ENSMUST00000039323.8	2909	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGATTCTGGAGTCCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	130659712	130672355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_130659961_130665238_130665425_130668739_130668921_130670065
ENSMUSG00000042515.14_0	chrX	+	4587	7	FSM	ENSMUSG00000042515.14	ENSMUST00000113043.8	4600	7	9	4	7	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGATTTTGTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	138110799	138139078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_138110967_138111487_138111556_138112107_138112185_138113839_138113988_138132034_138132164_138134427_138134595_138135247
ENSMUSG00000042515.14_2	chrX	+	4503	6	FSM	ENSMUSG00000042515.14	ENSMUST00000113045.9	4523	6	14	6	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGATTTTGTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	138110806	138139078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_138110967_138111487_138111556_138113839_138113988_138132034_138132164_138134427_138134595_138135247
ENSMUSG00000042515.14_4	chrX	+	4176	4	FSM	ENSMUSG00000042515.14	ENSMUST00000113042.3	4182	4	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGATTTTGTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	138117914	138139078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_138117964_138132034_138132164_138134427_138134595_138135247
ENSMUSG00000042515.14_5	chrX	+	4125	3	ISM	ENSMUSG00000042515.14	ENSMUST00000113041.9	4343	5	14122	6	14122	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATTGATTTTGTATTATT	NA	NA	NA	NA	NA	NA	NA	NA	138132036	138139078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_138132164_138134427_138134595_138135247
ENSMUSG00000042520.17_12	chr3	-	4057	28	FSM	ENSMUSG00000042520.17	ENSMUST00000064639.15	4073	28	12	4	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTACCTTCAGCCTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	89959770	89907598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938602_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000042520.17_16	chr3	-	3936	27	ISM	ENSMUSG00000042520.17	ENSMUST00000196843.5	3975	28	4567	27	6	17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAAAAGGAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89955202	89907626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ENSMUSG00000042520.17_23	chr3	-	3850	26	FSM	ENSMUSG00000042520.17	ENST00000361546.6	3865	26	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATACATAT	NA	NA	NA	NA	NA	NA	NA	NA	89955200	89907650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89908299_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076
ENSMUSG00000042520.17_3	chr3	-	3504	29	FSM	ENSMUSG00000042520.17	ENSMUST00000029553.16	3509	29	3	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCTCTCACCTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	89959769	89907448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89907561_89909124_89909176_89909585_89909784_89910551_89910620_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000042520.17_36	chr3	-	3612	25	FSM	ENSMUSG00000042520.17	ENSMUST00000090908.11	3629	25	1	16	1	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAACAAAACTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	89959758	89913316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89941371_89941485_89941961_89942008_89945676_89945773_89946154_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000042520.17_42	chr3	-	3428	25	ISM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	4575	3	4	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTCTGCGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89955204	89913529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076
ENSMUSG00000042520.17_43	chr3	-	3491	26	FSM	ENSMUSG00000042520.17	ENSMUST00000199834.5	3494	26	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTCTGCGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89959822	89913529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959761
ENSMUSG00000042520.17_44	chr3	-	3510	26	FSM	ENSMUSG00000042520.17	ENSMUST00000195995.5	3516	26	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTAACTCTGCGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	89959776	89913529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89913925_89915562_89915669_89916416_89916635_89917739_89917822_89919992_89920047_89922436_89922526_89922608_89922805_89924005_89924079_89924421_89924597_89925720_89925776_89926458_89926649_89928203_89928377_89928545_89928824_89930737_89930937_89932369_89932542_89933899_89933986_89935631_89935685_89938617_89938678_89941371_89941485_89941961_89942008_89945676_89945773_89946121_89946324_89951006_89951118_89952160_89952239_89955076_89955207_89959696
ENSMUSG00000042523.13_0	chr12	+	5711	8	FSM	ENSMUSG00000042523.13	ENSMUST00000123491.8	5727	8	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTATAAAAAAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84161139	84190275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84161174_84168056_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
ENSMUSG00000042523.13_3	chr12	+	469	4	FSM	ENSMUSG00000042523.13	ENST00000554339.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACATATTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	84161148	84185303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84161174_84182340_84182468_84183270_84183412_84185127
ENSMUSG00000042523.13_4	chr12	+	738	7	ISM	ENSMUSG00000042523.13	ENSMUST00000046340.9	790	8	6807	0	6787	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTGTCTATTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84167951	84185231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_84168096_84171248_84171359_84173735_84173792_84178105_84178162_84182340_84182468_84183270_84183412_84185127
ENSMUSG00000042523.13_6	chr12	+	432	3	ISM	ENSMUSG00000042523.13	ENST00000554339.5	469	4	21203	1	21187	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAACATATTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	84182351	84185302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_84182468_84183270_84183412_84185127
ENSMUSG00000042524.15_0	chr15	-	3757	18	FSM	ENSMUSG00000042524.15	ENSMUST00000100439.10	3768	18	5	6	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCATTGGAGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79626700	79608277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620121_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
ENSMUSG00000042524.15_1	chr15	-	3673	17	FSM	ENSMUSG00000042524.15	ENSMUST00000089311.11	3709	17	29	7	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCATTGGAGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79626706	79608277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620127_79621266_79621361_79622720_79622862_79623020_79623212_79623921_79624083_79626539
ENSMUSG00000042524.15_3	chr15	-	3800	18	FSM	ENSMUSG00000042524.15	ENSMUST00000046259.14	3804	18	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCATTGGAGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	79626737	79608277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79609762_79610742_79610836_79610991_79611160_79611251_79611368_79611716_79611802_79612063_79612286_79612616_79612783_79613233_79613278_79613681_79613760_79614290_79614546_79618308_79618437_79620046_79620127_79621266_79621361_79621673_79621770_79622720_79622862_79623020_79623212_79623921_79624083_79626539
ENSMUSG00000042529.15_0	chr11	+	2437	3	FSM	ENSMUSG00000042529.15	ENSMUST00000041944.9	2459	3	18	4	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGAATCTGGCTTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	60956647	60961949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60956804_60957491_60957777_60959953
ENSMUSG00000042532.15_0	chr19	+	1251	5	FSM	ENSMUSG00000042532.15	ENST00000596005.2	1259	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAGGGGCACATGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	42251766	42442127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42251894_42255189_42255343_42255415_42255518_42256790_42257621_42442088
ENSMUSG00000042532.15_1	chr19	+	1207	4	ISM	ENSMUSG00000042532.15	ENSMUST00000087123.6	2823	5	7594	1167	13	-1167	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACTGTGTGCGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	42251771	42257620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_42251894_42255189_42255343_42255415_42255518_42256790
ENSMUSG00000042535.10_0	chr15	+	3433	12	FSM	ENSMUSG00000042535.10	ENSMUST00000046463.10	3449	12	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGACAGTGTCATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	79575054	79605673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79575300_79578356_79578469_79591192_79591374_79591895_79592245_79596296_79596421_79597564_79597680_79600047_79600193_79600286_79600470_79601183_79601320_79601795_79601975_79603228_79603430_79604210
ENSMUSG00000042541.11_0	chr6	-	1454	3	FSM	ENSMUSG00000042541.11	ENSMUST00000041111.10	1472	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4057	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACTGAAATACAAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	6578647	6557300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_6558492_6560407_6560502_6578478
ENSMUSG00000042548.15_0	chr2	+	6951	12	FSM	ENSMUSG00000042548.15	ENSMUST00000227428.2	6981	12	22	8	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCACTTGTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	153187770	153245919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153188311_153194108_153194192_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ENSMUSG00000042548.15_1	chr2	+	6918	12	FSM	ENSMUSG00000042548.15	ENST00000613218.4	6938	12	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCACTTGTCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	153187807	153245919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153188311_153194108_153194196_153198989_153199099_153233448_153233570_153233644_153233743_153234760_153234855_153235268_153235422_153235543_153235708_153235801_153235899_153238651_153238758_153239295_153239921_153241158
ENSMUSG00000042549.11_0	chr11	-	1278	2	FSM	ENSMUSG00000042549.11	ENSMUST00000123544.2	1291	2	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGACTTGTATTTATGGGT	NA	NA	NA	NA	NA	NA	NA	NA	60822689	60811751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60812732_60822391
ENSMUSG00000042557.15_0	chr9	+	5067	21	FSM	ENSMUSG00000042557.15	ENSMUST00000168177.8	5086	21	7	12	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAAGTAACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	56983689	57035638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56983915_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025456_57026376_57026472_57032452_57032661_57034431
ENSMUSG00000042557.15_14	chr9	+	4943	21	ISM	ENSMUSG00000042557.15	ENSMUST00000168678.8	5206	22	4717	10	-65	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAAGTAACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	56988376	57035638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_56988487_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUSG00000042557.15_19	chr9	+	4823	20	FSM	ENSMUSG00000042557.15	ENSMUST00000049169.6	4845	20	10	12	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAATAAGTAACATAAG	NA	NA	NA	NA	NA	NA	NA	NA	56993874	57035638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUSG00000042557.15_2	chr9	+	4837	21	FSM	ENSMUSG00000042557.15	ENST00000394949.8	4858	21	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAACTGCTCTAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	56983770	57035433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56983980_56993864_56994086_56996661_56996839_57001720_57001828_57002582_57002866_57004005_57004258_57005109_57005263_57005389_57005549_57008401_57008492_57011154_57011274_57011878_57012090_57012862_57012980_57014637_57014877_57015991_57016176_57017862_57018437_57020829_57021000_57024665_57024840_57025353_57025447_57026376_57026472_57032452_57032661_57034431
ENSMUSG00000042558.17_0	chr4	-	1653	6	FSM	ENSMUSG00000042558.17	ENSMUST00000102617.5	1672	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATCCCAGCATGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126215487	126209849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126210659_126211095_126211197_126211512_126211698_126211776_126211985_126212191_126212289_126215234
ENSMUSG00000042564.14_1	chr15	-	1048	10	FSM	ENSMUSG00000042564.14	ENST00000540952.6	1064	10	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGACTGGTCAGGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	79534003	79507710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79507789_79520894_79520988_79521214_79521339_79524204_79524310_79524844_79524947_79526314_79526462_79527492_79527573_79528148_79528219_79532937_79533021_79533837
ENSMUSG00000042567.21_0	chr14	-	2156	14	FSM	ENSMUSG00000042567.21	ENST00000295720.10	2177	14	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGAGATAACAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	7539178	7462329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7463119_7468562_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7499997_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975_7532190_7538442_7538514_7539058
ENSMUSG00000042567.21_9	chr14	-	1330	13	FSM	ENSMUSG00000042567.21	ENST00000383771.8	1349	13	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTGAGATCCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	7539176	7468567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_7468619_7468698_7468752_7470570_7470680_7482985_7483097_7489147_7489249_7500027_7500166_7500250_7500289_7512157_7512213_7513905_7513993_7514084_7514269_7531975_7532190_7538442_7538514_7539058
ENSMUSG00000042569.14_0	chr11	+	1533	7	FSM	ENSMUSG00000042569.14	ENSMUST00000042281.14	1553	7	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGCTCTTAGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	60721476	60749249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60721558_60734990_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042569.14_2	chr11	+	3218	6	ISM	ENSMUSG00000042569.14	ENSMUST00000108718.2	3277	7	13484	8	13484	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGACAGTTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	60734988	60751013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_60735170_60739926_60740031_60742567_60742785_60743244_60743338_60746525_60746679_60748543
ENSMUSG00000042570.15_0	chr10	-	2515	13	ISM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	4708	6	4708	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	79386217	79376084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149
ENSMUSG00000042570.15_1	chr10	-	2556	14	FSM	ENSMUSG00000042570.15	ENSMUST00000062855.15	2562	14	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	79390925	79376084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384738_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUSG00000042570.15_2	chr10	-	2657	14	FSM	ENSMUSG00000042570.15	ENSMUST00000165028.8	2676	14	13	6	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCGGGGTGTCTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	79391020	79376084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79377034_79377347_79377769_79378238_79378316_79378430_79378556_79380353_79380449_79380522_79380605_79380878_79381031_79383488_79383559_79384187_79384277_79384619_79384744_79385017_79385144_79385370_79385514_79386149_79386241_79390907
ENSMUSG00000042572.13_0	chr3	+	3049	13	FSM	ENSMUSG00000042572.13	ENSMUST00000038356.13	3077	13	11	17	11	-17	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTATTTAAAGAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	89680933	89691290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89681346_89683383_89683489_89683818_89683924_89684537_89684589_89686735_89686877_89687061_89687147_89687743_89687805_89687993_89688085_89688195_89688255_89688353_89688403_89688674_89688771_89689077_89689145_89689563
ENSMUSG00000042579.3_0	chr3	-	4654	1	FSM	ENSMUSG00000042579.3	ENSMUST00000195940.2	4671	1	8	9	8	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATAAAATTTACTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	89680090	89675436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89675400_89680100
ENSMUSG00000042581.15_3	chr1	+	5769	26	FSM	ENSMUSG00000042581.15	ENST00000413152.3	5788	26	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	2373	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGACTGGAACACTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	129523113	130147003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_129523918_129540846_129541096_129556613_129556784_129595550_129595707_129605785_129605984_129686182_129686375_129688005_129688241_129704029_129704146_129744379_129744510_129750328_129750433_129843289_129843485_129848984_129849252_129879126_129879311_130030807_130030942_130044296_130044448_130087310_130087453_130090556_130090673_130092785_130092904_130108088_130108235_130116196_130116357_130117592_130117767_130117867_130117964_130120290_130120374_130122843_130123037_130137977_130138066_130145835
ENSMUSG00000042590.18_0	chr13	-	4130	30	FSM	ENSMUSG00000042590.18	ENSMUST00000186033.7	4147	30	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	107061653	106930958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106994006_106994034_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520
ENSMUSG00000042590.18_3	chr13	-	4299	30	FSM	ENSMUSG00000042590.18	ENSMUST00000080856.14	4325	30	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATACCTCACCTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	107073452	106930958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_106932304_106948715_106948801_106959463_106959560_106978596_106978719_106983853_106983968_106984748_106984845_106993245_106993327_106993736_106993817_106997368_106997446_107002372_107002489_107007182_107007297_107011998_107012116_107012746_107012788_107013442_107013477_107016120_107016248_107019349_107019456_107020033_107020082_107023174_107023266_107025870_107025915_107028123_107028277_107028930_107029124_107032312_107032384_107033723_107033773_107035426_107035486_107037192_107037326_107046707_107046912_107047251_107047325_107056031_107056133_107061520_107061665_107073267
ENSMUSG00000042594.17_0	chr5	-	4171	9	FSM	ENSMUSG00000042594.17	ENSMUST00000086310.8	4195	9	14	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGCAGCATTGTCACCA	NA	NA	NA	NA	NA	NA	NA	NA	121974908	121953720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121974612
ENSMUSG00000042594.17_2	chr5	-	2743	9	FSM	ENSMUSG00000042594.17	ENSMUST00000122426.8	2777	9	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGGAGGGTGGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	121974140	121955079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121970565_121970654_121973913
ENSMUSG00000042594.17_3	chr5	-	2512	8	FSM	ENSMUSG00000042594.17	ENSMUST00000040308.14	2530	8	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCACTGCCCTACTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	121974900	121955283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121956157_121956278_121956451_121956527_121956743_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ENSMUSG00000042594.17_5	chr5	-	2370	8	FSM	ENSMUSG00000042594.17	ENSMUST00000118580.6	2393	8	15	8	15	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTACCTCAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	121974865	121955360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121956157_121956278_121956451_121956527_121956713_121956822_121956918_121957001_121957094_121957169_121957272_121966464_121967140_121974612
ENSMUSG00000042599.9_6	chr6	-	6011	20	FSM	ENSMUSG00000042599.9	ENST00000397560.7	6026	20	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGTGTTTAAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	39183602	39116994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_39120240_39121225_39121494_39122402_39122489_39123788_39123998_39124121_39124271_39124637_39124736_39125875_39126031_39126220_39126346_39128187_39128402_39129746_39129837_39135147_39135240_39142030_39142138_39143600_39143689_39145874_39146038_39147057_39147245_39147702_39147845_39150211_39150373_39152296_39152415_39158461_39158548_39183374
ENSMUSG00000042605.17_0	chr5	+	3194	22	FSM	ENSMUSG00000042605.17	ENST00000535949.5	3198	22	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCGGAAGCACAGAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	121849500	121952486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121849587_121885472_121885533_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_39	chr5	+	2939	20	FSM	ENSMUSG00000042605.17	ENST00000644883.1	2956	20	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCGATAGGTATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121850068	121941223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010
ENSMUSG00000042605.17_47	chr5	+	2974	20	FSM	ENSMUSG00000042605.17	ENST00000647305.1	2990	20	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGCGATAGGTATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	121850067	121941223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935883_121940143_121940329_121941010
ENSMUSG00000042605.17_5	chr5	+	4494	23	FSM	ENSMUSG00000042605.17	ENST00000616825.4	4513	23	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACTGATACCCAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121849508	121953004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_54	chr5	+	3846	24	FSM	ENSMUSG00000042605.17	ENST00000389153.10	3873	24	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	121850065	121952985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121919395_121919606_121921919_121922103_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121944284_121944339_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042605.17_82	chr5	+	3451	23	FSM	ENSMUSG00000042605.17	ENST00000673283.1	3462	23	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTAATGGCCCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121850110	121952701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121850340_121883785_121883823_121885472_121885533_121885987_121886060_121887141_121887293_121910729_121910852_121915432_121915525_121915970_121916169_121917480_121917660_121921919_121922103_121923277_121923476_121923821_121923930_121924396_121924468_121933000_121933312_121934435_121934500_121935285_121935439_121935787_121935849_121940143_121940329_121941010_121941144_121948913_121949060_121949447_121949676_121951447_121951617_121952400
ENSMUSG00000042606.10_0	chr7	+	2745	7	FSM	ENSMUSG00000042606.10	ENSMUST00000037248.10	2766	7	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCCAACAACACACACACT	NA	NA	NA	NA	NA	NA	NA	NA	126461152	126464537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126461689_126461771_126461893_126461989_126462099_126462340_126463423_126463491_126463658_126463734_126463834_126463905
ENSMUSG00000042608.16_0	chr4	+	3843	13	FSM	ENSMUSG00000042608.16	ENSMUST00000116286.9	3860	13	10	7	-5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCACCATGGTCTGTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	125997759	126034814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125997940_126011256_126011544_126012066_126012134_126017508_126017629_126018875_126018962_126019467_126019612_126022611_126022840_126023490_126023544_126028804_126028921_126030562_126030708_126030869_126030990_126031553_126031639_126032602
ENSMUSG00000042613.10_0	chr3	+	4478	11	FSM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTTCTTCTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	89344013	89358259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ENSMUSG00000042613.10_15	chr3	+	807	7	ISM	ENSMUSG00000042613.10	ENST00000368460.7	860	8	2789	0	-10	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCAAGGGGGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89346833	89353724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353379_89353481_89353586
ENSMUSG00000042613.10_16	chr3	+	4403	10	ISM	ENSMUSG00000042613.10	ENSMUST00000038942.10	4479	11	2812	0	-19	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTGGTTCTTCTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	89346824	89358259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353098_89353123_89353397_89353481_89353586_89353719_89354352_89355573_89355979
ENSMUSG00000042613.10_21	chr3	+	2101	8	FSM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGATGGGCGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	89346845	89355577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_27	chr3	+	2031	7	ISM	ENSMUSG00000042613.10	ENST00000368463.8	2105	8	3592	2	3592	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGATGGGCGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	89350435	89355577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042613.10_3	chr3	+	860	8	FSM	ENSMUSG00000042613.10	ENST00000368460.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCAAGGGGGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	89344044	89353724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89344088_89346823_89346909_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352900_89353379_89353481_89353586
ENSMUSG00000042613.10_6	chr3	+	2081	8	FSM	ENSMUSG00000042613.10	ENST00000368465.5	2083	8	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGGGATGGGCGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	89344044	89355577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89344088_89350428_89350556_89350758_89350824_89350902_89351063_89352758_89352987_89353379_89353481_89353586_89353719_89354352
ENSMUSG00000042616.9_0	chr4	+	4986	10	FSM	ENSMUSG00000042616.9	ENSMUST00000035497.5	5013	10	7	20	7	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGAAAATAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	125952364	125985968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125952586_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042616.9_1	chr4	+	1466	11	FSM	ENSMUSG00000042616.9	ENSMUST00000143712.3	1473	11	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCAGACCTTCCCCATTA	NA	NA	NA	NA	NA	NA	NA	NA	125952398	125982452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125952586_125958742_125958773_125967597_125967753_125970509_125970678_125971128_125971210_125976674_125976779_125977388_125977518_125978185_125978256_125980335_125980476_125981498_125981563_125982114
ENSMUSG00000042622.15_0	chr15	+	898	2	FSM	ENSMUSG00000042622.15	ENST00000538999.1	905	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCGTTAGGGTTCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	79231690	79242254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79231955_79241620
ENSMUSG00000042622.15_1	chr15	+	1947	3	FSM	ENSMUSG00000042622.15	ENSMUST00000096350.11	1958	3	7	4	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAGAAGTGTATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	79231726	79243272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79231955_79241166_79241234_79241620
ENSMUSG00000042625.17_0	chr17	-	3261	21	FSM	ENSMUSG00000042625.17	ENSMUST00000075510.12	3277	21	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACAAGGTTTCTGCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	56891576	56869945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56870244_56870361_56870432_56870511_56870625_56871503_56871635_56872218_56872262_56872944_56873083_56873325_56873617_56873878_56874016_56874532_56874625_56875894_56876023_56878209_56878320_56878399_56878550_56881201_56881303_56881902_56881953_56882354_56883013_56883877_56883906_56884842_56884906_56885640_56885845_56885920_56885986_56889983_56890072_56891273
ENSMUSG00000042626.14_0	chr3	+	3141	13	FSM	ENSMUSG00000042626.14	ENSMUST00000191485.7	3154	13	0	13	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCGGCCTCTCAACTCCT	NA	NA	NA	NA	NA	NA	NA	NA	89325857	89337321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89326017_89329484_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623
ENSMUSG00000042626.14_12	chr3	+	2397	11	FSM	ENSMUSG00000042626.14	ENST00000368449.8	2408	11	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTATTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89328981	89336998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89329211_89331023_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042626.14_9	chr3	+	2993	13	FSM	ENSMUSG00000042626.14	ENST00000368445.9	3005	13	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTTTATTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89328982	89336998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89329653_89330232_89330304_89330814_89330879_89331003_89331124_89331496_89331551_89331861_89331914_89332072_89332200_89333821_89334009_89334094_89334165_89334245_89334378_89334514_89334754_89335623_89336403_89336570
ENSMUSG00000042628.9_0	chr12	-	4413	13	FSM	ENSMUSG00000042628.9	ENSMUST00000221919.2	4420	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACAGCTGTGTTGGCTCG	NA	NA	NA	NA	NA	NA	NA	NA	83643881	83593331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643177_83643379_83643770
ENSMUSG00000042628.9_5	chr12	-	4018	12	FSM	ENSMUSG00000042628.9	ENSMUST00000048319.6	4036	12	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATTTTAAAAAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	83643993	83593637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_83594890_83597594_83597709_83598239_83598421_83599149_83599321_83601716_83601835_83601938_83602037_83602374_83602484_83605387_83605495_83615622_83615838_83621405_83621911_83641171_83642097_83643770
ENSMUSG00000042632.18_11	chr15	-	2482	15	ISM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	10249	5	9961	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79202203	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_12	chr15	-	2646	16	ISM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	10250	5	9962	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79202202	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960
ENSMUSG00000042632.18_13	chr15	-	2692	17	FSM	ENSMUSG00000042632.18	ENST00000663895.1	2697	17	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79212452	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202206_79212409
ENSMUSG00000042632.18_14	chr15	-	2809	17	FSM	ENSMUSG00000042632.18	ENST00000332509.8	2822	17	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79212444	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202206_79212284
ENSMUSG00000042632.18_16	chr15	-	2532	16	FSM	ENSMUSG00000042632.18	ENST00000402064.5	2537	16	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79212452	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ENSMUSG00000042632.18_2	chr15	-	3342	16	FSM	ENSMUSG00000042632.18	ENSMUST00000166977.9	3365	16	15	8	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCAAGTTCATTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79212361	79170435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79211834
ENSMUSG00000042632.18_25	chr15	-	2555	16	FSM	ENSMUSG00000042632.18	ENST00000664587.1	2560	16	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79212452	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186921_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212409
ENSMUSG00000042632.18_29	chr15	-	2968	17	FSM	ENSMUSG00000042632.18	ENST00000660610.1	2980	17	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCATCAAGGACCCCACA	NA	NA	NA	NA	NA	NA	NA	NA	79241972	79170761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79188504_79188670_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202206_79241653
ENSMUSG00000042632.18_4	chr15	-	2940	16	FSM	ENSMUSG00000042632.18	ENSMUST00000047816.15	2963	16	15	8	-10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCAAGTTCATTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	79212413	79170435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79171096_79171309_79171384_79171815_79171984_79173330_79173486_79173778_79173916_79181498_79181650_79183231_79183396_79186818_79186898_79189902_79190012_79190483_79190667_79191512_79191610_79192868_79193057_79195993_79196178_79197147_79197364_79201960_79202211_79212288
ENSMUSG00000042641.20_0	chr1	-	2899	16	ISM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	2297	7	2297	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTACTTACATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	153717583	153669505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_153669626_153669833_153669973_153675539_153675715_153677981_153678112_153679759_153679875_153680355_153680474_153683426_153683621_153687959_153688063_153693245_153693358_153697096_153697320_153698054_153698118_153701021_153701990_153703186_153703349_153713800_153713931_153715467_153715543_153717511
ENSMUSG00000042641.20_1	chr1	-	2943	17	FSM	ENSMUSG00000042641.20	ENST00000294854.13	2950	17	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTACTTACATCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	153719880	153669505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153669626_153669833_153669973_153675539_153675715_153677981_153678112_153679759_153679875_153680355_153680474_153683426_153683621_153687959_153688063_153693245_153693358_153697096_153697320_153698054_153698118_153701021_153701990_153703186_153703349_153713800_153713931_153715467_153715543_153717511_153717595_153719847
ENSMUSG00000042642.14_10	chr3	-	1070	4	FSM	ENSMUSG00000042642.14	ENST00000295530.6	1092	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGGAGAGAAATTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	89316478	89310498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89310609_89310803_89310915_89313161_89313261_89315728
ENSMUSG00000042642.14_11	chr3	-	1964	4	FSM	ENSMUSG00000042642.14	ENST00000368433.5	1976	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGACAGGATTGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	89319160	89312885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89313261_89314715_89314864_89315728_89316474_89318464
ENSMUSG00000042642.14_2	chr3	-	2873	8	FSM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	9	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTCAAAGGGGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	89319161	89309285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319090
ENSMUSG00000042642.14_3	chr3	-	2803	7	ISM	ENSMUSG00000042642.14	ENSMUST00000129308.9	2892	8	482	10	480	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTCAAAGGGGAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	89318688	89309285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464
ENSMUSG00000042642.14_7	chr3	-	2225	8	FSM	ENSMUSG00000042642.14	ENSMUST00000107426.8	2238	8	13	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTTCTGCTGAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	89319163	89309973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89310609_89310702_89310777_89312887_89313078_89313161_89313261_89314715_89314864_89315728_89316474_89318464_89318688_89319052
ENSMUSG00000042644.10_0	chr17	+	8976	58	FSM	ENSMUSG00000042644.10	ENSMUST00000049308.9	8990	58	7	7	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATCCACAGGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	27276284	27341190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27276649_27292071_27292143_27302503_27302626_27304062_27304150_27305812_27305972_27306119_27306219_27306564_27306649_27307925_27308073_27308235_27308332_27308589_27308641_27308803_27308947_27310284_27310385_27310466_27310628_27310787_27310930_27312148_27312311_27313768_27313942_27314437_27314558_27314860_27315044_27316935_27317188_27317287_27317433_27317947_27318090_27318573_27318774_27320078_27320209_27320556_27320615_27321740_27321907_27322806_27322972_27323047_27323123_27323498_27323625_27324467_27324591_27325179_27325381_27326203_27326456_27326583_27326710_27326790_27326917_27329453_27329575_27329804_27329996_27330171_27330321_27330437_27330547_27330638_27330730_27330830_27331001_27332464_27332640_27332717_27332900_27333053_27333255_27333368_27333480_27333820_27333917_27334001_27334104_27334188_27334276_27334646_27334758_27334859_27335053_27335145_27335272_27335582_27335756_27336139_27336305_27336706_27336900_27337330_27337436_27337518_27337647_27338188_27338355_27338841_27339003_27339904_27340067_27340433
ENSMUSG00000042647.14_0	chr5	-	3861	11	FSM	ENSMUSG00000042647.14	ENSMUST00000041252.13	3881	11	19	1	19	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCTTCTTGATCATGA	NA	NA	NA	NA	NA	NA	NA	NA	121756982	121734838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121737026_121737257_121737336_121737951_121738096_121742316_121742490_121743605_121743765_121745225_121745317_121745422_121745561_121745958_121746100_121747828_121748230_121752122_121752323_121756833
ENSMUSG00000042650.4_0	chr11	+	5705	4	FSM	ENSMUSG00000042650.4	ENSMUST00000044250.4	5730	4	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAATTAATTTCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	60428817	60449327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60430022_60438513_60438595_60444539_60444696_60445063
ENSMUSG00000042660.9_0	chr18	+	1602	7	FSM	ENSMUSG00000042660.9	ENSMUST00000049323.9	1619	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGTAAGCTCTGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	36893280	36896854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36893534_36895029_36895131_36895218_36895307_36895407_36895588_36895710_36895811_36895901_36896072_36896144
ENSMUSG00000042662.17_0	chr2	-	1039	7	FSM	ENSMUSG00000042662.17	ENST00000375966.8	1052	7	1	12	1	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACACAGAAGTTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152793579	152784804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152785374_152786070_152786243_152787346_152787422_152788207_152788258_152790957_152791041_152792540_152792575_152793523
ENSMUSG00000042662.17_1	chr2	-	980	6	ISM	ENSMUSG00000042662.17	ENST00000375966.8	1052	7	1007	14	803	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACACAGAAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	152792573	152784806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_152785374_152786070_152786243_152787346_152787422_152788207_152788258_152790957_152791041_152792540
ENSMUSG00000042662.17_2	chr2	-	947	5	ISM	ENSMUSG00000042662.17	ENST00000375966.8	1052	7	2539	15	2335	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAGACACAGAAGTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	152791041	152784807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_152785374_152786070_152786243_152787346_152787422_152788207_152788258_152790957
ENSMUSG00000042662.17_3	chr2	-	495	6	FSM	ENSMUSG00000042662.17	ENST00000278979.7	507	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTAGGGGCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	152793609	152786075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152786243_152787346_152787422_152788207_152788258_152790957_152791041_152792540_152792575_152793523
ENSMUSG00000042662.17_4	chr2	-	409	5	ISM	ENSMUSG00000042662.17	ENST00000278979.7	507	6	1041	6	802	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTAGGGGCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	152792574	152786075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_152786243_152787346_152787422_152788207_152788258_152790957_152791041_152792540
ENSMUSG00000042670.6_0	chr2	+	939	7	FSM	ENSMUSG00000042670.6	ENSMUST00000037499.6	955	7	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATCCAGATGACTATC	NA	NA	NA	NA	NA	NA	NA	NA	105734989	105795894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105735076_105738668_105738775_105761063_105761198_105763609_105763699_105767336_105767464_105794524_105794636_105795608
ENSMUSG00000042670.6_3	chr2	+	382	3	FSM	ENSMUSG00000042670.6	ENST00000526776.5	395	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTTTATTTATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	105761076	105795758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_105761198_105794524_105794636_105795608
ENSMUSG00000042671.13_0	chr1	+	1407	7	FSM	ENSMUSG00000042671.13	ENST00000483095.6	1415	7	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATAGGGAGTCTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	153541385	153569259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_153541460_153541581_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042671.13_7	chr1	+	1333	6	FSM	ENSMUSG00000042671.13	ENSMUST00000111810.2	5614	6	126	4155	126	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAATAGGGAGTCTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	153541580	153569258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_153541663_153543570_153543700_153546528_153546631_153547499_153547565_153566643_153566811_153568470
ENSMUSG00000042672.16_0	chr3	-	1936	14	FSM	ENSMUSG00000042672.16	ENST00000423025.6	1952	14	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2056	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGTGTATGGCGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	89271613	89257589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89257822_89259773_89259888_89260009_89260153_89260572_89260690_89260821_89260949_89261104_89261201_89261397_89261498_89263543_89263705_89264124_89264247_89264779_89264924_89265025_89265234_89265868_89266009_89266381_89266511_89271510
ENSMUSG00000042675.16_0	chr7	+	955	5	FSM	ENSMUSG00000042675.16	ENSMUST00000038614.12	973	5	8	10	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGACAGCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126376134	126379676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126376276_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUSG00000042675.16_1	chr7	+	1033	5	FSM	ENSMUSG00000042675.16	ENSMUST00000170882.8	1050	5	10	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGACAGCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126376156	126379676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126376376_126376942_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUSG00000042675.16_2	chr7	+	1576	4	FSM	ENSMUSG00000042675.16	ENSMUST00000106357.8	1594	4	8	10	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGACAGCCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	126376180	126379676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126377126_126377225_126377270_126377477_126377587_126379198
ENSMUSG00000042678.18_1	chr11	+	2309	22	FSM	ENSMUSG00000042678.18	ENST00000644795.1	2321	22	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGTGAGTGACGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	60396806	60415326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60396910_60397116_60397177_60397667_60397744_60398059_60398176_60398260_60398380_60399017_60399160_60399715_60399828_60399903_60399979_60400359_60400539_60400757_60400874_60401052_60401126_60401394_60401468_60401680_60401755_60401950_60402034_60405724_60405856_60407973_60408069_60408286_60408365_60409213_60409311_60411577_60411739_60412451_60412586_60414829_60414964_60415248
ENSMUSG00000042680.9_0	chr18	-	3734	6	FSM	ENSMUSG00000042680.9	ENSMUST00000049260.7	4923	6	1	1188	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATCCACTGAGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	21433194	21261445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_21263080_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ENSMUSG00000042680.9_1	chr18	-	3723	6	FSM	ENSMUSG00000042680.9	ENST00000269209.7	3739	6	11	5	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTATAATATCCACTGAG	NA	NA	NA	NA	NA	NA	NA	NA	21433185	21261450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_21263083_21264389_21264557_21280788_21281962_21301792_21301924_21369057_21369199_21432706
ENSMUSG00000042682.11_0	chr14	+	1663	5	FSM	ENSMUSG00000042682.11	ENSMUST00000112268.4	1678	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2246	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGGTGACTACATAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	29690274	29697614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_29690494_29691982_29692074_29693744_29693829_29695317_29695405_29696432
ENSMUSG00000042684.9_0	chr1	-	881	9	FSM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAACCCATCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	153413245	153379045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153379304_153384857_153384898_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173
ENSMUSG00000042684.9_1	chr1	-	808	8	ISM	ENSMUSG00000042684.9	ENST00000614468.1	892	9	1544	8	1544	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTGAACCCATCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	153411704	153379045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_153379304_153384857_153384898_153390985_153391033_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617
ENSMUSG00000042684.9_22	chr1	-	566	7	FSM	ENSMUSG00000042684.9	ENST00000367552.6	579	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTAGGTGAGTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	153413242	153384864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153384898_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617_153411706_153413173
ENSMUSG00000042684.9_23	chr1	-	495	6	ISM	ENSMUSG00000042684.9	ENST00000367552.6	579	7	1545	7	1545	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTAGGTGAGTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	153411703	153384864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_153384898_153391147_153391297_153394628_153394722_153400092_153400169_153403810_153403869_153411617
ENSMUSG00000042688.17_0	chr9	-	4183	6	FSM	ENSMUSG00000042688.17	ENST00000680652.1	4198	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTAGAAGGAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75317261	75294054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317138
ENSMUSG00000042688.17_1	chr9	-	4181	6	FSM	ENSMUSG00000042688.17	ENST00000680777.1	4197	6	10	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTAGAAGGAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75317279	75294054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317158
ENSMUSG00000042688.17_3	chr9	-	4229	6	FSM	ENSMUSG00000042688.17	ENST00000681888.1	4247	6	12	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTAGAAGGAAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	75317299	75294054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75296430_75297448_75297651_75300646_75300812_75302791_75302937_75304860_75306034_75317130
ENSMUSG00000042694.18_0	chr19	-	2028	9	FSM	ENSMUSG00000042694.18	ENST00000224950.8	2036	9	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGCCTTTGACGTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	47524788	47489101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47490157_47496244_47496318_47498773_47498891_47502243_47502422_47504529_47504654_47505465_47505628_47513125_47513195_47517075_47517172_47524634
ENSMUSG00000042694.18_3	chr19	-	1978	10	FSM	ENSMUSG00000042694.18	ENSMUST00000049369.16	1992	10	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCAATTCATTTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	47525549	47489476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47490157_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUSG00000042694.18_7	chr19	-	1599	10	FSM	ENSMUSG00000042694.18	ENSMUST00000182808.8	1618	10	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGAGTCTGTATGAACT	NA	NA	NA	NA	NA	NA	NA	NA	47525459	47495646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47496038_47496244_47496318_47498773_47498897_47502249_47502422_47504529_47504654_47505465_47505634_47513125_47513195_47517075_47517172_47524634_47524811_47525252
ENSMUSG00000042699.12_31	chr1	-	1000	8	FSM	ENSMUSG00000042699.12	ENST00000532521.2	1019	8	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGGTAAATTTCTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	153345476	153338301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153338451_153340085_153340160_153340363_153340455_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345
ENSMUSG00000042699.12_6	chr1	-	1020	5	FSM	ENSMUSG00000042699.12	ENST00000533748.1	1033	5	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGAAGTGTAAGGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	153336129	153333290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153333478_153333798_153334236_153335083_153335212_153335303_153335466_153336023
ENSMUSG00000042699.12_8	chr1	-	3087	24	FSM	ENSMUSG00000042699.12	ENST00000436565.2	3103	24	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGCCAAGACATGAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	153359586	153334056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153334236_153335083_153335212_153335303_153335466_153336023_153336136_153336727_153336889_153338297_153338451_153340085_153340160_153340363_153340459_153340600_153340815_153341422_153341524_153342777_153342935_153344619_153344703_153345345_153345488_153347365_153347558_153347973_153348050_153348146_153348309_153348417_153348508_153348892_153349030_153351408_153351456_153353786_153353936_153354611_153354725_153356877_153356996_153358487_153358629_153359485
ENSMUSG00000042700.17_0	chr12	+	8211	23	FSM	ENSMUSG00000042700.17	ENSMUST00000166429.9	8215	23	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGATTGGTTATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	82216193	82498556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_82216851_82281236_82281303_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ENSMUSG00000042700.17_1	chr12	+	6176	24	FSM	ENSMUSG00000042700.17	ENSMUST00000222298.2	6179	24	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGAATGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	82216799	82497045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_82216851_82281236_82281303_82312730_82312800_82358122_82358184_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496179_82496674
ENSMUSG00000042700.17_12	chr12	+	7459	21	FSM	ENSMUSG00000042700.17	ENST00000555818.5	7479	21	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGCTCCATTAACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	82387550	82498637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82468743_82468807_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496080_82496166_82496674
ENSMUSG00000042700.17_5	chr12	+	6564	21	FSM	ENSMUSG00000042700.17	ENST00000358550.6	6578	21	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCTCAAATGTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	82386230	82497037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_82386887_82387435_82389274_82404006_82404138_82409716_82409906_82419141_82419317_82431424_82431529_82434328_82434487_82442966_82443541_82444119_82444395_82449683_82449954_82463677_82463825_82467311_82467437_82469148_82469268_82471786_82472230_82479526_82479767_82480462_82480629_82484461_82484709_82487588_82487736_82493590_82493706_82496083_82496166_82496674
ENSMUSG00000042705.10_0	chr18	+	1590	7	FSM	ENSMUSG00000042705.10	ENSMUST00000049388.9	1610	7	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTTAAACTCAAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	47091891	47221051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47219318_47219379_47220094
ENSMUSG00000042705.10_7	chr18	+	780	6	FSM	ENSMUSG00000042705.10	ENSMUST00000234961.2	792	6	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCATTTAAAATAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	47091928	47168863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_47091996_47093482_47093574_47096726_47096838_47100806_47100963_47123545_47123657_47168619
ENSMUSG00000042709.16_2	chr11	-	1801	8	FSM	ENSMUSG00000042709.16	ENSMUST00000108721.9	1813	8	0	12	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTGAATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	60307877	60291463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60292365_60294662_60294779_60295205_60295319_60296601_60296683_60298119_60298218_60300085_60300232_60300411_60300457_60307576
ENSMUSG00000042712.11_0	chrX	+	991	3	FSM	ENSMUSG00000042712.11	ENSMUST00000048687.11	1019	3	11	17	11	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	3214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAACTAAAAATAAGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	135145838	135147871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135145977_135146449_135146516_135147084
ENSMUSG00000042719.18_0	chr5	+	5432	24	FSM	ENSMUSG00000042719.18	ENSMUST00000042163.15	5447	24	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTATCTGCAGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121536007	121580466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121536126_121545255_121545342_121546259_121546399_121547148_121547268_121551069_121551145_121552551_121552660_121552864_121552944_121555439_121555552_121555989_121556080_121558525_121558696_121559353_121559467_121561597_121561806_121562576_121562667_121564033_121564215_121564789_121564890_121568667_121568820_121569522_121569649_121572888_121573133_121573522_121573647_121574721_121574788_121575670_121575769_121576790_121576902_121577397_121577545_121577890
ENSMUSG00000042726.15_0	chr5	-	2487	12	FSM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	8	8	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGCTTGTGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	121523687	121509795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ENSMUSG00000042726.15_1	chr5	-	2391	11	ISM	ENSMUSG00000042726.15	ENSMUST00000042312.14	2503	12	1526	6	1465	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTGTGATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121522169	121509793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_121510476_121510665_121510739_121511200_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102
ENSMUSG00000042726.15_6	chr5	-	2418	12	FSM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGCTCAGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	121523634	121509799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102_121522168_121523587
ENSMUSG00000042726.15_8	chr5	-	2362	11	ISM	ENSMUSG00000042726.15	ENSMUST00000120784.8	2425	12	1476	7	1476	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGAGCTCAGCTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	121522158	121509799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_121510476_121510665_121510739_121511212_121511538_121512009_121512131_121513078_121513310_121513858_121513936_121515800_121516008_121516558_121516965_121517478_121517533_121517608_121517745_121522102
ENSMUSG00000042729.12_0	chr19	+	1199	11	FSM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	0	5	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTGGACCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	8713202	8717983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUSG00000042729.12_2	chr19	+	1118	10	FSM	ENSMUSG00000042729.12	ENST00000311713.11	1124	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCCCAACGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	8713205	8717962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8713270_8713350_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717765
ENSMUSG00000042729.12_3	chr19	+	1050	9	ISM	ENSMUSG00000042729.12	ENST00000311713.11	1124	10	149	6	149	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATAGCCCAACGCGCG	NA	NA	NA	NA	NA	NA	NA	NA	8713354	8717962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717765
ENSMUSG00000042729.12_4	chr19	+	1131	10	ISM	ENSMUSG00000042729.12	ENSMUST00000049424.11	1204	11	149	5	146	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGATCCTGGACCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	8713351	8717983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8713458_8713539_8713662_8715017_8715094_8715211_8715359_8715516_8715619_8716629_8716731_8716810_8716867_8717182_8717329_8717459_8717517_8717765
ENSMUSG00000042734.7_0	chr12	+	4715	4	FSM	ENSMUSG00000042734.7	ENSMUST00000218362.2	4754	4	33	6	33	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAATTTGTTCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	81678055	81714325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_81678576_81707339_81707523_81710289_81711211_81711234
ENSMUSG00000042737.10_0	chr3	+	821	3	FSM	ENSMUSG00000042737.10	ENSMUST00000107462.8	827	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTAGTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89166670	89174384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89166899_89173669_89173914_89174035
ENSMUSG00000042737.10_1	chr3	+	401	2	FSM	ENSMUSG00000042737.10	ENSMUST00000040824.2	404	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAATCTTGTGTAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	89173858	89174381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89173914_89174035
ENSMUSG00000042737.10_2	chr3	+	339	1	ISM	ENSMUSG00000042737.10	ENSMUST00000107462.8	827	3	7381	0	187	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTGTGTAGTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	89174045	89174384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_89174000_89174400
ENSMUSG00000042742.8_0	chr6	-	4123	5	FSM	ENSMUSG00000042742.8	ENSMUST00000045235.8	4143	5	16	4	-12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTTGTCTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13677949	13625675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13629100_13630588_13630704_13641685_13641857_13663200_13663343_13677678
ENSMUSG00000042743.14_0	chr13	+	3041	11	FSM	ENSMUSG00000042743.14	ENSMUST00000044385.14	3048	11	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCACAGATTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	104246249	104278237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104246478_104247577_104247698_104254831_104254936_104257974_104258045_104260697_104260798_104265736_104265842_104268444_104268584_104268673_104268737_104271111_104271150_104271347_104271432_104276247
ENSMUSG00000042744.17_1	chr5	+	15462	76	FSM	ENSMUSG00000042744.17	ENSMUST00000042614.13	15482	76	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAAGAGTCTGTGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	121358293	121506632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430916_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440699_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ENSMUSG00000042744.17_21	chr5	+	15230	76	FSM	ENSMUSG00000042744.17	ENST00000550722.5	15239	76	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTGACTGACCTAAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	121358588	121506659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121358721_121391923_121392442_121396761_121396852_121397867_121397999_121400561_121400671_121401947_121402087_121404297_121404469_121411669_121411863_121415737_121415897_121419118_121419233_121419866_121420008_121424292_121424526_121424782_121424929_121427629_121427701_121429257_121429364_121430111_121430233_121430792_121430922_121433437_121433563_121435165_121435320_121436121_121436223_121437507_121437707_121439831_121439952_121440669_121440805_121441594_121441759_121442280_121442515_121443734_121443928_121444063_121444169_121445004_121445094_121445409_121445586_121446312_121446449_121446555_121446698_121446792_121446960_121448603_121448751_121449685_121449871_121451936_121452091_121452930_121453212_121453379_121453570_121455264_121455347_121456625_121456829_121458027_121458164_121459460_121459644_121460254_121460420_121460698_121460869_121461980_121462097_121463253_121463358_121466147_121466310_121466425_121466575_121467127_121467208_121467520_121467685_121469738_121469977_121470984_121471122_121471485_121471613_121472399_121472538_121474652_121474790_121477487_121477649_121479935_121480118_121480712_121480919_121481155_121481287_121481541_121481748_121482745_121482926_121486481_121487789_121488492_121488701_121491553_121491778_121491876_121492029_121493625_121493733_121494265_121494390_121496206_121496398_121497359_121497507_121498167_121498288_121498694_121498851_121500503_121500608_121500780_121501003_121501805_121501970_121502598_121502795_121502929_121503153_121504531
ENSMUSG00000042745.10_0	chr2	+	918	2	FSM	ENSMUSG00000042745.10	ENSMUST00000038368.9	934	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAACGTTGCTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	152578180	152579324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152578666_152578891
ENSMUSG00000042745.10_1	chr2	+	1136	1	FSM	ENSMUSG00000042745.10	ENSMUST00000109824.2	1160	1	18	6	18	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATAACGTTGCTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	152578188	152579324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152578200_152579300
ENSMUSG00000042747.13_0	chr3	+	1160	5	FSM	ENSMUSG00000042747.13	ENSMUST00000040888.12	1172	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACCTAACTGGTGTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	89153284	89157213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89153823_89154084_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUSG00000042747.13_2	chr3	+	557	5	FSM	ENSMUSG00000042747.13	ENSMUST00000168900.3	582	5	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTAATAAAGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	89153752	89157003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89153901_89154087_89154240_89154371_89154436_89156380_89156448_89156877
ENSMUSG00000042747.13_5	chr3	+	428	4	FSM	ENSMUSG00000042747.13	ENST00000497317.5	438	4	9	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTCTGTGAACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89154098	89157029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89154240_89154371_89154436_89156380_89156452_89156877
ENSMUSG00000042751.15_0	chr1	+	4610	11	FSM	ENSMUSG00000042751.15	ENSMUST00000043313.15	4626	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTAGAGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	152830757	152995000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_152830945_152949542_152949632_152950418_152950487_152952654_152952734_152962082_152962210_152964529_152964611_152966242_152966288_152969782_152969860_152987887_152987990_152988125_152988194_152991313
ENSMUSG00000042757.17_0	chr9	-	2065	3	FSM	ENSMUSG00000042757.17	ENST00000508711.5	2073	3	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACCCAGAGGACCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103486993	103360156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_103361983_103366387_103366543_103486909
ENSMUSG00000042757.17_1	chr9	-	1976	2	ISM	ENSMUSG00000042757.17	ENST00000508711.5	2073	3	120455	9	120455	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTACCCAGAGGACC	NA	NA	NA	NA	NA	NA	NA	NA	103366542	103360161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_103361983_103366387
ENSMUSG00000042766.18_0	chr3	-	3062	10	FSM	ENSMUSG00000042766.18	ENST00000368382.5	3075	10	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCCTGGAGTGAGACCA	NA	NA	NA	NA	NA	NA	NA	NA	89153129	89141478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89142600_89143609_89143908_89144923_89145227_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890_89151235_89151456_89151719_89153011
ENSMUSG00000042766.18_1	chr3	-	2914	9	FSM	ENSMUSG00000042766.18	ENST00000545012.5	2926	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGGAGTGAGACCAT	NA	NA	NA	NA	NA	NA	NA	NA	89153252	89141477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89142600_89143609_89143908_89144923_89145227_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890_89151235_89153021
ENSMUSG00000042766.18_13	chr3	-	1685	9	FSM	ENSMUSG00000042766.18	ENST00000543729.5	1703	9	18	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTACACAGACAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	89153142	89144922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89145227_89145972_89146011_89146204_89146327_89146577_89146832_89149473_89149570_89149681_89149826_89150890_89151235_89151456_89151719_89153021
ENSMUSG00000042770.9_0	chr6	-	1037	4	FSM	ENSMUSG00000042770.9	ENSMUST00000045855.9	1058	4	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGTGGAGACAGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	135145199	135114526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_135115062_135129818_135130000_135132148_135132288_135145017
ENSMUSG00000042772.16_0	chr1	-	5760	22	FSM	ENSMUSG00000042772.16	ENSMUST00000073441.13	5767	22	2	5	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152778371	152712750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152778259
ENSMUSG00000042772.16_1	chr1	-	5781	23	FSM	ENSMUSG00000042772.16	ENSMUST00000043560.15	5792	23	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGATCGGTGTGTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	152753912	152712750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724484_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152746510_152746543_152753791
ENSMUSG00000042772.16_6	chr1	-	3945	22	FSM	ENSMUSG00000042772.16	ENST00000508461.5	3962	22	7	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGAGAAGGGAAGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	152778396	152714708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152715137_152715785_152715932_152716052_152716224_152716775_152716936_152717263_152717345_152718980_152719131_152719786_152720159_152720963_152721347_152721869_152722015_152724346_152724768_152725625_152725746_152728348_152728410_152730060_152730132_152731599_152731754_152732199_152732363_152734629_152734766_152735102_152735254_152736200_152736273_152737431_152737604_152742331_152742465_152744002_152744121_152778259
ENSMUSG00000042784.10_0	chr3	+	2229	7	FSM	ENSMUSG00000042784.10	ENSMUST00000041142.4	2242	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATGCCAGCTGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	89136371	89140683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89136485_89137217_89138522_89138619_89138673_89138807_89138942_89139069_89139192_89139272_89139423_89140330
ENSMUSG00000042787.16_0	chr9	+	3820	6	FSM	ENSMUSG00000042787.16	ENSMUST00000035094.14	3832	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGTGATTGGCCACAGTG	NA	NA	NA	NA	NA	NA	NA	NA	119274020	119294583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119274217_119276014_119276165_119277454_119277595_119278843_119278921_119281293_119281409_119291441
ENSMUSG00000042790.17_0	chr9	-	3277	15	FSM	ENSMUSG00000042790.17	ENSMUST00000161203.8	3294	15	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGAATGGCCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	45818156	45774728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45818035
ENSMUSG00000042790.17_1	chr9	-	3943	14	FSM	ENSMUSG00000042790.17	ENSMUST00000058720.13	3964	14	13	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAATTCTTTTCTCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	45818162	45774814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817649
ENSMUSG00000042790.17_10	chr9	-	2660	15	FSM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGGGGAACAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45817639	45775731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103_45816218_45817597
ENSMUSG00000042790.17_8	chr9	-	2842	14	FSM	ENSMUSG00000042790.17	ENSMUST00000161187.8	2847	14	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGAGAAAAAATGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	45817705	45774993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45776297_45777863_45777960_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811508_45811555_45816103_45816218_45817649
ENSMUSG00000042790.17_9	chr9	-	2613	14	ISM	ENSMUSG00000042790.17	ENST00000531452.5	2667	15	1427	7	1427	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAGGGGAACAAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	45816212	45775731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_45776297_45777863_45777960_45778244_45778350_45778797_45778931_45779036_45779414_45780476_45780576_45780751_45780843_45782843_45782933_45783168_45783266_45802101_45802242_45807382_45807524_45809729_45809790_45811043_45811555_45816103
ENSMUSG00000042797.10_0	chr7	-	3696	3	FSM	ENSMUSG00000042797.10	ENSMUST00000206389.2	3737	3	27	14	27	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAAAGAAAGAAATTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	97387469	97373226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_97375912_97378177_97378295_97386575
ENSMUSG00000042804.14_0	chr4	+	3834	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105650.8	3838	6	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCTTCTGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152358691	152369793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367383
ENSMUSG00000042804.14_1	chr4	+	3776	6	FSM	ENSMUSG00000042804.14	ENSMUST00000105651.8	3777	6	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATCCTTCTGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	152358818	152369793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152358840_152363469_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367314
ENSMUSG00000042804.14_2	chr4	+	3747	5	FSM	ENSMUSG00000042804.14	ENSMUST00000055754.8	3757	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTGCACACATCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	152363468	152369784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152363938_152364301_152364732_152366222_152366416_152366827_152367013_152367314
ENSMUSG00000042807.16_0	chr1	-	6819	28	FSM	ENSMUSG00000042807.16	ENST00000644030.1	6836	28	12	5	12	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	3153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGCAAACTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	54079677	53850342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53852493_53866034_53866148_53867043_53867130_53869800_53869916_53870668_53870816_53871780_53871911_53878170_53878270_53879872_53880026_53890731_53890846_53892327_53892449_53904199_53904310_53907994_53908079_53924487_53924585_53926741_53926845_53930284_53930420_53943407_53943594_53952399_53952525_53952925_53953030_53953640_53953792_53963057_53963154_53964468_53965861_53966223_53966325_53970128_53970269_53972277_53972448_53976216_53976293_53981864_53981960_53989972_53990081_54079359
ENSMUSG00000042810.15_2	chr6	+	2187	14	FSM	ENSMUSG00000042810.15	ENST00000496259.5	2202	14	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3909	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGCCTGGAGTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	48379825	48390435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48379945_48380311_48380432_48380924_48381075_48382170_48382324_48383233_48383366_48383767_48383942_48384606_48384757_48385462_48385661_48386103_48386278_48386651_48386829_48388575_48388729_48389207_48389361_48390011_48390207_48390296
ENSMUSG00000042814.9_0	chr2	+	891	1	FSM	ENSMUSG00000042814.9	ENSMUST00000062148.9	912	1	7	14	7	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACCTTTAAAAAACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	152528961	152529852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152529000_152529900
ENSMUSG00000042821.8_0	chr2	+	1601	3	FSM	ENSMUSG00000042821.8	ENSMUST00000052631.8	1621	3	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACTAAAAAGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	167380122	167384722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167380292_167380590_167381119_167383818
ENSMUSG00000042826.14_0	chr11	-	2513	6	FSM	ENSMUSG00000042826.14	ENSMUST00000011285.11	2534	6	14	7	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGGAGTGTTATCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	69692528	69686900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69688706_69688990_69689099_69689389_69689505_69690177_69690282_69690491_69690603_69692258
ENSMUSG00000042826.14_1	chr11	-	921	5	FSM	ENSMUSG00000042826.14	ENST00000575235.5	929	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTAGATCCTGGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	69693747	69688835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69689099_69689389_69689589_69690177_69690282_69690491_69690603_69693503
ENSMUSG00000042831.14_0	chr7	+	964	7	FSM	ENSMUSG00000042831.14	ENSMUST00000060834.12	982	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTACTCGTTTTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	30008152	30013722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30008260_30008905_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012015_30012133_30013343
ENSMUSG00000042831.14_11	chr7	+	627	5	ISM	ENSMUSG00000042831.14	ENST00000485128.5	703	6	496	6	496	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTTCTAAGACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30009410	30013609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013343
ENSMUSG00000042831.14_6	chr7	+	696	6	FSM	ENSMUSG00000042831.14	ENST00000485128.5	703	6	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTTCTAAGACCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	30008915	30013609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30008985_30009410_30009480_30011264_30011326_30011661_30011814_30012053_30012133_30013343
ENSMUSG00000042834.16_0	chr18	-	2165	5	FSM	ENSMUSG00000042834.16	ENSMUST00000168890.2	2185	5	11	9	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGTAACTGTGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	33597071	33570080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33596905
ENSMUSG00000042834.16_3	chr18	-	559	5	FSM	ENSMUSG00000042834.16	ENST00000453526.6	565	5	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCATTCTGACTCAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33596672	33571588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596467_33596598
ENSMUSG00000042834.16_5	chr18	-	473	4	FSM	ENSMUSG00000042834.16	ENSMUST00000051087.16	659	4	325	-139	21	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACCAGTTTTTAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	33596467	33571601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430
ENSMUSG00000042834.16_8	chr18	-	517	5	FSM	ENSMUSG00000042834.16	ENST00000455559.6	527	5	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAAGCCTGGCTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	33597284	33571648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_33571893_33575868_33575947_33595073_33595141_33596430_33596473_33597198
ENSMUSG00000042842.12_0	chr13	+	2174	7	FSM	ENSMUSG00000042842.12	ENSMUST00000110293.9	2193	7	14	5	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33149205	33163045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33149527_33152482_33152658_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042842.12_2	chr13	+	1719	6	FSM	ENSMUSG00000042842.12	ENSMUST00000164541.2	1719	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATGTCTTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	33149485	33163045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33149527_33155453_33155607_33156229_33156348_33158879_33159023_33161507_33161664_33161937
ENSMUSG00000042851.18_0	chr2	+	4898	12	FSM	ENSMUSG00000042851.18	ENSMUST00000110320.9	4916	12	10	8	3	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCACACGACTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	128809331	128860475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128839524_128839793_128844061_128844199_128847915_128848033_128848632_128848745_128852335_128852446_128853586_128853841_128856255_128856759_128857319_128857554_128858041
ENSMUSG00000042851.18_1	chr2	+	1474	4	FSM	ENSMUSG00000042851.18	ENSMUST00000110319.3	1484	4	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATCAGGTTTACTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128809333	128836045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_128809757_128833010_128833192_128835078_128835202_128835298
ENSMUSG00000042854.10_0	chr2	+	4404	2	FSM	ENSMUSG00000042854.10	ENSMUST00000151826.2	4426	2	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAAAACCAAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	166635697	166641414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166635989_166637301
ENSMUSG00000042870.16_0	chr8	+	2251	15	FSM	ENSMUSG00000042870.16	ENSMUST00000165630.3	2267	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	594	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGATCTGCTCTGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	75760342	75796743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_75760456_75774620_75774706_75776817_75776897_75778135_75778286_75778550_75778686_75778777_75778925_75781204_75781322_75783782_75783917_75785068_75785103_75785440_75785535_75787060_75787182_75791021_75791098_75794149_75794210_75795723_75795764_75795877
ENSMUSG00000042873.12_1	chr6	-	2187	4	FSM	ENSMUSG00000042873.12	ENST00000287585.8	2197	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGTGTATGTGTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	113172302	113147666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113148920_113153406_113153644_113170778_113171349_113172175
ENSMUSG00000042874.3_0	chr13	-	2426	1	FSM	ENSMUSG00000042874.3	ENSMUST00000238724.2	2459	1	26	7	26	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTAATGTGACGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	32987048	32984622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_32984600_32987000
ENSMUSG00000042888.11_0	chr14	-	1903	2	FSM	ENSMUSG00000042888.11	ENST00000335524.7	1919	2	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAATAAAGCCTAACTCC	NA	NA	NA	NA	NA	NA	NA	NA	101437794	101435155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101436922_101437657
ENSMUSG00000042901.11_0	chr1	+	4261	10	FSM	ENSMUSG00000042901.11	ENSMUST00000109166.8	4279	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATATATACTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	183078602	183106323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_183079173_183085612_183085683_183087358_183087413_183087819_183087875_183094595_183094660_183094913_183095018_183097514_183097638_183099746_183099870_183103138_183103257_183103343
ENSMUSG00000042903.9_0	chrX	+	1329	3	FSM	ENSMUSG00000042903.9	ENST00000341558.3	1345	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGTATAGCACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100298436	100302833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100298598_100298762_100298880_100301782
ENSMUSG00000042909.5_0	chr7	-	2929	2	FSM	ENSMUSG00000042909.5	ENSMUST00000216612.3	2929	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTCTGTCTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103832599	103826804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103829637_103832502
ENSMUSG00000042918.18_0	chr7	+	1238	9	FSM	ENSMUSG00000042918.18	ENST00000318083.11	1242	9	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCTTGGGTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45290186	45294412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45290264_45291201_45291245_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_12	chr7	+	1162	8	ISM	ENSMUSG00000042918.18	ENST00000318083.11	1242	9	1017	1	220	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCTTGGGTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45291200	45294412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45291245_45291748_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042918.18_7	chr7	+	1501	8	FSM	ENSMUSG00000042918.18	ENST00000356751.8	1511	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCCTTGGGTCTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	45290989	45294412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45291245_45291620_45291889_45292171_45292354_45292660_45292749_45292920_45293130_45293691_45293853_45293942_45293998_45294129
ENSMUSG00000042961.14_0	chr15	-	2010	12	FSM	ENSMUSG00000042961.14	ENST00000397202.6	2028	12	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAATAAATGTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7279651	7236554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_7236751_7236801_7237284_7237982_7238087_7241611_7241696_7249105_7249250_7252228_7252308_7261068_7261250_7263665_7263783_7267217_7267330_7271882_7272127_7273263_7273390_7279510
ENSMUSG00000042961.14_1	chr15	-	3472	23	FSM	ENSMUSG00000042961.14	ENST00000354891.7	3494	23	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAATAAATGTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	7347823	7236554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_7236751_7236801_7237284_7237982_7238087_7241611_7241696_7249105_7249250_7252228_7252308_7254125_7254150_7261068_7261250_7263665_7263783_7267217_7267330_7271882_7272127_7273263_7273390_7276480_7276671_7279510_7279656_7280674_7280776_7281886_7281988_7282908_7283228_7283909_7284026_7319264_7319432_7333405_7333542_7334582_7334701_7345879_7345964_7347721
ENSMUSG00000042978.12_0	chr7	+	1502	4	FSM	ENSMUSG00000042978.12	ENST00000671413.3	1512	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCTGCAGCGCAGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	125848042	125891820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_125848285_125889028_125889262_125890214_125890418_125890996
ENSMUSG00000042988.11_0	chr11	-	2180	11	FSM	ENSMUSG00000042988.11	ENSMUST00000106177.8	2212	11	5	27	5	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAACAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120551427	120544640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120545353_120545589_120545638_120546589_120546738_120547157_120547259_120547385_120547578_120548318_120548422_120548711_120548771_120549156_120549218_120549475_120549572_120549650_120549704_120550820
ENSMUSG00000042992.16_0	chr6	+	1749	4	FSM	ENSMUSG00000042992.16	ENSMUST00000062755.10	1764	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCTAAACTTGATCTGA	NA	NA	NA	NA	NA	NA	NA	NA	134617910	134688143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134618221_134621291_134621436_134662926_134663085_134687006
ENSMUSG00000042992.16_5	chr6	+	555	4	FSM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCACTAGCAGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	134617952	134687223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134617989_134621291_134621436_134662926_134663085_134687006
ENSMUSG00000042992.16_8	chr6	+	508	3	ISM	ENSMUSG00000042992.16	ENST00000542728.5	558	4	3350	3	3350	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCACTAGCAGGCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	134621302	134687223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_134621436_134662926_134663085_134687006
ENSMUSG00000042997.14_0	chr3	-	5030	7	FSM	ENSMUSG00000042997.14	ENSMUST00000056749.14	5047	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAAAATTTATTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	53370745	53356012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53365905_53366107_53369052_53369201_53369732_53369886_53370480
ENSMUSG00000042997.14_3	chr3	-	683	5	FSM	ENSMUSG00000042997.14	ENST00000379599.6	707	5	6	18	6	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACAAATACAAAAATACA	NA	NA	NA	NA	NA	NA	NA	NA	53369867	53359875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_53360071_53360962_53361076_53363846_53363939_53369052_53369201_53369732
ENSMUSG00000043004.14_0	chr14	-	3807	4	FSM	ENSMUSG00000043004.14	ENSMUST00000160013.8	3826	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATTTCCTACGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	20027305	19922633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_19926004_19941353_19941470_20010721_20010763_20027025
ENSMUSG00000043015.16_0	chr1	+	3365	9	FSM	ENSMUSG00000043015.16	ENSMUST00000165859.8	3396	9	24	7	24	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTTCCCTGGGCTCCGA	NA	NA	NA	NA	NA	NA	NA	NA	52669885	52691071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52670011_52676523_52676640_52679987_52680220_52680329_52680403_52681477_52681572_52682280_52682396_52684419_52684646_52687908_52688086_52688864
ENSMUSG00000043017.10_0	chr7	+	3267	2	FSM	ENSMUSG00000043017.10	ENSMUST00000144408.2	3305	2	25	13	25	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGTGAAAAAATAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	16640463	16644812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16641562_16642643
ENSMUSG00000043019.13_0	chr1	+	6315	20	FSM	ENSMUSG00000043019.13	ENSMUST00000059498.12	6327	20	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGGTCTAGTTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	151631131	151697797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151631479_151635488_151635535_151646582_151646684_151647160_151647201_151651607_151651721_151653156_151653311_151658123_151658259_151660489_151660596_151668078_151668177_151670426_151670553_151670730_151670815_151671816_151671901_151672533_151672659_151680028_151680195_151680415_151680571_151681600_151681755_151683116_151683309_151683954_151684121_151687269_151687456_151694060
ENSMUSG00000043029.3_0	chr11	+	2415	17	FSM	ENSMUSG00000043029.3	ENST00000572519.1	2427	17	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATGGTGTGGGGTCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	73158371	73187651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73158489_73160485_73160607_73168553_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020_73186296_73187254_73187368_73187553
ENSMUSG00000043029.3_2	chr11	+	2493	18	FSM	ENSMUSG00000043029.3	ENST00000301365.8	2506	18	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCCTGGCTTAAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	73158371	73188024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73158489_73160485_73160607_73168553_73168659_73168765_73168853_73169741_73169897_73170587_73170765_73172499_73172641_73174418_73174700_73176687_73176865_73178176_73178336_73178993_73179096_73180060_73180135_73182394_73182561_73184758_73184826_73186020_73186296_73187254_73187368_73187553_73187634_73187928
ENSMUSG00000043059.17_0	chr5	-	2205	4	FSM	ENSMUSG00000043059.17	ENSMUST00000114590.8	2228	4	10	13	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACTAACAGAGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	31359637	31356337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31357492_31357578_31358167_31358926_31359083_31359330
ENSMUSG00000043059.17_1	chr5	-	2177	3	FSM	ENSMUSG00000043059.17	ENSMUST00000031562.11	2213	3	20	16	20	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAACACTAACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	31359366	31356342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31357492_31357578_31358167_31358926
ENSMUSG00000043061.11_0	chr12	+	2963	5	FSM	ENSMUSG00000043061.11	ENSMUST00000057151.10	2971	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATATACAGTGTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30634430	30641212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_30634562_30635468_30635590_30637198_30637254_30638472_30638567_30638650
ENSMUSG00000043065.13_0	chr16	+	4620	18	FSM	ENSMUSG00000043065.13	ENSMUST00000050897.7	4627	18	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGTGTGGCCCCCGTAG	NA	NA	NA	NA	NA	NA	NA	NA	44167485	44208855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44167870_44175802_44175899_44176507_44176556_44178122_44178267_44185946_44186050_44186895_44187003_44187995_44188112_44190242_44190383_44190600_44190742_44191042_44191309_44192896_44193029_44196004_44196156_44197160_44197386_44199218_44199704_44202381_44202566_44205033_44205137_44205981_44206070_44207148
ENSMUSG00000043067.16_0	chr9	-	4715	23	FSM	ENSMUSG00000043067.16	ENSMUST00000115277.9	4747	23	5	27	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	24399205	24323098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24388944_24389124_24393224_24393363_24396309_24396398_24397000_24397026_24399082
ENSMUSG00000043067.16_18	chr9	-	896	9	FSM	ENSMUSG00000043067.16	ENST00000426647.2	909	9	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCTCAGACAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	24345730	24325581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_24325720_24332376_24332497_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634
ENSMUSG00000043067.16_2	chr9	-	3445	23	FSM	ENSMUSG00000043067.16	ENSMUST00000142064.8	3489	23	19	25	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAAAAAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	24414417	24323098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_24324283_24325533_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ENSMUSG00000043067.16_8	chr9	-	4702	22	FSM	ENSMUSG00000043067.16	ENSMUST00000170356.2	4715	22	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATGTTAAATAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24414428	24323103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_24325720_24332376_24332503_24333555_24333656_24334308_24334484_24336021_24336142_24337429_24337455_24341726_24341777_24343655_24343728_24345634_24345737_24349924_24350006_24350424_24350485_24352050_24352138_24359082_24359161_24361951_24362052_24365101_24365194_24373872_24373931_24385069_24385164_24386628_24386750_24393224_24393363_24396309_24396398_24397000_24397026_24414134
ENSMUSG00000043068.7_0	chr8	-	1324	2	FSM	ENSMUSG00000043068.7	ENSMUST00000055257.7	1338	2	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTGTGGTTAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	125478558	125466996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125468041_125478278
ENSMUSG00000043079.18_0	chr18	-	5047	3	FSM	ENSMUSG00000043079.18	ENSMUST00000097566.10	5060	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTTGCCTTTCAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60757395	60727044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60729561_60735184_60737563_60757242
ENSMUSG00000043079.18_1	chr18	-	4968	3	FSM	ENSMUSG00000043079.18	ENSMUST00000130044.2	4970	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTTCGTCTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60757643	60727053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60729561_60735184_60737563_60757560
ENSMUSG00000043079.18_2	chr18	-	4885	2	ISM	ENSMUSG00000043079.18	ENSMUST00000097566.10	5060	3	19846	9	5615	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTTCGTCTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	60737562	60727053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_60729561_60735184
ENSMUSG00000043079.18_3	chr18	-	5125	3	FSM	ENSMUSG00000043079.18	ENSMUST00000130360.2	5159	3	33	1	33	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTTGTGCCTCCTGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	60762892	60727062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60729561_60735304_60737563_60762523
ENSMUSG00000043088.17_0	chr6	+	1457	11	FSM	ENSMUSG00000043088.17	ENST00000454190.6	1467	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGGTGCTTGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	113439796	113446992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113439929_113440913_113440983_113441721_113441789_113442675_113442852_113442940_113442989_113443069_113443116_113443213_113443369_113445397_113445467_113445797_113445919_113445990_113446090_113446517
ENSMUSG00000043091.10_0	chr15	+	1964	4	FSM	ENSMUSG00000043091.10	ENSMUST00000058914.10	1982	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1715	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGCAAACTGGCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	98927782	98935984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98928306_98931974_98932198_98932329_98932479_98934915
ENSMUSG00000043099.5_0	chr11	-	2998	2	FSM	ENSMUSG00000043099.5	ENST00000322941.3	3008	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACCAAGGTCCCTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	75058756	75055409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75058371_75058719
ENSMUSG00000043099.5_1	chr11	-	2955	1	ISM	ENSMUSG00000043099.5	ENSMUST00000055619.5	3497	2	1983	17	394	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGGTCCCTATAATCC	NA	NA	NA	NA	NA	NA	NA	NA	75058362	75055407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_75055400_75058400
ENSMUSG00000043102.3_0	chr2	-	2897	2	FSM	ENSMUSG00000043102.3	ENSMUST00000057407.3	2927	2	14	16	14	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAAAGAAAACCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	31700578	31696193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_31698931_31700418
ENSMUSG00000043131.15_0	chr6	+	4402	6	FSM	ENSMUSG00000043131.15	ENSMUST00000055261.11	4412	6	9	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTTATTATCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	83303006	83320757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83303250_83306848_83307016_83309435_83309530_83311057_83311192_83315262_83315427_83317157
ENSMUSG00000043131.15_2	chr6	+	4103	4	FSM	ENSMUSG00000043131.15	ENSMUST00000038658.15	4119	4	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCATTTATTATCTACGT	NA	NA	NA	NA	NA	NA	NA	NA	83303077	83320757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83303250_83306848_83307016_83315262_83315427_83317157
ENSMUSG00000043140.11_0	chr16	-	3379	2	FSM	ENSMUSG00000043140.11	ENSMUST00000052505.10	3391	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAATTCCAGGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	8455571	8451099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_8454257_8455349
ENSMUSG00000043153.7_0	chr12	+	2667	10	FSM	ENSMUSG00000043153.7	ENSMUST00000062041.6	2690	10	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGAAATGTCTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	36431534	36739437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698_36526745_36551976_36552072_36571431_36571522_36571957_36572051_36597827_36597960_36738247
ENSMUSG00000043153.7_1	chr12	+	3085	5	FSM	ENSMUSG00000043153.7	ENSMUST00000220519.2	3122	5	29	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGGAGAAAGAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	36431581	36528809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_36432024_36440344_36440622_36476287_36476438_36523100_36523206_36526698
ENSMUSG00000043154.16_0	chr9	-	6785	14	FSM	ENSMUSG00000043154.16	ENSMUST00000075941.12	6786	14	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGCGGTTTAGATACAATT	NA	NA	NA	NA	NA	NA	NA	NA	101128994	100982283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101088329_101090762_101128860
ENSMUSG00000043154.16_2	chr9	-	4423	13	FSM	ENSMUSG00000043154.16	ENSMUST00000066773.9	4461	13	37	1	37	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATCATATCTGTTACTG	NA	NA	NA	NA	NA	NA	NA	NA	101076235	100982485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_100985169_101002221_101002329_101003507_101003627_101004095_101004272_101021509_101021600_101022673_101022723_101025780_101025938_101030986_101031074_101052526_101052602_101057533_101057637_101063131_101063236_101071357_101071625_101075829
ENSMUSG00000043155.5_0	chr4	-	1793	1	FSM	ENSMUSG00000043155.5	ENSMUST00000055436.5	1804	1	4	7	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCACACTCCTGAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	116678900	116677107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116677100_116678900
ENSMUSG00000043162.8_0	chr6	-	3555	2	FSM	ENSMUSG00000043162.8	ENSMUST00000053386.6	3573	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTATATTTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	57669052	57663567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_57666864_57668793
ENSMUSG00000043165.8_0	chr3	-	1690	1	ISM	ENSMUSG00000043165.8	ENSMUST00000058150.8	1779	2	1175	7	1175	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAATCTCTGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	91989274	91987584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_91987600_91989300
ENSMUSG00000043165.8_1	chr3	-	1772	2	FSM	ENSMUSG00000043165.8	ENSMUST00000058150.8	1779	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAATCTCTGAGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	91990449	91987584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_91989308_91990400
ENSMUSG00000043183.19_0	chr13	+	4789	10	FSM	ENSMUSG00000043183.19	ENSMUST00000121401.8	4819	10	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAATCTTAGACTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	54651614	54699096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_54651818_54671782_54674486_54676116_54676350_54676966_54677037_54684894_54685050_54687516_54687670_54689236_54689366_54694789_54694947_54695067_54695153_54698195
ENSMUSG00000043190.15_0	chr13	-	2781	4	FSM	ENSMUSG00000043190.15	ENSMUST00000050997.2	2807	4	22	4	22	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAACATTGTGTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76166659	76149657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76165639
ENSMUSG00000043190.15_1	chr13	-	1420	4	FSM	ENSMUSG00000043190.15	ENSMUST00000179078.9	1436	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTACACATAAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	76166779	76150644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76151208_76156101_76156137_76156229_76156406_76166133
ENSMUSG00000043190.15_5	chr13	-	412	2	FSM	ENSMUSG00000043190.15	ENST00000513950.2	433	2	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAATGTACAGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	76156378	76150944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_76151208_76156229
ENSMUSG00000043207.11_0	chr4	-	3408	10	FSM	ENSMUSG00000043207.11	ENSMUST00000058754.9	3429	10	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTACGTCCTGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120955424	120916440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120918418_120923010_120923155_120925906_120926012_120931669_120931855_120938368_120938511_120940017_120940171_120940505_120940623_120944505_120944593_120952748_120952896_120955073
ENSMUSG00000043241.15_0	chr2	+	5166	22	FSM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGCATGATTTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	5956281	6061508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_5956365_5962281_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ENSMUSG00000043241.15_4	chr2	+	5091	21	ISM	ENSMUSG00000043241.15	ENSMUST00000060092.13	5174	22	6000	0	6000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTGTTTTATTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	5962279	6061514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_5962662_5965743_5966524_5978279_5978441_5980718_5980914_5984584_5984735_5987802_5987907_5993197_5993284_6008355_6008465_6015125_6015240_6023712_6023830_6028093_6028280_6030925_6031130_6032023_6032300_6034172_6034357_6038922_6039063_6044919_6045022_6045273_6045373_6051708_6051877_6055148_6055291_6056319_6056441_6060243
ENSMUSG00000043243.16_0	chr8	+	632	5	FSM	ENSMUSG00000043243.16	ENST00000335393.8	649	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACAGAGGTGAGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	72056317	72058352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72056472_72056564_72056724_72057381_72057499_72057571_72057672_72058250
ENSMUSG00000043251.7_0	chr8	-	2479	14	FSM	ENSMUSG00000043251.7	ENSMUST00000057855.4	2497	14	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACACGTCTGAATCTATG	NA	NA	NA	NA	NA	NA	NA	NA	106022717	106016560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106016783_106016863_106016989_106017080_106017237_106017313_106017437_106017554_106017685_106018966_106019078_106019280_106019382_106019483_106019610_106019693_106019812_106019883_106020494_106021596_106021817_106021891_106022068_106022257_106022339_106022537
ENSMUSG00000043252.9_0	chr4	+	4653	3	FSM	ENSMUSG00000043252.9	ENSMUST00000062684.9	4670	3	11	6	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTCTTCTCTCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	15265841	15286747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_15266750_15281006_15281163_15283158
ENSMUSG00000043252.9_1	chr4	+	4368	2	FSM	ENSMUSG00000043252.9	ENST00000418210.2	4388	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTATGTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	15265961	15286738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_15266750_15283158
ENSMUSG00000043257.16_0	chr4	-	3972	4	FSM	ENSMUSG00000043257.16	ENSMUST00000062118.11	3979	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	133399951	133387697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133390103_133391968_133393091_133397048_133397172_133399629
ENSMUSG00000043257.16_5	chr4	-	1739	4	FSM	ENSMUSG00000043257.16	ENST00000374145.6	1756	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAGTGTCAAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	133399710	133389821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133390103_133391968_133393091_133397048_133397162_133399487
ENSMUSG00000043257.16_6	chr4	-	1679	4	FSM	ENSMUSG00000043257.16	ENST00000455364.2	1696	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGGAGTGTCAAGGAATG	NA	NA	NA	NA	NA	NA	NA	NA	133400788	133389821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_133390103_133391968_133393091_133397048_133397165_133400628
ENSMUSG00000043259.16_0	chr10	+	3367	15	FSM	ENSMUSG00000043259.16	ENSMUST00000105436.9	3380	15	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATTTATTATGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	70276507	70394556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_70276729_70276866_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_12	chr10	+	3301	15	FSM	ENSMUSG00000043259.16	ENST00000618427.4	3321	15	14	6	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATTATGTTGAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	70276723	70394559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_70276910_70278235_70278307_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356670_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_15	chr10	+	3291	14	FSM	ENSMUSG00000043259.16	ENSMUST00000173042.9	3310	14	9	10	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATATTTATTATGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	70276718	70394556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356607_70356756_70370513_70370725_70372195_70372335_70378473_70378556_70380157_70380361_70387524_70387621_70388861_70389056_70390317_70390420_70393069
ENSMUSG00000043259.16_9	chr10	+	2898	12	FSM	ENSMUSG00000043259.16	ENST00000611933.4	2916	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATTGTAAATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	70276719	70394509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_70276906_70284587_70284645_70286856_70287059_70312983_70313103_70334715_70334780_70356670_70356756_70370513_70370725_70372195_70372335_70387524_70387621_70388858_70389056_70390317_70390420_70393069
ENSMUSG00000043262.17_0	chr7	-	4596	12	FSM	ENSMUSG00000043262.17	ENSMUST00000094398.13	4616	12	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGACTATCTGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	46608262	46572970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46576237_46577168_46577293_46580736_46580801_46587638_46587813_46589880_46590052_46593535_46593639_46594978_46595098_46597660_46597797_46600575_46600740_46604771_46604838_46605365_46605451_46608138
ENSMUSG00000043279.10_1	chr5	-	9269	3	FSM	ENSMUSG00000043279.10	ENSMUST00000054384.6	9279	3	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAATTACTCTTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	137145057	137134503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137143516_137143642_137143808_137144965
ENSMUSG00000043284.13_0	chr11	-	1490	3	FSM	ENSMUSG00000043284.13	ENSMUST00000168218.8	1511	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAACTTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60769853	60755287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60756175_60766585_60766874_60769538
ENSMUSG00000043284.13_1	chr11	-	1434	2	FSM	ENSMUSG00000043284.13	ENSMUST00000062677.12	1457	2	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATTTCAACTTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60770085	60755287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_60756175_60769538
ENSMUSG00000043286.13_0	chr17	+	586	5	ISM	ENSMUSG00000043286.13	ENST00000636260.2	706	6	8	5993	8	-5993	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTTCCCGAGGGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29095801	29099941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_29096019_29096360_29096427_29097339_29097550_29098409_29098471_29099909
ENSMUSG00000043286.13_7	chr17	+	546	4	ISM	ENSMUSG00000043286.13	ENST00000636260.2	706	6	16	7464	16	-7464	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACCTGGAGCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	29095809	29098470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_29096019_29096360_29096427_29097339_29097550_29098409
ENSMUSG00000043290.7_0	chr7	-	2131	2	FSM	ENSMUSG00000043290.7	ENSMUST00000062428.5	2153	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACAACGGAGTGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	5041430	5037444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_5039479_5041333
ENSMUSG00000043298.9_0	chr6	-	2020	2	FSM	ENSMUSG00000043298.9	ENSMUST00000068293.4	2056	2	24	12	24	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCACAATTTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	136812424	136806936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_136808887_136812354
ENSMUSG00000043300.3_0	chr3	-	1101	2	ISM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	72873	0	23008	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCACAGAAGGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69483285	69481404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_69482379_69483158
ENSMUSG00000043300.3_1	chr3	-	1139	3	FSM	ENSMUSG00000043300.3	ENST00000417187.2	1139	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCACAGAAGGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69556158	69481404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_69482379_69483158_69483294_69556128
ENSMUSG00000043300.3_3	chr3	-	2007	3	FSM	ENSMUSG00000043300.3	ENSMUST00000061826.3	2028	3	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTAGTCAGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	69506281	69481499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_69483294_69486658_69486725_69506134
ENSMUSG00000043311.8_0	chr17	+	2337	2	FSM	ENSMUSG00000043311.8	ENST00000375911.2	2347	2	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTGACAGCCGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	35345332	35347856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35347162_35347348
ENSMUSG00000043311.8_10	chr17	+	2067	2	ISM	ENSMUSG00000043311.8	ENSMUST00000061859.7	2142	3	260	7	260	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAGAGGTTCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	35345621	35347824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_35345762_35345897
ENSMUSG00000043311.8_8	chr17	+	2134	3	FSM	ENSMUSG00000043311.8	ENSMUST00000061859.7	2142	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGAGAGGTTCCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	35345362	35347824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35345427_35345618_35345762_35345897
ENSMUSG00000043313.7_0	chr18	+	7110	1	FSM	ENSMUSG00000043313.7	ENSMUST00000059571.7	7138	1	22	6	22	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGACATTTGCTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	37630065	37637175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37630100_37637200
ENSMUSG00000043323.18_0	chr5	-	4712	19	FSM	ENSMUSG00000043323.18	ENSMUST00000069483.12	4720	19	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAATGTGGTCCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	110596364	110509622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110511746_110518815_110519021_110519151_110519236_110519411_110519490_110522255_110522386_110523872_110523945_110524118_110524149_110524267_110524337_110525222_110525274_110525903_110526122_110526294_110526364_110526759_110526981_110527134_110527460_110529466_110529513_110543910_110543941_110563895_110563932_110565708_110565814_110580766_110580968_110595745
ENSMUSG00000043323.18_2	chr5	-	2668	2	FSM	ENSMUSG00000043323.18	ENSMUST00000198415.3	2692	2	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTACTAGTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	110581172	110577749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110580012_110580766
ENSMUSG00000043331.7_0	chr9	-	2813	2	FSM	ENSMUSG00000043331.7	ENSMUST00000216647.2	2848	2	22	13	22	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATCTCAGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	39863320	39859439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_39862085_39863152
ENSMUSG00000043333.13_0	chr4	+	1217	8	FSM	ENSMUSG00000043333.13	ENSMUST00000053202.12	1217	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123681667	123723697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123681765_123703706_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ENSMUSG00000043333.13_2	chr4	+	1122	7	FSM	ENSMUSG00000043333.13	ENSMUST00000106204.2	1120	7	-2	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123703704	123723697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_123703970_123708035_123708185_123711656_123711770_123716549_123716651_123718653_123718715_123720630_123720693_123723326
ENSMUSG00000043336.15_0	chr16	+	4436	5	FSM	ENSMUSG00000043336.15	ENSMUST00000159816.8	4452	5	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAATGAGCACACAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	57173460	57393478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_57173822_57326961_57327218_57327911_57328086_57333628_57333808_57390012
ENSMUSG00000043336.15_3	chr16	+	3245	2	FSM	ENSMUSG00000043336.15	ENSMUST00000159414.2	3253	2	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGCTGAATTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	57369607	57393162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_57369703_57390012
ENSMUSG00000043346.10_0	chr17	+	1337	1	FSM	ENSMUSG00000043346.10	ENSMUST00000057074.10	747	1	-31	-559	-31	559	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91544207	91545544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_91544200_91545500
ENSMUSG00000043372.13_0	chr11	+	1214	3	FSM	ENSMUSG00000043372.13	ENSMUST00000107037.8	1221	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCAGTGAGAGTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	103024139	103030010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_103024249_103024860_103024968_103029012
ENSMUSG00000043372.13_1	chr11	+	1897	3	FSM	ENSMUSG00000043372.13	ENSMUST00000062530.5	1910	3	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAAAAAATAAAAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	103024175	103030694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_103024284_103024860_103024968_103029012
ENSMUSG00000043384.16_1	chrX	+	5602	10	FSM	ENSMUSG00000043384.16	ENSMUST00000113147.8	5611	10	1	8	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAAATTGCCCCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	134643482	134704215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134649404_134649532_134652693_134652767_134698301_134698379_134698536_134698614_134698771_134698844_134699139_134699223_134699496
ENSMUSG00000043384.16_9	chrX	+	5270	5	FSM	ENSMUSG00000043384.16	ENST00000361600.9	5290	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTAAATCTCAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	134696863	134704320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134697047_134697678_134697787_134698771_134698844_134699139_134699223_134699496
ENSMUSG00000043391.11_0	chr16	-	5129	2	FSM	ENSMUSG00000043391.11	ENSMUST00000053336.8	5164	2	28	7	-8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGAACAAGACTGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	21513387	21467801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21472509_21512965
ENSMUSG00000043391.11_1	chr16	-	1108	2	FSM	ENSMUSG00000043391.11	ENSMUST00000231592.2	1135	2	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCAAATTCAGGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	21513361	21495480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21496193_21512965
ENSMUSG00000043411.16_0	chr4	+	5726	27	FSM	ENSMUSG00000043411.16	ENSMUST00000105840.8	5741	27	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTTTATCCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	137321460	137385837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343023_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352467_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUSG00000043411.16_8	chr4	+	5703	28	FSM	ENSMUSG00000043411.16	ENSMUST00000055131.13	5722	28	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGACCTTTATCCGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	137321531	137385837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137321828_137331833_137331955_137333062_137333220_137333999_137334128_137335368_137335494_137336308_137336418_137338000_137338135_137339016_137339100_137340992_137341173_137343026_137343153_137343668_137343819_137348372_137348571_137350584_137350700_137352470_137352599_137355484_137355557_137360424_137360550_137360653_137360777_137361143_137361206_137362208_137362320_137364244_137364299_137365070_137365202_137365466_137365574_137366516_137366622_137371653_137371810_137377603_137377730_137380268_137380318_137382533_137382561_137383432
ENSMUSG00000043415.6_0	chr2	+	2811	1	FSM	ENSMUSG00000043415.6	ENSMUST00000052168.6	2832	1	19	2	19	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTTTCTGGGTAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	19662581	19665392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_19662600_19665400
ENSMUSG00000043419.12_0	chr11	+	2058	2	FSM	ENSMUSG00000043419.12	ENSMUST00000129321.2	2081	2	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATCTGTGAAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	69231303	69233461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69231885_69231984
ENSMUSG00000043421.9_0	chr6	+	963	2	FSM	ENSMUSG00000043421.9	ENSMUST00000054445.9	982	2	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTGTCCTGTTGACAT	NA	NA	NA	NA	NA	NA	NA	NA	29272642	29275444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29272810_29274648
ENSMUSG00000043424.11_0	chr18	-	2361	1	FSM	ENSMUSG00000043424.11	ENSMUST00000057110.11	2379	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGAACCTGCAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	43610852	43608491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_43608500_43610900
ENSMUSG00000043424.11_1	chr18	-	886	2	Genic_Genomic	ENSMUSG00000043424.11	novel	2379	1	NA	NA	82	-1249	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGGAAACAAAGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	43610779	43609731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr18_-_43610226_43610387
ENSMUSG00000043432.8_0	chr7	-	2442	1	FSM	ENSMUSG00000043432.8	ENSMUST00000058358.8	2460	1	7	11	7	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGAAGGAAACATGAC	NA	NA	NA	NA	NA	NA	NA	NA	4153366	4150924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4150900_4153400
ENSMUSG00000043439.6_0	chr11	-	2299	1	FSM	ENSMUSG00000043439.6	ENSMUST00000052281.6	2314	1	2	13	2	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGACCAAACAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	97520526	97518227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97518200_97520500
ENSMUSG00000043441.6_0	chr3	-	4217	4	FSM	ENSMUSG00000043441.6	ENSMUST00000058535.6	4222	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCAATGAATATTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	62512561	62436502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_62438530_62502228_62502678_62509936_62510130_62511013
ENSMUSG00000043445.8_0	chr17	+	2611	2	FSM	ENSMUSG00000043445.8	ENSMUST00000053024.8	2627	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2048	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATTAGGTCTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	24689374	24692077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24690124_24690215
ENSMUSG00000043456.18_1	chr7	-	4794	4	FSM	ENSMUSG00000043456.18	ENST00000355537.4	4810	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTAGTGCAGTTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	37269410	37171565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37172466_37178705_37180275_37193110_37193264_37267238
ENSMUSG00000043458.6_0	chr18	+	3015	1	FSM	ENSMUSG00000043458.6	ENSMUST00000055495.6	3034	1	14	5	14	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTATTTTCTATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	37568687	37571702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37568700_37571700
ENSMUSG00000043463.7_0	chrX	-	183	2	FSM	ENSMUSG00000043463.7	ENST00000674274.1	204	2	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAGAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135769300	135767614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135767639_135769141
ENSMUSG00000043463.7_1	chrX	-	171	1	ISM	ENSMUSG00000043463.7	ENSMUST00000058814.7	3980	3	192	10246	3	-1533	mono-exon	FALSE	NA	NA	NA	NA	NA	245	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGTCTGCGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135769312	135769141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_135769100_135769300
ENSMUSG00000043467.20_0	chr1	-	3865	4	FSM	ENSMUSG00000043467.20	ENSMUST00000172044.8	3883	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCCAACCAAAAATATAAG	NA	NA	NA	NA	NA	NA	NA	NA	160861820	160845334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160847977_160857211_160857312_160859374_160860335_160861657
ENSMUSG00000043467.20_1	chr1	-	2469	5	FSM	ENSMUSG00000043467.20	ENSMUST00000159250.9	2473	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGAAGTAAAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	160862414	160846828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160847977_160857211_160857312_160859374_160860332_160861657_160861855_160862347
ENSMUSG00000043483.5_0	chr12	-	749	1	FSM	ENSMUSG00000043483.5	ENSMUST00000052882.5	636	1	11	-124	11	124	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATGGAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96889821	96889072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_96889100_96889800
ENSMUSG00000043501.6_2	chr15	-	354	3	FSM	ENSMUSG00000043501.6	ENST00000215886.6	372	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAGGTGAGGTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	78739798	78735471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78735624_78736477_78736553_78739671
ENSMUSG00000043510.13_0	chr5	-	792	6	FSM	ENSMUSG00000043510.13	ENSMUST00000056937.12	804	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTAATTGGAAATAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	110987631	110976935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110977078_110978801_110978850_110982520_110982666_110983845_110983936_110984172_110984270_110987361
ENSMUSG00000043531.17_0	chr19	-	2611	19	FSM	ENSMUSG00000043531.17	ENST00000369698.5	2643	19	7	25	7	-25	multi-exon	TRUE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAAACAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	50241109	50139435	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_50139790_50141197_50141359_50141491_50141598_50156956_50157057_50163487_50163620_50164496_50164610_50169839_50169964_50171090_50171225_50178458_50178646_50199086_50199259_50210560_50210675_50213536_50213668_50215179_50215298_50216637_50216746_50218648_50218741_50220708_50220786_50221052_50221156_50230385_50230533_50240971
ENSMUSG00000043535.14_0	chr2	+	10938	26	FSM	ENSMUSG00000043535.14	ENSMUST00000061578.9	10970	26	8	24	8	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAACAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	29015011	29072459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29015562_29015863_29015976_29016885_29017076_29020191_29020403_29023933_29024044_29029231_29029452_29030280_29030401_29033901_29034074_29034189_29034278_29034614_29038734_29040019_29040120_29043949_29044109_29046999_29047233_29048109_29048278_29048852_29049010_29051483_29051586_29051761_29051878_29052989_29053062_29054413_29054564_29056279_29056388_29061174_29061363_29062327_29062421_29063568_29063734_29066888_29066988_29067526_29067615_29069411
ENSMUSG00000043542.13_0	chr3	+	3274	9	FSM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAACACTAAGAATAACT	NA	NA	NA	NA	NA	NA	NA	NA	7568542	7618878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_7568588_7581515_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUSG00000043542.13_5	chr3	+	3221	8	ISM	ENSMUSG00000043542.13	ENSMUST00000051064.9	3292	9	12979	20	12976	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACACTAAGAATAA	NA	NA	NA	NA	NA	NA	NA	NA	7581521	7618876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_7581593_7583423_7583541_7589185_7589328_7591328_7591478_7593089_7593190_7593644_7593745_7604135_7604244_7616442
ENSMUSG00000043556.11_0	chr15	-	4624	4	NNC	ENSMUSG00000043556.11	novel	4632	4	NA	NA	8	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGACTCAGTTCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	26895658	26540546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_-_26543907_26552526_26553141_26789598_26789689_26895098
ENSMUSG00000043557.17_1	chr17	-	1831	9	FSM	ENSMUSG00000043557.17	ENST00000681439.1	1850	9	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1744	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATCGGTGAGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	30076696	30056975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_30057101_30057410_30057564_30058778_30058957_30059770_30059923_30061092_30061381_30061818_30062116_30065294_30065625_30071415_30071591_30076563
ENSMUSG00000043572.8_0	chr4	+	3046	2	FSM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106508294	106512477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106508329_106509465
ENSMUSG00000043572.8_1	chr4	+	2189	2	FSM	ENSMUSG00000043572.8	ENSMUST00000058905.8	2191	2	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106508302	106512477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106508329_106510314
ENSMUSG00000043572.8_2	chr4	+	2166	1	ISM	ENSMUSG00000043572.8	ENSMUST00000106781.2	3046	2	2017	0	2009	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGTGTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	106510311	106512477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_106510300_106512500
ENSMUSG00000043587.16_0	chr9	-	3043	6	ISM	ENSMUSG00000043587.16	ENSMUST00000112951.9	3118	7	28424	1	28424	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTTACGGTGTGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	96743042	96705389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96742843
ENSMUSG00000043587.16_1	chr9	-	3110	7	FSM	ENSMUSG00000043587.16	ENSMUST00000112951.9	3118	7	0	8	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTGTACAGCTTACGGTG	NA	NA	NA	NA	NA	NA	NA	NA	96771466	96705396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96742843_96743062_96771411
ENSMUSG00000043587.16_2	chr9	-	2898	6	FSM	ENSMUSG00000043587.16	ENSMUST00000078478.8	2908	6	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTAGCTTGTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	96771479	96705403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420_96738553_96771411
ENSMUSG00000043587.16_3	chr9	-	2831	5	ISM	ENSMUSG00000043587.16	ENSMUST00000112951.9	3118	7	32913	15	32913	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTAGCTTGTACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	96738553	96705403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_96707676_96710982_96711123_96721138_96721266_96722011_96722171_96738420
ENSMUSG00000043602.6_0	chr11	+	2049	2	FSM	ENSMUSG00000043602.6	ENSMUST00000060444.6	2061	2	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTCCTCTGGCCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	70655044	70663752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70655376_70662034
ENSMUSG00000043614.14_0	chr5	-	1537	4	FSM	ENSMUSG00000043614.14	ENSMUST00000067935.11	1544	4	0	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTGATGATGCCCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	135107120	135101760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135102838_135103247_135103331_135105311_135105484_135106915
ENSMUSG00000043631.9_0	chr13	+	3580	10	FSM	ENSMUSG00000043631.9	ENSMUST00000051504.8	3596	10	3	13	3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTAACTCAAAGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	49658288	49686252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49658482_49668269_49668576_49671777_49671967_49674047_49674549_49676251_49676368_49677798_49677935_49681085_49681244_49682349_49682490_49683540_49683868_49684738
ENSMUSG00000043639.16_0	chr19	+	4867	14	FSM	ENSMUSG00000043639.16	ENSMUST00000164202.9	4892	14	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCTGACCAGCATCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	53665755	53853805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_53666024_53801678_53802772_53803946_53804009_53805576_53805669_53806353_53806452_53821076_53821221_53823078_53823211_53829409_53829490_53831653_53832276_53838532_53838620_53839607_53840248_53841934_53842067_53847822_53847945_53852510
ENSMUSG00000043644.5_0	chr11	+	607	2	FSM	ENSMUSG00000043644.5	ENSMUST00000143813.2	619	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTGAGGAGCTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	120239508	120242009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120239689_120241582
ENSMUSG00000043659.12_0	chr9	+	1331	10	FSM	ENSMUSG00000043659.12	ENST00000360581.6	1335	10	4	0	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTACCAGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24009278	24225151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_24009363_24009406_24009643_24046029_24046163_24165895_24166000_24198052_24198147_24201095_24201298_24211694_24211772_24221304_24221392_24224468_24224650_24225018
ENSMUSG00000043659.12_10	chr9	+	1076	8	ISM	ENSMUSG00000043659.12	ENST00000531252.5	1112	9	79	1	79	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTATGTTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24009409	24224647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_24009643_24046029_24046163_24165928_24166000_24198052_24198147_24201095_24201298_24211694_24211772_24221304_24221392_24224468
ENSMUSG00000043659.12_11	chr9	+	1022	7	ISM	ENSMUSG00000043659.12	ENST00000381542.5	1081	8	95	8	95	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTGGATCTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	24009425	24225143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_24009643_24046029_24046163_24201095_24201298_24211694_24211772_24221304_24221392_24224468_24224650_24225018
ENSMUSG00000043659.12_4	chr9	+	1111	9	FSM	ENSMUSG00000043659.12	ENST00000531252.5	1112	9	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGTTATGTTCTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24009330	24224647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_24009363_24009406_24009643_24046029_24046163_24165928_24166000_24198052_24198147_24201095_24201298_24211694_24211772_24221304_24221392_24224468
ENSMUSG00000043659.12_9	chr9	+	1248	9	ISM	ENSMUSG00000043659.12	ENST00000360581.6	1335	10	131	0	75	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTTTACCAGTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	24009405	24225151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_24009643_24046029_24046163_24165895_24166000_24198052_24198147_24201095_24201298_24211694_24211772_24221304_24221392_24224468_24224650_24225018
ENSMUSG00000043664.8_0	chr8	-	1562	4	FSM	ENSMUSG00000043664.8	ENSMUST00000052072.8	1604	4	37	5	37	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTAGCTTTGTTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	72011478	72006886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_72007787_72008401_72008633_72010463_72010550_72011133
ENSMUSG00000043671.15_0	chr7	-	7993	19	FSM	ENSMUSG00000043671.15	ENSMUST00000051377.15	8006	19	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTAAGGGGGTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	35453873	35384596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35390368_35392201_35392361_35394706_35394840_35402913_35402997_35406805_35406863_35407484_35407597_35407959_35408083_35411285_35411445_35411569_35411644_35413550_35413653_35416011_35416144_35420969_35421105_35422131_35422256_35424715_35424862_35426714_35426837_35429110_35429202_35449164_35449299_35452039_35452182_35453679
ENSMUSG00000043683.5_0	chr17	+	6787	1	FSM	ENSMUSG00000043683.5	ENSMUST00000060253.5	6801	1	13	1	13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGTTTGTTTTAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	56563822	56570609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56563800_56570600
ENSMUSG00000043687.17_0	chr8	-	823	4	FSM	ENSMUSG00000043687.17	ENSMUST00000123927.9	844	4	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGCGGGTCCTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121361211	121335341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121361006
ENSMUSG00000043702.10_0	chr14	-	7717	3	FSM	ENSMUSG00000043702.10	ENSMUST00000052932.10	7725	3	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAATTTCTGTGTGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26391034	26381116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26387123_26387532_26387612_26389402
ENSMUSG00000043702.10_3	chr14	-	2256	3	FSM	ENSMUSG00000043702.10	ENST00000487257.1	2273	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGTGTACATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26390705	26386433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_26387250_26387474_26387612_26389402
ENSMUSG00000043716.14_0	chr1	-	1144	7	FSM	ENSMUSG00000043716.14	ENSMUST00000058437.14	1163	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAATGTGTCGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	16174876	16171527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16171584_16171950_16172161_16172713_16172824_16172915_16173054_16173391_16173559_16173733_16173909_16174588
ENSMUSG00000043733.15_0	chr5	-	5581	16	FSM	ENSMUSG00000043733.15	ENSMUST00000100770.9	5599	16	9	9	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGTATTTGTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	121329451	121268604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282748_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ENSMUSG00000043733.15_11	chr5	-	5534	16	FSM	ENSMUSG00000043733.15	ENSMUST00000054547.9	5535	16	0	1	0	-1	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACAGTATTTGTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	121329392	121268604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121272210_121272798_121272890_121275479_121275593_121281065_121281218_121281624_121281693_121282592_121282760_121287165_121287298_121290274_121290434_121290537_121290618_121292492_121292590_121300771_121300886_121301200_121301318_121302557_121302751_121305911_121306107_121310043_121310167_121329264
ENSMUSG00000043770.11_0	chr4	+	477	1	FSM	ENSMUSG00000043770.11	ENSMUST00000102482.5	297	1	-119	-61	-119	61	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTTTGTAATTCAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43663923	43664400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43663900_43664400
ENSMUSG00000043801.8_0	chr17	-	1013	1	FSM	ENSMUSG00000043801.8	ENSMUST00000052440.8	685	1	-60	-268	-60	268	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGATCTCGTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	17566462	17565449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_17565400_17566500
ENSMUSG00000043822.19_0	chr10	-	1948	13	FSM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	0	9	0	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAAAGAACAAATCCCT	NA	NA	NA	NA	NA	NA	NA	NA	80184246	80176683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ENSMUSG00000043822.19_1	chr10	-	1883	12	ISM	ENSMUSG00000043822.19	ENSMUST00000095446.10	1957	13	791	13	791	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACGTGGAAAAAGAACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	80183455	80176687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80177291_80177422_80177495_80177576_80177776_80177892_80178057_80178140_80178228_80178742_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390
ENSMUSG00000043822.19_5	chr10	-	983	8	FSM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTTCCTGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	80184246	80178578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390_80183460_80184189
ENSMUSG00000043822.19_6	chr10	-	924	7	ISM	ENSMUSG00000043822.19	ENSMUST00000105352.2	989	8	789	6	789	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCCCTTTCCTGCCTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	80183457	80178578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_80178855_80179432_80179561_80180666_80180776_80180876_80180938_80181155_80181248_80181346_80181538_80183390
ENSMUSG00000043831.13_0	chr7	+	2898	3	FSM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66872355	66878204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66872378_66873356_66873640_66875611
ENSMUSG00000043831.13_1	chr7	+	3760	4	FSM	ENSMUSG00000043831.13	ENSMUST00000207823.2	3772	4	0	12	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66872357	66878204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66872378_66873356_66873640_66874123_66874150_66874773
ENSMUSG00000043831.13_2	chr7	+	2863	2	ISM	ENSMUSG00000043831.13	ENSMUST00000058771.13	2898	3	1014	0	993	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66873369	66878204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_66873640_66875611
ENSMUSG00000043831.13_3	chr7	+	3737	3	ISM	ENSMUSG00000043831.13	ENSMUST00000207823.2	3772	4	1002	12	983	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACATGATTCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	66873359	66878204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_66873640_66874123_66874150_66874773
ENSMUSG00000043850.16_0	chr3	-	3065	4	FSM	ENSMUSG00000043850.16	ENSMUST00000055636.13	3083	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAACAAGTGTTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58792624	58751457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_58753873_58772392_58772573_58780121_58780176_58792208
ENSMUSG00000043850.16_2	chr3	-	714	3	FSM	ENSMUSG00000043850.16	ENST00000328863.8	730	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAAAGCAAATATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	58792450	58753611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_58753873_58772361_58772573_58792208
ENSMUSG00000043866.12_9	chr7	-	4263	5	FSM	ENSMUSG00000043866.12	ENSMUST00000141116.2	4281	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTATTTTCATCCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	105393557	105388606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105392271_105392432_105392548_105392634_105392700_105393036_105393192_105393293
ENSMUSG00000043872.15_0	chr4	-	3832	8	FSM	ENSMUSG00000043872.15	ENSMUST00000106102.9	3852	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAGAAGCAAAAAATTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	126954933	126940894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585_126952825_126953302_126953453_126954788
ENSMUSG00000043872.15_2	chr4	-	2992	6	FSM	ENSMUSG00000043872.15	ENSMUST00000055013.10	3001	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAATCCTAATGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	126952773	126941388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126943700_126944356_126944395_126944536_126944666_126945067_126945219_126948000_126948176_126952585
ENSMUSG00000043885.15_0	chr9	+	1732	11	FSM	ENSMUSG00000043885.15	ENSMUST00000115588.8	1745	11	3	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGACAATGAAAAATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	15621036	15649865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648325_15649369
ENSMUSG00000043885.15_1	chr9	+	6536	11	FSM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAATGTGTGTTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	15621037	15654657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_15621134_15630928_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ENSMUSG00000043885.15_4	chr9	+	6441	10	ISM	ENSMUSG00000043885.15	ENSMUST00000061568.9	6539	11	9893	0	9893	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAATGTGTGTTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	15630927	15654657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_15631053_15631995_15632087_15633228_15633318_15634809_15634906_15635816_15635902_15638106_15638335_15639996_15640096_15645432_15645603_15648167_15648338_15649369
ENSMUSG00000043895.7_0	chr9	-	6381	2	FSM	ENSMUSG00000043895.7	ENSMUST00000054197.7	6394	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTTGTTTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20888064	20873656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20879867_20887893
ENSMUSG00000043897.14_0	chr3	-	1499	4	FSM	ENSMUSG00000043897.14	ENST00000449668.1	1510	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGAGCTGTGAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	64044911	64023860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_64024836_64026176_64026294_64042073_64042195_64044625
ENSMUSG00000043903.5_0	chr8	+	12773	2	FSM	ENSMUSG00000043903.5	ENSMUST00000187142.3	12777	2	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCCCGTGGCTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	122985358	122999385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122985425_122986678
ENSMUSG00000043903.5_1	chr8	+	12708	1	FSM	ENSMUSG00000043903.5	ENSMUST00000055537.3	3078	1	-9630	0	1319	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCCCGTGGCTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	122986677	122999385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122986700_122999400
ENSMUSG00000043909.17_0	chr2	-	9608	28	FSM	ENSMUSG00000043909.17	ENSMUST00000110648.8	9621	28	5	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGATGACCTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	121101883	121025326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033240_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004_121101190_121101752
ENSMUSG00000043909.17_5	chr2	-	6050	27	FSM	ENSMUSG00000043909.17	ENST00000450115.6	6065	27	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGGGATGTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	121101178	121028736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121029089_121029456_121029603_121030087_121030288_121030783_121030879_121033023_121033234_121034813_121035030_121035400_121035593_121038179_121038611_121038835_121038986_121039561_121039834_121041750_121041904_121046147_121046653_121051638_121051732_121054185_121054244_121058125_121058330_121059068_121059189_121066053_121067351_121074374_121074578_121077981_121078077_121078644_121078772_121082348_121082516_121084082_121084213_121087002_121087162_121089624_121089750_121100384_121100470_121100699_121100791_121101004
ENSMUSG00000043913.15_0	chr5	-	3478	14	FSM	ENSMUSG00000043913.15	ENSMUST00000050178.13	3522	14	17	27	-5	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGGCTCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116427027	116262726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116264237_116269082_116269273_116272086_116272219_116274388_116274512_116275090_116275154_116278837_116278910_116284180_116284266_116295542_116295763_116301541_116301633_116310500_116310609_116318862_116318971_116328118_116328290_116363327_116363411_116426505
ENSMUSG00000043913.15_12	chr5	-	2143	6	FSM	ENSMUSG00000043913.15	ENSMUST00000086483.4	2168	6	24	1	-23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATGTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	116426998	116307284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116308465_116310500_116310609_116318862_116318971_116328118_116328290_116363327_116363411_116426505
ENSMUSG00000043913.15_4	chr5	-	1902	13	FSM	ENSMUSG00000043913.15	ENST00000327554.3	1917	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAGGTAATGAGCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	116426966	116269088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116269273_116272086_116272219_116274388_116274512_116275090_116275154_116278837_116278910_116284180_116284266_116295538_116295763_116301541_116301633_116310500_116310609_116318862_116318971_116328118_116328290_116363327_116363408_116426505
ENSMUSG00000043923.9_0	chr9	-	1709	11	FSM	ENSMUSG00000043923.9	ENSMUST00000053286.9	1725	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTACAGCTGATTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	44329857	44321462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44321662_44321744_44321878_44321987_44322078_44323749_44323781_44324213_44324320_44324433_44324499_44324767_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUSG00000043923.9_2	chr9	-	2642	5	FSM	ENSMUSG00000043923.9	ENSMUST00000213813.2	2675	5	20	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATCTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44329316	44322669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44324831_44324903_44324971_44328407_44328507_44328929_44329094_44329165
ENSMUSG00000043940.16_0	chr5	-	14258	67	FSM	ENSMUSG00000043940.16	ENSMUST00000053177.14	14274	67	6	10	6	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACCACAAAATAATTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	102217781	101980831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_101984148_101991882_101992081_101992413_101992526_101992786_101993111_101994968_101995066_101996188_101996372_101997134_101997315_101999105_101999265_102000088_102000244_102000373_102000522_102003254_102003468_102003670_102003763_102006330_102006485_102008283_102008391_102009229_102009348_102011642_102011763_102011942_102011998_102014062_102014144_102015359_102015446_102015898_102016020_102017826_102017976_102020697_102020862_102023706_102023876_102030288_102030517_102030779_102030858_102031908_102032067_102032996_102033180_102034826_102034934_102035952_102036183_102037051_102037213_102038615_102038716_102042776_102043011_102044264_102044445_102046292_102046428_102047879_102048116_102049636_102049855_102050305_102050427_102053969_102054065_102055314_102055477_102055551_102055626_102058792_102058946_102059903_102060095_102061038_102061151_102063204_102063366_102065265_102065498_102067261_102067444_102070279_102070499_102070620_102070722_102071721_102071954_102074289_102074403_102077746_102077962_102078693_102078872_102083855_102083940_102085147_102085606_102089305_102089500_102090885_102090988_102091746_102092215_102096673_102096841_102099090_102099278_102100846_102101040_102105249_102105412_102108981_102109092_102116734_102116859_102129244_102129456_102157654_102157754_102189520_102189610_102217461
ENSMUSG00000043943.15_0	chr9	-	2760	19	FSM	ENSMUSG00000043943.15	ENSMUST00000166825.8	2799	19	32	7	32	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTCTGTTAGCATCA	NA	NA	NA	NA	NA	NA	NA	NA	18297300	18234322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_18234920_18237471_18237565_18238659_18238742_18241930_18242196_18246223_18246315_18250686_18250779_18258749_18258818_18260145_18260210_18262145_18262229_18262331_18262452_18262705_18262792_18274437_18274537_18275416_18275511_18287718_18287906_18289903_18290030_18291207_18291310_18292090_18292278_18296340_18296453_18297088
ENSMUSG00000043962.17_0	chr4	-	3063	11	FSM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAATCCATCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	126088184	126059073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126088109
ENSMUSG00000043962.17_2	chr4	-	2988	10	ISM	ENSMUSG00000043962.17	ENST00000469141.6	3074	11	7807	7	7807	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAATCCATCCCACGA	NA	NA	NA	NA	NA	NA	NA	NA	126080381	126059073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227
ENSMUSG00000043962.17_4	chr4	-	4361	11	FSM	ENSMUSG00000043962.17	ENSMUST00000080919.12	4378	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTAAACGGACTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	126096545	126057883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_126059411_126060723_126060868_126061262_126061459_126065486_126065675_126067236_126067322_126069128_126069241_126069976_126070150_126071654_126072351_126073704_126074608_126080227_126080382_126096362
ENSMUSG00000043964.15_0	chr7	+	1986	2	FSM	ENSMUSG00000043964.15	ENSMUST00000061587.13	1996	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGTTATTCCCAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	127368996	127374322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127369389_127372728
ENSMUSG00000043964.15_1	chr7	+	2121	3	FSM	ENSMUSG00000043964.15	ENSMUST00000121504.2	2141	3	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACAGTTATTCCCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	127369004	127374320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127369389_127369905_127370051_127372728
ENSMUSG00000043969.5_0	chr19	+	2640	2	FSM	ENSMUSG00000043969.5	ENST00000442245.5	2650	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAGTTGTCTTGGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	59446893	59453788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_59448057_59452311
ENSMUSG00000043987.19_0	chr9	-	5526	30	FSM	ENSMUSG00000043987.19	ENSMUST00000117194.8	5541	30	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGGCAGTCCTGTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	45739978	45678247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45679662_45679818_45679942_45680706_45680774_45681992_45682356_45682828_45682941_45683579_45683688_45685115_45685324_45685739_45685808_45686081_45686206_45686489_45686666_45686974_45687044_45687162_45687247_45688080_45688225_45689705_45689829_45690094_45690227_45690440_45690519_45690679_45690909_45690987_45691135_45697075_45697220_45698723_45698810_45702380_45702465_45704229_45704311_45705349_45705728_45712762_45712841_45713940_45714076_45714470_45714627_45721001_45721207_45729275_45729388_45734943_45735063_45739799
ENSMUSG00000043991.6_0	chr18	+	5944	2	FSM	ENSMUSG00000043991.6	ENSMUST00000051301.6	5957	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGTACTCACTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	36414155	36425581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36414603_36420084
ENSMUSG00000043998.11_0	chr12	+	2601	1	FSM	ENSMUSG00000043998.11	ENSMUST00000060579.10	2614	1	9	4	9	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	1565	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGAGCATCACATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	69230939	69233540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69230900_69233500
ENSMUSG00000043999.7_1	chr11	+	1858	2	FSM	ENSMUSG00000043999.7	ENSMUST00000109430.2	2926	2	56	1012	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGCCAGCGAGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	30835413	30842717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_30835543_30840988
ENSMUSG00000043999.7_3	chr11	+	1726	1	NIC	ENSMUSG00000043999.7	novel	2926	2	NA	NA	5573	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAACATGGCCAGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	30840986	30842712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_30841000_30842700
ENSMUSG00000044005.14_0	chr10	+	2034	15	FSM	ENSMUSG00000044005.14	ENST00000610413.4	2049	15	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACATGAATTATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	128030501	128045797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128030777_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044005.14_13	chr10	+	2088	16	FSM	ENSMUSG00000044005.14	ENST00000539272.5	2107	16	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACATGAATTATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	128035006	128045797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128035151_128035505_128035628_128036041_128036172_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044005.14_3	chr10	+	2256	17	FSM	ENSMUSG00000044005.14	ENST00000623608.3	2271	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACATGAATTATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	128030501	128045797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128030777_128035050_128035151_128035505_128035628_128036754_128036835_128037074_128037239_128037427_128037487_128039691_128039725_128039943_128040003_128040529_128040597_128040729_128040781_128040956_128041134_128042740_128042873_128043166_128043260_128043429_128043492_128044459_128044537_128044974_128045039_128045156
ENSMUSG00000044017.17_17	chr5	+	2432	21	ISM	ENSMUSG00000044017.17	ENST00000261654.10	2524	22	5478	7	5478	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGACCTCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129192116	129279622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_129192242_129199474_129199655_129205917_129206177_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044017.17_2	chr5	+	2512	22	FSM	ENSMUSG00000044017.17	ENST00000261654.10	2524	22	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGGTGACCTCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129186643	129279622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129186726_129192118_129192242_129199474_129199655_129205917_129206177_129209721_129209932_129213998_129214059_129216651_129216770_129217797_129217909_129219523_129219600_129221030_129221173_129239658_129239733_129248869_129248994_129255112_129255217_129256232_129256345_129256606_129256761_129265389_129265457_129266696_129266764_129275681_129275774_129277743_129277871_129278195_129278238_129278519_129278613_129279527
ENSMUSG00000044018.4_0	chr4	-	2098	2	FSM	ENSMUSG00000044018.4	ENSMUST00000057829.4	2114	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGTTATTAAGTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	49521085	49512603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_49514578_49520961
ENSMUSG00000044022.6_0	chr18	+	4660	1	FSM	ENSMUSG00000044022.6	ENSMUST00000061405.6	4705	1	33	12	33	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37646706	37651366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37646700_37651400
ENSMUSG00000044024.17_0	chr18	+	1762	6	FSM	ENSMUSG00000044024.17	ENST00000521367.5	1773	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCATACCCTTTATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	38088258	38092173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38088970_38089981_38090048_38090141_38090209_38090641_38090828_38091066_38091443_38091817
ENSMUSG00000044030.5_0	chr7	+	2720	1	FSM	ENSMUSG00000044030.5	ENSMUST00000053713.5	2734	1	11	3	11	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGATGGTACTGAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	18737979	18740699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18738000_18740700
ENSMUSG00000044033.17_0	chr2	-	8942	23	FSM	ENSMUSG00000044033.17	ENSMUST00000049544.14	8969	23	19	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTCATCCTGAGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	77000960	76840253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ENSMUSG00000044033.17_11	chr2	-	612	3	FSM	ENSMUSG00000044033.17	ENSMUST00000111833.3	631	3	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCATACTTGATTTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	77000906	76992329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76992641_76998854_76998978_77000728
ENSMUSG00000044033.17_9	chr2	-	6208	24	FSM	ENSMUSG00000044033.17	ENSMUST00000164114.9	6222	24	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGTCCTGTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	77000950	76840341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76842102_76844737_76845592_76850256_76850374_76853789_76853903_76857935_76858120_76859579_76859775_76860910_76861052_76869779_76869930_76871708_76871889_76872786_76872976_76875003_76875130_76875949_76876130_76879922_76880103_76884920_76885113_76888236_76888357_76889883_76890026_76905179_76905353_76919413_76919609_76938706_76938824_76954465_76954720_76958572_76958682_76962525_76962718_76998854_76998978_77000728
ENSMUSG00000044037.16_0	chr9	+	5049	27	FSM	ENSMUSG00000044037.16	ENSMUST00000130386.8	5056	27	0	7	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTGTGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110709273	110729591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110709298_110711781_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ENSMUSG00000044037.16_1	chr9	+	4997	26	ISM	ENSMUSG00000044037.16	ENSMUST00000155014.2	5150	27	2405	4	2405	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTATTTGTGTGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	110711809	110729591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_110711892_110713082_110713215_110713934_110714134_110714455_110714522_110714850_110715017_110715473_110715606_110716359_110716480_110717547_110717607_110717753_110717821_110718172_110718370_110718774_110718841_110719152_110719252_110719368_110719531_110719849_110719962_110720921_110721000_110721861_110721993_110723054_110723229_110723363_110723461_110723633_110723792_110724352_110724419_110724779_110724954_110725704_110725748_110726568_110726631_110726754_110726905_110727116_110727214_110727483
ENSMUSG00000044041.5_0	chr11	-	1642	8	FSM	ENSMUSG00000044041.5	ENSMUST00000007275.3	1654	8	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTTGTTTCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	100012383	100008155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100008493_100008808_100008832_100009558_100009780_100009869_100009996_100010106_100010269_100010447_100010605_100010798_100010882_100011850
ENSMUSG00000044042.20_0	chr2	+	11805	19	FSM	ENSMUSG00000044042.20	ENSMUST00000099576.9	11817	19	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCCATCTGGTGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	113158086	113547106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_113158177_113194180_113196175_113259981_113260158_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ENSMUSG00000044042.20_2	chr2	+	11724	18	ISM	ENSMUSG00000044042.20	ENSMUST00000099576.9	11817	19	36097	0	-7	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTGTGTGGTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	113194177	113547112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_113196175_113259981_113260158_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ENSMUSG00000044042.20_3	chr2	+	4210	17	FSM	ENSMUSG00000044042.20	ENSMUST00000081349.9	4235	17	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTACAGTTTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	113271426	113540193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_113273005_113274686_113274805_113309246_113309309_113355495_113356287_113359657_113359809_113393627_113393716_113412442_113412505_113414375_113414465_113423431_113423562_113425367_113425515_113426677_113426738_113433513_113433635_113467076_113467170_113518453_113518506_113523353_113523504_113538207_113538293_113539760
ENSMUSG00000044043.5_0	chr18	+	8686	1	FSM	ENSMUSG00000044043.5	ENSMUST00000052387.5	8695	1	6	3	6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGCTTTTGTCAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	37580714	37589400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37580700_37589400
ENSMUSG00000044052.4_2	chr11	-	1572	1	ISM	ENSMUSG00000044052.4	ENST00000332438.4	1642	3	773	12587	773	-102	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGCTGGAGGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	101065496	101063924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101063900_101065500
ENSMUSG00000044052.4_3	chr11	-	1624	2	FSM	ENSMUSG00000044052.4	ENSMUST00000062759.4	1726	2	0	102	0	-102	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGGCTGGAGGCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	101066269	101063924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101065505_101066225
ENSMUSG00000044052.4_4	chr11	-	1899	2	FSM	ENSMUSG00000044052.4	ENST00000591765.1	1926	2	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAATTGATTCTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	101067302	101064317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101065505_101066590
ENSMUSG00000044056.4_0	chr11	-	589	3	FSM	ENSMUSG00000044056.4	ENSMUST00000109377.2	615	3	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGGTTTGGAGGAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	32482064	32473348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_32473703_32474391_32474541_32481978
ENSMUSG00000044056.4_1	chr11	-	509	2	ISM	ENSMUSG00000044056.4	ENSMUST00000054327.3	754	4	3037	594	3037	-5	internal_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTTGGAGGAGGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	32474542	32473344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_32473703_32474391
ENSMUSG00000044066.15_0	chr11	-	4790	7	FSM	ENSMUSG00000044066.15	ENSMUST00000050611.14	4804	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTATATTGGTGTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	20199409	20177041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20179482_20180423_20180595_20186005_20186103_20188465_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUSG00000044066.15_2	chr11	-	2144	4	FSM	ENSMUSG00000044066.15	ENSMUST00000109596.8	2171	4	20	7	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGTCTTGTAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	20199398	20188392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20188589_20189195_20190699_20191885_20192239_20199306
ENSMUSG00000044066.15_3	chr11	-	2780	3	FSM	ENSMUSG00000044066.15	ENSMUST00000162811.2	2788	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGTCTTGTAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	20199427	20188392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20190699_20191885_20192239_20199306
ENSMUSG00000044068.8_0	chr11	+	4481	1	FSM	ENSMUSG00000044068.8	ENSMUST00000049506.8	4492	1	10	1	10	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAACAGGTAATAGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	22922014	22926495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22922000_22926500
ENSMUSG00000044080.10_0	chr3	-	662	3	FSM	ENSMUSG00000044080.10	ENSMUST00000060738.9	677	3	8	7	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	778	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGCTATCAATGTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	90421691	90418347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90418672_90419302_90419457_90421507
ENSMUSG00000044086.9_0	chr6	-	2183	3	FSM	ENSMUSG00000044086.9	ENSMUST00000095655.4	2215	3	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAGTGTTAACTGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	97229697	97215503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_97215833_97224130_97225526_97229238
ENSMUSG00000044098.15_0	chr3	+	4751	8	FSM	ENSMUSG00000044098.15	ENSMUST00000051139.13	4762	8	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCCTTTACTGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	103821441	103873924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475_103869932_103871889
ENSMUSG00000044098.15_1	chr3	+	6694	7	FSM	ENSMUSG00000044098.15	ENSMUST00000068879.11	6712	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAATAGCACATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	103821478	103873946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103822470_103835666_103836341_103860952_103861091_103861420_103861564_103867318_103867487_103868788_103868898_103869475
ENSMUSG00000044134.10_0	chr5	+	2334	3	FSM	ENSMUSG00000044134.10	ENSMUST00000198271.5	2335	3	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATCCACAGTTGATATAT	NA	NA	NA	NA	NA	NA	NA	NA	121987047	121992695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121987188_121989230_121989343_121990613
ENSMUSG00000044134.10_1	chr5	+	2354	4	FSM	ENSMUSG00000044134.10	ENSMUST00000056654.8	2368	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGCTGGGTGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	121987071	121992662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121987188_121988532_121988610_121989230_121989343_121990613
ENSMUSG00000044147.9_0	chr12	+	1530	2	FSM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAAACTGCCGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69418925	69420555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69418998_69419097
ENSMUSG00000044147.9_1	chr12	+	1451	1	ISM	ENSMUSG00000044147.9	ENSMUST00000050063.9	1534	2	176	7	176	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAATCAAACTGCCGTT	NA	NA	NA	NA	NA	NA	NA	NA	69419099	69420550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_69419100_69420600
ENSMUSG00000044148.7_0	chrX	-	2678	7	FSM	ENSMUSG00000044148.7	ENSMUST00000060108.7	2699	7	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGAAAAATTCTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	12539897	12521128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_12522726_12524100_12524264_12528888_12529069_12530738_12530889_12535765_12535886_12539264_12539400_12539564
ENSMUSG00000044148.7_3	chrX	-	995	4	FSM	ENSMUSG00000044148.7	ENST00000378426.5	1013	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAGGTACAGGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	12539773	12528895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_12529069_12530738_12530889_12535765_12535929_12539264
ENSMUSG00000044150.13_0	chrX	+	3344	12	FSM	ENSMUSG00000044150.13	ENSMUST00000112464.8	3366	12	19	3	19	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGGTGAGAGCATTCT	NA	NA	NA	NA	NA	NA	NA	NA	158315682	158376074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158315832_158331234_158331312_158334746_158335371_158336239_158336891_158338470_158338647_158340438_158340554_158341330_158341395_158342833_158342950_158349423_158349539_158350914_158351011_158357940_158358094_158375066
ENSMUSG00000044155.12_0	chr6	+	800	4	FSM	ENSMUSG00000044155.12	ENSMUST00000056398.11	807	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTTTCTTTTCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	18848584	18854052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_18848763_18849624_18849666_18851634_18851763_18853599
ENSMUSG00000044167.7_0	chr3	+	8654	3	FSM	ENSMUSG00000044167.7	ENSMUST00000053764.7	8665	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAAAAAAAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	52175767	52260642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_52176844_52252459_52253812_52254416
ENSMUSG00000044197.9_0	chr5	+	4137	2	FSM	ENSMUSG00000044197.9	ENSMUST00000051293.8	4157	2	10	10	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTCATCACCCTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	139366345	139382160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139366499_139378176
ENSMUSG00000044197.9_1	chr5	+	1495	2	FSM	ENSMUSG00000044197.9	ENST00000444847.2	1514	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTTCATATTGACATGAT	NA	NA	NA	NA	NA	NA	NA	NA	139366402	139379571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139366503_139378176
ENSMUSG00000044197.9_2	chr5	+	4244	2	FSM	ENSMUSG00000044197.9	ENSMUST00000100514.3	4264	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCATCACCCTGTTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	139375552	139382162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139375811_139378176
ENSMUSG00000044201.11_0	chr18	-	1922	15	FSM	ENSMUSG00000044201.11	ENSMUST00000060710.9	1945	15	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAACCAAAACCTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	34884575	34866057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34866447_34866629_34866742_34867771_34867906_34868423_34868523_34871268_34871332_34873380_34873483_34876990_34877117_34877923_34878023_34880276_34880367_34880662_34880697_34881967_34882014_34882569_34882665_34883790_34884017_34884166_34884265_34884366
ENSMUSG00000044217.18_0	chr15	+	1781	4	FSM	ENSMUSG00000044217.18	ENSMUST00000169082.3	1797	4	10	6	10	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGCCTTCATCTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	99488672	99492704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99489516_99490542_99490708_99491126_99491211_99492015
ENSMUSG00000044217.18_1	chr15	+	1395	4	FSM	ENSMUSG00000044217.18	ENSMUST00000229728.2	1415	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTCATATTGTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	99489044	99492695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99489516_99490547_99490708_99491126_99491211_99492015
ENSMUSG00000044221.15_0	chr5	-	2516	10	FSM	ENSMUSG00000044221.15	ENSMUST00000078945.12	2538	10	10	12	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAATCAAAGTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	88824020	88807318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823616
ENSMUSG00000044221.15_7	chr5	-	2273	10	FSM	ENSMUSG00000044221.15	ENSMUST00000113234.8	2286	10	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAATCAAAGTTCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	88823514	88807318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_88808319_88810393_88810470_88810978_88811115_88811922_88812045_88813615_88813801_88818034_88818171_88819020_88819165_88820463_88820620_88821551_88821709_88823353
ENSMUSG00000044224.17_0	chr15	-	2043	12	FSM	ENSMUSG00000044224.17	ENSMUST00000136591.8	2060	12	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTTTCTGCTTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	10470591	10446847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_10447313_10447781_10447858_10449661_10449835_10451640_10451684_10452291_10452451_10454855_10454944_10460040_10460193_10461205_10461511_10461961_10462085_10462308_10462433_10463972_10464067_10470350
ENSMUSG00000044229.10_1	chr9	+	989	4	FSM	ENSMUSG00000044229.10	ENST00000424261.6	1004	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACTCTTTGAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	48304109	48310386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_48304278_48305438_48305501_48307786_48307994_48309834
ENSMUSG00000044231.4_0	chr13	-	2282	1	FSM	ENSMUSG00000044231.4	ENSMUST00000052747.4	2294	1	11	1	11	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCTGGAAACGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	47168315	47166033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_47166000_47168300
ENSMUSG00000044250.9_0	chr15	+	2151	6	FSM	ENSMUSG00000044250.9	ENSMUST00000059433.8	2185	6	16	18	16	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATTGAAATACAG	NA	NA	NA	NA	NA	NA	NA	NA	97145003	97283539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97145046_97175214_97175298_97177731_97177797_97259080_97259217_97271836_97272031_97281908
ENSMUSG00000044250.9_1	chr15	+	2116	5	ISM	ENSMUSG00000044250.9	ENSMUST00000059433.8	2185	6	30232	6	30232	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAGAAATTGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	97175219	97283551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_97175298_97177731_97177797_97259080_97259217_97271836_97272031_97281908
ENSMUSG00000044252.19_0	chr18	-	3944	28	FSM	ENSMUSG00000044252.19	ENSMUST00000074352.11	3956	28	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	13074886	12888370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_13004134_13004242_13015252_13015335_13025223_13025347_13031259_13031359_13038079_13038144_13038250_13038325_13039027_13039073_13039944_13040007_13042914_13043060_13044133_13044220_13047558_13047671_13061317_13061393_13062064_13062151_13066636_13066760_13074688
ENSMUSG00000044252.19_1	chr18	-	3026	14	FSM	ENSMUSG00000044252.19	ENSMUST00000121808.8	3030	14	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTCAGTTGATATTGT	NA	NA	NA	NA	NA	NA	NA	NA	12995726	12888370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12995163
ENSMUSG00000044252.19_7	chr18	-	2777	14	FSM	ENSMUSG00000044252.19	ENSMUST00000234871.2	2818	14	23	18	23	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATCAAATAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	12996474	12888402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12974240_12974404_12996128
ENSMUSG00000044252.19_8	chr18	-	2859	13	FSM	ENSMUSG00000044252.19	ENSMUST00000118313.8	2893	13	16	18	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATCAAATAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	12995754	12888402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12889365_12890664_12890756_12891823_12891948_12892455_12892573_12895622_12895750_12895965_12896056_12896538_12896647_12899859_12900043_12901594_12901693_12904355_12904491_12921376_12921453_12952561_12952719_12995163
ENSMUSG00000044254.7_0	chr4	-	3511	12	FSM	ENSMUSG00000044254.7	ENSMUST00000049507.6	3521	12	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGAGGCTGCCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	106321521	106299530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106300756_106301873_106302056_106303792_106303971_106304326_106304476_106304703_106304878_106306056_106306241_106307236_106307434_106311421_106311564_106311709_106311844_106314061_106314186_106316033_106316226_106320891
ENSMUSG00000044258.11_0	chr13	-	1362	5	FSM	ENSMUSG00000044258.11	ENSMUST00000021880.10	1373	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCTAAATTGTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	61084428	61081968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_61082843_61083143_61083267_61083360_61083484_61083771_61083890_61084304
ENSMUSG00000044285.9_3	chr14	+	668	2	FSM	ENSMUSG00000044285.9	ENSMUST00000227415.2	750	2	73	9	-27	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGGTGGACTCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	46321557	46322448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_46321774_46321996
ENSMUSG00000044285.9_9	chr14	+	228	1	FSM	ENSMUSG00000044285.9	ENSMUST00000111388.5	685	1	455	2	455	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTATTCGGTCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	46322039	46322267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_46322000_46322300
ENSMUSG00000044288.7_0	chr4	+	5778	2	FSM	ENSMUSG00000044288.7	ENSMUST00000057188.7	5807	2	16	13	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAACATAACAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	33924647	33948818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_33925159_33943551
ENSMUSG00000044308.18_1	chr2	+	8045	39	FSM	ENSMUSG00000044308.18	ENSMUST00000055758.16	8072	39	23	4	23	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAATGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	69727612	69854353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69728184_69744757_69744898_69747420_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821970_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ENSMUSG00000044308.18_3	chr2	+	8069	39	NIC	ENSMUSG00000044308.18	novel	8081	39	NA	NA	8	-4	combination_of_known_junctions	TRUE	non_canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGTTGAATGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	69727597	69854353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_69728184_69744757_69744898_69747423_69747580_69752588_69752733_69753227_69753278_69764732_69764800_69766235_69766367_69768427_69768657_69774643_69774824_69775357_69775492_69778767_69778855_69781686_69781753_69781843_69781934_69783084_69783214_69783831_69783885_69783986_69784121_69784619_69784706_69786308_69786451_69789910_69790008_69795717_69795860_69800480_69800586_69801403_69801578_69803492_69803954_69808062_69808152_69809662_69809813_69813471_69813606_69819129_69819241_69821768_69821982_69824019_69824157_69830801_69830888_69833697_69833804_69839446_69839551_69843433_69843559_69846475_69846584_69846683_69846810_69848736_69848917_69850794_69851005_69851455_69851596_69851886
ENSMUSG00000044328.14_0	chr11	-	1444	7	FSM	ENSMUSG00000044328.14	ENSMUST00000060417.11	1463	7	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	851	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCGGAGTCGTTGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	77404185	77398932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77399204_77399282_77399818_77399901_77400100_77400423_77400553_77403478_77403521_77403722_77403792_77403985
ENSMUSG00000044337.6_0	chr1	+	3051	2	FSM	ENSMUSG00000044337.6	ENSMUST00000065587.5	3065	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCCTGCTACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	90131707	90144465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_90131810_90141516
ENSMUSG00000044337.6_1	chr1	+	2951	1	NIC	ENSMUSG00000044337.6	novel	3065	2	NA	NA	9813	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCCTGCTACATCCT	NA	NA	NA	NA	NA	NA	NA	NA	90141514	90144465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_90141500_90144500
ENSMUSG00000044339.13_0	chr5	-	1038	4	FSM	ENSMUSG00000044339.13	ENSMUST00000053657.13	1073	4	29	6	29	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATTTGGGGGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	114266208	114261992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114265936
ENSMUSG00000044339.13_1	chr5	-	886	4	FSM	ENSMUSG00000044339.13	ENSMUST00000112279.2	899	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTATTGTATTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	114266270	114261999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114262316_114263592_114263792_114265586_114265831_114266143
ENSMUSG00000044340.8_0	chr1	+	6209	17	FSM	ENSMUSG00000044340.8	ENSMUST00000061047.7	6226	17	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGAATCTATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	106099488	106321970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_106101178_106209092_106209290_106214720_106214847_106246578_106246746_106266466_106266614_106267169_106267401_106271106_106271310_106272589_106272651_106274814_106274911_106278261_106278418_106291970_106292172_106296743_106296907_106303890_106304022_106308047_106308153_106314056_106314252_106317403_106317633_106319858
ENSMUSG00000044345.10_0	chr19	+	3049	2	FSM	ENSMUSG00000044345.10	ENSMUST00000061111.10	3066	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTGTTTGGGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	42135849	42140136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42137999_42139236
ENSMUSG00000044348.15_0	chrX	-	3166	7	FSM	ENSMUSG00000044348.15	ENSMUST00000113069.9	3189	7	13	10	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAATATTTAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	135939036	135881874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135884371_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099_135933250_135938972
ENSMUSG00000044348.15_1	chrX	-	3097	6	ISM	ENSMUSG00000044348.15	ENSMUST00000113069.9	3189	7	5805	10	5783	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCACAATATTTAGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	135933244	135881874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_135884371_135916005_135916132_135916997_135917089_135928738_135928904_135930774_135930849_135933099
ENSMUSG00000044350.15_0	chr14	-	2431	8	FSM	ENSMUSG00000044350.15	ENSMUST00000062789.15	2444	8	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCATTTTTGTTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	77274075	77261646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_77262415_77266967_77267129_77268176_77268403_77270625_77270792_77271444_77271624_77272232_77272846_77273251_77273431_77273936
ENSMUSG00000044350.15_2	chr14	-	611	3	FSM	ENSMUSG00000044350.15	ENST00000627615.1	629	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTACAGAACAGTCTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	77270749	77266969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_77267227_77268172_77268403_77270625
ENSMUSG00000044362.9_0	chr7	+	2070	1	FSM	ENSMUSG00000044362.9	ENSMUST00000061391.9	2093	1	14	9	14	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAATTTATTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	90075798	90077868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_90075800_90077900
ENSMUSG00000044367.8_0	chr11	-	2514	4	FSM	ENSMUSG00000044367.8	ENSMUST00000060010.3	2531	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTAGGTCTGATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	70111810	70107621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70108748_70109418_70110157_70111020_70111165_70111304
ENSMUSG00000044390.6_0	chr19	-	2124	2	FSM	ENSMUSG00000044390.6	ENSMUST00000236767.2	2155	2	23	8	-19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAAAGTCAGGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5944154	5941178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5943146_5943997
ENSMUSG00000044408.8_0	chr12	-	1324	2	FSM	ENSMUSG00000044408.8	ENSMUST00000056228.8	1346	2	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAATGTAGCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	54703349	54692189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54693321_54703156
ENSMUSG00000044424.5_0	chr19	+	561	1	FSM	ENSMUSG00000044424.5	ENSMUST00000104916.4	571	1	3	7	3	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTGTAAAGAAAATGACTG	NA	NA	NA	NA	NA	NA	NA	NA	23597115	23597676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_23597100_23597700
ENSMUSG00000044442.12_0	chr16	+	1863	6	FSM	ENSMUSG00000044442.12	ENSMUST00000054442.11	1884	6	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGAATAAAAGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87151080	87165617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87163026_87163169_87164352
ENSMUSG00000044442.12_1	chr16	+	1674	5	FSM	ENSMUSG00000044442.12	ENSMUST00000118310.8	1700	5	13	13	-3	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGAATAAAAGAACTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87151127	87165617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_87151275_87153065_87153153_87153785_87153877_87159407_87159492_87164352
ENSMUSG00000044447.6_0	chr14	-	9968	52	FSM	ENSMUSG00000044447.6	ENSMUST00000039135.6	9988	52	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTATTTTGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	68170868	67989590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67993972_67994556_67994658_67995385_67995525_67996479_67996649_68000608_68000776_68002042_68002181_68003305_68003390_68004701_68004879_68007680_68007768_68008456_68008542_68009137_68009220_68010500_68010643_68011941_68012047_68013694_68013785_68015021_68015142_68017727_68017819_68018448_68018490_68019442_68019603_68022248_68022335_68023721_68023877_68024273_68024333_68027668_68027770_68029669_68029749_68031384_68031480_68033418_68033518_68037791_68037888_68040431_68040569_68043178_68043286_68043871_68043943_68044710_68044823_68046453_68046589_68049590_68049692_68051376_68051467_68051724_68051823_68054961_68055146_68056135_68056240_68057089_68057163_68058767_68058867_68059994_68060120_68062048_68062175_68065809_68065953_68069666_68069740_68073762_68073893_68076995_68077078_68078458_68078617_68080213_68080350_68083437_68083587_68095351_68095449_68097347_68097404_68103480_68103522_68118647_68118732_68170740
ENSMUSG00000044452.11_0	chr7	-	6681	7	FSM	ENSMUSG00000044452.11	ENSMUST00000061586.11	6693	7	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCACTTGTTTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	35502411	35471776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_35475753_35475862_35475998_35487142_35487258_35491072_35491188_35492947_35495044_35500862_35500954_35502258
ENSMUSG00000044456.17_0	chr12	+	3861	10	FSM	ENSMUSG00000044456.17	ENSMUST00000056950.14	3892	10	21	10	21	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTAACTTCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102249327	102357104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
ENSMUSG00000044456.17_1	chr12	+	2356	6	FSM	ENSMUSG00000044456.17	ENSMUST00000101114.11	2394	6	35	3	34	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGATGAATTGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	102249460	102329324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102327584
ENSMUSG00000044456.17_2	chr12	+	927	4	FSM	ENSMUSG00000044456.17	ENSMUST00000150795.8	937	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGACCTCTTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	102249430	102293038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102249586_102279233_102279442_102292053_102292172_102292592
ENSMUSG00000044456.17_3	chr12	+	3735	10	FSM	ENSMUSG00000044456.17	ENSMUST00000133820.2	3755	10	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCTAACTTCCCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	102249909	102357104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102250042_102279233_102279442_102292053_102292172_102317140_102317214_102324963_102325056_102334622_102336108_102339828_102340138_102348811_102348944_102353812_102353977_102356082
ENSMUSG00000044465.20_0	chr7	-	10835	12	FSM	ENSMUSG00000044465.20	ENSMUST00000179474.9	10853	12	15	3	-7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGGTTGTTCACATCT	NA	NA	NA	NA	NA	NA	NA	NA	105049246	105020420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUSG00000044465.20_2	chr7	-	3433	12	FSM	ENSMUSG00000044465.20	ENSMUST00000048079.14	3443	12	2	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTATTCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105049207	105027825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUSG00000044465.20_4	chr7	-	2830	12	FSM	ENSMUSG00000044465.20	ENSMUST00000118726.8	2855	12	25	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTGCTCATTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105049190	105027817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105033581_105033780_105034152_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105049090
ENSMUSG00000044465.20_7	chr7	-	3514	13	FSM	ENSMUSG00000044465.20	ENSMUST00000122327.7	3521	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTCTATTCTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	105049239	105027825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_105028337_105030286_105030450_105030605_105030785_105032987_105033780_105034194_105034359_105034549_105034630_105037390_105037559_105037762_105037850_105037985_105038145_105038460_105039100_105039227_105039560_105040783_105040875_105049090
ENSMUSG00000044468.15_0	chr3	-	5613	2	FSM	ENSMUSG00000044468.15	ENSMUST00000061455.9	5640	2	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGTAAAAAACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	100396627	100375386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_100380782_100396409
ENSMUSG00000044469.9_0	chr17	+	2357	2	FSM	ENSMUSG00000044469.9	ENSMUST00000077788.7	2379	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCTACAGCCCTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	56469491	56480948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56469607_56478706
ENSMUSG00000044471.13_0	chr6	-	1525	3	FSM	ENSMUSG00000044471.13	ENST00000643452.1	1545	3	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCACCCAGGCAGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	31197390	31158016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_31158085_31195008_31196071_31196995
ENSMUSG00000044475.15_0	chr10	+	1443	11	FSM	ENSMUSG00000044475.15	ENSMUST00000050516.14	1450	11	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGCTGTGCTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	59838662	59935803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59838730_59840616_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUSG00000044475.15_13	chr10	+	572	4	ISM	ENSMUSG00000044475.15	ENST00000317168.11	685	5	1138	11	1138	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTAGAAATGGAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	59849416	59934044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_59849597_59877942_59878080_59898281_59898407_59933914
ENSMUSG00000044475.15_5	chr10	+	1375	10	ISM	ENSMUSG00000044475.15	ENSMUST00000164083.4	1473	11	1469	7	1469	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGCTGTGCTGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	59840617	59935803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_59840750_59843548_59843649_59848283_59848382_59849417_59849597_59877942_59878080_59885573_59885694_59898281_59898407_59900144_59900231_59933914_59934037_59935527
ENSMUSG00000044475.15_7	chr10	+	666	5	FSM	ENSMUSG00000044475.15	ENST00000317168.11	685	5	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTAGAAATGGAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	59848286	59934044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59848382_59849417_59849597_59877942_59878080_59898281_59898407_59933914
ENSMUSG00000044475.15_8	chr10	+	753	6	FSM	ENSMUSG00000044475.15	ENST00000672940.1	771	6	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTAGAAATGGAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	59848285	59934044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59848382_59849417_59849597_59877942_59878080_59898281_59898407_59900144_59900231_59933914
ENSMUSG00000044477.13_0	chr17	+	3017	6	FSM	ENSMUSG00000044477.13	ENSMUST00000226208.3	3039	6	13	9	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGACATTTGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30223719	30428987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30372276_30372343_30411536_30411705_30426991
ENSMUSG00000044477.13_1	chr17	+	2627	5	FSM	ENSMUSG00000044477.13	ENSMUST00000057897.10	2640	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGACATTTGGATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	30224043	30428987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_30224283_30279783_30279825_30354296_30354480_30411536_30411705_30426991
ENSMUSG00000044496.7_0	chr4	+	2721	3	FSM	ENSMUSG00000044496.7	ENSMUST00000103232.2	2731	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTCCATTACTGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	148025354	148031764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_148026515_148029064_148029919_148031057
ENSMUSG00000044501.18_0	chr17	+	2844	4	FSM	ENSMUSG00000044501.18	ENSMUST00000121315.2	2860	4	7	9	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACCATTCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	22580509	22596253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_22580689_22591016_22591070_22592623_22592751_22593768
ENSMUSG00000044502.17_0	chr11	-	1369	4	FSM	ENSMUSG00000044502.17	ENSMUST00000058060.14	1394	4	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGTTGTTTGACGA	NA	NA	NA	NA	NA	NA	NA	NA	31621868	31615188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_31615868_31616736_31616934_31619243_31619369_31621500
ENSMUSG00000044519.9_0	chr14	-	4228	1	ISM	ENSMUSG00000044519.9	ENSMUST00000166737.2	4301	2	7463	4	7463	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCCACTCAGTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	33693258	33689030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_33689000_33693300
ENSMUSG00000044519.9_1	chr14	-	4297	2	FSM	ENSMUSG00000044519.9	ENSMUST00000166737.2	4301	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGCCACTCAGTCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	33700721	33689030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_33693273_33700666
ENSMUSG00000044528.6_0	chr3	+	3876	1	FSM	ENSMUSG00000044528.6	ENSMUST00000058994.6	3889	1	8	5	8	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGGCATGAGCTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	124114511	124118387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_124114500_124118400
ENSMUSG00000044533.16_0	chr17	+	993	6	FSM	ENSMUSG00000044533.16	ENSMUST00000170715.8	998	6	2	3	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTATGTTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	24939038	24940897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24939107_24939246_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUSG00000044533.16_6	chr17	+	925	5	FSM	ENSMUSG00000044533.16	ENSMUST00000054289.13	1094	5	163	6	22	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTATGTTTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	24939246	24940897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24939427_24939507_24939706_24939942_24940277_24940596_24940689_24940776
ENSMUSG00000044548.12_0	chr12	+	2377	4	FSM	ENSMUSG00000044548.12	ENST00000541264.2	2399	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTTTCCTTTCACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	71357465	71365758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71357740_71359459_71359593_71360558_71360715_71363944
ENSMUSG00000044551.14_0	chr14	-	1966	7	FSM	ENSMUSG00000044551.14	ENSMUST00000058240.14	1986	7	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGCTGTGACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	70396938	70391860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70392726_70393298_70393406_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
ENSMUSG00000044551.14_1	chr14	-	1958	7	FSM	ENSMUSG00000044551.14	ENSMUST00000153871.2	1983	7	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGCTGTGACTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	70396933	70391860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70392726_70393298_70393403_70393609_70393726_70393864_70393968_70394107_70394249_70394627_70395104_70396780
ENSMUSG00000044566.16_0	chr13	-	2866	13	FSM	ENSMUSG00000044566.16	ENSMUST00000110233.8	2875	13	7	2	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATGTTAACTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	38220892	38190029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38190150_38191915_38191985_38195323_38195395_38196367_38196473_38199655_38199764_38200386_38200468_38201272_38201384_38203142_38203290_38206388_38207445_38209258_38209780_38212078_38212167_38216340_38216601_38220763
ENSMUSG00000044566.16_2	chr13	-	3432	4	FSM	ENSMUSG00000044566.16	ENSMUST00000089840.5	3449	4	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACAGACATGGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	38221038	38204896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_38207445_38209258_38209780_38212078_38212167_38220763
ENSMUSG00000044573.17_10	chr12	-	3052	6	FSM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGATGGTTCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30961565	30943333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067_30955142_30961488
ENSMUSG00000044573.17_11	chr12	-	2975	5	ISM	ENSMUSG00000044573.17	ENSMUST00000062740.15	3066	6	6429	9	1	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAAGATGGTTCTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30955141	30943333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954868_30954983_30955067
ENSMUSG00000044573.17_16	chr12	-	2742	6	FSM	ENSMUSG00000044573.17	ENSMUST00000074038.7	2754	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATACTTTGGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	30961581	30943659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_30945953_30946114_30946221_30947743_30947806_30954716_30954831_30955067_30955142_30961488
ENSMUSG00000044573.17_20	chr12	-	247	2	FSM	ENSMUSG00000044573.17	ENST00000405233.5	257	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGAGAGTCTGACCACCC	NA	NA	NA	NA	NA	NA	NA	NA	30955140	30954673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_30954831_30955050
ENSMUSG00000044600.15_0	chr8	-	2877	5	FSM	ENSMUSG00000044600.15	ENSMUST00000167290.8	2892	5	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAACATTCAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73324927	73319041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717_73324760_73324847
ENSMUSG00000044600.15_1	chr8	-	2798	4	FSM	ENSMUSG00000044600.15	ENSMUST00000058733.9	642	4	133	-2289	133	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAACATTCAGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	73324760	73319041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73321653_73322699_73322791_73323809_73323863_73324717
ENSMUSG00000044617.9_0	chr10	+	5935	2	FSM	ENSMUSG00000044617.9	ENSMUST00000054287.9	5960	2	0	25	0	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAACAGACAGAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127575406	127583193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127575532_127577383
ENSMUSG00000044626.14_0	chr16	-	1611	9	FSM	ENSMUSG00000044626.14	ENST00000296252.9	1617	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACACCCTCAGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	21803016	21774529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21794982_21795085_21800085_21800195_21802650
ENSMUSG00000044626.14_1	chr16	-	1504	8	FSM	ENSMUSG00000044626.14	ENST00000424591.6	1515	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCACACCCTCAGGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	21803011	21774529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21774928_21777530_21777705_21780894_21781007_21784703_21784800_21786734_21786895_21792803_21792898_21800085_21800195_21802650
ENSMUSG00000044627.12_0	chr2	-	754	5	FSM	ENSMUSG00000044627.12	ENSMUST00000183946.8	768	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGGTTCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	32178073	32168834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32169144_32170720_32170816_32171697_32171823_32177608_32177658_32177897
ENSMUSG00000044629.6_0	chr11	+	1637	3	FSM	ENSMUSG00000044629.6	ENSMUST00000058159.6	1654	3	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATGCCCCGACTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	17001829	17029366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17002349_17004630_17004782_17028399
ENSMUSG00000044629.6_1	chr11	+	420	3	FSM	ENSMUSG00000044629.6	ENST00000409559.7	423	3	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCCCTTCAAATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	17002172	17057632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17002349_17004630_17004782_17057539
ENSMUSG00000044636.7_0	chr15	-	4339	5	FSM	ENSMUSG00000044636.7	ENSMUST00000061457.7	4375	5	21	15	21	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGAAGAGAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	100393348	100377465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100380582_100382330_100382628_100385825_100386086_100387315_100387548_100392914
ENSMUSG00000044641.8_0	chr2	+	3378	3	FSM	ENSMUSG00000044641.8	ENSMUST00000052125.7	3399	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTACTTTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	167922934	167943113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167923280_167929261_167929485_167940303
ENSMUSG00000044645.9_0	chr17	+	1356	1	FSM	ENSMUSG00000044645.9	ENSMUST00000061681.9	756	1	-163	-437	-163	437	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATGAAAAAAAAATAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	51005552	51006908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_51005600_51006900
ENSMUSG00000044646.16_0	chr18	+	4561	5	FSM	ENSMUSG00000044646.16	ENSMUST00000058997.15	4572	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATGATATTGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75953248	76281624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75953437_76033618_76033833_76144699_76144762_76269897_76271122_76278751
ENSMUSG00000044646.16_1	chr18	+	2133	3	FSM	ENSMUSG00000044646.16	ENSMUST00000167921.2	2147	3	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGGGAAAATGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76192530	76279502	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_76192689_76269897_76271122_76278751
ENSMUSG00000044674.7_0	chr5	-	4178	1	FSM	ENSMUSG00000044674.7	ENSMUST00000054294.7	4197	1	8	11	8	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAATTACATTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	4808027	4803849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_4803800_4808000
ENSMUSG00000044700.16_0	chr4	-	3603	6	FSM	ENSMUSG00000044700.16	ENSMUST00000103208.2	3620	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTACCGCGTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	149822491	149809327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149811888_149812358_149812709_149813992_149814170_149815519_149815715_149816292_149816414_149822291
ENSMUSG00000044702.14_0	chr7	-	3731	13	FSM	ENSMUSG00000044702.14	ENSMUST00000098068.10	3750	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACATTCTGCTTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	121732158	121706492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_121706952_121709904_121710054_121711167_121711256_121712472_121712590_121713531_121713694_121716492_121716579_121720276_121720439_121722859_121722932_121723479_121724151_121726271_121727667_121728145_121728240_121728896_121728957_121731942
ENSMUSG00000044707.8_0	chr11	+	1378	6	FSM	ENSMUSG00000044707.8	ENST00000644313.1	1395	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCACACTTGGACCACAG	NA	NA	NA	NA	NA	NA	NA	NA	43419255	43476540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43419430_43420181_43420287_43447381_43447596_43470510_43470814_43474006_43474167_43476118
ENSMUSG00000044709.7_0	chr7	-	1021	3	FSM	ENSMUSG00000044709.7	ENSMUST00000117222.2	1023	3	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	19307747	19298871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19299602_19307233_19307470_19307692
ENSMUSG00000044709.7_1	chr7	-	961	2	FSM	ENSMUSG00000044709.7	ENSMUST00000051364.4	763	2	-196	-2	-154	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	19307464	19298871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19299602_19307233
ENSMUSG00000044712.16_0	chr12	+	3018	16	FSM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	14	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCTGGTTTTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73333566	73400823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852_73398948_73399230
ENSMUSG00000044712.16_5	chr12	+	3905	5	FSM	ENSMUSG00000044712.16	ENSMUST00000153941.8	3927	5	12	10	-11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAATACCAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	73333680	73361284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73357763
ENSMUSG00000044712.16_6	chr12	+	1295	15	ISM	ENSMUSG00000044712.16	ENSMUST00000140523.8	3032	16	145	1875	6	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTCCAACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	73333697	73398948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_73333807_73335166_73335298_73338933_73339008_73356918_73356972_73365750_73365791_73376753_73376833_73383795_73383879_73384283_73384343_73388181_73388248_73388480_73388535_73390442_73390523_73391566_73391668_73397287_73397413_73398524_73398670_73398852
ENSMUSG00000044715.8_0	chr12	+	1043	2	FSM	ENSMUSG00000044715.8	ENSMUST00000222284.2	1064	2	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAACACAGAATTTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	105651100	105665402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105651718_105664976
ENSMUSG00000044715.8_1	chr12	+	2710	3	FSM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAGTTGAGCATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105651645	105669275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_105651718_105664976_105665236_105666896
ENSMUSG00000044715.8_2	chr12	+	2641	2	ISM	ENSMUSG00000044715.8	ENSMUST00000051934.7	2720	3	13331	7	13331	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTGAGTTGAGCATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	105664973	105669275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_105665236_105666896
ENSMUSG00000044716.13_0	chr5	+	2769	7	FSM	ENSMUSG00000044716.13	ENSMUST00000114270.8	2779	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCCTTGCCTTGTTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	35214213	35238306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_35214333_35214435_35214482_35221677_35221909_35223793_35223995_35232646_35232767_35234491_35234612_35236374
ENSMUSG00000044730.18_0	chr4	+	2900	5	FSM	ENSMUSG00000044730.18	ENSMUST00000094769.13	2911	5	5	6	5	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTATATGACATTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	124830871	124838443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124831127_124832232_124832511_124834158_124834339_124836145_124836265_124836375
ENSMUSG00000044734.17_0	chr13	-	1860	6	ISM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	777	8	777	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGATGAAGCAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	33034391	33026082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221
ENSMUSG00000044734.17_1	chr13	-	1910	7	FSM	ENSMUSG00000044734.17	ENSMUST00000076352.8	1918	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTGATGAAGCAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	33035168	33026082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_33027206_33029291_33029460_33029653_33029797_33031372_33031491_33032601_33032740_33034221_33034398_33035124
ENSMUSG00000044763.9_0	chr16	-	2991	2	FSM	ENSMUSG00000044763.9	ENSMUST00000059052.9	3002	2	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCTATATTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	55858176	55852976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55855655_55857863
ENSMUSG00000044768.17_0	chr1	-	40357	3	FSM	ENSMUSG00000044768.17	ENSMUST00000053033.14	40378	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTTTAACTCATACAT	NA	NA	NA	NA	NA	NA	NA	NA	97589790	97534054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97574087_97582324_97582415_97589555
ENSMUSG00000044768.17_2	chr1	-	2609	3	FSM	ENSMUSG00000044768.17	ENST00000510890.1	2622	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAACATCCATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97588689	97571638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_97574087_97582324_97582415_97588618
ENSMUSG00000044768.17_3	chr1	-	2536	2	ISM	ENSMUSG00000044768.17	ENST00000510890.1	2622	3	6281	9	6281	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCAACATCCATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	97582412	97571638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_97574087_97582324
ENSMUSG00000044770.15_0	chr10	+	4839	9	FSM	ENSMUSG00000044770.15	ENSMUST00000063063.14	4885	9	30	16	30	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	42736395	42836760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_42736850_42783712_42783792_42788012_42788228_42800049_42800180_42806399_42806601_42810948_42811144_42822864_42823138_42831884_42832031_42833614
ENSMUSG00000044770.15_1	chr10	+	4130	7	FSM	ENSMUSG00000044770.15	ENSMUST00000105494.8	4166	7	22	14	22	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATAAATCTTAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	42736810	42836760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_42736850_42800049_42800180_42806399_42806601_42810948_42811144_42822864_42823138_42831884_42832031_42833614
ENSMUSG00000044770.15_2	chr10	+	4086	6	ISM	ENSMUSG00000044770.15	ENSMUST00000105494.8	4166	7	63269	11	63269	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATCTTAAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	42800057	42836763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_42800180_42806399_42806601_42810948_42811144_42822864_42823138_42831884_42832031_42833614
ENSMUSG00000044783.17_0	chr1	-	4857	8	FSM	ENSMUSG00000044783.17	ENSMUST00000054674.15	4878	8	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGAGATGAGGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	88205342	88190200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_88194381_88195669_88195749_88197042_88197136_88197923_88198022_88200450_88200488_88202763_88202820_88204940_88205008_88205095
ENSMUSG00000044783.17_6	chr1	-	2190	5	FSM	ENSMUSG00000044783.17	ENSMUST00000065420.12	2217	5	27	0	-24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCCACTCCCCCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	88205252	88192549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_88194381_88195669_88195749_88202763_88202820_88204940_88205008_88205095
ENSMUSG00000044786.7_0	chr7	-	2779	2	FSM	ENSMUSG00000044786.7	ENSMUST00000051241.7	2790	2	6	5	6	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGATGAAATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	28079672	28076213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28077919_28078598
ENSMUSG00000044786.7_1	chr7	-	1490	2	FSM	ENSMUSG00000044786.7	ENST00000597629.3	1505	2	10	5	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTGAACTGAGATGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	28077831	28076219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28076623_28076744
ENSMUSG00000044788.11_0	chr11	-	4908	6	FSM	ENSMUSG00000044788.11	ENSMUST00000056153.8	4951	6	34	9	34	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAACATGGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	115188306	115170456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115174482_115175025_115175206_115176124_115176313_115176943_115177125_115187363_115187531_115188139
ENSMUSG00000044791.17_0	chr9	+	8336	21	FSM	ENSMUSG00000044791.17	ENSMUST00000153838.8	8350	21	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAATCAGGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110361672	110447695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110361821_110374367_110374384_110376276_110380563_110382170_110382303_110385355_110385485_110390183_110390308_110392004_110392083_110393638_110393737_110396775_110396903_110398744_110398880_110401014_110401135_110402679_110403343_110419455_110419505_110421466_110421648_110423158_110423829_110428186_110428322_110431190_110431331_110433187_110433300_110443937_110444019_110446501_110446604_110446885
ENSMUSG00000044792.8_0	chr13	-	1926	4	FSM	ENSMUSG00000044792.8	ENSMUST00000057115.7	1942	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1849	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTAGTGGTTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	59917614	59903228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_59904818_59906703_59906810_59910555_59910610_59917437
ENSMUSG00000044795.13_0	chr11	-	999	4	FSM	ENSMUSG00000044795.13	ENSMUST00000108660.8	1034	4	25	10	25	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGACAGGATTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	69286134	69284098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69284627_69285453_69285673_69285797_69285875_69285959
ENSMUSG00000044795.13_2	chr11	-	736	4	FSM	ENSMUSG00000044795.13	ENSMUST00000051620.5	753	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAAGATGTTGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	69286150	69284445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69284695_69285453_69285673_69285797_69285875_69285959
ENSMUSG00000044807.14_0	chr11	-	5304	5	FSM	ENSMUSG00000044807.14	ENSMUST00000109135.9	5325	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCAAAAATGATTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	50718507	50701923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50706821_50707945_50708039_50708635_50708763_50717252_50717338_50718405
ENSMUSG00000044813.16_0	chr4	-	2219	6	FSM	ENSMUSG00000044813.16	ENSMUST00000061986.12	2244	6	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAATATATATTATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	45530315	45423287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45424124_45444678_45444799_45447505_45447678_45458126_45458343_45489054_45489176_45529561
ENSMUSG00000044814.7_0	chr7	-	970	1	FSM	ENSMUSG00000044814.7	ENSMUST00000061482.6	1130	1	4	156	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1258	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAGTCACCCCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	102127105	102126135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_102126100_102127100
ENSMUSG00000044814.7_1	chr7	-	1004	2	FSM	ENSMUSG00000044814.7	ENST00000641245.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGCAGTCACCCCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	102130819	102126135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_102127118_102130797
ENSMUSG00000044827.11_0	chr5	-	2965	3	ISM	ENSMUSG00000044827.11	ENSMUST00000197315.5	3025	4	476	9	-324	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATATTTTGGGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	65090428	65082030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_65084642_65087497_65087567_65090143
ENSMUSG00000044827.11_1	chr5	-	3016	4	FSM	ENSMUSG00000044827.11	ENSMUST00000197315.5	3025	4	0	9	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTATATTTTGGGTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	65090904	65082030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65084642_65087497_65087567_65090143_65090444_65090868
ENSMUSG00000044847.14_0	chr11	-	6425	4	FSM	ENSMUSG00000044847.14	ENSMUST00000129820.8	6453	4	23	5	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCATTTGCTTGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	45835739	45819100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_45824851_45825247_45825332_45828185_45828326_45835288
ENSMUSG00000044854.8_0	chr1	-	959	1	FSM	ENSMUSG00000044854.8	ENSMUST00000050306.8	967	1	8	0	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTTCAGATGTCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	183766187	183765228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_183765200_183766200
ENSMUSG00000044857.9_0	chr17	-	2613	9	FSM	ENSMUSG00000044857.9	ENSMUST00000055117.9	2627	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACGGATGTGGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	27423437	27408581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27409765_27411905_27412009_27412076_27412179_27412811_27412958_27414298_27414379_27415109_27415187_27418336_27418413_27420610_27420652_27422632
ENSMUSG00000044864.17_0	chr3	-	7918	4	FSM	ENSMUSG00000044864.17	ENST00000504087.6	7931	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACTTACAGTAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	38538083	38503755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_38506655_38508189_38511735_38517048_38517279_38536839
ENSMUSG00000044876.16_0	chr7	+	5100	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108567.9	5104	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGTTGCCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6175480	6196806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6175537_6176980_6177101_6186788_6187202_6191132_6191242_6192404
ENSMUSG00000044876.16_1	chr7	+	2460	4	FSM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCATGCCCGGTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	6175501	6194342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6175574_6186860_6187202_6191132_6191242_6192404
ENSMUSG00000044876.16_4	chr7	+	1643	5	FSM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	6175511	6193415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6175574_6176980_6177101_6186860_6187202_6191132_6191242_6192404
ENSMUSG00000044876.16_6	chr7	+	5037	4	ISM	ENSMUSG00000044876.16	ENSMUST00000108567.9	5104	5	1507	4	-46	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAAGTTGCCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6176987	6196806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_6177101_6186788_6187202_6191132_6191242_6192404
ENSMUSG00000044876.16_7	chr7	+	1576	4	ISM	ENSMUSG00000044876.16	ENSMUST00000108566.8	1648	5	1474	5	-48	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGAGTCTGACTCTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	6176985	6193415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_6177101_6186860_6187202_6191132_6191242_6192404
ENSMUSG00000044876.16_8	chr7	+	2385	3	ISM	ENSMUSG00000044876.16	ENSMUST00000054680.12	2467	4	11363	6	9830	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCATGCCCGGTTCTCG	NA	NA	NA	NA	NA	NA	NA	NA	6186863	6194342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_6187202_6191132_6191242_6192404
ENSMUSG00000044881.8_0	chr7	+	1378	2	FSM	ENSMUSG00000044881.8	ENSMUST00000054310.4	1391	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACACCTAGTCTGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100186316	100189573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100186400_100188278
ENSMUSG00000044881.8_1	chr7	+	729	2	FSM	ENSMUSG00000044881.8	ENSMUST00000120454.3	742	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAGCAACACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	100186438	100188973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100186473_100188278
ENSMUSG00000044881.8_2	chr7	+	707	1	NIC	ENSMUSG00000044881.8	novel	1391	2	NA	NA	1839	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTCAAAGGAGTGAACT	NA	NA	NA	NA	NA	NA	NA	NA	100188277	100188984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_100188300_100189000
ENSMUSG00000044894.15_0	chr11	-	1498	2	FSM	ENSMUSG00000044894.15	ENSMUST00000061326.5	1521	2	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATAATTAATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	53321636	53318753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53319978_53321362
ENSMUSG00000044894.15_2	chr11	-	399	3	FSM	ENSMUSG00000044894.15	ENSMUST00000109021.4	405	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCCCTTTGTGACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	53321654	53319785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53319978_53321362_53321530_53321614
ENSMUSG00000044906.7_0	chr18	-	2278	9	FSM	ENSMUSG00000044906.7	ENSMUST00000067556.4	2291	9	8	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATGAAAACAAAAGGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	70605543	70586215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70600829_70601589_70602519_70602849_70604743_70605051_70605361
ENSMUSG00000044906.7_6	chr18	-	742	6	FSM	ENSMUSG00000044906.7	ENST00000578138.5	748	6	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCCCGATTTTATATGA	NA	NA	NA	NA	NA	NA	NA	NA	70605541	70586229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405_70600557_70605486
ENSMUSG00000044906.7_7	chr18	-	675	5	ISM	ENSMUSG00000044906.7	ENSMUST00000211817.2	913	6	2277	-31	2277	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATAGGCCCGATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	70600548	70586233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_70586460_70589544_70589616_70591387_70591520_70597032_70597136_70600405
ENSMUSG00000044912.12_0	chr12	+	1695	4	FSM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATTTCCAAAAAATCACA	NA	NA	NA	NA	NA	NA	NA	NA	74279924	74314396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_74280004_74281582_74282024_74284954_74285145_74313411
ENSMUSG00000044912.12_4	chr12	+	1617	3	ISM	ENSMUSG00000044912.12	ENST00000430451.3	1706	4	1660	8	1660	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATTTCCAAAAAATCACA	NA	NA	NA	NA	NA	NA	NA	NA	74281581	74314396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_74282024_74284954_74285145_74313411
ENSMUSG00000044927.7_0	chr6	-	1205	1	FSM	ENSMUSG00000044927.7	ENSMUST00000056403.7	1217	1	4	8	4	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTGACCATTGTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	87958615	87957410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87957400_87958600
ENSMUSG00000044934.14_0	chr13	-	3512	5	FSM	ENSMUSG00000044934.14	ENSMUST00000059817.12	3532	5	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGCATAAAGTACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	64301007	64280842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_64283351_64290021_64290161_64291968_64292089_64293343_64293495_64300413
ENSMUSG00000044938.9_0	chr9	+	6467	3	FSM	ENSMUSG00000044938.9	ENSMUST00000057781.8	6494	3	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAAGAGTTTGATCC	NA	NA	NA	NA	NA	NA	NA	NA	77543797	77567398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_77544070_77557252_77558458_77562408
ENSMUSG00000044949.5_0	chr11	+	1000	3	FSM	ENSMUSG00000044949.5	ENSMUST00000051053.5	1012	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTATAATTACAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	32405375	32466681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32405547_32449224_32449462_32466089
ENSMUSG00000044950.8_0	chr11	+	1797	4	FSM	ENSMUSG00000044950.8	ENSMUST00000094294.5	1814	4	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTATATATATATATAGA	NA	NA	NA	NA	NA	NA	NA	NA	43572893	43611230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43573444_43595360_43596305_43607856_43607977_43611047
ENSMUSG00000044950.8_1	chr11	+	1843	3	FSM	ENSMUSG00000044950.8	ENST00000429776.2	1854	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGACACAATTTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	43573314	43597005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43573444_43577183_43577253_43595360
ENSMUSG00000044952.6_0	chr7	+	2953	2	FSM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATGACAATTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	96981535	96999409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_96981579_96996499
ENSMUSG00000044952.6_1	chr7	+	2908	1	ISM	ENSMUSG00000044952.6	ENSMUST00000054107.6	2966	2	14970	9	14970	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACAATTACTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	96996503	96999411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_96996500_96999400
ENSMUSG00000044968.17_0	chr5	-	3936	5	FSM	ENSMUSG00000044968.17	ENSMUST00000115217.8	3954	5	9	9	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTGAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21906383	21867907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21905972
ENSMUSG00000044968.17_1	chr5	-	3693	5	FSM	ENSMUSG00000044968.17	ENSMUST00000060899.9	3724	5	17	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTATAAAAGTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	21906377	21867914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_21870361_21875486_21875602_21880452_21881100_21888153_21888464_21906202
ENSMUSG00000044982.8_0	chr18	-	2707	1	FSM	ENSMUSG00000044982.8	ENSMUST00000054984.8	2727	1	10	10	10	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTCAAAACATGAGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	32044867	32042160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_32042200_32044900
ENSMUSG00000044986.11_0	chr15	-	1130	2	FSM	ENSMUSG00000044986.11	ENSMUST00000058659.9	1144	2	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTGTGTCTGCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78290097	78283759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_78284231_78289438
ENSMUSG00000044991.11_0	chr2	+	1068	3	FSM	ENSMUSG00000044991.11	ENSMUST00000061891.11	1076	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCATCCTTGACTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	132528851	132592968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132528902_132533869_132534052_132592132
ENSMUSG00000044991.11_1	chr2	+	1004	2	ISM	ENSMUSG00000044991.11	ENSMUST00000110132.3	1471	3	1687	1	1687	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTGACTCAGTCTATTT	NA	NA	NA	NA	NA	NA	NA	NA	132533889	132592974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_132534052_132592132
ENSMUSG00000044997.4_0	chr7	+	675	3	FSM	ENSMUSG00000044997.4	ENSMUST00000187873.2	696	3	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATTAAAAAAAAAAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	35502032	35537494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_35502447_35511933_35512013_35537312
ENSMUSG00000045007.10_0	chr11	+	1718	11	FSM	ENSMUSG00000045007.10	ENSMUST00000043654.10	1754	11	27	9	27	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATTGAGCAGAGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	101046759	101052604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101046995_101047273_101047387_101047578_101047747_101048277_101048347_101048608_101048689_101049834_101049962_101050882_101050970_101051072_101051223_101051619_101051773_101051852_101052015_101052230
ENSMUSG00000045008.3_0	chr10	+	1842	1	FSM	ENSMUSG00000045008.3	ENSMUST00000238274.2	1864	1	15	7	15	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAATAAGAAGCCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	43050709	43052551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43050700_43052600
ENSMUSG00000045009.10_0	chr6	-	3048	4	FSM	ENSMUSG00000045009.10	ENST00000412055.6	3064	4	8	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAGCTCTAAGCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	113478893	113471263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113473027_113473892_113474046_113474228_113475278_113478810
ENSMUSG00000045009.10_3	chr6	-	1299	3	FSM	ENSMUSG00000045009.10	ENST00000411976.2	1306	3	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCAAGAACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	113478881	113473866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113474046_113474228_113475278_113478810
ENSMUSG00000045009.10_4	chr6	-	1226	2	ISM	ENSMUSG00000045009.10	ENST00000411976.2	1306	3	3608	5	3503	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGAAACCAAGAACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	113475276	113473867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113474046_113474228
ENSMUSG00000045031.19_0	chr3	-	1796	4	FSM	ENSMUSG00000045031.19	ENSMUST00000071400.13	1808	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAAATCTCAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	37366589	37361903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37363331_37363493_37363632_37364441_37364589_37366505
ENSMUSG00000045031.19_1	chr3	-	1713	3	ISM	ENSMUSG00000045031.19	ENSMUST00000071400.13	1808	4	2006	6	1980	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAAATCTCAGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	37364589	37361903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_37363331_37363493_37363632_37364441
ENSMUSG00000045031.19_4	chr3	-	1058	5	FSM	ENSMUSG00000045031.19	ENSMUST00000102955.11	1064	5	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTATCTTCTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	37366591	37362772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441_37364589_37366505
ENSMUSG00000045031.19_5	chr3	-	2975	4	FSM	ENSMUSG00000045031.19	ENSMUST00000140956.8	2981	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGTATCTTCTGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	37366589	37362770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37363331_37363493_37363632_37364085_37364215_37364441
ENSMUSG00000045038.15_1	chr17	+	726	5	FSM	ENSMUSG00000045038.15	ENST00000394874.1	746	5	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACCAACAGATGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	86795593	86803805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_86795731_86798178_86798276_86800648_86800849_86803365_86803540_86803687
ENSMUSG00000045039.10_1	chr7	+	10014	41	FSM	ENSMUSG00000045039.10	ENSMUST00000128119.2	10040	41	17	9	17	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACTTGTGCATCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	25016605	25065333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25017119_25025804_25025969_25026894_25027102_25027909_25028091_25028176_25028266_25029285_25029702_25030110_25030257_25030438_25030562_25033182_25033338_25033553_25033674_25033990_25034136_25034216_25034381_25037198_25037400_25037783_25037985_25038889_25039127_25039643_25039763_25039841_25039974_25040057_25040172_25040396_25040646_25041122_25041323_25041637_25041849_25041944_25042195_25043090_25043224_25045524_25045773_25045850_25045962_25046100_25046220_25046740_25046949_25047648_25047830_25048339_25048504_25049079_25049225_25053150_25053383_25054437_25054562_25054726_25054941_25055158_25055374_25057669_25057878_25058040_25058201_25058478_25058672_25059167_25059339_25059533_25059665_25060078_25060212_25062746
ENSMUSG00000045045.8_0	chr19	-	1512	3	FSM	ENSMUSG00000045045.8	ENST00000393952.3	1533	3	13	8	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCAGTGTTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4665147	4661819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4662033_4663400_4664543_4664990
ENSMUSG00000045045.8_1	chr19	-	2899	3	FSM	ENSMUSG00000045045.8	ENSMUST00000113822.3	2918	3	12	7	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCAGTGTTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4665683	4661819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4662667_4663183_4664543_4664990
ENSMUSG00000045045.8_2	chr19	-	3183	2	FSM	ENSMUSG00000045045.8	ENSMUST00000053597.3	3194	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTCAGTGTTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4665519	4661819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4662667_4663183
ENSMUSG00000045064.6_0	chr12	+	2404	3	FSM	ENSMUSG00000045064.6	ENST00000674097.1	2419	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGATGGAAGAAGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	85334465	85344109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85335103_85336325_85337159_85343175
ENSMUSG00000045064.6_7	chr12	+	1337	2	FSM	ENSMUSG00000045064.6	ENST00000439583.2	1352	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGCATTAAAGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	85336333	85343687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_85337159_85343175
ENSMUSG00000045071.15_0	chr4	+	10819	4	FSM	ENSMUSG00000045071.15	ENSMUST00000070150.11	10856	4	9	28	9	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	59626219	59761411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59626492_59690143_59691339_59737561_59737735_59752232
ENSMUSG00000045071.15_1	chr4	+	3196	3	FSM	ENSMUSG00000045071.15	ENSMUST00000052420.7	3205	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCTCATTTTTACTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	59626251	59721401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59626492_59690143_59691339_59719640
ENSMUSG00000045078.13_0	chr5	-	4464	17	FSM	ENSMUSG00000045078.13	ENSMUST00000053498.13	4474	17	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACGCTTCTCTTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	143098746	142976654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142978721_142979256_142979327_143001378_143001602_143013700_143013799_143054071_143054151_143054600_143054750_143061481_143061620_143063181_143063233_143065978_143066119_143066717_143066833_143071625_143071791_143073273_143073377_143075497_143075575_143075874_143076514_143078749_143078881_143084133_143084261_143098653
ENSMUSG00000045078.13_20	chr5	-	403	4	FSM	ENSMUSG00000045078.13	ENST00000406608.2	412	4	3	6	-2	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGAAGCTGAATGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	143084202	143066715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143066833_143071625_143071740_143073273_143073377_143084133
ENSMUSG00000045078.13_26	chr5	-	443	4	FSM	ENSMUSG00000045078.13	ENST00000674911.1	450	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGTAATGGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	143084199	143066723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143066833_143071625_143071791_143073273_143073377_143084133
ENSMUSG00000045078.13_27	chr5	-	373	3	ISM	ENSMUSG00000045078.13	ENST00000674911.1	450	4	10828	6	10828	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGTAATGGGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	143073372	143066723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_143066833_143071625_143071791_143073273
ENSMUSG00000045083.15_0	chr4	-	2906	3	FSM	ENSMUSG00000045083.15	ENSMUST00000065173.9	2910	3	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACAGAATGGAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	35845202	35707407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35710014_35765049_35765157_35845009
ENSMUSG00000045083.15_1	chr4	-	2398	3	FSM	ENSMUSG00000045083.15	ENSMUST00000108124.4	2414	3	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGCAAAACTAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	36056720	35707852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35710014_35890025_35890184_36056641
ENSMUSG00000045083.15_2	chr4	-	2327	2	ISM	ENSMUSG00000045083.15	ENSMUST00000108124.4	2414	3	166540	5	-44982	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACTAAAAGGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35890186	35707847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_35710014_35890025
ENSMUSG00000045092.9_0	chr3	-	3036	2	FSM	ENSMUSG00000045092.9	ENSMUST00000055676.4	3046	2	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGATTCTTTTGTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	115508717	115504087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115506764_115508357
ENSMUSG00000045092.9_3	chr3	-	2633	2	FSM	ENSMUSG00000045092.9	ENST00000475289.2	2650	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCTTTAGTCTGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115507353	115504232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115506764_115507251
ENSMUSG00000045095.17_0	chr6	-	4043	22	FSM	ENSMUSG00000045095.17	ENST00000402939.6	4054	22	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCAGCATTGCAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	93920293	93655229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_93655984_93659932_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93670988_93671190_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
ENSMUSG00000045095.17_18	chr6	-	3207	20	FSM	ENSMUSG00000045095.17	ENST00000497477.6	3217	20	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCATGTGGTTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	93920293	93659813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_93660072_93662534_93662679_93663557_93663619_93663762_93663857_93674174_93674469_93676596_93676790_93678270_93678363_93684984_93685202_93694220_93694253_93722414_93723036_93724172_93724356_93731994_93732088_93734635_93734746_93737688_93737747_93746488_93746525_93750587_93750671_93762425_93762628_93769327_93769535_93792686_93792807_93920184
ENSMUSG00000045098.20_0	chr19	+	6101	13	FSM	ENSMUSG00000045098.20	ENSMUST00000113973.8	6130	13	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAATGATCTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	3817438	3868291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3817731_3818021_3818341_3832219_3832280_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
ENSMUSG00000045098.20_1	chr19	+	2944	10	FSM	ENSMUSG00000045098.20	ENSMUST00000113970.8	2975	10	25	6	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAACTTTGTTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	3818057	3858829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3846639_3846709_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224
ENSMUSG00000045098.20_2	chr19	+	3914	10	FSM	ENSMUSG00000045098.20	ENSMUST00000176262.8	3933	10	1	18	1	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAGGAGATTATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	3818166	3866670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_3818341_3836388_3836628_3843067_3843216_3852074_3852241_3852787_3852898_3854394_3854562_3854813_3854834_3854916_3855054_3857224_3857422_3864114
ENSMUSG00000045100.12_0	chr6	+	1913	10	FSM	ENSMUSG00000045100.12	ENSMUST00000061118.11	1922	10	9	0	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGCCTCTCAGAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	94477320	94581653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_94477439_94484494_94484652_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392_94569463_94575360_94575426_94576159_94576234_94580532
ENSMUSG00000045100.12_1	chr6	+	482	6	FSM	ENSMUSG00000045100.12	ENST00000336733.10	496	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGCAAGGGATTATATTG	NA	NA	NA	NA	NA	NA	NA	NA	94477332	94569460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_94477439_94487732_94487843_94511124_94511230_94512701_94512750_94553314_94553360_94569392
ENSMUSG00000045102.13_0	chr5	-	2581	24	FSM	ENSMUSG00000045102.13	ENST00000382865.5	2589	24	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTGACCTCAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	34307185	34164782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34164854_34166183_34166246_34166930_34166999_34170845_34170925_34171586_34171698_34181649_34181782_34190089_34190173_34234440_34234556_34236259_34236338_34237245_34237304_34261241_34261308_34262519_34262574_34264430_34264488_34265657_34265754_34266694_34266779_34270652_34270718_34271422_34271484_34272703_34272773_34274152_34274311_34276229_34276343_34279949_34280141_34286446_34286939_34290441_34290535_34307060
ENSMUSG00000045103.20_0	chrX	+	5131	35	FSM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	5928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACACACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	83120258	84246565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_83120352_83315557_83315734_83353404_83353547_83356082_83356233_83416988_83417154_83469313_83469416_83475489_83475599_83517739_83517973_83575479_83575598_83619165_83619378_83642701_83642857_83690642_83690833_83817187_83817361_83825524_83825682_83860903_83861025_83861632_83861902_83892253_83892401_83987750_83987830_84018310_84018372_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ENSMUSG00000045103.20_57	chrX	+	5040	34	ISM	ENSMUSG00000045103.20	ENST00000474231.5	5148	35	195303	11	195303	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACACACACGCAC	NA	NA	NA	NA	NA	NA	NA	NA	83315555	84246565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_83315734_83353404_83353547_83356082_83356233_83416988_83417154_83469313_83469416_83475489_83475599_83517739_83517973_83575479_83575598_83619165_83619378_83642701_83642857_83690642_83690833_83817187_83817361_83825524_83825682_83860903_83861025_83861632_83861902_83892253_83892401_83987750_83987830_84018310_84018372_84097576_84097639_84133422_84133498_84148749_84148952_84151185_84151272_84153548_84153707_84182933_84183101_84185331_84185444_84187634_84187772_84188516_84188556_84192735_84192802_84193818_84193885_84196632_84196792_84221309_84221554_84222304_84222429_84234215_84234309_84246076
ENSMUSG00000045103.20_74	chrX	+	804	3	FSM	ENSMUSG00000045103.20	ENST00000681870.1	815	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGAGCATCTGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	84091935	84115203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_84092066_84097576_84097639_84114591
ENSMUSG00000045107.6_0	chr14	-	2293	2	FSM	ENSMUSG00000045107.6	ENSMUST00000059666.6	2315	2	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTTACTGATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	20133239	20125713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20127713_20132945
ENSMUSG00000045114.11_0	chr7	-	1928	3	FSM	ENSMUSG00000045114.11	ENST00000637403.1	1942	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGCAGAGAGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126619522	126616905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126617903_126618055_126618189_126618724
ENSMUSG00000045114.11_1	chr7	-	1517	3	FSM	ENSMUSG00000045114.11	ENST00000637565.1	1537	3	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGCAGAGAGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	126619516	126616905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126617903_126618055_126618178_126619118
ENSMUSG00000045128.10_0	chr8	-	1252	5	FSM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	17769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCATAAGAGGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	71350056	71347373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71350002
ENSMUSG00000045128.10_1	chr8	-	1191	4	ISM	ENSMUSG00000045128.10	ENSMUST00000054220.10	1260	5	1107	8	978	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCATAAGAGGGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	71348949	71347373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776
ENSMUSG00000045128.10_7	chr8	-	678	5	FSM	ENSMUSG00000045128.10	ENSMUST00000212709.2	700	5	11	11	11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGAGACTGTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	71349916	71348037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71348152_71348243_71348354_71348559_71348690_71348776_71348957_71349772
ENSMUSG00000045136.7_0	chr13	-	2167	4	FSM	ENSMUSG00000045136.7	ENSMUST00000075774.5	2182	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCTTCTTACACACGCT	NA	NA	NA	NA	NA	NA	NA	NA	34314328	34310736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34312515_34312854_34312966_34313228_34313338_34314159
ENSMUSG00000045160.15_4	chr6	+	2293	4	FSM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACCCATCAAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	83326436	83337108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83326537_83328247_83328372_83330023_83330113_83335128
ENSMUSG00000045160.15_7	chr6	+	2194	3	ISM	ENSMUSG00000045160.15	ENSMUST00000136501.2	2312	4	1819	10	1819	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACACCCATCAAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	83328246	83337108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_83328372_83330023_83330113_83335128
ENSMUSG00000045165.7_0	chr7	+	1914	2	FSM	ENSMUSG00000045165.7	ENSMUST00000056288.7	1932	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAATCCTTTTTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	126690540	126693150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126690645_126691340
ENSMUSG00000045176.4_0	chr11	+	1848	1	FSM	ENSMUSG00000045176.4	ENSMUST00000051888.4	1862	1	12	2	12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	217	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTGAGCCTGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	68950554	68952402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68950600_68952400
ENSMUSG00000045193.14_0	chr10	+	1306	7	FSM	ENSMUSG00000045193.14	ENSMUST00000105365.9	1321	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATCTCGCTCTGACC	NA	NA	NA	NA	NA	NA	NA	NA	80003619	80007482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80003751_80005641_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527_80006599_80006815
ENSMUSG00000045193.14_4	chr10	+	633	6	FSM	ENSMUSG00000045193.14	ENST00000586773.5	644	6	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAGTCTAGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80003671	80006595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80003751_80005592_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ENSMUSG00000045193.14_8	chr10	+	555	5	ISM	ENSMUSG00000045193.14	ENST00000586773.5	644	6	1926	5	1926	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAGTCTAGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	80005591	80006595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_80005751_80005849_80005957_80006035_80006175_80006258_80006341_80006527
ENSMUSG00000045205.17_0	chr4	-	6740	19	FSM	ENSMUSG00000045205.17	ENSMUST00000084892.12	6754	19	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGTCTTTAACTCGTAC	NA	NA	NA	NA	NA	NA	NA	NA	11322131	11261322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11265943_11267612_11267772_11273006_11273140_11276863_11276947_11277928_11277986_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11309365_11309491_11317072_11317181_11321999
ENSMUSG00000045205.17_3	chr4	-	1556	13	FSM	ENSMUSG00000045205.17	ENST00000456901.1	1568	13	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCTTCCAATCTTGACA	NA	NA	NA	NA	NA	NA	NA	NA	11317158	11265795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11265943_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299_11304391_11317072
ENSMUSG00000045205.17_4	chr4	-	1477	12	ISM	ENSMUSG00000045205.17	ENST00000456901.1	1568	13	12773	0	12773	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAATCTTGACAAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	11304390	11265788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_11265943_11281003_11281125_11285053_11285174_11287474_11287634_11289669_11289744_11290190_11290290_11290390_11290523_11292553_11292689_11295935_11296060_11303311_11303458_11303946_11304069_11304299
ENSMUSG00000045210.9_0	chr1	-	9724	3	FSM	ENSMUSG00000045210.9	ENSMUST00000057438.7	9749	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGTTGAAGTAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	9818594	9788858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_9795576_9807190_9807278_9815674
ENSMUSG00000045211.6_0	chr14	+	3912	3	FSM	ENSMUSG00000045211.6	ENSMUST00000089049.4	3926	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGGAGTACACACCTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	70815085	70820006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70815551_70816351_70816566_70816773
ENSMUSG00000045211.6_1	chr14	+	3612	2	FSM	ENSMUSG00000045211.6	ENSMUST00000228554.2	3619	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAACCAAACATAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70815286	70820121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_70815551_70816773
ENSMUSG00000045216.8_0	chr1	+	3699	2	FSM	ENSMUSG00000045216.8	ENSMUST00000088174.4	3719	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTCATTGTGTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	36107491	36145518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36108266_36142593
ENSMUSG00000045237.6_0	chrX	+	1075	3	FSM	ENSMUSG00000045237.6	ENSMUST00000053981.6	1094	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTATGAAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	69429494	69433016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_69429758_69431499_69431773_69432477
ENSMUSG00000045248.7_0	chr8	-	2985	3	FSM	ENSMUSG00000045248.7	ENSMUST00000058534.7	2997	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACAAACCAGTTTTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	73302107	73248409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73250951_73251366_73251442_73301738
ENSMUSG00000045251.14_0	chr7	-	789	2	FSM	ENSMUSG00000045251.14	ENST00000563276.5	807	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAAAGGCGGGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	127020678	127018122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127018793_127020559
ENSMUSG00000045251.14_4	chr7	-	996	3	FSM	ENSMUSG00000045251.14	ENSMUST00000106300.2	1015	3	19	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTTTTGTGTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127021187	127018138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127018814_127020576_127020691_127020980
ENSMUSG00000045251.14_7	chr7	-	966	3	FSM	ENSMUSG00000045251.14	ENST00000223459.11	978	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCCCCTCCCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	127021173	127018150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127018793_127020559_127020691_127020980
ENSMUSG00000045252.12_0	chr7	+	4112	2	FSM	ENSMUSG00000045252.12	ENSMUST00000179556.2	4140	2	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAATGGAAATGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	24776642	24782902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24776812_24778959
ENSMUSG00000045252.12_1	chr7	+	3128	2	FSM	ENSMUSG00000045252.12	ENSMUST00000053410.11	3145	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTATGCTTTTTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	24776719	24781899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24776908_24778959
ENSMUSG00000045257.11_0	chr17	+	635	5	FSM	ENSMUSG00000045257.11	ENSMUST00000061703.10	644	5	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACACCTTTTTGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	80597645	80604898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_80597767_80599753_80599808_80601898_80602006_80602941_80603079_80604682
ENSMUSG00000045268.14_0	chr4	-	1571	2	FSM	ENSMUSG00000045268.14	ENSMUST00000106355.5	1588	2	6	11	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAGAACCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119031386	119026720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119028240_119031334
ENSMUSG00000045268.14_1	chr4	-	2330	2	FSM	ENSMUSG00000045268.14	ENSMUST00000052715.10	2341	2	0	11	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAGAACCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119031053	119026720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119028240_119030242
ENSMUSG00000045268.14_2	chr4	-	1501	1	ISM	ENSMUSG00000045268.14	ENSMUST00000052715.10	2341	2	2832	11	2832	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAGAACCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119028221	119026720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_119026700_119028200
ENSMUSG00000045268.14_3	chr4	-	1696	2	FSM	ENSMUSG00000045268.14	ENSMUST00000179290.8	1721	2	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAAGAACCTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119031036	119026720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119028240_119030859
ENSMUSG00000045273.9_0	chr13	-	1228	9	FSM	ENSMUSG00000045273.9	ENSMUST00000075550.4	1251	9	7	16	7	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAAAAAAAGAATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	100912400	100896197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100896703_100898268_100898433_100900057_100900110_100900676_100900741_100903332_100903390_100907702_100907778_100908162_100908212_100909233_100909290_100912194
ENSMUSG00000045275.18_0	chr16	-	1357	7	FSM	ENSMUSG00000045275.18	ENST00000288350.8	1384	7	12	15	12	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACCAAGAAAAGAGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	95980128	95960989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95961065_95963182_95963301_95963758_95963863_95965115_95965201_95974932_95975071_95976952_95977468_95979806
ENSMUSG00000045275.18_4	chr16	-	881	3	FSM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTCACTAAAATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95980130	95976218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_95976255_95976946_95977468_95979806
ENSMUSG00000045275.18_8	chr16	-	850	2	ISM	ENSMUSG00000045275.18	ENST00000485895.6	896	3	5	733	5	-733	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCAGAAGTTCCAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	95980135	95976946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_95977468_95979806
ENSMUSG00000045281.6_0	chr15	-	2130	2	FSM	ENSMUSG00000045281.6	ENSMUST00000064166.5	2144	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCAAACTCAGGGCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	73579348	73566460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73568412_73579169
ENSMUSG00000045294.12_0	chr5	+	2679	5	FSM	ENSMUSG00000045294.12	ENSMUST00000059155.11	2697	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCAGCTGTTGTATTCC	NA	NA	NA	NA	NA	NA	NA	NA	28276371	28283653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_28276794_28278544_28278670_28279479_28279647_28280059_28280160_28281788
ENSMUSG00000045294.12_4	chr5	+	742	3	FSM	ENSMUSG00000045294.12	ENST00000342407.5	752	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGGGTTGAGAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	28276627	28282264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_28276794_28280059_28280160_28281788
ENSMUSG00000045302.14_0	chr5	-	6288	9	FSM	ENSMUSG00000045302.14	ENSMUST00000074840.12	6300	9	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAGATTGTGTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	31117694	31108197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_10	chr5	-	1701	8	FSM	ENSMUSG00000045302.14	ENST00000406567.7	1721	8	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTTAATAAAGAGAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	31117502	31112418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31113082_31113273_31113434_31113605_31113679_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045302.14_6	chr5	-	1842	8	FSM	ENSMUSG00000045302.14	ENSMUST00000202567.2	1869	8	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCGAGAGCCCAGCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	31117604	31112393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31113082_31113605_31113679_31115231_31115406_31115576_31115702_31115814_31115896_31116059_31116281_31116566_31116757_31117314
ENSMUSG00000045312.13_0	chr13	+	4337	4	FSM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCATTCTTTCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94194308	94331911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94194415_94257284_94257344_94310530_94311147_94328355
ENSMUSG00000045312.13_1	chr13	+	4233	3	ISM	ENSMUSG00000045312.13	ENSMUST00000054274.8	4348	4	62979	6	-52035	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCATTCTTTCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94257282	94331911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_94257344_94310530_94311147_94328355
ENSMUSG00000045312.13_2	chr13	+	4176	2	FSM	ENSMUSG00000045312.13	ENSMUST00000121618.2	4209	2	27	6	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGCATTCTTTCAAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	94310526	94331911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_94311147_94328355
ENSMUSG00000045316.6_0	chr17	-	1444	1	FSM	ENSMUSG00000045316.6	ENSMUST00000049642.6	1473	1	21	8	21	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAAGAGCACTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	25069317	25067873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25067900_25069300
ENSMUSG00000045319.14_0	chr2	-	4386	4	FSM	ENSMUSG00000045319.14	ENSMUST00000114942.9	4398	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6135014	6102421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_6106172_6107623_6107877_6118703_6118925_6134852
ENSMUSG00000045328.12_0	chr3	+	7892	46	FSM	ENSMUSG00000045328.12	ENSMUST00000062893.12	7910	46	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACATAAGATAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	134918306	134979363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_134918476_134920864_134920957_134922092_134922183_134922306_134922426_134923013_134923134_134923793_134923876_134924234_134924303_134924384_134924451_134926040_134926093_134927988_134928077_134928930_134929061_134930717_134930838_134934517_134934677_134935808_134935966_134937125_134937215_134938657_134938826_134939488_134939564_134939731_134939852_134940593_134940717_134940826_134940984_134941217_134941373_134943263_134943579_134943687_134943961_134944075_134944232_134945517_134945710_134946708_134946868_134947823_134948115_134948237_134948394_134949360_134949640_134952247_134952407_134952577_134952863_134953098_134953387_134953830_134953990_134954142_134954425_134955416_134955576_134957182_134957444_134961207_134961310_134962237_134962457_134964952_134965148_134965739_134965944_134967279_134967508_134970068_134970182_134971671_134971770_134974700_134974882_134976434_134976722_134978911
ENSMUSG00000045350.16_0	chr15	-	9309	8	FSM	ENSMUSG00000045350.16	ENSMUST00000100209.6	9320	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTACTCTTTGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	99864938	99816240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99816354_99825580_99825761_99827710_99827860_99831399_99831593_99837678_99845657_99852630_99852802_99853323_99853541_99864630
ENSMUSG00000045374.19_0	chr11	-	6882	10	FSM	ENSMUSG00000045374.19	ENSMUST00000173320.8	6908	10	21	5	21	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGTGAGGCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	75345522	75331774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75341619
ENSMUSG00000045374.19_2	chr11	-	3120	10	FSM	ENSMUSG00000045374.19	ENST00000419248.5	3140	10	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCCACGGAGCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	75345589	75331785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75332916_75335080_75335261_75335523_75335670_75336229_75336920_75338689_75338856_75338948_75339115_75339850_75340042_75340171_75340363_75340621_75340730_75345437
ENSMUSG00000045382.7_0	chr1	-	1795	2	FSM	ENSMUSG00000045382.7	ENSMUST00000052172.7	1805	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACTTAACTTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	128520027	128515945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_128517639_128519925
ENSMUSG00000045404.17_0	chr12	+	3033	3	FSM	ENSMUSG00000045404.17	ENSMUST00000160413.8	3061	3	20	8	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACGAGGCCATGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	99930777	100028933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_99931061_99931462_99932540_100027260
ENSMUSG00000045404.17_1	chr12	+	3070	3	FSM	ENSMUSG00000045404.17	ENSMUST00000049788.9	3078	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTACGAGGCCATGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	99930791	100028933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_99931112_99931462_99932540_100027260
ENSMUSG00000045409.17_0	chr17	-	3186	7	FSM	ENSMUSG00000045409.17	ENSMUST00000113706.10	3204	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGATCTCTTGAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	36582447	36569770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36571814_36572382_36572499_36573001_36573025_36574620_36574852_36578016_36578113_36579500_36579959_36582228
ENSMUSG00000045410.19_0	chr13	-	3458	10	FSM	ENSMUSG00000045410.19	ENSMUST00000091848.7	3463	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGACTGTCTATACTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	4659168	4640748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4645658_4645732_4647483_4647582_4648768_4648892_4651216_4651295_4652679_4652797_4657389_4657558_4659083
ENSMUSG00000045410.19_2	chr13	-	579	6	FSM	ENSMUSG00000045410.19	ENST00000334019.4	598	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATTGAAAACAGCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	4652787	4643262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_4643298_4643560_4643644_4645069_4645154_4648768_4648892_4651216_4651353_4652669
ENSMUSG00000045411.17_0	chr7	+	1973	6	FSM	ENSMUSG00000045411.17	ENSMUST00000055858.14	1982	6	8	1	-5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGCTGTTTGATTCG	NA	NA	NA	NA	NA	NA	NA	NA	43896153	43901742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43896248_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_1	chr7	+	2130	7	FSM	ENSMUSG00000045411.17	ENSMUST00000188111.7	2131	7	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTGTGCTGTTTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	43896159	43901741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43896233_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_3	chr7	+	2092	7	FSM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43896210	43901739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43896248_43896661_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_5	chr7	+	2875	5	FSM	ENSMUSG00000045411.17	ENSMUST00000107950.9	3336	5	461	0	-192	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43896673	43901736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_6	chr7	+	2907	6	FSM	ENSMUSG00000045411.17	ENSMUST00000107948.8	2908	6	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43896214	43901736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43896248_43896674_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_7	chr7	+	2048	6	ISM	ENSMUSG00000045411.17	ENSMUST00000084937.11	2092	7	458	0	-197	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43896668	43901739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_43896841_43897675_43897720_43898965_43899024_43899444_43899484_43899732_43899765_43900036
ENSMUSG00000045411.17_8	chr7	+	2292	1	FSM	ENSMUSG00000080683.3	ENSMUST00000117033.3	93	1	-426	-1773	-426	1773	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTGTGCTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	43899447	43901739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43899400_43901700
ENSMUSG00000045414.8_0	chr9	-	3937	3	FSM	ENSMUSG00000045414.8	ENSMUST00000113028.2	3950	3	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAACCATACTTTGGCTAC	NA	NA	NA	NA	NA	NA	NA	NA	94420131	94399926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_94402700_94406444_94406749_94419271
ENSMUSG00000045414.8_1	chr9	-	1623	3	FSM	ENSMUSG00000045414.8	ENST00000495414.5	1650	3	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATATGCTACAAAACGTC	NA	NA	NA	NA	NA	NA	NA	NA	94419231	94401650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_94402700_94406444_94406749_94418961
ENSMUSG00000045427.14_0	chrX	+	2408	3	FSM	ENSMUSG00000045427.14	ENSMUST00000074950.11	2426	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGGAAAAATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	133501937	133507795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133502083_133503440_133503512_133505603
ENSMUSG00000045427.14_14	chrX	+	2297	3	ISM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	1417	8	1417	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGGAAAAATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	133503451	133507795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_133503512_133503666_133503712_133505603
ENSMUSG00000045427.14_7	chrX	+	2291	2	FSM	ENSMUSG00000045427.14	ENSMUST00000113203.2	2315	2	10	14	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGGAAAAATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	133501983	133507795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133502083_133505603
ENSMUSG00000045427.14_8	chrX	+	2356	4	FSM	ENSMUSG00000045427.14	ENSMUST00000059297.6	2364	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGGAAAAATCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	133502034	133507795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133502083_133503440_133503512_133503666_133503712_133505603
ENSMUSG00000045435.10_0	chr5	+	1131	2	FSM	ENSMUSG00000045435.10	ENSMUST00000115259.3	1147	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCATTTTTCCACATGCC	NA	NA	NA	NA	NA	NA	NA	NA	21087198	21091862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21087654_21091186
ENSMUSG00000045438.13_0	chr5	-	2446	3	FSM	ENSMUSG00000045438.13	ENSMUST00000049630.13	2461	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAACTCACTGCGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	139330980	139321950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139324131_139328317_139328430_139330826
ENSMUSG00000045441.6_0	chr6	-	8319	2	FSM	ENSMUSG00000045441.6	ENSMUST00000051065.6	8339	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTATTAACTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59403270	59324221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_59332415_59403144
ENSMUSG00000045464.6_0	chr2	+	2027	2	FSM	ENSMUSG00000045464.6	ENSMUST00000152313.2	2040	2	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATCTAAAACTCAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	94236497	94242016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_94237312_94240803
ENSMUSG00000045466.19_0	chr6	+	2750	5	FSM	ENSMUSG00000045466.19	ENSMUST00000101445.11	2761	5	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGTCCCTGTCTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	47930330	47942230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47930517_47932750_47933105_47934409_47934537_47939458_47939567_47940255
ENSMUSG00000045467.14_0	chr7	+	2446	14	FSM	ENSMUSG00000045467.14	ENST00000438251.3	2461	14	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATCATCCAACACAGGTA	NA	NA	NA	NA	NA	NA	NA	NA	79897038	79910059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79897300_79898042_79898084_79899867_79899987_79902248_79902380_79902788_79902946_79903326_79903471_79903829_79903916_79904218_79904451_79905059_79905245_79906592_79906779_79907924_79908106_79908390_79908571_79909137_79909442_79909820
ENSMUSG00000045482.17_0	chr5	+	12470	71	FSM	ENSMUSG00000045482.17	ENSMUST00000100467.10	12479	71	0	9	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTATTTGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	144705603	144796579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_144705658_144707898_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728083_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ENSMUSG00000045482.17_3	chr5	+	12417	70	ISM	ENSMUSG00000045482.17	ENSMUST00000100467.10	12479	71	2294	9	-1	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTATTTGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	144707897	144796579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728083_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ENSMUSG00000045482.17_4	chr5	+	12440	71	FSM	ENSMUSG00000045482.17	ENSMUST00000094120.9	12456	71	0	16	0	9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATTTTATAAAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	144707898	144796570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728083_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144746960_144747015_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776440_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782278_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ENSMUSG00000045482.17_7	chr5	+	12453	72	FSM	ENSMUSG00000045482.17	ENST00000456197.2	12469	72	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTATTTGCTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	144707939	144796579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_144708060_144708417_144708468_144713912_144714024_144714690_144714796_144716793_144716878_144718785_144718843_144719005_144719132_144720797_144720876_144721067_144721157_144722278_144722376_144723441_144723581_144724469_144724549_144726167_144726403_144727630_144727998_144728080_144728179_144728902_144729098_144729822_144730015_144730719_144730886_144731410_144731668_144733770_144733972_144735057_144735210_144737603_144737804_144739677_144739896_144739972_144740171_144740848_144741110_144741509_144741672_144741793_144741891_144742497_144742620_144742863_144743035_144744132_144744202_144746960_144747015_144747141_144747163_144748704_144748825_144750243_144750364_144751218_144751384_144751480_144751663_144752160_144752360_144752741_144752871_144753121_144753389_144754406_144754614_144754744_144754904_144755001_144755131_144756511_144756623_144757057_144757205_144758582_144758797_144759500_144759627_144761266_144761414_144762028_144762232_144762683_144762806_144763329_144763544_144765276_144765457_144767715_144767863_144769257_144769378_144769715_144770004_144770106_144770245_144770966_144771080_144772797_144772934_144773941_144774134_144776210_144776407_144777147_144777414_144777782_144777884_144779346_144779549_144780013_144780179_144781008_144781100_144782224_144782425_144783177_144783440_144786669_144786896_144787929_144788148_144790249_144790435_144793696_144793901_144794194_144794390_144795483
ENSMUSG00000045503.17_0	chr2	+	1997	6	FSM	ENSMUSG00000045503.17	ENSMUST00000109352.8	2001	6	0	4	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGGCTTGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	164298895	164307428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164298950_164299888_164300018_164302682_164303041_164303212_164303450_164305220_164305289_164306277
ENSMUSG00000045503.17_2	chr2	+	1935	5	ISM	ENSMUSG00000045503.17	ENSMUST00000109352.8	2001	6	1001	4	1001	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGGCTTGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	164299896	164307428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_164300018_164302682_164303041_164303212_164303450_164305220_164305289_164306277
ENSMUSG00000045503.17_3	chr2	+	1597	4	FSM	ENSMUSG00000045503.17	ENSMUST00000072452.11	1606	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTTTGGCTTGTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	164302899	164307428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164306277
ENSMUSG00000045519.16_1	chr9	-	784	2	FSM	ENSMUSG00000045519.16	ENST00000306908.10	802	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAAGCCCTATGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	20263249	20258860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20259529_20263133
ENSMUSG00000045519.16_7	chr9	-	596	3	FSM	ENSMUSG00000045519.16	ENSMUST00000143992.3	608	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCTTCTTGTCATATA	NA	NA	NA	NA	NA	NA	NA	NA	20296463	20263878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20264138_20265359_20265546_20296312
ENSMUSG00000045538.7_0	chr8	-	2245	1	FSM	ENSMUSG00000045538.7	ENSMUST00000058579.7	2262	1	11	6	11	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTACACTATGTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	106738503	106736258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106736300_106738500
ENSMUSG00000045539.4_0	chr3	-	1163	1	ISM	ENSMUSG00000045539.4	ENSMUST00000058142.4	1222	2	1048	8	1048	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCACCCTTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	92364979	92363816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_92363800_92365000
ENSMUSG00000045539.4_1	chr3	-	1214	2	FSM	ENSMUSG00000045539.4	ENSMUST00000058142.4	1222	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCACCCTTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	92366027	92363816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92364997_92365993
ENSMUSG00000045545.9_0	chr11	-	1686	8	FSM	ENSMUSG00000045545.9	ENSMUST00000007272.8	1698	8	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATCACTGCCTCCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100098366	100093991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100094236_100094781_100094847_100094933_100095155_100095249_100095376_100095458_100095621_100095773_100095931_100096446_100096530_100097738
ENSMUSG00000045545.9_1	chr11	-	670	5	FSM	ENSMUSG00000045545.9	ENST00000398469.5	674	5	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTGCCTGGCCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100096478	100094934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773_100095871_100096413
ENSMUSG00000045545.9_2	chr11	-	600	4	ISM	ENSMUSG00000045545.9	ENST00000398469.5	674	5	615	2	615	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGTGCCTGGCCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100095865	100094934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_100095155_100095249_100095376_100095458_100095621_100095773
ENSMUSG00000045555.4_0	chr10	+	1508	5	FSM	ENSMUSG00000045555.4	ENSMUST00000058747.4	1529	5	16	5	16	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCATACTTTTTACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	40559293	40687074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_40559661_40605982_40606082_40613670_40613811_40622327_40622557_40686401
ENSMUSG00000045573.10_0	chr4	-	1442	2	FSM	ENSMUSG00000045573.10	ENSMUST00000070375.8	1449	2	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGATATTGTAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	4138476	4133536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_4134508_4138005
ENSMUSG00000045576.17_0	chr3	+	2426	14	FSM	ENSMUSG00000045576.17	ENSMUST00000106769.8	2428	14	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTAGTGTATTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	104771820	104834176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826762_104826818_104829502_104829596_104833745
ENSMUSG00000045576.17_1	chr3	+	5700	14	FSM	ENSMUSG00000045576.17	ENSMUST00000059271.13	5728	14	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTGATGAAATGTATT	NA	NA	NA	NA	NA	NA	NA	NA	104771832	104837366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104772625_104775339_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ENSMUSG00000045576.17_2	chr3	+	1656	14	FSM	ENSMUSG00000045576.17	ENST00000490067.5	1669	14	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATGATCTCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	104772344	104833885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104772625_104775390_104775423_104778161_104778328_104780837_104780893_104782142_104782259_104790108_104790188_104796601_104796757_104798779_104798878_104799512_104799628_104801682_104801756_104803011_104803115_104826666_104826818_104829502_104829596_104833745
ENSMUSG00000045594.11_0	chr9	+	2381	16	FSM	ENSMUSG00000045594.11	ENSMUST00000063042.11	2396	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTGGGGGTCCTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	114230154	114303441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114230338_114246028_114246199_114249420_114249572_114250756_114250818_114253012_114253108_114259380_114259562_114263468_114263528_114266806_114266929_114267008_114267050_114272076_114272190_114279664_114279740_114283255_114283346_114285498_114285616_114288661_114288794_114293111_114293367_114302905
ENSMUSG00000045598.11_0	chr7	+	3322	2	FSM	ENSMUSG00000045598.11	ENSMUST00000106312.4	3342	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATAAAAGACATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	126832242	126837341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126832659_126834435
ENSMUSG00000045598.11_1	chr7	+	3020	2	FSM	ENSMUSG00000045598.11	ENSMUST00000056232.7	3043	2	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTTGTGTGTGGTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	126832446	126837212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126832690_126834435
ENSMUSG00000045624.16_0	chr2	-	3383	14	FSM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAATTACCCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	140012479	139961810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691_140010376_140012396
ENSMUSG00000045624.16_3	chr2	-	3300	13	ISM	ENSMUSG00000045624.16	ENSMUST00000046030.8	3396	14	2109	8	2109	-8	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAAATTACCCGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	140010375	139961810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_139962826_139965450_139965598_139966847_139966925_139971119_139971208_139980852_139980975_139990672_139990835_139996713_139996862_139998974_139999090_140000399_140000553_140001613_140001715_140002302_140002417_140006128_140006503_140009691
ENSMUSG00000045636.17_3	chr8	-	1193	9	FSM	ENSMUSG00000045636.17	ENST00000634613.1	1208	9	8	7	8	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGACGGCTTCTGAACG	NA	NA	NA	NA	NA	NA	NA	NA	41469780	41446463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_41446671_41447584_41447683_41451383_41451501_41452472_41452569_41452679_41452754_41453797_41453904_41455341_41455557_41468424_41468492_41469567
ENSMUSG00000045639.15_0	chr7	-	6104	3	FSM	ENSMUSG00000045639.15	ENSMUST00000058038.12	6120	3	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTGTTTTTACTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	127213592	127206205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127211735_127211838_127211946_127213124
ENSMUSG00000045639.15_1	chr7	-	5836	4	FSM	ENSMUSG00000045639.15	ENSMUST00000122066.8	5850	4	13	1	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTTTTTACTTCTTATC	NA	NA	NA	NA	NA	NA	NA	NA	127214374	127206203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127211735_127211838_127211946_127212175_127212254_127214254
ENSMUSG00000045639.15_2	chr7	-	5803	3	FSM	ENSMUSG00000045639.15	ENSMUST00000084564.10	5829	3	18	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCTAGTTGTTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	127214426	127206210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127211735_127211838_127211946_127214254
ENSMUSG00000045659.19_0	chr7	-	371	3	ISM	ENSMUSG00000045659.19	ENST00000532079.1	465	4	196	0	196	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGAGGCCAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	115907383	115734257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_115734475_115735152_115735248_115907324
ENSMUSG00000045659.19_1	chr7	-	459	4	FSM	ENSMUSG00000045659.19	ENST00000532079.1	465	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGACAGAGGCCAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	115907573	115734257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115734475_115735152_115735248_115907324_115907384_115907485
ENSMUSG00000045664.6_0	chr19	-	3410	2	FSM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTTTATGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	5974844	5965664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5969022_5974791
ENSMUSG00000045664.6_1	chr19	-	3349	1	ISM	ENSMUSG00000045664.6	ENSMUST00000055458.6	3411	2	5831	1	5831	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCTTTTATGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	5969013	5965664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5965700_5969000
ENSMUSG00000045665.6_0	chr15	+	1740	2	FSM	ENSMUSG00000045665.6	ENSMUST00000051341.6	1754	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCACTTGTCCTCTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102187897	102190184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102188065_102188611
ENSMUSG00000045671.18_0	chr11	+	4443	7	FSM	ENSMUSG00000045671.18	ENSMUST00000093299.13	4449	7	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGACTATTGGCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	19874374	19974020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_19874957_19948119_19948298_19951008_19951090_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ENSMUSG00000045671.18_1	chr11	+	2791	6	FSM	ENSMUSG00000045671.18	ENSMUST00000093298.12	2852	6	56	5	56	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATGTAAAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	19874497	19972572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_19874957_19948119_19948298_19955781_19955951_19958412_19958478_19968051_19968190_19970790
ENSMUSG00000045672.16_0	chr4	+	7578	61	FSM	ENSMUSG00000045672.16	ENSMUST00000036300.13	7612	61	23	11	23	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGGAAAGACGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	63133694	63253217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63134119_63139252_63139324_63142440_63144177_63150028_63150083_63153566_63153621_63162231_63162286_63163305_63163360_63171880_63171926_63172525_63172580_63172933_63172979_63175296_63175351_63176388_63176434_63181955_63182010_63183871_63183917_63190757_63190812_63191303_63191349_63194164_63194219_63195349_63195404_63196024_63196079_63199297_63199352_63199480_63199535_63200885_63200931_63202145_63202200_63204842_63204888_63209759_63209814_63211437_63211492_63211706_63211761_63216047_63216102_63218917_63218972_63219396_63219442_63219529_63219575_63219794_63219849_63220604_63220659_63221270_63221325_63223421_63223476_63224922_63224977_63227758_63227867_63231662_63231717_63231870_63231979_63232909_63232964_63233798_63233853_63235564_63235622_63235723_63235778_63236220_63236275_63236498_63236553_63237157_63237212_63237286_63237395_63237686_63237795_63239666_63239775_63241684_63241739_63242155_63242219_63242667_63242722_63242867_63242904_63243008_63243027_63243412_63243449_63244360_63244388_63246066_63246133_63246771_63246941_63248034_63248145_63249518_63249738_63251398
ENSMUSG00000045678.9_0	chr19	+	11126	3	FSM	ENSMUSG00000045678.9	ENSMUST00000217182.3	11140	3	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGAATGAAGTATCCA	NA	NA	NA	NA	NA	NA	NA	NA	13608989	13621342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_13609128_13609507_13609601_13610447
ENSMUSG00000045679.15_0	chr12	-	1916	7	FSM	ENSMUSG00000045679.15	ENSMUST00000054536.11	1928	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTAAGCTGTCATGAA	NA	NA	NA	NA	NA	NA	NA	NA	17050109	17038650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_17039897_17042278_17042321_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUSG00000045679.15_3	chr12	-	1679	6	FSM	ENSMUSG00000045679.15	ENSMUST00000222203.2	1706	6	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAAATGTTTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	17050050	17038707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_17039897_17042278_17042321_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUSG00000045679.15_4	chr12	-	577	6	FSM	ENSMUSG00000045679.15	ENST00000441908.6	595	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGGACTTCAAACGACT	NA	NA	NA	NA	NA	NA	NA	NA	17049946	17039784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_17039897_17043453_17043575_17045614_17045673_17047634_17047705_17047774_17047858_17049813
ENSMUSG00000045690.9_0	chr12	-	2970	2	FSM	ENSMUSG00000045690.9	ENSMUST00000062370.9	2979	2	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAAGTTTGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	75716308	75677375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_75680283_75716245
ENSMUSG00000045690.9_1	chr12	-	2902	1	FSM	ENSMUSG00000118552.2	ENSMUST00000238938.2	348	1	-2185	-369	-2185	369	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTAAGTTTGGGTATCT	NA	NA	NA	NA	NA	NA	NA	NA	75680277	75677375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_75677400_75680300
ENSMUSG00000045691.15_0	chr14	+	2821	2	FSM	ENSMUSG00000045691.15	ENSMUST00000050575.9	2830	2	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGTGGGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55332244	55336438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55333464_55334836
ENSMUSG00000045730.5_0	chr18	-	2122	1	FSM	ENSMUSG00000045730.5	ENSMUST00000053640.5	2144	1	14	8	14	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	732	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATGACTTCATTGCACC	NA	NA	NA	NA	NA	NA	NA	NA	62313016	62310894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_62310900_62313000
ENSMUSG00000045744.12_0	chr17	+	847	6	FSM	ENSMUSG00000045744.12	ENSMUST00000238986.2	849	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGGTAATTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24692876	24694443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24692962_24693092_24693213_24693378_24693535_24693612_24693715_24693963_24694118_24694213
ENSMUSG00000045744.12_1	chr17	+	758	5	FSM	ENSMUSG00000045744.12	ENSMUST00000054946.10	997	5	239	0	156	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGGTAATTTCTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	24693096	24694443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24693213_24693378_24693535_24693612_24693715_24693963_24694118_24694213
ENSMUSG00000045751.17_0	chr4	+	4443	24	FSM	ENSMUSG00000045751.17	ENSMUST00000108222.9	4478	24	27	8	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24496477	24602942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24529043_24529164_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ENSMUSG00000045751.17_2	chr4	+	1333	5	FSM	ENSMUSG00000045751.17	ENSMUST00000138567.9	1350	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTTCTGTCATTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	24496474	24503409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931
ENSMUSG00000045751.17_3	chr4	+	4236	23	FSM	ENSMUSG00000045751.17	ENSMUST00000050446.13	4261	23	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACAGCTCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	24496564	24602942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_24497066_24497837_24497964_24500036_24500087_24502747_24502836_24502931_24503113_24505344_24505436_24507313_24507445_24508404_24508519_24517059_24517237_24521240_24521304_24532902_24533130_24535938_24536449_24574380_24574575_24578752_24578904_24580053_24580203_24581101_24581245_24586182_24586343_24588202_24588373_24591033_24591246_24596137_24596302_24598785_24598883_24600154_24600323_24602573
ENSMUSG00000045752.14_0	chr7	+	1503	3	FSM	ENSMUSG00000045752.14	ENSMUST00000060433.10	1519	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGCTTTTTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	142622999	142624828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142623251_142623491_142623588_142623672
ENSMUSG00000045752.14_1	chr7	+	1346	3	FSM	ENSMUSG00000045752.14	ENSMUST00000177841.8	1364	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTCTTGAATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	142623115	142624817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142623251_142623491_142623558_142623672
ENSMUSG00000045757.7_0	chr7	-	2474	3	FSM	ENSMUSG00000045757.7	ENSMUST00000059199.7	2508	3	18	16	18	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACAAAAACCCCACAA	NA	NA	NA	NA	NA	NA	NA	NA	127005976	127002855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127004832_127005337_127005452_127005592
ENSMUSG00000045761.17_0	chr17	+	3439	20	FSM	ENSMUSG00000045761.17	ENST00000379558.5	3451	20	10	2	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTCTTCTCTTACAC	NA	NA	NA	NA	NA	NA	NA	NA	71980376	72036664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71980495_71992048_71992188_71994580_71994695_71996143_71996432_71997520_71997733_71998440_71998632_72002691_72002739_72004827_72004992_72007499_72007651_72007874_72008040_72011682_72011837_72012773_72012880_72014073_72014310_72016503_72016663_72021230_72021349_72021672_72021768_72023316_72023513_72024244_72024462_72031966_72032054_72036182
ENSMUSG00000045763.9_0	chr15	-	1834	2	FSM	ENSMUSG00000045763.9	ENSMUST00000058845.9	1855	2	5	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAATTAAAAAGTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	25413845	25363378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_25365005_25413637
ENSMUSG00000045767.10_0	chr13	+	4634	2	FSM	ENSMUSG00000045767.10	ENSMUST00000057844.10	4652	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCAGCTCTGTACTACT	NA	NA	NA	NA	NA	NA	NA	NA	55840947	55851306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55841161_55846885
ENSMUSG00000045775.16_1	chr11	+	1140	3	FSM	ENSMUSG00000045775.16	ENST00000329783.9	1158	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTGGTGAGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	115353442	115360966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115353634_115355739_115355884_115360161
ENSMUSG00000045776.4_0	chr14	+	7313	3	FSM	ENSMUSG00000045776.4	ENSMUST00000055662.4	7321	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATGTATTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	28740172	28755602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_28740567_28743576_28744174_28749280
ENSMUSG00000045777.15_0	chr7	-	1133	3	FSM	ENSMUSG00000045777.15	ENSMUST00000084412.6	1158	3	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCAGCTTCAGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	141925977	141909250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141909852_141924594_141925048_141925898
ENSMUSG00000045780.4_0	chr7	-	5716	1	FSM	ENSMUSG00000045780.4	ENSMUST00000062144.4	5731	1	15	0	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCCTTAATAAATGCAC	NA	NA	NA	NA	NA	NA	NA	NA	103320383	103314667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103314700_103320400
ENSMUSG00000045790.11_0	chr5	-	1912	11	FSM	ENSMUSG00000045790.11	ENST00000389609.8	1932	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCTAGGAAAGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52596568	52533204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_52534021_52542446_52542564_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400
ENSMUSG00000045790.11_2	chr5	-	2159	13	FSM	ENSMUSG00000045790.11	ENST00000635206.2	2177	13	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGCTAGGAAAGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	52628912	52533204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_52534021_52542446_52542564_52548430_52548464_52550012_52550090_52557426_52557572_52560048_52560134_52561458_52561522_52562373_52562551_52563317_52563435_52578073_52578182_52593039_52593079_52596400_52596563_52628692
ENSMUSG00000045795.11_0	chr7	+	1543	8	FSM	ENSMUSG00000045795.11	ENST00000611636.4	1558	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAACGCCAGAAAACCCT	NA	NA	NA	NA	NA	NA	NA	NA	81221084	81241805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_81221658_81224293_81224451_81227898_81228050_81234849_81235020_81235881_81236048_81239085_81239274_81241509_81241597_81241754
ENSMUSG00000045817.9_0	chr17	-	3517	2	FSM	ENSMUSG00000045817.9	ENSMUST00000060366.7	3530	2	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTCTTTGAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	84495362	84491358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_84494585_84495071
ENSMUSG00000045822.5_0	chr2	+	2690	2	FSM	ENSMUSG00000045822.5	ENSMUST00000052107.5	2708	2	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGTGTTTTTTGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	164647034	164664049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164647352_164661676
ENSMUSG00000045827.11_0	chr13	+	3458	8	FSM	ENSMUSG00000045827.11	ENSMUST00000063191.14	3472	8	7	7	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAACATGCCTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33187239	33201933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33187328_33188545_33188679_33190515_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
ENSMUSG00000045827.11_3	chr13	+	3384	7	FSM	ENSMUSG00000045827.11	ENSMUST00000006391.5	3397	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAACATGCCTTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	33188531	33201933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33188679_33190515_33190694_33191988_33192127_33192750_33192869_33194669_33194813_33197844_33198001_33199429
ENSMUSG00000045838.9_0	chr2	-	4701	11	FSM	ENSMUSG00000045838.9	ENSMUST00000059997.9	4703	11	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGGTCTTTATCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	118593141	118584639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118588238_118588319_118588360_118588893_118588985_118589070_118589125_118589681_118589738_118589988_118590189_118590801_118590931_118591006_118591163_118591769_118591878_118592125_118592240_118592986
ENSMUSG00000045854.5_0	chr4	+	454	3	FSM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAGAGGTTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	32800256	32801376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32800336_32800609_32800751_32801142
ENSMUSG00000045854.5_1	chr4	+	380	2	ISM	ENSMUSG00000045854.5	ENSMUST00000062802.5	465	3	352	7	352	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAGAGGTTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	32800604	32801376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_32800751_32801142
ENSMUSG00000045867.11_0	chr10	-	1599	2	FSM	ENSMUSG00000045867.11	ENSMUST00000220279.2	1613	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAAATAAAGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95158818	95010612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95011841_95158447
ENSMUSG00000045867.11_1	chr10	-	1640	3	FSM	ENSMUSG00000045867.11	ENSMUST00000053594.7	1661	3	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCAAATAAAGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	95159954	95010612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95011841_95158447_95158752_95159846
ENSMUSG00000045886.8_0	chr10	+	531	1	FSM	ENSMUSG00000045886.8	ENSMUST00000057649.8	563	1	3	29	3	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43400082	43400613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43400100_43400600
ENSMUSG00000045886.8_1	chr10	+	416	2	FSM	ENSMUSG00000045886.8	ENSMUST00000216543.2	456	2	12	28	12	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	43400113	43400613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43400172_43400255
ENSMUSG00000045896.15_0	chr6	-	3961	5	FSM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATACTACCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83808710	83782390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252_83808311_83808616
ENSMUSG00000045896.15_1	chr6	-	3869	4	ISM	ENSMUSG00000045896.15	ENSMUST00000058383.9	3982	5	411	8	411	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATACTACCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	83808312	83782390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_83785875_83786880_83787058_83791703_83791852_83808252
ENSMUSG00000045917.18_0	chr4	+	3743	10	FSM	ENSMUSG00000045917.18	ENSMUST00000077709.11	3765	10	13	9	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAAGCTTAGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	63477030	63504585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63477195_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUSG00000045917.18_3	chr4	+	3625	10	FSM	ENSMUSG00000045917.18	ENSMUST00000080336.4	3630	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAAGCTTAGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	63478596	63504585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_63478643_63479148_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUSG00000045917.18_5	chr4	+	3579	9	ISM	ENSMUSG00000045917.18	ENSMUST00000080336.4	3630	10	552	5	552	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAAGCTTAGTAAGG	NA	NA	NA	NA	NA	NA	NA	NA	63479148	63504585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_63479233_63480676_63480869_63483893_63484004_63486697_63486806_63488180_63488331_63496037_63496149_63498169_63498251_63498529_63498710_63502022
ENSMUSG00000045932.13_0	chr19	+	3798	3	FSM	ENSMUSG00000045932.13	ENSMUST00000102826.4	3818	3	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAGTAACACATAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	34528124	34553814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34528423_34547618_34547771_34550466
ENSMUSG00000045934.16_0	chr3	+	2766	17	FSM	ENSMUSG00000045934.16	ENSMUST00000054356.16	2778	17	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGCTGGTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96069327	96079029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96069576_96069945_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUSG00000045934.16_6	chr3	+	2617	17	FSM	ENSMUSG00000045934.16	ENST00000439741.4	2630	17	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATTGCTGGTATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	96069461	96079029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96069576_96069960_96070037_96070408_96070531_96070784_96070846_96070984_96071128_96071564_96071644_96071749_96071886_96072102_96072191_96072313_96072403_96072487_96072613_96075127_96075195_96075388_96075460_96075914_96076082_96076351_96076526_96077122_96077306_96077668_96077963_96078401
ENSMUSG00000045948.9_0	chr7	-	663	2	FSM	ENSMUSG00000045948.9	ENSMUST00000171183.2	883	2	214	6	214	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACTCAGTGTGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28440981	28439071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28439665_28440911
ENSMUSG00000045948.9_1	chr7	-	717	3	FSM	ENSMUSG00000045948.9	ENSMUST00000056078.9	722	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTACTCAGTGTGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	28441245	28439071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28439665_28440911_28440980_28441189
ENSMUSG00000045954.8_0	chr1	+	3035	2	FSM	ENSMUSG00000045954.8	ENSMUST00000051572.8	3055	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1011	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTCAGTTTGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	51328294	51342109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_51329028_51339807
ENSMUSG00000045962.17_0	chr6	-	10559	28	FSM	ENSMUSG00000045962.17	ENSMUST00000060043.13	10575	28	14	2	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120015619	119900931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119930731_119931194_119933031_119933158_119937604_119937686_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ENSMUSG00000045962.17_7	chr6	-	11300	28	FSM	ENSMUSG00000045962.17	ENSMUST00000177761.8	11303	28	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120015613	119900931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119933031_119933158_119937604_119937686_119939357_119940594_119942625_119942884_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ENSMUSG00000045962.17_9	chr6	-	11327	28	FSM	ENSMUSG00000045962.17	ENSMUST00000088644.13	11330	28	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGGGTTGTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	120015613	119900931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_119903649_119904007_119904196_119911216_119911412_119913329_119913533_119914317_119914980_119916598_119916664_119920766_119920828_119921661_119921746_119923197_119923282_119924935_119926381_119926968_119927092_119927203_119927262_119927459_119927634_119927975_119928093_119928595_119928759_119928858_119928957_119929645_119929931_119933031_119933158_119937604_119937686_119939357_119940594_119945436_119945625_119946197_119946532_119947818_119948039_119949728_119949818_119967052_119967211_119969300_119969522_119979153_119979327_120013834
ENSMUSG00000045969.9_3	chr8	+	1015	2	FSM	ENSMUSG00000045969.9	ENST00000375775.3	1031	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGTTCGAATTAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	11606268	11612330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11606371_11611417
ENSMUSG00000045969.9_4	chr8	+	1956	2	FSM	ENSMUSG00000045969.9	ENSMUST00000209565.2	1971	2	9	6	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACCATCCATGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	11608437	11613244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_11608567_11611417
ENSMUSG00000045969.9_5	chr8	+	921	1	NIC	ENSMUSG00000045969.9	novel	2241	2	NA	NA	2988	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGAATTAACCATGTCAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	11611416	11612337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_11611400_11612300
ENSMUSG00000045973.19_0	chr4	-	4419	3	FSM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	1	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAAACACAAAGCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	45408760	45395935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45400180_45404726_45404836_45408694
ENSMUSG00000045973.19_1	chr4	-	4350	2	ISM	ENSMUSG00000045973.19	ENSMUST00000107796.8	4433	3	3929	13	3928	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAAACACAAAGCTTCGG	NA	NA	NA	NA	NA	NA	NA	NA	45404832	45395935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_45400180_45404726
ENSMUSG00000045975.9_0	chr16	-	6541	14	FSM	ENSMUSG00000045975.9	ENSMUST00000170757.3	6556	14	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCGAGTTGGTTCCGAGT	NA	NA	NA	NA	NA	NA	NA	NA	97723825	97656415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_97660777_97669791_97670117_97671352_97671481_97676328_97676443_97677419_97677595_97678307_97678433_97680809_97680875_97682788_97682895_97684472_97684597_97687287_97687411_97691213_97691319_97693389_97693510_97713805_97713905_97723254
ENSMUSG00000045980.14_0	chr11	+	4551	10	FSM	ENSMUSG00000045980.14	ENSMUST00000061450.7	4564	10	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGGTTGTCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	115078321	115137845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115078425_115079035_115079149_115088061_115088184_115091645_115091728_115092141_115092239_115092957_115093039_115095887_115095988_115096300_115096410_115119246_115119341_115134195
ENSMUSG00000045983.17_10	chr16	+	5197	30	FSM	ENSMUSG00000045983.17	ENST00000392537.6	5215	30	9	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATTAAGTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20491505	20511622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20491627_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_122	chr16	+	5493	32	FSM	ENSMUSG00000045983.17	ENSMUST00000115461.8	5507	32	3	11	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATTAAGTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20492172	20511622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500483_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_137	chr16	+	5311	32	ISM	ENSMUSG00000045983.17	ENST00000346169.7	5394	33	794	11	85	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATTAAGTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20492351	20511622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_42	chr16	+	5019	33	FSM	ENSMUSG00000045983.17	ENST00000435046.7	5032	33	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCGATGTGTCTTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	20491529	20511296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494205_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_6	chr16	+	5361	32	FSM	ENSMUSG00000045983.17	ENSMUST00000115463.8	5378	32	6	11	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATTAAGTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20491501	20511622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20491627_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503178_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045983.17_73	chr16	+	5381	33	FSM	ENSMUSG00000045983.17	ENST00000346169.7	5394	33	2	11	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCAATTAAGTTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	20491559	20511622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20491627_20492348_20492406_20492617_20492712_20492977_20493065_20494093_20494271_20494479_20494580_20496435_20496549_20497331_20497425_20497633_20497701_20497962_20498776_20499462_20499552_20499639_20499827_20499932_20500067_20500169_20500329_20500486_20500673_20500791_20500990_20501408_20501556_20502167_20502405_20502561_20502667_20502771_20502932_20503157_20503259_20504260_20504364_20504608_20504706_20504900_20505128_20505262_20505382_20505509_20505683_20505899_20506026_20506130_20506213_20507288_20507388_20507480_20507616_20507720_20507803_20507941_20508083_20510996
ENSMUSG00000045996.13_0	chr15	+	486	4	FSM	ENSMUSG00000045996.13	ENSMUST00000180159.8	489	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCTATTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	36174158	36177153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_36174228_36175132_36175203_36175529_36175623_36176899
ENSMUSG00000045996.13_3	chr15	+	587	4	FSM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCTATTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	36174189	36177153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_36174360_36175132_36175203_36175529_36175623_36176899
ENSMUSG00000045996.13_4	chr15	+	405	3	ISM	ENSMUSG00000045996.13	ENSMUST00000057177.7	601	4	966	3	966	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCATTTCTATTCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	36175144	36177153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_36175203_36175529_36175623_36176899
ENSMUSG00000046000.6_0	chr5	-	3383	2	FSM	ENSMUSG00000046000.6	ENSMUST00000060265.6	3424	2	36	5	36	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCATGAAGTGAGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	97540202	97530061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_97532729_97539486
ENSMUSG00000046010.8_0	chr11	+	1576	1	FSM	ENSMUSG00000046010.8	ENSMUST00000056677.8	1591	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCAGTGGATGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	82655177	82656753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82655200_82656800
ENSMUSG00000046020.14_0	chr2	+	5580	7	FSM	ENSMUSG00000046020.14	ENSMUST00000049863.12	5600	7	20	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCATGCCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	153083472	153112167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153083646_153085557_153085680_153090368_153090552_153091600_153091714_153101519_153101713_153103117_153103361_153107614
ENSMUSG00000046027.18_0	chr7	+	2464	6	FSM	ENSMUSG00000046027.18	ENSMUST00000075418.15	2483	6	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGGTATCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	83281175	83291526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_83281348_83281943_83281994_83282337_83282471_83285958_83286077_83286811_83286906_83289629
ENSMUSG00000046032.17_0	chrX	-	1092	6	FSM	ENSMUSG00000046032.17	ENSMUST00000156473.8	1114	6	7	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATCAAGTACATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100266152	100141406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100141834_100145973_100146042_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046032.17_2	chrX	-	2399	4	FSM	ENSMUSG00000046032.17	ENSMUST00000120389.8	2415	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100266145	100255570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046032.17_3	chrX	-	984	5	FSM	ENSMUSG00000046032.17	ENSMUST00000077876.4	1002	5	12	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAAGCCTCCGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	100266157	100255570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_100255953_100257379_100257471_100258006_100258132_100259088_100259185_100265867
ENSMUSG00000046034.9_0	chr15	-	1480	7	FSM	ENSMUSG00000046034.9	ENSMUST00000059662.8	1491	7	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTAGTTTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	27630772	27606008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_27606548_27608677_27608948_27611597_27611724_27616409_27616554_27619614_27619710_27623367_27623445_27630543
ENSMUSG00000046056.16_0	chr7	+	712	4	FSM	ENSMUSG00000046056.16	ENSMUST00000182229.8	732	4	19	1	19	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGTGGCTCACTGTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30450914	30455558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30451341_30454233_30454306_30454426_30454472_30455389
ENSMUSG00000046056.16_3	chr7	+	2221	4	FSM	ENSMUSG00000046056.16	ENSMUST00000080518.14	2221	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTGGCTCACTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	30450957	30455556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30452895_30454233_30454306_30454426_30454472_30455389
ENSMUSG00000046062.6_0	chr1	+	5578	2	FSM	ENSMUSG00000046062.6	ENSMUST00000052529.4	5594	2	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATTAAATGCTATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	133058886	133067511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_133061354_133064400
ENSMUSG00000046079.17_0	chr5	+	3901	3	FSM	ENSMUSG00000046079.17	ENSMUST00000060531.16	3923	3	14	8	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGTAGTGGTTCACAAC	NA	NA	NA	NA	NA	NA	NA	NA	105847848	105963073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_105848121_105880095_105880241_105959589
ENSMUSG00000046079.17_1	chr5	+	3910	3	FSM	ENSMUSG00000046079.17	ENSMUST00000120847.8	3929	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAATCGTAGTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	105848666	105963069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_105848952_105880095_105880241_105959589
ENSMUSG00000046096.8_0	chr7	+	4809	3	FSM	ENSMUSG00000046096.8	ENSMUST00000060175.8	4831	3	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCTTCGTCGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	120276875	120334077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_120277094_120325342_120325556_120329699
ENSMUSG00000046101.17_0	chr1	+	3243	16	FSM	ENSMUSG00000046101.17	ENSMUST00000140948.9	3249	16	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCATTTGCTTCTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	9978894	10012304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_9978916_9981925_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602_10010759_10011135
ENSMUSG00000046101.17_3	chr1	+	3226	15	ISM	ENSMUSG00000046101.17	ENSMUST00000140948.9	3249	16	3029	4	385	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTGCTTCTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	9981923	10012306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_9982038_9982134_9982266_9982338_9982399_9985698_9985895_9986540_9986664_9986774_9986880_9989244_9989371_9990659_9990898_9994281_9994488_10001005_10001173_10002226_10002407_10004147_10004291_10007220_10007331_10010602_10010759_10011135
ENSMUSG00000046110.16_2	chr2	-	2965	3	Fusion	ENSMUSG00000046110.16_ENSMUSG00000080374.3	novel	2240	10	NA	NA	-2650	1384	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACGTGGAGTGCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	121283901	121279766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr2_-_121279923_121280455_121280563_121281199
ENSMUSG00000046111.18_0	chr9	-	7598	28	FSM	ENSMUSG00000046111.18	ENSMUST00000161132.9	7605	28	3	4	3	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGATTTGATTCCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	15269081	15228219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_15228410_15228754_15228890_15228969_15229064_15229214_15229353_15233795_15234380_15234864_15235007_15235444_15235588_15236802_15237043_15237370_15237474_15237936_15238044_15239091_15239248_15241800_15241945_15242049_15242207_15243231_15246602_15246866_15246965_15247144_15247280_15247611_15247716_15247848_15247942_15249490_15249716_15252169_15252278_15252736_15252921_15255419_15255561_15258236_15258333_15262106_15262201_15262986_15263112_15264194_15264396_15265901_15266033_15268921
ENSMUSG00000046138.16_0	chr19	-	6882	7	FSM	ENSMUSG00000046138.16	ENST00000381461.6	6890	7	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTGTTTGAATACCA	NA	NA	NA	NA	NA	NA	NA	NA	29783267	29692713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29697007_29697985_29698174_29700789_29700906_29720932_29721013_29730999_29732418_29763648_29763850_29782681
ENSMUSG00000046139.9_0	chr19	+	4201	19	FSM	ENSMUSG00000046139.9	ENSMUST00000061618.9	4216	19	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTCTAGATAGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	11889770	11922448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_11889942_11891711_11891824_11897541_11897760_11898168_11898250_11898732_11898928_11899830_11899933_11900750_11900841_11901164_11901383_11902500_11902591_11907238_11907420_11908896_11909021_11909501_11909600_11911043_11911104_11913042_11913192_11914583_11914744_11917047_11917204_11919992_11920085_11920188_11920339_11920694
ENSMUSG00000046152.17_0	chr8	+	3160	5	FSM	ENSMUSG00000046152.17	ENSMUST00000066173.12	3183	5	23	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATGTATTCTTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	31677381	31751511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046152.17_1	chr8	+	2938	4	FSM	ENSMUSG00000046152.17	ENSMUST00000161788.8	2962	4	17	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATTCCACTGTCGCA	NA	NA	NA	NA	NA	NA	NA	NA	31677376	31727815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31677491_31684981_31685318_31691237_31691533_31725622
ENSMUSG00000046152.17_2	chr8	+	3497	6	FSM	ENSMUSG00000046152.17	ENSMUST00000161502.2	3527	6	26	4	26	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAATGCTCAGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	31677400	31751762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31677491_31678329_31678435_31684981_31685318_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046152.17_3	chr8	+	1897	4	FSM	ENSMUSG00000046152.17	ENST00000524021.1	1909	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGACTTGAGCTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	31685018	31750434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_31685278_31691237_31691533_31725622_31726459_31749927
ENSMUSG00000046169.11_0	chr13	+	6441	24	FSM	ENSMUSG00000046169.11	ENSMUST00000224208.2	6480	24	26	13	26	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAAAATGAAAGTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	104431023	104633087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_104431333_104433669_104434035_104443728_104443898_104449222_104449435_104450143_104450228_104450745_104450892_104483855_104483900_104489265_104489372_104503301_104503449_104512149_104512292_104526585_104526694_104534369_104534516_104536450_104536515_104550215_104550319_104563442_104563577_104565342_104565467_104566297_104566379_104580560_104580725_104581322_104581462_104598735_104598866_104606852_104607058_104613160_104613338_104616026_104616184_104630102
ENSMUSG00000046179.18_0	chr7	-	3653	13	FSM	ENSMUSG00000046179.18	ENSMUST00000058745.15	3691	13	30	8	30	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTTAACATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	48530759	48516184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48530408
ENSMUSG00000046179.18_1	chr7	-	3489	13	FSM	ENSMUSG00000046179.18	ENSMUST00000119223.2	3499	13	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACTTAACATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	48531342	48516184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_48516978_48517401_48517788_48517906_48518040_48520438_48520965_48521560_48521649_48521833_48522035_48523007_48523146_48524719_48524882_48525204_48525520_48527689_48527847_48528172_48528452_48530025_48530150_48531155
ENSMUSG00000046180.12_0	chrX	+	1678	3	FSM	ENSMUSG00000046180.12	ENSMUST00000118305.8	1684	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTCCTCAGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57954719	57965658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_57954780_57956768_57956922_57964193
ENSMUSG00000046180.12_1	chrX	+	1566	2	FSM	ENSMUSG00000046180.12	ENSMUST00000062542.5	1572	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTTTCCTCAGCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	57956820	57965658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_57956922_57964193
ENSMUSG00000046180.12_2	chrX	+	1473	1	NIC	ENSMUSG00000046180.12	novel	1684	3	NA	NA	7371	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCAGCAGTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	57964191	57965664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_+_57964200_57965700
ENSMUSG00000046185.11_0	chr7	+	4110	5	FSM	ENSMUSG00000046185.11	ENSMUST00000032802.5	4113	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCAAAAAATTAGGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29467976	29479243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29468121_29470763_29470829_29474762_29474890_29475329_29475417_29475556
ENSMUSG00000046186.9_0	chr9	+	5836	33	FSM	ENSMUSG00000046186.9	ENSMUST00000093812.5	5860	33	7	17	7	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACAAATCAATCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	78522834	78623518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78523235_78524158_78524332_78541928_78541958_78543730_78543962_78549260_78549387_78561841_78561882_78564726_78564812_78567544_78567642_78568173_78568334_78568934_78569045_78571484_78571701_78572725_78572828_78572917_78572981_78574520_78574698_78576984_78577138_78579192_78579268_78579833_78579895_78587302_78587445_78588084_78588203_78592116_78592231_78596011_78596231_78596990_78597136_78598470_78598648_78603101_78603184_78605364_78605594_78607476_78607643_78610317_78610506_78610934_78611091_78612319_78612386_78614725_78614866_78617414_78617563_78619818_78619922_78622173
ENSMUSG00000046191.8_0	chr18	+	3541	1	FSM	ENSMUSG00000046191.8	ENSMUST00000052179.8	3559	1	12	6	12	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAATGATTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	37637328	37640869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37637300_37640900
ENSMUSG00000046201.10_0	chr17	+	4849	20	FSM	ENSMUSG00000046201.10	ENSMUST00000076734.8	4866	20	13	4	13	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTGTTCTAGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	3165266	3249130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_3165694_3195349_3195434_3198810_3198856_3209437_3209600_3213233_3213388_3214421_3214553_3218237_3218415_3219601_3219682_3221377_3221496_3227367_3227500_3227885_3227999_3228429_3228624_3235338_3235440_3236035_3236150_3237863_3238021_3240421_3240556_3242091_3242237_3243288_3243358_3246052_3246269_3247034
ENSMUSG00000046223.11_0	chr7	+	1494	7	FSM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCATGCCTGGCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	24161914	24175386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24161993_24164555_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ENSMUSG00000046223.11_4	chr7	+	1420	6	ISM	ENSMUSG00000046223.11	ENSMUST00000002284.11	1506	7	2643	6	2643	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCATGCCTGGCTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	24164551	24175386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_24164667_24166099_24166244_24171323_24171480_24171997_24172133_24173634_24173782_24174663
ENSMUSG00000046229.11_0	chr2	-	794	2	FSM	ENSMUSG00000046229.11	ENSMUST00000079125.8	803	2	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCTGCTGTGTCTTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	156154659	156153766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156154323_156154421
ENSMUSG00000046230.12_0	chr19	-	10825	72	FSM	ENSMUSG00000046230.12	ENSMUST00000068156.8	10838	72	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTTTGGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	16758284	16593055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617565_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ENSMUSG00000046230.12_8	chr19	-	10815	72	NNC	ENSMUSG00000046230.12	novel	10838	72	NA	NA	16	-6	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGTTTGGTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	16758275	16593055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr19_-_16594280_16596457_16596533_16596741_16596866_16597987_16598074_16613132_16613245_16617353_16617478_16617566_16617612_16617900_16618065_16618147_16618224_16618921_16619036_16621112_16621195_16623212_16623359_16624956_16625071_16628782_16628889_16630050_16630121_16631204_16631287_16631704_16631852_16632572_16632724_16633222_16633456_16635967_16636098_16637811_16637946_16638360_16638490_16641115_16641263_16641371_16641477_16641872_16642269_16643517_16643801_16645961_16646066_16653409_16653571_16655217_16655474_16655608_16655768_16657373_16657476_16659233_16659591_16660147_16660241_16662641_16662875_16663792_16664008_16664447_16664618_16665310_16665436_16669110_16669262_16672822_16672971_16676171_16676477_16678484_16678653_16680867_16680972_16681051_16681169_16681895_16682050_16683238_16683299_16684690_16684771_16687634_16687792_16688150_16688306_16692412_16692492_16697692_16697832_16699758_16699877_16701003_16701137_16702920_16703058_16712078_16712194_16712278_16712466_16718126_16718270_16718540_16718636_16719802_16719933_16720359_16720423_16722149_16722322_16723024_16723132_16723314_16723443_16726889_16726948_16727210_16727292_16727485_16727546_16729482_16729543_16731615_16731726_16736950_16737053_16737304_16737401_16739512_16739556_16743860_16743905_16758033
ENSMUSG00000046242.9_0	chr9	+	888	8	FSM	ENSMUSG00000046242.9	ENST00000383180.6	891	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGATAATGGCTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	99333938	99352982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99334010_99338215_99338321_99341742_99341847_99342581_99342719_99350228_99350312_99350679_99350773_99351653_99351809_99352842
ENSMUSG00000046242.9_11	chr9	+	704	6	FSM	ENSMUSG00000046242.9	ENST00000317876.8	716	6	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGATAATGGCTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	99341750	99352982	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99341847_99342581_99342719_99350228_99350312_99350679_99350773_99351653_99351809_99352842
ENSMUSG00000046295.14_0	chr8	+	2128	9	FSM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	3	5	3	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATGCTACTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	71858656	71862543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUSG00000046295.14_1	chr8	+	1626	9	FSM	ENSMUSG00000046295.14	ENSMUST00000120725.2	1641	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCAGAGGACAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	71858675	71862120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71858742_71858830_71858984_71859322_71859429_71859505_71859618_71859916_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUSG00000046295.14_4	chr8	+	2040	8	ISM	ENSMUSG00000046295.14	ENSMUST00000119976.8	2136	9	176	9	162	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGAATGCTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71858829	71862539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_71858984_71859322_71859429_71859505_71859618_71859856_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUSG00000046295.14_5	chr8	+	1567	8	ISM	ENSMUSG00000046295.14	ENSMUST00000120725.2	1641	9	162	1	162	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACAGTGTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	71858829	71862126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_71858984_71859322_71859429_71859505_71859618_71859916_71860394_71860514_71860687_71861308_71861469_71861565_71861696_71861870
ENSMUSG00000046311.14_0	chr11	+	3851	4	FSM	ENSMUSG00000046311.14	ENSMUST00000109198.8	3872	4	7	14	7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATGTTTCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	49094125	49109366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105890
ENSMUSG00000046311.14_11	chr11	+	3549	1	ISM	ENSMUSG00000046311.14	ENST00000502412.2	3608	2	11578	6	515	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	603	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTTTAAAAACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	49105890	49109439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_49105900_49109400
ENSMUSG00000046311.14_2	chr11	+	3602	2	FSM	ENSMUSG00000046311.14	ENST00000502412.2	3608	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTTTAAAAACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	49094312	49109439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49094366_49105890
ENSMUSG00000046311.14_3	chr11	+	3647	2	FSM	ENSMUSG00000046311.14	ENST00000512132.5	3653	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTTTAAAAACAATACTT	NA	NA	NA	NA	NA	NA	NA	NA	49094312	49109439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49094366_49105845
ENSMUSG00000046311.14_4	chr11	+	4018	5	FSM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	0	11	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGACAAATAGTAGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	49094324	49109632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_49094366_49103521_49103604_49104416_49104470_49105381_49105482_49105890
ENSMUSG00000046311.14_8	chr11	+	3971	4	ISM	ENSMUSG00000046311.14	ENSMUST00000109197.8	4029	5	9203	11	13	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGACAAATAGTAGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	49103527	49109632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_49103604_49104416_49104470_49105381_49105482_49105890
ENSMUSG00000046312.5_0	chr4	-	4158	2	FSM	ENSMUSG00000046312.5	ENSMUST00000054920.5	4173	2	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGTAGTATTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	41503070	41495612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41499691_41502990
ENSMUSG00000046312.5_1	chr4	-	4080	1	NIC	ENSMUSG00000046312.5	novel	4173	2	NA	NA	3384	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAGTAGTATTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	41499692	41495612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_41495600_41499700
ENSMUSG00000046324.13_0	chr19	-	7039	15	FSM	ENSMUSG00000046324.13	ENSMUST00000159692.8	7058	15	3	16	3	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAACTCAAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	29625812	29585629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29590080_29590168_29590333_29593122_29593239_29593916_29594120_29595217_29595371_29600468_29600660_29601040_29601216_29604246_29604468_29606003_29606217_29608742_29608836_29609790_29609938_29614690_29614797_29617256_29617385_29623366_29623669_29625435
ENSMUSG00000046329.15_0	chr17	-	3344	10	FSM	ENSMUSG00000046329.15	ENSMUST00000040280.14	3362	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATTACTGTTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	57366854	57350719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57352664_57354185_57354337_57359681_57359850_57360240_57360349_57360546_57360700_57360783_57360943_57362273_57362386_57363581_57363670_57365107_57365235_57366520
ENSMUSG00000046330.11_0	chr1	+	551	4	FSM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAATTATGTACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	72750448	72752965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72750483_72750830_72750960_72751300_72751384_72752660
ENSMUSG00000046330.11_13	chr1	+	506	3	ISM	ENSMUSG00000046330.11	ENSMUST00000059980.11	558	4	393	7	-28	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACAATTATGTACATAGC	NA	NA	NA	NA	NA	NA	NA	NA	72750841	72752965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_72750960_72751300_72751384_72752660
ENSMUSG00000046330.11_15	chr1	+	223	3	FSM	ENSMUSG00000046330.11	ENST00000473096.1	238	3	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCAGTAGAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	72750875	72752712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_72750964_72751300_72751384_72752660
ENSMUSG00000046338.5_0	chr2	+	2241	21	FSM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAAACTCAAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127267109	127277909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_127267142_127269222_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275669_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046338.5_8	chr2	+	2200	20	ISM	ENSMUSG00000046338.5	ENST00000453542.5	2244	21	2122	3	2113	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTAAACTCAAGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	127269231	127277909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_127269292_127269412_127269527_127270165_127270240_127270604_127270710_127270916_127271046_127272774_127272875_127273202_127273337_127273582_127273683_127274291_127274415_127274569_127274653_127274891_127275011_127275505_127275577_127275669_127275911_127275997_127276147_127276307_127276386_127276711_127276844_127276926_127277048_127277130_127277197_127277394_127277451_127277764
ENSMUSG00000046351.12_0	chr13	-	4831	4	FSM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACTCCATTTTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	23553375	23537282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23541884_23546972_23547046_23552289_23552376_23553304
ENSMUSG00000046351.12_1	chr13	-	4761	3	ISM	ENSMUSG00000046351.12	ENSMUST00000050101.9	4844	4	1003	9	1003	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTCCATTTTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	23552375	23537281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_23541884_23546972_23547046_23552289
ENSMUSG00000046364.15_0	chr7	+	1149	5	FSM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCTACATCTTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	109118356	109121568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109118430_109118791_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUSG00000046364.15_6	chr7	+	1076	4	ISM	ENSMUSG00000046364.15	ENSMUST00000143107.2	1158	5	438	6	438	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCTACATCTTTAAATC	NA	NA	NA	NA	NA	NA	NA	NA	109118791	109121568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_109118856_109119124_109119201_109119674_109119850_109120807
ENSMUSG00000046380.4_0	chr15	-	5838	2	FSM	ENSMUSG00000046380.4	ENSMUST00000050234.4	5853	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTATGTTCCTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74581376	74574156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74579714_74581095
ENSMUSG00000046387.6_0	chr18	+	4643	1	FSM	ENSMUSG00000046387.6	ENSMUST00000053856.6	4660	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAGTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37617857	37622500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37617900_37622500
ENSMUSG00000046402.11_0	chr9	+	2645	4	FSM	ENSMUSG00000046402.11	ENSMUST00000052068.11	2652	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCACATCTACCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	98305013	98328621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98307105_98307505_98307685_98326642_98326745_98328348
ENSMUSG00000046404.6_0	chr1	+	6106	2	FSM	ENSMUSG00000046404.6	ENSMUST00000049813.6	6128	2	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATTGTTGTGCGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	130645077	130652087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_130645549_130646452
ENSMUSG00000046408.16_0	chr8	+	1281	6	FSM	ENSMUSG00000046408.16	ENSMUST00000060357.15	1291	6	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCAGAGGTTCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	84728130	84731389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84728535_84729486_84729632_84729744_84729846_84729924_84730111_84730553_84730689_84731079
ENSMUSG00000046413.15_0	chr8	+	2976	4	NIC	ENSMUSG00000046413.15	novel	2988	5	NA	NA	11	-3	intron_retention	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCAGCATTGTGTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	92527053	92534164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_92527167_92530440_92530664_92531069_92531472_92531926
ENSMUSG00000046417.15_0	chr11	-	1969	4	FSM	ENSMUSG00000046417.15	ENSMUST00000057194.9	1984	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACCAATACGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62539343	62495718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62497073_62500028_62500142_62511259_62511389_62538970
ENSMUSG00000046417.15_1	chr11	-	995	3	FSM	ENSMUSG00000046417.15	ENST00000409083.7	1007	3	12	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGGCCAGGAAAGTACAGA	NA	NA	NA	NA	NA	NA	NA	NA	62539343	62496579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62497073_62511259_62511389_62538970
ENSMUSG00000046432.13_0	chrX	+	900	3	FSM	ENSMUSG00000046432.13	ENSMUST00000178632.8	933	3	13	20	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAGCCACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	135171014	135172707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135171151_135171558_135171632_135172016
ENSMUSG00000046432.13_1	chrX	+	901	3	FSM	ENSMUSG00000046432.13	ENSMUST00000053540.11	930	3	11	18	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAGCCACAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	135171020	135172709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135171151_135171558_135171632_135172011
ENSMUSG00000046432.13_7	chrX	+	805	3	FSM	ENSMUSG00000046432.13	ENSMUST00000113112.2	826	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGATTAAAAAAAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	135171062	135172701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135171151_135171558_135171632_135172057
ENSMUSG00000046434.17_0	chr15	+	1911	11	FSM	ENSMUSG00000046434.17	ENSMUST00000036004.16	1918	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	103148865	103153382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103151348_103151508_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_10	chr15	+	1734	10	FSM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	103148883	103153382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103148956_103149506_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046434.17_35	chr15	+	1662	9	ISM	ENSMUSG00000046434.17	ENSMUST00000087351.9	1737	10	626	0	586	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAATGACAACTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	103149506	103153382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_103149624_103149872_103150020_103150329_103150541_103150632_103150726_103150806_103150900_103151070_103151146_103152051_103152208_103152385_103152456_103152682
ENSMUSG00000046441.6_0	chr8	+	3535	2	FSM	ENSMUSG00000046441.6	ENSMUST00000056972.6	3545	2	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTGTTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110944624	110951112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_110944719_110947671
ENSMUSG00000046441.6_1	chr8	+	3442	1	NIC	ENSMUSG00000046441.6	novel	3545	2	NA	NA	3050	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGTGTGTTTTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	110947670	110951112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_110947700_110951100
ENSMUSG00000046460.16_0	chr9	+	1682	7	FSM	ENSMUSG00000046460.16	ENST00000328828.6	1699	7	11	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCACACCTGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	54441435	54451091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54441606_54442892_54442983_54446247_54446414_54446661_54446869_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046460.16_5	chr9	+	1500	6	FSM	ENSMUSG00000046460.16	ENST00000409568.6	1511	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCACACCTGCCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	54442904	54451091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_54442983_54446247_54446414_54446661_54446869_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046460.16_8	chr9	+	1421	5	ISM	ENSMUSG00000046460.16	ENST00000409568.6	1511	6	3348	7	-20	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTCCACACCTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	54446247	54451090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_54446414_54446661_54446869_54448097_54448582_54448725_54448785_54450585
ENSMUSG00000046463.6_0	chr10	+	2101	1	FSM	ENSMUSG00000046463.6	ENSMUST00000062667.4	2122	1	11	10	11	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCCAACTCAAAAGGGAAC	NA	NA	NA	NA	NA	NA	NA	NA	37015564	37017665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_37015600_37017700
ENSMUSG00000046470.6_0	chr2	-	1595	2	FSM	ENSMUSG00000046470.6	ENSMUST00000054491.6	1620	2	22	3	22	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGATCACTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	181313411	181311631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181312790_181312974
ENSMUSG00000046480.7_0	chr9	+	540	3	FSM	ENSMUSG00000046480.7	ENST00000529878.1	552	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAAGTCCTATCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45050138	45061856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45050401_45060563_45060694_45061708
ENSMUSG00000046516.11_0	chr16	+	432	3	FSM	ENSMUSG00000046516.11	ENSMUST00000050273.9	444	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTCTTTGTTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38167360	38173121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38167570_38169602_38169692_38172987
ENSMUSG00000046519.16_0	chr3	+	2817	5	FSM	ENSMUSG00000046519.16	ENSMUST00000177390.8	2836	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTACCTCTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	95496253	95526543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95496446_95499027_95499217_95515216_95515349_95516982_95517098_95524354
ENSMUSG00000046532.9_0	chrX	+	10027	8	FSM	ENSMUSG00000046532.9	ENSMUST00000052837.9	10048	8	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACATGTGTGACTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	97192393	97366819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_97194941_97295291_97295444_97330194_97330312_97348842_97349131_97354583_97354729_97358481_97358613_97359457_97359616_97360330
ENSMUSG00000046541.10_0	chr7	+	3375	3	FSM	ENSMUSG00000046541.10	ENSMUST00000055604.6	3380	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGAAAGGTACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	24920849	24926927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24920930_24923539_24923633_24923725
ENSMUSG00000046541.10_1	chr7	+	3295	2	ISM	ENSMUSG00000046541.10	ENSMUST00000055604.6	3380	3	2688	7	2688	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGCAGAAAGGTACCCC	NA	NA	NA	NA	NA	NA	NA	NA	24923537	24926925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_24923633_24923725
ENSMUSG00000046546.4_0	chr16	+	3067	1	FSM	ENSMUSG00000046546.4	ENSMUST00000059078.4	3075	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGGCGAGAGCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	30418540	30421607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_30418500_30421600
ENSMUSG00000046550.9_0	chrX	+	1279	2	FSM	ENSMUSG00000046550.9	ENSMUST00000049999.9	1309	2	20	10	20	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATAATTAGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	152615308	152617229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152615545_152616186
ENSMUSG00000046550.9_1	chrX	+	1227	2	FSM	ENSMUSG00000046550.9	ENST00000374908.1	1244	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGAGCCCCAGTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	152616263	152617536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152617409_152617454
ENSMUSG00000046550.9_2	chrX	+	531	2	FSM	ENSMUSG00000046550.9	ENST00000614076.1	537	2	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGGAAACTACCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	152616259	152617093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152616408_152616710
ENSMUSG00000046556.8_0	chr8	-	7203	2	FSM	ENSMUSG00000046556.8	ENSMUST00000057717.8	7232	2	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTGAATTGGTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	96058559	96049648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96056441_96058148
ENSMUSG00000046561.10_0	chr3	+	3840	2	FSM	ENSMUSG00000046561.10	ENSMUST00000093976.4	3859	2	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCATTAGTGTGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	126157346	126234019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126158815_126231647
ENSMUSG00000046562.6_0	chr5	-	3647	5	FSM	ENSMUSG00000046562.6	ENSMUST00000060798.6	3659	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGACTTGCCTCCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	115273029	115260615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115263560_115265069_115265243_115265360_115265473_115268525_115268640_115272725
ENSMUSG00000046567.11_0	chr10	-	2530	7	FSM	ENSMUSG00000046567.11	ENSMUST00000054471.10	2564	7	21	13	21	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCAAATAATAAGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	100425236	100408139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046567.11_14	chr10	-	394	3	FSM	ENSMUSG00000046567.11	ENST00000514668.3	405	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCTATGGTAAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	100419863	100413033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_100413221_100414176_100414292_100419771
ENSMUSG00000046567.11_4	chr10	-	1033	8	FSM	ENSMUSG00000046567.11	ENST00000356891.4	1041	8	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTACATACAGGATAC	NA	NA	NA	NA	NA	NA	NA	NA	100424973	100408739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_100408769_100409402_100409623_100411578_100411749_100413022_100413221_100414176_100414294_100419775_100419872_100422052_100422171_100424888
ENSMUSG00000046572.11_0	chr5	-	6809	3	FSM	ENSMUSG00000046572.11	ENSMUST00000179555.8	6816	3	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTACTGCTCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	38842169	38825833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38832197_38839827_38840126_38842021
ENSMUSG00000046573.8_0	chr13	-	2073	3	FSM	ENSMUSG00000046573.8	ENSMUST00000053265.8	2086	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCCAGCACCCAGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	36301502	36162383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_36163891_36276788_36276910_36301057
ENSMUSG00000046574.9_0	chr7	-	7012	14	FSM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAAACAAGCATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	44702305	44676997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262_44699553_44699628_44699791_44700641_44700755_44702219
ENSMUSG00000046574.9_1	chr7	-	6912	13	ISM	ENSMUSG00000046574.9	ENSMUST00000057293.8	7023	14	1565	11	1565	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAAACAAGCATGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	44700740	44676997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44678049_44678182_44678279_44678361_44678509_44680034_44680133_44680424_44680551_44683168_44683657_44684032_44684167_44684302_44684420_44692775_44693213_44695146_44695814_44696262_44699553_44699628_44699791_44700641
ENSMUSG00000046589.8_0	chr8	+	3861	3	FSM	ENSMUSG00000046589.8	ENSMUST00000053035.7	3878	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCCACCTCCTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	4276835	4287462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4277006_4281661_4281805_4283914
ENSMUSG00000046591.11_0	chr7	+	7170	22	FSM	ENSMUSG00000046591.11	ENSMUST00000035977.9	7199	22	15	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTCTAAAAATGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	79309958	79347882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79310751_79315410_79315688_79317407_79317647_79319195_79319431_79320613_79320744_79325019_79325157_79326974_79327194_79328762_79328915_79330655_79330757_79331557_79331652_79331737_79331818_79331996_79332225_79332703_79332801_79333951_79334010_79335524_79335687_79337973_79338065_79339655_79339715_79340619_79340752_79341569_79341728_79343448_79345571_79345682_79345809_79346401
ENSMUSG00000046598.16_0	chr16	+	3109	7	FSM	ENSMUSG00000046598.16	ENSMUST00000115227.10	3122	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACACTCGCAGAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31247572	31277713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31247806_31256809_31256936_31265409_31265483_31266370_31266482_31268641_31268784_31273845_31273999_31275442
ENSMUSG00000046603.17_0	chr9	+	3029	11	FSM	ENSMUSG00000046603.17	ENSMUST00000052740.14	3049	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACAGCTGCGTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	122634615	122665391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122634754_122637831_122637902_122640822_122640959_122643496_122643654_122647838_122648092_122653527_122653651_122655257_122655356_122655911_122656004_122660684_122660924_122662590_122662723_122663800
ENSMUSG00000046605.15_0	chr11	-	2841	13	FSM	ENSMUSG00000046605.15	ENSMUST00000067399.14	2864	13	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGGCACAATCTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	121563968	121507034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121508679_121510460_121510555_121514257_121514333_121514747_121514817_121514917_121515054_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ENSMUSG00000046605.15_3	chr11	-	1463	9	FSM	ENSMUSG00000046605.15	ENSMUST00000062654.8	1488	9	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGACCTGAATCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121563963	121518102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_121518748_121520698_121520824_121521597_121521694_121530577_121530674_121535352_121535419_121542434_121542500_121561695_121561796_121561882_121562000_121563810
ENSMUSG00000046618.8_0	chr2	+	5545	8	FSM	ENSMUSG00000046618.8	ENSMUST00000057279.6	5579	8	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGTAAAGTGTTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	38822016	38853758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38822194_38831527_38831792_38837227_38837336_38838931_38839142_38841152_38841427_38844506_38844801_38847697_38847884_38849726
ENSMUSG00000046623.9_0	chr4	-	1441	2	FSM	ENSMUSG00000046623.9	ENSMUST00000060419.2	1445	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTTGTAGTCAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	127247874	127244882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_127246275_127247825
ENSMUSG00000046623.9_1	chr4	-	1384	1	ISM	ENSMUSG00000046623.9	ENSMUST00000106090.8	1446	2	1608	4	1608	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTTTGTAGTCAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	127246266	127244882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_127244900_127246300
ENSMUSG00000046637.4_1	chr4	+	3221	8	FSM	ENSMUSG00000046637.4	ENST00000401095.8	3240	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTACACTAACCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	154923275	154950228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154924068_154940095_154940925_154942417_154942644_154943766_154943972_154945017_154945185_154945618_154945890_154946550_154946766_154949712
ENSMUSG00000046650.5_0	chr19	+	7507	3	FSM	ENSMUSG00000046650.5	ENSMUST00000216145.2	7542	3	28	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTGTCCTCTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	12364679	12378941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12364787_12365840_12365908_12371608
ENSMUSG00000046658.17_0	chr5	-	6872	7	FSM	ENSMUSG00000046658.17	ENSMUST00000161448.8	6891	7	19	0	19	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	143255758	143235451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143241321_143248547_143248662_143249050_143249178_143249805_143249898_143250047_143250437_143250760_143250889_143255605
ENSMUSG00000046668.10_0	chr18	+	2552	3	FSM	ENSMUSG00000046668.10	ENST00000302517.8	2560	3	7	1	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAACACTCCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35962839	35994737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35963293_35991445_35992510_35993702
ENSMUSG00000046668.10_1	chr18	+	2289	3	FSM	ENSMUSG00000046668.10	ENSMUST00000060722.8	2302	3	9	4	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAACACTCCTGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	35962849	35994737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35963040_35991445_35992510_35993702
ENSMUSG00000046671.19_0	chr4	-	2007	7	FSM	ENSMUSG00000046671.19	ENSMUST00000102550.10	2025	7	11	7	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTTTCTTGGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	134262568	134252867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262392
ENSMUSG00000046671.19_1	chr4	-	1952	7	FSM	ENSMUSG00000046671.19	ENSMUST00000116279.10	1969	7	9	8	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGTGAATTTTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	134262689	134252875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134253824_134256399_134256722_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262560
ENSMUSG00000046671.19_18	chr4	-	658	5	FSM	ENSMUSG00000046671.19	ENST00000526894.5	673	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACCTGTGAGTATCTGAC	NA	NA	NA	NA	NA	NA	NA	NA	134260031	134256406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134256544_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046671.19_7	chr4	-	1778	7	FSM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGTGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134262622	134252877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134253824_134256399_134256613_134257585_134257798_134257990_134258101_134259454_134259560_134259937_134260064_134262556
ENSMUSG00000046671.19_8	chr4	-	1707	6	ISM	ENSMUSG00000046671.19	ENST00000474295.5	1782	7	2565	3	-20	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGGTGAATTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134260058	134252877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_134253824_134256399_134256613_134257585_134257798_134257990_134258101_134259454_134259560_134259937
ENSMUSG00000046675.8_0	chr12	+	3348	2	FSM	ENSMUSG00000046675.8	ENSMUST00000057416.8	3367	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTACCAGCCGTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	102710032	102713813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_102710426_102710858
ENSMUSG00000046679.17_0	chr6	+	2519	10	FSM	ENSMUSG00000046679.17	ENSMUST00000050497.14	2534	10	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86415367	86447367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86415470_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUSG00000046679.17_3	chr6	+	2519	10	FSM	ENSMUSG00000046679.17	ENSMUST00000113700.8	2523	10	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86415674	86447367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86415777_86420708_86420958_86422415_86423251_86424292_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUSG00000046679.17_4	chr6	+	2917	10	FSM	ENSMUSG00000046679.17	ENSMUST00000113698.8	2922	10	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGCCATTGATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	86415710	86447367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86416241_86420708_86420958_86422415_86423251_86424322_86424404_86426742_86426848_86430590_86430696_86434797_86434906_86439562_86439664_86442782_86442946_86446727
ENSMUSG00000046688.15_0	chr3	+	2230	3	FSM	ENSMUSG00000046688.15	ENSMUST00000054483.14	2245	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCATGTGAATGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	127583464	127592034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_127583821_127585121_127585179_127590217
ENSMUSG00000046688.15_1	chr3	+	1631	2	FSM	ENSMUSG00000046688.15	ENSMUST00000163775.6	1646	2	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAAAATTTTAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	127583565	127591593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_127583821_127590217
ENSMUSG00000046688.15_2	chr3	+	2518	2	FSM	ENSMUSG00000046688.15	ENSMUST00000171621.3	2547	2	25	4	25	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCATGTGAATGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	127584477	127592034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_127585179_127590217
ENSMUSG00000046691.15_0	chr8	-	2924	4	FSM	ENSMUSG00000046691.15	ENSMUST00000177068.8	2931	4	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107620219	107610495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107613159_107613551_107613670_107613932_107613989_107620132
ENSMUSG00000046691.15_1	chr8	-	2839	3	ISM	ENSMUSG00000046691.15	ENSMUST00000175940.2	2890	4	5857	-30	5857	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTCTGCTTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107613990	107610495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_107613159_107613551_107613670_107613932
ENSMUSG00000046694.7_0	chr4	+	2267	2	FSM	ENSMUSG00000046694.7	ENSMUST00000051676.7	2287	2	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACCATAACTGTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	133207456	133215243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133207875_133213394
ENSMUSG00000046707.10_0	chr8	-	3747	12	FSM	ENSMUSG00000046707.10	ENSMUST00000056919.9	3773	12	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTTACAATGACTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96215436	96172730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96175047_96179977_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ENSMUSG00000046707.10_2	chr8	-	6763	11	FSM	ENSMUSG00000046707.10	ENSMUST00000212214.2	6779	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGATGGAGCGT	NA	NA	NA	NA	NA	NA	NA	NA	96215397	96174606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96180072_96182485_96182635_96184015_96184117_96186699_96186802_96187305_96187417_96188173_96188258_96192278_96192339_96199998_96200050_96203839_96203942_96214192_96214305_96214971
ENSMUSG00000046711.17_0	chr17	+	1664	5	FSM	ENSMUSG00000046711.17	ENSMUST00000232265.2	1681	5	11	6	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	27775558	27782642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27775686_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_1	chr17	+	1621	5	FSM	ENSMUSG00000046711.17	ENSMUST00000114888.11	1631	5	10	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	27775568	27782642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27775686_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_3	chr17	+	1989	5	FSM	ENSMUSG00000046711.17	ENSMUST00000231874.2	2001	5	11	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	27775588	27782642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27776041_27778506_27778678_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_5	chr17	+	1711	6	FSM	ENSMUSG00000046711.17	ENSMUST00000231825.2	1717	6	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTCTGGTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	27775593	27782642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27775686_27775925_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046711.17_9	chr17	+	1884	5	FSM	ENSMUSG00000046711.17	ENSMUST00000118570.2	1898	5	14	0	-13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGACAGTCTCTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	27775655	27782637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27776041_27778506_27778645_27779901_27779986_27780434_27780486_27781411
ENSMUSG00000046714.8_0	chr8	+	2706	1	FSM	ENSMUSG00000046714.8	ENSMUST00000054691.8	2725	1	16	3	16	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCGGACAGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	121842925	121845631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121842900_121845600
ENSMUSG00000046718.9_0	chr8	-	768	5	FSM	ENSMUSG00000046718.9	ENSMUST00000051672.9	792	5	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAAAAAGAAAGAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	71990090	71986912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71987125_71987315_71987437_71988429_71988470_71989002_71989079_71989771
ENSMUSG00000046721.12_0	chr7	+	627	1	FSM	ENSMUSG00000046721.12	ENSMUST00000026901.12	653	1	23	3	23	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCTACACAGAATAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	44974411	44975038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44974400_44975000
ENSMUSG00000046722.15_0	chr3	+	2780	5	FSM	ENSMUSG00000046722.15	ENSMUST00000053872.12	2805	5	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAATTAAGCAAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	95136054	95143707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95136177_95139095_95139404_95139859_95139971_95140798_95140891_95141560
ENSMUSG00000046727.14_0	chr18	+	816	3	FSM	ENSMUSG00000046727.14	ENSMUST00000050584.10	831	3	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTGGCTGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	36481755	36536024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36481870_36499567_36499795_36535549
ENSMUSG00000046731.6_0	chr11	-	2715	1	FSM	ENSMUSG00000046731.6	ENSMUST00000238978.2	2721	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCATGACGTGTAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	69771811	69769096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69769100_69771800
ENSMUSG00000046733.8_0	chr6	+	2063	4	FSM	ENSMUSG00000046733.8	ENSMUST00000050104.8	2083	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCTAAATGTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	135042658	135061697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_135042774_135055543_135056483_135060440_135060497_135060744
ENSMUSG00000046743.7_0	chr3	+	16080	17	FSM	ENSMUSG00000046743.7	ENSMUST00000061260.8	16109	17	21	8	21	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAATACTGTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	38941109	39066126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_38946284_38996957_38997090_39003589_39003852_39005171_39005523_39010821_39011745_39012549_39012725_39024774_39024956_39031415_39031667_39033799_39038150_39045782_39045888_39050044_39050353_39053220_39053307_39054258_39054439_39055261_39055387_39056909_39057128_39061240_39061503_39063129
ENSMUSG00000046750.19_0	chr7	-	357	3	FSM	ENSMUSG00000046750.19	ENST00000622070.2	364	3	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGCCTTCAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	27987618	27984009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27984189_27987361_27987468_27987546
ENSMUSG00000046750.19_1	chr7	-	284	2	ISM	ENSMUSG00000046750.19	ENST00000622070.2	364	3	155	4	155	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTAGGCCTTCAGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	27987466	27984009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_27984189_27987361
ENSMUSG00000046753.11_0	chr14	-	4255	18	FSM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCAAGAGATGACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	27230417	27203053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607_27228673_27230378
ENSMUSG00000046753.11_1	chr14	-	4209	17	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	1752	7	1737	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCAAGAGATGACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	27228665	27203053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594_27227621_27228607
ENSMUSG00000046753.11_2	chr14	-	4152	16	ISM	ENSMUSG00000046753.11	ENSMUST00000223689.2	4262	18	2796	7	2781	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCAAGAGATGACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	27227621	27203053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_27204560_27205764_27205890_27206021_27206276_27207049_27207091_27208419_27208908_27211990_27212102_27212619_27212765_27213744_27213907_27214975_27215061_27215228_27215480_27216037_27216170_27219295_27219409_27220397_27220502_27220680_27220847_27222197_27222640_27227594
ENSMUSG00000046756.11_0	chr11	+	1937	5	FSM	ENSMUSG00000046756.11	ENSMUST00000058109.9	1962	5	13	12	13	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAAAACACCATTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	115494763	115498850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115495070_115495546_115495739_115495848_115495913_115496795_115496964_115497643
ENSMUSG00000046756.11_6	chr11	+	608	4	FSM	ENSMUSG00000046756.11	ENST00000544148.1	621	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGCAGGAGAGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	115495558	115497859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115495739_115495848_115495913_115496815_115496964_115497643
ENSMUSG00000046761.14_0	chr15	-	4532	5	FSM	ENSMUSG00000046761.14	ENSMUST00000170153.2	4534	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCCTCAGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	75881345	75872941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75881222
ENSMUSG00000046761.14_1	chr15	-	4498	5	FSM	ENSMUSG00000046761.14	ENSMUST00000060807.12	4502	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAAGCCTCAGTAAATT	NA	NA	NA	NA	NA	NA	NA	NA	75886181	75872941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75876599_75876789_75876915_75876983_75877149_75877949_75878412_75886092
ENSMUSG00000046768.14_0	chr12	+	4873	4	FSM	ENSMUSG00000046768.14	ENSMUST00000118966.8	4892	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAACAATTTCATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	75355107	75444723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_75355776_75422121_75422181_75438452_75438618_75440742
ENSMUSG00000046768.14_1	chr12	+	2342	5	FSM	ENSMUSG00000046768.14	ENSMUST00000055390.6	2350	5	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTTAGTACTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75355102	75448229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_75355776_75422121_75422181_75438452_75438618_75440742_75440839_75446880
ENSMUSG00000046785.9_0	chr9	+	4236	2	FSM	ENSMUSG00000046785.9	ENSMUST00000135807.2	4245	2	9	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTTGTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	111101005	111108157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_111103596_111106511
ENSMUSG00000046785.9_1	chr9	+	7135	1	FSM	ENSMUSG00000046785.9	ENSMUST00000060711.8	7149	1	10	4	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCCTTGTGTTTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	111101022	111108157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_111101000_111108200
ENSMUSG00000046791.9_0	chr12	+	2321	1	FSM	ENSMUSG00000046791.9	ENSMUST00000053744.9	2344	1	15	8	15	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCATCTTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	83997396	83999717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_83997400_83999700
ENSMUSG00000046792.9_0	chr7	-	1881	3	FSM	ENSMUSG00000046792.9	ENSMUST00000094870.3	1897	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCCCAGCACTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6158962	6134497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6136171_6146060_6146150_6158843
ENSMUSG00000046792.9_1	chr7	-	549	3	FSM	ENSMUSG00000046792.9	ENSMUST00000207628.2	576	3	20	7	-6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCCTGACAACTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	6158976	6145291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6145619_6146060_6146150_6158843
ENSMUSG00000046793.9_0	chr3	-	2764	3	FSM	ENSMUSG00000046793.9	ENST00000618721.4	2776	3	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGATAAAAAGTTATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	108062215	108055996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108056489_108057067_108059260_108062135
ENSMUSG00000046793.9_1	chr3	-	2686	2	ISM	ENSMUSG00000046793.9	ENST00000618721.4	2776	3	2957	9	2937	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGATAAAAAGTTATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	108059261	108055996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_108056489_108057067
ENSMUSG00000046798.15_0	chr5	-	3704	4	ISM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	429	7	370	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCATGGCTGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5564360	5555021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564231
ENSMUSG00000046798.15_1	chr5	-	3745	5	FSM	ENSMUSG00000046798.15	ENSMUST00000179804.8	3752	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACCATGGCTGCGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	5564789	5555021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564231_5564377_5564764
ENSMUSG00000046798.15_2	chr5	-	3587	4	FSM	ENSMUSG00000046798.15	ENSMUST00000060947.14	3597	4	6	4	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTTTGTCTCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	5564867	5555112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5558455_5561070_5561123_5563161_5563252_5564764
ENSMUSG00000046806.14_2	chr6	-	3666	4	FSM	ENSMUSG00000046806.14	ENSMUST00000055097.11	3681	4	10	5	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACAGTGTTTTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	34854946	34848710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854509
ENSMUSG00000046806.14_3	chr6	-	3315	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115007.9	3326	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTACCACCATAGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34854989	34848779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34851631_34852471_34852548_34853473_34853707_34854834
ENSMUSG00000046806.14_5	chr6	-	1476	4	FSM	ENSMUSG00000046806.14	ENSMUST00000115006.2	1501	4	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTGACGACTATTC	NA	NA	NA	NA	NA	NA	NA	NA	34854919	34850629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34851631_34852390_34852548_34853473_34853707_34854834
ENSMUSG00000046807.11_0	chr10	-	4590	4	FSM	ENSMUSG00000046807.11	ENSMUST00000051129.10	4601	4	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTTTAAAGTGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	75396161	75385966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75389955_75391783_75391885_75393053_75393183_75395789
ENSMUSG00000046808.18_3	chr5	+	1288	8	FSM	ENSMUSG00000046808.18	ENST00000504445.1	1305	8	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAGCGTGACGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	72387625	72412486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_72387815_72396440_72396646_72399378_72399465_72403046_72403154_72403434_72403567_72404159_72404288_72404440_72404649_72412253
ENSMUSG00000046814.4_0	chr2	+	636	3	FSM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTGCAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	118998261	119002870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118998355_119000156_119000252_119002422
ENSMUSG00000046814.4_2	chr2	+	544	2	ISM	ENSMUSG00000046814.4	ENSMUST00000057454.4	645	3	1902	1	1902	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTTGTGCAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	119000155	119002870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_119000252_119002422
ENSMUSG00000046818.8_0	chr3	+	2700	3	FSM	ENSMUSG00000046818.8	ENSMUST00000053855.8	2722	3	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAATTCCCTTGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	137329446	137334086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137329645_137329892_137330035_137331726
ENSMUSG00000046822.15_0	chr10	-	3778	4	FSM	ENSMUSG00000046822.15	ENSMUST00000117276.11	3796	4	10	8	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATTTATTTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	80873250	80864379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80867535_80869445_80869768_80870751_80870840_80873037
ENSMUSG00000046822.15_1	chr10	-	3658	4	FSM	ENSMUSG00000046822.15	ENSMUST00000059551.7	3680	4	10	12	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTAAACTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	80873132	80864385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80867535_80869445_80869768_80870751_80870844_80873037
ENSMUSG00000046822.15_2	chr10	-	3430	2	FSM	ENSMUSG00000046822.15	ENSMUST00000168076.2	3461	2	19	12	19	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTAAACTATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	80869727	80864386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80867535_80869445
ENSMUSG00000046836.14_0	chr1	-	3418	14	FSM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	5	7	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGTTCGCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	183078531	183057922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078446
ENSMUSG00000046836.14_1	chr1	-	3406	14	FSM	ENSMUSG00000046836.14	ENSMUST00000163528.8	3413	14	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGTTCGCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	183078798	183057922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340_183076429_183078725
ENSMUSG00000046836.14_2	chr1	-	3334	13	ISM	ENSMUSG00000046836.14	ENSMUST00000057062.12	3430	14	2107	7	2107	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACATGTTCGCTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	183076429	183057922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_183060003_183061033_183061194_183062363_183062515_183062778_183062861_183064049_183064136_183065696_183065787_183066600_183066707_183067689_183067763_183069304_183069401_183073470_183073568_183074038_183074146_183075897_183076015_183076340
ENSMUSG00000046841.6_0	chr10	-	3069	2	FSM	ENSMUSG00000046841.6	ENSMUST00000053871.5	3089	2	13	7	-13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTCAGTCAGTGGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	84369913	84362175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_84364642_84369310
ENSMUSG00000046841.6_1	chr10	-	2604	3	FSM	ENSMUSG00000046841.6	ENSMUST00000167671.2	2606	3	0	2	0	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTGGGCCAGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84369900	84362501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_84364642_84369310_84369736_84369861
ENSMUSG00000046861.10_0	chr4	+	4563	21	FSM	ENSMUSG00000046861.10	ENSMUST00000050067.10	4583	21	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCACGTATATATATGG	NA	NA	NA	NA	NA	NA	NA	NA	116852526	116862467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116852969_116853143_116853305_116853557_116853651_116853728_116853865_116854110_116854227_116854314_116854429_116854544_116854628_116855573_116855740_116855940_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUSG00000046861.10_9	chr4	+	1850	13	FSM	ENSMUSG00000046861.10	ENST00000372168.7	1866	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGACTATGTTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	116855731	116860856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116856023_116856774_116856958_116857085_116857139_116857285_116857351_116857443_116857548_116857793_116857914_116858018_116858109_116859312_116859520_116859706_116859837_116859933_116860009_116860130_116860213_116860315_116860388_116860478
ENSMUSG00000046862.15_0	chr4	+	3869	5	FSM	ENSMUSG00000046862.15	ENSMUST00000059790.11	3886	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTCTGTTTCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	143139008	143147657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_143139662_143141918_143141984_143143209_143143523_143143942_143144531_143145407
ENSMUSG00000046862.15_2	chr4	+	3240	4	FSM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTCTGTTTCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	143139572	143147657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_143139662_143143209_143143523_143143942_143144531_143145407
ENSMUSG00000046862.15_3	chr4	+	3152	3	ISM	ENSMUSG00000046862.15	ENSMUST00000037356.8	3260	4	3652	4	3652	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACCTCTGTTTCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	143143208	143147657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_143143523_143143942_143144531_143145407
ENSMUSG00000046865.8_0	chr7	+	1188	9	FSM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27869143	27878694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27869244_27873928_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046865.8_2	chr7	+	1091	8	ISM	ENSMUSG00000046865.8	ENSMUST00000042405.8	1197	9	4791	0	4791	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTCTGGTGCCTATT	NA	NA	NA	NA	NA	NA	NA	NA	27873925	27878694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_27874112_27874209_27874318_27874408_27874504_27875279_27875451_27876567_27876701_27877629_27877743_27878322_27878469_27878555
ENSMUSG00000046873.19_0	chrX	-	4784	11	FSM	ENSMUSG00000046873.19	ENSMUST00000058098.15	4797	11	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTATCATCTTCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	156381705	156330826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156334147_156335911_156335988_156337878_156338075_156338592_156338688_156341880_156342062_156344378_156344498_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUSG00000046873.19_1	chrX	-	3880	6	FSM	ENSMUSG00000046873.19	ENSMUST00000179062.8	3890	6	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATGAGATTGTTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	156381644	156348950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156352095_156355854_156355983_156359079_156359184_156374349_156374552_156376720_156376870_156381491
ENSMUSG00000046876.17_0	chr13	-	10549	8	FSM	ENSMUSG00000046876.17	ENSMUST00000091628.11	10569	8	11	9	-8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGCAAACCTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	46118441	45703239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_45711062_45720048_45722057_45851296_45851422_45888590_45888655_45948984_45949114_46005803_46005933_46109930_46110052_46118290
ENSMUSG00000046879.8_0	chr11	-	2248	3	FSM	ENSMUSG00000046879.8	ENSMUST00000049519.4	2259	3	6	5	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCCTTTGTATTATC	NA	NA	NA	NA	NA	NA	NA	NA	48762195	48756076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48757831_48759388_48759608_48761920
ENSMUSG00000046879.8_1	chr11	-	2076	2	FSM	ENSMUSG00000046879.8	ENSMUST00000097271.4	2082	2	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGCCTTTGTATTATC	NA	NA	NA	NA	NA	NA	NA	NA	48762242	48756076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48757831_48761920
ENSMUSG00000046881.8_0	chr8	+	8710	2	FSM	ENSMUSG00000046881.8	ENSMUST00000210435.4	8718	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCCAACTTGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	72860891	72871991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72861015_72863404
ENSMUSG00000046897.18_2	chr15	+	1807	7	FSM	ENSMUSG00000046897.18	ENST00000416904.5	1825	7	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAACCCAGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102112134	102121938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116797_102117187_102117312_102117589_102117709_102121030
ENSMUSG00000046897.18_3	chr15	+	1821	7	NNC	ENSMUSG00000046897.18	novel	1825	7	NA	NA	4	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTAGAACCCAGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	102112124	102121938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_+_102112238_102113005_102113319_102116205_102116356_102116706_102116801_102117187_102117312_102117589_102117709_102121030
ENSMUSG00000046909.10_0	chr11	-	1297	4	FSM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGCCTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	80032993	80027507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80028106_80028743_80028894_80030691_80031150_80032902
ENSMUSG00000046909.10_1	chr11	-	1208	3	ISM	ENSMUSG00000046909.10	ENSMUST00000050207.10	1309	4	1850	4	1850	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATTCTGTGCCTTCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	80031151	80027507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_80028106_80028743_80028894_80030691
ENSMUSG00000046947.13_1	chr6	+	3534	8	FSM	ENSMUSG00000046947.13	ENSMUST00000140364.8	3542	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACATCCCCTTTTGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	39550814	39565703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_39552141_39553296_39553444_39556596_39556726_39557929_39558026_39560744_39560997_39562660_39562790_39563774_39563829_39564302
ENSMUSG00000046949.17_0	chr13	+	940	6	FSM	ENSMUSG00000046949.17	ENSMUST00000220844.2	957	6	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCAGCTTGTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	34148679	34169622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34148784_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUSG00000046949.17_1	chr13	+	3829	7	FSM	ENSMUSG00000046949.17	ENSMUST00000058978.9	3842	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATCATTCCTCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	34148676	34172420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34148784_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUSG00000046949.17_4	chr13	+	1053	8	FSM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	3	7	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCAGCTTGTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	34148736	34169622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34148784_34150027_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUSG00000046949.17_6	chr13	+	1002	7	ISM	ENSMUSG00000046949.17	ENSMUST00000021843.13	1063	8	1298	7	-1104	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCAGCTTGTTGCACT	NA	NA	NA	NA	NA	NA	NA	NA	34150031	34169622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_34150110_34152172_34152261_34156294_34156460_34163514_34163646_34165407_34165522_34166430_34166533_34169298
ENSMUSG00000046959.17_0	chr5	-	2985	3	FSM	ENSMUSG00000046959.17	ENSMUST00000163328.8	3015	3	27	3	27	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TCTAAAAAAAAACAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	108822592	108818418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108820607_108821296_108821915_108822413
ENSMUSG00000046961.9_0	chr16	+	3629	10	FSM	ENSMUSG00000046961.9	ENST00000464295.6	3643	10	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAAGATCTAAGTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	37767891	37827388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807955_37808879_37808976_37812361_37812599_37818238_37818398_37824876_37826946_37827114
ENSMUSG00000046961.9_7	chr16	+	2417	9	FSM	ENSMUSG00000046961.9	ENST00000461057.1	2430	9	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCAGCACCATGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	37768079	37826207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_37768182_37768576_37768714_37799020_37799151_37799367_37799479_37807828_37807943_37808879_37808976_37812361_37812599_37818238_37818398_37824876
ENSMUSG00000046962.17_0	chr16	-	5981	3	FSM	ENSMUSG00000046962.17	ENSMUST00000113734.9	6010	3	18	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGCAAACTTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	97763803	97748645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_97754294_97757957_97758101_97763613
ENSMUSG00000046962.17_1	chr16	-	5442	2	FSM	ENSMUSG00000046962.17	ENSMUST00000063605.15	5463	2	11	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACATTTATAATGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	97763804	97749042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_97754294_97763613
ENSMUSG00000046962.17_2	chr16	-	3054	4	FSM	ENSMUSG00000046962.17	ENSMUST00000052089.9	3072	4	13	5	-3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGTTTGGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	97763796	97750965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_97752070_97752669_97754294_97757957_97758101_97763613
ENSMUSG00000046982.12_0	chr18	-	5630	2	FSM	ENSMUSG00000046982.12	ENSMUST00000060303.10	5656	2	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGATTGTCGTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	84104510	84029758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84034367_84103488
ENSMUSG00000046982.12_1	chr18	-	4531	2	FSM	ENSMUSG00000046982.12	ENSMUST00000175783.3	4597	2	25	41	-22	-41	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84104551	84030247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84034367_84104139
ENSMUSG00000046985.12_0	chr5	-	3501	14	FSM	ENSMUSG00000046985.12	ENSMUST00000055128.12	3513	14	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTCACTGAATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	44383962	44332505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_44334525_44336202_44336364_44340039_44340117_44341922_44341992_44342296_44342357_44343573_44343684_44345960_44346042_44349422_44349493_44349708_44349807_44350528_44350665_44351589_44351753_44361551_44361671_44375445_44375577_44383755
ENSMUSG00000046994.10_0	chr1	+	11276	1	FSM	ENSMUSG00000046994.10	ENSMUST00000061334.10	11294	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCAAAGATGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	55276346	55287622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55276300_55287600
ENSMUSG00000046997.6_0	chr9	-	2701	3	FSM	ENSMUSG00000046997.6	ENSMUST00000055433.5	2720	3	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTGTGTAAAGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96900878	96825535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96826758_96877627_96878475_96900246
ENSMUSG00000047003.16_0	chr15	+	3524	3	FSM	ENSMUSG00000047003.16	ENSMUST00000161785.8	3540	3	9	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGCTTCCTGTGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	75488536	75497142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75488670_75489892_75491541_75495399
ENSMUSG00000047003.16_1	chr15	+	8246	3	FSM	ENSMUSG00000047003.16	ENSMUST00000054555.10	8270	3	1	23	1	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTGATATAAAAAAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75488533	75501653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75488878_75489892_75491541_75495399
ENSMUSG00000047021.15_0	chr1	-	1852	9	ISM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	1093	1	1093	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGACTGAAACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	74971180	74963943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_74964312_74964531_74964733_74965589_74965856_74966172_74966396_74966755_74966902_74967163_74967364_74967492_74967660_74968413_74968517_74971002
ENSMUSG00000047021.15_1	chr1	-	1910	10	FSM	ENSMUSG00000047021.15	ENST00000409865.7	1911	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGACTGAAACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	74972273	74963943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74964312_74964531_74964733_74965589_74965856_74966172_74966396_74966755_74966902_74967163_74967364_74967492_74967660_74968413_74968517_74971002_74971188_74972222
ENSMUSG00000047021.15_5	chr1	-	238	1	NIC	ENSMUSG00000047021.15	novel	5727	33	NA	NA	1094	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACAAAACAACC	NA	NA	NA	NA	NA	NA	NA	NA	74971179	74970941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_74970900_74971200
ENSMUSG00000047021.15_6	chr1	-	297	2	FSM	ENSMUSG00000047021.15	ENST00000295729.6	315	2	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAACAAAACAACC	NA	NA	NA	NA	NA	NA	NA	NA	74972273	74970941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74971188_74972222
ENSMUSG00000047022.19_0	chr12	+	1394	10	FSM	ENSMUSG00000047022.19	ENSMUST00000145003.8	1424	10	24	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAGAAAAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57277255	57504012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738
ENSMUSG00000047022.19_1	chr12	+	2075	11	FSM	ENSMUSG00000047022.19	ENSMUST00000123498.8	2117	11	29	13	29	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTATACATAAATATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57277260	57543972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_57277398_57350130_57350338_57352796_57352924_57354144_57354251_57372309_57372440_57378781_57378816_57379074_57379246_57410912_57411021_57461101_57461197_57503738_57503970_57543243
ENSMUSG00000047030.16_0	chr2	-	3981	3	FSM	ENSMUSG00000047030.16	ENSMUST00000057627.16	4012	3	25	6	-17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAGCTAGCCGAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	167334782	167323058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167326500_167327077_167327514_167334678
ENSMUSG00000047036.9_2	chr9	-	3116	6	FSM	ENSMUSG00000047036.9	ENST00000396077.8	3128	6	11	1	-4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCTTGGTGTGGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	122691197	122680863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122683054_122683771_122683883_122685763_122685891_122686131_122686227_122686534_122686704_122690773
ENSMUSG00000047036.9_4	chr9	-	815	4	FSM	ENSMUSG00000047036.9	ENST00000617032.1	832	4	13	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCAGTATCCCCAGC	NA	NA	NA	NA	NA	NA	NA	NA	122691195	122685761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122685891_122686131_122686227_122686534_122686704_122690773
ENSMUSG00000047037.6_0	chr7	-	3158	5	FSM	ENSMUSG00000047037.6	ENSMUST00000052204.6	3183	5	25	0	25	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACCCAAATAATAGTT	NA	NA	NA	NA	NA	NA	NA	NA	55669677	55627314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_55629652_55635151_55635313_55646181_55646273_55647263_55647312_55669156
ENSMUSG00000047044.8_0	chr19	+	1667	2	FSM	ENSMUSG00000047044.8	ENSMUST00000062753.3	1677	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	18690566	18695792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_18691024_18694582
ENSMUSG00000047044.8_1	chr19	+	1624	2	FSM	ENSMUSG00000047044.8	ENSMUST00000055792.8	1631	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGTATCAGTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	18690606	18695792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_18691024_18694585
ENSMUSG00000047045.18_0	chrX	+	1735	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112889.8	1742	7	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCATACAAAGAATAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	141464404	141626486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141464553_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180_141617390_141625405
ENSMUSG00000047045.18_1	chrX	+	4425	5	FSM	ENSMUSG00000047045.18	ENSMUST00000101198.9	4443	5	12	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTTAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141464422	141621228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141464553_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUSG00000047045.18_2	chrX	+	5130	7	FSM	ENSMUSG00000047045.18	ENSMUST00000087333.9	5149	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTTAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141464426	141621228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141464553_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUSG00000047045.18_3	chrX	+	5210	7	FSM	ENSMUSG00000047045.18	ENSMUST00000112896.9	5224	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTTAGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	141464729	141621228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_141464936_141465286_141465946_141535035_141535086_141553962_141554030_141588985_141589065_141615496_141615598_141617180
ENSMUSG00000047067.8_0	chr1	+	1291	2	FSM	ENSMUSG00000047067.8	ENSMUST00000060913.8	1314	2	4	19	4	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATAAGTGAATAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	92834706	92836138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_92835146_92835286
ENSMUSG00000047084.9_0	chr7	+	1290	3	FSM	ENSMUSG00000047084.9	ENSMUST00000117989.2	1317	3	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGCAGTTTGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	79910980	79915113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79911172_79911568_79911680_79914125
ENSMUSG00000047090.14_0	chr10	-	2318	5	FSM	ENSMUSG00000047090.14	ENSMUST00000051011.14	2335	5	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACCTGGGGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	128640230	128635912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128637099_128637219_128637381_128637804_128638387_128638966_128639227_128640101
ENSMUSG00000047090.14_1	chr10	-	959	2	FSM	ENSMUSG00000047090.14	ENST00000482378.6	972	2	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACTCTGAAACAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128638382	128636717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128637099_128637804
ENSMUSG00000047098.19_0	chr14	+	3481	21	FSM	ENSMUSG00000047098.19	ENSMUST00000019443.15	3485	21	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTCAGCATCCCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	55829168	55841150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55829530_55829625_55829773_55829917_55830074_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047098.19_1	chr14	+	3131	20	FSM	ENSMUSG00000047098.19	ENST00000559275.5	3150	20	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATGGCCTAGGCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	55829637	55841115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55829773_55829917_55830132_55830289_55830350_55830462_55830533_55831751_55831930_55832379_55832759_55832926_55833218_55833463_55833713_55833798_55833985_55834108_55834316_55836094_55836269_55836360_55836460_55836552_55836643_55838505_55838621_55838735_55838855_55839098_55839213_55839337_55839396_55840059_55840157_55840712_55840882_55840988
ENSMUSG00000047115.16_0	chr6	+	1276	6	FSM	ENSMUSG00000047115.16	ENSMUST00000121903.2	1304	6	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAATACATAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	49344777	49366207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49344908_49349501_49349676_49353037_49353229_49355329_49355537_49359896_49360014_49365750
ENSMUSG00000047115.16_17	chr6	+	582	4	ISM	ENSMUSG00000047115.16	ENST00000344962.9	765	5	3537	8	3537	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGGGTAAGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	49353036	49362381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_49353229_49355329_49355537_49359896_49360005_49362306
ENSMUSG00000047115.16_3	chr6	+	660	5	FSM	ENSMUSG00000047115.16	ENST00000409653.5	673	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGGGTAAGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	49344828	49362381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49344908_49353037_49353229_49355329_49355537_49359896_49360005_49362306
ENSMUSG00000047115.16_9	chr6	+	751	5	FSM	ENSMUSG00000047115.16	ENST00000344962.9	765	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGAGGGTAAGTATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	49349505	49362381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49349676_49353037_49353229_49355329_49355537_49359896_49360005_49362306
ENSMUSG00000047123.9_0	chr17	-	2983	2	FSM	ENSMUSG00000047123.9	ENSMUST00000058136.9	2992	2	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGTCAGTTTAGGCTACG	NA	NA	NA	NA	NA	NA	NA	NA	56583782	56576323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56579218_56583693
ENSMUSG00000047123.9_1	chr17	-	2898	1	ISM	ENSMUSG00000047123.9	ENSMUST00000058136.9	2992	2	4570	0	4570	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTTAGGCTACGGCACT	NA	NA	NA	NA	NA	NA	NA	NA	56579216	56576318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_56576300_56579200
ENSMUSG00000047126.18_0	chr11	-	6506	32	FSM	ENSMUSG00000047126.18	ENSMUST00000103186.11	6519	32	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATCATGGTATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	86648383	86585181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627896_86628105_86648073
ENSMUSG00000047126.18_12	chr11	-	6149	32	FSM	ENSMUSG00000047126.18	ENSMUST00000060766.16	6163	32	10	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAACATGTAGAATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	86648317	86585484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596957_86597492_86597686_86597877_86598062_86598295_86598442_86599775_86599899_86602166_86602402_86602672_86602816_86603406_86603533_86608723_86608888_86610011_86610193_86610284_86610450_86611075_86611214_86612400_86612524_86613000_86613154_86615896_86616098_86617080_86617279_86621036_86621211_86621543_86621658_86623330_86623493_86624401_86624671_86627884_86628105_86648073
ENSMUSG00000047126.18_23	chr11	-	2273	14	FSM	ENSMUSG00000047126.18	ENST00000579456.5	2287	14	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGAAGAACTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	86648310	86586152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86586517_86588090_86588167_86593034_86593257_86593426_86593598_86594489_86594601_86594696_86594829_86594905_86595056_86595465_86595634_86595713_86595822_86595971_86596137_86596798_86596910_86624620_86624671_86627896_86628105_86648073
ENSMUSG00000047139.10_0	chr10	+	578	2	FSM	ENSMUSG00000047139.10	ENST00000620405.1	590	2	12	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTGAACGTTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	43455175	43459322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43455319_43458887
ENSMUSG00000047139.10_1	chr10	+	1810	2	FSM	ENSMUSG00000047139.10	ENSMUST00000058714.10	1816	2	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAGCAGTCTGTTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	43455167	43460258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_43455319_43458599
ENSMUSG00000047141.6_0	chr16	-	4713	2	FSM	ENSMUSG00000047141.6	ENSMUST00000052588.5	4741	2	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGCAAGTGTTCAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	64606656	64600713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_64603640_64604869
ENSMUSG00000047143.4_0	chr4	+	2909	3	FSM	ENSMUSG00000047143.4	ENSMUST00000061187.4	2922	3	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTAAATAAAGTAACGC	NA	NA	NA	NA	NA	NA	NA	NA	109835249	109840871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_109835534_109837051_109837607_109838801
ENSMUSG00000047146.18_0	chr10	-	14338	13	FSM	ENSMUSG00000047146.18	ENSMUST00000174189.2	14369	13	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTTCTATTTTGCACCTG	NA	NA	NA	NA	NA	NA	NA	NA	62734875	62640364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_62649192_62649356_62649604_62650214_62650353_62652162_62652253_62654717_62654814_62655251_62655403_62658327_62658540_62668672_62668767_62669316_62669408_62673954_62676158_62700586_62700641_62713930_62715913_62734722
ENSMUSG00000047153.5_0	chr14	+	3888	8	FSM	ENSMUSG00000047153.5	ENSMUST00000022831.5	3898	8	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTAGGATTGGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	56122407	56134232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56122600_56123230_56123449_56123948_56125076_56125170_56125302_56125377_56125475_56131448_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_1	chr14	+	744	5	FSM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAGCACCAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	56125242	56132693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56125302_56125377_56125475_56131444_56131557_56131743_56131846_56132319
ENSMUSG00000047153.5_6	chr14	+	683	4	ISM	ENSMUSG00000047153.5	ENST00000554268.1	753	5	137	9	137	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGGAAGCACCAGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	56125379	56132693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_56125475_56131444_56131557_56131743_56131846_56132319
ENSMUSG00000047181.13_0	chr11	+	3300	10	FSM	ENSMUSG00000047181.13	ENSMUST00000055947.10	3318	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACCAGTGATCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	94900714	94916905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94901403_94905177_94905233_94910186_94910354_94910755_94911045_94912023_94912112_94912211_94912287_94912374_94912535_94914084_94914205_94914285_94914442_94915403
ENSMUSG00000047182.7_0	chr5	-	2321	2	FSM	ENSMUSG00000047182.7	ENSMUST00000057314.4	2337	2	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTCTTGCTCAATGGATC	NA	NA	NA	NA	NA	NA	NA	NA	137643960	137641293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137643007_137643352
ENSMUSG00000047187.10_0	chr4	+	2120	8	FSM	ENSMUSG00000047187.10	ENSMUST00000060232.8	2133	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCGTACTGTAATGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	8535652	8607774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_8535909_8561151_8561224_8572525_8572594_8577954_8578038_8578470_8578564_8582381_8582494_8604373_8604443_8606407
ENSMUSG00000047193.17_0	chr9	-	13945	89	FSM	ENSMUSG00000047193.17	ENSMUST00000048417.13	13972	89	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATTAATACTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7177030	6928513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7168573_7168677_7168813_7169476_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241_7175413_7176762
ENSMUSG00000047193.17_13	chr9	-	12716	88	FSM	ENSMUSG00000047193.17	ENST00000650373.2	12743	88	15	12	15	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCAGTAGGTCTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	7175398	6929476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044446_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101183_7101487_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7168573_7168677_7168813_7169476_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241
ENSMUSG00000047193.17_2	chr9	-	14254	90	FSM	ENSMUSG00000047193.17	ENSMUST00000140466.8	14264	90	1	9	1	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATACTCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7184445	6928511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_6929624_6935238_6935356_6940542_6940625_6941594_6941705_6955906_6955997_6967079_6967290_6983389_6983507_6992523_6992629_6993937_6994147_6996863_6996940_7001340_7001497_7002555_7002667_7005489_7005616_7006715_7006877_7009970_7010044_7011172_7011305_7014138_7014217_7015473_7015525_7016729_7016796_7023310_7023401_7031640_7031785_7034989_7035125_7035599_7035720_7037652_7037817_7041601_7041726_7044329_7044429_7049082_7049193_7050341_7050484_7051369_7051497_7052560_7052648_7071007_7071130_7071800_7071925_7075761_7075923_7076212_7076327_7077871_7078010_7081003_7081159_7083156_7083239_7084933_7085077_7101073_7101188_7101491_7101601_7102310_7102560_7103654_7103786_7111424_7111593_7112047_7112151_7113085_7113231_7114864_7115017_7116393_7116641_7117394_7117655_7118830_7118987_7120808_7120939_7122607_7122816_7124731_7124997_7125730_7125931_7128157_7128274_7128955_7129180_7129662_7129846_7130693_7130877_7131837_7132044_7134243_7134395_7135018_7135139_7136997_7137111_7139160_7139279_7139373_7139507_7140898_7141282_7142199_7142371_7142649_7142765_7142856_7143013_7144137_7144344_7145548_7145699_7147682_7147811_7148624_7148741_7155080_7155209_7157551_7157781_7157892_7158033_7158828_7158928_7159480_7159634_7160153_7160250_7162730_7162927_7165598_7165775_7167116_7167242_7168253_7168366_7168458_7168573_7168677_7168813_7169476_7169710_7170861_7171007_7172802_7172922_7174739_7174876_7175241_7175413_7176762_7177231_7184338
ENSMUSG00000047205.13_0	chr11	+	4625	2	FSM	ENSMUSG00000047205.13	ENSMUST00000055931.5	4632	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTCTCATCCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	3845246	3851296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3845518_3846942
ENSMUSG00000047205.13_1	chr11	+	2637	2	FSM	ENSMUSG00000047205.13	ENSMUST00000109996.8	2685	2	16	32	16	-32	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAATAAATCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	3845255	3849321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3845518_3846946
ENSMUSG00000047213.15_0	chr3	+	5038	4	FSM	ENSMUSG00000047213.15	ENST00000617200.1	5051	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAATTGGTGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16237346	16271194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_16237685_16238085_16238111_16257989_16259589_16268118
ENSMUSG00000047213.15_1	chr3	+	5161	5	FSM	ENSMUSG00000047213.15	ENST00000623280.3	5176	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAATTGGTGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16237348	16271194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_16237685_16238085_16238111_16243602_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_11	chr3	+	2359	5	FSM	ENSMUSG00000047213.15	ENST00000621957.4	2373	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTTAAATTGTCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	16237464	16268553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_16237685_16238085_16238111_16243647_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_7	chr3	+	5088	5	FSM	ENSMUSG00000047213.15	ENSMUST00000108345.9	5102	5	7	7	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTAATTGGTGTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	16237382	16271194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257989_16259589_16268118
ENSMUSG00000047213.15_9	chr3	+	4916	6	FSM	ENSMUSG00000047213.15	ENSMUST00000108346.5	4929	6	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATGAAATGATTAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	16237403	16271010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_16237685_16238085_16238111_16243641_16243728_16257350_16257384_16257989_16259589_16268118
ENSMUSG00000047215.15_0	chr5	-	726	8	FSM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	8503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTGATTTGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65548784	65545715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288_65548336_65548718
ENSMUSG00000047215.15_1	chr5	-	658	7	ISM	ENSMUSG00000047215.15	ENSMUST00000057885.13	738	8	454	9	15	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATTGATTTGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	65548333	65545715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_65545785_65545904_65546023_65546413_65546495_65546820_65546954_65547730_65547827_65548081_65548198_65548288
ENSMUSG00000047220.6_0	chr9	-	2857	7	FSM	ENSMUSG00000047220.6	ENSMUST00000076592.4	2890	7	2	31	2	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108305681	108280840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588_108298761_108305614
ENSMUSG00000047220.6_1	chr9	-	2791	6	ISM	ENSMUSG00000047220.6	ENSMUST00000076592.4	2890	7	6922	31	6922	-31	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108298761	108280840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_108283054_108283809_108283914_108289691_108289780_108290161_108290211_108294520_108294685_108298588
ENSMUSG00000047221.6_0	chr5	+	3021	8	FSM	ENSMUSG00000047221.6	ENSMUST00000056045.5	3027	8	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGGTTTGTCACTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	21629959	21687120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21630575_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ENSMUSG00000047221.6_4	chr5	+	728	6	FSM	ENSMUSG00000047221.6	ENST00000443595.2	746	6	12	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGGCACTGACAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	21630306	21660851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21630579_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779
ENSMUSG00000047221.6_7	chr5	+	985	8	FSM	ENSMUSG00000047221.6	ENST00000413034.3	994	8	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGCGCGGTTTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	21630316	21685437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21630579_21634721_21634832_21638688_21638782_21643697_21643837_21652313_21652356_21660779_21660876_21664156_21664292_21685329
ENSMUSG00000047230.7_0	chrX	+	2946	2	FSM	ENSMUSG00000047230.7	ENST00000540876.1	2957	2	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTAATTGTTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	138699200	138712126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_138699295_138709274
ENSMUSG00000047230.7_7	chrX	+	2855	1	NIC	ENSMUSG00000047230.7	novel	2957	2	NA	NA	7695	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGTAATTGTTGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	138709271	138712126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_+_138709300_138712100
ENSMUSG00000047242.15_0	chrX	-	2614	7	FSM	ENSMUSG00000047242.15	ENSMUST00000055497.15	2633	7	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTAATCATTAACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	105263494	105250494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184
ENSMUSG00000047242.15_1	chrX	-	2501	8	FSM	ENSMUSG00000047242.15	ENSMUST00000113495.9	2512	8	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAACTTTAATCATTAAC	NA	NA	NA	NA	NA	NA	NA	NA	105264763	105250498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_105252264_105253312_105253424_105259732_105259803_105261702_105261838_105261915_105262053_105262501_105262584_105263184_105263305_105264682
ENSMUSG00000047248.21_1	chr7	+	1355	7	FSM	ENSMUSG00000047248.21	ENST00000539061.6	1367	7	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAAGTGTCCTTTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	100021473	100045049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_100021704_100023470_100023741_100029174_100029333_100039285_100039510_100040139_100040388_100044374_100044512_100044961
ENSMUSG00000047250.14_1	chr2	+	2852	11	FSM	ENSMUSG00000047250.14	ENSMUST00000062069.6	2867	11	12	3	12	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	4621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGCTTGCTATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	36120449	36142281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36120582_36120679_36120776_36127218_36127336_36127662_36127804_36127968_36128113_36130607_36130790_36130882_36130967_36132774_36133022_36135055_36135343_36139107_36139256_36141007
ENSMUSG00000047250.14_11	chr2	+	1625	9	FSM	ENSMUSG00000047250.14	ENST00000540753.6	1631	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGATGAAGACAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	36127226	36141401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36127336_36127662_36127804_36127968_36128113_36130607_36130790_36130882_36130967_36132774_36133022_36135055_36135232_36139107_36139256_36141007
ENSMUSG00000047260.5_0	chr11	-	1320	2	FSM	ENSMUSG00000047260.5	ENSMUST00000054952.4	1332	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACATGTTGCGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	73067857	73066350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73067578_73067764
ENSMUSG00000047260.5_1	chr11	-	1230	1	NIC	ENSMUSG00000047260.5	novel	1332	2	NA	NA	248	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACATGTTGCGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	73067580	73066350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_73066400_73067600
ENSMUSG00000047261.10_0	chr16	-	1401	3	FSM	ENSMUSG00000047261.10	ENSMUST00000102817.5	1420	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTAATCAAGTTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	42161006	42068815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_42069478_42112161_42112730_42160835
ENSMUSG00000047264.9_0	chr8	+	1988	2	FSM	ENSMUSG00000047264.9	ENSMUST00000061508.8	1999	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3543148	3547208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3543310_3545381
ENSMUSG00000047264.9_1	chr8	+	2200	1	FSM	ENSMUSG00000047264.9	ENSMUST00000208423.2	2200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTTGTTACTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	3545008	3547208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3545000_3547200
ENSMUSG00000047284.15_0	chr11	+	5183	29	FSM	ENSMUSG00000047284.15	ENSMUST00000061837.11	5188	29	1	4	1	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCATCTGCCTCCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	69792717	69804642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69793012_69793833_69794279_69794479_69794546_69794690_69794990_69795158_69795271_69795359_69795449_69796356_69796430_69796546_69796812_69797051_69797234_69797343_69797430_69797551_69797715_69797809_69798009_69798089_69798167_69798249_69798329_69798662_69798839_69798921_69799054_69799284_69799431_69799503_69799729_69799819_69799919_69800042_69800205_69800373_69800539_69801086_69801246_69801560_69801741_69801851_69801940_69802043_69802152_69802269_69802415_69802567_69802681_69802754_69802921_69803952
ENSMUSG00000047342.18_0	chr11	-	651	3	FSM	ENSMUSG00000047342.18	ENST00000472486.5	669	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCGTTCGGTACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	62675801	62671321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62671786_62674497_62674588_62675704
ENSMUSG00000047344.10_0	chrX	+	3971	5	FSM	ENSMUSG00000047344.10	ENSMUST00000069763.3	3991	5	3	17	3	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCATCAGAAACAAAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	9066143	9134307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_9067042_9114277_9114402_9117460_9117659_9124184_9124393_9131764
ENSMUSG00000047368.5_0	chr19	+	2231	4	FSM	ENSMUSG00000047368.5	ENSMUST00000235332.2	2249	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAGAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	21630559	21662766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21630958_21655716_21656187_21658353_21658412_21661461
ENSMUSG00000047368.5_1	chr19	+	2244	4	FSM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTACCACTCGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	21630894	21662992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21630958_21655716_21656187_21658231_21658412_21661461
ENSMUSG00000047368.5_2	chr19	+	2167	3	ISM	ENSMUSG00000047368.5	ENSMUST00000052556.5	2259	4	24834	17	24834	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAACAAATGTACCACT	NA	NA	NA	NA	NA	NA	NA	NA	21655722	21662984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_21656187_21658231_21658412_21661461
ENSMUSG00000047371.8_0	chr7	-	2220	3	FSM	ENSMUSG00000047371.8	ENST00000380412.7	2231	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTCGTCCTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	126944551	126941968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126943643_126943723_126944039_126944320
ENSMUSG00000047371.8_1	chr7	-	2336	2	FSM	ENSMUSG00000047371.8	ENSMUST00000060783.7	2356	2	18	2	-17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTCGTCCTTAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	126944577	126941968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126944048_126944320
ENSMUSG00000047379.8_0	chr19	+	2213	1	FSM	ENSMUSG00000047379.8	ENSMUST00000235776.2	2224	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCACAGCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5088939	5091152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5088900_5091200
ENSMUSG00000047388.11_0	chr8	+	4863	4	FSM	ENSMUSG00000047388.11	ENSMUST00000109099.4	4877	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTACCTTTCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	117670138	117687177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_117670490_117679612_117679739_117681452_117681653_117682991
ENSMUSG00000047388.11_1	chr8	+	2475	4	FSM	ENSMUSG00000047388.11	ENST00000564241.5	2482	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAAGTTTTTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	117679617	117687007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_117679739_117681452_117681653_117682991_117684957_117686818
ENSMUSG00000047394.10_0	chr15	-	493	4	FSM	ENSMUSG00000047394.10	ENST00000403326.5	503	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGTGGTCTGGAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	89263402	89261939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89262076_89262302_89262425_89262537_89262643_89263272
ENSMUSG00000047407.18_0	chr17	-	1615	3	FSM	ENSMUSG00000047407.18	ENSMUST00000059775.15	1631	3	9	7	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1017	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCAATGAAGAGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	71158193	71151206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71152268_71153166_71153394_71157866
ENSMUSG00000047409.14_0	chr9	+	4578	8	FSM	ENSMUSG00000047409.14	ENSMUST00000073109.12	4589	8	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTGAATGTGCCGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	118755527	118873062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_118756009_118840302_118840458_118849079_118849113_118856004_118856107_118859263_118859321_118862603_118862697_118866428_118866615_118869591
ENSMUSG00000047412.17_0	chr9	+	3115	6	FSM	ENSMUSG00000047412.17	ENSMUST00000216649.2	3157	6	33	9	31	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCACGAGTAATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	30941972	30981520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975528_30975639_30977954_30978039_30980040
ENSMUSG00000047412.17_1	chr9	+	8849	6	FSM	ENSMUSG00000047412.17	ENSMUST00000115222.10	8861	6	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATAAGTCTGCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30941944	30987172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_30942255_30964535_30965610_30973336_30973422_30975474_30975639_30977954_30978039_30980040
ENSMUSG00000047414.7_0	chr12	+	7075	2	FSM	ENSMUSG00000047414.7	ENSMUST00000057324.4	7099	2	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAGAAAACCTATT	NA	NA	NA	NA	NA	NA	NA	NA	95659009	95751975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_95659390_95745280
ENSMUSG00000047414.7_1	chr12	+	3222	2	FSM	ENSMUSG00000047414.7	ENST00000554746.1	3241	2	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGATAAGTTAGGCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	95659143	95748235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_95659411_95745280
ENSMUSG00000047414.7_2	chr12	+	3204	2	FSM	ENSMUSG00000047414.7	ENSMUST00000110117.2	3223	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTAAAAAAAAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	95662143	95747875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_95662753_95745280
ENSMUSG00000047417.19_0	chr10	-	5236	15	FSM	ENSMUSG00000047417.19	ENSMUST00000057910.16	5250	15	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTATTCACAAAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	80397386	80376764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80378316_80378398_80378659_80378741_80378858_80379134_80379246_80379480_80379555_80379836_80379951_80380116_80380255_80380593_80380708_80381296_80381421_80381709_80381842_80382135_80382300_80383606_80383821_80384265_80384368_80385166_80386900_80397097
ENSMUSG00000047420.9_0	chr6	-	1582	3	FSM	ENSMUSG00000047420.9	ENSMUST00000051176.9	1606	3	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAACTCCCAGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	35303057	35289607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_35290805_35292227_35292329_35302773
ENSMUSG00000047423.11_0	chr19	+	1522	2	FSM	ENSMUSG00000047423.11	ENSMUST00000159759.3	1528	2	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACTGTCCTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	5475176	5477340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5475337_5475978
ENSMUSG00000047423.11_1	chr19	+	1520	2	FSM	ENSMUSG00000047423.11	ENSMUST00000054477.8	1529	2	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACACTGTCCTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	5475192	5477340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5475337_5475964
ENSMUSG00000047428.15_0	chr17	+	1497	6	FSM	ENSMUSG00000047428.15	ENSMUST00000061722.13	1532	6	23	12	23	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAATGCAAGTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46608369	46614185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46608447_46609438_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
ENSMUSG00000047428.15_1	chr17	+	1500	6	FSM	ENSMUSG00000047428.15	ENSMUST00000166617.8	1528	6	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAATGCAAGTGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	46608869	46614185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46609005_46609493_46609625_46609873_46609938_46611876_46612008_46612569_46612715_46613291
ENSMUSG00000047434.15_0	chr16	-	3458	4	FSM	ENSMUSG00000047434.15	ENSMUST00000055389.9	3470	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTACAGTGTCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	30900241	30773964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30776553_30826531_30826665_30869449_30869598_30899652
ENSMUSG00000047443.15_0	chr1	+	2802	8	FSM	ENSMUSG00000047443.15	ENSMUST00000086861.12	2815	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGGCATTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	91294160	91301935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_91294371_91296086_91296204_91297092_91297196_91297807_91298065_91298136_91298246_91298346_91298438_91299103_91299183_91300099
ENSMUSG00000047446.19_0	chr12	-	1184	2	FSM	ENSMUSG00000047446.19	ENSMUST00000101472.4	1200	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTGTATGCCCTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	40088016	40085828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40086833_40087836
ENSMUSG00000047454.13_0	chr12	+	3552	24	FSM	ENSMUSG00000047454.13	ENSMUST00000052472.6	3570	24	6	12	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTAAAAATGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	78273158	78731534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78569671_78569729_78579430_78579473_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUSG00000047454.13_1	chr12	+	1492	11	FSM	ENSMUSG00000047454.13	ENST00000459628.5	1511	11	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTCTTGGTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78273166	78637453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78481947_78481987_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307
ENSMUSG00000047454.13_3	chr12	+	3287	23	FSM	ENSMUSG00000047454.13	ENSMUST00000110388.10	3300	23	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTAAAAATGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	78273432	78731534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78501530_78501626_78528072_78528140_78538811_78539085_78540723_78540832_78551390_78551526_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUSG00000047454.13_5	chr12	+	2442	25	FSM	ENSMUSG00000047454.13	ENST00000543237.5	2456	25	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTTCTGATCTGGATAA	NA	NA	NA	NA	NA	NA	NA	NA	78273535	78730762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_78273616_78390125_78390205_78423133_78423192_78459114_78459208_78481947_78481987_78501530_78501626_78528072_78528140_78538811_78539085_78551390_78551526_78569671_78569729_78579430_78579473_78609629_78609673_78637307_78637446_78655918_78656012_78659745_78659802_78670077_78670198_78672907_78672967_78673880_78674035_78684231_78684354_78701580_78701669_78711264_78711339_78716597_78716663_78727064_78727169_78729491_78729589_78730551
ENSMUSG00000047459.15_0	chr2	+	678	4	FSM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTGTCTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	155078458	155092195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155078538_155084650_155084727_155089690_155089859_155091840
ENSMUSG00000047459.15_3	chr2	+	600	3	ISM	ENSMUSG00000047459.15	ENSMUST00000109682.9	684	4	6195	2	6122	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTTGTGTCTTTACTA	NA	NA	NA	NA	NA	NA	NA	NA	155084649	155092195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_155084727_155089690_155089859_155091840
ENSMUSG00000047466.11_0	chr18	-	5102	5	FSM	ENSMUSG00000047466.11	ENSMUST00000074653.6	5125	5	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAACAGTGACTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	77801614	77719196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77723025_77730763_77730891_77740824_77740993_77761595_77762381_77801420
ENSMUSG00000047473.15_0	chr7	+	3540	5	FSM	ENSMUSG00000047473.15	ENSMUST00000032803.12	3558	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTAGTGATGTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	29483434	29494121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29484327_29485643_29485729_29487473_29487601_29488762_29488862_29491784
ENSMUSG00000047473.15_1	chr7	+	3547	5	NIC	ENSMUSG00000047473.15	novel	3558	5	NA	NA	8	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATGTTAAACATGAATT	NA	NA	NA	NA	NA	NA	NA	NA	29483430	29494127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_29484327_29485643_29485729_29487473_29487601_29488765_29488862_29491784
ENSMUSG00000047473.15_3	chr7	+	3317	4	FSM	ENSMUSG00000047473.15	ENSMUST00000122387.2	3342	4	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGTAGTGATGTTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	29483527	29494121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29484327_29485643_29485729_29488765_29488862_29491784
ENSMUSG00000047507.13_0	chr17	-	3771	33	FSM	ENSMUSG00000047507.13	ENST00000397488.6	3785	33	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGCCCCCACCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	25471102	25462342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25462716_25462795_25463002_25463079_25463204_25463282_25463404_25463484_25463566_25463726_25463799_25464110_25464220_25464289_25464370_25464455_25464525_25464612_25464805_25464907_25465001_25465086_25465231_25465303_25465428_25465531_25465663_25465777_25465830_25465931_25466030_25466110_25466168_25466283_25466375_25466457_25466583_25467000_25467122_25467244_25467349_25467445_25467542_25467629_25467738_25468061_25468165_25468288_25468367_25468488_25468534_25469056_25469253_25469366_25469434_25469569_25469630_25470074_25470183_25470411_25470549_25470705_25470794_25470984
ENSMUSG00000047514.7_0	chr10	+	3065	1	FSM	ENSMUSG00000047514.7	ENSMUST00000061372.7	3086	1	16	5	16	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAAAATATTTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34158201	34161266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_34158200_34161300
ENSMUSG00000047518.4_0	chr4	+	1249	3	FSM	ENSMUSG00000047518.4	ENST00000372613.6	1262	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACATAAGATGTGGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	120390189	120393716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_120390786_120392141_120392673_120393594
ENSMUSG00000047528.14_0	chr1	-	1481	14	FSM	ENSMUSG00000047528.14	ENSMUST00000191565.7	1489	14	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAGAACTGGTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	58731598	58697283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58697594_58698154_58698265_58698381_58698472_58700558_58700622_58705985_58706090_58706887_58706988_58708586_58708640_58709528_58709627_58715687_58715750_58717444_58717539_58719022_58719157_58730071_58730118_58730863_58730942_58731459
ENSMUSG00000047534.18_0	chr12	-	3999	14	FSM	ENSMUSG00000047534.18	ENSMUST00000052201.9	4017	14	14	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATATTTGTTTCTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65219340	65179511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_65180400_65180577_65180633_65183523_65183624_65185418_65185571_65187506_65187665_65189996_65190167_65195495_65196325_65199461_65199605_65200579_65200668_65201492_65201624_65203765_65203840_65205168_65205636_65208176_65208803_65219222
ENSMUSG00000047539.10_0	chr1	-	4907	5	FSM	ENSMUSG00000047539.10	ENSMUST00000051431.10	4925	5	12	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTGGAGTTTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	182169171	182140672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182144851_182145374_182145571_182153818_182153958_182157438_182157549_182168887
ENSMUSG00000047539.10_3	chr1	-	1286	4	FSM	ENSMUSG00000047539.10	ENST00000424254.6	1312	4	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTTGAAAGAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	182169160	182144086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_182144851_182153818_182153958_182157438_182157549_182168887
ENSMUSG00000047547.15_0	chr13	-	2166	5	FSM	ENSMUSG00000047547.15	ENSMUST00000091609.11	2186	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1593	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCCCACCTTAAAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	54759144	54740220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_54741856_54746534_54746647_54746856_54746975_54754456_54754504_54758890
ENSMUSG00000047554.15_0	chr7	-	3819	7	FSM	ENSMUSG00000047554.15	ENSMUST00000094097.12	3840	7	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCGAAGATAATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	109585644	109571400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168
ENSMUSG00000047554.15_5	chr7	-	2739	9	FSM	ENSMUSG00000047554.15	ENSMUST00000118429.8	2774	9	23	12	23	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACTGATCAATATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	109586113	109572703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_109574159_109575801_109575941_109577916_109578022_109578595_109578690_109580195_109580325_109581862_109581981_109585168_109585453_109585573_109585800_109585924
ENSMUSG00000047557.3_0	chr3	-	1096	6	FSM	ENSMUSG00000047557.3	ENSMUST00000058981.3	1112	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCACGGAGTCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	67371250	67365337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_67365661_67365926_67365990_67368254_67368392_67368644_67368823_67369691_67369755_67370918
ENSMUSG00000047562.4_0	chr9	+	1713	10	FSM	ENSMUSG00000047562.4	ENSMUST00000034488.4	1722	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGAACCATTCCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	7502352	7510232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7502500_7503146_7503392_7503481_7503631_7504061_7504188_7504832_7504998_7505527_7505670_7506457_7506592_7507247_7507408_7508101_7508206_7509891
ENSMUSG00000047583.10_0	chr3	-	4458	6	FSM	ENSMUSG00000047583.10	ENSMUST00000052774.8	4490	6	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTTTATTATAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	154302709	154282076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_154285929_154293113_154293248_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ENSMUSG00000047583.10_1	chr3	-	4257	5	FSM	ENSMUSG00000047583.10	ENSMUST00000170461.8	4270	5	9	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAATTTTGTCTGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154302726	154282160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_154285929_154296720_154296793_154299353_154299453_154300090_154300172_154302489
ENSMUSG00000047603.10_0	chr7	+	3346	4	FSM	ENSMUSG00000047603.10	ENSMUST00000056549.9	3373	4	18	9	18	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTAATGAGTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	23833684	23842657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23833913_23834682_23834741_23836470_23836598_23839724
ENSMUSG00000047613.11_0	chr4	+	967	3	FSM	ENSMUSG00000047613.11	ENSMUST00000105645.9	977	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTAAAGAAATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	154041696	154046368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154041780_154044987_154045450_154045946
ENSMUSG00000047613.11_1	chr4	+	1085	4	FSM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	5	8	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGAAATACTGTGTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	154041698	154046374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154041780_154044205_154044320_154044987_154045450_154045946
ENSMUSG00000047613.11_6	chr4	+	1007	3	ISM	ENSMUSG00000047613.11	ENSMUST00000058393.9	1098	4	2510	7	2510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATACTGTGTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	154044203	154046375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_154044320_154044987_154045450_154045946
ENSMUSG00000047617.12_0	chr2	-	967	7	FSM	ENSMUSG00000047617.12	ENSMUST00000114261.9	981	7	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCAGACTTGAGTTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	25351100	25349501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25349714_25349786_25349872_25350020_25350087_25350178_25350370_25350456_25350507_25350666_25350728_25350798
ENSMUSG00000047632.12_0	chr19	-	1768	2	FSM	ENSMUSG00000047632.12	ENSMUST00000057337.9	1772	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAATTCTGCTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	36897015	36894953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_36896678_36896971
ENSMUSG00000047632.12_1	chr19	-	1672	1	ISM	ENSMUSG00000047632.12	ENSMUST00000238948.2	1756	2	372	6	372	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAAATTCTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	36896627	36894955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_36895000_36896600
ENSMUSG00000047635.7_0	chr5	+	1651	3	FSM	ENSMUSG00000047635.7	ENSMUST00000077376.3	1677	3	11	15	11	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCATAGAAAACATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	124466171	124479892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124466293_124476689_124476999_124478671
ENSMUSG00000047638.16_1	chr10	-	1187	7	FSM	ENSMUSG00000047638.16	ENST00000549996.5	1202	7	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACACCAGTGGGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	89334262	89290572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89290811_89292392_89292507_89309613_89309761_89314211_89314312_89314639_89314739_89316352_89316490_89333910
ENSMUSG00000047648.14_0	chr10	+	5045	3	FSM	ENSMUSG00000047648.14	ENSMUST00000129456.8	5060	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAAGCTAATTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	11157081	11173789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_11157245_11165263_11167317_11170960
ENSMUSG00000047649.10_0	chr7	-	2215	3	FSM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAAACCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	19093396	19089952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19091942_19093014_19093157_19093312
ENSMUSG00000047649.10_1	chr7	-	2131	2	ISM	ENSMUSG00000047649.10	ENSMUST00000047036.10	2239	3	250	14	250	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACAAACCAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	19093156	19089952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_19091942_19093014
ENSMUSG00000047654.7_0	chr8	+	1333	1	FSM	ENSMUSG00000047654.7	ENSMUST00000050373.7	1335	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGGGTTAGCGGTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	70354833	70356166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70354800_70356200
ENSMUSG00000047656.10_0	chr19	+	1080	7	FSM	ENSMUSG00000047656.10	ENSMUST00000088223.7	1103	7	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCAGGATTTGTGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	6973555	6976407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6973893_6974063_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976025_6976137_6976259
ENSMUSG00000047656.10_3	chr19	+	586	5	FSM	ENSMUSG00000047656.10	ENST00000546089.5	601	5	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATTAAAAAACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	6974063	6976361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6974146_6975300_6975471_6975559_6975735_6975876_6975934_6976259
ENSMUSG00000047656.10_6	chr19	+	505	4	ISM	ENSMUSG00000047656.10	ENST00000546089.5	601	5	1239	12	1239	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATTAAAAAACCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	6975299	6976361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_6975471_6975559_6975735_6975876_6975934_6976259
ENSMUSG00000047669.9_0	chr10	+	2103	2	FSM	ENSMUSG00000047669.9	ENSMUST00000063138.8	2140	2	28	9	28	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATTATTTATAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55983040	55992967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_55983126_55990949
ENSMUSG00000047669.9_1	chr10	+	2020	1	NIC	ENSMUSG00000047669.9	novel	2140	2	NA	NA	7935	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAATTATTTATAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	55990947	55992967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_+_55990900_55993000
ENSMUSG00000047671.9_0	chr4	+	978	4	FSM	ENSMUSG00000047671.9	ENSMUST00000062206.3	990	4	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAAAAGTGGTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	116984010	116985924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116984056_116984178_116984286_116984472_116984542_116985167
ENSMUSG00000047671.9_1	chr4	+	931	3	ISM	ENSMUSG00000047671.9	ENSMUST00000062206.3	990	4	174	8	174	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTGGTCCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	116984183	116985927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_116984286_116984472_116984542_116985167
ENSMUSG00000047675.16_0	chr4	-	849	6	FSM	ENSMUSG00000047675.16	ENSMUST00000102696.5	860	6	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTTTGGAGAGGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	117013429	117011023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_117011185_117011495_117011626_117011834_117012011_117012204_117012305_117012767_117012875_117013254
ENSMUSG00000047694.13_0	chrX	+	919	8	FSM	ENSMUSG00000047694.13	ENSMUST00000113811.8	930	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTATATAAGAAACTGATA	NA	NA	NA	NA	NA	NA	NA	NA	97979921	97988726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_97979952_97981791_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUSG00000047694.13_1	chrX	+	5192	7	FSM	ENSMUSG00000047694.13	ENSMUST00000054697.7	5211	7	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAGAAAGAGATAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	97981373	97992611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_97981895_97983378_97983508_97983727_97983807_97984392_97984436_97986383_97986513_97987083_97987242_97988478
ENSMUSG00000047710.9_0	chr8	+	3993	2	FSM	ENSMUSG00000047710.9	ENSMUST00000051870.8	4013	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAACATCTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13919651	13931630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13919812_13927797
ENSMUSG00000047710.9_1	chr8	+	3968	2	FSM	ENSMUSG00000047710.9	ENSMUST00000128557.3	3977	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAACATCTTCATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	13919703	13931630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_13919839_13927797
ENSMUSG00000047712.9_0	chr10	-	4200	8	FSM	ENSMUSG00000047712.9	ENSMUST00000061601.9	4228	8	17	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAAGTGGACCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	8394572	8080583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047712.9_3	chr10	-	2310	9	FSM	ENSMUSG00000047712.9	ENST00000367463.5	2320	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCCTTTCCATTAATC	NA	NA	NA	NA	NA	NA	NA	NA	8394564	8081425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_8081776_8082815_8083435_8121666_8121825_8123852_8123951_8173819_8173974_8183171_8183252_8205831_8205988_8266651_8266696_8393913
ENSMUSG00000047714.15_0	chr16	-	4065	6	FSM	ENSMUSG00000047714.15	ENSMUST00000060188.14	4078	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTTTTCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	31094085	31070357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31073552_31077154_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUSG00000047714.15_7	chr16	-	934	5	FSM	ENSMUSG00000047714.15	ENSMUST00000115233.2	958	5	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAAAGGAAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31093801	31076807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31077323_31079391_31079487_31080047_31080126_31084122_31084231_31093663
ENSMUSG00000047719.3_0	chr4	-	2966	2	FSM	ENSMUSG00000047719.3	ENSMUST00000051633.3	2992	2	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAAAACGTATGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	148529215	148518964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148521100_148528384
ENSMUSG00000047721.9_0	chr7	+	1251	3	FSM	ENSMUSG00000047721.9	ENSMUST00000130498.2	1266	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGATGGACACAATGCACG	NA	NA	NA	NA	NA	NA	NA	NA	126294616	126296224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126295272_126295354_126295453_126295726
ENSMUSG00000047728.14_0	chr15	+	1496	5	FSM	ENSMUSG00000047728.14	ENSMUST00000229521.2	1498	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGTGCTTGAATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	75088226	75094508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75088293_75088532_75088604_75089563_75089681_75092469_75092690_75093486
ENSMUSG00000047728.14_1	chr15	+	1447	4	FSM	ENSMUSG00000047728.14	ENSMUST00000055719.8	1470	4	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGGAATATGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75088457	75094500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75088604_75089563_75089681_75092469_75092640_75093486
ENSMUSG00000047731.18_0	chr19	+	3886	4	FSM	ENSMUSG00000047731.18	ENSMUST00000138302.9	3900	4	8	6	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTCCTGCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	46587530	46645822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46587733_46632791_46632895_46640912_46641075_46642403
ENSMUSG00000047731.18_1	chr19	+	3893	5	FSM	ENSMUSG00000047731.18	ENSMUST00000099376.11	3911	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTCTACACAATCTCC	NA	NA	NA	NA	NA	NA	NA	NA	46587562	46645813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46587733_46595150_46595199_46632791_46632895_46640912_46641075_46642403
ENSMUSG00000047731.18_3	chr19	+	3844	4	FSM	ENSMUSG00000047731.18	ENSMUST00000111855.5	3865	4	19	2	19	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAATCTCCTGCCGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	46611858	46645822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46612019_46632791_46632895_46640912_46641075_46642403
ENSMUSG00000047747.11_0	chr8	+	9665	7	FSM	ENSMUSG00000047747.11	ENSMUST00000078525.7	9682	7	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTAGATCCCCTAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	83589997	83817893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_83591120_83716975_83717227_83730203_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047747.11_1	chr8	+	2262	7	FSM	ENSMUSG00000047747.11	ENST00000306799.7	2272	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCTGTCAGGGGCCATC	NA	NA	NA	NA	NA	NA	NA	NA	83590266	83810885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_83591120_83716975_83717101_83730203_83730276_83732958_83733042_83762653_83762751_83769200_83769412_83810064
ENSMUSG00000047757.18_0	chrX	+	2943	9	FSM	ENSMUSG00000047757.18	ENSMUST00000167446.8	2953	9	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCTAGAGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	163763590	163780258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778768_163778882_163779118_163779765
ENSMUSG00000047757.18_1	chrX	+	2373	9	FSM	ENSMUSG00000047757.18	ENSMUST00000057150.8	2395	9	19	3	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCTTGTTTTCTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	163763726	163780265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_163763807_163765432_163766450_163769555_163769709_163770700_163770794_163774540_163774685_163775726_163775891_163778339_163778419_163778974_163779118_163779765
ENSMUSG00000047766.16_0	chr9	-	2992	17	FSM	ENSMUSG00000047766.16	ENSMUST00000065603.12	3017	17	8	17	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGTTAAAAAAAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	60595433	60494528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60587787_60587986_60592317_60592406_60594421_60594479_60595094
ENSMUSG00000047766.16_1	chr9	-	2748	16	FSM	ENSMUSG00000047766.16	ENSMUST00000114034.9	2779	16	14	17	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAGTTAAAAAAAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	60595387	60494528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_60495175_60500888_60501043_60505368_60505479_60508585_60508772_60509861_60510100_60517540_60517705_60522376_60522461_60528851_60529000_60556762_60556825_60573571_60573716_60578577_60578645_60584362_60584567_60587351_60587455_60592317_60592406_60594421_60594479_60595094
ENSMUSG00000047767.18_0	chr7	-	6446	18	FSM	ENSMUSG00000047767.18	ENSMUST00000120267.9	6459	18	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAATGGCTAGATAC	NA	NA	NA	NA	NA	NA	NA	NA	100951291	100934536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100944065_100944129_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ENSMUSG00000047767.18_1	chr7	-	2071	17	FSM	ENSMUSG00000047767.18	ENSMUST00000122116.8	2083	17	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCGTGTCTTGCCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	100951272	100938829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100939142_100939376_100939479_100939569_100939618_100939788_100939939_100940693_100940800_100941085_100941207_100941314_100941387_100941560_100941632_100942579_100942686_100943082_100943192_100945327_100945442_100945714_100945781_100945963_100946216_100946366_100946441_100948212_100948316_100949318_100949419_100951107
ENSMUSG00000047777.10_0	chr4	-	3189	4	FSM	ENSMUSG00000047777.10	ENSMUST00000055688.10	3205	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	450	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGGTCTGTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	152080704	152074094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152076237_152076526_152077050_152078446_152078549_152080282
ENSMUSG00000047786.13_0	chr17	+	3100	6	FSM	ENSMUSG00000047786.13	ENSMUST00000115576.3	3116	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAATTTGGCTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	17622941	17679641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17623289_17647417_17647582_17663909_17664051_17666229_17666326_17674521_17674600_17677367
ENSMUSG00000047786.13_8	chr17	+	2656	3	FSM	ENSMUSG00000047786.13	ENSMUST00000140134.2	2678	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGAATTTGGCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	17669094	17679640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17669400_17674521_17674600_17677367
ENSMUSG00000047789.6_0	chr13	+	8890	15	FSM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATATATTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112797313	112875277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112797407_112806120_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ENSMUSG00000047789.6_3	chr13	+	8799	14	ISM	ENSMUSG00000047789.6	ENSMUST00000052514.6	8910	15	8819	6	8819	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATATATATTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	112806118	112875277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_112806266_112822599_112822733_112825806_112825929_112826055_112826120_112826692_112826787_112831774_112831946_112834518_112834579_112837990_112838186_112840071_112840180_112850674_112850782_112859731_112859846_112862580_112862730_112865731_112865822_112868032
ENSMUSG00000047793.14_1	chr1	+	4006	28	FSM	ENSMUSG00000047793.14	ENST00000405547.7	4023	28	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTAAGTCAGTTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	93163722	93217803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93163924_93183986_93184275_93186687_93186829_93187366_93187530_93189370_93189497_93189825_93189940_93192759_93192874_93193000_93193115_93198863_93198990_93199320_93199426_93199576_93199691_93200213_93200331_93201770_93201888_93202065_93202183_93202326_93202441_93203018_93203193_93208202_93208317_93208958_93209073_93209373_93209488_93209990_93210105_93210413_93210711_93210923_93211108_93211296_93211410_93212106_93212389_93213517_93213663_93213733_93213817_93217029_93217147_93217719
ENSMUSG00000047804.16_0	chr11	-	3851	15	FSM	ENSMUSG00000047804.16	ENSMUST00000102650.10	3874	15	20	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGATTTCTTTGTGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	61821058	61762135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61763848_61768132_61768229_61768799_61768853_61777525_61777609_61781063_61781174_61784205_61784380_61787473_61787619_61791135_61791273_61794732_61794857_61795600_61795686_61800673_61800773_61805849_61806408_61806909_61807093_61813607_61813656_61820814
ENSMUSG00000047810.10_1	chr19	-	1531	11	FSM	ENSMUSG00000047810.10	ENST00000359902.2	1551	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCAAAGGTGAGATATAG	NA	NA	NA	NA	NA	NA	NA	NA	6827932	6823939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6824138_6824786_6824812_6825003_6825103_6825301_6825448_6825549_6825737_6825908_6826053_6826342_6826600_6827051_6827193_6827269_6827366_6827623_6827742_6827812
ENSMUSG00000047821.17_0	chr11	+	3890	6	FSM	ENSMUSG00000047821.17	ENSMUST00000055006.12	3906	6	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATATTTTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	62711065	62733755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047821.17_3	chr11	+	3567	7	FSM	ENSMUSG00000047821.17	ENSMUST00000108703.2	3574	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATATTTTTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	62711294	62733755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62711464_62711557_62711826_62719928_62720025_62724804_62725039_62727504_62727671_62728060_62728157_62731217
ENSMUSG00000047824.14_0	chr3	+	3169	3	FSM	ENSMUSG00000047824.14	ENSMUST00000060061.11	3198	3	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAAACAAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	89337589	89342428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89338037_89338433_89338484_89339756
ENSMUSG00000047824.14_1	chr3	+	2902	3	FSM	ENSMUSG00000047824.14	ENSMUST00000107413.2	2911	3	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAAACAAGGACTCC	NA	NA	NA	NA	NA	NA	NA	NA	89338145	89342428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89338326_89338433_89338484_89339756
ENSMUSG00000047832.10_0	chr12	-	2405	2	FSM	ENSMUSG00000047832.10	ENSMUST00000062092.7	2425	2	9	11	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAATGGAATGTGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	112793000	112783859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112785733_112792468
ENSMUSG00000047832.10_1	chr12	-	1973	2	FSM	ENSMUSG00000047832.10	ENSMUST00000220899.2	1994	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGCAAATGGAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	112793029	112783863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112785733_112792925
ENSMUSG00000047843.17_0	chr5	+	663	3	FSM	ENSMUSG00000047843.17	ENSMUST00000110695.8	669	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACCATTGTGTAGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	144181246	144201199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_144181426_144192619_144192723_144200818
ENSMUSG00000047843.17_1	chr5	+	941	3	FSM	ENSMUSG00000047843.17	ENSMUST00000056578.7	955	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTGTGTCTGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	144192050	144201377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_144192330_144192619_144192723_144200818
ENSMUSG00000047866.21_0	chr8	+	2843	15	FSM	ENSMUSG00000047866.21	ENSMUST00000034141.18	2859	15	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACCTAGAATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87350679	87443251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_87351045_87358013_87358249_87360496_87360629_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUSG00000047866.21_10	chr8	+	2352	13	FSM	ENSMUSG00000047866.21	ENSMUST00000122188.10	2371	13	11	8	11	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACCTAGAATTCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	87350744	87443251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_87351045_87358013_87358249_87360496_87360560_87364600_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUSG00000047866.21_26	chr8	+	2410	14	FSM	ENSMUSG00000047866.21	ENST00000535754.5	2429	14	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATAGGCCCGAACATA	NA	NA	NA	NA	NA	NA	NA	NA	87350819	87443090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_87351045_87358013_87358249_87361424_87361548_87363106_87363271_87364530_87364626_87368169_87368429_87378803_87378946_87392318_87392470_87394340_87394468_87399563_87399698_87435560_87435704_87439939_87440148_87440530_87440722_87442877
ENSMUSG00000047878.14_0	chr15	-	2082	3	FSM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACATGTAATGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83135972	83110929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83112796_83114714_83114859_83135900
ENSMUSG00000047878.14_1	chr15	-	2008	2	ISM	ENSMUSG00000047878.14	ENSMUST00000049530.14	2092	3	21119	7	21076	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACATGTAATGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	83114856	83110929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_83112796_83114714
ENSMUSG00000047879.18_0	chr18	-	4712	16	FSM	ENSMUSG00000047879.18	ENSMUST00000092096.14	4726	16	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATAAAATGTGTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	10030131	9993069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047879.18_17	chr18	-	1993	15	FSM	ENSMUSG00000047879.18	ENSMUST00000116669.2	2019	15	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAATAAGAACACACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	10030050	9995602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10022817_10022851_10024533_10024680_10029912
ENSMUSG00000047879.18_23	chr18	-	1650	15	FSM	ENSMUSG00000047879.18	ENST00000400266.7	1673	15	17	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATCTTGAGCTCTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	10030067	9996034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_9996249_9997172_9997281_9997716_9997775_10000494_10000624_10001770_10001864_10002367_10002434_10004895_10005011_10005629_10005716_10007766_10007848_10009951_10010083_10012212_10012272_10016540_10016645_10017990_10018096_10024533_10024680_10029912
ENSMUSG00000047881.15_0	chr5	-	3221	7	FSM	ENSMUSG00000047881.15	ENSMUST00000154169.4	3241	7	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	785	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTACCCCTCAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	64126226	64066245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_64068495_64082077_64082217_64084331_64084569_64087820_64087879_64093365_64093438_64095148_64095377_64125988
ENSMUSG00000047888.11_0	chr15	+	17320	25	FSM	ENSMUSG00000047888.11	ENSMUST00000067689.9	17332	25	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATTTACTGTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	80595521	80825282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_80595690_80631606_80631675_80643740_80643832_80668939_80669008_80742881_80742970_80748585_80748608_80760517_80760863_80763067_80765408_80767144_80767304_80768407_80768584_80771159_80771235_80772030_80772077_80773219_80773357_80778529_80778656_80786084_80786217_80786488_80786588_80786720_80786914_80797505_80797644_80800884_80801062_80802151_80802299_80802711_80802808_80807658_80807884_80808286_80808358_80811800_80811941_80813289
ENSMUSG00000047907.12_0	chr2	+	3425	2	FSM	ENSMUSG00000047907.12	ENST00000603338.2	3443	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACTGGGAGTGTCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	169725452	169912558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_169728507_169912187
ENSMUSG00000047909.12_0	chr2	+	1598	7	FSM	ENSMUSG00000047909.12	ENSMUST00000056108.12	1618	7	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTCTAAAACATAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	11783310	11795125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_11783714_11784487_11784709_11786287_11786331_11788451_11788561_11789101_11789264_11791034_11791114_11794544
ENSMUSG00000047911.7_0	chr14	-	918	8	ISM	ENSMUSG00000047911.7	ENSMUST00000062629.5	997	9	396	8	396	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGAACCTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70890128	70884749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_70884990_70885076_70885111_70885484_70885526_70885699_70885852_70886910_70887005_70889562_70889677_70889768_70889855_70889971
ENSMUSG00000047911.7_1	chr14	-	976	9	FSM	ENSMUSG00000047911.7	ENSMUST00000062629.5	997	9	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCAGAACCTCCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70890511	70884749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_70884990_70885076_70885111_70885484_70885526_70885699_70885852_70886910_70887005_70889562_70889677_70889768_70889855_70889971_70890136_70890460
ENSMUSG00000047921.18_0	chr15	-	3292	22	FSM	ENSMUSG00000047921.18	ENSMUST00000023276.16	3301	22	3	6	3	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACACTGTGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	72927656	72461474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72914025_72914053_72922443_72922573_72924010_72924157_72927596
ENSMUSG00000047921.18_1	chr15	-	4031	22	FSM	ENSMUSG00000047921.18	ENSMUST00000089770.11	4048	22	11	6	11	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCACACTGTGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	72933042	72461474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_72462012_72462464_72462689_72557131_72557223_72565352_72565507_72608624_72608736_72629064_72629208_72775405_72775531_72797354_72797508_72808810_72808975_72813708_72813842_72817907_72818035_72820638_72820725_72824822_72824969_72835408_72835536_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ENSMUSG00000047921.18_17	chr15	-	2685	9	FSM	ENSMUSG00000047921.18	ENSMUST00000228960.2	2689	9	3	1	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGGTGTCCCCTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	72932896	72865656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_72866778_72871820_72871965_72884654_72884872_72897810_72897937_72903370_72903493_72922443_72922573_72924010_72924157_72929770_72930364_72932809
ENSMUSG00000047945.7_0	chr4	+	1595	2	FSM	ENSMUSG00000047945.7	ENSMUST00000062356.7	1605	2	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGAGTGGTCTTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	129407382	129409777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129407710_129408509
ENSMUSG00000047963.8_0	chr5	+	1970	2	FSM	ENSMUSG00000047963.8	ENSMUST00000050952.4	1985	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTATTCAATGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	92750918	92754432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92751197_92752740
ENSMUSG00000047977.4_0	chr14	-	4023	3	FSM	ENSMUSG00000047977.4	ENSMUST00000059362.3	4055	3	32	0	32	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTCATTTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	69531716	69526792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69530407_69530557_69530755_69531504
ENSMUSG00000047986.13_0	chr8	+	2449	7	FSM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	84748099	84756921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84748158_84750980_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUSG00000047986.13_1	chr8	+	2389	6	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	2883	3	2883	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	84750982	84756921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_84751030_84752822_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUSG00000047986.13_2	chr8	+	2342	5	ISM	ENSMUSG00000047986.13	ENSMUST00000055077.7	2452	7	4723	3	4723	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAAGATTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	84752822	84756921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_84752904_84753377_84753521_84753628_84753714_84754754_84754801_84754934
ENSMUSG00000047989.12_0	chr18	-	2178	2	FSM	ENSMUSG00000047989.12	ENSMUST00000141489.2	2207	2	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGACATGTTTTGTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	24254991	24237823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24239716_24254705
ENSMUSG00000047989.12_1	chr18	-	2481	5	FSM	ENSMUSG00000047989.12	ENSMUST00000153360.8	2498	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGTTTTGTTGGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	24254999	24237819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24239716_24244771_24244840_24245717_24245830_24247133_24247245_24254705
ENSMUSG00000048000.16_0	chr1	+	5695	29	FSM	ENSMUSG00000048000.16	ENSMUST00000027475.15	5724	29	5	24	5	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAAAAATTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	87254729	87378494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87291825_87291956_87292905_87293002_87301718_87301834_87306693_87306806_87307689_87307731_87331388_87331569_87334705_87334924_87335014_87335178_87335256_87335446_87338383_87338581_87339429_87339590_87344539_87344707_87346809_87346902_87348006_87348115_87349212_87349314_87350902_87351004_87352786_87352949_87356291_87356451_87361401_87361639_87364490_87364614_87368109_87368335_87368438_87368645_87369732_87369888_87371366_87371549_87374033_87374182_87376799
ENSMUSG00000048000.16_11	chr1	+	640	4	FSM	ENSMUSG00000048000.16	ENST00000492910.5	649	4	2	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTGATCTAAACAATG	NA	NA	NA	NA	NA	NA	NA	NA	87254752	87283132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87254815_87261991_87262057_87282125_87282209_87282702
ENSMUSG00000048000.16_12	chr1	+	501	5	FSM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCAAAGGCAGTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	87254751	87282882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87254815_87261991_87262057_87268879_87268990_87282125_87282209_87282702
ENSMUSG00000048000.16_16	chr1	+	494	4	FSM	ENSMUSG00000048000.16	ENST00000490612.5	506	4	2	10	2	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACCTAAACCAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	87254753	87282894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87254815_87261991_87262057_87282042_87282209_87282692
ENSMUSG00000048000.16_22	chr1	+	573	3	ISM	ENSMUSG00000048000.16	ENST00000492910.5	649	4	7246	7	7245	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTGATCTAAACAATG	NA	NA	NA	NA	NA	NA	NA	NA	87261996	87283132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87262057_87282125_87282209_87282702
ENSMUSG00000048000.16_23	chr1	+	436	4	ISM	ENSMUSG00000048000.16	ENST00000464402.5	508	5	7242	7	7242	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTCAAAGGCAGTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	87261993	87282882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_87262057_87268879_87268990_87282125_87282209_87282702
ENSMUSG00000048004.16_0	chr12	+	494	3	FSM	ENSMUSG00000048004.16	ENST00000433641.5	514	3	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTATTCCTTCTCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	119978494	119982423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_119978738_119979869_119979942_119982244
ENSMUSG00000048004.16_1	chr12	+	499	3	NNC	ENSMUSG00000048004.16	novel	514	3	NA	NA	7	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTATTCCTTCTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119978489	119982421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_119978738_119979867_119979942_119982244
ENSMUSG00000048007.5_0	chrX	-	1404	2	FSM	ENSMUSG00000048007.5	ENSMUST00000054213.5	1421	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATCAATGTTGTGACGAA	NA	NA	NA	NA	NA	NA	NA	NA	133442605	133438012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133439017_133442205
ENSMUSG00000048012.20_0	chr7	-	9185	3	FSM	ENSMUSG00000048012.20	ENSMUST00000149011.9	9230	3	37	8	37	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCACTGGCTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44393617	44380911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44387459_44388926_44389060_44391112
ENSMUSG00000048027.10_0	chr17	-	5685	3	FSM	ENSMUSG00000048027.10	ENSMUST00000170578.3	5698	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTTAAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	16046841	16023455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_16028064_16040931_16041441_16046273
ENSMUSG00000048027.10_4	chr17	-	3235	4	FSM	ENSMUSG00000048027.10	ENST00000513185.3	3255	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGCCCGATGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	16046679	16024933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_16026098_16026911_16028064_16040927_16041441_16046273
ENSMUSG00000048029.11_0	chr19	+	792	6	FSM	ENSMUSG00000048029.11	ENST00000409522.5	813	6	14	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGAGGGGAGTATGGGG	NA	NA	NA	NA	NA	NA	NA	NA	58931849	58957603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_58932054_58947437_58947495_58948554_58948723_58952809_58953006_58956933_58957002_58957504
ENSMUSG00000048039.9_0	chr3	+	2881	4	FSM	ENSMUSG00000048039.9	ENSMUST00000055984.7	2893	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACTTATGTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	87837627	87847988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87837919_87838637_87839583_87845880_87846082_87846544
ENSMUSG00000048039.9_1	chr3	+	1373	4	FSM	ENSMUSG00000048039.9	ENST00000313146.10	1394	4	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCACCTCTAGGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	87838640	87846839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87839282_87839346_87839583_87845880_87846082_87846544
ENSMUSG00000048040.9_0	chrX	+	1515	1	FSM	ENSMUSG00000048040.9	ENSMUST00000058119.9	1532	1	8	9	8	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAAACTCTTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	134894580	134896095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134894600_134896100
ENSMUSG00000048047.4_0	chrX	+	5105	2	FSM	ENSMUSG00000048047.4	ENSMUST00000049740.3	5122	2	10	7	-9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAATTTCTGAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	37278679	37285916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_37278960_37281091
ENSMUSG00000048058.18_0	chr2	-	3822	6	FSM	ENSMUSG00000048058.18	ENSMUST00000058790.12	3833	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTGTCGTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	102016725	101780553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_101943877_101944025_102016624
ENSMUSG00000048058.18_2	chr2	-	1132	5	FSM	ENSMUSG00000048058.18	ENST00000528989.5	1146	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTTGGAATGACCTG	NA	NA	NA	NA	NA	NA	NA	NA	102016756	101783127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_101783521_101785173_101785520_101888251_101888387_101900277_101900404_102016624
ENSMUSG00000048076.15_0	chr11	-	1973	5	FSM	ENSMUSG00000048076.15	ENSMUST00000163300.8	1991	5	13	5	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGATGGGCTTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59118975	59102242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118701
ENSMUSG00000048076.15_3	chr11	-	1697	4	ISM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	14207	8	14207	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTGATGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59104351	59102246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165
ENSMUSG00000048076.15_4	chr11	-	1797	5	FSM	ENSMUSG00000048076.15	ENST00000541182.1	1814	5	9	8	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTGATGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59118549	59102246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118447
ENSMUSG00000048076.15_5	chr11	-	1786	5	FSM	ENSMUSG00000048076.15	ENSMUST00000061242.8	1800	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTGATGGGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	59119089	59102246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59103522_59103646_59103772_59103968_59104080_59104165_59104350_59118998
ENSMUSG00000048080.3_0	chr14	-	5566	2	FSM	ENSMUSG00000048080.3	ENSMUST00000214152.2	5572	2	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAATGTTTACAAATT	NA	NA	NA	NA	NA	NA	NA	NA	50479321	50470991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_50476359_50479122
ENSMUSG00000048087.7_0	chr16	-	2072	1	FSM	ENSMUSG00000048087.7	ENSMUST00000059524.7	2093	1	9	12	9	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3182	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAATAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	45975431	45973359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_45973400_45975400
ENSMUSG00000048096.8_0	chr1	+	3939	3	FSM	ENSMUSG00000048096.8	ENSMUST00000059352.3	3948	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTAGTCCTGGCTAACA	NA	NA	NA	NA	NA	NA	NA	NA	135252553	135295803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135253009_135291407_135292908_135293819
ENSMUSG00000048100.14_0	chr3	+	2432	4	FSM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTCAAAAACCAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108479014	108490527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108479065_108480195_108480275_108485431_108485530_108488322
ENSMUSG00000048100.14_1	chr3	+	2375	3	ISM	ENSMUSG00000048100.14	ENSMUST00000143054.2	2443	4	1188	11	1188	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTCAAAAACCAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108480202	108490527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_108480275_108485431_108485530_108488322
ENSMUSG00000048106.7_0	chr3	+	6133	1	FSM	ENSMUSG00000048106.7	ENSMUST00000198527.3	6148	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAGATACAGCACTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	19949056	19955189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_19949100_19955200
ENSMUSG00000048108.14_0	chr6	-	17113	5	FSM	ENSMUSG00000048108.14	ENSMUST00000056623.13	17152	5	30	9	30	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGCGACACCCACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	116693844	116656032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_116672491_116673767_116673908_116675281_116675354_116678937_116679005_116693468
ENSMUSG00000048109.11_1	chr3	-	4339	2	FSM	ENSMUSG00000048109.11	ENSMUST00000061772.11	4343	2	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTGAGGAGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	107240988	107232739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107233621_107237530
ENSMUSG00000048109.11_16	chr3	-	3070	2	FSM	ENSMUSG00000048109.11	ENST00000650953.2	3083	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGAGCTGCTTTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107240374	107233307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107233621_107237617
ENSMUSG00000048109.11_2	chr3	-	3382	3	FSM	ENSMUSG00000048109.11	ENST00000618772.4	3420	3	27	11	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAATGTTTTTCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	107240453	107233263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107233621_107234291_107234394_107237530
ENSMUSG00000048118.18_0	chr12	+	4971	24	FSM	ENSMUSG00000048118.18	ENSMUST00000046305.12	4998	24	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATTGAAAAAAAGACAAT	NA	NA	NA	NA	NA	NA	NA	NA	71062771	71145347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71062936_71063864_71063923_71066147_71066259_71068966_71069033_71070273_71070365_71083883_71083964_71084044_71084140_71086612_71086746_71091797_71091878_71092887_71092965_71093967_71094135_71106835_71106909_71108055_71108151_71108304_71108403_71109866_71110099_71113852_71114113_71116607_71116806_71118581_71118667_71119363_71119506_71121709_71122844_71123216_71123322_71133228_71133436_71134234_71134382_71144274
ENSMUSG00000048120.17_0	chr19	+	4197	10	FSM	ENSMUSG00000048120.17	ENSMUST00000112231.9	4221	10	16	8	16	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGTGATATAAACGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	40648229	40730038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40648345_40699606_40699735_40708900_40709019_40711530_40711682_40713368_40713529_40714465_40714703_40715731_40715993_40722110_40722231_40725193_40725329_40727266
ENSMUSG00000048126.17_0	chr1	-	8969	40	NIC	ENSMUSG00000048126.17	novel	9001	41	NA	NA	16	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTTGGTGGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	90771658	90694585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_90695328_90696045_90696211_90700673_90700773_90701158_90701423_90703252_90704008_90705162_90705266_90706477_90707177_90707709_90707807_90709356_90709851_90710062_90710100_90710180_90710214_90711947_90712011_90712928_90712992_90713443_90713480_90713611_90713663_90714359_90714423_90715644_90715708_90715936_90716000_90716752_90716816_90717265_90717302_90719645_90719700_90720131_90720198_90720735_90720799_90721731_90721786_90721897_90721943_90722045_90722073_90722733_90722806_90723636_90723691_90724201_90724295_90725773_90725920_90727717_90727797_90728931_90729270_90729813_90730414_90731360_90731976_90735192_90735799_90737847_90738451_90738980_90739554_90743672_90744258_90757864_90757981_90771467
ENSMUSG00000048126.17_2	chr1	-	8989	41	FSM	ENSMUSG00000048126.17	ENSMUST00000097653.11	9001	41	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTTGGTGGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	90771666	90694585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_90695328_90696045_90696211_90700673_90700773_90701158_90701423_90703252_90704008_90705162_90705266_90706477_90707177_90707709_90707807_90709356_90709851_90709938_90709951_90710062_90710100_90710180_90710214_90711947_90712011_90712928_90712992_90713443_90713480_90713611_90713663_90714359_90714423_90715644_90715708_90715936_90716000_90716752_90716816_90717265_90717302_90719645_90719700_90720131_90720198_90720735_90720799_90721731_90721786_90721897_90721943_90722045_90722073_90722733_90722806_90723636_90723691_90724201_90724295_90725773_90725920_90727717_90727797_90728931_90729270_90729813_90730414_90731360_90731976_90735192_90735799_90737847_90738451_90738980_90739554_90743672_90744258_90757864_90757981_90771467
ENSMUSG00000048126.17_22	chr1	-	3072	6	FSM	ENSMUSG00000048126.17	ENST00000392003.6	3086	6	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAACCATGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90757971	90735194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90757864
ENSMUSG00000048126.17_24	chr1	-	3679	7	FSM	ENSMUSG00000048126.17	ENST00000392004.7	3689	7	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAACCATGGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	90757975	90735194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_90735799_90737847_90738451_90738980_90739554_90740936_90741537_90743672_90744258_90749523_90750127_90757864
ENSMUSG00000048138.11_0	chr19	+	2321	4	FSM	ENSMUSG00000048138.11	ENSMUST00000053068.7	2337	4	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACCCAGTATTTGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	25649786	25656351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_25650123_25650779_25651341_25652914_25653018_25655030
ENSMUSG00000048148.19_0	chr8	+	7827	19	FSM	ENSMUSG00000048148.19	ENSMUST00000093427.11	7840	19	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATTGAACAATAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	73373343	73441358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73373638_73380113_73380200_73383688_73383806_73388774_73389073_73393237_73394508_73397531_73397736_73398814_73398975_73401034_73401153_73401731_73401891_73408551_73408750_73414694_73414818_73419547_73419757_73421895_73422169_73424411_73424503_73429446_73429602_73431462_73431740_73434014_73434566_73436058_73436165_73438220
ENSMUSG00000048154.18_0	chr15	-	19787	55	FSM	ENSMUSG00000048154.18	ENSMUST00000178486.9	19805	55	10	8	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACAAGTGCCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	98769054	98729557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157_98738299_98738441_98738570_98738642_98738776_98739290_98739422_98739619_98739796_98739908_98739985_98740623_98740784_98740939_98741108_98741232_98741374_98741475_98744428_98744523_98744757_98744854_98744922_98745018_98745104_98745238_98745363_98747100_98749083_98749275_98749413_98749487_98749671_98749771_98751587_98751670_98751722_98751913_98751988_98752063_98752306_98752411_98752497_98752594_98752733_98752905_98753017_98753190_98753257_98753415_98753563_98753644_98753780_98753958_98754064_98754150_98754271_98754487_98754710_98755268_98755317_98755405_98755516_98755602_98755768_98755922_98756105_98757390_98757496_98758514_98758626_98758931_98759046_98759482_98760565_98760656_98762091_98762226_98762373_98762529_98762688_98762814_98762930_98763008_98763175_98763381_98763545_98763669_98763780_98763876_98764101_98764256_98764384_98764552_98764639_98768894
ENSMUSG00000048154.18_12	chr15	-	19800	55	FSM	ENSMUSG00000048154.18	ENSMUST00000023741.16	19823	55	13	10	-8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAATACAAGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	98769072	98729562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98732474_98732596_98732706_98732788_98732863_98733062_98733349_98734955_98735087_98735175_98735313_98737157_98738299_98738441_98738570_98738642_98738776_98739290_98739422_98739619_98739796_98739908_98739985_98740623_98740784_98740939_98741108_98741232_98741374_98741475_98744428_98744523_98744757_98744854_98744922_98745018_98745104_98745238_98745363_98747100_98749083_98749275_98749413_98749487_98749671_98749771_98751587_98751670_98751722_98751913_98751988_98752063_98752306_98752411_98752497_98752594_98752733_98752905_98753017_98753190_98753257_98753415_98753567_98753648_98753780_98753958_98754064_98754150_98754271_98754487_98754710_98755268_98755317_98755405_98755516_98755602_98755768_98755922_98756105_98757390_98757496_98758514_98758626_98758931_98759046_98759482_98760565_98760656_98762091_98762226_98762373_98762529_98762688_98762814_98762930_98763008_98763175_98763381_98763545_98763669_98763780_98763876_98764101_98764256_98764384_98764552_98764639_98768894
ENSMUSG00000048170.15_0	chr7	-	4200	16	FSM	ENSMUSG00000048170.15	ENSMUST00000057557.14	4237	16	8	29	-1	-29	multi-exon	TRUE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCCTAAAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128342211	128298193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_128300295_128301042_128301132_128303966_128304132_128305218_128305353_128306202_128306369_128308771_128308890_128310805_128310930_128311505_128311685_128314387_128314489_128316122_128316275_128317669_128317815_128322288_128322391_128325659_128325702_128325791_128325933_128326836_128326923_128341856
ENSMUSG00000048175.14_1	chr15	-	2203	4	FSM	ENSMUSG00000048175.14	ENSMUST00000143400.8	2226	4	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAAAGCAAATTTGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98063495	98032529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98034320_98039164_98039270_98040531_98040696_98063351
ENSMUSG00000048175.14_10	chr15	-	566	4	FSM	ENSMUSG00000048175.14	ENST00000535055.5	568	4	2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98043540	98034112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98034337_98039146_98039270_98040531_98040692_98043481
ENSMUSG00000048175.14_11	chr15	-	499	3	ISM	ENSMUSG00000048175.14	ENST00000535055.5	568	4	2859	0	2857	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTACAACAACGATACGCC	NA	NA	NA	NA	NA	NA	NA	NA	98040683	98034112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_98034337_98039146_98039270_98040531
ENSMUSG00000048186.15_0	chr2	+	1117	6	FSM	ENSMUSG00000048186.15	ENST00000378605.3	1132	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGGTAAAACACATTTAC	NA	NA	NA	NA	NA	NA	NA	NA	4749038	4801389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_4749369_4754346_4754470_4757530_4757803_4767888_4768115_4793266_4793387_4801343
ENSMUSG00000048200.13_0	chr7	+	1689	10	FSM	ENSMUSG00000048200.13	ENSMUST00000053670.12	1698	10	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTCCTTGGCTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	141041013	141046524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141041103_141043296_141043486_141043562_141043675_141044043_141044207_141044608_141044756_141044851_141044943_141045176_141045270_141045431_141045599_141045678_141045751_141045958
ENSMUSG00000048216.14_0	chr6	-	2158	2	FSM	ENSMUSG00000048216.14	ENSMUST00000115492.2	2182	2	0	24	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13838453	13835090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13837073_13838277
ENSMUSG00000048218.7_0	chr15	-	2965	1	FSM	ENSMUSG00000048218.7	ENSMUST00000229890.2	2998	1	32	1	32	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTATGCTTGAGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	97144971	97142006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97142000_97145000
ENSMUSG00000048218.7_1	chr15	-	2782	2	FSM	ENSMUSG00000048218.7	ENSMUST00000053106.7	2801	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAATACATACACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	97145157	97142032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97144479_97144821
ENSMUSG00000048222.4_0	chr2	-	3350	7	FSM	ENSMUSG00000048222.4	ENSMUST00000056732.4	3362	7	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCATTCCAGTTCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	121304542	121290721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121292786_121292867_121292958_121295259_121295420_121297216_121297378_121297468_121297578_121300259_121300798_121304314
ENSMUSG00000048232.13_0	chr4	-	4625	11	FSM	ENSMUSG00000048232.13	ENSMUST00000052236.13	4635	11	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGGTGCTTCTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	45084601	45034253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45036083_45040525_45040708_45041731_45042046_45043639_45043904_45044715_45044869_45046343_45046415_45048439_45048577_45051552_45051703_45058328_45059151_45061939_45062531_45084489
ENSMUSG00000048234.14_0	chr1	-	2470	7	FSM	ENSMUSG00000048234.14	ENSMUST00000062525.11	2492	7	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACAAAAATTTTTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	39616475	39590387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39591597_39594558_39594752_39597395_39597493_39599773_39599857_39603128_39603198_39604162_39604414_39615907
ENSMUSG00000048249.15_0	chr17	+	7455	9	FSM	ENSMUSG00000048249.15	ENSMUST00000062519.14	7462	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTTTGCCTCATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	26934630	26995609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26934749_26955762_26955958_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299_26982423_26990265
ENSMUSG00000048249.15_1	chr17	+	2666	7	FSM	ENSMUSG00000048249.15	ENSMUST00000142539.8	2674	7	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATAACCGATACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	26934688	26983230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26934749_26958516_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299
ENSMUSG00000048249.15_2	chr17	+	2596	6	ISM	ENSMUSG00000048249.15	ENSMUST00000142539.8	2674	7	23843	3	23843	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAATAACCGATACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	26958526	26983230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_26958643_26961015_26962106_26976778_26976974_26978733_26978924_26981211_26981286_26982299
ENSMUSG00000048264.17_1	chr13	+	8019	37	NNC	ENSMUSG00000048264.17	novel	8023	37	NA	NA	4	-4	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCAGTTTCTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	9326567	9718960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr13_+_9327105_9543138_9543213_9556614_9556726_9583287_9583414_9586691_9586902_9600219_9600355_9601781_9601902_9603309_9603508_9610706_9610799_9613149_9613261_9617866_9617991_9618336_9618447_9618626_9618730_9621085_9621151_9625169_9625264_9625397_9625518_9626839_9626955_9651392_9651533_9654524_9654662_9656358_9656568_9658979_9659095_9660732_9660935_9664382_9664493_9665780_9665862_9671914_9672039_9672617_9672740_9673792_9673905_9673993_9674104_9678008_9678140_9684757_9684927_9687130_9687302_9697014_9697077_9704638_9704697_9706672_9706748_9709280_9709456_9712172_9712297_9715813
ENSMUSG00000048271.15_0	chr5	+	6239	18	FSM	ENSMUSG00000048271.15	ENSMUST00000114884.8	6256	18	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCATTAACCCTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	28522185	28621097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ENSMUSG00000048271.15_1	chr5	+	9510	19	FSM	ENSMUSG00000048271.15	ENSMUST00000059644.13	9510	19	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTTGAAGAGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	28522174	28624237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_28522409_28536108_28536188_28540819_28540869_28541971_28542049_28543993_28544307_28547392_28547513_28557469_28557642_28563271_28563481_28566943_28567233_28573252_28573312_28591484_28591618_28592644_28592989_28594500_28594816_28595881_28596170_28598999_28599669_28613249_28613460_28615568_28615758_28618284_28618374_28618565
ENSMUSG00000048277.16_0	chr11	+	1507	4	FSM	ENSMUSG00000048277.16	ENSMUST00000026649.14	1520	4	11	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117700504	117705107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117700630_117703284_117703523_117703871_117704012_117704103
ENSMUSG00000048277.16_1	chr11	+	1397	4	FSM	ENSMUSG00000048277.16	ENSMUST00000120928.2	1402	4	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGTGTTGTGCTGGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	117700524	117705107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117700630_117703374_117703523_117703871_117704012_117704103
ENSMUSG00000048279.20_1	chr14	+	14984	8	FSM	ENSMUSG00000048279.20	ENST00000682944.1	15006	8	6	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGTATATAGAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	61410749	61452928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61410898_61416670_61416759_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440112
ENSMUSG00000048279.20_3	chr14	+	14866	7	FSM	ENSMUSG00000048279.20	ENST00000402364.1	14888	7	10	12	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGAAAATCATTTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	61410754	61452937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61410898_61418393_61418480_61421400_61421513_61427050_61427198_61428546_61430042_61430836_61430929_61440146
ENSMUSG00000048285.10_0	chr12	+	4660	14	FSM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTCTTGTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	70872287	70949006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70872348_70910650_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_4	chr12	+	4595	13	ISM	ENSMUSG00000048285.10	ENSMUST00000057859.9	4662	14	38368	2	-6	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTCTTGTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	70910655	70949006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_70910917_70919264_70919356_70923933_70924038_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048285.10_5	chr12	+	4554	13	FSM	ENSMUSG00000048285.10	ENST00000395718.6	4567	13	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTCTCTTGTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	70910672	70949006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70910917_70919264_70919356_70923933_70924014_70925190_70925268_70927392_70927580_70930439_70930596_70933797_70933864_70934582_70934652_70936705_70936881_70940380_70940717_70941650_70941783_70944115_70944208_70946157
ENSMUSG00000048307.9_0	chr15	-	2494	5	FSM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTCGTCATCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	36496959	36477821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022_36496140_36496872
ENSMUSG00000048307.9_1	chr15	-	2411	4	ISM	ENSMUSG00000048307.9	ENSMUST00000057486.9	2509	5	823	8	823	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTTCGTCATCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	36496143	36477821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_36479620_36484126_36484286_36485940_36486274_36496022
ENSMUSG00000048307.9_5	chr15	-	540	2	FSM	ENSMUSG00000048307.9	ENST00000519316.5	561	2	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAAGGGGCCTGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	36486251	36479390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_36479620_36485940
ENSMUSG00000048310.9_0	chr8	+	3255	3	FSM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGCTGCCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106627072	106658410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106627173_106639251_106640279_106656282
ENSMUSG00000048310.9_1	chr8	+	3157	2	ISM	ENSMUSG00000048310.9	ENSMUST00000049699.9	3255	3	12177	0	12177	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGCTGCCATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	106639249	106658410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_106640279_106656282
ENSMUSG00000048327.7_0	chr2	-	3127	9	FSM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	129139123	129110130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233_129138301_129139024
ENSMUSG00000048327.7_1	chr2	-	3029	8	ISM	ENSMUSG00000048327.7	ENSMUST00000052708.7	3137	9	831	1	831	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTGCCTGTTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	129138301	129110130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_129111184_129112494_129112682_129114416_129114478_129117409_129117566_129123811_129124020_129126776_129128021_129132877_129132930_129138233
ENSMUSG00000048330.15_0	chr7	-	849	4	FSM	ENSMUSG00000048330.15	ENST00000425599.6	864	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAAGCAGCCTGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	108682483	108637655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_108638091_108655950_108656024_108656989_108657217_108682369
ENSMUSG00000048332.14_0	chr3	+	2093	4	FSM	ENSMUSG00000048332.14	ENSMUST00000059562.14	2108	4	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGCTTACTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	52948956	53169093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_52949196_52950539_52951113_53139150_53139250_53167911
ENSMUSG00000048332.14_2	chr3	+	1922	4	FSM	ENSMUSG00000048332.14	ENSMUST00000147139.2	1932	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAATAGCTTACTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	52949006	53169093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_52949102_52950566_52951113_53139150_53139250_53167911
ENSMUSG00000048347.6_0	chr18	+	5005	1	FSM	ENSMUSG00000048347.6	ENSMUST00000055949.4	5041	1	28	8	28	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTTTTTGGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37622545	37627550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37622500_37627600
ENSMUSG00000048349.10_0	chr14	-	4423	3	FSM	ENSMUSG00000048349.10	ENSMUST00000053016.10	4445	3	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTGATTGTATCGGT	NA	NA	NA	NA	NA	NA	NA	NA	104705418	104699116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_104701981_104703120_104704308_104705046
ENSMUSG00000048351.15_0	chr4	+	3696	3	FSM	ENSMUSG00000048351.15	ENSMUST00000131656.2	3714	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTTACATACTGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	108185347	108198734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108185488_108189407_108189549_108195319
ENSMUSG00000048368.10_0	chr13	+	2232	4	FSM	ENSMUSG00000048368.10	ENSMUST00000221170.2	2249	4	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCCTCTTGAGTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	49735945	49746289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49736290_49741109_49741286_49742937_49743892_49745531
ENSMUSG00000048368.10_4	chr13	+	1540	3	FSM	ENSMUSG00000048368.10	ENSMUST00000065494.8	1556	3	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTAAGCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49736241	49746069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_49736290_49742937_49743892_49745531
ENSMUSG00000048368.10_5	chr13	+	1481	2	ISM	ENSMUSG00000048368.10	ENSMUST00000065494.8	1556	3	6707	16	6707	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAACTAAGCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	49742948	49746069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_49743892_49745531
ENSMUSG00000048371.9_0	chr8	+	5664	2	FSM	ENSMUSG00000048371.9	ENSMUST00000059588.8	5692	2	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGCAAAATGAAATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	105318095	105325643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_105318228_105320111
ENSMUSG00000048376.7_0	chr13	-	3316	2	FSM	ENSMUSG00000048376.7	ENSMUST00000059193.7	3336	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2297	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAATAAACTAAAACCATG	NA	NA	NA	NA	NA	NA	NA	NA	95754986	95738321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_95741446_95754794
ENSMUSG00000048379.10_0	chr14	+	6850	2	FSM	ENSMUSG00000048379.10	ENSMUST00000065562.6	6877	2	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATCCAAAAGCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47514401	47533546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47514679_47526973
ENSMUSG00000048387.9_0	chr12	+	1996	3	FSM	ENSMUSG00000048387.9	ENSMUST00000057021.9	2012	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGCACGTTAGAATAGAT	NA	NA	NA	NA	NA	NA	NA	NA	9624449	9631493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9624743_9629094_9629794_9630489
ENSMUSG00000048388.4_0	chr2	+	5605	8	FSM	ENSMUSG00000048388.4	ENSMUST00000051454.4	5614	8	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATGCTTGTAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	83642981	83713823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_83643322_83683713_83683948_83685780_83685874_83688561_83688718_83690750_83690922_83707014_83707132_83708499_83708624_83709453
ENSMUSG00000048399.5_0	chr16	+	1072	6	FSM	ENSMUSG00000048399.5	ENSMUST00000056087.4	1084	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTATAGACAACCAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	25105572	25241088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_25105773_25136001_25136233_25147012_25147105_25175690_25175868_25231516_25231671_25240870
ENSMUSG00000048400.14_0	chr8	-	1797	7	FSM	ENSMUSG00000048400.14	ENST00000219301.8	1812	7	11	4	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3917	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGATTAGTGTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	96302952	96285700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_96286451_96290977_96291107_96292085_96292345_96297635_96297827_96301790_96301860_96301990_96302239_96302801
ENSMUSG00000048402.15_0	chr1	-	4427	11	FSM	ENSMUSG00000048402.15	ENST00000452319.6	4447	11	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1786	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCTAAAGGCCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	118795904	118763523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_118765908_118767983_118768321_118769645_118769928_118772080_118772246_118773646_118773797_118776112_118776298_118780987_118781111_118782170_118782388_118783165_118783368_118794301_118794488_118795708
ENSMUSG00000048416.16_1	chr3	+	847	6	FSM	ENSMUSG00000048416.16	ENST00000491767.6	852	6	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTGGTTAAATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67281548	67307331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281596_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_12	chr3	+	940	6	FSM	ENSMUSG00000048416.16	ENST00000498592.6	948	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTACCTTTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	67281548	67307375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281596_67300175_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_13	chr3	+	916	6	FSM	ENSMUSG00000048416.16	ENST00000619577.5	930	6	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTACCTTTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	67281554	67307375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281627_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_17	chr3	+	909	6	FSM	ENSMUSG00000048416.16	ENST00000650753.1	917	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTACCTTTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	67281548	67307375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281596_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67307034
ENSMUSG00000048416.16_30	chr3	+	995	7	ISM	ENSMUSG00000048416.16	ENST00000477042.6	1080	8	10336	6	10336	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGGTTAAATTGGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	67291884	67307334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_67292032_67298310_67298356_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_32	chr3	+	858	5	ISM	ENSMUSG00000048416.16	ENST00000650753.1	917	6	10339	8	10339	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTACCTTTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	67291887	67307375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67307034
ENSMUSG00000048416.16_34	chr3	+	800	5	ISM	ENSMUSG00000048416.16	ENST00000491767.6	852	6	18676	5	18676	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTGGTTAAATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67300224	67307331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_4	chr3	+	1067	8	FSM	ENSMUSG00000048416.16	ENST00000477042.6	1080	8	4	9	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGTGGTTAAATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67281552	67307331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281627_67291883_67292032_67298310_67298356_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048416.16_7	chr3	+	1066	7	FSM	ENSMUSG00000048416.16	ENST00000359117.9	1078	7	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACTACCTTTAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	67281552	67307375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_67281627_67291883_67292032_67300224_67300309_67301267_67301397_67302584_67302745_67305113_67305244_67307034
ENSMUSG00000048424.19_0	chr15	+	4208	15	FSM	ENSMUSG00000048424.19	ENSMUST00000227191.3	4230	15	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAATATTATCTTACATC	NA	NA	NA	NA	NA	NA	NA	NA	8997499	9067409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_8998001_9029610_9029670_9030448_9030489_9030912_9030991_9031517_9031593_9035580_9035653_9037143_9037287_9041758_9041866_9043848_9043934_9055763_9055867_9057188_9057314_9058727_9058849_9060828_9060972_9063023_9063214_9065043
ENSMUSG00000048429.11_0	chr9	+	3159	2	FSM	ENSMUSG00000048429.11	ENSMUST00000062125.11	3170	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTACTGTTTCTTGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	21504028	21507266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21504367_21504445
ENSMUSG00000048439.16_0	chr5	+	2891	7	FSM	ENSMUSG00000048439.16	ENSMUST00000049887.13	2914	7	8	15	8	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATATAGATAAACATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	24369968	24388996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_24370202_24372340_24372564_24374293_24374389_24380451_24380529_24382997_24383085_24386078_24386164_24386905
ENSMUSG00000048440.17_0	chr17	+	2228	13	FSM	ENSMUSG00000048440.17	ENSMUST00000169591.8	2242	13	7	7	-4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32755538	32770765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_32755630_32755968_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUSG00000048440.17_2	chr17	+	2217	13	FSM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32755546	32770765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_32755630_32755971_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUSG00000048440.17_3	chr17	+	2136	12	ISM	ENSMUSG00000048440.17	ENSMUST00000003416.15	2227	13	427	6	427	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGACTAGCATGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	32755969	32770765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_32756171_32759244_32759390_32761711_32761766_32761850_32761979_32763081_32763204_32763856_32764128_32765342_32765410_32765603_32765734_32769226_32769361_32769476_32769542_32769705_32769789_32770029
ENSMUSG00000048442.16_0	chr11	+	1095	3	FSM	ENSMUSG00000048442.16	ENSMUST00000152171.8	1113	3	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTTTGGCTGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	115790805	115797091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115791169_115795980_115796129_115796507
ENSMUSG00000048442.16_3	chr11	+	634	3	FSM	ENSMUSG00000048442.16	ENST00000375215.3	654	3	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACAAGTGTTGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	115790891	115796774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115791069_115795938_115796129_115796507
ENSMUSG00000048445.7_0	chr11	-	3399	19	FSM	ENSMUSG00000048445.7	ENSMUST00000056781.5	3403	19	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCTGTCTTGTCCTA	NA	NA	NA	NA	NA	NA	NA	NA	120823696	120717356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120717751_120751226_120751453_120751963_120752096_120757380_120757503_120764411_120764626_120769703_120769875_120772640_120772742_120776058_120776212_120776675_120776890_120785424_120785560_120786082_120786246_120788634_120788794_120792700_120792902_120794141_120794217_120794348_120794507_120794809_120794912_120810298_120810408_120812345_120812761_120823541
ENSMUSG00000048450.11_0	chr5	-	1915	2	FSM	ENSMUSG00000048450.11	ENSMUST00000063116.10	1935	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	479	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAATGATGTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	37981918	37977839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_37979045_37981208
ENSMUSG00000048458.9_0	chr3	+	4687	2	FSM	ENSMUSG00000048458.9	ENSMUST00000066610.8	4701	2	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGCCCTGGTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	105611921	105628151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105612142_105623684
ENSMUSG00000048458.9_1	chr3	+	1862	2	FSM	ENSMUSG00000048458.9	ENSMUST00000098273.3	1868	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTTAGAAAAATTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	105612773	105625466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105612854_105623684
ENSMUSG00000048478.8_0	chr8	+	2919	3	FSM	ENSMUSG00000048478.8	ENSMUST00000212161.2	2941	3	2	20	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAAAAAGTTTAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	123939616	123943624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123939737_123939826_123940054_123941052
ENSMUSG00000048478.8_2	chr8	+	555	2	FSM	ENSMUSG00000048478.8	ENSMUST00000212637.2	569	2	12	2	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGATCCTTTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	123939648	123948783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123939977_123948556
ENSMUSG00000048481.16_0	chr7	+	2163	3	FSM	ENSMUSG00000048481.16	ENSMUST00000059331.9	2173	3	2	8	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATTAACTTGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	18725171	18735681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18725280_18725756_18726546_18734415
ENSMUSG00000048481.16_1	chr7	+	1879	3	FSM	ENSMUSG00000048481.16	ENST00000322217.6	1885	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATTAACTTGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	18725229	18735681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18725280_18725982_18726546_18734415
ENSMUSG00000048481.16_2	chr7	+	1822	2	ISM	ENSMUSG00000048481.16	ENSMUST00000131087.2	1951	3	746	10	746	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAATTAACTTGAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	18725989	18735681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18726546_18734415
ENSMUSG00000048482.15_1	chr2	+	3959	2	FSM	ENSMUSG00000048482.15	ENSMUST00000111045.9	3973	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAGAATTTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	109523916	109557347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109524255_109553726
ENSMUSG00000048482.15_2	chr2	+	4084	3	FSM	ENSMUSG00000048482.15	ENST00000418212.5	4106	3	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTACATAAAGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	109523936	109557383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109524255_109553382_109553492_109553726
ENSMUSG00000048482.15_6	chr2	+	3885	2	FSM	ENSMUSG00000048482.15	ENST00000439476.6	3905	2	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTACATAAAGTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	109553263	109557383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109553492_109553726
ENSMUSG00000048483.7_0	chr12	-	3415	2	FSM	ENSMUSG00000048483.7	ENSMUST00000095521.3	792	2	-12	-2611	-12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATTTGGTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	87035462	87027543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87030421_87034924
ENSMUSG00000048483.7_1	chr12	-	3449	3	FSM	ENSMUSG00000048483.7	ENSMUST00000222543.2	3462	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTATTTGGTTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	87037198	87027543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87030421_87034924_87035465_87037166
ENSMUSG00000048486.7_0	chr2	-	3945	2	FSM	ENSMUSG00000048486.7	ENSMUST00000109418.2	3967	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTACATTCCGGAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	163314533	163308304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_163312039_163314322
ENSMUSG00000048489.13_0	chr6	+	1333	2	FSM	ENSMUSG00000048489.13	ENSMUST00000067354.10	1339	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATAACTGCAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116627569	116629749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116627807_116628653
ENSMUSG00000048489.13_1	chr6	+	1309	2	FSM	ENSMUSG00000048489.13	ENSMUST00000178241.4	1317	2	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATAACTGCAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116627590	116629749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116627807_116628656
ENSMUSG00000048490.15_0	chr16	-	7633	3	FSM	ENSMUSG00000048490.15	ENST00000400202.5	7651	3	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCTCTAACTTGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	76169925	76084630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_76091904_76127633_76127753_76169684
ENSMUSG00000048495.17_0	chr1	-	1820	8	FSM	ENSMUSG00000048495.17	ENSMUST00000162686.8	1847	8	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAAGTCTATTGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	57446243	57427405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_57427912_57429800_57429918_57430607_57430696_57432508_57432647_57433205_57433251_57435885_57435956_57440527_57440683_57445542
ENSMUSG00000048497.12_0	chr11	+	1811	2	FSM	ENSMUSG00000048497.12	ENSMUST00000129162.3	1828	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGTTGACTGAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	62540284	62557173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62540418_62555495
ENSMUSG00000048521.9_0	chr9	+	1888	2	FSM	ENSMUSG00000048521.9	ENSMUST00000049810.9	1897	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTCAAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123635539	123640812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_123635611_123638995
ENSMUSG00000048521.9_1	chr9	+	1799	1	ISM	ENSMUSG00000048521.9	ENSMUST00000049810.9	1897	2	3474	9	3450	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTTTTCAAACTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	123639013	123640812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_123639000_123640800
ENSMUSG00000048537.17_10	chr9	-	5304	23	FSM	ENSMUSG00000048537.17	ENST00000361417.6	5312	23	4	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTACATGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44639395	44597612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44598731_44598836_44598996_44599720_44599754_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44612242_44612384_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347_44638472_44639316
ENSMUSG00000048537.17_11	chr9	-	5223	22	FSM	ENSMUSG00000048537.17	ENST00000600882.6	5234	22	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTACATGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44638469	44597612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44598731_44598836_44598996_44599720_44599754_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44612242_44612384_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347
ENSMUSG00000048537.17_9	chr9	-	5050	20	FSM	ENSMUSG00000048537.17	ENST00000356063.9	5060	20	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATGTACATGAGTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44638470	44597612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44598731_44598836_44598996_44599913_44600000_44605325_44605429_44605670_44605788_44607333_44607481_44609048_44609140_44609222_44609518_44610643_44610747_44610852_44610994_44615099_44615190_44615357_44615469_44619181_44619338_44622219_44622358_44622444_44622586_44622937_44623220_44626610_44627963_44629570_44629697_44637306_44637478_44638347
ENSMUSG00000048546.9_0	chr15	-	4131	2	FSM	ENSMUSG00000048546.9	ENSMUST00000050467.9	4151	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATAATAGCCTTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	81742676	81732482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81736074_81742136
ENSMUSG00000048550.18_0	chr2	+	3882	3	FSM	ENSMUSG00000048550.18	ENSMUST00000054591.10	3899	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTATCCATAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21210541	21219810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_21210657_21214695_21214853_21216200
ENSMUSG00000048550.18_2	chr2	+	1660	3	FSM	ENSMUSG00000048550.18	ENSMUST00000102952.8	1679	3	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCTAAATCCACACAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	21210564	21219183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_21210657_21214695_21214853_21217772
ENSMUSG00000048550.18_3	chr2	+	1683	3	FSM	ENSMUSG00000048550.18	ENSMUST00000102951.2	1707	3	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGACAGCAGCTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21210612	21219110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_21210801_21214695_21214853_21217772
ENSMUSG00000048562.8_0	chr12	+	4454	3	FSM	ENSMUSG00000048562.8	ENSMUST00000063918.4	4478	3	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTAATAAGTTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	118810080	118816304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_118810227_118811272_118811390_118812113
ENSMUSG00000048572.6_0	chr19	+	5026	2	FSM	ENSMUSG00000048572.6	ENSMUST00000057243.6	5034	2	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAGACACTGATGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	24651373	24659591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_24651708_24654899
ENSMUSG00000048578.12_0	chr5	-	5941	5	FSM	ENSMUSG00000048578.12	ENSMUST00000112121.6	5955	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATACTCCGTGTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	115296231	115281046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115286204_115288127_115288186_115288266_115288444_115288874_115289054_115295861
ENSMUSG00000048581.13_0	chr3	-	1618	5	FSM	ENSMUSG00000048581.13	ENSMUST00000061706.7	1640	5	5	17	5	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAATTTAAAAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	63836888	63822121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_63823160_63827621_63827783_63832754_63832903_63834684_63834745_63836677
ENSMUSG00000048583.17_0	chr7	-	4692	4	FSM	ENSMUSG00000048583.17	ENSMUST00000121128.8	4722	4	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATACTATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	142213208	142204517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142207790_142208036_142208186_142209390_142209554_142212100
ENSMUSG00000048583.17_1	chr7	-	2490	6	FSM	ENSMUSG00000048583.17	ENSMUST00000097936.9	2503	6	1	12	1	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATACTATTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	142211202	142204517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142205362_142205420_142206185_142207297_142207790_142208036_142208186_142209390_142209554_142211124
ENSMUSG00000048603.9_0	chr13	+	1422	3	FSM	ENSMUSG00000048603.9	ENSMUST00000126622.8	1446	3	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAGAGAACCTCAATTA	NA	NA	NA	NA	NA	NA	NA	NA	98453591	98458534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_98454118_98455581_98455654_98457710
ENSMUSG00000048612.17_0	chr19	-	7096	52	NIC	ENSMUSG00000048612.17	novel	7094	53	NA	NA	11	-3	intron_retention	TRUE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACCTTTTACATCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	38032014	37887486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913150_37919402_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUSG00000048612.17_15	chr19	-	6886	53	FSM	ENSMUSG00000048612.17	ENSMUST00000041475.16	6902	53	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATGGATGTTTGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38032014	37887680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37915430_37915443_37919433_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUSG00000048612.17_33	chr19	-	6570	52	FSM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAAATGTCATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38031765	37887739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUSG00000048612.17_35	chr19	-	6694	53	FSM	ENSMUSG00000048612.17	ENST00000359263.9	6708	53	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAAATGTCATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38031850	37887739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37958354_37958394_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789_38012846_38031683
ENSMUSG00000048612.17_38	chr19	-	6489	51	ISM	ENSMUSG00000048612.17	ENST00000358334.9	6581	52	18925	5	18925	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGACAAATGTCATGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	38012846	37887739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_37888216_37889684_37889833_37890271_37890382_37892124_37892316_37893725_37893826_37896034_37896177_37899341_37899438_37899537_37899627_37901784_37901925_37904053_37904203_37904840_37905012_37909166_37909259_37909783_37909940_37911405_37911532_37913053_37913153_37919429_37919511_37921050_37921217_37923207_37923370_37924294_37924394_37924508_37924668_37924761_37924944_37926311_37926390_37927747_37927857_37928292_37928467_37930665_37930812_37931890_37931997_37934078_37934194_37937998_37938163_37939874_37940007_37941390_37941547_37942814_37943008_37944890_37944998_37948161_37948287_37949367_37949546_37955463_37955581_37956775_37956901_37960622_37960706_37963031_37963076_37963305_37963375_37966097_37966202_37968796_37968924_37969670_37969787_37970325_37970357_37971407_37971459_37971536_37971600_37974408_37974538_37975096_37975264_37983869_37983958_37986663_37986773_38011000_38011093_38012789
ENSMUSG00000048616.5_0	chr11	-	1662	1	FSM	ENSMUSG00000048616.5	ENSMUST00000061728.5	1695	1	22	11	22	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAAACCGACTGGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89193136	89191474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_89191500_89193100
ENSMUSG00000048644.9_0	chr8	-	1194	2	FSM	ENSMUSG00000048644.9	ENSMUST00000053252.9	1212	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGATTGCTGAGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	4309261	4307664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_4308648_4309050
ENSMUSG00000048668.17_0	chr6	-	2007	4	FSM	ENSMUSG00000048668.17	ENSMUST00000112152.8	2015	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCCTGTCTCAGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	128339767	128333962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128335157_128336068_128336318_128339020_128339148_128339330
ENSMUSG00000048668.17_2	chr6	-	1566	3	FSM	ENSMUSG00000048668.17	ENSMUST00000057421.15	1584	3	13	5	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128339818	128334327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128335157_128336068_128336318_128339330
ENSMUSG00000048668.17_4	chr6	-	1064	2	FSM	ENSMUSG00000048668.17	ENSMUST00000223237.2	1081	2	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128336303	128334327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128335157_128336068
ENSMUSG00000048668.17_5	chr6	-	1108	3	FSM	ENSMUSG00000048668.17	ENSMUST00000112151.2	1108	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCAGCCTCGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	128339831	128334327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_128335157_128336068_128336318_128339801
ENSMUSG00000048677.10_0	chr7	-	2970	25	FSM	ENSMUSG00000048677.10	ENSMUST00000058022.6	2993	25	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCAAGGTGGCCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	144837729	144807663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144808436_144809187_144809271_144809616_144809699_144810250_144810334_144810466_144810549_144810908_144810983_144811532_144811605_144812251_144812352_144813825_144813876_144814608_144814738_144815669_144815730_144815884_144816005_144820294_144820382_144820514_144820597_144821039_144821141_144821804_144821870_144822596_144822663_144823470_144823571_144826016_144826093_144827598_144827706_144830845_144830963_144832473_144832652_144833013_144833091_144833965_144834031_144837587
ENSMUSG00000048696.12_0	chr10	-	3255	2	FSM	ENSMUSG00000048696.12	ENSMUST00000105350.3	3266	2	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTAAGCGCTGGCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80223490	80216196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80218456_80222494
ENSMUSG00000048699.5_0	chr15	-	672	5	ISM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	50218	5	2462	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGAGGAGTGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101468923	101463710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_101463916_101464668_101464907_101466735_101466832_101467626_101467688_101468851
ENSMUSG00000048699.5_1	chr15	-	702	6	FSM	ENSMUSG00000048699.5	ENST00000549264.2	707	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGAGGAGTGCAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	101519141	101463710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101463916_101464668_101464907_101466735_101466832_101467626_101467688_101468851_101468935_101519122
ENSMUSG00000048701.14_0	chr10	+	5492	9	FSM	ENSMUSG00000048701.14	ENSMUST00000147545.8	5511	9	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1461	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACTCCTGGAACTG	NA	NA	NA	NA	NA	NA	NA	NA	69932961	70029022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_69933412_69978408_69978559_69990537_69990667_70002831_70002936_70004921_70005083_70010840_70010998_70017989_70018091_70023520_70023646_70024907
ENSMUSG00000048706.4_0	chr4	+	3048	2	FSM	ENSMUSG00000048706.4	ENSMUST00000055922.4	3066	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAAATCTGTCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80828892	80873857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_80829883_80871799
ENSMUSG00000048707.10_0	chr2	+	2760	4	FSM	ENSMUSG00000048707.10	ENSMUST00000114336.4	2787	4	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACAAGGCTGCTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	25152648	25159889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25154566_25158843_25159058_25159144_25159252_25159367
ENSMUSG00000048707.10_1	chr2	+	2635	5	FSM	ENSMUSG00000048707.10	ENST00000409012.6	2652	5	10	7	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAAGGCTGCTTTTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	25152697	25159891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25153192_25153269_25154566_25158843_25159058_25159144_25159252_25159367
ENSMUSG00000048728.16_3	chr11	-	1835	5	FSM	ENSMUSG00000048728.16	ENST00000519564.2	1851	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAATAGGTGCTGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	50778316	50763811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50765103_50774010_50774101_50774511_50774639_50777195_50777326_50778119
ENSMUSG00000048732.6_0	chr11	-	2366	2	FSM	ENSMUSG00000048732.6	ENSMUST00000056665.4	2393	2	24	3	24	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAGGTCTAGTTACTTG	NA	NA	NA	NA	NA	NA	NA	NA	100363543	100353442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100355272_100363006
ENSMUSG00000048755.10_0	chr15	-	1895	4	FSM	ENSMUSG00000048755.10	ENSMUST00000061882.10	1917	4	21	1	21	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGCTCTCTCTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	83439915	83430998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83432144_83433318_83433537_83436734_83436823_83439471
ENSMUSG00000048756.12_0	chr10	-	6838	4	FSM	ENSMUSG00000048756.12	ENSMUST00000105502.8	6848	4	5	5	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATGCCCAGGAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	42152743	42057841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_42062292_42072461_42073898_42150811_42151542_42152521
ENSMUSG00000048758.15_0	chr9	+	723	4	FSM	ENSMUSG00000048758.15	ENSMUST00000150576.8	733	4	9	1	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	106306661	106308766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106306776_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048758.15_8	chr9	+	705	4	FSM	ENSMUSG00000048758.15	ENSMUST00000059802.7	710	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGTGTCTGTTGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	106306742	106308766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106306839_106307168_106307214_106307506_106307572_106308267
ENSMUSG00000048763.12_0	chr11	+	1896	4	FSM	ENSMUSG00000048763.12	ENST00000472863.5	1919	4	12	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCACAAAGTATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	96197924	96237746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96198024_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048763.12_3	chr11	+	1456	6	FSM	ENSMUSG00000048763.12	ENST00000460160.5	1467	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGGGCGGGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96197920	96237224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96198024_96212846_96213013_96214089_96214272_96231889_96231978_96235458_96235523_96236371
ENSMUSG00000048763.12_7	chr11	+	1785	5	FSM	ENSMUSG00000048763.12	ENST00000489475.5	1800	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGGGCGGGCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	96205397	96237224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96205726_96214089_96214272_96231889_96231978_96235188_96235523_96236371
ENSMUSG00000048764.17_0	chr5	-	3596	11	FSM	ENSMUSG00000048764.17	ENSMUST00000116553.9	3605	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAATCCTAAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86780283	86669765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86672030_86676018_86676162_86677749_86678010_86681493_86681696_86683059_86683099_86685848_86686013_86687553_86687622_86692637_86692757_86704750_86704906_86739268_86739350_86780182
ENSMUSG00000048764.17_1	chr5	-	3495	10	ISM	ENSMUSG00000048764.17	ENSMUST00000116553.9	3605	11	40932	11	40932	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATGAATCCTAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86739351	86669767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_86672030_86676018_86676162_86677749_86678010_86681493_86681696_86683059_86683099_86685848_86686013_86687553_86687622_86692637_86692757_86704750_86704906_86739268
ENSMUSG00000048772.16_0	chr4	+	983	3	FSM	ENSMUSG00000048772.16	ENSMUST00000062824.12	991	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	117109155	117125777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117109332_117123056_117123173_117125086
ENSMUSG00000048772.16_1	chr4	+	817	3	FSM	ENSMUSG00000048772.16	ENST00000372235.7	830	3	8	5	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	117109231	117125777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117109332_117123056_117123173_117125176
ENSMUSG00000048772.16_2	chr4	+	918	3	FSM	ENSMUSG00000048772.16	ENSMUST00000106434.8	923	3	3	2	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTATCTATCCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	117109241	117125777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_117109353_117123056_117123173_117125086
ENSMUSG00000048776.9_0	chr6	-	1577	4	FSM	ENSMUSG00000048776.9	ENSMUST00000052296.9	1603	4	20	6	20	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACTCACAATGTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	147165645	147153604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_147154076_147158440_147158858_147164767_147164894_147165082
ENSMUSG00000048779.6_0	chr7	-	1158	2	FSM	ENSMUSG00000048779.6	ENST00000680955.1	1177	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAGAGAGTCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100591393	100587387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100588392_100591239
ENSMUSG00000048779.6_1	chr7	-	951	2	FSM	ENSMUSG00000048779.6	ENST00000349767.6	959	2	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAGAGAGTCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100614505	100587387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100588324_100614490
ENSMUSG00000048779.6_2	chr7	-	921	1	ISM	ENSMUSG00000048779.6	ENSMUST00000060174.6	1946	3	25290	551	3096	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGCAGAGAGTCTGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	100588308	100587387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_100587400_100588300
ENSMUSG00000048782.16_0	chr7	+	2296	13	FSM	ENSMUSG00000048782.16	ENSMUST00000169913.8	2321	13	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAATATGTCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	114345014	114449604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_114345242_114368166_114368268_114390186_114390533_114391480_114391534_114393204_114393329_114403713_114403828_114410837_114410964_114428268_114428441_114433987_114434167_114441357_114441425_114444251_114444408_114445686_114445764_114449050
ENSMUSG00000048787.14_0	chr7	-	5956	3	FSM	ENSMUSG00000048787.14	ENSMUST00000059851.14	5985	3	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACCCATGATATCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	119494945	119452024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_119457280_119458602_119459139_119494780
ENSMUSG00000048787.14_1	chr7	-	3052	3	FSM	ENSMUSG00000048787.14	ENSMUST00000098080.9	3072	3	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAAAGTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119494760	119455049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_119457280_119458602_119459139_119494474
ENSMUSG00000048796.8_0	chr3	-	4258	3	FSM	ENSMUSG00000048796.8	ENSMUST00000106655.2	4275	3	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTGAGGAGGACCCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	108108138	108103007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108107032_108107440_108107479_108107942
ENSMUSG00000048799.9_0	chr18	-	4552	21	FSM	ENSMUSG00000048799.9	ENSMUST00000049811.8	4554	21	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTGTGGTCGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53877618	53814795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836317_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53877353_53877420_53877559
ENSMUSG00000048799.9_7	chr18	-	3929	20	FSM	ENSMUSG00000048799.9	ENST00000675442.1	3944	20	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTAAACACAAATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53877315	53815730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836296_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857425_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53876857
ENSMUSG00000048799.9_8	chr18	-	3930	20	NNC	ENSMUSG00000048799.9	novel	3944	20	NA	NA	10	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATTAAACACAAATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	53877312	53815730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_-_53816537_53818954_53819101_53830666_53830766_53836193_53836296_53839891_53840054_53842128_53842222_53846453_53846544_53847835_53847989_53848071_53848169_53851518_53851702_53852287_53852438_53854694_53854873_53856154_53856378_53857421_53857654_53860618_53860817_53864162_53864312_53868714_53868857_53871549_53871665_53873123_53873281_53876857
ENSMUSG00000048807.3_0	chr11	-	3048	2	FSM	ENSMUSG00000048807.3	ENSMUST00000051207.2	3059	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTCTGTCATTCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	3864653	3857021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3857985_3862568
ENSMUSG00000048826.8_0	chr17	-	3234	4	FSM	ENSMUSG00000048826.8	ENSMUST00000053218.7	3250	4	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAAAAAAAAATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	14424344	14415317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14417574_14418078_14418355_14419407_14419541_14423775
ENSMUSG00000048832.10_0	chr19	+	2673	5	FSM	ENSMUSG00000048832.10	ENSMUST00000235927.2	2690	5	17	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	10666131	10691990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10666348_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUSG00000048832.10_1	chr19	+	2673	5	FSM	ENSMUSG00000048832.10	ENSMUST00000087951.7	2686	5	13	0	-1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTCCATGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	10666127	10691990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10666344_10683573_10683673_10687633_10687806_10688634_10688718_10689887
ENSMUSG00000048833.10_1	chr12	+	5183	7	FSM	ENSMUSG00000048833.10	ENSMUST00000085245.7	5201	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCATACCTTATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	80691022	80730103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80719999_80720069_80722622_80722709_80723905_80724041_80726248
ENSMUSG00000048833.10_2	chr12	+	845	6	FSM	ENSMUSG00000048833.10	ENST00000557046.1	858	6	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTAACCATTCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80691659	80726471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80691751_80709243_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726248
ENSMUSG00000048833.10_6	chr12	+	756	5	ISM	ENSMUSG00000048833.10	ENST00000557046.1	858	6	17587	8	17587	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATTAACCATTCAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	80709241	80726471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_80709353_80713308_80713510_80722622_80722709_80723905_80724041_80726248
ENSMUSG00000048834.17_0	chr11	+	2798	5	FSM	ENSMUSG00000048834.17	ENST00000402613.4	2817	5	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGGTTTAATTATGATAC	NA	NA	NA	NA	NA	NA	NA	NA	16207701	16233820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_16208087_16209854_16210022_16211437_16211489_16212913_16213251_16231962
ENSMUSG00000048852.14_0	chr11	-	5254	3	FSM	ENSMUSG00000048852.14	ENSMUST00000094476.9	5264	3	8	2	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	48817978	48795484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48799307_48806004_48807212_48817753
ENSMUSG00000048856.10_0	chr12	+	1579	6	FSM	ENSMUSG00000048856.10	ENSMUST00000057026.10	1580	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTCGCTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108817054	108822740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108817134_108819274_108819319_108819628_108819701_108820141_108820325_108821219_108821545_108821864
ENSMUSG00000048856.10_1	chr12	+	1881	5	FSM	ENSMUSG00000048856.10	ENSMUST00000221080.2	1890	5	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTCGCTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108817072	108822740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108817134_108819274_108819319_108819628_108819701_108820141_108820325_108821219
ENSMUSG00000048856.10_2	chr12	+	1502	5	ISM	ENSMUSG00000048856.10	ENSMUST00000057026.10	1580	6	2218	1	2208	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTCGCTCTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	108819272	108822740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_108819319_108819628_108819701_108820141_108820325_108821219_108821545_108821864
ENSMUSG00000048856.10_3	chr12	+	1817	4	ISM	ENSMUSG00000048856.10	ENSMUST00000221080.2	1890	5	2208	6	2208	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGCTGTGTCGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108819272	108822735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_108819319_108819628_108819701_108820141_108820325_108821219
ENSMUSG00000048865.17_0	chr1	+	3305	8	FSM	ENSMUSG00000048865.17	ENST00000368015.1	3320	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGGAGTTAACAAAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	171216506	171237140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171216840_171230780_171230913_171231357_171231524_171231601_171231706_171231788_171231867_171232377_171232747_171234925_171235204_171235295
ENSMUSG00000048874.16_0	chr1	-	7560	15	FSM	ENSMUSG00000048874.16	ENSMUST00000088310.10	7561	15	4	-3	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTATTTTTGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	30902333	30841419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_30845024_30845249_30845446_30847803_30847894_30849763_30849912_30850852_30851049_30852097_30852234_30853040_30853173_30855548_30855666_30859161_30859319_30859763_30859909_30860211_30860396_30863290_30863601_30868923_30870641_30876185_30876348_30902067
ENSMUSG00000048878.7_0	chr11	+	3469	1	FSM	ENSMUSG00000048878.7	ENSMUST00000053063.7	3495	1	17	9	17	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	126	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGAAACTGTTTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	103007073	103010542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_103007100_103010500
ENSMUSG00000048895.14_0	chr11	+	4161	1	FSM	ENSMUSG00000048895.14	ENSMUST00000053413.12	4162	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCCTGTTTGTGGCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	80367848	80372009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_80367800_80372000
ENSMUSG00000048897.16_0	chr7	+	4708	5	FSM	ENSMUSG00000048897.16	ENSMUST00000049680.10	4721	5	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGAGGTGACTGTACGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79675792	79742492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79676232_79730796_79732289_79735698_79735891_79736181_79736357_79740082
ENSMUSG00000048911.16_0	chr2	-	5972	6	FSM	ENSMUSG00000048911.16	ENSMUST00000059372.11	5978	6	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAATGACCCGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	131194796	131139984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082_131155233_131194655
ENSMUSG00000048911.16_1	chr2	-	5810	5	FSM	ENSMUSG00000048911.16	ENSMUST00000165420.8	5833	5	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAATGACCCGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	131155211	131139984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131145501_131146171_131146252_131147571_131147614_131150394_131150438_131155082
ENSMUSG00000048915.13_0	chr17	-	3715	4	ISM	ENSMUSG00000048915.13	ENSMUST00000076840.12	4032	5	230180	8	230007	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTGATTCTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	62958132	62911186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_62914459_62920310_62920392_62920831_62920898_62957836
ENSMUSG00000048915.13_1	chr17	-	4022	5	NNC	ENSMUSG00000048915.13	novel	4032	5	NA	NA	5	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATTTGATTCTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	63188307	62911186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_-_62914459_62920310_62920392_62920831_62920898_62957836_62958133_63188000
ENSMUSG00000048920.9_0	chr7	-	2826	3	FSM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACAGCTTGTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	16550657	16543171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16545902_16548988_16549052_16550624
ENSMUSG00000048920.9_1	chr7	-	2790	2	ISM	ENSMUSG00000048920.9	ENSMUST00000061390.9	2827	3	1609	1	1609	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACAGCTTGTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	16549048	16543171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_16545902_16548988
ENSMUSG00000048920.9_2	chr7	-	2732	1	NIC	ENSMUSG00000048920.9	novel	2827	3	NA	NA	4754	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTACAGCTTGTTCCACA	NA	NA	NA	NA	NA	NA	NA	NA	16545903	16543171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_16543200_16545900
ENSMUSG00000048921.12_0	chr7	-	3612	3	FSM	ENSMUSG00000048921.12	ENSMUST00000053392.11	3621	3	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAAGAATTCTGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	127048328	127041314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127044310_127047534_127047649_127047825
ENSMUSG00000048922.19_1	chr14	-	3557	15	FSM	ENSMUSG00000048922.19	ENSMUST00000150006.9	3568	15	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGGTCACAGGTAATCT	NA	NA	NA	NA	NA	NA	NA	NA	67953286	67913786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67953200
ENSMUSG00000048922.19_5	chr14	-	3829	15	FSM	ENSMUSG00000048922.19	ENSMUST00000163100.8	3841	15	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTTCCAGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67953051	67913807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_67915472_67917610_67917780_67931074_67931204_67932413_67932500_67934115_67934192_67935387_67935621_67936137_67936211_67937631_67937868_67941416_67941493_67943079_67943247_67944801_67944950_67950536_67950692_67952131_67952306_67952390_67952455_67952672
ENSMUSG00000048924.15_0	chr13	+	2402	12	FSM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATGACAGTTTCAATG	NA	NA	NA	NA	NA	NA	NA	NA	100806285	100833742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100806360_100814411_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ENSMUSG00000048924.15_5	chr13	+	2327	11	ISM	ENSMUSG00000048924.15	ENSMUST00000057325.15	2413	12	8130	8	8130	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTATGACAGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	100814410	100833740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_100814711_100815824_100815884_100818288_100818376_100819274_100819353_100820793_100820880_100823616_100823700_100826826_100826928_100828802_100828911_100830044_100830217_100830877_100831009_100832618
ENSMUSG00000048930.13_0	chr6	-	2836	9	FSM	ENSMUSG00000048930.13	ENSMUST00000032410.14	2848	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCGCAAGTTTAGTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	113354838	113342991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351739_113351846_113351969_113352221_113352800_113353026_113354276
ENSMUSG00000048930.13_3	chr6	-	1696	10	FSM	ENSMUSG00000048930.13	ENSMUST00000043333.9	1708	10	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAAAAAAGTTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	113354337	113343627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113344142_113347182_113347369_113347899_113348010_113349238_113349343_113349425_113349568_113351796_113351846_113351969_113352221_113352800_113353026_113353852_113353907_113354276
ENSMUSG00000048949.9_0	chrX	-	2179	2	FSM	ENSMUSG00000048949.9	ENST00000579008.1	2198	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGGTATAAAGAGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	102209000	102206726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_102208069_102208163
ENSMUSG00000048965.10_0	chr7	-	3725	2	FSM	ENSMUSG00000048965.10	ENSMUST00000054048.10	3761	2	34	2	34	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTTTTTTGTCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	143338203	143332101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143335551_143337927
ENSMUSG00000048967.17_0	chr8	-	777	6	FSM	ENSMUSG00000048967.17	ENSMUST00000152938.9	785	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACCTCTCCCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	70346625	70340445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70343515_70343625_70346560
ENSMUSG00000048967.17_1	chr8	-	718	5	ISM	ENSMUSG00000048967.17	ENSMUST00000152938.9	785	6	2998	5	2998	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCTCCCCTGCCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70343627	70340442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_70340673_70341636_70341788_70341858_70341973_70342092_70342204_70343515
ENSMUSG00000048970.10_0	chrX	-	1441	2	FSM	ENSMUSG00000048970.10	ENSMUST00000058265.8	1449	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTATTACTTTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37723956	37719661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37721001_37723854
ENSMUSG00000048996.7_0	chr13	-	3102	2	FSM	ENSMUSG00000048996.7	ENSMUST00000205976.3	3112	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATCCAGCAGAATTGATG	NA	NA	NA	NA	NA	NA	NA	NA	21726945	21719292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21722138_21726688
ENSMUSG00000048997.18_0	chr3	-	2519	11	FSM	ENSMUSG00000048997.18	ENST00000459635.2	2540	11	9	12	9	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCTCAAGACTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	108117827	108109549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108109690_108110474_108111360_108111816_108111939_108112031_108112231_108112947_108113202_108113541_108113625_108114138_108114426_108114709_108114921_108115278_108115384_108115755_108115822_108117660
ENSMUSG00000049036.8_0	chr12	+	1567	2	FSM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAAGCCTGGCTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	113149549	113153136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_113149579_113151598
ENSMUSG00000049036.8_1	chr12	+	1526	1	ISM	ENSMUSG00000049036.8	ENSMUST00000058491.8	1574	2	2061	7	2061	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAAGCCTGGCTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	113151610	113153136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_113151600_113153100
ENSMUSG00000049038.4_0	chr10	-	1501	2	ISM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	1539	2	1539	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATTATTCCAAAACATC	NA	NA	NA	NA	NA	NA	NA	NA	84962352	84955298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_84956679_84962231
ENSMUSG00000049038.4_1	chr10	-	1561	3	FSM	ENSMUSG00000049038.4	ENSMUST00000050813.4	1567	3	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTATTATTCCAAAACATC	NA	NA	NA	NA	NA	NA	NA	NA	84963887	84955298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_84956679_84962231_84962351_84963825
ENSMUSG00000049044.17_0	chr2	+	3930	27	FSM	ENSMUSG00000049044.17	ENST00000409036.5	3942	27	4	8	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGAAATATTTTTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	71811617	72087808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71811696_71861376_71861520_71864374_71864464_71875445_71875593_71967585_71967676_72004766_72004821_72005145_72005253_72008521_72008644_72010263_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72083283_72083339_72086592
ENSMUSG00000049044.17_40	chr2	+	3865	26	FSM	ENSMUSG00000049044.17	ENST00000538974.5	3881	26	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTGACAAGAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	71922736	72087801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_71922986_71967585_71967676_72005145_72005253_72008521_72008644_72010263_72010448_72025980_72026066_72026559_72026621_72028680_72028758_72029102_72029250_72031391_72031508_72035998_72036088_72038429_72038509_72053360_72053512_72055304_72055394_72056092_72056124_72056342_72056422_72056818_72056966_72059349_72059448_72064420_72064547_72064951_72065131_72069407_72069499_72071770_72071822_72072577_72072666_72073071_72073137_72083283_72083339_72086592
ENSMUSG00000049047.12_0	chrX	+	3301	5	FSM	ENSMUSG00000049047.12	ENSMUST00000081834.10	3327	5	10	16	-2	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	133657353	133662158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133657480_133658012_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUSG00000049047.12_11	chrX	+	1990	5	FSM	ENSMUSG00000049047.12	ENSMUST00000086880.11	2024	5	12	22	12	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACAACAGAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	133657367	133660833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133657480_133657984_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUSG00000049047.12_19	chrX	+	3462	5	FSM	ENSMUSG00000049047.12	ENSMUST00000086884.5	3488	5	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTTATTAAGTGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	133657407	133662190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133657635_133657984_133658092_133658480_133658543_133658825_133658896_133659194
ENSMUSG00000049076.13_0	chr16	-	6353	22	FSM	ENSMUSG00000049076.13	ENSMUST00000058033.9	6362	22	9	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGCTGTAAGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	31019972	30911232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30973390_30973511_30979148_30979207_31019756
ENSMUSG00000049076.13_5	chr16	-	3401	23	FSM	ENSMUSG00000049076.13	ENSMUST00000230614.2	3414	23	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATCTTGTGTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	31019967	30914233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_30915265_30920642_30920705_30922316_30922428_30923662_30923773_30924302_30924491_30925867_30925961_30926844_30927006_30928458_30928551_30929318_30929389_30929710_30929920_30934819_30934926_30936075_30936177_30938213_30938266_30946138_30946252_30950077_30950153_30952346_30952443_30955354_30955400_30958288_30958473_30960556_30960616_30972523_30972578_30973390_30973511_30979148_30979207_31019756
ENSMUSG00000049090.4_0	chr18	+	3388	2	FSM	ENSMUSG00000049090.4	ENSMUST00000060223.4	3430	2	15	27	15	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAACATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84106202	84115626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_84106499_84112534
ENSMUSG00000049091.8_0	chr7	-	2163	1	FSM	ENSMUSG00000049091.8	ENSMUST00000082428.6	2177	1	10	4	10	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	607	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGTGGCTAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	126873217	126871054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126871100_126873200
ENSMUSG00000049093.10_0	chr6	-	2464	11	FSM	ENSMUSG00000049093.10	ENSMUST00000118364.2	2488	11	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCAAAACATGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	67468815	67399915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_67400988_67403558_67403650_67408589_67408693_67411588_67411676_67429280_67429498_67443258_67443405_67450780_67450942_67455930_67456055_67463079_67463377_67467650_67467754_67468752
ENSMUSG00000049093.10_1	chr6	-	2397	10	ISM	ENSMUSG00000049093.10	ENSMUST00000118364.2	2488	11	1090	0	1090	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCAAAACATGAATATT	NA	NA	NA	NA	NA	NA	NA	NA	67467749	67399915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_67400988_67403558_67403650_67408589_67408693_67411588_67411676_67429280_67429498_67443258_67443405_67450780_67450942_67455930_67456055_67463079_67463377_67467650
ENSMUSG00000049098.5_0	chr9	+	5349	2	FSM	ENSMUSG00000049098.5	ENSMUST00000214648.3	5356	2	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATACATTCAGATCCAC	NA	NA	NA	NA	NA	NA	NA	NA	38312995	38319288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_38313221_38314164
ENSMUSG00000049106.8_0	chr12	-	5679	9	FSM	ENSMUSG00000049106.8	ENSMUST00000054145.8	5706	9	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTCTCCCTGCCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	80483355	80382628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482958
ENSMUSG00000049106.8_1	chr12	-	4627	9	FSM	ENSMUSG00000049106.8	ENST00000554215.5	4650	9	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATACAAAAAAAGTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	80482750	80383468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80387051_80395093_80395222_80410777_80410845_80423291_80423506_80444426_80444557_80445542_80445683_80446722_80446760_80451328_80451473_80482565
ENSMUSG00000049109.16_1	chr10	+	2808	5	FSM	ENSMUSG00000049109.16	ENST00000368248.4	2824	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACTGAGAATTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	28598477	28757953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_28598633_28637150_28637610_28657686_28658739_28739295_28739431_28756946
ENSMUSG00000049119.15_0	chr4	+	3202	3	FSM	ENSMUSG00000049119.15	ENSMUST00000054857.13	3210	3	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCTGATTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5644127	5801100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_5644411_5729570_5729658_5798268
ENSMUSG00000049119.15_1	chr4	+	3099	3	FSM	ENSMUSG00000049119.15	ENSMUST00000108380.2	3119	3	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTACCTGTGCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	5724323	5801093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_5724511_5729570_5729658_5798268
ENSMUSG00000049119.15_2	chr4	+	1736	2	FSM	ENSMUSG00000049119.15	ENSMUST00000171403.2	1754	2	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAGGAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5772892	5799942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_5772955_5798268
ENSMUSG00000049122.18_0	chr4	+	2612	13	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	8	3421	8	-1046	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	837	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCTTTATGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	73992286	74107119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_73992387_74016338_74016382_74038035_74038115_74046435_74046534_74054064_74054189_74063270_74063359_74071803_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_16	chr4	+	2513	12	ISM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	24059	3421	24059	-1046	internal_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCTTTATGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	74016337	74107119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_74016382_74038035_74038115_74046435_74046534_74054064_74054189_74063270_74063359_74071803_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550
ENSMUSG00000049122.18_2	chr4	+	2630	14	FSM	ENSMUSG00000049122.18	ENST00000304195.8	2639	14	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTACATTTGTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	73992287	74110540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_73992387_74016338_74016382_74038035_74038115_74046435_74046534_74054064_74054189_74063270_74063359_74071803_74071893_74077480_74077545_74078603_74078693_74079935_74080011_74080285_74080355_74088874_74089000_74105550_74107120_74110521
ENSMUSG00000049133.8_0	chr3	+	2662	3	FSM	ENSMUSG00000049133.8	ENST00000388718.5	2668	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGGGAATGGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	93104584	93110557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_93104636_93107489_93107655_93108111
ENSMUSG00000049133.8_1	chr3	+	2604	2	ISM	ENSMUSG00000049133.8	ENST00000388718.5	2668	3	2912	6	-20	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGGGAATGGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	93107496	93110557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_93107655_93108111
ENSMUSG00000049134.16_0	chr19	-	5454	41	FSM	ENSMUSG00000049134.16	ENST00000369360.7	5465	41	9	2	3	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACCCTGATGGTATGGAC	NA	NA	NA	NA	NA	NA	NA	NA	56378440	56308409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457_56323770_56324474_56324583_56324913_56325019_56326468_56326568_56328950_56329056_56330570_56330769_56332443_56332558_56333092_56333201_56333891_56333997_56335560_56335660_56338720_56338826_56339863_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352480_56352729_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416_56374516_56377180_56377269_56377821_56377917_56378237
ENSMUSG00000049134.16_42	chr19	-	5203	40	FSM	ENSMUSG00000049134.16	ENSMUST00000095947.11	5214	40	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGCGAGTGTTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56378461	56308562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_56308735_56309316_56309449_56310154_56310467_56312319_56312428_56315626_56315732_56316932_56317032_56317427_56317533_56323457_56323770_56324474_56324583_56324913_56325019_56326468_56326568_56328950_56329056_56330570_56330769_56332443_56332558_56333092_56333201_56333891_56333997_56335560_56335660_56338720_56338826_56339863_56340176_56342551_56342660_56343913_56344019_56345722_56345822_56349543_56349649_56350085_56350284_56352357_56352460_56352733_56352842_56353823_56353929_56354806_56354906_56360254_56360360_56361238_56361347_56366486_56366604_56367491_56367597_56368247_56368350_56368637_56368746_56369931_56370037_56370691_56370797_56372490_56372596_56374416_56374516_56377180_56377269_56378237
ENSMUSG00000049148.9_0	chr15	+	1822	3	FSM	ENSMUSG00000049148.9	ENSMUST00000061925.5	1851	3	23	6	23	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTGAGTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	4405008	4605029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_4405298_4546100_4546810_4604205
ENSMUSG00000049164.8_1	chr19	+	6482	2	FSM	ENSMUSG00000049164.8	ENST00000624776.3	6485	2	0	3	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40883173	40906385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40883212_40899941
ENSMUSG00000049164.8_8	chr19	+	6435	1	ISM	ENSMUSG00000049164.8	ENSMUST00000050092.7	6840	5	16802	6	3348	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGAGAGTTTCTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	40899950	40906385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_40900000_40906400
ENSMUSG00000049225.15_0	chr4	-	4183	2	FSM	ENSMUSG00000049225.15	ENSMUST00000108297.3	4201	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTATAATGTGAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	11966441	11958190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11962234_11966301
ENSMUSG00000049232.4_0	chr6	+	2990	2	FSM	ENSMUSG00000049232.4	ENSMUST00000062626.4	3007	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAATTTTGATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	59185863	59189010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_59186167_59186323
ENSMUSG00000049252.18_0	chr2	-	15265	89	FSM	ENSMUSG00000049252.18	ENST00000389484.8	15286	89	11	10	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1095	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTAAGTGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	41850779	40485265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_40487087_40488424_40488524_40490265_40490411_40491516_40491608_40501443_40501521_40519618_40519724_40527717_40527893_40537098_40537261_40547375_40547541_40551462_40551589_40553627_40553802_40555084_40555202_40567502_40567610_40569003_40569228_40587361_40587604_40589523_40589644_40591768_40591904_40592722_40592861_40593825_40593952_40605383_40605507_40615393_40615527_40615859_40615967_40620708_40620839_40632773_40632881_40640911_40641029_40691403_40691524_40692902_40693023_40693186_40693304_40700684_40700779_40711597_40711747_40712518_40712708_40741642_40741843_40748413_40748596_40750661_40750785_40759126_40759213_40760232_40760417_40764974_40765163_40766553_40766695_40769476_40769600_40772151_40772281_40776652_40776773_40779233_40779357_40792988_40793139_40793377_40793492_40809147_40809268_40812303_40812433_40817212_40817339_40817841_40818035_40888064_40888270_40894579_40894770_41000765_41001138_41002270_41002396_41002695_41002848_41002979_41003107_41012922_41013053_41013610_41013746_41075881_41076014_41078824_41078951_41083549_41083691_41135951_41136102_41158348_41158444_41159166_41159342_41172048_41172277_41174106_41174239_41185476_41185722_41186007_41186173_41192816_41193022_41202487_41202686_41231702_41231949_41234429_41234631_41265845_41266026_41298242_41298415_41298913_41298995_41325528_41325646_41335112_41335239_41339197_41339339_41348311_41348435_41358833_41359024_41360953_41361174_41366646_41366828_41388176_41388414_41392010_41392155_41396656_41396829_41401416_41401640_41560912_41561076_41618564_41618823_41660856_41660986_41678969_41679090_41850652
ENSMUSG00000049281.17_0	chr9	+	1492	7	FSM	ENSMUSG00000049281.17	ENST00000299333.8	1506	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTCTTTTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	40180525	40200492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40180899_40181263_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049281.17_5	chr9	+	1776	6	FSM	ENSMUSG00000049281.17	ENST00000392770.6	1788	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTCTTTTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	40180606	40200492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40181344_40188363_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049281.17_8	chr9	+	1030	5	FSM	ENSMUSG00000049281.17	ENST00000657123.1	1046	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATTCTTTTCCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	40188372	40200492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40188528_40190670_40190897_40193719_40193859_40199669_40199755_40200067
ENSMUSG00000049285.5_0	chr5	+	1296	1	FSM	ENSMUSG00000049285.5	ENSMUST00000057773.5	1308	1	3	9	3	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGTCATACTGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	138192578	138193874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138192600_138193900
ENSMUSG00000049287.6_0	chr11	-	3996	3	FSM	ENSMUSG00000049287.6	ENSMUST00000054523.6	4021	3	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTATTCTGGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59054547	59046201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59049486_59049663_59050005_59054176
ENSMUSG00000049288.5_0	chr3	+	3294	6	FSM	ENSMUSG00000049288.5	ENSMUST00000062058.5	3312	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAGCCAGAATGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96508477	96533482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96508790_96521707_96521872_96525916_96526058_96528624_96528721_96529458_96529537_96530979
ENSMUSG00000049295.18_0	chr14	-	2794	5	FSM	ENSMUSG00000049295.18	ENSMUST00000226522.2	2804	5	3	7	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCTGTGTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52252036	52243540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52251962
ENSMUSG00000049295.18_2	chr14	-	2793	4	FSM	ENSMUSG00000049295.18	ENSMUST00000228580.2	2812	4	11	8	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACAAGGCCCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52258147	52243546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52257979
ENSMUSG00000049295.18_3	chr14	-	2918	5	FSM	ENSMUSG00000049295.18	ENSMUST00000067549.15	2933	5	7	8	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACAAGGCCCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52258183	52243546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52257979
ENSMUSG00000049295.18_4	chr14	-	3012	6	FSM	ENSMUSG00000049295.18	ENSMUST00000166169.4	3017	6	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCACAAGGCCCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52257144	52243546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52244605_52244820_52244953_52245684_52247120_52247426_52247516_52252404_52252510_52256951
ENSMUSG00000049299.15_0	chr11	+	740	5	FSM	ENSMUSG00000049299.15	ENSMUST00000102602.8	751	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTGCCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69214810	69216613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69214893_69214983_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUSG00000049299.15_3	chr11	+	717	4	FSM	ENSMUSG00000049299.15	ENSMUST00000102601.10	759	4	36	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTGCCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69214924	69216613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216264
ENSMUSG00000049299.15_5	chr11	+	602	4	FSM	ENSMUSG00000049299.15	ENSMUST00000060956.13	628	4	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTGCCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69214920	69216613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69215083_69215220_69215292_69215649_69215789_69216383
ENSMUSG00000049299.15_7	chr11	+	618	4	FSM	ENSMUSG00000049299.15	ENSMUST00000108662.2	635	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTCTGCTGCCTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69214993	69216613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69215083_69215220_69215292_69215679_69215789_69216264
ENSMUSG00000049300.12_0	chr3	-	3032	2	FSM	ENSMUSG00000049300.12	ENSMUST00000190378.2	3051	2	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTGTAACCTGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	110158290	110153427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_110155172_110157002
ENSMUSG00000049300.12_1	chr3	-	2426	1	FSM	ENSMUSG00000049300.12	ENSMUST00000106567.2	2450	1	11	13	6	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATTAAAACTAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	110158303	110155877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_110155900_110158300
ENSMUSG00000049303.11_0	chr19	-	3563	8	FSM	ENSMUSG00000049303.11	ENSMUST00000059295.10	3581	8	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGGCATACAGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	4527465	4495943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4497889_4500956_4501091_4502304_4502426_4503792_4504009_4506522_4506916_4510644_4510839_4517934_4517992_4526962
ENSMUSG00000049305.7_0	chr9	+	3084	2	FSM	ENSMUSG00000049305.7	ENSMUST00000061209.7	3092	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTGGAGAGATGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	108337733	108343137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108337817_108340136
ENSMUSG00000049305.7_3	chr9	+	3030	2	FSM	ENSMUSG00000049305.7	ENSMUST00000193170.2	3044	2	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGACCAATGGCACAG	NA	NA	NA	NA	NA	NA	NA	NA	108338632	108343005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108338794_108340136
ENSMUSG00000049305.7_4	chr9	+	2995	1	NIC	ENSMUSG00000049305.7	novel	3092	2	NA	NA	1517	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGCCAGGCTGGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108340135	108343130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_108340100_108343100
ENSMUSG00000049321.18_0	chr11	-	3058	6	FSM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTTGCCTTGGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	50806962	50789542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106_50803229_50806935
ENSMUSG00000049321.18_1	chr11	-	3012	5	ISM	ENSMUSG00000049321.18	ENSMUST00000116378.8	3069	6	3760	4	-1572	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGTTGCCTTGGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	50803209	50789542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_50792119_50796912_50796985_50801262_50801353_50801532_50801704_50803106
ENSMUSG00000049323.9_1	chr11	+	3231	2	FSM	ENSMUSG00000049323.9	ENSMUST00000056907.7	7391	2	390	3770	0	3450	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCACTGGAAAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	60668740	60675343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60671208_60674579
ENSMUSG00000049323.9_2	chr11	+	3242	3	FSM	ENSMUSG00000049323.9	ENST00000406438.5	3259	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGGTGAGGGCAGCG	NA	NA	NA	NA	NA	NA	NA	NA	60668751	60686677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60671208_60674579_60675344_60686655
ENSMUSG00000049323.9_3	chr11	+	3235	3	NNC	ENSMUSG00000049323.9	novel	3259	3	NA	NA	14	130	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATGCTCACAAGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	60668754	60686813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_60671208_60674579_60675344_60686795
ENSMUSG00000049327.18_0	chr5	+	2728	8	FSM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCACCTATGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	124577996	124600364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124578079_124584031_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUSG00000049327.18_2	chr5	+	2648	7	ISM	ENSMUSG00000049327.18	ENSMUST00000059580.11	2739	8	6037	7	474	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCACCTATGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	124584029	124600364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_124584148_124585276_124585434_124588723_124588944_124589348_124589437_124595121_124595182_124597837_124598029_124598550
ENSMUSG00000049339.17_0	chr1	+	2563	10	FSM	ENSMUSG00000049339.17	ENST00000430297.7	2581	10	8	10	-1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCAAAATATCAAAGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	75119436	75125822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75124547_75125802
ENSMUSG00000049339.17_3	chr1	+	2543	9	FSM	ENSMUSG00000049339.17	ENSMUST00000097694.11	2561	9	10	8	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCTGCCTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	75119439	75124549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073
ENSMUSG00000049339.17_6	chr1	+	2423	10	FSM	ENSMUSG00000049339.17	ENSMUST00000190240.7	2438	10	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAACTGCTGCCTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	75119448	75124549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_75119773_75120012_75120120_75120566_75120598_75120947_75121084_75121265_75121351_75121603_75121748_75121902_75121998_75122323_75122460_75123073_75123364_75123474
ENSMUSG00000049349.4_0	chr3	-	1657	4	FSM	ENSMUSG00000049349.4	ENSMUST00000053318.4	1665	4	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTTATGGCCTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	137773147	137754527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_137755458_137758207_137758339_137760058_137760192_137772684
ENSMUSG00000049354.9_0	chr11	+	5732	7	FSM	ENSMUSG00000049354.9	ENSMUST00000058438.9	5750	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGATTGAAATTTTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	105927704	105950139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105928088_105937516_105937676_105938462_105938575_105938968_105939088_105942582_105942793_105944556_105944675_105945508
ENSMUSG00000049354.9_1	chr11	+	1205	3	FSM	ENSMUSG00000049354.9	ENST00000415273.2	1217	3	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTAGACCCCACGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	105927772	105946280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105928088_105944556_105944675_105945508
ENSMUSG00000049382.11_0	chr15	-	1671	10	FSM	ENSMUSG00000049382.11	ENST00000552150.5	1680	10	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAATCCTCTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	101925654	101905268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332_101912702_101925589
ENSMUSG00000049382.11_1	chr15	-	1605	9	FSM	ENSMUSG00000049382.11	ENSMUST00000023952.10	1958	9	217	136	-26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAATCCTCTGGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	101912700	101905268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907374_101907865_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049382.11_3	chr15	-	1113	8	FSM	ENSMUSG00000049382.11	ENST00000557533.2	1128	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAATGGCCACTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	101910051	101905380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101905569_101906094_101906154_101906287_101906509_101906825_101906952_101907208_101907371_101907865_101907962_101909014_101909076_101909851
ENSMUSG00000049382.11_8	chr15	-	1246	8	FSM	ENSMUSG00000049382.11	ENST00000433288.2	1264	8	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGGTGAGAGTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101912661	101906100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101906154_101906287_101906509_101906825_101906952_101907208_101907356_101907861_101907962_101909014_101909076_101909851_101910061_101912332
ENSMUSG00000049396.7_0	chr11	-	3527	2	FSM	ENSMUSG00000049396.7	ENSMUST00000102500.5	3540	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTTATCTTGAGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	76108484	76101403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_76104750_76108303
ENSMUSG00000049401.11_0	chr2	+	2443	7	FSM	ENSMUSG00000049401.11	ENSMUST00000029087.4	2449	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGGCCGTGTTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	180231043	180237629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180231415_180232779_180232849_180233409_180233489_180234219_180234299_180234896_180234964_180235362_180235512_180236000
ENSMUSG00000049411.16_0	chr18	-	2577	15	FSM	ENSMUSG00000049411.16	ENSMUST00000055447.14	2597	15	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAAATTGTCTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	12254558	12115001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12116700_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ENSMUSG00000049411.16_1	chr18	-	1416	15	FSM	ENSMUSG00000049411.16	ENSMUST00000209859.2	1426	15	8	2	-8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAAAACAAGACATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	12254579	12116134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12116651_12126620_12126686_12176270_12176365_12180621_12180692_12191982_12192018_12197260_12197297_12200116_12200163_12201354_12201404_12203136_12203189_12207674_12207701_12217048_12217127_12237155_12237238_12246451_12246530_12251460_12251508_12254437
ENSMUSG00000049421.14_0	chr7	+	4002	3	FSM	ENSMUSG00000049421.14	ENSMUST00000050735.12	4006	3	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTTGTTGTTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29794221	29807046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29794637_29798952_29799148_29803654
ENSMUSG00000049421.14_1	chr7	+	3596	3	FSM	ENSMUSG00000049421.14	ENSMUST00000108200.2	3604	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCCTGTCCTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	29794609	29807031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29794637_29798952_29799148_29803657
ENSMUSG00000049421.14_2	chr7	+	3570	2	ISM	ENSMUSG00000049421.14	ENSMUST00000108200.2	3604	3	4342	8	4342	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCCTGTCCTGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	29798951	29807031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_29799148_29803657
ENSMUSG00000049422.8_1	chr10	+	435	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	0	143	0	-143	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCATTCTGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75771784	75773290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75771839_75772071_75772280_75773117
ENSMUSG00000049422.8_2	chr10	+	452	4	FSM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGCTGTGGGCCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	75771784	75773427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75771839_75772071_75772280_75773117_75773289_75773408
ENSMUSG00000049422.8_4	chr10	+	376	2	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	292	143	292	-143	internal_fragment	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCATTCTGGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	75772076	75773290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75772280_75773117
ENSMUSG00000049422.8_5	chr10	+	390	3	ISM	ENSMUSG00000049422.8	ENST00000401675.7	458	4	295	6	295	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGGCTGTGGGCCTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	75772079	75773427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_75772280_75773117_75773289_75773408
ENSMUSG00000049439.14_0	chr1	+	2205	13	FSM	ENSMUSG00000049439.14	ENSMUST00000060608.13	2223	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTATTTGGAGGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	60382493	60427213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60382617_60391279_60391330_60392067_60392235_60393672_60393816_60402348_60402517_60405807_60405887_60410379_60410496_60411748_60411804_60415225_60415347_60418532_60418645_60421562_60421628_60426063_60426154_60426297
ENSMUSG00000049470.14_0	chr11	+	10094	21	FSM	ENSMUSG00000049470.14	ENSMUST00000060945.12	10099	21	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTGCCTCTGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	53241664	53312657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_53241957_53259486_53259614_53263104_53263885_53266415_53266461_53271412_53271500_53280581_53280619_53283597_53283644_53287365_53287421_53288658_53288697_53289063_53289227_53290415_53291334_53293304_53293394_53295182_53295430_53297407_53297503_53298706_53298771_53298883_53299021_53299225_53299298_53300094_53300189_53301742_53301787_53302662_53302884_53306214
ENSMUSG00000049482.17_0	chr8	+	3047	15	FSM	ENSMUSG00000049482.17	ENSMUST00000116412.8	3066	15	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCGGCTGTGCCGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123202893	123209824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123203035_123203253_123203329_123203644_123203724_123203915_123203976_123204923_123204985_123205415_123205526_123205631_123205934_123206015_123206152_123206328_123206461_123206881_123206974_123207640_123207745_123207824_123207964_123208069_123208137_123208209_123208269_123208334
ENSMUSG00000049488.15_0	chr4	-	3427	28	FSM	ENSMUSG00000049488.15	ENSMUST00000050686.10	3456	28	21	8	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAAATTTTGGTTTGCG	NA	NA	NA	NA	NA	NA	NA	NA	12087936	12039362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12063673_12063831_12068867_12068934_12069413_12069492_12070236_12070346_12070448_12070604_12073893_12073957_12075454_12075530_12075622_12075693_12077335_12077436_12079874_12079969_12085911_12086001_12087714
ENSMUSG00000049488.15_4	chr4	-	2089	18	FSM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAGGCAAACATACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	12085996	12039601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12079874_12079969_12085911
ENSMUSG00000049488.15_5	chr4	-	2005	17	ISM	ENSMUSG00000049488.15	ENST00000453906.6	2102	18	6033	7	6033	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAGGCAAACATACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	12079969	12039601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_12039893_12040634_12040778_12043464_12043568_12045794_12045900_12046002_12046120_12047197_12047315_12047809_12047891_12051387_12051529_12053446_12053587_12053674_12053775_12054745_12054833_12055030_12055130_12057315_12057415_12058520_12058578_12061754_12061861_12063034_12063159_12079874
ENSMUSG00000049489.6_0	chr11	-	1206	1	FSM	ENSMUSG00000049489.6	ENSMUST00000059468.6	1224	1	12	6	12	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	495	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGCACCAGAGTCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	78642543	78641337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78641300_78642500
ENSMUSG00000049502.18_0	chr16	-	5271	5	FSM	ENSMUSG00000049502.18	ENSMUST00000081933.14	5309	5	28	10	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACAGACTGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	35759493	35746890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35749739_35751742_35751961_35752645_35754170_35756746_35756998_35759063
ENSMUSG00000049502.18_1	chr16	-	2635	3	FSM	ENSMUSG00000049502.18	ENSMUST00000114885.3	2649	3	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCACCACCTGGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	35759517	35752239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_35754170_35756746_35756998_35759063
ENSMUSG00000049504.13_0	chr3	+	4463	13	FSM	ENSMUSG00000049504.13	ENSMUST00000058577.5	4472	13	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACGGATATCACAAACTATAG	NA	NA	NA	NA	NA	NA	NA	NA	53371086	53389167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_53371741_53374522_53374589_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ENSMUSG00000049504.13_1	chr3	+	3991	12	FSM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATCTTAGGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53371642	53389317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_53371741_53376901_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ENSMUSG00000049504.13_3	chr3	+	3897	11	ISM	ENSMUSG00000049504.13	ENST00000625998.2	4009	12	5267	6	5267	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCTTAGGAAAAAGAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	53376899	53389319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_53376971_53377693_53377789_53378844_53378939_53379396_53379508_53380904_53380989_53382108_53382188_53382735_53382832_53383077_53383123_53384903_53386588_53386980_53387132_53387932
ENSMUSG00000049515.13_0	chr1	+	2060	2	ISM	ENSMUSG00000049515.13	ENSMUST00000176156.2	2886	8	20452	-286	12	286	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2319	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAATGGCTCAGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	91270306	91273945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_91270458_91272036
ENSMUSG00000049516.10_0	chr7	-	5202	6	FSM	ENSMUSG00000049516.10	ENSMUST00000061639.10	5223	6	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGATATTTTTACTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46658145	46640150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46643135_46644312_46644391_46645764_46645934_46647219_46648753_46649518_46649634_46657822
ENSMUSG00000049517.9_0	chr13	+	922	4	FSM	ENSMUSG00000049517.9	ENSMUST00000051955.9	937	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	12419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGACCTGGTCTATAGGA	NA	NA	NA	NA	NA	NA	NA	NA	91071086	91073064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_91071319_91071705_91071866_91072444_91072566_91072655
ENSMUSG00000049521.3_0	chr15	+	2547	3	FSM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACCTTGACCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	78726830	78735091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78726926_78731294_78732020_78733364
ENSMUSG00000049521.3_2	chr15	+	2454	2	ISM	ENSMUSG00000049521.3	ENSMUST00000059619.3	2560	3	4469	6	4469	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGACCTTGACCTTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	78731292	78735091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_78732020_78733364
ENSMUSG00000049532.12_0	chr14	-	4747	2	FSM	ENSMUSG00000049532.12	ENSMUST00000135523.5	4773	2	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCCTTATTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	52553754	52548628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52553121_52553499
ENSMUSG00000049536.6_0	chrX	+	2799	2	FSM	ENSMUSG00000049536.6	ENSMUST00000055104.6	2803	2	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTACTATAACAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	135608733	135612226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135608838_135609531
ENSMUSG00000049537.11_0	chr5	-	2340	12	FSM	ENSMUSG00000049537.11	ENSMUST00000053543.11	2350	12	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATATATTAAAAGGAATC	NA	NA	NA	NA	NA	NA	NA	NA	83503037	83425996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_83427189_83427888_83427935_83428357_83428444_83432067_83432126_83437834_83437879_83439086_83439160_83442420_83442527_83448696_83448813_83457049_83457154_83461130_83461176_83486095_83486148_83502619
ENSMUSG00000049538.15_0	chr13	-	4970	23	FSM	ENSMUSG00000049538.15	ENSMUST00000080145.13	4981	23	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACCACTTCATGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	70989919	70875920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_70877087_70878210_70878359_70883768_70883994_70886608_70886804_70886897_70887100_70901292_70901420_70911533_70911673_70915916_70916162_70916718_70916843_70918271_70918403_70920101_70920275_70920999_70921149_70925507_70925604_70927638_70927793_70935145_70935284_70939914_70940021_70941184_70941345_70943568_70943653_70945956_70946157_70948902_70949165_70984166_70984499_70989387_70989491_70989608
ENSMUSG00000049550.18_0	chr5	-	5608	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111564.8	5609	24	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	123822384	123715857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ENSMUSG00000049550.18_1	chr5	-	6126	24	FSM	ENSMUSG00000049550.18	ENSMUST00000111566.9	6133	24	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	123822674	123715857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ENSMUSG00000049550.18_18	chr5	-	5882	25	FSM	ENSMUSG00000049550.18	ENSMUST00000111561.8	5883	25	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGTCTCTTTGGTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	123822338	123715870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956_123794150_123822314
ENSMUSG00000049550.18_19	chr5	-	5847	24	ISM	ENSMUSG00000049550.18	ENSMUST00000111561.8	5883	25	28193	8	-64	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGGGTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	123794145	123715877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956
ENSMUSG00000049550.18_2	chr5	-	5531	23	ISM	ENSMUSG00000049550.18	ENSMUST00000111564.8	5609	24	28243	0	-61	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTTGGTTGGTTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	123794142	123715857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768515_123769233_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956
ENSMUSG00000049550.18_22	chr5	-	4370	25	FSM	ENSMUSG00000049550.18	ENSMUST00000031382.14	4387	25	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACGCCGGCTCCTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	123794066	123717308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123717566_123718062_123718188_123720782_123720833_123721346_123721498_123721583_123721702_123728855_123728909_123741661_123741783_123747301_123747409_123749884_123750002_123755398_123755615_123755719_123755886_123759858_123760016_123760818_123760903_123761275_123761334_123765356_123765474_123768287_123769233_123773236_123773342_123777018_123777052_123778556_123778618_123779840_123779945_123780481_123780680_123784145_123784369_123785903_123786029_123791514_123792084_123793956
ENSMUSG00000049551.3_0	chr5	-	2292	1	FSM	ENSMUSG00000049551.3	ENSMUST00000062572.3	2293	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGTGTTCTATCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135280083	135277791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135277800_135280100
ENSMUSG00000049553.12_0	chr6	+	9204	34	FSM	ENSMUSG00000049553.12	ENSMUST00000055296.11	9216	34	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACAAAGGATCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	71886052	71959455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71886224_71889859_71890065_71892004_71892155_71894725_71894834_71897425_71897512_71897632_71897737_71901573_71901682_71903267_71903374_71903632_71903796_71906292_71906464_71906648_71906772_71908577_71908809_71913279_71913535_71918330_71918523_71925333_71925484_71926323_71926508_71927563_71927647_71927746_71927906_71929969_71930069_71931676_71931830_71938507_71938591_71940657_71940824_71941649_71941872_71942539_71942755_71943359_71943528_71944295_71944432_71944842_71945001_71949681_71949809_71951084_71951196_71951727_71952004_71953002_71953204_71954317_71954436_71954927_71955093_71955398
ENSMUSG00000049555.11_0	chr9	-	516	3	FSM	ENSMUSG00000049555.11	ENST00000644830.1	528	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGTAGGGACAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	110699807	110695776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110696026_110696507_110696666_110699698
ENSMUSG00000049562.7_0	chr19	+	2778	3	FSM	ENSMUSG00000049562.7	ENSMUST00000235575.2	2785	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTACTCCTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5618052	5621282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5618112_5618467_5618636_5618731
ENSMUSG00000049562.7_1	chr19	+	3031	2	FSM	ENSMUSG00000049562.7	ENSMUST00000096318.4	3092	2	54	7	54	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACTACTCCTCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5618155	5621282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5618636_5618731
ENSMUSG00000049565.17_0	chr3	+	2595	12	FSM	ENSMUSG00000049565.17	ENSMUST00000133931.9	2603	12	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATTGGATATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	108646977	108689621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108647169_108658865_108659966_108663771_108663812_108664056_108664203_108664556_108664620_108672425_108672554_108679225_108679324_108682292_108682416_108682501_108682610_108685541_108685621_108688436_108688567_108689232
ENSMUSG00000049577.16_0	chr8	+	3367	10	FSM	ENSMUSG00000049577.16	ENSMUST00000054052.15	3390	10	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTCGCTGGAGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	123008897	123063985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123009262_123032096_123032220_123034230_123034381_123050438_123050573_123058828_123058929_123060459_123060667_123061190_123061422_123061670_123061767_123061851_123061999_123062170
ENSMUSG00000049580.13_0	chr7	-	2560	2	ISM	ENSMUSG00000049580.13	ENSMUST00000165901.8	2514	3	616	-109	616	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGAACTAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98008670	97999883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_98002338_98008564
ENSMUSG00000049580.13_1	chr7	-	2611	3	FSM	ENSMUSG00000049580.13	ENSMUST00000164726.8	2620	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGAACTAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98010495	97999883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98002338_98008564_98008675_98010448
ENSMUSG00000049580.13_2	chr7	-	2565	2	FSM	ENSMUSG00000049580.13	ENSMUST00000167405.3	2597	2	23	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGAACTAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98010476	97999883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98002338_98010365
ENSMUSG00000049580.13_3	chr7	-	2495	2	FSM	ENSMUSG00000049580.13	ENSMUST00000165257.8	2514	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTGAACTAGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	98010525	97999883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98002338_98010484
ENSMUSG00000049580.13_5	chr7	-	2303	2	FSM	ENSMUSG00000049580.13	ENSMUST00000206414.2	2310	2	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGTAAGACTCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	98010493	98000079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98002338_98010448
ENSMUSG00000049583.16_0	chr7	+	1004	2	FSM	ENSMUSG00000049583.16	ENST00000534201.5	1026	2	12	10	-9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1971	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAGAAGGTATGTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	87233591	87252400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_87233749_87251553
ENSMUSG00000049600.9_0	chr7	-	3889	3	FSM	ENSMUSG00000049600.9	ENSMUST00000210282.2	3908	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTTGCTGTGTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12743715	12737831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12740308_12740950_12742257_12743608
ENSMUSG00000049604.4_0	chr11	+	2180	2	FSM	ENSMUSG00000049604.4	ENSMUST00000062709.4	2206	2	21	5	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAACCTTTCCCTCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96085162	96088268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96085873_96086798
ENSMUSG00000049606.17_0	chr5	-	5749	6	FSM	ENSMUSG00000049606.17	ENSMUST00000112696.8	5785	6	26	10	26	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	106844670	106764614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106786502_106814650_106814712_106844397
ENSMUSG00000049606.17_1	chr5	-	5679	7	FSM	ENSMUSG00000049606.17	ENSMUST00000112698.8	5689	7	3	7	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATTACAGTGCCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	106844693	106764614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_106766295_106767405_106767509_106782696_106783303_106783475_106784190_106784282_106786502_106814650_106814712_106844397
ENSMUSG00000049624.15_0	chr9	-	3222	11	FSM	ENSMUSG00000049624.15	ENSMUST00000052441.12	3236	11	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATTTTATGTGTATGG	NA	NA	NA	NA	NA	NA	NA	NA	78495314	78443774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484546_78485792_78485990_78495155
ENSMUSG00000049624.15_4	chr9	-	3088	11	FSM	ENSMUSG00000049624.15	ENSMUST00000117645.8	3114	11	20	6	20	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAATTTTTGTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	78495277	78443793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78445582_78448180_78448272_78460215_78460364_78464738_78464872_78466292_78466452_78467969_78468089_78478303_78478391_78481931_78482020_78484311_78484468_78485792_78485990_78495155
ENSMUSG00000049641.16_0	chr10	+	1629	3	FSM	ENSMUSG00000049641.16	ENSMUST00000163017.10	1650	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAAATGCTCTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	51898608	51904557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_51898900_51901152_51901460_51903526
ENSMUSG00000049641.16_1	chr10	+	1020	3	FSM	ENSMUSG00000049641.16	ENST00000352536.7	1039	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGGGACTTCGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51898759	51905757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_51898900_51901152_51901460_51905184
ENSMUSG00000049643.16_0	chr7	+	2682	10	FSM	ENSMUSG00000049643.16	ENSMUST00000067386.14	2701	10	14	5	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTTTTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	27252671	27281519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761
ENSMUSG00000049643.16_3	chr7	+	1984	11	FSM	ENSMUSG00000049643.16	ENSMUST00000187960.7	1989	11	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGTTTTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	27252710	27281519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27252779_27255838_27255960_27259976_27260029_27263910_27263999_27264084_27264200_27265071_27265154_27270988_27271127_27274015_27274166_27278137_27278209_27279761_27280117_27280775
ENSMUSG00000049657.10_0	chr4	-	4292	2	FSM	ENSMUSG00000049657.10	ENSMUST00000055028.9	4316	2	21	3	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACACGGTCTCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	45012373	44991244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44995387_45012223
ENSMUSG00000049657.10_1	chr4	-	4680	2	FSM	ENSMUSG00000049657.10	ENSMUST00000180217.2	4708	2	28	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACACGGTCTCCTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	45012384	44991244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44995387_45011846
ENSMUSG00000049657.10_2	chr4	-	3829	2	FSM	ENSMUSG00000049657.10	ENSMUST00000107817.3	3867	2	24	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAAGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	45012388	44992994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_44995387_45010951
ENSMUSG00000049658.14_16	chr13	-	1689	10	FSM	ENSMUSG00000049658.14	ENST00000380675.3	1704	10	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTCATCCTTGGAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	100240531	100214330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100214622_100215166_100215308_100220648_100220704_100225860_100225956_100228701_100228836_100229921_100230051_100234045_100234106_100234993_100235104_100235460_100235738_100240134
ENSMUSG00000049659.16_1	chr11	-	2772	9	FSM	ENSMUSG00000049659.16	ENSMUST00000146722.9	3763	9	10	981	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGACGCGTAGCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	20677597	20636064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20636199_20642464_20642589_20646750_20646832_20648312_20648374_20653710_20653834_20658680_20658738_20659619_20659747_20662163_20662316_20675684
ENSMUSG00000049670.10_0	chr19	-	1787	5	FSM	ENSMUSG00000049670.10	ENSMUST00000051772.10	1800	5	12	1	-3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTGTGTTATGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	42074784	42063381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42064695_42064893_42065004_42066403_42066519_42066922_42067023_42074635
ENSMUSG00000049670.10_4	chr19	-	581	4	FSM	ENSMUSG00000049670.10	ENST00000478953.1	601	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAGAATGACCTTGATG	NA	NA	NA	NA	NA	NA	NA	NA	42074768	42064461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42064695_42066403_42066519_42066922_42067023_42074635
ENSMUSG00000049672.16_0	chr17	+	3725	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112674.8	3743	3	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69690062	69697745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69690265_69692415_69692500_69694306
ENSMUSG00000049672.16_1	chr17	+	3616	3	FSM	ENSMUSG00000049672.16	ENSMUST00000062369.14	3625	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTTTTGTATTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	69690322	69697745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69690416_69692415_69692500_69694306
ENSMUSG00000049672.16_2	chr17	+	4343	3	FSM	ENSMUSG00000049672.16	ENSMUST00000112676.4	4358	3	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGGAATTCTAAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	69690836	69698181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_69691221_69692415_69692500_69694306
ENSMUSG00000049680.18_0	chr11	-	5080	6	FSM	ENSMUSG00000049680.18	ENSMUST00000093362.12	5089	6	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAGATACATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	5691149	5663424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5691096
ENSMUSG00000049680.18_1	chr11	-	2738	4	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	596	1	596	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGACTCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5676417	5665685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347
ENSMUSG00000049680.18_11	chr11	-	3957	6	FSM	ENSMUSG00000049680.18	ENSMUST00000120306.8	3972	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTATACTCAAATGACAG	NA	NA	NA	NA	NA	NA	NA	NA	5712361	5664975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5676830_5676858_5711880
ENSMUSG00000049680.18_13	chr11	-	3213	5	FSM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGACTCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5677003	5665685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676527_5676637
ENSMUSG00000049680.18_16	chr11	-	2789	5	FSM	ENSMUSG00000049680.18	ENST00000402306.7	2790	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTGTGACTCCAGGGCC	NA	NA	NA	NA	NA	NA	NA	NA	5691146	5665685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676419_5691096
ENSMUSG00000049680.18_18	chr11	-	216	4	FSM	ENSMUSG00000049680.18	ENST00000446958.1	222	4	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTATTCATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5691155	5672805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5672841_5673110_5673162_5676347_5676419_5691096
ENSMUSG00000049680.18_19	chr11	-	151	3	ISM	ENSMUSG00000049680.18	ENST00000336086.10	3224	5	601	7121	601	-4	internal_fragment	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGTATTCATTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	5676412	5672805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5672841_5673110_5673162_5676347
ENSMUSG00000049680.18_2	chr11	-	5520	5	FSM	ENSMUSG00000049680.18	ENSMUST00000170116.8	5528	5	0	8	0	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTTAGATACATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	5712376	5663424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5668264_5672801_5672841_5673110_5673162_5676347_5676411_5711848
ENSMUSG00000049686.15_0	chr5	+	1852	2	FSM	ENSMUSG00000049686.15	ENSMUST00000121652.8	1875	2	10	13	10	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTAATTAAAATATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	123153146	123168506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123153630_123167137
ENSMUSG00000049717.10_0	chr8	-	5004	2	FSM	ENSMUSG00000049717.10	ENSMUST00000095476.6	5028	2	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTAAATGACAACTAGAATC	NA	NA	NA	NA	NA	NA	NA	NA	10026283	10019056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_10023808_10026030
ENSMUSG00000049728.15_0	chr7	-	5764	3	FSM	ENSMUSG00000049728.15	ENSMUST00000054415.12	5768	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	127475996	127462218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127466536_127466927_127467597_127475218
ENSMUSG00000049728.15_1	chr7	-	3114	4	FSM	ENSMUSG00000049728.15	ENSMUST00000106263.8	3132	4	13	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAAGTTGGTACCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	127475939	127464893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127466536_127466927_127467597_127473848_127473931_127475218
ENSMUSG00000049728.15_2	chr7	-	2387	3	FSM	ENSMUSG00000049728.15	ENSMUST00000106261.8	2410	3	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCTGTCTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	127474800	127465169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127466536_127466927_127467597_127474448
ENSMUSG00000049728.15_3	chr7	-	3158	3	FSM	ENSMUSG00000049728.15	ENSMUST00000106262.2	3169	3	6	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCTGTCTTCTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	127475943	127465169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127466536_127466927_127467597_127474820
ENSMUSG00000049734.10_0	chr9	-	1079	2	FSM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGACTGCTTGCCGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108888802	108887005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108887997_108888714
ENSMUSG00000049734.10_1	chr9	-	978	1	ISM	ENSMUSG00000049734.10	ENSMUST00000061973.5	1084	2	814	10	331	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCACTGACTGCTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	108887988	108887010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_108887000_108888000
ENSMUSG00000049734.10_2	chr9	-	1045	2	FSM	ENSMUSG00000049734.10	ENSMUST00000112053.2	1054	2	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCACTGACTGCTTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	108888315	108887010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108887997_108888256
ENSMUSG00000049739.11_0	chr7	+	6302	3	FSM	ENSMUSG00000049739.11	ENSMUST00000050383.8	6310	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGCTACTGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	127476874	127485162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127477280_127477741_127483091_127484614
ENSMUSG00000049751.7_0	chr12	-	736	2	FSM	ENSMUSG00000049751.7	ENSMUST00000110620.2	757	2	13	8	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAGCCTTGTGTTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	69230747	69229512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69229940_69230438
ENSMUSG00000049751.7_1	chr12	-	422	1	FSM	ENSMUSG00000049751.7	ENSMUST00000110619.2	1276	1	847	7	820	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATACCAAGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69229940	69229518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69229500_69229900
ENSMUSG00000049751.7_2	chr12	-	514	2	FSM	ENSMUSG00000049751.7	ENSMUST00000054544.7	526	2	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATACCAAGCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69230849	69229518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69229940_69230756
ENSMUSG00000049755.15_0	chr11	-	2763	3	FSM	ENSMUSG00000049755.15	ENSMUST00000064786.12	2765	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGTGTCACTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58214170	58205939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58208361_58210149_58210417_58214095
ENSMUSG00000049755.15_1	chr11	-	2689	2	ISM	ENSMUSG00000049755.15	ENSMUST00000108829.8	3094	5	3522	-102	3522	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATAGTGTCACTTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	58210417	58205939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_58208361_58210149
ENSMUSG00000049755.15_2	chr11	-	2856	4	FSM	ENSMUSG00000049755.15	ENSMUST00000057836.12	2862	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCTCGTGGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58214149	58205955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58208361_58210149_58210417_58213425_58213556_58214095
ENSMUSG00000049755.15_3	chr11	-	2799	3	ISM	ENSMUSG00000049755.15	ENSMUST00000057836.12	2862	4	597	6	387	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGCTCGTGGTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	58213552	58205955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_58208361_58210149_58210417_58213425
ENSMUSG00000049755.15_5	chr11	-	3072	5	FSM	ENSMUSG00000049755.15	ENSMUST00000108829.8	3094	5	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTCCAAGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	58213917	58206041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58208361_58210149_58210417_58210692_58210781_58213394_58213556_58213680
ENSMUSG00000049760.7_0	chr17	-	737	4	FSM	ENSMUSG00000049760.7	ENSMUST00000052832.6	755	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1879	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGACCAGAAGTAGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	56916761	56914459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56914842_56915637_56915693_56915845_56916024_56916639
ENSMUSG00000049764.9_0	chr10	+	5086	2	FSM	ENSMUSG00000049764.9	ENSMUST00000061617.7	5097	2	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCCCAAAGAAAACAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	75868493	75879063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_75868584_75874067
ENSMUSG00000049775.17_0	chrX	-	749	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112172.4	768	3	10	9	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	8798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGATTGGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	165992301	165990097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_165990532_165990932_165991048_165992101
ENSMUSG00000049775.17_2	chrX	-	685	3	FSM	ENSMUSG00000049775.17	ENSMUST00000112176.8	698	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGATTGGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	165992139	165990097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_165990532_165990932_165991048_165992003
ENSMUSG00000049791.5_0	chr7	+	6701	2	FSM	ENSMUSG00000049791.5	ENSMUST00000058755.5	6720	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTGGTGTGTGCATTG	NA	NA	NA	NA	NA	NA	NA	NA	89053575	89062336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_89054180_89056239
ENSMUSG00000049792.7_0	chr12	-	2122	2	FSM	ENSMUSG00000049792.7	ENSMUST00000054636.7	2139	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATCTGTCCCCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	111679681	111675928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111677847_111679477
ENSMUSG00000049800.14_0	chr11	+	5628	2	FSM	ENSMUSG00000049800.14	ENSMUST00000093292.11	5647	2	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGAAACATGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	20493341	20603010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_20493761_20597801
ENSMUSG00000049800.14_1	chr11	+	5499	2	FSM	ENSMUSG00000049800.14	ENSMUST00000109586.3	5515	2	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGATGAAACATGCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	20581983	20603010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_20582274_20597801
ENSMUSG00000049804.10_0	chrX	+	7976	6	FSM	ENSMUSG00000049804.10	ENSMUST00000124226.3	7996	6	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGCAAAAGAAGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	133587276	133597495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133587387_133587896_133587975_133588765_133588856_133589198_133589282_133589568_133589654_133589965
ENSMUSG00000049807.17_2	chr11	+	5428	19	FSM	ENSMUSG00000049807.17	ENSMUST00000107601.8	5450	19	17	5	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGAACCAGTGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	97341002	97393221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97341192_97342217_97343371_97344690_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380940_97381959_97382057_97383876_97383909_97390934
ENSMUSG00000049807.17_7	chr11	+	1757	15	FSM	ENSMUSG00000049807.17	ENST00000621154.1	1769	15	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGTTAAGGGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	97344702	97382054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97344847_97345039_97345152_97345271_97345330_97347280_97347425_97354209_97354528_97355620_97355683_97355884_97356016_97356835_97356958_97357257_97357414_97361193_97361273_97365840_97365915_97366149_97366240_97366873_97367000_97380897_97380944_97381959
ENSMUSG00000049811.18_0	chr11	+	1919	4	FSM	ENSMUSG00000049811.18	ENSMUST00000172602.9	1935	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCACTAACCCCATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	22958354	22973716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22958627_22965658_22965885_22969999_22971134_22973429
ENSMUSG00000049811.18_1	chr11	+	1914	5	FSM	ENSMUSG00000049811.18	ENSMUST00000109557.10	1947	5	26	7	26	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTCAAGACATTCCTGACA	NA	NA	NA	NA	NA	NA	NA	NA	22958490	22973734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22958627_22963538_22963648_22965654_22965885_22969999_22971134_22973429
ENSMUSG00000049848.8_0	chr7	-	602	5	FSM	ENSMUSG00000049848.8	ENST00000358777.9	610	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCCTGCACAGAAGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	19620563	19612038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19612106_19612753_19612811_19615738_19615825_19616499_19616533_19620204
ENSMUSG00000049858.9_0	chr10	-	2480	4	FSM	ENSMUSG00000049858.9	ENSMUST00000054764.9	2497	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTATGACTGGAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	128509932	128505769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128507796_128507972_128508151_128508407_128508472_128509720
ENSMUSG00000049866.13_0	chr1	-	3978	1	FSM	ENSMUSG00000049866.13	ENSMUST00000159814.2	3997	1	10	9	10	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATCAAACAGTTGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	88629933	88625955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_88626000_88629900
ENSMUSG00000049871.15_2	chr16	-	5381	18	FSM	ENSMUSG00000049871.15	ENSMUST00000177551.2	5403	18	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAGTCTAAAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	3794484	3763483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416_3783167_3783263_3783504_3794192
ENSMUSG00000049871.15_3	chr16	-	3272	18	FSM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGGAAAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3784305	3765320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416_3783167_3783263_3783504_3784285
ENSMUSG00000049871.15_4	chr16	-	3240	17	ISM	ENSMUSG00000049871.15	ENST00000359128.10	3276	18	814	4	814	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGGAAAGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	3783491	3765320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_3765404_3765689_3765774_3766123_3766208_3766767_3766852_3767233_3767318_3770250_3770335_3770726_3770811_3771291_3771376_3771795_3771880_3772419_3772504_3773008_3773093_3775132_3775217_3776793_3776878_3777254_3777339_3780317_3780405_3781416_3783167_3783263
ENSMUSG00000049872.9_0	chr10	-	5310	2	FSM	ENSMUSG00000049872.9	ENSMUST00000069125.8	5323	2	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCATGGATTGGTCTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	33972506	33963814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33968512_33971893
ENSMUSG00000049878.14_0	chr4	-	6225	8	FSM	ENSMUSG00000049878.14	ENSMUST00000056635.13	6242	8	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACTTGTTTACTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	121072269	121003084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_121008220_121012052_121012195_121016388_121016526_121027814_121028018_121039802_121039936_121045411_121045494_121047300_121047456_121072031
ENSMUSG00000049881.14_0	chr1	+	1177	3	FSM	ENSMUSG00000049881.14	ENSMUST00000061537.12	1194	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTTTGCTGGCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	157239932	157247800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_157240696_157241313_157241366_157247438
ENSMUSG00000049882.11_0	chr12	-	1088	6	FSM	ENSMUSG00000049882.11	ENSMUST00000058639.11	1109	6	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCAAGTCTGAAGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	69629871	69624409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_69624715_69626679_69626785_69627891_69628012_69629049_69629120_69629293_69629405_69629494
ENSMUSG00000049892.8_0	chr11	-	1572	2	FSM	ENSMUSG00000049892.8	ENSMUST00000062405.8	1611	2	27	12	27	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACGGAAAATGGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	59855743	59854018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59855193_59855345
ENSMUSG00000049892.8_1	chr11	-	1175	2	FSM	ENSMUSG00000049892.8	ENST00000579152.1	1191	2	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTGTTGCCATGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	59855675	59854273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59855119_59855345
ENSMUSG00000049904.8_0	chr11	+	1555	4	FSM	ENSMUSG00000049904.8	ENSMUST00000059319.8	1568	4	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACATGTCATGCTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	22462091	22469225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22462584_22467187_22467292_22467407_22467522_22468380
ENSMUSG00000049907.9_0	chr5	+	1792	4	FSM	ENSMUSG00000049907.9	ENSMUST00000051937.9	1812	4	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAACAGACATCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	74355955	74360131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74356252_74356763_74356821_74357927_74358005_74358769
ENSMUSG00000049916.13_0	chr16	-	1133	7	FSM	ENSMUSG00000049916.13	ENSMUST00000231681.2	1156	7	23	0	-11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGTTGTATGTCCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	16942981	16931262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16931491_16935343_16935449_16935657_16935729_16936155_16936377_16938819_16938944_16939159_16939416_16942853
ENSMUSG00000049922.9_0	chr2	-	2641	3	FSM	ENSMUSG00000049922.9	ENSMUST00000125276.2	2668	3	21	6	21	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAACAAGATACAGC	NA	NA	NA	NA	NA	NA	NA	NA	92290862	92283117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92285120_92289011_92289536_92290747
ENSMUSG00000049929.8_0	chrX	+	4199	3	FSM	ENSMUSG00000049929.8	ENSMUST00000060576.8	4238	3	30	9	30	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGGTATTATACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	105964260	105977497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_105964596_105967683_105967786_105973735
ENSMUSG00000049932.4_0	chr9	+	1368	1	FSM	ENSMUSG00000049932.4	ENSMUST00000052686.4	1384	1	10	6	10	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	1485	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGTGGTTTAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	44246000	44247368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44246000_44247400
ENSMUSG00000049940.8_0	chr3	-	2991	3	FSM	ENSMUSG00000049940.8	ENSMUST00000058578.8	3007	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTGTACATTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	41037467	41020762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_41023160_41024714_41024871_41037029
ENSMUSG00000049950.7_0	chr2	-	1028	2	FSM	ENSMUSG00000049950.7	ENSMUST00000062672.7	1042	2	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTACATATATTCTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	3333678	3329997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_3330911_3333563
ENSMUSG00000049957.15_0	chr11	+	2762	6	FSM	ENSMUSG00000049957.15	ENSMUST00000058370.14	2778	6	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATCCATCAATGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	120348946	120355174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120349105_120349437_120349572_120350867_120351091_120352541_120352625_120352831_120352912_120353090
ENSMUSG00000049960.5_0	chr14	-	2556	3	FSM	ENSMUSG00000049960.5	ENSMUST00000061444.5	2572	3	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTCAAGTTTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	20443692	20439377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20441529_20441960_20442222_20443548
ENSMUSG00000049969.4_0	chr4	-	2958	2	FSM	ENSMUSG00000049969.4	ENSMUST00000054776.4	2977	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTATTTCCTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	11007663	10988667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_10991355_11007392
ENSMUSG00000049971.18_0	chr5	+	840	10	FSM	ENSMUSG00000049971.18	ENST00000537468.1	856	10	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGCTAGAGACGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	127727752	127784058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_127727853_127734150_127734203_127740353_127740443_127741715_127741773_127754268_127754365_127755154_127755205_127766900_127766945_127768053_127768175_127771290_127771390_127783926
ENSMUSG00000049985.16_0	chr13	+	2163	10	FSM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	1	24	1	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAATAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	112425447	112520510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_112425517_112454958_112455082_112459585_112459717_112463662_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217_112504883_112517662_112517756_112519952
ENSMUSG00000049985.16_2	chr13	+	2094	9	ISM	ENSMUSG00000049985.16	ENST00000504958.6	2188	10	29512	24	-29	-24	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAAAAATAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	112454958	112520510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_112455082_112459585_112459717_112463662_112463773_112472748_112472810_112492439_112492625_112499948_112500117_112504217_112504883_112517662_112517756_112519952
ENSMUSG00000050002.15_0	chr13	+	1891	3	FSM	ENSMUSG00000050002.15	ENSMUST00000226010.2	1898	3	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAACAAAACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	58305464	58309739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58305551_58307690_58307722_58307965
ENSMUSG00000050002.15_1	chr13	+	747	5	FSM	ENSMUSG00000050002.15	ENSMUST00000051490.15	764	5	8	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCACCACCATCGGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	58305470	58311751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58310651_58310696_58311246
ENSMUSG00000050002.15_2	chr13	+	1453	4	FSM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCTGTCTTTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	58305474	58312505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_58305551_58307690_58307722_58307965_58308053_58311246
ENSMUSG00000050002.15_4	chr13	+	1377	3	ISM	ENSMUSG00000050002.15	ENSMUST00000109868.4	1462	4	2223	2	2223	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATCTGTCTTTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	58307690	58312505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_58307722_58307965_58308053_58311246
ENSMUSG00000050014.9_0	chr15	-	2309	4	FSM	ENSMUSG00000050014.9	ENSMUST00000089465.6	2325	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTATTCAACCAAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	77480317	77468026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77470012_77472888_77473016_77476275_77476350_77480194
ENSMUSG00000050017.12_0	chr5	+	2744	11	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	2	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1012	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111478630	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_14	chr5	+	2617	10	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	0	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	300	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111478672	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111478700_111483360_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_20	chr5	+	2590	9	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	4688	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111483360	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050017.12_24	chr5	+	2675	10	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	4688	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111483360	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111483392_111486148_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_33	chr5	+	2646	9	NIC	ENSMUSG00000050017.12	novel	2761	12	NA	NA	7474	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111486146	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111533385_111533471_111534368
ENSMUSG00000050017.12_38	chr5	+	2556	8	NIC	ENSMUSG00000050017.12	novel	2632	11	NA	NA	7479	-7	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCCACCTGTGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	111486151	111536218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_111486295_111494348_111494441_111495646_111495722_111497356_111497441_111519177_111519256_111528057_111528169_111530853_111530977_111534368
ENSMUSG00000050022.17_0	chr5	+	856	4	FSM	ENSMUSG00000050022.17	ENST00000407112.1	875	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTACAAGGTGAGGCGG	NA	NA	NA	NA	NA	NA	NA	NA	140726949	140735075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140727343_140729771_140729940_140733897_140734027_140734909
ENSMUSG00000050029.8_0	chrX	-	3526	3	FSM	ENSMUSG00000050029.8	ENSMUST00000053593.8	3545	3	4	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAATTAAGAAAATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	50106891	50092803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_50095628_50103847_50104161_50106502
ENSMUSG00000050035.8_0	chr10	-	3387	2	FSM	ENSMUSG00000050035.8	ENSMUST00000059383.8	3402	2	1	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTGACAAAAGTAACTT	NA	NA	NA	NA	NA	NA	NA	NA	84938358	84932164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_84935353_84938159
ENSMUSG00000050043.17_0	chr2	-	2269	9	FSM	ENSMUSG00000050043.17	ENSMUST00000111665.8	2282	9	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84509160	84501660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194_84508519_84508986
ENSMUSG00000050043.17_1	chr2	-	1914	7	FSM	ENSMUSG00000050043.17	ENSMUST00000111664.8	1926	7	11	1	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84508451	84501660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506440_84506502_84508194
ENSMUSG00000050043.17_4	chr2	-	1971	8	FSM	ENSMUSG00000050043.17	ENSMUST00000053664.9	1977	8	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGCCTTGCTGTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	84508394	84501660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84502877_84503367_84503498_84503597_84503664_84503843_84503951_84505748_84505826_84506088_84506203_84506440_84506502_84508194
ENSMUSG00000050063.19_0	chr7	+	1085	7	FSM	ENSMUSG00000050063.19	ENSMUST00000107966.10	1095	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGACACAGAGCACAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	43473981	43481200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43474020_43474933_43475090_43475480_43475542_43476222_43476380_43477847_43478096_43478560_43478698_43480912
ENSMUSG00000050063.19_2	chr7	+	1053	6	FSM	ENSMUSG00000050063.19	ENSMUST00000107967.3	1172	6	113	6	113	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAGAGCACAGAACACTG	NA	NA	NA	NA	NA	NA	NA	NA	43474931	43481204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43475090_43475480_43475542_43476222_43476380_43477847_43478096_43478560_43478698_43480912
ENSMUSG00000050064.15_0	chr3	+	586	2	FSM	ENSMUSG00000050064.15	ENST00000400451.7	605	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCCTCACAAATGCGC	NA	NA	NA	NA	NA	NA	NA	NA	98335073	98335859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_98335303_98335502
ENSMUSG00000050079.11_0	chr8	+	3837	15	FSM	ENSMUSG00000050079.11	ENSMUST00000060389.10	3852	15	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAGATTTCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95328573	95386897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95329059_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_10	chr8	+	3348	14	ISM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	20772	6	20772	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAGATTTCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95349465	95386897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_4	chr8	+	2787	14	FSM	ENSMUSG00000050079.11	ENSMUST00000212729.2	2800	14	7	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGCAAGTTCAATCATGA	NA	NA	NA	NA	NA	NA	NA	NA	95328599	95386375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95329059_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050079.11_6	chr8	+	3391	15	FSM	ENSMUSG00000050079.11	ENSMUST00000211983.2	3397	15	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAGATTTCACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	95328693	95386897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95328733_95349461_95349964_95355683_95355737_95356377_95356491_95358683_95358811_95359733_95359793_95362052_95362120_95363251_95363384_95364890_95365007_95366150_95366295_95373211_95373324_95376380_95376484_95376822_95376976_95380854_95380960_95385331
ENSMUSG00000050085.6_0	chr7	-	2127	2	FSM	ENSMUSG00000050085.6	ENSMUST00000216570.2	2149	2	15	7	-12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGGACAAATTGTCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	103291894	103287664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103289397_103291499
ENSMUSG00000050088.10_0	chr17	+	2485	2	FSM	ENSMUSG00000050088.10	ENSMUST00000052691.9	2506	2	13	8	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGACAGACTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	15163458	15166190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15163582_15163828
ENSMUSG00000050088.10_1	chr17	+	2512	2	FSM	ENSMUSG00000050088.10	ENSMUST00000164837.3	2523	2	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGAGACAGACTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	15163493	15166187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15163582_15163763
ENSMUSG00000050088.10_2	chr17	+	1451	2	FSM	ENSMUSG00000050088.10	ENSMUST00000174004.2	1466	2	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATAAATCAACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	15163530	15165233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15163582_15163833
ENSMUSG00000050088.10_3	chr17	+	2409	1	NIC	ENSMUSG00000050088.10	novel	2506	2	NA	NA	241	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAAACCATTGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	15163771	15166180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_15163800_15166200
ENSMUSG00000050100.15_0	chr7	+	1535	3	FSM	ENSMUSG00000050100.15	ENSMUST00000183219.8	1546	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTGGAGGGATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	131150508	131158314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_131150616_131156034_131156304_131157155
ENSMUSG00000050107.3_0	chr11	-	2798	1	FSM	ENSMUSG00000050107.3	ENSMUST00000052140.3	2810	1	12	0	12	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGAGATTTGGCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	73029108	73026310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_73026300_73029100
ENSMUSG00000050132.14_0	chr11	-	4068	9	FSM	ENSMUSG00000050132.14	ENSMUST00000061174.7	4083	9	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTAAGGAAATGTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	78388572	78364123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78365859_78366032_78366155_78373982_78374173_78374259_78374363_78378048_78378285_78378389_78378482_78378741_78378955_78381392_78382012_78387814
ENSMUSG00000050144.14_0	chr3	-	3400	4	FSM	ENSMUSG00000050144.14	ENSMUST00000193433.6	3429	4	29	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCTGGCTTTTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	88332386	88317804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332152
ENSMUSG00000050144.14_2	chr3	-	3478	4	FSM	ENSMUSG00000050144.14	ENSMUST00000195657.6	3504	4	26	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAACTCTGGCTTTTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	88332393	88317805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332080
ENSMUSG00000050144.14_3	chr3	-	3556	4	FSM	ENSMUSG00000050144.14	ENSMUST00000057935.9	3577	4	15	6	-12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCTAAACTCTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	88332431	88317811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88320205_88323294_88323423_88327807_88328446_88332034
ENSMUSG00000050148.10_0	chrX	+	3313	1	FSM	ENSMUSG00000050148.10	ENSMUST00000060714.10	3344	1	6	25	6	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATAATAAAAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	152281228	152284541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152281200_152284500
ENSMUSG00000050150.17_0	chr3	+	1175	9	FSM	ENSMUSG00000050150.17	ENST00000394789.7	1191	9	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAACACAGCACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	135077661	135116983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135077777_135078879_135079023_135080034_135080163_135088446_135088623_135096182_135096290_135097860_135098011_135099720_135099830_135100604_135100742_135116873
ENSMUSG00000050164.12_0	chr15	+	1027	3	FSM	ENSMUSG00000050164.12	ENST00000381433.2	1047	3	10	10	-8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATAAACCCGGGGCTACCC	NA	NA	NA	NA	NA	NA	NA	NA	81119691	81122373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81120057_81121333_81121510_81121887
ENSMUSG00000050174.16_0	chr3	-	1140	5	FSM	ENSMUSG00000050174.16	ENSMUST00000052645.13	1155	5	10	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTGTTGTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	37473735	37459063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ENSMUSG00000050174.16_3	chr3	-	1243	5	FSM	ENSMUSG00000050174.16	ENSMUST00000146324.8	1264	5	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTGTTGTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	37474319	37459063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37459644_37463656_37463712_37466508_37466565_37470849_37471054_37473971
ENSMUSG00000050174.16_6	chr3	-	1037	5	FSM	ENSMUSG00000050174.16	ENSMUST00000099130.9	1070	5	23	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTGAACAAGATTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	37473716	37459144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_37459641_37463656_37463712_37466508_37466565_37470849_37471054_37473490
ENSMUSG00000050188.9_0	chr4	+	925	2	FSM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	9	9	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACACACGTCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	125990424	125992368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125990603_125991621
ENSMUSG00000050188.9_1	chr4	+	802	2	FSM	ENSMUSG00000050188.9	ENSMUST00000179323.2	808	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACACACGTCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	125990445	125992368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125990501_125991621
ENSMUSG00000050188.9_2	chr4	+	740	1	ISM	ENSMUSG00000050188.9	ENSMUST00000055575.8	943	2	1213	9	1183	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACACACGTCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	125991628	125992368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_125991600_125992400
ENSMUSG00000050192.9_0	chr3	+	5018	5	FSM	ENSMUSG00000050192.9	ENSMUST00000060500.9	5027	5	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTATATGTGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	28835425	28852987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_28835563_28836164_28836366_28836876_28836982_28847833_28847966_28848544
ENSMUSG00000050192.9_1	chr3	+	447	4	FSM	ENSMUSG00000050192.9	ENST00000474096.5	459	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGACAAGCCCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	28836169	28848598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_28836366_28836876_28836982_28847873_28847966_28848544
ENSMUSG00000050199.14_0	chr2	+	4951	17	FSM	ENSMUSG00000050199.14	ENSMUST00000111037.3	4988	17	28	9	28	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCAAGTTATTGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109748019	109844593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109748651_109820049_109820122_109821448_109821521_109826898_109827115_109827937_109828010_109829750_109829820_109830640_109830713_109830904_109830977_109831274_109831344_109832810_109832883_109833798_109833865_109834895_109834968_109836848_109836921_109837489_109837616_109838429_109838546_109838926_109839011_109841595
ENSMUSG00000050199.14_1	chr2	+	482	3	FSM	ENSMUSG00000050199.14	ENST00000480977.2	488	3	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGCTTAACCTTTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	109748458	109827116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_109748651_109801036_109801109_109826898
ENSMUSG00000050212.5_0	chr4	+	1677	3	FSM	ENSMUSG00000050212.5	ENSMUST00000052876.3	1689	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	126041548	126043667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126042425_126042676_126042839_126043028
ENSMUSG00000050212.5_1	chr4	+	1348	3	FSM	ENSMUSG00000050212.5	ENSMUST00000106152.3	1364	3	15	1	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGTCTCTCACTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	126041810	126043667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126042425_126042743_126042839_126043028
ENSMUSG00000050212.5_3	chr4	+	1117	2	FSM	ENSMUSG00000050212.5	ENSMUST00000106150.3	1144	2	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAAGGTAGTCTTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	126042340	126043647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126042839_126043028
ENSMUSG00000050213.7_0	chr4	+	2322	4	FSM	ENSMUSG00000050213.7	ENSMUST00000052183.7	2345	4	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCATTTTAGAGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	124960480	124967828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_124960746_124961882_124961986_124964899_124965484_124966458
ENSMUSG00000050229.4_0	chr1	+	7538	1	FSM	ENSMUSG00000050229.4	ENSMUST00000052455.4	7554	1	8	8	8	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCCAATCTCTTGTCATT	NA	NA	NA	NA	NA	NA	NA	NA	172204120	172211658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_172204100_172211700
ENSMUSG00000050240.17_0	chr16	+	6332	3	FSM	ENSMUSG00000050240.17	ENSMUST00000090190.14	6354	3	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGATGTGGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17051449	17081286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17051595_17072831_17072931_17075198
ENSMUSG00000050244.10_0	chr13	+	6772	45	FSM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	2	6	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATACAAACTGGTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	12410253	12453768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_12410352_12410620_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ENSMUSG00000050244.10_10	chr13	+	6677	44	ISM	ENSMUSG00000050244.10	ENSMUST00000059270.10	6780	45	368	4	368	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAAACTGGTATTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	12410619	12453770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_12410795_12411302_12411520_12413783_12413926_12415930_12416033_12416330_12416472_12417594_12417807_12418025_12418160_12419768_12419872_12420903_12421015_12421405_12421524_12422397_12422506_12423534_12423631_12424089_12424179_12425276_12425489_12426100_12426223_12426925_12427118_12428105_12428290_12428392_12428530_12429253_12429447_12430297_12430468_12430831_12430991_12432340_12432584_12432978_12433111_12435922_12436027_12436158_12436303_12436921_12437041_12437121_12437244_12438514_12438644_12439500_12439732_12441034_12441162_12441642_12441804_12444647_12444695_12445021_12445146_12445791_12445933_12446560_12446854_12447509_12447661_12448492_12448652_12448797_12448933_12449067_12449173_12449254_12449424_12449927_12450083_12450550_12450710_12452714_12452824_12453469
ENSMUSG00000050248.12_0	chr5	+	4065	20	FSM	ENSMUSG00000050248.12	ENSMUST00000056365.9	4091	20	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTATGTATAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	37495859	37582390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_37496072_37504783_37504853_37505931_37506119_37507682_37507793_37508464_37508519_37514743_37514879_37520860_37521001_37527867_37528193_37535526_37535767_37537753_37537930_37540421_37540582_37544028_37544484_37549336_37549542_37550423_37550541_37567577_37567806_37573070_37573292_37574748_37574837_37576467_37576671_37579181_37579284_37581752
ENSMUSG00000050270.13_0	chr11	+	1585	6	FSM	ENSMUSG00000050270.13	ENSMUST00000061786.6	1597	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAACAGCCAATTACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	66915985	66926132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66916098_66916734_66916765_66920791_66920853_66921887_66922012_66923006_66923067_66924934
ENSMUSG00000050288.7_0	chr11	+	3650	1	FSM	ENSMUSG00000050288.7	ENSMUST00000057893.7	3663	1	6	7	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCAGATCTAGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	102495227	102498877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102495200_102498900
ENSMUSG00000050299.9_0	chr16	-	500	1	FSM	ENSMUSG00000050299.9	ENSMUST00000052867.9	402	1	-56	-42	-56	42	mono-exon	FALSE	NA	NA	NA	NA	NA	700	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGAAAAAAAAAAAAAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	76200596	76200096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_76200100_76200600
ENSMUSG00000050310.10_0	chr15	+	7357	39	FSM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	4	8	2	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTGGGGGAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	6737865	6827857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_6737933_6738113_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ENSMUSG00000050310.10_12	chr15	+	7290	38	ISM	ENSMUSG00000050310.10	ENST00000296782.9	7369	39	252	8	250	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATACTGGGGGAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	6738113	6827857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_6738162_6764845_6764944_6773808_6773874_6774929_6775062_6780138_6780203_6785941_6786069_6788968_6789139_6793760_6793829_6794532_6794601_6797534_6797618_6798726_6798815_6799225_6799317_6799408_6799476_6799603_6799685_6801612_6801714_6803289_6803456_6804087_6804190_6804312_6804360_6805530_6805667_6806234_6806435_6806796_6806924_6807410_6807576_6807721_6807799_6808668_6808748_6811137_6811248_6811644_6811733_6812562_6812656_6813038_6813146_6813412_6813643_6815856_6816863_6817130_6817203_6818911_6819090_6820020_6820106_6821073_6821308_6823454_6823614_6823925_6824050_6825376_6825516_6825642
ENSMUSG00000050312.13_0	chr16	-	3791	6	FSM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTATGATGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62607125	62552813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150_62606261_62607033
ENSMUSG00000050312.13_1	chr16	-	3707	5	ISM	ENSMUSG00000050312.13	ENSMUST00000063089.12	3813	6	879	0	879	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGCCTTTTTTTGACC	NA	NA	NA	NA	NA	NA	NA	NA	62606261	62552806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_62555782_62589969_62590092_62591020_62591176_62596650_62596995_62606150
ENSMUSG00000050315.15_0	chr3	-	854	3	FSM	ENSMUSG00000050315.15	ENST00000448416.6	872	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGCTTGTGTGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	123029717	122873371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122873908_122914767_122914920_123029551
ENSMUSG00000050315.15_1	chr3	-	9190	4	FSM	ENSMUSG00000050315.15	ENSMUST00000198584.2	9203	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCCTCTGTTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	123029783	122900251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122908276_122910604_122911387_122914767_122914920_123029551
ENSMUSG00000050315.15_2	chr3	-	8111	2	FSM	ENSMUSG00000050315.15	ENSMUST00000051443.8	8121	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTCCTCTGTTGGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	122910691	122900251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122908276_122910604
ENSMUSG00000050321.4_0	chr18	+	2194	11	FSM	ENSMUSG00000050321.4	ENST00000583169.5	2210	11	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGCCTACGCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	86413764	86524874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_86414036_86416082_86416137_86416376_86416515_86422764_86423014_86479166_86479209_86479324_86479453_86491739_86491969_86512874_86512989_86516666_86517226_86518137_86518212_86524538
ENSMUSG00000050323.15_0	chr4	-	1068	9	FSM	ENSMUSG00000050323.15	ENSMUST00000058183.9	1082	9	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGTGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	11076195	11051049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11051226_11053431_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073143_11073244_11075979
ENSMUSG00000050323.15_6	chr4	-	668	7	FSM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTGAGTGCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11073236	11053436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199_11070323_11073139
ENSMUSG00000050323.15_8	chr4	-	572	6	ISM	ENSMUSG00000050323.15	ENST00000396111.6	684	7	2922	7	2922	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGGTGAGTGCTTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	11070323	11053436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_11053489_11059011_11059114_11060860_11060995_11062049_11062153_11066650_11066708_11070199
ENSMUSG00000050328.3_0	chr15	+	1013	2	FSM	ENSMUSG00000050328.3	ENSMUST00000055562.3	1031	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGCCAGGCCTTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	102845201	102847036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102845892_102846713
ENSMUSG00000050332.8_0	chrX	-	8477	2	FSM	ENSMUSG00000050332.8	ENSMUST00000084535.6	8496	2	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCACTAAAGTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	94488464	94463928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94472205_94488263
ENSMUSG00000050335.18_0	chr14	+	1403	6	FSM	ENSMUSG00000050335.18	ENSMUST00000142734.8	1419	6	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	14130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTTACAAAGGAAATACG	NA	NA	NA	NA	NA	NA	NA	NA	47611279	47623611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47611410_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_12	chr14	+	1060	6	FSM	ENSMUSG00000050335.18	ENSMUST00000146468.4	1072	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATACCCATCGCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47611430	47623249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47611580_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_16	chr14	+	1209	5	ISM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	5632	0	5557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCCTTTGATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	47616977	47623545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050335.18_5	chr14	+	1292	6	FSM	ENSMUSG00000050335.18	ENSMUST00000150290.9	1298	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCCTTTGATTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	47611351	47623545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47611437_47616979_47617002_47617509_47617876_47619052_47619142_47622058_47622225_47622981
ENSMUSG00000050345.10_0	chr13	-	1409	8	FSM	ENSMUSG00000050345.10	ENSMUST00000091569.7	1432	8	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATAGTAGGACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	61012275	60990434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_60990791_60992122_60992241_60992893_60993057_61000913_61001139_61001329_61001477_61001569_61001693_61002626_61002764_61012135
ENSMUSG00000050357.10_0	chr8	+	4067	37	FSM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTCTCTCCTCCTGCCG	NA	NA	NA	NA	NA	NA	NA	NA	106413195	106424773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ENSMUSG00000050357.10_12	chr8	+	4311	37	FSM	ENSMUSG00000050357.10	ENST00000334583.11	4329	37	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAACTTGAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106413196	106424807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106413284_106413377_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424192_106424274_106424499_106424578_106424662
ENSMUSG00000050357.10_40	chr8	+	3978	36	ISM	ENSMUSG00000050357.10	ENST00000545661.5	4075	37	187	4	187	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATCTCTCTCCTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106413376	106424771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_106413429_106414000_106414064_106414184_106414310_106414415_106414508_106414701_106414773_106414889_106414964_106415096_106415173_106415255_106415345_106415426_106415522_106415595_106415683_106415767_106415881_106415975_106416054_106416183_106416261_106416355_106416461_106416630_106416701_106416814_106416897_106417009_106417107_106417188_106417247_106417378_106417552_106417714_106417878_106417958_106418058_106418932_106419062_106419148_106419263_106419434_106419596_106419669_106419758_106419887_106420029_106420156_106420224_106420645_106420882_106421656_106421758_106421839_106422201_106422283_106422407_106423492_106423530_106423655_106423728_106423848_106424071_106424499_106424578_106424662
ENSMUSG00000050359.8_0	chr3	-	797	2	FSM	ENSMUSG00000050359.8	ENSMUST00000054599.8	806	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATACTTTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92393202	92391267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92392019_92393156
ENSMUSG00000050359.8_1	chr3	-	741	1	ISM	ENSMUSG00000050359.8	ENSMUST00000054599.8	806	2	1194	9	1194	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCATACTTTGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92392008	92391267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_92391300_92392000
ENSMUSG00000050370.6_0	chr19	-	1352	1	FSM	ENSMUSG00000050370.6	ENSMUST00000050562.6	1387	1	23	12	23	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAACAAGCATTAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	34452541	34451189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_34451200_34452500
ENSMUSG00000050373.14_1	chr2	+	2569	3	FSM	ENSMUSG00000050373.14	ENSMUST00000056181.7	2590	3	14	7	-12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGGAGACTTTGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164627924	164635723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164628245_164628617_164628776_164633632
ENSMUSG00000050373.14_2	chr2	+	1809	3	FSM	ENSMUSG00000050373.14	ENSMUST00000172577.8	1825	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACAAGCGTGCTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	164627920	164634966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164628245_164628617_164628769_164633632
ENSMUSG00000050373.14_8	chr2	+	1228	2	FSM	ENSMUSG00000050373.14	ENSMUST00000152471.2	1243	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	164627951	164629552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164628245_164628617
ENSMUSG00000050377.9_0	chr13	-	1514	9	FSM	ENSMUSG00000050377.9	ENST00000297015.7	1541	9	10	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGCTATGGCATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	112695766	112660436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_112660905_112662367_112662450_112663993_112664088_112666812_112666954_112668201_112668349_112669444_112669547_112670269_112670456_112677603_112677813_112695681
ENSMUSG00000050377.9_1	chr13	-	1431	8	ISM	ENSMUSG00000050377.9	ENST00000297015.7	1541	9	17962	17	17958	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGCTATGGCATGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	112677814	112660436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_112660905_112662367_112662450_112663993_112664088_112666812_112666954_112668201_112668349_112669444_112669547_112670269_112670456_112677603
ENSMUSG00000050377.9_13	chr13	-	1042	8	FSM	ENSMUSG00000050377.9	ENST00000359040.10	1053	8	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTACACGTTACTGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	112695765	112662370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_112662450_112663993_112664088_112666812_112666954_112668201_112668349_112669444_112669547_112670269_112670456_112677603_112677813_112695681
ENSMUSG00000050377.9_22	chr13	-	728	5	FSM	ENSMUSG00000050377.9	ENST00000396836.6	740	5	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGGCACATGGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	112695763	112668199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_112668349_112669444_112669547_112670269_112670456_112677603_112677813_112695681
ENSMUSG00000050379.16_0	chrX	-	3437	10	FSM	ENSMUSG00000050379.16	ENSMUST00000060474.14	3457	10	11	9	11	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACACACACCAAAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36253298	36174987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36176908_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050379.16_10	chrX	-	1819	10	FSM	ENSMUSG00000050379.16	ENSMUST00000115239.10	1845	10	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTTACAAAAGGGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	36253290	36178690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36179001_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050379.16_2	chrX	-	2572	11	FSM	ENSMUSG00000050379.16	ENST00000360156.11	2596	11	13	11	-1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAATGCTCAGTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	36253310	36175909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36176908_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050379.16_6	chrX	-	4657	11	FSM	ENSMUSG00000050379.16	ENSMUST00000053456.11	4673	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAATTAAACGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	36253301	36177106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36180199_36184021_36184067_36186492_36186684_36190434_36190568_36193751_36193921_36198036_36198134_36205707_36205870_36210220_36210408_36230248_36230445_36238715_36238831_36253031
ENSMUSG00000050382.15_5	chr7	-	4195	18	FSM	ENSMUSG00000050382.15	ENST00000394412.8	4215	18	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2506	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACTGGATTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	79363897	79348146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79348664_79348897_79349045_79349134_79349334_79349929_79350137_79350696_79350913_79351853_79352031_79352200_79352327_79352526_79352725_79354374_79354578_79356483_79356637_79356736_79356853_79357267_79357426_79358161_79358389_79358913_79359031_79359792_79360313_79360450_79360845_79361160_79361362_79363578
ENSMUSG00000050390.13_0	chr4	-	5036	7	FSM	ENSMUSG00000050390.13	ENSMUST00000106051.8	5049	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129121698	129113377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129121519
ENSMUSG00000050390.13_1	chr4	-	5004	7	FSM	ENSMUSG00000050390.13	ENSMUST00000097873.10	5033	7	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGCTGTGACTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	129132945	129113377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129115271_129115607_129118110_129118190_129118305_129119144_129119266_129119499_129119556_129119635_129119807_129132798
ENSMUSG00000050390.13_3	chr4	-	647	4	FSM	ENSMUSG00000050390.13	ENST00000294521.7	658	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCGGCCCCCAAGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	129119796	129114961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129115271_129119144_129119266_129119499_129119556_129119635
ENSMUSG00000050394.15_0	chrX	-	2009	4	FSM	ENSMUSG00000050394.15	ENSMUST00000052431.12	2024	4	6	9	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAATTAAACAGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	133652160	133649220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133650975_133651299_133651380_133651689_133651783_133652078
ENSMUSG00000050394.15_5	chrX	-	1784	3	FSM	ENSMUSG00000050394.15	ENST00000538627.5	1798	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGCAAGACAATTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	133652186	133649226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133649587_133649658_133650975_133652078
ENSMUSG00000050395.10_0	chr4	-	5796	4	FSM	ENSMUSG00000050395.10	ENSMUST00000239480.2	5828	4	21	11	21	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGGAGACTACAGAATT	NA	NA	NA	NA	NA	NA	NA	NA	63663329	63642850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_63648281_63651564_63651604_63652490_63652534_63663045
ENSMUSG00000050410.16_0	chr17	-	1652	4	FSM	ENSMUSG00000050410.16	ENSMUST00000161012.8	1665	4	8	5	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTGCGTTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	35827713	35823635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35824082_35825370_35825918_35826774_35827328_35827607
ENSMUSG00000050410.16_3	chr17	-	1645	3	ISM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	256	2	256	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTGCGTTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	35827426	35823635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_35824082_35825370_35825918_35826774
ENSMUSG00000050410.16_4	chr17	-	1724	4	FSM	ENSMUSG00000050410.16	ENSMUST00000160885.2	1732	4	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCACTTGCGTTGAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	35827676	35823635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35824082_35825370_35825918_35826774_35827437_35827607
ENSMUSG00000050428.8_0	chr7	+	4866	2	FSM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATGAAATAAAATTATAAA	NA	NA	NA	NA	NA	NA	NA	NA	18853785	18874092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18853862_18869302
ENSMUSG00000050428.8_1	chr7	+	2493	2	FSM	ENSMUSG00000050428.8	ENSMUST00000165913.2	2498	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTCAAACTACCAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	18865622	18871737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18865681_18869302
ENSMUSG00000050428.8_2	chr7	+	4783	1	ISM	ENSMUSG00000050428.8	ENSMUST00000053109.5	4873	2	15520	11	3686	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTGCACATGAAATAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	18869303	18874086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_18869300_18874100
ENSMUSG00000050447.16_0	chr2	+	3614	6	FSM	ENSMUSG00000050447.16	ENSMUST00000053208.14	3620	6	5	1	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGGCTTCTTCCTGCGAG	NA	NA	NA	NA	NA	NA	NA	NA	49956480	50083575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_49956597_50018381_50018547_50055480_50055670_50063612_50063712_50078722_50078854_50080661
ENSMUSG00000050471.18_0	chr9	-	1660	7	FSM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	2	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGACAGCCTTCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35179074	35128260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909_35156003_35179018
ENSMUSG00000050471.18_1	chr9	-	1602	6	ISM	ENSMUSG00000050471.18	ENSMUST00000063782.12	1662	7	23076	0	23073	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAGACAGCCTTCACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	35156000	35128260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35146526_35146780_35155909
ENSMUSG00000050471.18_5	chr9	-	1954	10	FSM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACCTAAGAGGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	35179073	35128323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35156436_35156492_35178332_35178408_35179018
ENSMUSG00000050471.18_7	chr9	-	1848	8	FSM	ENSMUSG00000050471.18	ENSMUST00000059057.14	1860	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACCTAAGAGGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	35179097	35128323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909_35156003_35179018
ENSMUSG00000050471.18_8	chr9	-	1770	7	ISM	ENSMUSG00000050471.18	ENSMUST00000121564.8	1962	10	23070	8	23070	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACCTAAGAGGCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	35156003	35128323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_35129044_35129224_35129285_35132675_35132962_35134909_35135039_35138459_35138688_35146526_35146780_35155909
ENSMUSG00000050493.9_0	chr4	-	887	2	FSM	ENSMUSG00000050493.9	ENSMUST00000052835.9	913	2	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCATCCTGTGTCACTG	NA	NA	NA	NA	NA	NA	NA	NA	129472323	129470614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129471089_129471910
ENSMUSG00000050503.10_0	chr9	-	4020	2	FSM	ENSMUSG00000050503.10	ENSMUST00000056890.10	4035	2	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAACATCAAATTGGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	66421886	66415666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66419301_66421500
ENSMUSG00000050530.15_0	chr2	+	4119	8	FSM	ENSMUSG00000050530.15	ENSMUST00000115099.9	4149	8	16	14	-15	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGGAAAAAAATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	3119434	3228829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ENSMUSG00000050530.15_1	chr2	+	3445	7	FSM	ENSMUSG00000050530.15	ENSMUST00000091505.11	3449	7	1	3	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCTAAGAGTCAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3119450	3228286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3119690_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3225854
ENSMUSG00000050530.15_2	chr2	+	4110	8	FSM	ENSMUSG00000050530.15	ENSMUST00000062934.7	4129	8	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGGAAAAAAATATGTG	NA	NA	NA	NA	NA	NA	NA	NA	3119726	3228829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_3119973_3179272_3179501_3187459_3187553_3198313_3198473_3203581_3203759_3221289_3221407_3224506_3224622_3225854
ENSMUSG00000050538.9_0	chr11	+	1160	2	FSM	ENSMUSG00000050538.9	ENSMUST00000170806.2	1118	2	-56	14	-37	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGTTAAAATAAACAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	97732088	97733855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97732403_97733009
ENSMUSG00000050538.9_1	chr11	+	2177	2	FSM	ENSMUSG00000050538.9	ENSMUST00000155954.3	2181	2	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAAACAAACAAATCT	NA	NA	NA	NA	NA	NA	NA	NA	97732129	97734925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97732391_97733009
ENSMUSG00000050541.15_0	chr11	-	3035	2	FSM	ENSMUSG00000050541.15	ENSMUST00000167574.2	3047	2	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTCCAGGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	43727147	43665432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_43667287_43725966
ENSMUSG00000050552.9_0	chr5	+	867	4	FSM	ENSMUSG00000050552.9	ENSMUST00000062067.8	877	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGTGTGCACAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	138253752	138257656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138254066_138254514_138254596_138256916_138257035_138257301
ENSMUSG00000050552.9_1	chr5	+	310	3	FSM	ENSMUSG00000050552.9	ENST00000460732.5	317	3	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATAAAAGGCACGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	138254517	138257398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138254596_138256916_138257052_138257301
ENSMUSG00000050552.9_2	chr5	+	231	2	ISM	ENSMUSG00000050552.9	ENST00000460732.5	317	3	2404	3	2404	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATAAAAGGCACGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	138256917	138257398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_138257052_138257301
ENSMUSG00000050555.10_0	chr9	-	1953	4	FSM	ENSMUSG00000050555.10	ENSMUST00000115110.5	1973	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGAGGAGTTTGAACCT	NA	NA	NA	NA	NA	NA	NA	NA	35481681	35472122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_35473401_35475358_35475474_35479750_35479802_35481172
ENSMUSG00000050565.17_1	chr1	+	6088	7	FSM	ENSMUSG00000050565.17	ENSMUST00000111757.10	6118	7	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATGAAAATGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155911166	155944595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155911855_155916820_155916881_155927039_155927370_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ENSMUSG00000050565.17_10	chr1	+	2518	2	FSM	ENSMUSG00000050565.17	ENSMUST00000065648.15	2529	2	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAAACCTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155916666	155929475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155916749_155927039
ENSMUSG00000050565.17_11	chr1	+	2575	3	FSM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAAACCTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155916669	155929475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155916749_155916820_155916881_155927039
ENSMUSG00000050565.17_13	chr1	+	2496	2	ISM	ENSMUSG00000050565.17	ENSMUST00000097526.3	2589	3	158	7	158	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAAACCTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155916820	155929475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_155916881_155927039
ENSMUSG00000050565.17_14	chr1	+	2436	1	NIC	ENSMUSG00000050565.17	novel	6118	7	NA	NA	10377	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGAAACCTGGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	155927039	155929475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_155927000_155929500
ENSMUSG00000050565.17_3	chr1	+	2478	3	FSM	ENSMUSG00000050565.17	ENSMUST00000111754.9	2491	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGACTCAGCAGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	155911479	155929270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155911667_155916820_155916881_155927039
ENSMUSG00000050565.17_7	chr1	+	2916	3	FSM	ENSMUSG00000050565.17	ENSMUST00000128941.8	2925	3	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAAACCTGGCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	155911882	155929477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155912301_155916820_155916881_155927039
ENSMUSG00000050565.17_9	chr1	+	5118	5	FSM	ENSMUSG00000050565.17	ENSMUST00000060404.5	5135	5	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTATGAAAATGGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	155916640	155944595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_155916749_155935156_155935334_155937333_155937916_155939338_155939441_155940446
ENSMUSG00000050567.17_0	chr11	-	5500	5	FSM	ENSMUSG00000050567.17	ENSMUST00000059458.5	5528	5	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATGGAAATCACAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	50183120	50146470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_50149656_50151803_50151901_50154076_50154311_50156421_50157838_50182552
ENSMUSG00000050578.11_0	chr9	+	2667	10	FSM	ENSMUSG00000050578.11	ENSMUST00000015394.10	2673	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGATATTACTATTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	7272513	7283325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7272678_7272764_7273007_7273892_7274042_7274208_7274335_7276546_7276709_7277910_7278029_7278830_7278965_7280125_7280286_7280832_7280937_7282017
ENSMUSG00000050587.15_0	chr2	+	3492	3	FSM	ENSMUSG00000050587.15	ENSMUST00000059049.8	3492	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCGGACATAGCTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	97298001	97462009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_97298766_97433833_97433886_97459333
ENSMUSG00000050605.18_0	chr7	-	2464	7	FSM	ENSMUSG00000050605.18	ENSMUST00000077780.14	2480	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTATCATGTGGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	23999091	23990470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_23991930_23992769_23992860_23994379_23994507_23995403_23995450_23996997_23997164_23997698_23997801_23998617
ENSMUSG00000050608.12_0	chr4	-	2533	4	FSM	ENSMUSG00000050608.12	ENSMUST00000143971.2	2549	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGCTGGGTCTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	138858413	138829129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_138831324_138832300_138832411_138833166_138833215_138858232
ENSMUSG00000050612.7_0	chr17	-	1091	2	FSM	ENSMUSG00000050612.7	ENST00000306084.6	1102	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACACTGTCAACTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	65945641	65944510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_65944864_65944903
ENSMUSG00000050619.15_0	chr2	-	2638	5	FSM	ENSMUSG00000050619.15	ENSMUST00000110661.9	5072	5	15	2419	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAAGCCAGCCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121000734	120991172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290
ENSMUSG00000050619.15_1	chr2	-	2995	6	ISM	ENSMUSG00000050619.15	ENST00000684362.1	3015	7	10	159923	10	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTAAGCCAGCCCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121001585	120991172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_120992031_120994227_120994684_120996524_120997200_120999679_120999885_121000290_121000748_121001241
ENSMUSG00000050619.15_4	chr2	-	1358	3	FSM	ENSMUSG00000050619.15	ENST00000568898.5	1378	3	12	8	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTCAGTGCTTAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	121000593	120991180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120992031_120999679_120999885_121000290
ENSMUSG00000050621.8_0	chr9	-	310	1	FSM	ENSMUSG00000050621.8	ENSMUST00000053150.8	374	1	27	37	27	-37	mono-exon	FALSE	NA	NA	NA	NA	NA	4072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATATATAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114811780	114811470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114811500_114811800
ENSMUSG00000050623.6_0	chr19	-	735	4	ISM	ENSMUSG00000050623.6	ENSMUST00000237380.2	806	5	210	3	210	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6902517	6899793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161
ENSMUSG00000050623.6_1	chr19	-	786	5	FSM	ENSMUSG00000050623.6	ENSMUST00000237380.2	806	5	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGTCAGTGCGTGGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	6902710	6899793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6900029_6900668_6900736_6900890_6900968_6902161_6902518_6902659
ENSMUSG00000050627.14_0	chr9	-	4370	8	FSM	ENSMUSG00000050627.14	ENSMUST00000146623.8	4391	8	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTATAACTTGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	114763042	114728416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114731571_114732728_114732836_114733842_114734077_114739943_114740057_114743393_114743533_114746048_114746190_114749589_114749768_114762738
ENSMUSG00000050628.7_0	chr11	+	1471	3	FSM	ENSMUSG00000050628.7	ENSMUST00000057676.7	1482	3	10	1	10	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTGTGTTTTTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	116324929	116329902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116325255_116325384_116325448_116328819
ENSMUSG00000050640.17_0	chr5	-	481	6	FSM	ENSMUSG00000050640.17	ENST00000508701.5	493	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGATCCCGAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100243552	100231488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100231611_100233996_100234114_100240625_100240694_100240793_100240827_100240917_100240972_100243465
ENSMUSG00000050640.17_1	chr5	-	394	5	ISM	ENSMUSG00000050640.17	ENST00000508701.5	493	6	2587	6	2587	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGGGATCCCGAGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	100240971	100231488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_100231611_100233996_100234114_100240625_100240694_100240793_100240827_100240917
ENSMUSG00000050641.8_0	chr9	+	657	4	FSM	ENSMUSG00000050641.8	ENST00000432035.2	666	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACATAGCAGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108313706	108323275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108313779_108315622_108315737_108322398_108322456_108322861
ENSMUSG00000050641.8_5	chr9	+	583	3	ISM	ENSMUSG00000050641.8	ENST00000432035.2	666	4	1921	6	1921	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACATAGCAGGCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108315624	108323275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_108315737_108322398_108322456_108322861
ENSMUSG00000050663.9_0	chr10	-	6610	19	FSM	ENSMUSG00000050663.9	ENSMUST00000239411.2	6652	19	37	5	37	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCACACATTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	114638170	114234732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_114237444_114244550_114244633_114248345_114248487_114249053_114249222_114280583_114280692_114282040_114282139_114284144_114284293_114322610_114322667_114322777_114322912_114334673_114334763_114338898_114339087_114340081_114340148_114354035_114354102_114403031_114403170_114424331_114424446_114427956_114428112_114531915_114532043_114623846_114624121_114636423
ENSMUSG00000050668.11_0	chr17	+	4119	10	FSM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATAGTTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79143023	79155728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79143108_79144222_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050668.11_3	chr17	+	4035	9	ISM	ENSMUSG00000050668.11	ENSMUST00000170759.3	4134	10	1205	9	1205	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATAGTTTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	79144222	79155728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_79144350_79145259_79145332_79146415_79146643_79147506_79147549_79148391_79148513_79148647_79148739_79149541_79149659_79151247_79151330_79152572
ENSMUSG00000050675.8_0	chr11	+	1862	2	FSM	ENSMUSG00000050675.8	ENST00000611961.1	1883	2	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGAGTGGAGATCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	70530255	70532439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70531583_70531904
ENSMUSG00000050677.3_0	chr5	+	3556	1	FSM	ENSMUSG00000050677.3	ENSMUST00000060100.3	3585	1	24	5	24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATTTTTTTAAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	36641955	36645511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_36642000_36645500
ENSMUSG00000050697.10_0	chr15	+	1870	9	FSM	ENSMUSG00000050697.10	ENST00000354209.7	1889	9	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAACCTAAAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	5173188	5208406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5173478_5190083_5190226_5194192_5194322_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUSG00000050697.10_9	chr15	+	4618	9	FSM	ENSMUSG00000050697.10	ENSMUST00000228218.2	4618	9	-1	1	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTACACAGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5173371	5211372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5173478_5190083_5190226_5194192_5194287_5198048_5198194_5199409_5199498_5203688_5203914_5205966_5206454_5206559_5206687_5208168
ENSMUSG00000050705.16_0	chr17	-	1277	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148721.8	1293	6	6	10	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATAAGGCAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36208317	36203578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36208082
ENSMUSG00000050705.16_1	chr17	-	1167	6	FSM	ENSMUSG00000050705.16	ENSMUST00000148482.8	1193	6	16	10	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGACATAAGGCAGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	36207996	36203578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36203859_36203931_36204002_36205810_36206012_36206175_36206265_36206562_36206965_36207871
ENSMUSG00000050708.17_0	chr7	-	950	4	FSM	ENSMUSG00000050708.17	ENSMUST00000094434.13	968	4	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	81328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGCAGCTGGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	45109298	45107375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45107708_45107958_45108085_45108507_45108655_45108953
ENSMUSG00000050721.10_0	chr9	-	3255	6	FSM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAACTTCTCTGGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	65487310	65461671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261_65480412_65487219
ENSMUSG00000050721.10_1	chr9	-	3166	5	ISM	ENSMUSG00000050721.10	ENSMUST00000068944.9	3273	6	6909	6	6909	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGAACTTCTCTGGCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	65480413	65461671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_65464362_65465900_65466000_65466701_65466807_65471165_65471286_65480261
ENSMUSG00000050730.18_0	chr9	-	6102	23	FSM	ENSMUSG00000050730.18	ENSMUST00000093893.12	6116	23	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCATTTTCTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	9239098	8994335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ENSMUSG00000050730.18_11	chr9	-	3263	24	FSM	ENSMUSG00000050730.18	ENST00000298815.13	3280	24	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGAATATTAGATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	9238787	8996965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_8997687_8998166_8998247_9003620_9003684_9005734_9005892_9006257_9006642_9007968_9008114_9009277_9009438_9011336_9011443_9015300_9015360_9016144_9016230_9016964_9017040_9018204_9018268_9029423_9029464_9030794_9030874_9033471_9033582_9035509_9035611_9046505_9046636_9048888_9048994_9059049_9059161_9074909_9075012_9115690_9115763_9155303_9155366_9180027_9180124_9238630
ENSMUSG00000050730.18_16	chr9	-	1439	4	FSM	ENSMUSG00000050730.18	ENSMUST00000183182.2	1458	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAACACTGACTGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	9239019	9147363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_9148256_9155303_9155366_9180027_9180124_9238630
ENSMUSG00000050732.10_0	chr6	-	804	3	FSM	ENSMUSG00000050732.10	ENSMUST00000059983.10	820	3	9	7	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTACGAGGCGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	72367677	72362212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72362637_72365244_72365404_72367456
ENSMUSG00000050777.8_0	chr1	-	1303	2	FSM	ENSMUSG00000050777.8	ENSMUST00000056089.8	1311	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTCCTATGACTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120001796	119995106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119996055_120001441
ENSMUSG00000050786.9_0	chr6	+	2337	3	FSM	ENSMUSG00000050786.9	ENSMUST00000055559.8	2351	3	7	7	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCACAATGGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	49296214	49318509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_49296415_49310844_49311232_49316759
ENSMUSG00000050796.5_0	chr4	-	3168	1	FSM	ENSMUSG00000050796.5	ENSMUST00000052185.5	3184	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	557	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGAACGTGTTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	156077097	156073929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156073900_156077100
ENSMUSG00000050808.14_0	chr2	+	591	2	FSM	ENSMUSG00000050808.14	ENST00000527569.1	607	2	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTTCTGCAAGATCAC	NA	NA	NA	NA	NA	NA	NA	NA	110561891	110567923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_110562251_110567691
ENSMUSG00000050812.19_1	chr4	-	7032	49	FSM	ENSMUSG00000050812.19	ENSMUST00000102889.10	7045	49	4	9	4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGATTCATAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	58912745	58798919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912475
ENSMUSG00000050812.19_7	chr4	-	7109	50	FSM	ENSMUSG00000050812.19	ENST00000259335.8	7135	50	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAATAACTTAACATT	NA	NA	NA	NA	NA	NA	NA	NA	58912815	58798933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_58800321_58801732_58801805_58803669_58803759_58805540_58805647_58807750_58807890_58809395_58809589_58809681_58809726_58810615_58810825_58811370_58811563_58811708_58811776_58811851_58811944_58812643_58812711_58813991_58814082_58815258_58815325_58817399_58817551_58819142_58819265_58820127_58820176_58821362_58821469_58822035_58822116_58824165_58824334_58824697_58824816_58826401_58826471_58827036_58827152_58828007_58828063_58828506_58828653_58830333_58830458_58832703_58832806_58833925_58834099_58834496_58834660_58836121_58836257_58840674_58840767_58841382_58841606_58842567_58842649_58844078_58844203_58846998_58847103_58849679_58849803_58849886_58849954_58850903_58850954_58853115_58853195_58853650_58853737_58861524_58861645_58864346_58864429_58869414_58869555_58872588_58872761_58875423_58875574_58877044_58877164_58879017_58879135_58885367_58885499_58912365_58912606_58912694
ENSMUSG00000050821.15_0	chr16	+	2261	3	FSM	ENSMUSG00000050821.15	ENST00000310585.4	2281	3	11	9	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCTATATACATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	20517670	20521787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20518201_20518378_20518496_20520173
ENSMUSG00000050822.12_0	chr5	+	2783	11	FSM	ENSMUSG00000050822.12	ENSMUST00000058418.8	2789	11	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCCCACCGCTGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	142687855	142708239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_142688047_142691110_142691291_142697717_142697850_142698641_142698756_142699765_142699895_142700800_142700876_142703346_142703592_142704211_142704354_142704465_142704654_142705711_142705953_142707093
ENSMUSG00000050846.10_0	chr15	+	2458	2	FSM	ENSMUSG00000050846.10	ENSMUST00000037260.8	2486	2	14	14	14	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAATCCCAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	75812814	75821235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75813009_75818971
ENSMUSG00000050854.10_0	chr4	-	1104	3	FSM	ENSMUSG00000050854.10	ENST00000439858.6	1109	3	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTTGTGGCAGACATTC	NA	NA	NA	NA	NA	NA	NA	NA	118401240	118398735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_118399569_118399797_118399958_118401129
ENSMUSG00000050855.17_0	chr7	-	2751	5	FSM	ENSMUSG00000050855.17	ENSMUST00000085792.5	2764	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGGTGTGACTTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	29553061	29543361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29545674_29545893_29545990_29546258_29546386_29550366_29550443_29552921
ENSMUSG00000050856.17_0	chr5	-	360	4	FSM	ENSMUSG00000050856.17	ENSMUST00000049628.16	371	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCTCTCTTTACTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108582303	108581109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108581204_108581596_108581696_108581891_108581947_108582191
ENSMUSG00000050860.7_0	chr11	+	2094	3	FSM	ENSMUSG00000050860.7	ENST00000413580.5	2107	3	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGGGACAAAGGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	95715364	95722958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95715649_95719491_95719602_95721258
ENSMUSG00000050890.16_0	chr4	-	4495	3	FSM	ENSMUSG00000050890.16	ENSMUST00000105876.9	4509	3	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTCAACAAAAAACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	134014564	134002327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134006428_134011556_134011859_134014471
ENSMUSG00000050890.16_1	chr4	-	4389	2	ISM	ENSMUSG00000050890.16	ENSMUST00000105877.9	4674	4	2696	24	2696	-23	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTGAATTTCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	134011854	134002336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_134006428_134011556
ENSMUSG00000050891.11_17	chr15	-	652	8	FSM	ENSMUSG00000050891.11	ENST00000517678.5	661	8	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTTGTTTTGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	58800597	58776584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58800532
ENSMUSG00000050891.11_18	chr15	-	583	7	ISM	ENSMUSG00000050891.11	ENST00000517678.5	661	8	7336	8	7336	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAAGTTGTTTTGCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	58793262	58776584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122
ENSMUSG00000050891.11_3	chr15	-	914	12	FSM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	58805576	58772823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532_58800599_58805527
ENSMUSG00000050891.11_4	chr15	-	752	9	FSM	ENSMUSG00000050891.11	ENST00000630259.1	752	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	58800599	58772823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58800532
ENSMUSG00000050891.11_5	chr15	-	679	8	ISM	ENSMUSG00000050891.11	ENST00000630259.1	752	9	7339	0	7338	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	58793260	58772823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122
ENSMUSG00000050891.11_7	chr15	-	856	11	ISM	ENSMUSG00000050891.11	ENSMUST00000228538.3	915	12	4987	1	9	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTTTCCTTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	58800589	58772823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_58772920_58776582_58776710_58777589_58777661_58781421_58781499_58788000_58788042_58788125_58788212_58792988_58793032_58793122_58793267_58795753_58795818_58798284_58798335_58800532
ENSMUSG00000050908.13_0	chr16	-	3289	7	FSM	ENSMUSG00000050908.13	ENSMUST00000051118.7	3315	7	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTGAAAACTTGTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	10265210	10238430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_10240750_10242062_10242123_10243623_10243753_10244864_10244994_10245246_10245337_10246522_10246668_10264793
ENSMUSG00000050910.6_0	chr11	+	3675	5	FSM	ENSMUSG00000050910.6	ENSMUST00000053288.6	3700	5	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGAAGTCCAAGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	115272757	115286949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115273228_115281336_115281450_115281688_115281838_115283484_115283650_115284171
ENSMUSG00000050912.16_0	chr9	+	2891	5	FSM	ENSMUSG00000050912.16	ENSMUST00000052865.16	2907	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3794	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAAAGTGTTTAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	7764050	7794327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7764314_7768290_7768342_7790842_7791110_7791311_7791466_7792171
ENSMUSG00000050914.17_0	chr8	-	908	5	FSM	ENSMUSG00000050914.17	ENSMUST00000053558.10	927	5	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAATTAAAATTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46452897	46449950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_46450163_46450650_46450858_46451433_46451526_46452287_46452441_46452653
ENSMUSG00000050917.6_0	chr7	+	2119	3	FSM	ENSMUSG00000050917.6	ENST00000168712.3	2141	3	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGGAAGAAGCCACACC	NA	NA	NA	NA	NA	NA	NA	NA	144415230	144418182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_144415570_144415968_144416068_144416501
ENSMUSG00000050931.8_0	chr3	-	5780	6	FSM	ENSMUSG00000050931.8	ENSMUST00000090246.5	5801	6	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATCAAATATATGAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	131138569	131112641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_131116960_131118587_131118755_131123971_131124126_131129813_131129932_131135417_131136110_131138238
ENSMUSG00000050945.9_0	chr18	-	3196	5	FSM	ENSMUSG00000050945.9	ENSMUST00000063989.7	3211	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACACAATTTTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5334431	5210035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_5211199_5213118_5214920_5245385_5245454_5288860_5288939_5334345
ENSMUSG00000050945.9_2	chr18	-	2814	4	FSM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAGAGAAAATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	5288913	5210372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_5211199_5213118_5214920_5245385_5245504_5288844
ENSMUSG00000050945.9_4	chr18	-	2745	3	ISM	ENSMUSG00000050945.9	ENST00000413025.5	2826	4	43410	12	43410	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAGAGAAAATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	5245503	5210372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_5211199_5213118_5214920_5245385
ENSMUSG00000050945.9_9	chr18	-	1740	5	FSM	ENSMUSG00000050945.9	ENST00000375311.1	1742	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGGGAAAGTTCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	5288911	5210699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_5211199_5213118_5214028_5214772_5214920_5245385_5245504_5288844
ENSMUSG00000050947.10_0	chr3	+	5004	2	FSM	ENSMUSG00000050947.10	ENSMUST00000050909.7	5030	2	26	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTTGTGGTTGGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108093676	108099092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108093995_108094406
ENSMUSG00000050953.11_0	chr10	+	2931	2	FSM	ENSMUSG00000050953.11	ENST00000649003.1	2939	2	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAGTATAATAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	56253376	56266498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_56253439_56263629
ENSMUSG00000050953.11_1	chr10	+	3051	2	FSM	ENSMUSG00000050953.11	ENSMUST00000068581.9	3071	2	12	8	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAATAAAGATAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	56253437	56266503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_56253615_56263629
ENSMUSG00000050953.11_3	chr10	+	3164	2	FSM	ENSMUSG00000050953.11	ENSMUST00000220069.2	3182	2	10	8	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAATAAAGATAACCTG	NA	NA	NA	NA	NA	NA	NA	NA	56255193	56266503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_56255484_56263629
ENSMUSG00000050953.11_5	chr10	+	2862	1	ISM	ENSMUSG00000050953.11	ENST00000649003.1	2939	2	10263	5	8453	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTAGTATAATAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	56263636	56266498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_56263600_56266500
ENSMUSG00000050957.5_0	chr19	-	674	2	FSM	ENSMUSG00000050957.5	ENSMUST00000052380.5	708	2	23	11	23	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAATCTAATTTACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	29302733	29298754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29299140_29302444
ENSMUSG00000050965.15_0	chr11	-	8393	17	FSM	ENSMUSG00000050965.15	ENSMUST00000059595.11	8409	17	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCGGCTGTCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	108234739	107824213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_107830507_107842291_107842433_107844467_107844576_107852398_107852480_107869059_107869199_107870028_107870092_107872436_107872529_107874710_107874885_107877073_107877212_107903452_107903550_107903770_107903906_107905050_107905208_107944800_107944930_107948587_107948700_108082955_108083039_108231471_108231504_108234320
ENSMUSG00000050973.12_0	chr7	+	4175	2	FSM	ENSMUSG00000050973.12	ENSMUST00000062915.9	4189	2	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAACAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	79882626	79891809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_79882954_79887961
ENSMUSG00000050989.11_0	chr4	-	3422	12	FSM	ENSMUSG00000050989.11	ENSMUST00000060435.8	3445	12	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTAGCTTGGTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	134279460	134265208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272625_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000050989.11_3	chr4	-	1592	12	FSM	ENSMUSG00000050989.11	ENST00000354177.9	1605	12	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCTAGAGGACCTGGACC	NA	NA	NA	NA	NA	NA	NA	NA	134279419	134266928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_134267101_134267944_134268047_134268133_134268247_134269647_134269754_134270023_134270213_134270360_134270443_134271895_134272034_134272499_134272556_134272791_134273002_134275261_134275396_134278727_134278846_134279247
ENSMUSG00000051000.18_0	chr3	-	4259	11	FSM	ENSMUSG00000051000.18	ENSMUST00000094148.6	4280	11	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAACTTGAGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	85648681	85567377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_85568526_85572659_85572799_85573094_85573274_85579529_85580787_85583377_85583569_85590886_85590967_85595737_85595906_85627722_85627810_85629698_85629858_85637565_85638193_85648457
ENSMUSG00000051000.18_1	chr3	-	4432	12	FSM	ENSMUSG00000051000.18	ENSMUST00000118408.8	4445	12	5	8	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAACTTGAGAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	85653568	85567377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_85568526_85572659_85572799_85573094_85573274_85579529_85580787_85583377_85583569_85590886_85590967_85595737_85595906_85627722_85627810_85629698_85629858_85637565_85638193_85648457_85648682_85653395
ENSMUSG00000051007.16_0	chr7	-	1879	8	FSM	ENSMUSG00000051007.16	ENSMUST00000106008.3	1898	8	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGCATATGTACACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	140994035	140987711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140988878_140989001_140989114_140989243_140989338_140989758_140989854_140990690_140990799_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_3	chr7	-	545	6	FSM	ENSMUSG00000051007.16	ENST00000524550.5	553	6	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGTGAGGCTCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	140993980	140989006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140989114_140989243_140989338_140989758_140989854_140990898_140991005_140991710_140991788_140993914
ENSMUSG00000051007.16_4	chr7	-	481	5	ISM	ENSMUSG00000051007.16	ENST00000524550.5	553	6	2193	6	2193	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGGTGAGGCTCCCGGGC	NA	NA	NA	NA	NA	NA	NA	NA	140991789	140989006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_140989114_140989243_140989338_140989758_140989854_140990898_140991005_140991710
ENSMUSG00000051022.8_0	chr5	-	1653	3	FSM	ENSMUSG00000051022.8	ENSMUST00000117944.2	1686	3	27	6	27	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGATGTTGCTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	39912791	39771283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_39772748_39907172_39907223_39912652
ENSMUSG00000051022.8_1	chr5	-	1674	2	FSM	ENSMUSG00000051022.8	ENSMUST00000053116.7	1684	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGGATGTTGCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	39801971	39771285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_39772748_39801759
ENSMUSG00000051029.9_0	chr13	+	1683	7	FSM	ENSMUSG00000051029.9	ENSMUST00000016951.8	1696	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATACCACTTGCTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	33268114	33278357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_33268201_33269260_33269437_33271398_33271537_33273612_33273731_33275300_33275444_33275634_33275803_33277503
ENSMUSG00000051037.16_0	chr13	+	2704	4	FSM	ENSMUSG00000051037.16	ENSMUST00000120861.8	2712	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCACTTGGGTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	67342569	67357354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67342659_67346596_67346724_67347212_67347309_67354962
ENSMUSG00000051043.17_0	chr11	+	1242	4	FSM	ENSMUSG00000051043.17	ENST00000342648.9	1257	4	11	4	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTCTTGCTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	114741998	114759918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114742404_114755227_114755373_114757450_114757546_114759321
ENSMUSG00000051043.17_3	chr11	+	2179	4	FSM	ENSMUSG00000051043.17	ENSMUST00000021071.14	2200	4	17	4	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTAGCTCTTGCTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	114742692	114759918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114743100_114754292_114755373_114757450_114757546_114759321
ENSMUSG00000051048.18_0	chr7	+	2340	13	FSM	ENSMUSG00000051048.18	ENSMUST00000057023.12	2361	13	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	441	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACACATCTTCTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	99934740	99968899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_99934934_99941782_99941926_99942953_99943178_99947104_99947255_99949843_99949896_99954706_99954871_99955073_99955251_99959993_99960059_99962412_99962573_99963814_99963878_99966248_99966318_99967188_99967286_99968116
ENSMUSG00000051065.10_0	chr16	-	3032	2	FSM	ENSMUSG00000051065.10	ENSMUST00000100023.3	3055	2	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGTTGTCATTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	28748404	28644929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_28647762_28748204
ENSMUSG00000051074.5_0	chr9	-	613	1	FSM	ENSMUSG00000051074.5	ENSMUST00000058992.3	652	1	31	8	12	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGCCAGGAAAAGTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	98445633	98445020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_98445000_98445600
ENSMUSG00000051098.7_0	chr13	+	3944	2	FSM	ENSMUSG00000051098.7	ENSMUST00000057598.7	3957	2	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAAGTGGTGCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	81859465	81901387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_81860102_81898079
ENSMUSG00000051113.10_0	chr7	+	468	4	FSM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGGACACTGCGCCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44145670	44149773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44145707_44146356_44146458_44146926_44147058_44149573
ENSMUSG00000051113.10_6	chr7	+	421	3	ISM	ENSMUSG00000051113.10	ENST00000595790.5	473	4	696	6	285	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGAGGACACTGCGCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	44146366	44149772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_44146458_44146926_44147058_44149573
ENSMUSG00000051118.10_0	chr9	+	9634	3	FSM	ENSMUSG00000051118.10	ENSMUST00000057596.10	9649	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGGATGGGGGGTATAGG	NA	NA	NA	NA	NA	NA	NA	NA	19828169	19840414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_19828732_19829972_19830121_19831490
ENSMUSG00000051124.7_0	chr6	+	1375	2	FSM	ENSMUSG00000051124.7	ENSMUST00000054050.5	1384	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTGATCAGTATGATT	NA	NA	NA	NA	NA	NA	NA	NA	48653062	48655624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48653189_48654375
ENSMUSG00000051146.4_0	chr16	-	1267	2	FSM	ENSMUSG00000051146.4	ENSMUST00000052939.4	1291	2	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTGTGTGTGTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	20440019	20437970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20438994_20439775
ENSMUSG00000051147.11_0	chr8	+	1388	2	FSM	ENSMUSG00000051147.11	ENSMUST00000093470.7	1396	2	0	8	0	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCATTTTCAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	67947509	67955228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_67947555_67953885
ENSMUSG00000051147.11_1	chr8	+	1344	1	NIC	ENSMUSG00000051147.11	novel	1396	2	NA	NA	6285	6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCATTTTCAAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	67953884	67955228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_67953900_67955200
ENSMUSG00000051149.16_0	chr2	-	4903	5	FSM	ENSMUSG00000051149.16	ENSMUST00000057793.11	4917	5	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	168048836	168022913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168046519_168046695_168048493
ENSMUSG00000051149.16_1	chr2	-	4923	4	FSM	ENSMUSG00000051149.16	ENSMUST00000088001.6	4932	4	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	168049031	168022913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168048493
ENSMUSG00000051154.12_0	chr2	+	922	8	FSM	ENSMUSG00000051154.12	ENSMUST00000061158.5	935	8	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTGTTTGGAGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18677245	18681041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_18677415_18678705_18678818_18678935_18679000_18679091_18679127_18679466_18679528_18679619_18679677_18679760_18679821_18680677
ENSMUSG00000051159.17_0	chrX	-	837	3	FSM	ENSMUSG00000051159.17	ENST00000431381.5	852	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATAACTGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101294218	101290994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101291615_101292168_101292294_101294126
ENSMUSG00000051159.17_1	chrX	-	745	2	ISM	ENSMUSG00000051159.17	ENST00000431381.5	852	3	1933	7	1933	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGATAACTGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	101292293	101290994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_101291615_101292168
ENSMUSG00000051166.11_0	chr12	-	9465	41	FSM	ENSMUSG00000051166.11	ENSMUST00000065716.8	9482	41	17	0	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCATAGTC	NA	NA	NA	NA	NA	NA	NA	NA	98867414	98753063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98756646_98756871_98756973_98757535_98757690_98758282_98758387_98758774_98758938_98760372_98760546_98760689_98760879_98762765_98762881_98765049_98765208_98767161_98767371_98768542_98768734_98776773_98776877_98782193_98782324_98784078_98784158_98790892_98791020_98791637_98791840_98793592_98793770_98794965_98795055_98797118_98797251_98797330_98797484_98803501_98803644_98807809_98807938_98808930_98809043_98810212_98810416_98817640_98817742_98818866_98818961_98822182_98822289_98824977_98825165_98826217_98826337_98826718_98826826_98827403_98827572_98829355_98829569_98831512_98831770_98837025_98837164_98839262_98839348_98840765_98840902_98842385_98842572_98847069_98847139_98848234_98848334_98853240_98853401_98867090
ENSMUSG00000051169.15_0	chr6	-	1248	9	FSM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	8	13	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGAAAGCAGATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	113396293	113392292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991_113395037_113395770_113395911_113396178
ENSMUSG00000051169.15_10	chr6	-	588	5	NIC	ENSMUSG00000051169.15	novel	1269	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACAGTAGACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	113394898	113392503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394807
ENSMUSG00000051169.15_11	chr6	-	644	6	NIC	ENSMUSG00000051169.15	novel	644	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAACAGTAGACTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	113395038	113392503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_-_113392684_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991
ENSMUSG00000051169.15_2	chr6	-	919	6	ISM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	1401	35	3	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGGTCTGGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	113394900	113392314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807
ENSMUSG00000051169.15_5	chr6	-	973	7	ISM	ENSMUSG00000051169.15	ENSMUST00000113092.9	1269	9	1263	35	0	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGGTCTGGTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	113395038	113392314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113392684_113393267_113393408_113393749_113393874_113394101_113394187_113394264_113394373_113394807_113394908_113394991
ENSMUSG00000051177.17_1	chr2	+	3262	28	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	463442	203	3	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTCCTGTTTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135091891	135241392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135091971_135093652_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168
ENSMUSG00000051177.17_18	chr2	+	3183	27	ISM	ENSMUSG00000051177.17	ENSMUST00000070724.12	3853	32	465203	203	1764	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCCTCCTGTTTCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	135093652	135241392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168
ENSMUSG00000051177.17_19	chr2	+	4535	28	ISM	ENSMUSG00000051177.17	ENSMUST00000131552.5	7202	33	465667	1736	1765	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGTCAGGATATGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135093653	135315431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051177.17_4	chr2	+	4617	29	ISM	ENSMUSG00000051177.17	ENSMUST00000131552.5	7202	33	463903	1736	1	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGTCAGGATATGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135091889	135315431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135091971_135093652_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135241168_135241287_135313972
ENSMUSG00000051177.17_5	chr2	+	6239	28	ISM	ENSMUSG00000051177.17	ENSMUST00000110116.8	7003	32	463811	7	1	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACAGTCCAGCTGGACCT	NA	NA	NA	NA	NA	NA	NA	NA	135091889	135317171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135091971_135093652_135093707_135094694_135094771_135102418_135102520_135104027_135104195_135136768_135136916_135152840_135152999_135159705_135159789_135164529_135164615_135167542_135167721_135172219_135172288_135175267_135175365_135177347_135177433_135179356_135179482_135182579_135182735_135186077_135186243_135186942_135187043_135188216_135188322_135189286_135189397_135201573_135201707_135204303_135204358_135206687_135206908_135212340_135212522_135228013_135228091_135228192_135228283_135229055_135229114_135229717_135229805_135313972
ENSMUSG00000051184.8_0	chr7	+	1247	3	FSM	ENSMUSG00000051184.8	ENSMUST00000207901.2	1263	3	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTCCACTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5017423	5021481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5017526_5019944_5020044_5020435
ENSMUSG00000051184.8_2	chr7	+	1048	1	NIC	ENSMUSG00000051184.8	novel	1263	3	NA	NA	1628	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTCCACTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5020433	5021481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_5020400_5021500
ENSMUSG00000051185.10_0	chr1	+	2091	3	FSM	ENSMUSG00000051185.10	ENSMUST00000059975.8	2112	3	14	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATACTAAAACAGCGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	95241361	95263002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_95241976_95252833_95252969_95261660
ENSMUSG00000051212.9_0	chr14	-	2714	2	FSM	ENSMUSG00000051212.9	ENSMUST00000049872.9	2724	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACAGAGTCTCATTATAT	NA	NA	NA	NA	NA	NA	NA	NA	122202597	122189962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_122192544_122202464
ENSMUSG00000051220.3_0	chrX	-	5289	2	FSM	ENSMUSG00000051220.3	ENSMUST00000056904.3	5302	2	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCCGGTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101200685	101185322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101190440_101200513
ENSMUSG00000051220.3_1	chrX	-	3956	3	FSM	ENSMUSG00000051220.3	ENST00000373657.2	3962	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTTCTTCCCTTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	101200649	101186727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101190440_101198626_101198735_101200513
ENSMUSG00000051223.15_0	chr1	+	3855	12	FSM	ENSMUSG00000051223.15	ENSMUST00000050552.15	3876	12	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATACTACGTACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58432068	58446503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58432376_58433360_58433435_58436834_58437012_58438162_58438258_58439237_58439304_58439865_58440002_58440272_58440383_58440499_58440671_58442045_58442193_58442773_58442913_58443390_58443514_58444193
ENSMUSG00000051224.14_0	chrX	-	4017	5	FSM	ENSMUSG00000051224.14	ENSMUST00000112188.8	4050	5	22	11	22	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAAAAATCTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	165293452	165282818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_165286402_165288701_165288833_165290704_165290743_165291901_165292003_165293288
ENSMUSG00000051225.10_0	chr15	+	948	3	FSM	ENSMUSG00000051225.10	ENST00000522648.5	960	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAATGCCCACAACCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	57849370	57873201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57849938_57858609_57858735_57872945
ENSMUSG00000051232.14_0	chr11	-	1328	6	FSM	ENSMUSG00000051232.14	ENSMUST00000052566.8	1347	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATTTTTATCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	78402985	78397886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78398632_78399144_78399258_78399478_78399522_78400550_78400641_78401173_78401248_78402722
ENSMUSG00000051234.7_0	chr9	-	1213	3	FSM	ENSMUSG00000051234.7	ENSMUST00000057500.6	1232	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTAATATGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	96360719	96352999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_96353906_96356010_96356059_96360460
ENSMUSG00000051235.11_0	chr12	-	5235	14	FSM	ENSMUSG00000051235.11	ENSMUST00000166117.4	5268	14	24	9	24	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAGAATGATTTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	11315743	11288929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_11292578_11293190_11293335_11296289_11296352_11298215_11298347_11299130_11299212_11300052_11300090_11300714_11300866_11302004_11302094_11304351_11304426_11305157_11305269_11306838_11307016_11310882_11311070_11312407_11312595_11315587
ENSMUSG00000051236.14_0	chr10	-	3828	7	FSM	ENSMUSG00000051236.14	ENSMUST00000092143.12	3843	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGTCTCTCTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	120735000	120617009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_120620144_120627306_120627405_120661012_120661042_120685880_120685959_120687888_120687998_120706939_120707057_120734737
ENSMUSG00000051238.7_0	chr9	+	1827	2	FSM	ENSMUSG00000051238.7	ENSMUST00000053583.7	1838	2	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATTGGACTCTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	21867057	21869556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21867301_21867972
ENSMUSG00000051242.2_0	chr18	+	3021	1	FSM	ENSMUSG00000051242.2	ENSMUST00000057228.2	3055	1	26	8	26	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCATTGCTTAGCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	37533933	37536954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37533900_37537000
ENSMUSG00000051255.7_0	chr19	+	864	1	FSM	ENSMUSG00000051255.7	ENSMUST00000056396.7	633	1	-2	-229	-2	229	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATAAAAAAGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	23653209	23654073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_23653200_23654100
ENSMUSG00000051256.11_0	chr6	+	1190	2	FSM	ENSMUSG00000051256.11	ENSMUST00000101070.5	1201	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGTGTTGGAGATTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	113419540	113425190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113419759_113424218
ENSMUSG00000051256.11_1	chr6	+	1123	2	FSM	ENSMUSG00000051256.11	ENSMUST00000204254.2	1147	2	15	9	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATAAATAAAGTTAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	113419585	113425161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113419766_113424218
ENSMUSG00000051256.11_2	chr6	+	1128	2	FSM	ENSMUSG00000051256.11	ENST00000489724.2	1152	2	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACCTCAATAAATAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	113419676	113425155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113419759_113424109
ENSMUSG00000051278.13_0	chr3	+	7046	26	FSM	ENSMUSG00000051278.13	ENSMUST00000043108.9	7046	26	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCTTATGTGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127347137	127411670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_127347305_127348944_127349035_127349841_127349923_127353219_127353280_127354544_127354731_127355123_127356868_127361276_127361351_127366788_127366975_127375094_127375219_127377232_127377820_127378304_127378444_127379667_127379853_127381589_127381787_127383617_127383758_127389527_127389672_127392349_127392465_127394628_127394889_127396046_127396207_127400017_127400096_127402133_127402282_127405432_127405561_127406991_127407116_127408775_127408953_127409085_127409221_127409907_127410170_127410315
ENSMUSG00000051285.18_0	chr1	+	5215	6	FSM	ENSMUSG00000051285.18	ENSMUST00000061280.17	5232	6	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTTTTGAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	7159158	7243850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_7159441_7190417_7190840_7217860_7217964_7231115_7231288_7233471_7233596_7239738
ENSMUSG00000051295.9_0	chr1	-	3367	2	FSM	ENSMUSG00000051295.9	ENSMUST00000143787.3	3408	2	33	8	33	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCAACTTCCAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	185173983	185161559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_185164806_185173862
ENSMUSG00000051316.9_0	chr18	-	3281	2	FSM	ENSMUSG00000051316.9	ENSMUST00000066272.6	3302	2	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAACCTGTGAATCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	37777239	37773546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_37776586_37776997
ENSMUSG00000051319.7_0	chr2	-	783	2	FSM	ENSMUSG00000051319.7	ENSMUST00000135091.2	800	2	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGTGACCAAAGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	127634394	127633310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_127633753_127634053
ENSMUSG00000051323.17_0	chrX	-	10286	6	FSM	ENSMUSG00000051323.17	ENSMUST00000149154.8	10289	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTGTCTTGGAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132589736	132483611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_132489327_132526017_132526191_132533643_132533703_132581829_132582158_132582840_132582982_132585866
ENSMUSG00000051323.17_1	chrX	-	8391	5	FSM	ENSMUSG00000051323.17	ENSMUST00000167944.8	8407	5	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAATGAAGTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	132588007	132483633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_132489327_132526017_132526188_132533643_132533703_132581829_132582158_132585866
ENSMUSG00000051329.14_0	chr2	+	5666	37	FSM	ENSMUSG00000051329.14	ENSMUST00000057481.7	5684	37	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTCTGTATATTAAG	NA	NA	NA	NA	NA	NA	NA	NA	90507570	90566666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_90507815_90509357_90509853_90510115_90510228_90514265_90514477_90515316_90515540_90517637_90517717_90519449_90519565_90520410_90520570_90523396_90523475_90524175_90524274_90526983_90527069_90528203_90528273_90530459_90530544_90530756_90530928_90532356_90532457_90532724_90532891_90533402_90533531_90534154_90534316_90537266_90537401_90538476_90538548_90539166_90539327_90540376_90540447_90542288_90542388_90544117_90544238_90547937_90548034_90548157_90548253_90548342_90548440_90548531_90548638_90551533_90551695_90552373_90552435_90553680_90553792_90553955_90554080_90555945_90556048_90560022_90560165_90563124_90563251_90563449_90563555_90565758
ENSMUSG00000051335.7_0	chr13	-	6908	2	FSM	ENSMUSG00000051335.7	ENSMUST00000055341.7	6928	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGAGGTGATTCCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	43457635	43348727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_43354721_43456720
ENSMUSG00000051339.11_0	chr5	-	5853	8	FSM	ENSMUSG00000051339.11	ENSMUST00000050125.9	5876	8	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTAACTCTGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	113311202	113234196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113310923
ENSMUSG00000051339.11_1	chr5	-	10204	12	ISM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	27335	2	27335	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGAGGCTGCATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	113341767	113234190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626
ENSMUSG00000051339.11_2	chr5	-	10230	13	FSM	ENSMUSG00000051339.11	ENSMUST00000211733.2	10238	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTAACTCTGAGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	113369102	113234196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113238891_113240280_113240364_113240967_113241111_113241831_113241951_113243455_113243631_113245463_113245705_113249324_113249444_113323070_113323206_113329919_113332584_113336151_113336240_113338469_113340066_113341626_113341774_113369076
ENSMUSG00000051341.7_0	chr17	+	3157	5	FSM	ENSMUSG00000051341.7	ENSMUST00000233281.2	3164	5	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAATCATA	NA	NA	NA	NA	NA	NA	NA	NA	21755807	21782863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21756096_21758834_21758933_21775246_21775338_21777396_21777524_21780310
ENSMUSG00000051343.12_0	chr6	-	4015	5	FSM	ENSMUSG00000051343.12	ENSMUST00000060837.10	4035	5	15	5	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCAGCTTGTGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85351531	85311948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85314209_85314462_85314653_85324761_85325438_85325536_85325974_85351079
ENSMUSG00000051343.12_2	chr6	-	6096	6	FSM	ENSMUSG00000051343.12	ENSMUST00000204087.2	6119	6	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCAGCCAGCTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	85351598	85311953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85314209_85314462_85314653_85317324_85319344_85324761_85325438_85325536_85325974_85351079
ENSMUSG00000051344.14_0	chr1	-	2112	6	FSM	ENSMUSG00000051344.14	ENST00000457206.1	2127	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTATGTGCTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	64977591	64900350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64900410_64921531_64921576_64922287_64922482_64931910_64932057_64960708_64961642_64976855
ENSMUSG00000051344.14_1	chr1	-	2117	6	NNC	ENSMUSG00000051344.14	novel	2127	6	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTATGTGCTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	64977597	64900350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_64900410_64921532_64921576_64922287_64922482_64931910_64932057_64960708_64961642_64976855
ENSMUSG00000051346.10_0	chr10	-	1565	2	FSM	ENSMUSG00000051346.10	ENSMUST00000061995.10	1583	2	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGAACACAAAATACTCT	NA	NA	NA	NA	NA	NA	NA	NA	128047672	128045790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128047261_128047577
ENSMUSG00000051346.10_1	chr10	-	1477	1	NIC	ENSMUSG00000051346.10	novel	1583	2	NA	NA	414	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAAATACTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	128047262	128045785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_128045800_128047300
ENSMUSG00000051351.15_0	chr4	+	4618	3	FSM	ENSMUSG00000051351.15	ENSMUST00000069195.5	4639	3	14	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACATTTATGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	136013391	136021246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136013793_136014382_136014627_136017273
ENSMUSG00000051351.15_1	chr4	+	2912	3	FSM	ENSMUSG00000051351.15	ENST00000374608.3	2924	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTTTCTTTTGTTACG	NA	NA	NA	NA	NA	NA	NA	NA	136013389	136019655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136013793_136014499_136014627_136017273
ENSMUSG00000051355.19_0	chr11	-	4495	3	FSM	ENSMUSG00000051355.19	ENSMUST00000159081.8	4508	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGTTCCAGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	22932369	22846135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_22850058_22906410_22906693_22932078
ENSMUSG00000051359.16_1	chr15	-	1602	3	ISM	ENSMUSG00000051359.16	ENST00000395923.5	1618	4	9	1543	9	807	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTGGAGGACACGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	37397687	37368060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_37369170_37372359_37372466_37397300
ENSMUSG00000051359.16_2	chr15	-	1740	4	FSM	ENSMUSG00000051359.16	ENSMUST00000119730.8	3295	4	5	1550	5	807	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTGGAGGACACGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	37459588	37368060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37369170_37372359_37372466_37397300_37397698_37459460
ENSMUSG00000051367.9_0	chr12	-	3300	2	FSM	ENSMUSG00000051367.9	ENSMUST00000050029.8	3316	2	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCCGTATTGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	73093940	73088603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_73090604_73092640
ENSMUSG00000051373.6_0	chr2	+	1917	2	FSM	ENSMUSG00000051373.6	ENSMUST00000057423.6	1947	2	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAAGCATCCTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	31985557	32000820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31986275_31999620
ENSMUSG00000051375.16_0	chr18	-	3886	3	FSM	ENSMUSG00000051375.16	ENSMUST00000057185.13	3902	3	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGGTTTCTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38342800	38329747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38332582_38335796_38336660_38342611
ENSMUSG00000051375.16_1	chr18	-	3870	3	FSM	ENSMUSG00000051375.16	ENSMUST00000159405.3	3880	3	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTGGTTTCTTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	38345014	38329747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38332582_38335796_38336660_38344841
ENSMUSG00000051378.11_0	chr11	-	3315	16	FSM	ENSMUSG00000051378.11	ENSMUST00000021311.10	3326	16	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTCTGGAAAGTTAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	102815940	102796355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102797103_102797321_102797408_102797821_102797903_102798938_102799465_102799712_102799919_102803179_102803296_102803745_102803915_102804275_102804377_102804509_102804585_102805075_102805253_102805364_102805563_102805640_102805752_102805975_102806081_102806368_102806527_102807014_102807342_102815808
ENSMUSG00000051390.11_0	chr17	+	2593	2	FSM	ENSMUSG00000051390.11	ENSMUST00000053429.11	2612	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTTGGCTTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	34135157	34138293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34135248_34135790
ENSMUSG00000051390.11_1	chr17	+	2505	1	NIC	ENSMUSG00000051390.11	novel	2612	2	NA	NA	644	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCACTTGGCTTCCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	34135788	34138293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_34135800_34138300
ENSMUSG00000051391.10_0	chr5	-	1599	3	FSM	ENSMUSG00000051391.10	ENSMUST00000198270.2	1610	3	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGATGTCGGCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	135963405	135937270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135937976_135939840_135940506_135963176
ENSMUSG00000051391.10_1	chr5	-	3498	2	FSM	ENSMUSG00000051391.10	ENSMUST00000055808.6	3520	2	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTGATGTCGGCGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	135963439	135937270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135940506_135963176
ENSMUSG00000051396.16_0	chr2	-	4302	5	FSM	ENSMUSG00000051396.16	ENSMUST00000124331.8	4314	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTGGGTTTGTCTACTT	NA	NA	NA	NA	NA	NA	NA	NA	3513783	3505564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_3508787_3509329_3510133_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000051397.6_0	chr6	-	1712	1	FSM	ENSMUSG00000051397.6	ENSMUST00000058178.6	1735	1	14	9	14	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATATCATTTTATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	67512766	67511054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_67511100_67512800
ENSMUSG00000051403.10_0	chr7	-	3803	13	FSM	ENSMUSG00000051403.10	ENSMUST00000058444.10	3816	13	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGTGCCTCTGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	19296989	19264725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19265352_19265431_19265519_19265708_19266451_19266571_19266739_19266842_19266985_19267888_19268002_19268295_19268452_19268531_19268683_19268913_19269034_19269415_19269517_19269633_19269680_19271294_19271393_19295735
ENSMUSG00000051413.18_0	chr2	-	5475	3	FSM	ENSMUSG00000051413.18	ENSMUST00000056924.14	5485	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGAACTTGTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	153083336	153069678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_153074640_153077719_153078093_153083195
ENSMUSG00000051427.15_0	chr11	-	5003	12	FSM	ENSMUSG00000051427.15	ENSMUST00000093381.11	5015	12	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAACATTTGTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4110286	4091129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4093936_4094025_4094115_4094509_4094650_4096233_4096403_4096541_4096719_4097168_4097360_4097699_4097778_4098438_4099085_4099930_4100103_4101671_4101931_4102908_4103057_4110158
ENSMUSG00000051439.8_0	chr18	-	1620	2	FSM	ENSMUSG00000051439.8	ENSMUST00000061829.8	1641	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	339	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAACAATGTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	36859837	36858126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36859451_36859541
ENSMUSG00000051444.10_0	chr3	+	2422	2	FSM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTATCAATAACTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	37366702	37375588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37366735_37373198
ENSMUSG00000051444.10_1	chr3	+	2296	2	FSM	ENSMUSG00000051444.10	ENST00000542236.5	2311	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACTATAGGATATACA	NA	NA	NA	NA	NA	NA	NA	NA	37373211	37375657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37375339_37375488
ENSMUSG00000051444.10_4	chr3	+	2381	1	ISM	ENSMUSG00000051444.10	ENSMUST00000057975.8	2433	2	6511	5	17	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAATAACTGCCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	37373213	37375594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_37373200_37375600
ENSMUSG00000051457.8_0	chr7	-	3708	2	FSM	ENSMUSG00000051457.8	ENSMUST00000049931.6	3743	2	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTATGAAAAACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	126736967	126732880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126736540_126736918
ENSMUSG00000051457.8_1	chr7	-	3638	1	ISM	ENSMUSG00000051457.8	ENSMUST00000049931.6	3743	2	477	7	477	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTTATGAAAAACATTGG	NA	NA	NA	NA	NA	NA	NA	NA	126736518	126732880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_126732900_126736500
ENSMUSG00000051469.15_0	chr18	-	5723	4	FSM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCCATGTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	24153860	24142760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153768
ENSMUSG00000051469.15_1	chr18	-	5633	3	ISM	ENSMUSG00000051469.15	ENSMUST00000066497.12	5732	4	2640	2	2150	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTGCCATGTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	24151227	24142760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_24147743_24150340_24150489_24150724
ENSMUSG00000051469.15_5	chr18	-	1481	4	FSM	ENSMUSG00000051469.15	ENSMUST00000153337.2	1513	4	22	10	22	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACCTAAATTTTTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	24153355	24146991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_24147743_24150340_24150489_24150724_24151226_24153274
ENSMUSG00000051483.10_0	chr16	+	1224	3	FSM	ENSMUSG00000051483.10	ENSMUST00000039659.9	1237	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGGAGCTCTGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	93404737	93407393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93405143_93405676_93405785_93406682
ENSMUSG00000051486.6_0	chr18	+	4389	1	FSM	ENSMUSG00000051486.6	ENSMUST00000053073.6	4419	1	25	5	25	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTATTTTCTTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37554495	37558884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37554500_37558900
ENSMUSG00000051495.9_0	chr8	-	5053	2	FSM	ENSMUSG00000051495.9	ENSMUST00000054960.9	5080	2	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACTGAATGTTTTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	127320707	127315043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_127318568_127319178
ENSMUSG00000051497.16_0	chr11	+	3659	2	FSM	ENSMUSG00000051497.16	ENSMUST00000106635.2	3671	2	9	3	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGTGTACATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110888321	110918791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_110888424_110915234
ENSMUSG00000051497.16_1	chr11	+	3559	1	NIC	ENSMUSG00000051497.16	novel	3701	3	NA	NA	547	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGTGTACATCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	110915232	110918791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_110915200_110918800
ENSMUSG00000051498.8_0	chr5	-	3668	2	FSM	ENSMUSG00000051498.8	ENSMUST00000062315.7	3677	2	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACAATGTGGTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	65117387	65109379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65112937_65117276
ENSMUSG00000051502.8_0	chr5	+	994	1	FSM	ENSMUSG00000051502.8	ENSMUST00000052825.7	1037	1	32	11	32	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGCTTACTATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	137292922	137293916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_137292900_137293900
ENSMUSG00000051504.19_0	chr7	+	547	2	FSM	ENSMUSG00000051504.19	ENST00000391797.3	559	2	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTGAGTTCAGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	55418162	55418909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55418470_55418669
ENSMUSG00000051510.14_0	chr11	-	4903	3	FSM	ENSMUSG00000051510.14	ENSMUST00000058162.14	4923	3	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGATCTGGTGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	120524413	120515949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120520563_120520643_120520708_120524187
ENSMUSG00000051517.15_0	chr4	-	1638	9	FSM	ENSMUSG00000051517.15	ENSMUST00000054538.13	1659	9	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCTTCCTGTCTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	43499678	43496145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43496721_43496820_43496910_43497086_43497317_43497581_43497711_43497958_43498030_43498585_43498705_43498895_43499017_43499242_43499338_43499469
ENSMUSG00000051518.9_0	chr15	-	825	4	FSM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGATTCAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80148510	80144822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80145332_80145497_80145596_80148183_80148319_80148427
ENSMUSG00000051518.9_1	chr15	-	743	3	ISM	ENSMUSG00000051518.9	ENSMUST00000052499.9	838	4	197	7	197	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGGATTCAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80148319	80144822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_80145332_80145497_80145596_80148183
ENSMUSG00000051527.12_0	chr7	+	7536	9	FSM	ENSMUSG00000051527.12	ENSMUST00000200535.6	7540	9	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATCTGCTGTTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6733581	6970214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6734302_6740563_6740634_6741791_6741945_6911284_6911385_6934759_6934822_6935598_6935683_6955220_6955297_6962961_6963149_6964130
ENSMUSG00000051550.11_0	chr7	-	2472	1	FSM	ENSMUSG00000051550.11	ENSMUST00000162731.2	2489	1	15	2	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCGAGTGAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4998324	4995852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4995900_4998300
ENSMUSG00000051550.11_1	chr7	-	2150	2	FSM	ENSMUSG00000051550.11	ENSMUST00000108572.2	2157	2	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCCGAGTGAGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	4999093	4995852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4997912_4999002
ENSMUSG00000051557.16_0	chr4	-	1224	8	FSM	ENSMUSG00000051557.16	ENSMUST00000097737.5	1243	8	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAGAGAACAAAAAGGTC	NA	NA	NA	NA	NA	NA	NA	NA	155976230	155973329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155973626_155973890_155974054_155974125_155974181_155974955_155975127_155975209_155975360_155975508_155975697_155975814_155975873_155976087
ENSMUSG00000051579.11_0	chrX	-	2341	4	FSM	ENSMUSG00000051579.11	ENSMUST00000163584.8	2358	4	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTCAGTTCCCAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	135072987	135069736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135071799_135072168_135072271_135072384_135072455_135072880
ENSMUSG00000051579.11_3	chrX	-	1230	3	FSM	ENSMUSG00000051579.11	ENSMUST00000060101.10	1250	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATAGACACACTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	135073081	135070839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135071799_135072384_135072455_135072880
ENSMUSG00000051586.18_0	chr6	-	9355	34	FSM	ENSMUSG00000051586.18	ENSMUST00000238968.2	9357	34	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAGAAATGAAAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	121058568	120908682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120911814_120911893_120911968_120912134_120912235_120928261_120928356_120929335_120929447_120934659_120934755_120935201_120937000_120937952_120938036_120938543_120938691_120939715_120939827_120943014_120943078_120946315_120946454_120948711_120948802_120950363_120950609_120959492_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121058369
ENSMUSG00000051586.18_1	chr6	-	2880	20	FSM	ENSMUSG00000051586.18	ENST00000414725.6	2891	20	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGATGCCCGTGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	121019212	120959489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120959689_120978568_120978657_120979747_120979837_120985955_120986143_120996656_120996741_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956
ENSMUSG00000051586.18_5	chr6	-	2851	18	FSM	ENSMUSG00000051586.18	ENSMUST00000077159.8	2875	18	23	1	23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCTATTTGTCCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	121058528	120984201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120984391_120985955_120986143_120998143_120998318_120999186_120999250_120999344_120999458_121001599_121001797_121003926_121004075_121006607_121006705_121007957_121008085_121010658_121010775_121010990_121011249_121013433_121013535_121014404_121014561_121014970_121015073_121015447_121015565_121017342_121017551_121018956_121019296_121058369
ENSMUSG00000051590.11_0	chr1	-	771	3	FSM	ENSMUSG00000051590.11	ENST00000392918.7	786	3	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCCCACTTTAAACCCCC	NA	NA	NA	NA	NA	NA	NA	NA	127748263	127742997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_127743075_127744971_127745558_127748155
ENSMUSG00000051596.16_0	chr5	+	1582	5	FSM	ENSMUSG00000051596.16	ENST00000612102.1	1598	5	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1920	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATCTAGCCTGAGTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	38434924	38460228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38435169_38445240_38445378_38455200_38455332_38456966_38457875_38460066
ENSMUSG00000051615.15_0	chr14	+	4167	2	FSM	ENSMUSG00000051615.15	ENSMUST00000062117.14	4191	2	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATGAAAATCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	120715867	120744594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_120716453_120741012
ENSMUSG00000051627.4_0	chr13	-	1903	1	FSM	ENSMUSG00000051627.4	ENSMUST00000062045.4	1930	1	15	12	15	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAAACTATGCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	23806526	23804623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23804600_23806500
ENSMUSG00000051648.14_0	chr8	-	2896	15	FSM	ENSMUSG00000051648.14	ENST00000304372.6	2925	15	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAGTAAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	106135248	106109459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106109702_106111362_106111465_106111654_106111810_106111961_106112154_106113381_106114010_106114397_106114513_106114822_106114907_106115096_106115240_106115675_106115775_106116911_106117073_106118504_106118716_106120457_106120590_106121902_106122095_106122961_106123113_106134959
ENSMUSG00000051650.12_0	chr11	-	3040	2	FSM	ENSMUSG00000051650.12	ENSMUST00000062844.11	3057	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATCACGTATAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	22810089	22784751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_22787196_22809493
ENSMUSG00000051650.12_1	chr11	-	2580	2	FSM	ENSMUSG00000051650.12	ENSMUST00000055549.4	2602	2	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTGCATATACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	22810475	22784873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_22787196_22810217
ENSMUSG00000051669.7_0	chr16	-	1359	8	FSM	ENSMUSG00000051669.7	ENSMUST00000050160.6	1368	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCAATTGGAGCTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5040163	5029695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_5030077_5030455_5030537_5032466_5032572_5033840_5033977_5034605_5034724_5035661_5035813_5038159_5038310_5039926
ENSMUSG00000051671.8_0	chr8	+	726	2	FSM	ENSMUSG00000051671.8	ENSMUST00000059093.7	747	2	12	9	-1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATAGGTTATTCTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	127149265	127152163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_127149570_127151741
ENSMUSG00000051674.16_0	chr5	+	4109	12	FSM	ENSMUSG00000051674.16	ENSMUST00000087181.12	4117	12	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73638342	73718129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73638438_73638550_73638612_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUSG00000051674.16_2	chr5	+	4016	11	ISM	ENSMUSG00000051674.16	ENSMUST00000087181.12	4117	12	206	8	206	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73638548	73718129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_73638612_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUSG00000051674.16_3	chr5	+	4110	11	FSM	ENSMUSG00000051674.16	ENSMUST00000063882.12	4116	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGATTTGTGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	73648377	73718129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73648535_73668228_73668300_73668469_73668510_73677458_73677574_73679995_73680088_73688846_73688918_73691948_73692041_73701389_73701499_73712701_73712807_73714596_73714700_73714974
ENSMUSG00000051675.14_0	chr4	+	3187	2	FSM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGATGGTCATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65523225	65534471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_65523307_65531365
ENSMUSG00000051675.14_1	chr4	+	3184	2	FSM	ENSMUSG00000051675.14	ENSMUST00000107366.2	3191	2	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGATGGTCATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65523225	65534471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_65523307_65531368
ENSMUSG00000051675.14_2	chr4	+	3106	1	ISM	ENSMUSG00000051675.14	ENSMUST00000050850.14	3194	2	8143	4	8143	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGATGGTCATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	65531365	65534471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_65531400_65534500
ENSMUSG00000051695.7_0	chr6	-	1813	1	FSM	ENSMUSG00000051695.7	ENSMUST00000053015.7	1830	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4411	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGCTTCGTATTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	86503293	86501480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86501500_86503300
ENSMUSG00000051705.14_0	chr9	-	3678	2	FSM	ENSMUSG00000051705.14	ENSMUST00000051039.5	3682	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGTGTGGTCTCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	59657932	59641545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_59645152_59657860
ENSMUSG00000051705.14_1	chr9	-	3606	1	NIC	ENSMUSG00000051705.14	novel	3682	2	NA	NA	12757	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAATTGTGTGGTCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	59645153	59641547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_59641500_59645200
ENSMUSG00000051705.14_2	chr9	-	1537	3	FSM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	1	21	1	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59657909	59643773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_59645152_59657544_59657655_59657860
ENSMUSG00000051705.14_3	chr9	-	1477	2	ISM	ENSMUSG00000051705.14	ENSMUST00000216329.2	1559	3	267	21	267	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAACAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	59657643	59643773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_59645152_59657544
ENSMUSG00000051721.7_0	chr12	+	4294	4	FSM	ENSMUSG00000051721.7	ENSMUST00000223551.2	4317	4	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATGGCAGCTCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	4893320	4910038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4893452_4900126_4901943_4905277_4905393_4907806
ENSMUSG00000051721.7_2	chr12	+	2872	2	FSM	ENSMUSG00000051721.7	ENSMUST00000053034.6	2892	2	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAAATCTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4893353	4902900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4893452_4900126
ENSMUSG00000051726.7_0	chr12	-	4763	1	FSM	ENSMUSG00000051726.7	ENSMUST00000170580.3	4789	1	15	11	15	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAACTAACCTGCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	17226874	17222111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_17222100_17226900
ENSMUSG00000051730.16_0	chr2	-	959	7	FSM	ENSMUSG00000051730.16	ENSMUST00000060447.13	968	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCATTTTCTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	69715951	69701542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69701661_69702075_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000051730.16_20	chr2	-	632	6	ISM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	8	409	8	-409	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATGGTCATTTCCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	69715693	69702026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000051730.16_3	chr2	-	656	7	FSM	ENSMUSG00000051730.16	ENST00000410097.5	670	7	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCTTCTGAAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69715693	69701623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69701648_69702026_69702126_69704227_69704280_69709445_69709529_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000051730.16_4	chr2	-	476	5	FSM	ENSMUSG00000051730.16	ENST00000308099.7	499	5	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCTTCTGAAGACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69715684	69701623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69701661_69702075_69702126_69711110_69711293_69711640_69711756_69715592
ENSMUSG00000051736.9_0	chr10	-	729	5	FSM	ENSMUSG00000051736.9	ENSMUST00000063204.9	745	5	9	7	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAATGGTTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	39009893	38994806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242_39008375_39009818
ENSMUSG00000051736.9_1	chr10	-	655	4	ISM	ENSMUSG00000051736.9	ENSMUST00000134279.8	700	5	1469	1	1469	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAATGGTTGACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	39008375	38994806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_38995031_38996253_38996393_38998172_38998332_39008242
ENSMUSG00000051736.9_2	chr10	-	691	5	FSM	ENSMUSG00000051736.9	ENSMUST00000125042.8	707	5	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCATCTCACGGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	39009880	38994863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_38995031_38996221_38996393_38998172_38998332_39008242_39008375_39009818
ENSMUSG00000051747.16_82	chr2	-	17060	46	FSM	ENSMUSG00000051747.16	ENST00000360870.10	17073	46	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCACCATGTATCATCC	NA	NA	NA	NA	NA	NA	NA	NA	76812879	76744336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_76750808_76751894_76751952_76757430_76757620_76762475_76762602_76762789_76763075_76764482_76764715_76766725_76766892_76766978_76767121_76767916_76768178_76768650_76768912_76769037_76769299_76769387_76769652_76770193_76770455_76772165_76772427_76772519_76772784_76773190_76773464_76773544_76773812_76774234_76774517_76774652_76776347_76776460_76776630_76776735_76776901_76777040_76777325_76778171_76778417_76778530_76778765_76779281_76779488_76780358_76780502_76781658_76781875_76781990_76782052_76782263_76782523_76783113_76783180_76783344_76783633_76784929_76785053_76785138_76785433_76794818_76794957_76795434_76795573_76796120_76796259_76797397_76797530_76798739_76798878_76799483_76799637_76799964_76800296_76804359_76804602_76804694_76804781_76805254_76805543_76807436_76807641_76810435_76810540_76812681
ENSMUSG00000051768.10_0	chr7	+	2520	19	FSM	ENSMUSG00000051768.10	ENSMUST00000205573.2	2528	19	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	24245720	24272859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24245796_24246123_24246261_24246417_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051768.10_16	chr7	+	1809	16	FSM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTACACCTGTGTACGTG	NA	NA	NA	NA	NA	NA	NA	NA	24246726	24272762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24246785_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051768.10_25	chr7	+	1745	15	ISM	ENSMUSG00000051768.10	ENST00000543982.5	1810	16	12439	2	12439	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGTACACCTGTGTACGT	NA	NA	NA	NA	NA	NA	NA	NA	24259165	24272761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051768.10_8	chr7	+	2141	17	FSM	ENSMUSG00000051768.10	ENSMUST00000063249.9	2155	17	10	4	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAACGGTTTCTCTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	24246584	24272859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24246785_24247214_24247308_24259160_24259278_24264960_24265120_24265643_24265719_24265813_24265926_24266282_24266393_24266463_24266570_24266738_24266998_24267234_24267352_24269640_24269735_24269873_24270004_24270296_24270352_24270439_24270577_24271633_24271725_24272478_24272555_24272649
ENSMUSG00000051786.16_0	chr15	-	7603	25	FSM	ENSMUSG00000051786.16	ENSMUST00000109353.9	7635	25	31	1	31	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGATGAGTTTGCTTAATG	NA	NA	NA	NA	NA	NA	NA	NA	89007259	88982560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88984707_88984787_88984988_88985068_88985283_88985355_88985489_88985564_88985760_88985977_88986120_88986203_88986373_88986456_88986611_88986747_88986807_88987019_88988494_88988621_88988694_88988936_88989076_88990274_88990391_88990471_88990561_88990645_88990728_88991615_88991766_88992153_88992294_88992763_88992856_88993149_88993260_88993423_88993500_88994248_88994371_88995318_88995493_89000247_89000459_89004712_89004877_89006279
ENSMUSG00000051790.16_0	chr11	-	4969	7	FSM	ENSMUSG00000051790.16	ENSMUST00000056484.10	5003	7	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTGGTTGTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	69725649	69713955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807
ENSMUSG00000051790.16_1	chr11	-	5562	8	FSM	ENSMUSG00000051790.16	ENSMUST00000108634.9	5568	8	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGTTGTCTCCTGTCGT	NA	NA	NA	NA	NA	NA	NA	NA	69728604	69713947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69716906_69717569_69718167_69718541_69718735_69718843_69719030_69719190_69719341_69721388_69721440_69724807_69725504_69727873
ENSMUSG00000051817.9_0	chr2	-	4439	1	FSM	ENSMUSG00000051817.9	ENSMUST00000182625.2	4453	1	4	10	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACCCAAACTCAGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	152239979	152235540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152235500_152240000
ENSMUSG00000051851.6_0	chrX	+	387	1	FSM	ENSMUSG00000051851.6	ENSMUST00000063384.4	401	1	9	5	9	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCTACCCCACCCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	52610007	52610394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_52610000_52610400
ENSMUSG00000051853.11_0	chr15	-	4550	5	FSM	ENSMUSG00000051853.11	ENSMUST00000053183.12	4566	5	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTTTCCTTTTCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	98661076	98634514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUSG00000051853.11_4	chr15	-	3412	6	FSM	ENSMUSG00000051853.11	ENST00000256682.9	3430	6	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCTTGAGCAACACTGCG	NA	NA	NA	NA	NA	NA	NA	NA	98661037	98635489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98636321_98636444_98638376_98638871_98638997_98639204_98639316_98640473_98640711_98660860
ENSMUSG00000051855.16_1	chr6	+	2542	12	FSM	ENSMUSG00000051855.16	ENSMUST00000163949.9	2561	12	9	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACAAAAATGGATTCCGG	NA	NA	NA	NA	NA	NA	NA	NA	30738057	30748451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30738335_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051855.16_10	chr6	+	2649	13	FSM	ENSMUSG00000051855.16	ENSMUST00000124665.3	2665	13	6	10	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGGATTCCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	30738057	30748454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30738335_30740238_30740343_30740668_30740824_30742139_30742220_30742526_30742605_30742714_30742852_30743012_30743072_30744352_30744394_30744860_30744932_30745080_30745183_30745828_30745906_30746260_30746325_30747050
ENSMUSG00000051864.11_0	chr15	+	3214	13	FSM	ENSMUSG00000051864.11	ENSMUST00000063414.9	3229	13	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTGGTCTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	86098667	86382697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_86098838_86118930_86118988_86119716_86120055_86123317_86123495_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051864.11_2	chr15	+	1784	11	FSM	ENSMUSG00000051864.11	ENST00000355704.7	1801	11	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTGAAAGAATAAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	86098682	86381516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_86098838_86119716_86120055_86176334_86176406_86183847_86183977_86185746_86185810_86195927_86196043_86235854_86235965_86250805_86250882_86275277_86275406_86333392_86333489_86381013
ENSMUSG00000051890.14_0	chr12	+	2602	13	FSM	ENSMUSG00000051890.14	ENSMUST00000063445.13	2620	13	0	18	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATAAAACTTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	69288605	69331388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69288788_69297526_69297598_69298144_69298263_69298701_69298821_69300465_69300545_69302948_69303033_69304796_69304881_69305342_69305402_69306274_69306388_69309922_69309996_69315015_69315101_69316599_69316653_69329906
ENSMUSG00000051910.14_0	chr7	-	2652	16	FSM	ENSMUSG00000051910.14	ENST00000528429.5	2658	16	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATACATCAGCAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	115465098	115076051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603_115400845_115465035
ENSMUSG00000051910.14_2	chr7	-	2586	15	ISM	ENSMUSG00000051910.14	ENSMUST00000166207.3	2825	16	44499	159	23104	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATACATCAGCAGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	115400841	115076051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_115076457_115085782_115086000_115088897_115089132_115111895_115112005_115140856_115141042_115143704_115143889_115149244_115149395_115178250_115178374_115179799_115179880_115196730_115196852_115258750_115258820_115261506_115261680_115300930_115301021_115376285_115376494_115400603
ENSMUSG00000051934.6_0	chr15	+	3076	13	FSM	ENSMUSG00000051934.6	ENSMUST00000063517.6	3096	13	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGACTCCTTAGCGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	99024450	99111090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99024769_99047514_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051934.6_3	chr15	+	2710	13	FSM	ENSMUSG00000051934.6	ENST00000552918.6	2734	13	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAAAATGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	99024677	99110909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99024781_99047484_99047812_99064960_99065041_99071282_99071392_99072282_99072333_99076187_99076447_99078461_99078642_99083839_99083976_99097088_99097148_99103478_99103589_99106713_99106817_99108762_99108978_99109930
ENSMUSG00000051950.11_0	chr5	+	4560	15	FSM	ENSMUSG00000051950.11	ENSMUST00000100404.6	4570	15	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTTTGGCTTCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149601703	149686063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149601845_149619889_149619940_149626743_149626784_149632784_149632895_149648875_149648953_149650218_149650331_149653388_149653526_149656137_149656202_149658834_149658955_149662996_149663067_149668890_149669005_149669969_149670070_149673895_149674016_149677529_149677675_149682903
ENSMUSG00000051977.17_0	chr17	-	1708	9	FSM	ENSMUSG00000051977.17	ENST00000449207.8	1717	9	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGAGTGTGGGCGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	15783198	15764981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15765623_15773613_15773808_15774949_15775018_15775348_15775621_15775827_15775930_15777562_15777709_15779280_15779335_15782676_15782785_15783075
ENSMUSG00000051977.17_2	chr17	-	1437	11	FSM	ENSMUSG00000051977.17	ENSMUST00000147532.8	1447	11	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGGAAAAATGAAAACAAGC	NA	NA	NA	NA	NA	NA	NA	NA	15784601	15773494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15773808_15774949_15775018_15775348_15775621_15775827_15775930_15777562_15777720_15777808_15777837_15779284_15779335_15782676_15782785_15783075_15783200_15783482_15783594_15784497
ENSMUSG00000051978.10_0	chr8	-	1479	5	ISM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	11398	4	11398	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCATATTTGTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	14128903	14077564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769
ENSMUSG00000051978.10_1	chr8	-	1550	6	FSM	ENSMUSG00000051978.10	ENSMUST00000110813.5	1557	6	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCATATTTGTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	14140298	14077564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_14078154_14080592_14080785_14083335_14083765_14114204_14114340_14128769_14128917_14140240
ENSMUSG00000051984.14_0	chr19	-	3720	25	FSM	ENSMUSG00000051984.14	ENST00000370345.8	3720	25	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGACTTACCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44532221	44505556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520259_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44531704_44531829_44532139
ENSMUSG00000051984.14_2	chr19	-	3636	24	ISM	ENSMUSG00000051984.14	ENST00000370345.8	3720	25	395	0	395	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGGACTTACCCTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	44531826	44505556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_44505928_44506078_44506151_44506582_44506700_44506956_44507104_44507339_44507399_44507611_44507927_44508861_44509022_44511443_44511606_44512098_44512273_44512867_44513014_44513559_44513687_44513914_44514094_44514654_44514755_44515043_44515143_44515436_44515512_44517104_44517336_44520119_44520259_44520732_44520895_44521032_44521133_44522679_44522823_44523126_44523271_44524143_44524240_44524496_44524693_44531704
ENSMUSG00000051989.12_0	chr16	+	509	4	FSM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAACTGCTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	92098173	92109921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_92098232_92102175_92102286_92107688_92107858_92109749
ENSMUSG00000051989.12_4	chr16	+	445	3	ISM	ENSMUSG00000051989.12	ENSMUST00000063641.11	517	4	4008	8	3998	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAACTGCTGTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	92102181	92109921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_92102286_92107688_92107858_92109749
ENSMUSG00000052031.9_0	chr17	-	2292	4	FSM	ENSMUSG00000052031.9	ENSMUST00000063683.8	2312	4	10	10	10	-10	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATTATCCACACACT	NA	NA	NA	NA	NA	NA	NA	NA	7228545	7222419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_7224424_7225052_7225168_7228135_7228190_7228426
ENSMUSG00000052033.14_0	chr2	+	921	4	FSM	ENSMUSG00000052033.14	ENSMUST00000063682.12	935	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCGTAGTATCCGAC	NA	NA	NA	NA	NA	NA	NA	NA	170353162	170361037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_170353390_170357658_170357767_170358469_170358611_170360592
ENSMUSG00000052040.11_0	chr7	-	6375	2	FSM	ENSMUSG00000052040.11	ENSMUST00000063694.10	6396	2	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTATTTTGTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	63588650	63536106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_63541546_63587714
ENSMUSG00000052056.15_0	chr2	-	5592	6	ISM	ENSMUSG00000052056.15	ENSMUST00000109155.8	5670	7	10936	3	-522	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTCTGGTGTCGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	169973662	169950568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576
ENSMUSG00000052056.15_1	chr2	-	5663	7	FSM	ENSMUSG00000052056.15	ENSMUST00000109155.8	5670	7	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTCTGGTGTCGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	169984594	169950568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_169952576_169954399_169954535_169955980_169957493_169958061_169958179_169960938_169962674_169973576_169973673_169984533
ENSMUSG00000052062.15_0	chr1	+	8378	23	NNC	ENSMUSG00000052062.15	novel	8392	23	NA	NA	11	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGATATCAGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	61677993	62681438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_+_61678522_61807106_61807209_62049463_62049638_62115543_62115654_62184005_62184095_62193091_62193179_62198593_62198720_62200268_62200628_62203238_62203379_62205512_62205642_62237735_62237922_62250692_62250864_62255581_62255715_62269337_62269438_62277995_62278112_62315041_62315087_62383092_62383300_62384028_62384267_62479169_62479281_62518657_62518955_62571803_62571940_62626895_62626976_62676724
ENSMUSG00000052085.8_0	chr19	+	1452	11	FSM	ENSMUSG00000052085.8	ENST00000382331.5	1458	11	1	5	1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTCTGCTAACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	25098477	25131662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_25098549_25100503_25100606_25104431_25104528_25104839_25105075_25107714_25107880_25109427_25109601_25114680_25114777_25117432_25117529_25124658_25124809_25127146_25127261_25131508
ENSMUSG00000052085.8_3	chr19	+	1381	10	ISM	ENSMUSG00000052085.8	ENST00000382331.5	1458	11	2027	5	2027	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTCTGCTAACTACAG	NA	NA	NA	NA	NA	NA	NA	NA	25100503	25131662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_25100606_25104431_25104528_25104839_25105075_25107714_25107880_25109427_25109601_25114680_25114777_25117432_25117529_25124658_25124809_25127146_25127261_25131508
ENSMUSG00000052099.15_0	chr14	+	706	4	FSM	ENSMUSG00000052099.15	ENST00000647727.1	719	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2428	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATCCTGGAGGAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	64332399	64334952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_64332572_64333358_64333619_64334506_64334644_64334815
ENSMUSG00000052102.16_0	chr18	-	2278	7	FSM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCAAATAAAATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	38472051	38460616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUSG00000052102.16_1	chr18	-	2074	6	FSM	ENSMUSG00000052102.16	ENSMUST00000235590.2	2085	6	0	11	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAATAAAATGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	38472029	38460613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_38462027_38463538_38463714_38466206_38466390_38468068_38468171_38471143_38471276_38471960
ENSMUSG00000052102.16_2	chr18	-	2187	6	ISM	ENSMUSG00000052102.16	ENSMUST00000063814.15	2289	7	781	6	754	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCAAATAAAATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	38471275	38460616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_38462027_38463538_38463714_38465020_38465206_38466206_38466390_38468068_38468171_38471143
ENSMUSG00000052105.18_1	chr17	-	5944	15	FSM	ENSMUSG00000052105.18	ENST00000359865.7	5953	15	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGAAAGCAACAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	66745380	66643991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673535_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_2	chr17	-	5815	14	FSM	ENSMUSG00000052105.18	ENST00000517570.5	5830	14	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTACAAGAAAGCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	66745378	66643995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673535_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_3	chr17	-	5945	15	NIC	ENSMUSG00000052105.18	novel	5953	15	NA	NA	9	-1	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAGAAAGCAACAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	66745379	66643991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_66645150_66647478_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673537_66675224_66675456_66678317_66678441_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161
ENSMUSG00000052105.18_63	chr17	-	5667	14	FSM	ENSMUSG00000052105.18	ENST00000306329.15	5680	14	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTAGCCCTGCCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	66756334	66647503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_66647536_66649820_66651361_66653348_66653381_66655237_66655517_66661117_66661373_66665016_66665185_66673338_66673535_66675224_66675456_66684847_66685007_66686123_66687432_66692854_66692915_66743074_66743234_66745161_66745387_66755311
ENSMUSG00000052125.17_0	chr12	-	3299	5	FSM	ENSMUSG00000052125.17	ENSMUST00000148740.8	3312	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATTTATTATCTGCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33197580	33183060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_33185457_33185964_33186043_33189571_33189786_33190954_33191116_33197130
ENSMUSG00000052133.17_0	chr16	+	4814	22	FSM	ENSMUSG00000052133.17	ENST00000648990.1	4835	22	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGAGGAAACAACCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	35361559	35484717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480438_35480527_35480754_35480849_35481069_35481661_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUSG00000052133.17_12	chr16	+	4553	22	FSM	ENSMUSG00000052133.17	ENST00000195173.8	4561	22	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAACTGTCTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	35361621	35484623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35361973_35442946_35443151_35448379_35448480_35453184_35453231_35465752_35465816_35466081_35466181_35466561_35466776_35467413_35467700_35470101_35470238_35471506_35471715_35471849_35472058_35478566_35478685_35478809_35478992_35480019_35480164_35480292_35480441_35480527_35480754_35480849_35481069_35481769_35481833_35481935_35482086_35482659_35482705_35483062_35483269_35483486
ENSMUSG00000052137.12_0	chr4	+	3313	4	FSM	ENSMUSG00000052137.12	ENSMUST00000063839.6	3327	4	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAAAATAAAATTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	12089451	12096240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_12089524_12089662_12089728_12092522_12092573_12093114
ENSMUSG00000052137.12_1	chr4	+	3237	3	FSM	ENSMUSG00000052137.12	ENSMUST00000095143.9	3147	3	230	-320	228	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAAAATTGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	12089668	12096242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_12089728_12092522_12092573_12093114
ENSMUSG00000052139.19_0	chr5	+	1876	12	FSM	ENSMUSG00000052139.19	ENSMUST00000201352.4	1888	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTTTGTCCTGAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	31855037	32242304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31855422_31859169_31859322_31888310_31888388_31942921_31943017_31977821_31978017_31988428_31988504_32058398_32058509_32158704_32158805_32162053_32162125_32164578_32164662_32214854_32215009_32241924
ENSMUSG00000052142.16_0	chr17	-	2793	15	FSM	ENSMUSG00000052142.16	ENST00000343625.12	2805	15	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCCTGCCCTTCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	32622315	32611018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_32611178_32611371_32611763_32612496_32612616_32612714_32612917_32613011_32613249_32614048_32614194_32614795_32614941_32615321_32615859_32616283_32616383_32616467_32616595_32616994_32617066_32617890_32617953_32618058_32618138_32618263_32618398_32622029
ENSMUSG00000052143.9_0	chr9	-	645	2	FSM	ENSMUSG00000052143.9	ENSMUST00000214999.2	679	2	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATCCTCCTGTATTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	60745454	60728840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_60729189_60745157
ENSMUSG00000052144.9_0	chr6	+	4857	9	FSM	ENSMUSG00000052144.9	ENSMUST00000063854.7	4874	9	8	9	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATGTTTTCACGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	100810590	100846886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217
ENSMUSG00000052144.9_1	chr6	+	4752	10	FSM	ENSMUSG00000052144.9	ENST00000356692.10	4770	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTAGATGAATGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	100810616	100846879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_100810879_100811677_100811760_100829445_100829617_100838370_100838465_100840083_100840122_100841639_100841715_100842034_100842179_100842748_100843045_100843217_100845343_100845414
ENSMUSG00000052146.17_0	chr17	-	866	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114882.9	887	6	10	11	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACATGTCCACTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	27854509	27849402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUSG00000052146.17_4	chr17	-	623	6	FSM	ENSMUSG00000052146.17	ENSMUST00000114881.9	644	6	5	16	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTTTAAAGAAAAACATG	NA	NA	NA	NA	NA	NA	NA	NA	27855638	27849413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27849481_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27855538
ENSMUSG00000052151.13_0	chr10	-	1644	6	FSM	ENSMUSG00000052151.13	ENSMUST00000063879.13	1654	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCATGTTGATTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	79369620	79362263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366863_79369457
ENSMUSG00000052151.13_3	chr10	-	1545	6	FSM	ENSMUSG00000052151.13	ENSMUST00000166804.2	1566	6	13	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTCTGCCATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	79369581	79362276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79363083_79363283_79363461_79363648_79363707_79366331_79366607_79366710_79366816_79369457
ENSMUSG00000052155.6_0	chr2	+	2259	11	FSM	ENSMUSG00000052155.6	ENSMUST00000063886.4	5686	11	582	2845	431	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAATCAGTCCATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	48704702	48790436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_1	chr2	+	5065	11	FSM	ENSMUSG00000052155.6	ENST00000535787.5	5081	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATTATTTGCACATGC	NA	NA	NA	NA	NA	NA	NA	NA	48704177	48793272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_48704347_48760363_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052155.6_15	chr2	+	2323	12	FSM	ENSMUSG00000052155.6	ENST00000404590.1	2338	12	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAATAAATCAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	48704275	48790431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_48704347_48704704_48704839_48760300_48760509_48763068_48763179_48763330_48763486_48780309_48780454_48782140_48782285_48783518_48783665_48784677_48784793_48786983_48787123_48788489_48788621_48789605
ENSMUSG00000052214.10_0	chr7	+	3349	2	FSM	ENSMUSG00000052214.10	ENSMUST00000063976.9	3366	2	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGAAGCTGGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	18962265	18981783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18962510_18978678
ENSMUSG00000052214.10_1	chr7	+	1368	2	FSM	ENSMUSG00000052214.10	ENSMUST00000161711.2	1390	2	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAAAGAGTGTCTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	18962324	18990463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_18962510_18989280
ENSMUSG00000052248.18_0	chr2	+	787	3	FSM	ENSMUSG00000052248.18	ENST00000609842.5	803	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACGCTTTAGTGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	45000957	45003261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_45001315_45002726_45003006_45003110
ENSMUSG00000052253.7_1	chr15	+	2792	6	FSM	ENSMUSG00000052253.7	ENSMUST00000061875.8	2802	6	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	2027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGATCTCTTCTAGGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25984461	25998567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_25985270_25986883_25987133_25987246_25987410_25991538_25991652_25996191_25996336_25997252
ENSMUSG00000052293.15_0	chr13	+	1861	1	NIC	ENSMUSG00000078941.10	novel	1298	5	NA	NA	2810	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTTTGATTCTTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	100790697	100792558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_100790700_100792600
ENSMUSG00000052296.8_0	chr7	-	3843	24	FSM	ENSMUSG00000052296.8	ENSMUST00000064099.8	3862	24	0	19	0	-19	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAGATAGCAGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	4662018	4634512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4635244_4635339_4635397_4635487_4635599_4636057_4636140_4636271_4636343_4636467_4636601_4636692_4636824_4638963_4639137_4639214_4639273_4642512_4642611_4642689_4642780_4642891_4642978_4643071_4643188_4643307_4643373_4644044_4644180_4644263_4644417_4644503_4644667_4644926_4645041_4645134_4645248_4645999_4646066_4646147_4646286_4646367_4646555_4649706_4649940_4661479
ENSMUSG00000052298.13_0	chr11	-	3060	6	FSM	ENSMUSG00000052298.13	ENSMUST00000064104.13	3069	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTGTTTGGATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	54678493	54608282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_54610551_54611068_54611184_54614399_54614502_54631063_54631377_54647231_54647386_54678385
ENSMUSG00000052299.10_0	chr16	-	7734	30	FSM	ENSMUSG00000052299.10	ENSMUST00000039449.9	7743	30	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCCCATTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	87229492	87173539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_87175896_87176563_87176732_87177554_87177750_87178349_87178571_87179502_87179675_87191409_87191597_87194041_87194117_87194674_87194913_87195539_87195754_87196900_87197052_87197216_87197353_87198913_87199057_87200893_87200999_87202413_87202574_87205587_87205775_87206189_87206335_87207194_87207349_87208506_87208747_87209262_87209450_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ENSMUSG00000052299.10_8	chr16	-	2335	12	FSM	ENSMUSG00000052299.10	ENSMUST00000232095.2	2360	12	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGGGTCTCTCTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	87229433	87210082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_87210177_87212041_87212084_87212438_87213249_87215322_87215459_87217060_87217252_87217696_87217871_87220285_87220467_87221716_87221770_87222455_87222687_87223133_87223233_87224476_87224681_87229313
ENSMUSG00000052301.15_0	chr7	+	1650	11	FSM	ENSMUSG00000052301.15	ENST00000564944.5	1660	11	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGGACGTTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	126447138	126451565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126447205_126447748_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052301.15_10	chr7	+	1582	10	ISM	ENSMUSG00000052301.15	ENST00000564944.5	1660	11	613	9	613	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGGACGTTTCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	126447750	126451565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_126448035_126448391_126448472_126448653_126448729_126448833_126448944_126450105_126450233_126450311_126450372_126450454_126450619_126450708_126450791_126450880_126450978_126451062
ENSMUSG00000052310.10_0	chr3	+	2353	4	FSM	ENSMUSG00000052310.10	ENSMUST00000015467.9	2364	4	6	5	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTTCTATGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	90155484	90160914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90155567_90156252_90156471_90156632_90156764_90158992
ENSMUSG00000052310.10_3	chr3	+	2248	4	FSM	ENSMUSG00000052310.10	ENST00000368623.7	2284	4	31	5	31	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTTCTATGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	90155958	90160914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90156471_90156632_90156764_90158992_90160208_90160524
ENSMUSG00000052310.10_6	chr3	+	1814	3	FSM	ENSMUSG00000052310.10	ENST00000537590.5	1830	3	11	5	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTTCTATGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	90156261	90160914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90156471_90158992_90160208_90160524
ENSMUSG00000052310.10_7	chr3	+	2273	3	ISM	ENSMUSG00000052310.10	ENST00000310483.10	1950	4	-7	1	0	-1	intron_retention	FALSE	canonical	NA	NA	NA	NA	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACTTCTATGGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	90156250	90160914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90156471_90156632_90156764_90158992
ENSMUSG00000052331.15_0	chr1	-	3227	25	FSM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGCAAAGAATATTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54831687	54691880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611
ENSMUSG00000052331.15_19	chr1	-	2384	17	FSM	ENSMUSG00000052331.15	ENST00000409153.5	2401	17	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTGCAGCACACAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	54965470	54756805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_54757359_54762136_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445_54817517_54831611_54831691_54867770_54867855_54965298
ENSMUSG00000052331.15_2	chr1	-	3152	24	ISM	ENSMUSG00000052331.15	ENST00000328737.6	3241	25	14174	10	14174	-10	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGCAAAGAATATTAGAG	NA	NA	NA	NA	NA	NA	NA	NA	54817517	54691880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_54692355_54692865_54692985_54694238_54694322_54694819_54694966_54696774_54696859_54698077_54698166_54700159_54700377_54701812_54701931_54703057_54703146_54706530_54706733_54720278_54720351_54762172_54762285_54766648_54766730_54768892_54769034_54772086_54772156_54774154_54774219_54775388_54775472_54782472_54782588_54792048_54792128_54801419_54801633_54802803_54802947_54805508_54805597_54805942_54806144_54817445
ENSMUSG00000052337.16_0	chr6	+	2705	15	FSM	ENSMUSG00000052337.16	ENSMUST00000064062.13	2728	15	12	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAGCAACACAATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	71808326	71852217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829713_71829852_71830156_71830253_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_22	chr6	+	2452	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166975.8	2469	13	8	9	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAATGAAAACTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	71808324	71852225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849879_71851300
ENSMUSG00000052337.16_36	chr6	+	2500	13	FSM	ENSMUSG00000052337.16	ENSMUST00000114151.10	2518	13	7	11	-1	2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAACTGAGTACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	71808400	71852230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71829746_71829852_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052337.16_52	chr6	+	2394	13	FSM	ENSMUSG00000052337.16	ENSMUST00000166938.8	2413	13	10	9	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACAATGAAAACTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	71808411	71852225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71808500_71821622_71821697_71823269_71823460_71828755_71828865_71833895_71834033_71837986_71838091_71839328_71839465_71840124_71840255_71843709_71843725_71845563_71845788_71848410_71848543_71849777_71849908_71851300
ENSMUSG00000052353.14_0	chr7	-	7071	29	FSM	ENSMUSG00000052353.14	ENSMUST00000064174.12	7111	29	34	6	34	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCATTGTCTTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	83735676	83582070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_83584957_83586594_83586696_83591213_83591372_83592826_83592914_83593089_83593295_83596355_83596542_83597787_83598000_83600610_83600827_83601994_83602176_83604428_83604585_83604665_83604702_83606795_83606928_83607716_83607803_83610750_83610880_83612252_83612323_83613193_83613400_83622380_83622591_83624247_83624424_83631399_83631592_83632341_83632475_83636545_83636668_83637167_83637264_83638340_83638412_83641225_83641406_83646429_83646667_83647698_83647838_83648316_83648464_83652519_83652630_83735465
ENSMUSG00000052364.5_0	chrX	+	2544	1	FSM	ENSMUSG00000052364.5	ENSMUST00000064196.5	2583	1	33	6	33	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCATTTCGTTGTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	8758653	8761197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_8758700_8761200
ENSMUSG00000052369.9_0	chr15	+	1442	8	FSM	ENSMUSG00000052369.9	ENSMUST00000229428.2	1455	8	9	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATCTGCACTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	97862118	97868151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97862217_97862720_97862912_97864127_97864192_97864817_97864978_97865067_97865209_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052369.9_6	chr15	+	1010	7	FSM	ENSMUSG00000052369.9	ENST00000256686.10	1023	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGACGTATGGGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	97862738	97867892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97862912_97864127_97864192_97864817_97864978_97865067_97865152_97865957_97866008_97866489_97866544_97867467
ENSMUSG00000052374.17_0	chr13	-	2998	21	FSM	ENSMUSG00000052374.17	ENSMUST00000064204.14	3013	21	6	9	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGGAAACTTTGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	12355635	12284320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12284539_12285663_12285823_12287584_12287651_12289963_12290111_12291248_12291429_12292284_12292420_12293679_12293863_12295314_12295456_12297400_12297510_12303392_12303544_12305559_12305708_12306545_12306777_12309195_12309289_12311360_12311447_12315820_12315903_12319199_12319279_12321159_12321248_12323785_12323873_12324480_12324601_12325732_12325848_12355255
ENSMUSG00000052395.18_0	chr14	+	2355	13	FSM	ENSMUSG00000052395.18	ENSMUST00000064230.16	2387	13	9	23	9	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	30376325	30413251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30376433_30380265_30380352_30382153_30382271_30383227_30383418_30385034_30385137_30388635_30388774_30396126_30396206_30398806_30398858_30399643_30399775_30401187_30401333_30404707_30404814_30411661_30411912_30412398
ENSMUSG00000052396.8_0	chr7	-	1764	6	FSM	ENSMUSG00000052396.8	ENSMUST00000064231.8	1780	6	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCCTTCTTTTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98887812	98868292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98869167_98871459_98871660_98872199_98872375_98872707_98872913_98881664_98881844_98887681
ENSMUSG00000052397.9_0	chr17	-	3147	13	FSM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGACAGTGTTGAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	7050174	7005447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246_7023343_7026877_7026962_7050030
ENSMUSG00000052397.9_15	chr17	-	2380	11	ISM	ENSMUSG00000052397.9	ENSMUST00000064234.7	3164	13	26843	545	5	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGACACAGGGGCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	7023340	7005984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_7006867_7007028_7007281_7008361_7008455_7008819_7008981_7009752_7009884_7010088_7010253_7014662_7014760_7020381_7020529_7021384_7021469_7022009_7022285_7023246
ENSMUSG00000052406.15_0	chr2	-	2261	8	FSM	ENSMUSG00000052406.15	ENSMUST00000114020.10	2278	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGATCAAATGGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	26854388	26843584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26844609_26845506_26845582_26846300_26846376_26848490_26848580_26850235_26850430_26850614_26850753_26852394_26852736_26854063
ENSMUSG00000052407.18_0	chr4	+	4520	26	FSM	ENSMUSG00000052407.18	ENSMUST00000231339.2	4549	26	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTTTTAAATGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	83443803	83782900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_83444008_83454026_83454175_83465070_83465207_83467839_83468015_83472930_83473122_83476135_83476268_83498984_83499132_83519844_83519938_83522258_83522420_83539061_83539201_83553876_83553980_83573764_83573872_83575548_83575639_83576557_83576759_83579952_83580121_83581738_83581928_83599241_83599747_83600535_83600653_83611983_83612211_83612489_83612673_83614487_83614674_83661164_83661311_83670090_83670146_83713436_83713569_83736236_83736390_83782468
ENSMUSG00000052414.10_0	chr15	-	1390	11	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	31332	6	31332	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGAGTTCCAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102502170	102432570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102432707_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465890_102466014_102471748_102471846_102502106
ENSMUSG00000052414.10_1	chr15	-	1329	10	ISM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	61654	6	61654	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGAGTTCCAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102471848	102432570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102432707_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465890_102466014_102471748
ENSMUSG00000052414.10_2	chr15	-	1424	12	FSM	ENSMUSG00000052414.10	ENST00000591834.1	1430	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTGAGTTCCAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	102533502	102432570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102432707_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465890_102466014_102471748_102471846_102502106_102502176_102533473
ENSMUSG00000052419.8_0	chr6	-	3173	3	FSM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTTATTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	13871513	13867733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13870740_13871054_13871146_13871437
ENSMUSG00000052419.8_1	chr6	-	3097	2	ISM	ENSMUSG00000052419.8	ENSMUST00000139231.2	3177	3	372	0	319	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTTTATTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	13871145	13867733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_13870740_13871054
ENSMUSG00000052419.8_2	chr6	-	1072	3	FSM	ENSMUSG00000052419.8	ENSMUST00000155856.2	1077	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCACCTATTGTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	13871465	13869803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_13870740_13871054_13871163_13871437
ENSMUSG00000052423.16_0	chr1	+	1992	8	FSM	ENSMUSG00000052423.16	ENSMUST00000064272.10	1998	8	4	2	4	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171097901	171104466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171097985_171098772_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUSG00000052423.16_6	chr1	+	1911	7	ISM	ENSMUSG00000052423.16	ENSMUST00000111313.10	2098	9	858	3	836	-2	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGCTTGTGATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	171098770	171104466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_171098944_171099276_171099572_171100090_171100327_171101522_171101714_171101835_171101959_171103454_171103560_171103678
ENSMUSG00000052428.11_0	chr1	+	1558	7	FSM	ENSMUSG00000052428.11	ENSMUST00000195015.6	1573	7	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCAGCCTTGTCTCCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	167135958	167158351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_167136503_167136874_167136953_167141675_167141736_167143811_167143859_167146830_167146899_167153444_167153590_167157735
ENSMUSG00000052446.18_0	chr8	+	2682	4	FSM	ENSMUSG00000052446.18	ENSMUST00000131237.8	2689	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCCAGTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	72704881	72724170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72704948_72719637_72719765_72719943_72720005_72721742
ENSMUSG00000052446.18_1	chr8	+	592	3	FSM	ENSMUSG00000052446.18	ENSMUST00000136516.9	601	3	2	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGTTGCCCTTAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	72704912	72722115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72705005_72719637_72719765_72721742
ENSMUSG00000052446.18_2	chr8	+	2696	4	FSM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCCAGTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	72704924	72724170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72705005_72719637_72719765_72719943_72720005_72721742
ENSMUSG00000052446.18_3	chr8	+	2611	3	ISM	ENSMUSG00000052446.18	ENSMUST00000109997.10	2713	4	14728	7	14708	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTCCAGTTTGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	72719642	72724170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_72719765_72719943_72720005_72721742
ENSMUSG00000052456.10_0	chr8	-	1242	7	FSM	ENSMUSG00000052456.10	ENSMUST00000064314.10	1256	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCTGTGTTTGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	85751901	85744564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85744885_85745150_85745349_85745439_85745548_85746150_85746302_85746388_85746538_85750806_85750955_85751733
ENSMUSG00000052459.14_0	chr16	-	4212	15	FSM	ENSMUSG00000052459.14	ENSMUST00000114666.9	4234	15	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATTAACTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	43959657	43905775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959324
ENSMUSG00000052459.14_4	chr16	-	3881	15	FSM	ENSMUSG00000052459.14	ENSMUST00000063661.13	3896	15	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTATGCAGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	43959549	43906012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_43907880_43909268_43909441_43911533_43911629_43919089_43919294_43920304_43920369_43921927_43922043_43922125_43922249_43927297_43927407_43928087_43928251_43929857_43930010_43931457_43931596_43931860_43932076_43934976_43935106_43937149_43937246_43959310
ENSMUSG00000052485.8_0	chr13	-	1154	4	FSM	ENSMUSG00000052485.8	ENSMUST00000064347.8	1161	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTGGCTGTGTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98831342	98822749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98823025_98824855_98824992_98828511_98829226_98831313
ENSMUSG00000052485.8_1	chr13	-	1109	3	ISM	ENSMUSG00000052485.8	ENSMUST00000064347.8	1161	4	2133	7	2133	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTGGCTGTGTTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	98829209	98822749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_98823025_98824855_98824992_98828511
ENSMUSG00000052488.8_0	chr8	-	3648	17	ISM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	337	0	337	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73228626	73214332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455
ENSMUSG00000052488.8_1	chr8	-	3710	18	FSM	ENSMUSG00000052488.8	ENSMUST00000079510.6	3713	18	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTCCTCTAGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	73228960	73214332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222364_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUSG00000052488.8_6	chr8	-	3640	18	FSM	ENSMUSG00000052488.8	ENSMUST00000212991.2	3646	18	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATCATATAAGACACTTG	NA	NA	NA	NA	NA	NA	NA	NA	73229070	73214479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_73215200_73215279_73215466_73215592_73215688_73215823_73215947_73216020_73216165_73216247_73216335_73216644_73216779_73216921_73217161_73217927_73218364_73220226_73220403_73221606_73221887_73222043_73222134_73222218_73222331_73223707_73223860_73223933_73224072_73224714_73224900_73228455_73228630_73228901
ENSMUSG00000052504.8_0	chr16	-	3051	17	FSM	ENSMUSG00000052504.8	ENST00000494014.1	3074	17	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGAATTGAAAAATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	63684475	63366365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_63366600_63372949_63373009_63386941_63387136_63388750_63388901_63403750_63403961_63405319_63405382_63415920_63416107_63418552_63418679_63422623_63422692_63423893_63423997_63431308_63431472_63433212_63433338_63472577_63472914_63473785_63473942_63593272_63593934_63664465_63664531_63684322
ENSMUSG00000052512.18_0	chr7	+	11309	38	FSM	ENSMUSG00000052512.18	ENSMUST00000064395.13	11317	38	4	4	4	-4	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATACTGGTGGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48895940	49259831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_48896947_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111659_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49202587_49202654_49203962_49204008_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222207_49225391_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ENSMUSG00000052512.18_17	chr7	+	10646	38	NNC	ENSMUSG00000052512.18	novel	10665	39	NA	NA	7	-4	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATACTGGTGGTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48896598	49259831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_48896947_49011845_49011964_49022064_49022118_49047830_49047904_49058380_49058655_49069921_49070089_49102146_49103255_49107843_49107957_49111659_49111766_49114287_49114678_49141116_49141240_49185641_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49202587_49202654_49203962_49204008_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222206_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ENSMUSG00000052512.18_29	chr7	+	4734	26	FSM	ENSMUSG00000052512.18	ENST00000533917.5	4749	26	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAAAGGGTTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	49185650	49256871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49185781_49195547_49195840_49197586_49198290_49201344_49201798_49203962_49204008_49206657_49206819_49208455_49208645_49213818_49213872_49214832_49214857_49214953_49215029_49220439_49220524_49220881_49220994_49222055_49222202_49225395_49225569_49232551_49232706_49233797_49233961_49234891_49234993_49237454_49237551_49238897_49239067_49243964_49244201_49246902_49247058_49247249_49247322_49248024_49248222_49248511_49248631_49254172_49254377_49256443
ENSMUSG00000052516.20_1	chr16	-	4956	25	FSM	ENSMUSG00000052516.20	ENST00000332191.12	4984	25	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGCTACTCTTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	73843798	73691662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_73692719_73693894_73694096_73701270_73701445_73703704_73703888_73712985_73713192_73717421_73717683_73724911_73725066_73730474_73730757_73735618_73735747_73737143_73737187_73745090_73745274_73753375_73753548_73755191_73755317_73758566_73758799_73764655_73764778_73767941_73768109_73770040_73770204_73770592_73770675_73775295_73775502_73778868_73779041_73782475_73782601_73812758_73812887_73831872_73832012_73842709_73842831_73843667
ENSMUSG00000052516.20_10	chr16	-	5977	26	FSM	ENSMUSG00000052516.20	ENSMUST00000117200.8	5988	26	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATAACAGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	74208174	73691247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_73692719_73693894_73694096_73701270_73701445_73712985_73713192_73717421_73717683_73724911_73725066_73730474_73730757_73735618_73735747_73737143_73737187_73745090_73745274_73753375_73753548_73755191_73755317_73758566_73758799_73764655_73764778_73767941_73768109_73770040_73770204_73770592_73770675_73775295_73775502_73778868_73779041_73782475_73782601_73812758_73812887_73831872_73832012_73842709_73842831_73843667_73843826_74149438_74149766_74207739
ENSMUSG00000052525.15_0	chr17	+	1868	7	FSM	ENSMUSG00000052525.15	ENSMUST00000167641.8	1891	7	7	16	-4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAACCCTGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	71859062	71896512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71859137_71863234_71863485_71865615_71865675_71869497_71869584_71876011_71876184_71885096_71885389_71895577
ENSMUSG00000052525.15_1	chr17	+	925	6	FSM	ENSMUSG00000052525.15	ENSMUST00000144142.2	933	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATGACAAGGCTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	71863252	71895661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_71863485_71865615_71865675_71869497_71869584_71876011_71876184_71885096_71885389_71895577
ENSMUSG00000052533.15_0	chr2	+	5702	44	FSM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCCTGTGTCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30176408	30234270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ENSMUSG00000052533.15_3	chr2	+	526	7	FSM	ENSMUSG00000052533.15	ENSMUST00000113634.3	534	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAAACTACTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30176438	30193813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30176483_30186659_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671
ENSMUSG00000052533.15_4	chr2	+	475	6	ISM	ENSMUSG00000052533.15	ENSMUST00000113634.3	534	7	10228	8	10228	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAAACTACTTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30186666	30193813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30193671
ENSMUSG00000052533.15_5	chr2	+	5630	43	ISM	ENSMUSG00000052533.15	ENSMUST00000064447.12	5710	44	10249	8	10219	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGAGCCTGTGTCATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30186657	30234270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30186715_30188427_30188502_30190811_30190897_30191020_30191102_30192012_30192058_30194068_30194162_30194293_30194414_30197532_30197745_30199230_30199346_30199889_30200091_30202611_30202702_30205127_30205194_30206499_30206620_30207192_30207320_30211893_30212047_30212183_30212311_30212497_30212586_30212682_30212760_30213531_30213647_30215239_30215361_30215484_30215552_30216461_30216591_30217459_30217600_30219318_30219426_30220568_30220776_30220858_30221029_30222396_30222467_30222831_30222900_30223281_30223478_30226335_30226414_30226653_30226740_30226943_30227090_30227235_30227418_30229510_30229712_30229827_30229921_30230600_30230760_30231703_30231842_30232384_30232460_30232544_30232803_30232933_30233066_30233286_30233361_30233472_30233603_30233713
ENSMUSG00000052534.16_0	chr1	-	6211	7	ISM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	127228	-4392	127228	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATACACAC	NA	NA	NA	NA	NA	NA	NA	NA	168037166	167981119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316_168023453_168030915_168031107_168036919
ENSMUSG00000052534.16_17	chr1	-	1905	8	FSM	ENSMUSG00000052534.16	ENST00000560641.5	1920	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCTATGAACATCCAACCA	NA	NA	NA	NA	NA	NA	NA	NA	168164384	167985516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316_168023453_168030915_168031107_168036919_168037165_168164291
ENSMUSG00000052534.16_21	chr1	-	6867	9	NNC	ENSMUSG00000052534.16	novel	6876	9	NA	NA	2	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAATATATATACACAC	NA	NA	NA	NA	NA	NA	NA	NA	168259464	167981119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_167986394_168011098_168011189_168012524_168012638_168018846_168019007_168023316_168023453_168030915_168031107_168036919_168037167_168255437_168255512_168258882
ENSMUSG00000052534.16_44	chr1	-	1820	8	NNC	ENSMUSG00000052534.16	novel	1828	8	NA	NA	9	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTGGTGGTTTGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	168259310	167985899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_167986394_168011098_168011189_168018846_168019007_168023316_168023453_168030915_168031107_168036919_168037167_168255437_168255512_168258882
ENSMUSG00000052539.16_2	chr3	-	3655	21	FSM	ENSMUSG00000052539.16	ENST00000369617.8	3673	21	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGCCTAACAACCACATTT	NA	NA	NA	NA	NA	NA	NA	NA	104127349	103923798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103924009_103924816_103924956_103927593_103927738_103928252_103928380_103929090_103929194_103935113_103935300_103941321_103941505_103945852_103946046_103950527_103950620_103954171_103954329_103956459_103956492_103958108_103958715_103961657_103961847_103963828_103963971_103968947_103969006_103987452_103987533_103992523_103992702_103996774_103996985_104002380_104002501_104013046_104013164_104126960
ENSMUSG00000052560.16_0	chr15	-	3346	20	FSM	ENSMUSG00000052560.16	ENSMUST00000064391.12	3366	20	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAGGATAGCTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	90563625	90371695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90373379_90381267_90381342_90384087_90384146_90385613_90385717_90393697_90393826_90400110_90400293_90406110_90406158_90424434_90424497_90425459_90425514_90436176_90436253_90452451_90452494_90453662_90453768_90456147_90456252_90469080_90469145_90486015_90486093_90499313_90499354_90503834_90503939_90532780_90532828_90533445_90533487_90563370
ENSMUSG00000052560.16_5	chr15	-	679	4	FSM	ENSMUSG00000052560.16	ENSMUST00000014777.9	697	4	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	90563574	90527529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90527917_90532780_90532828_90533445_90533487_90563370
ENSMUSG00000052566.9_0	chr8	+	2561	22	FSM	ENSMUSG00000052566.9	ENSMUST00000064495.8	2580	22	12	7	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTATGAGCGTTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	85717257	85729971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85717382_85717847_85717934_85718005_85718079_85719812_85719864_85719952_85720086_85720203_85720272_85720616_85720680_85721089_85721171_85721250_85721412_85721504_85721646_85722364_85722567_85723583_85723695_85723792_85723881_85724007_85724078_85724628_85724767_85724832_85724921_85725118_85725154_85727783_85727867_85727949_85728054_85729132_85729244_85729315_85729388_85729493
ENSMUSG00000052572.20_0	chr7	+	411	4	FSM	ENSMUSG00000052572.20	ENST00000530800.5	431	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1081	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAAGAATCCACAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	91935707	92064828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_91935814_92024761_92024939_92036122_92036199_92064776
ENSMUSG00000052584.11_0	chr14	-	725	3	FSM	ENSMUSG00000052584.11	ENSMUST00000064517.9	748	3	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAATACCATGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	76794095	76770259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76770687_76787421_76787495_76793870
ENSMUSG00000052584.11_1	chr14	-	687	2	FSM	ENSMUSG00000052584.11	ENSMUST00000228055.2	705	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAATACCATGTGCGA	NA	NA	NA	NA	NA	NA	NA	NA	76794130	76770259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76770687_76793870
ENSMUSG00000052593.17_0	chr12	-	4439	20	FSM	ENSMUSG00000052593.17	ENSMUST00000101551.10	4469	20	19	11	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAACATGAATGATACGAG	NA	NA	NA	NA	NA	NA	NA	NA	21423575	21373520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21396017_21396075_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUSG00000052593.17_2	chr12	-	4431	19	FSM	ENSMUSG00000052593.17	ENSMUST00000064536.13	4443	19	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAACATGAATGATACGAG	NA	NA	NA	NA	NA	NA	NA	NA	21423624	21373520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21375628_21376119_21376171_21378045_21378135_21379054_21379134_21380033_21380165_21382076_21382212_21382570_21382675_21383954_21384155_21386633_21386787_21390472_21390562_21390675_21390821_21392864_21392979_21395621_21395712_21397297_21397432_21399785_21399955_21401543_21401633_21403883_21404015_21411659_21411793_21423336
ENSMUSG00000052605.13_0	chr7	-	1068	6	FSM	ENSMUSG00000052605.13	ENSMUST00000064547.13	1080	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGGACCGAACCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	4869185	4847962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4848365_4852448_4852567_4853753_4853825_4854022_4854233_4854391_4854533_4869059
ENSMUSG00000052609.10_0	chr12	+	5113	19	FSM	ENSMUSG00000052609.10	ENSMUST00000075249.6	5138	19	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACCAACCTGTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	76580169	76625807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76580593_76606902_76607293_76608979_76609078_76610528_76610599_76610870_76610918_76611030_76611182_76611275_76611408_76611571_76611755_76611932_76612026_76612265_76612353_76612557_76612592_76612941_76613041_76617860_76617951_76618377_76618417_76618823_76618844_76619168_76619433_76620020_76620135_76622630_76624051_76624448
ENSMUSG00000052616.11_0	chr8	-	2188	17	FSM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTGTGACTGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	105234475	105173784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105173963_105178426_105178493_105179256_105179407_105195359_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598_105224728_105225124_105225236_105234421
ENSMUSG00000052616.11_1	chr8	-	2127	16	ISM	ENSMUSG00000052616.11	ENST00000558713.6	2191	17	9247	3	9247	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTGTGACTGGAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	105225228	105173784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_105173963_105178426_105178493_105179256_105179407_105195359_105195453_105195742_105195805_105199317_105199665_105208804_105208960_105210908_105211035_105211988_105212121_105215118_105215272_105221501_105221625_105221718_105221835_105221933_105221995_105223403_105223536_105224598_105224728_105225124
ENSMUSG00000052631.16_0	chr6	-	1375	16	FSM	ENSMUSG00000052631.16	ENSMUST00000234615.2	1381	16	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTCTCTCTTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	72498690	72490640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72491025_72492208_72492368_72492524_72492609_72492903_72492963_72493371_72493397_72493524_72493556_72494089_72494169_72494532_72494585_72494920_72494944_72495893_72495952_72496743_72496866_72497437_72497568_72497663_72497735_72498126_72498162_72498508_72498535_72498653
ENSMUSG00000052631.16_1	chr6	-	1338	15	ISM	ENSMUSG00000052631.16	ENSMUST00000234615.2	1381	16	156	6	156	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTCTCTCTTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	72498534	72490640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_72491025_72492208_72492368_72492524_72492609_72492903_72492963_72493371_72493397_72493524_72493556_72494089_72494169_72494532_72494585_72494920_72494944_72495893_72495952_72496743_72496866_72497437_72497568_72497663_72497735_72498126_72498162_72498508
ENSMUSG00000052631.16_3	chr6	-	1311	14	ISM	ENSMUSG00000052631.16	ENSMUST00000234615.2	1381	16	530	6	-527	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAATTCTCTCTTAATAC	NA	NA	NA	NA	NA	NA	NA	NA	72498160	72490640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_72491025_72492208_72492368_72492524_72492609_72492903_72492963_72493371_72493397_72493524_72493556_72494089_72494169_72494532_72494585_72494920_72494944_72495893_72495952_72496743_72496866_72497437_72497568_72497663_72497735_72498126
ENSMUSG00000052632.17_0	chr12	+	5662	28	NIC	ENSMUSG00000052632.17	novel	5678	29	NA	NA	0	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGACATGGTTCATCTG	NA	NA	NA	NA	NA	NA	NA	NA	21161748	21320165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_+_21162171_21218204_21218278_21235098_21235245_21249544_21249620_21250880_21250931_21253960_21254091_21256303_21256390_21262809_21262886_21263148_21263227_21267975_21268080_21268188_21268259_21274305_21274394_21279239_21279289_21279374_21279542_21280823_21280958_21289555_21289651_21294686_21294877_21297288_21297375_21299302_21299419_21301139_21301208_21302741_21302856_21304215_21304469_21306475_21306611_21308010_21308177_21315131_21315182_21315463_21315535_21315888_21316012_21317718
ENSMUSG00000052656.13_0	chr6	+	3241	4	FSM	ENSMUSG00000052656.13	ENSMUST00000064637.11	3264	4	15	8	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGAAGGTTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71470892	71487857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485852
ENSMUSG00000052656.13_2	chr6	+	3421	4	FSM	ENSMUSG00000052656.13	ENSMUST00000114178.8	3431	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCAGAAGGTTGTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	71470895	71487857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71471873_71473814_71473955_71482717_71482834_71485669
ENSMUSG00000052675.12_0	chr7	+	3458	4	FSM	ENSMUSG00000052675.12	ENSMUST00000120006.8	3464	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCTGGCTGTGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23811738	23827371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23811862_23821658_23821786_23823343_23823440_23824259
ENSMUSG00000052676.17_0	chrX	-	3487	7	FSM	ENSMUSG00000052676.17	ENSMUST00000064659.6	3501	7	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTAAATATTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	133909951	133872130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133874776_133878396_133878497_133891312_133891379_133892883_133893059_133893145_133893248_133894287_133894395_133909659
ENSMUSG00000052681.9_0	chr10	-	2716	8	FSM	ENSMUSG00000052681.9	ENSMUST00000064667.9	2724	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGACGGTCGTACTCGTTA	NA	NA	NA	NA	NA	NA	NA	NA	117681932	117649775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052681.9_1	chr10	-	2060	8	FSM	ENSMUSG00000052681.9	ENST00000393436.9	2073	8	7	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATAGTTACTTGCCACTG	NA	NA	NA	NA	NA	NA	NA	NA	117681943	117650453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681724
ENSMUSG00000052681.9_13	chr10	-	703	7	FSM	ENSMUSG00000052681.9	ENST00000543697.5	725	7	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACGAGAGATTTTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	117681825	117651537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117656366_117656508_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052681.9_3	chr10	-	1021	7	FSM	ENSMUSG00000052681.9	ENST00000542145.5	1036	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGTATTATACAAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	117681827	117651224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117657494_117657552_117658705_117658775_117660498_117660580_117681735
ENSMUSG00000052681.9_5	chr10	-	938	6	FSM	ENSMUSG00000052681.9	ENST00000539091.5	959	6	8	13	8	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCATAATAAAAGAAAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	117681828	117651334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117660498_117660580_117681724
ENSMUSG00000052681.9_8	chr10	-	828	5	FSM	ENSMUSG00000052681.9	ENST00000543393.5	846	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCACCACTATTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	117681827	117651351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117651686_117653248_117653366_117654370_117654515_117656366_117656508_117681735
ENSMUSG00000052684.5_0	chr4	-	3171	1	FSM	ENSMUSG00000052684.5	ENSMUST00000107094.2	3189	1	7	11	7	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	1585	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGAATTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	94940452	94937281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_94937300_94940500
ENSMUSG00000052688.13_0	chr1	+	4482	6	FSM	ENSMUSG00000052688.13	ENSMUST00000064679.9	4498	6	8	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTACTAAGACCAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	131616440	131643169	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131616574_131624736_131624805_131625566_131625694_131626153_131626370_131633333_131633460_131639357
ENSMUSG00000052688.13_1	chr1	+	1661	5	FSM	ENSMUSG00000052688.13	ENSMUST00000064664.10	1672	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131616455	131640489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131616574_131624736_131624805_131625566_131625694_131626153_131626370_131639357
ENSMUSG00000052698.16_13	chr9	-	12029	57	ISM	ENSMUSG00000052698.16	ENSMUST00000215784.2	8330	59	79630	-3813	79407	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAACTTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67367267	67124377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197
ENSMUSG00000052698.16_2	chr9	-	12110	58	FSM	ENSMUSG00000052698.16	ENSMUST00000040025.14	12132	58	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAATGAACTTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	67466972	67124377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67466895
ENSMUSG00000052698.16_20	chr9	-	8279	58	FSM	ENSMUSG00000052698.16	ENSMUST00000039662.9	8052	58	-5	-222	-5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAACTCTGGAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	67446679	67128197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67446613
ENSMUSG00000052698.16_21	chr9	-	8323	59	FSM	ENSMUSG00000052698.16	ENSMUST00000215784.2	8330	59	0	7	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAACTCTGGAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	67446897	67128197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67237829_67237933_67239013_67239143_67241471_67241607_67245491_67245606_67247563_67247678_67249316_67249446_67251347_67251515_67253602_67253898_67255403_67255572_67261727_67261827_67262344_67262554_67263941_67264051_67268603_67268718_67269918_67270100_67273186_67273264_67274411_67274514_67277893_67278050_67283009_67283115_67284088_67284153_67293838_67293967_67295851_67295995_67299733_67299887_67300856_67300987_67302735_67302834_67304793_67304966_67367197_67367272_67446613_67446686_67446859
ENSMUSG00000052698.16_24	chr9	-	4993	33	FSM	ENSMUSG00000052698.16	ENSMUST00000215267.2	4999	33	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAACTCTGGAGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	67234945	67128197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_67128801_67131257_67131384_67134389_67134573_67134663_67134727_67136613_67136740_67147961_67148087_67149608_67149715_67157824_67157933_67163140_67163327_67165469_67165587_67165743_67165870_67169172_67169357_67170095_67170263_67174058_67174206_67179891_67180012_67182602_67182705_67185264_67185412_67193739_67193911_67197263_67197366_67201086_67201220_67202916_67203099_67203583_67203725_67209755_67209918_67212117_67212262_67213701_67213825_67216151_67216242_67219082_67219177_67225464_67225605_67226598_67226797_67229120_67229241_67230254_67230464_67232066_67232239_67234869
ENSMUSG00000052707.9_1	chr7	+	8341	25	FSM	ENSMUSG00000052707.9	ENST00000395799.8	8355	25	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAATATTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	122723380	122794507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779471_122779619_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ENSMUSG00000052707.9_9	chr7	+	8132	24	FSM	ENSMUSG00000052707.9	ENSMUST00000094053.7	8183	24	39	12	39	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAATATTTTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	122723442	122794507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_122723556_122723890_122723939_122742972_122743061_122751386_122751409_122761716_122762101_122768758_122771342_122772455_122772633_122773366_122773543_122774648_122774682_122776046_122776128_122776904_122776957_122778939_122779083_122779762_122779901_122780541_122780671_122781178_122781257_122781468_122781677_122783378_122783511_122785785_122785945_122786575_122786717_122788010_122788119_122789067_122789290_122790722_122790794_122791281_122791422_122791801
ENSMUSG00000052712.18_0	chr17	+	2796	9	FSM	ENSMUSG00000052712.18	ENSMUST00000064709.13	2812	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTTCCTCTACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	29487770	29521857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29487977_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_15	chr17	+	765	6	FSM	ENSMUSG00000052712.18	ENSMUST00000235050.2	773	6	0	8	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCATGGGTTGGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	29487926	29520495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29487977_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_17	chr17	+	1661	9	FSM	ENSMUSG00000052712.18	ENSMUST00000234256.2	1694	9	25	8	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTTTGCATGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	29488040	29520491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29488478_29496830_29496922_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052712.18_6	chr17	+	13843	8	FSM	ENSMUSG00000052712.18	ENSMUST00000234711.2	13859	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAATTCCAAAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29487807	29533032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29487977_29501033_29501242_29501651_29501866_29512980_29513136_29513248_29513389_29515533_29515664_29517615_29517740_29520329
ENSMUSG00000052713.10_0	chr18	-	3188	8	FSM	ENSMUSG00000052713.10	ENST00000613878.4	3197	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3813	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTTTAATAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	55121678	55021132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_55022154_55022885_55022968_55024821_55024976_55027522_55027696_55028291_55028710_55033284_55033373_55079624_55079881_55120682
ENSMUSG00000052727.7_0	chr13	-	11791	7	FSM	ENSMUSG00000052727.7	ENSMUST00000064762.6	11808	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACATCTTTGGCTTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99653038	99557960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99562470_99563726_99563966_99565719_99572210_99578141_99578283_99580721_99580805_99644615_99644718_99652811
ENSMUSG00000052727.7_8	chr13	-	2654	3	FSM	ENSMUSG00000052727.7	ENSMUST00000223725.2	2669	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTTAATAAAAATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	99584119	99576147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99578283_99580721_99580805_99583683
ENSMUSG00000052738.15_0	chr6	+	1504	9	FSM	ENSMUSG00000052738.15	ENSMUST00000064740.9	1519	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1933	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGGCTGTGAAGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	73225373	73253888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_73225737_73233153_73233258_73237457_73237575_73240790_73241004_73241212_73241271_73246297_73246382_73247953_73248106_73252183_73252373_73253664
ENSMUSG00000052748.15_1	chr1	-	3673	20	FSM	ENSMUSG00000052748.15	ENSMUST00000064771.12	3688	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTAGCATTTTGCTTTTCCG	NA	NA	NA	NA	NA	NA	NA	NA	151304197	151243455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_151244340_151246329_151246395_151248058_151248126_151255133_151255266_151260067_151260256_151264370_151264520_151267186_151267326_151270359_151270524_151272956_151273103_151276830_151276925_151278705_151278895_151279545_151279648_151281166_151281297_151283326_151283387_151286521_151287210_151288541_151288598_151295850_151295935_151297784_151297872_151299257_151299357_151304047
ENSMUSG00000052751.17_0	chr6	+	3128	3	FSM	ENSMUSG00000052751.17	ENSMUST00000118229.2	3138	3	3	7	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTAGTGGCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	48570827	48576009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48570987_48571724_48571911_48573226
ENSMUSG00000052751.17_1	chr6	+	2952	2	FSM	ENSMUSG00000052751.17	ENSMUST00000163452.7	2959	2	1	6	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTAGTGGCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	48570817	48576009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48570987_48573226
ENSMUSG00000052751.17_2	chr6	+	3037	3	FSM	ENSMUSG00000052751.17	ENSMUST00000135151.3	3057	3	14	6	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTAGTGGCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	48570847	48576009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48570987_48571795_48571911_48573226
ENSMUSG00000052751.17_3	chr6	+	3088	2	FSM	ENSMUSG00000052751.17	ENST00000479668.5	3104	2	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTAGTGGCTGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	48571732	48576009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48571930_48573118
ENSMUSG00000052752.16_0	chr17	-	2989	21	FSM	ENSMUSG00000052752.16	ENSMUST00000176652.8	3003	21	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGTCAGCATGTTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	24746903	24727540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731923_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24733686_24733804_24735478_24735571_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052752.16_10	chr17	-	2378	19	FSM	ENSMUSG00000052752.16	ENSMUST00000070777.13	2384	19	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	24738182	24727829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104
ENSMUSG00000052752.16_7	chr17	-	2493	20	FSM	ENSMUSG00000052752.16	ENSMUST00000176353.8	2503	20	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGGTTGTGGAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	24746816	24727829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24728333_24728505_24728626_24728709_24728842_24728929_24729050_24729222_24729346_24729429_24729547_24729632_24729673_24730288_24730372_24730545_24730674_24730749_24730799_24730986_24731061_24731142_24731361_24731929_24732059_24732166_24732351_24732872_24732907_24733098_24733192_24735478_24735574_24737715_24737774_24738104_24738221_24746739
ENSMUSG00000052760.17_0	chr1	-	1328	6	FSM	ENSMUSG00000052760.17	ENSMUST00000064788.14	1353	6	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATATTTGGCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85664333	85645417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_85646090_85646745_85646851_85650818_85650903_85652841_85653011_85654179_85654337_85664192
ENSMUSG00000052763.8_0	chr6	+	2781	5	FSM	ENSMUSG00000052763.8	ENSMUST00000009411.9	2801	5	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAAGCAAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	47897413	47909557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47897684_47903440_47903831_47903953_47904081_47905983_47906065_47907644
ENSMUSG00000052783.17_0	chr5	+	3204	6	FSM	ENSMUSG00000052783.17	ENSMUST00000074651.11	3234	6	24	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACACTGACAACTACAT	NA	NA	NA	NA	NA	NA	NA	NA	34817746	34858420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34818349_34826453_34826547_34831877_34831991_34833453_34833529_34852090_34852198_34856206
ENSMUSG00000052783.17_1	chr5	+	2387	16	FSM	ENSMUSG00000052783.17	ENSMUST00000001112.14	2408	16	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	34817736	34912640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34818349_34826453_34826547_34831877_34831991_34833453_34833529_34852090_34852198_34867476_34867570_34869041_34869106_34873532_34873674_34877044_34877236_34887348_34887387_34888824_34888915_34902506_34902716_34905522_34905661_34908898_34909037_34909479_34909612_34912487
ENSMUSG00000052794.14_0	chr8	+	2876	8	FSM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTGAGTCAGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	73197727	73214838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73197834_73198593_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ENSMUSG00000052794.14_1	chr8	+	2772	7	ISM	ENSMUSG00000052794.14	ENSMUST00000064853.13	2887	8	868	7	816	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACTGAGTCAGGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	73198591	73214838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_73199315_73203293_73203586_73205202_73205277_73208957_73209412_73211816_73211913_73212446_73212614_73213872
ENSMUSG00000052798.14_0	chr10	-	3101	28	FSM	ENSMUSG00000052798.14	ENSMUST00000064848.7	3114	28	10	3	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGAGAGTTTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	117628600	117586528	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117597927_117598041_117599635_117599787_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUSG00000052798.14_24	chr10	-	2604	26	NIC	ENSMUSG00000052798.14	novel	3114	28	NA	NA	-1	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	4424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATAACTCACCATTCTC	NA	NA	NA	NA	NA	NA	NA	NA	117628611	117586772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_117586873_117587224_117587393_117593171_117593286_117593800_117593927_117595076_117595238_117597149_117597253_117600221_117600261_117601815_117601935_117602238_117602309_117606092_117606142_117606280_117606427_117607238_117607299_117608959_117609037_117609180_117609272_117610360_117610475_117612115_117612195_117613033_117613123_117613497_117613570_117616582_117616632_117617225_117617354_117617861_117617966_117620899_117621045_117623697_117623817_117625878_117625966_117626371_117626464_117628508
ENSMUSG00000052812.6_0	chr12	+	7994	30	NNC	ENSMUSG00000052812.6	novel	8035	31	NA	NA	29	-13	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAGAAGAACATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	4967432	5097381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_4967922_4987386_4987539_4989655_4989706_4990091_4990246_4991971_4992075_4993154_4993264_4994905_4995023_5000518_5000595_5002607_5002707_5004545_5004658_5007499_5007616_5008056_5008232_5011217_5011307_5015840_5016001_5019351_5019443_5023967_5024265_5032432_5032462_5033107_5033225_5035693_5035725_5040887_5041059_5056605_5056792_5060252_5060389_5063802_5064000_5067982_5068143_5074581_5074705_5077042_5077181_5081492_5082177_5084032_5084161_5084467_5084597_5094005
ENSMUSG00000052833.10_0	chr7	-	1861	9	FSM	ENSMUSG00000052833.10	ENSMUST00000094815.5	1875	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTTGTCTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	16121699	16060977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16061855_16064537_16064608_16070618_16070764_16092960_16093067_16100731_16100832_16102433_16102577_16104211_16104386_16112289_16112402_16121565
ENSMUSG00000052837.8_0	chr8	-	1794	1	FSM	ENSMUSG00000052837.8	ENSMUST00000064922.7	1809	1	10	5	10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTTCTGTGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85705337	85703543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85703500_85705300
ENSMUSG00000052852.9_0	chr6	+	3895	7	FSM	ENSMUSG00000052852.9	ENSMUST00000121469.2	3924	7	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATAGTGTAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	71684566	71787687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71684986_71733347_71733421_71738348_71738426_71750171_71750293_71757705_71757820_71772130_71772309_71784774
ENSMUSG00000052906.8_0	chr8	-	2786	8	FSM	ENSMUSG00000052906.8	ENSMUST00000095349.6	2808	8	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTGAAGTGGAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	34131983	34109623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34111729_34113189_34113265_34116351_34116394_34119264_34119403_34123529_34123656_34125316_34125388_34128507_34128631_34131877
ENSMUSG00000052911.10_0	chr9	+	5609	33	FSM	ENSMUSG00000052911.10	ENSMUST00000065014.10	5629	33	13	7	13	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTCCTCTGTGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	108357068	108367722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108357174_108357256_108357343_108357476_108357650_108357736_108357873_108357954_108358029_108358432_108358622_108358702_108358767_108359006_108359210_108359299_108359421_108359706_108359896_108360079_108360260_108360369_108360483_108360728_108360809_108360886_108361020_108361209_108361369_108361444_108361573_108362385_108362513_108362696_108362890_108362965_108363110_108363313_108363546_108363620_108363785_108363862_108364088_108364174_108364393_108364491_108364589_108364674_108365048_108365145_108365331_108365403_108365646_108365724_108366074_108366365_108366574_108366651_108366794_108366975_108367153_108367244_108367405_108367482
ENSMUSG00000052914.5_0	chr4	-	3584	9	FSM	ENSMUSG00000052914.5	ENSMUST00000030303.6	3605	9	20	1	20	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCTGGACCTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	96441878	96404375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_96406443_96411939_96412079_96414075_96414264_96417621_96417761_96419868_96420046_96423682_96423844_96424232_96424383_96433935_96434099_96441478
ENSMUSG00000052915.15_0	chr11	+	4564	9	FSM	ENSMUSG00000052915.15	ENSMUST00000037915.9	4593	9	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTGAACTTTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	98686363	98698678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052915.15_4	chr11	+	1384	10	FSM	ENSMUSG00000052915.15	ENST00000579565.5	1399	10	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGTGCCCTCATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98686668	98696333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98686805_98687334_98687431_98689965_98690190_98690825_98691209_98693093_98693142_98693607_98693673_98694728_98694797_98695127_98695253_98695672_98695746_98696167
ENSMUSG00000052917.16_0	chr16	+	4785	23	FSM	ENSMUSG00000052917.16	ENSMUST00000089360.10	4802	23	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGAAGGACTGCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	55895783	56010369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55959347_55959464_55971636_55971822_55973737_55974072_55975586_55975739_55978830_55978978_55982737_55982772_55986195_55986376_55990057_55990321_55992112_55992247_55993519_55993637_55996159_55996283_55999319_55999413_55999860_55999986_56000888_56000942_56004509_56004554_56005123_56005193_56006421_56006573_56008597
ENSMUSG00000052917.16_5	chr16	+	1121	7	FSM	ENSMUSG00000052917.16	ENSMUST00000049128.11	1130	7	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGTCACTCTAATGACA	NA	NA	NA	NA	NA	NA	NA	NA	55895827	55946894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55895942_55902718_55902772_55909746_55909828_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ENSMUSG00000052917.16_6	chr16	+	898	6	FSM	ENSMUSG00000052917.16	ENSMUST00000201011.2	914	6	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACTCCTTGCCTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	55895855	55946780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55895942_55902718_55902772_55917702_55917795_55931968_55932167_55944141_55944334_55946503
ENSMUSG00000052926.17_0	chr8	-	2958	10	FSM	ENSMUSG00000052926.17	ENSMUST00000109736.9	2981	10	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAAAGCCACAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	85696357	85683249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692917_85694291_85694498_85695914
ENSMUSG00000052926.17_1	chr8	-	2022	8	FSM	ENSMUSG00000052926.17	ENSMUST00000109738.10	2044	8	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATCAAAGCCACAAACTAT	NA	NA	NA	NA	NA	NA	NA	NA	85692629	85683249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_16	chr8	-	1120	7	FSM	ENSMUSG00000052926.17	ENSMUST00000128972.9	1141	7	16	5	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	85692677	85684300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052926.17_17	chr8	-	1517	11	FSM	ENSMUSG00000052926.17	ENSMUST00000147812.8	1532	11	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	85696059	85684300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85684494_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488_85692623_85692714_85692917_85694291_85694498_85695914
ENSMUSG00000052926.17_18	chr8	-	996	8	FSM	ENSMUSG00000052926.17	ENSMUST00000065049.15	1006	8	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGTGGACCGAGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	85692665	85684300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85684483_85684594_85684719_85686404_85686493_85686595_85686734_85691759_85691848_85691945_85692073_85692199_85692272_85692488
ENSMUSG00000052928.10_0	chr18	-	6013	12	FSM	ENSMUSG00000052928.10	ENSMUST00000165559.3	6031	12	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACGATACCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75830617	75564304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_75568481_75570241_75570296_75604935_75605092_75652809_75653179_75654447_75654941_75698074_75698152_75738698_75738775_75743739_75743845_75744776_75744851_75757299_75757372_75770203_75770410_75830462
ENSMUSG00000052934.15_0	chr8	-	4346	9	FSM	ENSMUSG00000052934.15	ENSMUST00000059018.14	4358	9	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGACTTGTTTCTCGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	122305533	122276178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_122279185_122280843_122281191_122281944_122282099_122282980_122283091_122285758_122285834_122286661_122286830_122287124_122287202_122293013_122293086_122305196
ENSMUSG00000052949.15_0	chr11	-	4523	18	FSM	ENSMUSG00000052949.15	ENSMUST00000106398.9	4553	18	20	10	20	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGAATTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116303810	116227188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ENSMUSG00000052949.15_1	chr11	-	4605	19	FSM	ENSMUSG00000052949.15	ENSMUST00000100202.10	4619	19	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACGTGAATTCGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	116303826	116227188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116229657_116235020_116235132_116236732_116236782_116237858_116237925_116238167_116238338_116238681_116238794_116240159_116240269_116240785_116241025_116245190_116245304_116245461_116245622_116246270_116246343_116249494_116249543_116249761_116249806_116250068_116250136_116250638_116250757_116251079_116251227_116253110_116253200_116287014_116287134_116303522
ENSMUSG00000052957.9_1	chr13	-	2943	1	FSM	ENSMUSG00000052957.9	ENSMUST00000065086.6	2961	1	10	8	10	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	5090	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTGTCTATGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	60325169	60322226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_60322200_60325200
ENSMUSG00000052962.4_0	chr6	-	3703	4	FSM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAATGGATTTCTAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	71800786	71789990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71793272_71794588_71794734_71795652_71795843_71800699
ENSMUSG00000052962.4_1	chr6	-	3621	3	ISM	ENSMUSG00000052962.4	ENSMUST00000065103.4	3721	4	4950	7	4950	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGATTTCTAGTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71795844	71789987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_71793272_71794588_71794734_71795652
ENSMUSG00000052997.16_0	chr7	-	2568	17	FSM	ENSMUSG00000052997.16	ENSMUST00000102746.11	2579	17	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCCCTAGTGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	33867989	33840112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867797
ENSMUSG00000052997.16_15	chr7	-	2481	17	FSM	ENSMUSG00000052997.16	ENST00000439527.6	2496	17	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTCATCTGCCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	33867388	33840126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33840892_33842162_33842300_33843914_33844021_33845629_33845727_33846944_33847101_33850212_33850326_33850419_33850514_33853908_33854070_33855309_33855410_33856667_33856790_33857403_33857472_33858242_33858365_33860961_33861063_33862578_33862644_33863809_33863881_33864826_33864911_33867269
ENSMUSG00000053007.10_0	chr6	+	7468	7	FSM	ENSMUSG00000053007.10	ENSMUST00000205120.3	7482	7	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAAAGAATGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	53550286	53677340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_53550424_53581446_53581574_53587406_53587518_53657920_53658245_53662277_53662506_53669883_53669993_53670908
ENSMUSG00000053012.18_0	chr6	+	1676	3	FSM	ENSMUSG00000053012.18	ENSMUST00000204436.3	1687	3	10	1	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTGTGTCAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	71248670	71262302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71248825_71259134_71259302_71260947
ENSMUSG00000053024.15_0	chr1	-	3545	23	FSM	ENSMUSG00000053024.15	ENST00000640428.1	3561	23	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTGGGTCCCCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	132470610	132442241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132442533_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470460
ENSMUSG00000053024.15_1	chr1	-	3852	23	ISM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	9284	3	9069	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTGGGTCCCCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	132461554	132442241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_132442533_132442917_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394
ENSMUSG00000053024.15_3	chr1	-	3922	24	FSM	ENSMUSG00000053024.15	ENST00000638378.1	3928	24	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCTTGGGTCCCCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	132470835	132442241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132442533_132442917_132443376_132443758_132443928_132444261_132444375_132444638_132444826_132446034_132446148_132446399_132446635_132446906_132446978_132448876_132449027_132449458_132449618_132450070_132450192_132450672_132450849_132451095_132451224_132451330_132451482_132453044_132453175_132453555_132453693_132454025_132454202_132455432_132455533_132455813_132456024_132456349_132456446_132456647_132456824_132456924_132457070_132461394_132461556_132470766
ENSMUSG00000053025.14_0	chr7	-	3898	13	FSM	ENSMUSG00000053025.14	ENSMUST00000206344.2	3910	13	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGATACATTCGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	74869764	74766089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_74767527_74769672_74769833_74773761_74773963_74775318_74775453_74786045_74786211_74789823_74789913_74790726_74790838_74797384_74797475_74798702_74798837_74806354_74806507_74807016_74807198_74855837_74856671_74869553
ENSMUSG00000053040.14_0	chr9	-	5183	6	FSM	ENSMUSG00000053040.14	ENSMUST00000169282.8	5205	6	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATTAACAATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	66742002	66722291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66726744_66729515_66729644_66735018_66735142_66735954_66736029_66740440_66740612_66741767
ENSMUSG00000053044.9_0	chr6	+	1460	6	FSM	ENSMUSG00000053044.9	ENSMUST00000065248.9	1483	6	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAACAAACAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	71299777	71314461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71299884_71302969_71303333_71306680_71306777_71309419_71309510_71311073_71311111_71313693
ENSMUSG00000053046.17_0	chr7	+	3152	19	FSM	ENSMUSG00000053046.17	ENST00000531197.5	3170	19	8	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTTAAAAGAATTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	141503482	141556971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141503917_141535273_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141556211
ENSMUSG00000053046.17_16	chr7	+	3103	18	FSM	ENSMUSG00000053046.17	ENST00000382179.5	3121	18	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAACTTTCTTTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	141535285	141557003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141535369_141536717_141536804_141538130_141538272_141538585_141538703_141539397_141539516_141539622_141539770_141541158_141541191_141541487_141541653_141541850_141541949_141542022_141542174_141545976_141546038_141546848_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141554578_141554627_141555799
ENSMUSG00000053046.17_22	chr7	+	1610	8	FSM	ENSMUSG00000053046.17	ENST00000544817.5	1625	8	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACATATACATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	141546927	141557105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141547057_141547451_141547501_141550625_141550750_141552114_141552296_141552369_141552460_141552656_141552752_141554578_141554627_141556211
ENSMUSG00000053049.4_0	chr7	-	1933	4	FSM	ENSMUSG00000053049.4	ENSMUST00000155101.2	1935	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAGCCAAGATGAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	96450754	96440639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_96442035_96444724_96445005_96448984_96449065_96450576
ENSMUSG00000053062.17_0	chr16	+	4354	10	FSM	ENSMUSG00000053062.17	ENSMUST00000114195.8	4370	10	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAACTCATTTATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	84571020	84622810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231_84606385_84609786_84609987_84612056_84612157_84613153_84613262_84615647_84615664_84618147_84618191_84619674
ENSMUSG00000053062.17_6	chr16	+	1973	4	FSM	ENSMUSG00000053062.17	ENSMUST00000098407.3	1998	4	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTTAAAAATAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	84571282	84607868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_84571442_84598457_84598527_84603722_84603831_84606231
ENSMUSG00000053070.6_0	chr9	-	401	4	FSM	ENSMUSG00000053070.6	ENST00000534360.1	411	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTCACTGTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	8042738	8025960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_8026136_8037460_8037537_8042409_8042492_8042670
ENSMUSG00000053070.6_1	chr9	-	331	3	ISM	ENSMUSG00000053070.6	ENST00000534360.1	411	4	253	6	253	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTCTCACTGTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	8042489	8025960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_8026136_8037460_8037537_8042409
ENSMUSG00000053091.17_0	chr7	+	2715	8	FSM	ENSMUSG00000053091.17	ENSMUST00000121777.9	2729	8	2	12	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGCAAACATGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66339643	66364483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358492_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUSG00000053091.17_1	chr7	+	2636	8	FSM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGCAAACATGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66339707	66364483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_66339772_66345923_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUSG00000053091.17_5	chr7	+	2570	7	ISM	ENSMUSG00000053091.17	ENSMUST00000077967.13	2647	8	6220	9	6220	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTGCAAACATGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66345925	66364483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_66346055_66357787_66358302_66358386_66358477_66359041_66359184_66359906_66360495_66361620_66361793_66363548
ENSMUSG00000053093.17_0	chr14	-	5909	37	FSM	ENSMUSG00000053093.17	ENST00000355349.4	5926	37	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAAAATCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55230332	55208150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55208268_55208833_55208969_55209081_55209178_55210144_55210421_55210527_55210654_55210758_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761_55225933_55226231_55226382_55226500_55226620_55226711_55226851_55227434_55227539_55227761_55227861_55228198_55228263_55228372_55228466_55228548_55228677_55229285_55229452_55229696_55229841_55230129
ENSMUSG00000053093.17_4	chr14	-	6086	41	FSM	ENSMUSG00000053093.17	ENSMUST00000102803.11	6135	41	39	10	39	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCAAAATCCTGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55232044	55208150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55208268_55208833_55208969_55209081_55209178_55210144_55210421_55210527_55210654_55210758_55210963_55211214_55211524_55212098_55212224_55212368_55212535_55212690_55212875_55213335_55213533_55216039_55216159_55216323_55216451_55216629_55217020_55217777_55217869_55219622_55219769_55220698_55220876_55220999_55221243_55222007_55222264_55222510_55222648_55222917_55223042_55223181_55223300_55223916_55224005_55224325_55224394_55224677_55224988_55225761_55225933_55226231_55226382_55226500_55226620_55226711_55226851_55227434_55227539_55227761_55227861_55228198_55228263_55228372_55228466_55228548_55228658_55229172_55229201_55229294_55229452_55229696_55229841_55230129_55230339_55230760_55230817_55231044_55231083_55231967
ENSMUSG00000053094.16_0	chr5	+	3604	7	FSM	ENSMUSG00000053094.16	ENSMUST00000065329.13	3607	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGTATCCCCGGCCATG	NA	NA	NA	NA	NA	NA	NA	NA	130248587	130272606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130248761_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUSG00000053094.16_2	chr5	+	3554	7	FSM	ENSMUSG00000053094.16	ENSMUST00000111298.6	3570	7	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTACTTGGTTTGCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	130251185	130272501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130251414_130258289_130258468_130260595_130260882_130265643_130265795_130267087_130267272_130269188_130269333_130270118
ENSMUSG00000053110.14_0	chr9	-	3883	8	FSM	ENSMUSG00000053110.14	ENST00000537274.5	3900	8	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGTCTCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	8004306	7931960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_2	chr9	-	3929	9	FSM	ENSMUSG00000053110.14	ENST00000615667.4	3948	9	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTGAGTCTCTCTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	8004304	7931960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7950492_7950541_7952941_7953136_7962289_7962404_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_55	chr9	-	1556	7	FSM	ENSMUSG00000053110.14	ENST00000526343.5	1574	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACACAGACTGGGAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	8004310	7934165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952953_7953136_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053110.14_61	chr9	-	1231	7	FSM	ENSMUSG00000053110.14	ENST00000629586.2	1243	7	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGAGCTGCAGGGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	8004309	7934501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7934734_7936515_7936629_7938408_7938540_7952941_7953136_7973796_7973913_8001457_8001709_8004115
ENSMUSG00000053113.4_0	chr11	-	2532	2	FSM	ENSMUSG00000053113.4	ENSMUST00000054002.4	2552	2	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAAAAAAAAAAGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	117860006	117856918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117859145_117859700
ENSMUSG00000053119.12_0	chr6	+	2639	6	FSM	ENSMUSG00000053119.12	ENSMUST00000059462.12	2654	6	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTTTGTATATTATGC	NA	NA	NA	NA	NA	NA	NA	NA	71520790	71558558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71521018_71529382_71529444_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000053119.12_1	chr6	+	1104	5	FSM	ENSMUSG00000053119.12	ENST00000409225.2	1117	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATTGTAAATGTCACAT	NA	NA	NA	NA	NA	NA	NA	NA	71520861	71557155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71521018_71537880_71538061_71551098_71551221_71554714_71554830_71556624
ENSMUSG00000053128.16_0	chr9	-	2704	1	FSM	ENSMUSG00000053128.16	ENSMUST00000056328.6	2724	1	12	8	12	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTAAGTGTGGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	44024789	44022085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44022100_44024800
ENSMUSG00000053128.16_1	chr9	-	2227	2	FSM	ENSMUSG00000053128.16	ENSMUST00000216511.2	2257	2	24	6	24	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCTAAGTGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	44024746	44022087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44023981_44024412
ENSMUSG00000053134.14_0	chr5	-	2680	5	FSM	ENSMUSG00000053134.14	ENSMUST00000065388.11	2693	5	7	6	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGAGTTATTCCAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	31684110	31671913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680606_31683958
ENSMUSG00000053134.14_1	chr5	-	2532	5	FSM	ENSMUSG00000053134.14	ENSMUST00000201769.4	2548	5	8	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTCATCTGAGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	31684072	31671921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680504_31683958
ENSMUSG00000053134.14_2	chr5	-	2083	6	FSM	ENSMUSG00000053134.14	ENST00000406540.5	2100	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTAACTGCAGAGCGC	NA	NA	NA	NA	NA	NA	NA	NA	31682566	31673016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31673271_31675610_31675849_31677426_31677752_31679997_31680901_31681075_31681182_31682309
ENSMUSG00000053137.8_0	chr15	-	2450	12	FSM	ENSMUSG00000053137.8	ENSMUST00000088823.5	2461	12	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGCTCTGGATCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89033820	89026689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89028021_89028343_89028518_89028595_89028675_89029298_89029379_89029577_89029650_89030004_89030120_89030205_89030254_89030341_89030372_89030474_89030587_89030673_89030733_89030911_89031042_89033600
ENSMUSG00000053141.17_0	chr2	-	5096	25	FSM	ENSMUSG00000053141.17	ENST00000373198.8	5112	25	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATTGTAGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	161769692	161369563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_161371490_161372356_161372493_161375400_161375565_161376388_161376515_161389203_161389336_161393666_161393841_161395649_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449369_161498061_161498211_161528988_161529019_161539893_161540030_161560274_161560332_161574798_161574836_161608143_161608418_161652469_161652573_161653854_161654057_161743367_161743478_161769401
ENSMUSG00000053141.17_1	chr2	-	5035	24	FSM	ENSMUSG00000053141.17	ENST00000373190.5	5052	24	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTATTGTAGAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	161769691	161369563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_161371490_161372356_161372493_161375400_161375565_161376388_161376515_161389203_161389336_161393666_161393841_161395649_161395800_161397333_161397470_161400739_161400895_161402088_161402206_161406546_161406645_161408044_161408082_161417645_161417723_161429466_161429555_161449177_161449366_161498061_161498211_161528988_161529019_161539893_161540030_161574798_161574836_161608143_161608418_161652469_161652573_161653854_161654057_161743367_161743478_161769401
ENSMUSG00000053153.15_1	chr1	+	849	9	FSM	ENSMUSG00000053153.15	ENST00000272898.11	861	9	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAGAAGTTGGATATAA	NA	NA	NA	NA	NA	NA	NA	NA	69866189	69935695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_69866281_69882127_69882175_69883437_69883534_69892481_69892601_69897631_69897770_69909422_69909531_69912292_69912411_69926650_69926718_69935630
ENSMUSG00000053153.15_6	chr1	+	758	8	ISM	ENSMUSG00000053153.15	ENST00000272898.11	861	9	15944	6	15944	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGGAAGAAGTTGGATATAA	NA	NA	NA	NA	NA	NA	NA	NA	69882127	69935695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_69882175_69883437_69883534_69892481_69892601_69897631_69897770_69909422_69909531_69912292_69912411_69926650_69926718_69935630
ENSMUSG00000053158.11_0	chr7	-	2248	17	FSM	ENSMUSG00000053158.11	ENST00000444422.2	2260	17	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCGGAGGCGAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80037072	80027680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036558_80036733_80036869
ENSMUSG00000053158.11_1	chr7	-	2186	17	FSM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCGGAGGCGAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80037677	80027680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869_80037092_80037584
ENSMUSG00000053158.11_2	chr7	-	2283	17	FSM	ENSMUSG00000053158.11	ENST00000394300.7	2296	17	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCGGAGGCGAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80037071	80027680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80031348_80031559_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053158.11_5	chr7	-	2095	16	ISM	ENSMUSG00000053158.11	ENST00000414248.6	2195	17	591	2	-11	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCGGAGGCGAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80037093	80027680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_80027823_80028289_80028413_80028525_80028684_80029358_80029483_80029565_80029661_80029956_80030076_80030586_80030641_80030912_80031036_80032060_80032145_80032268_80032456_80032558_80032682_80032817_80032938_80033016_80033155_80033581_80033766_80033938_80034036_80036869
ENSMUSG00000053178.6_0	chr5	+	1362	2	FSM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTACATTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4242366	4247645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_4242419_4246335
ENSMUSG00000053178.6_1	chr5	+	1307	1	ISM	ENSMUSG00000053178.6	ENSMUST00000177258.2	1368	2	3972	6	3972	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTACATTTATTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	4246338	4247645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_4246300_4247600
ENSMUSG00000053192.10_0	chr3	-	1897	2	FSM	ENSMUSG00000053192.10	ENSMUST00000065482.6	1923	2	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCCTAAGTCTGGGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	95135971	95126454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95127775_95135394
ENSMUSG00000053205.10_0	chr14	+	12962	11	FSM	ENSMUSG00000053205.10	ENSMUST00000226873.2	12974	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATAGTTTTCTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	45588554	45622957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45588987_45592402_45592436_45594169_45594224_45596715_45596814_45604055_45604117_45605138_45605176_45605763_45605804_45605877_45605929_45608475_45608549_45609841_45609936_45610968
ENSMUSG00000053216.16_0	chr13	-	2349	8	FSM	ENSMUSG00000053216.16	ENSMUST00000110433.10	2370	8	15	6	-2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCATGTCTGTGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	23673012	23661851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23663012_23664619_23664647_23664736_23664758_23665941_23666116_23666888_23667171_23670298_23670647_23672002_23672133_23672805
ENSMUSG00000053216.16_1	chr13	-	1934	4	FSM	ENSMUSG00000053216.16	ENST00000429381.5	1951	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGCTGCTCTGGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	23670636	23662178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23663271_23665893_23666116_23666888_23667171_23670298
ENSMUSG00000053219.16_0	chr10	+	1558	9	FSM	ENSMUSG00000053219.16	ENSMUST00000181645.8	1579	9	13	8	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22034480	22059808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22034618_22047902_22048001_22049079_22049150_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053219.16_3	chr10	+	1269	7	FSM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22049419	22059808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22049436_22049774_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053219.16_4	chr10	+	1225	6	ISM	ENSMUSG00000053219.16	ENSMUST00000065527.11	1274	7	383	5	-15	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22049802	22059808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_22049866_22050191_22050310_22056516_22056772_22057023_22057288_22057844_22058015_22059453
ENSMUSG00000053226.8_0	chr8	-	1575	2	FSM	ENSMUSG00000053226.8	ENSMUST00000065539.6	1585	2	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCAGCTGTGCGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	85549449	85542039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85543163_85548997
ENSMUSG00000053253.17_0	chr14	+	2513	8	FSM	ENSMUSG00000053253.17	ENSMUST00000181969.8	2532	8	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATAACCTCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	105496017	105546723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_105496438_105525050_105525214_105529665_105529800_105532232_105532327_105535436_105535562_105539732_105539800_105542164_105542271_105545319
ENSMUSG00000053286.12_1	chr1	+	2726	15	FSM	ENSMUSG00000053286.12	ENSMUST00000065625.12	2749	15	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGTTTCTGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	151304308	151333905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151304854_151309544_151309656_151311478_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053286.12_7	chr1	+	2616	15	FSM	ENSMUSG00000053286.12	ENST00000367506.10	2638	15	13	9	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAAGTTTCTGACTGGG	NA	NA	NA	NA	NA	NA	NA	NA	151304411	151333905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151304854_151309544_151309656_151311485_151311593_151315266_151315332_151316556_151316687_151318337_151318462_151318997_151319078_151324004_151324249_151325650_151325864_151327798_151327990_151328827_151328907_151329635_151329803_151330728_151330792_151333213_151333341_151333432
ENSMUSG00000053289.9_0	chr9	-	3111	18	FSM	ENSMUSG00000053289.9	ENSMUST00000065630.8	3128	18	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATACTATTGTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	53159342	53009940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_53010563_53028452_53028590_53060802_53060860_53068470_53068633_53071197_53071318_53115358_53115831_53118765_53118855_53120988_53121077_53124535_53124638_53134959_53135045_53136772_53136936_53140424_53140552_53145127_53145318_53146562_53146684_53147699_53147859_53149347_53149479_53151776_53151838_53159117
ENSMUSG00000053291.16_0	chr7	-	1178	8	FSM	ENSMUSG00000053291.16	ENSMUST00000093040.13	1192	8	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGGCCTCTGTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	26878307	26867848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875319_26875582_26875664_26878151
ENSMUSG00000053293.10_0	chr5	-	5567	13	FSM	ENSMUSG00000053293.10	ENSMUST00000111171.6	5580	13	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGTGAGTTTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	135423391	135404998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_135407029_135407488_135407612_135409773_135411391_135411924_135412099_135412480_135412584_135412692_135412818_135412946_135413021_135413706_135413799_135415677_135415850_135417490_135417572_135420475_135420635_135421163_135421380_135422790
ENSMUSG00000053310.12_0	chr9	-	1030	2	FSM	ENSMUSG00000053310.12	ENST00000284292.11	1083	2	47	6	47	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTACAGAGGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	37457423	37455794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37456645_37457243
ENSMUSG00000053310.12_1	chr9	-	1075	2	FSM	ENSMUSG00000053310.12	ENST00000412681.2	1090	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTACAGAGGGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	37457460	37455794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37456653_37457243
ENSMUSG00000053317.12_0	chr4	+	549	4	FSM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGAGACTGGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47474663	47483233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_47474754_47474911_47475010_47480130_47480233_47482974
ENSMUSG00000053317.12_3	chr4	+	460	3	ISM	ENSMUSG00000053317.12	ENSMUST00000065678.6	564	4	253	9	253	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGAGACTGGTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	47474910	47483233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_47475010_47480130_47480233_47482974
ENSMUSG00000053318.8_0	chr1	-	1639	5	FSM	ENSMUSG00000053318.8	ENSMUST00000065679.8	1659	5	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAATTCTTGTGTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	172418120	172409329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_172410073_172411718_172411827_172411906_172412213_172415475_172415803_172417965
ENSMUSG00000053329.8_0	chr10	-	1370	7	FSM	ENSMUSG00000053329.8	ENSMUST00000001242.9	1378	7	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGTCTCAGGCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78005609	77997900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77998553_77999230_77999388_78000671_78000765_78003228_78003349_78004642_78004757_78005206_78005260_78005428
ENSMUSG00000053332.14_0	chr1	+	651	10	FSM	ENSMUSG00000053332.14	ENSMUST00000159119.8	665	10	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAACATGAACTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	160862503	160866096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_1	chr1	+	541	11	FSM	ENSMUSG00000053332.14	ENSMUST00000159706.8	557	11	8	8	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGAACTGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160862644	160866099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_4	chr1	+	494	12	FSM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	0	8	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGAACTGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160862732	160866099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160862765_160863321_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053332.14_7	chr1	+	455	11	ISM	ENSMUSG00000053332.14	ENSMUST00000162558.8	502	12	596	8	593	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGAACTGTGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	160863328	160866099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_160863375_160863552_160863585_160863777_160863815_160864118_160864150_160864389_160864423_160864693_160864735_160864857_160864886_160865074_160865118_160865564_160865608_160865794_160865843_160866026
ENSMUSG00000053333.16_0	chr1	+	3149	22	FSM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	0	5	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGTCTGTGTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	86631540	86977812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUSG00000053333.16_12	chr1	+	3091	21	ISM	ENSMUSG00000053333.16	ENSMUST00000168237.8	3154	22	40867	5	40843	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCTGTCTGTGTAGATG	NA	NA	NA	NA	NA	NA	NA	NA	86672407	86977812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86719137_86719180_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUSG00000053333.16_13	chr1	+	3040	20	ISM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	40845	9	40845	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGAATTGCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86672409	86977805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUSG00000053333.16_7	chr1	+	3076	21	FSM	ENSMUSG00000053333.16	ENSMUST00000065694.8	3085	21	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGAATTGCTGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	86631564	86977805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86631594_86672402_86672551_86673062_86673221_86681948_86682003_86688009_86688112_86748943_86749173_86782081_86782183_86784848_86785097_86806124_86806299_86858475_86858556_86887464_86887578_86901121_86901230_86917813_86918048_86948759_86948840_86971738_86971923_86972551_86972639_86974758_86974907_86975169_86975301_86975409_86975515_86976554_86976657_86977344
ENSMUSG00000053334.7_0	chr5	+	3120	3	FSM	ENSMUSG00000053334.7	ENSMUST00000065698.7	3133	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTACAAACATTGCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	113873871	113878656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_113874111_113874881_113875234_113876127
ENSMUSG00000053347.16_0	chr17	+	2719	4	FSM	ENSMUSG00000053347.16	ENSMUST00000055349.15	2741	4	13	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCAACAAGTTGGACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22181545	22213338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_22181801_22207011_22207083_22209759_22209887_22211072
ENSMUSG00000053390.17_0	chr17	+	2945	4	FSM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTATGGTGATCGGT	NA	NA	NA	NA	NA	NA	NA	NA	33212170	33224426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33212233_33220597_33220725_33220931_33220993_33221731
ENSMUSG00000053390.17_1	chr17	+	2875	3	ISM	ENSMUSG00000053390.17	ENSMUST00000087666.11	2950	4	8435	5	8435	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTATGGTGATCGGT	NA	NA	NA	NA	NA	NA	NA	NA	33220605	33224426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_33220725_33220931_33220993_33221731
ENSMUSG00000053398.12_0	chr3	-	1877	12	FSM	ENSMUSG00000053398.12	ENSMUST00000065793.12	1893	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	7885	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCACATGGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	98247297	98220492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_98220774_98221483_98221722_98222380_98222512_98223721_98223855_98226935_98227089_98227961_98228111_98228528_98228662_98235362_98235462_98235604_98235660_98240550_98240617_98241822_98241975_98247010
ENSMUSG00000053411.17_0	chr15	-	2881	7	FSM	ENSMUSG00000053411.17	ENSMUST00000109616.9	2899	7	15	3	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79816838	79800010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79802252_79802477_79802678_79802953_79803027_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUSG00000053411.17_1	chr15	-	3388	6	FSM	ENSMUSG00000053411.17	ENSMUST00000089293.11	3388	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGACTTCTGTGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	79816840	79800010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79802678_79802953_79803306_79805572_79805640_79807672_79807739_79814786_79814831_79816648
ENSMUSG00000053436.16_0	chr17	+	3542	12	FSM	ENSMUSG00000053436.16	ENSMUST00000004990.14	3562	12	12	8	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTGGTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28910314	28967372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28959653_28959734_28960761_28960841_28963956_28964131_28965244
ENSMUSG00000053436.16_1	chr17	+	3586	13	FSM	ENSMUSG00000053436.16	ENSMUST00000114754.8	3592	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTGGTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28910315	28967372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28910830_28911729_28911775_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ENSMUSG00000053436.16_2	chr17	+	3522	12	FSM	ENSMUSG00000053436.16	ENSMUST00000062694.16	3548	12	19	7	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTGGTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28910334	28967372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28910830_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ENSMUSG00000053436.16_4	chr17	+	3142	12	FSM	ENSMUSG00000053436.16	ENSMUST00000114752.3	3148	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTTGGTTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	28911541	28967372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_28911657_28932747_28932878_28934356_28934416_28943717_28943830_28944466_28944497_28944770_28944819_28947330_28947446_28947877_28947950_28955984_28956065_28960761_28960841_28963956_28964131_28965244
ENSMUSG00000053453.10_1	chr14	+	923	8	FSM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	6	8	-3	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGATCTTTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	8508491	8520743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_8508579_8515106_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053453.10_3	chr14	+	485	6	FSM	ENSMUSG00000053453.10	ENST00000469584.5	506	6	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGTGAAAAAACATTCC	NA	NA	NA	NA	NA	NA	NA	NA	8508502	8519630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_8508579_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561
ENSMUSG00000053453.10_5	chr14	+	837	7	ISM	ENSMUSG00000053453.10	ENSMUST00000065865.10	937	8	6620	8	6611	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGGATCTTTGTGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	8515105	8520743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_8515225_8516224_8516353_8516600_8516688_8518499_8518558_8519397_8519465_8519561_8519632_8520435
ENSMUSG00000053460.9_0	chr6	+	2916	15	FSM	ENSMUSG00000053460.9	ENSMUST00000065906.9	2929	15	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCACTACCTGGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	72391296	72407688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72391433_72391654_72391826_72394837_72394997_72395283_72395450_72399398_72399478_72400916_72401024_72402768_72402933_72403343_72403610_72404024_72404157_72404880_72405033_72405440_72405611_72405779_72405911_72406115_72406264_72406426_72406623_72406949
ENSMUSG00000053469.15_0	chr15	+	3710	26	FSM	ENSMUSG00000053469.15	ENSMUST00000171045.9	3748	26	28	10	28	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAACAAAGCACTGATTA	NA	NA	NA	NA	NA	NA	NA	NA	66587765	66722560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66587884_66588976_66589093_66591498_66591608_66596938_66597131_66601364_66601533_66606398_66606465_66607071_66607147_66608098_66608237_66609261_66609439_66610947_66611060_66612552_66612633_66613334_66613479_66620579_66620646_66629719_66629855_66631266_66631432_66636113_66636337_66637967_66638062_66640384_66640545_66645127_66645331_66699111_66699277_66700247_66700416_66709790_66709973_66711133_66711242_66718904_66719040_66721289_66721478_66722337
ENSMUSG00000053470.14_0	chr6	-	4821	26	FSM	ENSMUSG00000053470.14	ENSMUST00000167220.4	4853	26	25	7	25	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTATTGAATTAGATAATCA	NA	NA	NA	NA	NA	NA	NA	NA	71609645	71565964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480
ENSMUSG00000053470.14_1	chr6	-	4797	27	FSM	ENSMUSG00000053470.14	ENSMUST00000065509.11	4816	27	8	11	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTATTGAATTAGATAAT	NA	NA	NA	NA	NA	NA	NA	NA	71609881	71565966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609480_71609564_71609821
ENSMUSG00000053470.14_6	chr6	-	4721	26	FSM	ENSMUSG00000053470.14	ENSMUST00000207023.2	4753	26	27	5	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGTCGCTGTTCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	71609947	71566025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71566700_71567421_71567557_71567641_71567819_71568838_71568979_71569056_71569177_71570858_71570990_71571506_71571601_71572465_71572638_71573639_71573877_71574200_71574374_71576300_71576497_71576997_71577126_71577475_71577572_71577706_71577860_71580917_71581133_71584385_71584591_71588488_71589001_71590815_71590980_71596941_71597031_71597121_71597195_71597427_71597553_71598328_71598432_71601576_71601688_71602742_71602899_71609039_71609256_71609821
ENSMUSG00000053477.19_13	chr18	+	2082	18	FSM	ENSMUSG00000053477.19	ENST00000566279.5	2108	18	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCTGAGTAGTTATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	69478878	69816261	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69478990_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_16	chr18	+	2582	20	FSM	ENSMUSG00000053477.19	ENST00000540999.5	2594	20	12	0	12	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAATATAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	69481353	69816509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69481540_69481601_69481703_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_2	chr18	+	8547	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114985.10	8577	20	17	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCCACAAGCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	69477576	69822137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69478097_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_35	chr18	+	1919	16	FSM	ENSMUSG00000053477.19	ENST00000675707.1	1934	16	0	15	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTATCAAAAAACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69632323	69816309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69632368_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_46	chr18	+	1870	15	FSM	ENSMUSG00000053477.19	ENSMUST00000202937.4	2103	15	194	39	194	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTATCAAAAAACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69653040	69816309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_5	chr18	+	2965	20	FSM	ENSMUSG00000053477.19	ENSMUST00000202116.4	2986	20	15	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGCAATCCTCCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	69478804	69816455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69479437_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_56	chr18	+	2425	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114978.9	2437	13	6	6	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATATAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	69726064	69816510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_6	chr18	+	3686	20	FSM	ENSMUSG00000053477.19	ENSMUST00000114982.8	3694	20	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAAAAAAAAAAAAAATGCC	NA	NA	NA	NA	NA	NA	NA	NA	69478799	69817597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_60	chr18	+	3058	13	FSM	ENSMUSG00000053477.19	ENSMUST00000114977.5	3070	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	69726508	69817599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69726656_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811189_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053477.19_7	chr18	+	7125	20	FSM	ENSMUSG00000053477.19	ENSMUST00000078486.13	7147	20	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGCCCTCTTCTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	69478807	69821032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_69479011_69480349_69480442_69482142_69482216_69594932_69594995_69598421_69598519_69653035_69653098_69697104_69697235_69697705_69697756_69766647_69766754_69769901_69770036_69775953_69776087_69784292_69784361_69785464_69785544_69788031_69788109_69790817_69791022_69808769_69808906_69811037_69811201_69814639_69814870_69815753_69815895_69816147
ENSMUSG00000053483.16_0	chr1	-	2199	13	FSM	ENSMUSG00000053483.16	ENSMUST00000065941.12	2219	13	7	13	7	-9	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAAGTGATGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	171115557	171109531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114544_171115334
ENSMUSG00000053483.16_3	chr1	-	2250	13	FSM	ENSMUSG00000053483.16	ENSMUST00000111305.8	2278	13	10	18	10	-18	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTATTAAGAAAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	171115487	171109540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171109877_171110070_171110186_171110268_171110377_171110588_171110668_171110927_171111015_171111210_171111315_171111534_171111600_171112150_171112310_171112499_171112612_171112827_171112949_171113114_171113175_171113922_171114674_171115334
ENSMUSG00000053510.13_0	chr4	+	4287	31	FSM	ENSMUSG00000053510.13	ENSMUST00000065977.11	4311	31	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGAAATTTCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108857864	108918963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000053510.13_12	chr4	+	4166	29	FSM	ENSMUSG00000053510.13	ENSMUST00000102736.9	4179	29	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCATGAAATTTCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	108857853	108918963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108858362_108870706_108871038_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000053510.13_24	chr4	+	3773	33	FSM	ENSMUSG00000053510.13	ENSMUST00000106644.9	3784	33	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGTATTTAAAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	108857970	108918351	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108858362_108870706_108871038_108873848_108873983_108874823_108874894_108875035_108875118_108876154_108876309_108881400_108881475_108884632_108884729_108885947_108886071_108889646_108889705_108890486_108890561_108891877_108891948_108895171_108895250_108896854_108896976_108897052_108897112_108897381_108897437_108900572_108900678_108901744_108901869_108903791_108903879_108904793_108904914_108906263_108906316_108908035_108908187_108911093_108911222_108912122_108912286_108913486_108913519_108913706_108913846_108915455_108915504_108915778_108915832_108916181_108916266_108916968_108917060_108917265_108917383_108917965_108918056_108918132
ENSMUSG00000053519.18_0	chr11	-	1773	9	FSM	ENSMUSG00000053519.18	ENST00000520740.5	1802	9	26	3	26	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTCTCAATTACTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	33793395	33579789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_33580599_33583147_33583211_33584578_33584684_33592430_33592539_33593295_33593367_33594498_33594569_33595502_33595628_33640610_33640756_33793118
ENSMUSG00000053536.8_0	chr19	+	4212	1	FSM	ENSMUSG00000053536.8	ENSMUST00000066039.8	4233	1	13	8	13	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	453	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAGACACAAATTAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	31060249	31064461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_31060200_31064500
ENSMUSG00000053553.12_0	chr5	-	1428	5	FSM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGACTTTTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139446257	139345494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171_139441302_139446223
ENSMUSG00000053553.12_2	chr5	-	1379	4	ISM	ENSMUSG00000053553.12	ENSMUST00000066052.12	1429	5	4971	1	4971	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGACTTTTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139441286	139345494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_139346486_139347061_139347144_139349727_139349919_139441171
ENSMUSG00000053553.12_5	chr5	-	2029	4	FSM	ENSMUSG00000053553.12	ENSMUST00000198474.2	2030	4	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGACTTTTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	139446282	139345494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139347144_139349727_139349919_139441171_139441302_139446223
ENSMUSG00000053559.14_0	chr15	-	609	3	FSM	ENSMUSG00000053559.14	ENST00000603864.5	622	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCTGGGCCTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	100528639	100519538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100519908_100520509_100520630_100528519
ENSMUSG00000053559.14_2	chr15	-	489	2	ISM	ENSMUSG00000053559.14	ENST00000603864.5	622	3	8018	5	8018	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCTGGGCCTTGATAA	NA	NA	NA	NA	NA	NA	NA	NA	100520629	100519538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_100519908_100520509
ENSMUSG00000053560.6_0	chr8	-	1507	1	FSM	ENSMUSG00000053560.6	ENSMUST00000060427.6	1524	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4328	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGCGCGGCTTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	85389473	85387966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85388000_85389500
ENSMUSG00000053565.11_0	chr7	-	765	8	FSM	ENSMUSG00000053565.11	ENSMUST00000066070.7	774	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATTGTCTCTTGCCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	28681230	28670796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28670864_28671956_28672083_28673573_28673652_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUSG00000053565.11_5	chr7	-	639	7	FSM	ENSMUSG00000053565.11	ENST00000592558.1	652	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCCTATTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	28681189	28670803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28670864_28671956_28672083_28674027_28674095_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUSG00000053565.11_6	chr7	-	448	5	FSM	ENSMUSG00000053565.11	ENST00000588934.5	459	5	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCCTATTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	28681191	28670803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28670864_28676625_28676701_28677294_28677416_28679868_28679968_28681098
ENSMUSG00000053574.6_0	chr11	+	2575	1	FSM	ENSMUSG00000053574.6	ENSMUST00000066087.5	2606	1	23	8	23	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATACGATATTATATTT	NA	NA	NA	NA	NA	NA	NA	NA	72105986	72108561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72106000_72108600
ENSMUSG00000053580.17_0	chr11	+	11848	26	FSM	ENSMUSG00000053580.17	ENSMUST00000100330.10	11855	26	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAAACCTGGTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	105480816	105820123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105481076_105515860_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_13	chr11	+	6342	25	ISM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	48363	4	48363	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCGTTAGGACACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105564246	105814937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053580.17_2	chr11	+	6409	26	FSM	ENSMUSG00000053580.17	ENST00000389520.8	6414	26	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCGTTAGGACACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	105515884	105814937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_105515951_105564245_105564318_105604207_105604280_105667631_105667781_105670764_105670952_105689386_105689651_105701297_105701424_105725774_105726057_105731444_105731579_105748222_105748455_105754742_105754910_105757992_105758601_105777183_105777293_105786671_105786795_105787293_105787531_105790509_105790696_105792885_105792980_105799820_105799955_105801028_105801153_105803737_105803914_105804182_105804316_105804866_105804897_105805717_105805810_105807739_105807887_105810776_105810878_105812573
ENSMUSG00000053581.14_0	chr5	-	3159	7	FSM	ENSMUSG00000053581.14	ENSMUST00000079996.13	3169	7	4	6	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTTATTCTAGACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	139470300	139456971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470020
ENSMUSG00000053581.14_1	chr5	-	3111	7	FSM	ENSMUSG00000053581.14	ENSMUST00000110851.8	3121	7	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTTTTATTCTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	139470267	139456975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139459310_139459484_139459551_139460607_139460760_139464221_139464354_139467720_139467816_139468456_139468553_139470031
ENSMUSG00000053600.9_0	chr17	+	2362	4	FSM	ENSMUSG00000053600.9	ENSMUST00000039132.9	2376	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAGTTGGCTGGCATAG	NA	NA	NA	NA	NA	NA	NA	NA	33184801	33198207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33184904_33194887_33195015_33195200_33195259_33196132
ENSMUSG00000053617.13_0	chr19	-	3437	14	FSM	ENSMUSG00000053617.13	ENSMUST00000111800.4	3437	14	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGCCACTGGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	47452686	47255391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47257376_47258276_47258397_47260446_47260497_47261622_47261958_47266751_47266870_47275043_47275158_47302473_47302606_47308714_47308760_47331878_47331908_47353061_47353154_47361822_47361900_47386254_47386331_47412928_47413010_47452502
ENSMUSG00000053641.10_1	chr9	+	8627	34	FSM	ENSMUSG00000053641.10	ENSMUST00000038890.6	8645	34	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCATGCTGATAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	64718633	64826943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_64718869_64742567_64742635_64743235_64743364_64746094_64746427_64749721_64749972_64756407_64756478_64758493_64758664_64759697_64759940_64764948_64765016_64766580_64766640_64769184_64769330_64769608_64769785_64775043_64775145_64779109_64779329_64780275_64780422_64794138_64794273_64795767_64795904_64796201_64796409_64796497_64796627_64796871_64797014_64800567_64800685_64801679_64801812_64803615_64804713_64811431_64811622_64813282_64813378_64814119_64814296_64814384_64814520_64816782_64816982_64817212_64817468_64818946_64819065_64819168_64819196_64819635_64819799_64819957_64820023_64824240
ENSMUSG00000053644.14_1	chr18	-	4120	20	FSM	ENSMUSG00000053644.14	ENSMUST00000174518.8	4131	20	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGTCTTTTTTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	56706014	56657795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_56660080_56661348_56661425_56664561_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104_56695277_56695554_56695748_56705916
ENSMUSG00000053644.14_13	chr18	-	1479	16	FSM	ENSMUSG00000053644.14	ENST00000637272.1	1489	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGAGGCTCGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56695293	56664560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670363_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56684231_56684313_56692293_56692360_56693847_56693902_56695104
ENSMUSG00000053644.14_14	chr18	-	1285	13	FSM	ENSMUSG00000053644.14	ENST00000636886.1	1296	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTAGAGGCTCGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56695292	56664560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_56664636_56664782_56664881_56665052_56665170_56665559_56665667_56667261_56667347_56670275_56670371_56671772_56671815_56675296_56675395_56678036_56678115_56679975_56680021_56681518_56681652_56683367_56683492_56695104
ENSMUSG00000053646.14_0	chr9	+	8625	38	FSM	ENSMUSG00000053646.14	ENSMUST00000072093.13	8649	38	15	9	15	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGGAAGCTAAGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	108924471	108948976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108924714_108928338_108928392_108929139_108930253_108931088_108931272_108931641_108931771_108931894_108931996_108932282_108932416_108932680_108932838_108933095_108933205_108933290_108933400_108933801_108934477_108934658_108934782_108934983_108935107_108935328_108935423_108935508_108935682_108935827_108935980_108937188_108937295_108937474_108937612_108937866_108938044_108938235_108938366_108938557_108938801_108939417_108939595_108939670_108939820_108940525_108940627_108940714_108940933_108941028_108941208_108941330_108941398_108941572_108941720_108942351_108942521_108942708_108942813_108942887_108942973_108943315_108943489_108943644_108943806_108943890_108944039_108944574_108944640_108944762_108944839_108945650_108945726_108946907
ENSMUSG00000053647.5_0	chr5	+	2518	3	FSM	ENSMUSG00000053647.5	ENSMUST00000066211.5	2537	3	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACCAAGGATGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	139408913	139413544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_139409110_139409415_139409628_139411434
ENSMUSG00000053654.8_0	chr11	-	866	6	FSM	ENSMUSG00000053654.8	ENST00000451704.1	879	6	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGGCCCCTGTCTGCGT	NA	NA	NA	NA	NA	NA	NA	NA	100157857	100153900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100153994_100154119_100154251_100155267_100155525_100155754_100155881_100156425_100156588_100157760
ENSMUSG00000053675.9_0	chr2	-	2588	13	FSM	ENSMUSG00000053675.9	ENSMUST00000028721.8	2613	13	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGGCAGCAGTATGGATT	NA	NA	NA	NA	NA	NA	NA	NA	120916304	120876598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120877014_120877161_120877296_120878853_120879015_120879308_120879675_120882895_120883136_120883219_120883324_120883975_120884115_120901212_120901391_120901968_120902098_120905583_120905703_120907270_120907517_120907969_120908165_120916142
ENSMUSG00000053684.9_0	chr10	+	1221	3	FSM	ENSMUSG00000053684.9	ENST00000544871.1	1236	3	9	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGCGCTTGCCCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	121575836	121587022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_121575957_121581235_121581522_121586207
ENSMUSG00000053687.16_0	chr8	-	1373	10	FSM	ENSMUSG00000053687.16	ENSMUST00000117555.8	1383	10	0	10	0	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAGAAACAGATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	106718381	106711585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106711914_106712025_106712162_106712812_106712889_106714715_106714801_106715310_106715488_106715583_106715654_106715873_106716016_106716100_106716231_106716523_106716651_106718279
ENSMUSG00000053693.17_1	chr8	-	1367	13	FSM	ENSMUSG00000053693.17	ENST00000591495.5	1372	13	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTACGGCCATCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	85672684	85650362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169_85664202_85672635
ENSMUSG00000053693.17_2	chr8	-	1321	12	ISM	ENSMUSG00000053693.17	ENST00000591495.5	1372	13	8480	5	-216	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTACGGCCATCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	85664204	85650362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334_85662424_85664169
ENSMUSG00000053693.17_3	chr8	-	1284	11	ISM	ENSMUSG00000053693.17	ENST00000591495.5	1372	13	10263	5	1561	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTACGGCCATCTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	85662421	85650362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_85650569_85650656_85650743_85651903_85651972_85652037_85652171_85652273_85652376_85655208_85655419_85655578_85655655_85655850_85656012_85657448_85657528_85661872_85661949_85662334
ENSMUSG00000053702.17_0	chr2	-	5763	7	FSM	ENSMUSG00000053702.17	ENSMUST00000028080.12	5780	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCATTATTTCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	17735846	17348728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_17353682_17355515_17355623_17378995_17379168_17534720_17534829_17594903_17594989_17734179_17734275_17735603
ENSMUSG00000053706.3_0	chr3	-	6641	1	FSM	ENSMUSG00000053706.3	ENSMUST00000066298.3	3702	1	-2440	-499	-2440	499	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAACAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	61275812	61269171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_61269200_61275800
ENSMUSG00000053716.10_0	chr9	+	3192	3	FSM	ENSMUSG00000053716.10	ENSMUST00000172306.3	3213	3	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGAGTCCTGGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	106245848	106252920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106246523_106247899_106248335_106250837
ENSMUSG00000053730.16_0	chr4	-	1795	9	FSM	ENSMUSG00000053730.16	ENSMUST00000102588.10	1810	9	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTCTGAACAAGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	129590626	129570157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129570602_129572364_129572486_129578104_129578293_129580563_129580901_129585760_129585916_129586225_129586310_129586858_129587079_129587678_129587806_129590507
ENSMUSG00000053746.9_0	chr2	+	928	5	FSM	ENSMUSG00000053746.9	ENSMUST00000066352.6	952	5	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGAAATTGGAAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	32665812	32667600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32665908_32666315_32666536_32666718_32666819_32666994_32667041_32667133
ENSMUSG00000053746.9_2	chr2	+	471	3	FSM	ENSMUSG00000053746.9	ENST00000423807.5	485	3	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACCATTGTCAGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	32666324	32667293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32666536_32666718_32666819_32667133
ENSMUSG00000053754.15_0	chr14	-	8182	37	FSM	ENSMUSG00000053754.15	ENSMUST00000089752.11	8190	37	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTTTCCATTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	52475029	52435615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186
ENSMUSG00000053754.15_3	chr14	-	8141	38	FSM	ENSMUSG00000053754.15	ENST00000557364.6	8154	38	7	6	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAGGTGAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52481957	52435940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481889
ENSMUSG00000053754.15_4	chr14	-	8247	39	FSM	ENSMUSG00000053754.15	ENST00000643469.1	8262	39	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAGGTGAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	52481989	52435940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52436610_52439087_52439205_52439600_52439781_52439960_52440075_52441333_52441637_52441889_52442042_52442246_52442964_52443052_52443262_52444307_52444516_52444691_52444747_52445446_52445523_52447942_52448073_52449272_52449377_52449853_52449944_52450019_52450177_52450280_52450481_52450709_52450907_52451669_52451781_52451925_52452106_52452629_52452798_52453339_52453536_52453698_52453910_52455172_52455429_52455629_52455774_52457053_52457231_52458370_52458615_52458759_52458882_52459938_52460077_52462082_52462167_52463494_52463613_52464069_52464126_52464692_52464762_52464954_52465138_52468894_52469010_52470001_52470388_52472580_52472959_52474186_52475246_52481584_52481659_52481889
ENSMUSG00000053768.14_0	chr6	-	1533	8	FSM	ENSMUSG00000053768.14	ENSMUST00000066379.11	1550	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATTTTCTGACTAAG	NA	NA	NA	NA	NA	NA	NA	NA	33037185	32769158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_4	chr6	-	990	8	FSM	ENSMUSG00000053768.14	ENST00000448878.6	1009	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAACCACAAAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	33037094	32769619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_32769862_32780824_32780961_32829079_32829151_32869226_32869311_32945126_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053768.14_9	chr6	-	1334	6	FSM	ENSMUSG00000053768.14	ENSMUST00000115091.2	1363	6	17	12	17	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCTTAAGGTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	33037135	32828389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_32829151_32869226_32869311_32945135_32945254_32985417_32985500_33026271_33026360_33036934
ENSMUSG00000053769.6_0	chr3	+	2388	3	FSM	ENSMUSG00000053769.6	ENSMUST00000066386.6	2394	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGCTTTAGTGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95041404	95046829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95042308_95044935_95045298_95045706
ENSMUSG00000053774.10_0	chr16	+	10307	11	FSM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATGTTTTGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32151076	32212561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32151179_32171616_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ENSMUSG00000053774.10_2	chr16	+	10206	10	ISM	ENSMUSG00000053774.10	ENSMUST00000115151.5	10313	11	20541	4	20530	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTATGTTTTGAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	32171615	32212561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_32171765_32178825_32178894_32186161_32186228_32188132_32188246_32191211_32191359_32194044_32194136_32194714_32194843_32200079_32200474_32200583_32200664_32203591
ENSMUSG00000053797.11_0	chr11	-	1572	7	FSM	ENSMUSG00000053797.11	ENST00000301653.9	1589	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAACTTGTGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	100139740	100136923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100137204_100137435_100137657_100137927_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053797.11_1	chr11	-	631	2	FSM	ENSMUSG00000053797.11	ENST00000584759.1	648	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAACTTGTGTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	100137648	100136923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100137342_100137435
ENSMUSG00000053797.11_8	chr11	-	1514	5	FSM	ENSMUSG00000053797.11	ENST00000580621.5	1526	5	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATCCAGTGAGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	100139701	100137445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100138054_100138139_100138302_100138387_100138545_100138682_100138766_100139197
ENSMUSG00000053799.9_0	chr19	+	3721	23	FSM	ENSMUSG00000053799.9	ENSMUST00000238954.2	3728	23	4	3	4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCGGAGATTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37509330	37672504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37509509_37525196_37525348_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUSG00000053799.9_3	chr19	+	3520	22	FSM	ENSMUSG00000053799.9	ENSMUST00000066439.8	3543	22	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTCGGAGATTCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	37538885	37672504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37539014_37558830_37559003_37560040_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUSG00000053799.9_6	chr19	+	2671	22	FSM	ENSMUSG00000053799.9	ENSMUST00000238817.2	2692	22	4	17	4	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATTAGAAAAAACATGT	NA	NA	NA	NA	NA	NA	NA	NA	37538910	37671686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_37539014_37558830_37559003_37560046_37560089_37560305_37560397_37562159_37562206_37565383_37565589_37566867_37567024_37570640_37570710_37574258_37574343_37576085_37576133_37576264_37576386_37578298_37578371_37579315_37579414_37582109_37582216_37585542_37585653_37587013_37587126_37588006_37588142_37597373_37597554_37628069_37628212_37641830_37641905_37670107_37670221_37671293
ENSMUSG00000053801.19_0	chr7	-	1881	7	FSM	ENSMUSG00000053801.19	ENSMUST00000107723.9	1898	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGCTACAAGTCCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	45480204	45474658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018
ENSMUSG00000053801.19_1	chr7	-	1960	8	FSM	ENSMUSG00000053801.19	ENSMUST00000131384.3	1974	8	5	9	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACAAGTCCTCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	45480363	45474655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45475518_45476564_45476763_45476949_45477093_45477203_45477418_45479405_45479569_45479715_45479834_45480018_45480214_45480296
ENSMUSG00000053819.17_0	chr3	+	4168	20	FSM	ENSMUSG00000053819.17	ENSMUST00000106402.8	4180	20	10	2	1	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGTCCATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	126390609	126638560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126599505_126599566_126601856_126601899_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
ENSMUSG00000053819.17_1	chr3	+	4049	19	FSM	ENSMUSG00000053819.17	ENSMUST00000066466.13	4075	19	22	4	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGTGTCCATTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	126390668	126638560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126601856_126601899_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
ENSMUSG00000053819.17_15	chr3	+	2714	18	FSM	ENSMUSG00000053819.17	ENSMUST00000106400.9	2722	18	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGATTAAAATAAAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	126390745	126637344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126636406
ENSMUSG00000053819.17_16	chr3	+	5391	21	FSM	ENSMUSG00000053819.17	ENSMUST00000200171.5	5396	21	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCATTAAATAAAATCCT	NA	NA	NA	NA	NA	NA	NA	NA	126390854	126639939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126599505_126599566_126601856_126601899_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ENSMUSG00000053819.17_18	chr3	+	2195	21	FSM	ENSMUSG00000053819.17	ENSMUST00000171289.8	2217	21	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTCACTTTTAAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	126390978	126636867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126565422_126565496_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126599505_126599566_126601856_126601899_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ENSMUSG00000053819.17_3	chr3	+	5511	19	FSM	ENSMUSG00000053819.17	ENSMUST00000199300.5	5524	19	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTATCATGTCTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	126390662	126639969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_126391154_126392714_126392810_126478308_126478369_126523055_126523111_126561162_126561229_126564433_126564507_126574008_126574112_126577603_126577688_126589012_126589108_126590486_126590610_126591350_126591435_126591886_126591930_126595372_126595411_126604287_126604337_126628222_126628299_126631911_126632007_126633785_126634015_126635133_126635223_126636406
ENSMUSG00000053825.16_0	chr10	+	5363	31	FSM	ENSMUSG00000053825.16	ENST00000550584.6	5385	31	9	13	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTATCAATAAAACAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	106306170	106768347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_112	chr10	+	2958	20	FSM	ENSMUSG00000053825.16	ENST00000541570.6	2975	20	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCCTTAGAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	106671346	106767466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_106671466_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106766983
ENSMUSG00000053825.16_41	chr10	+	4010	31	FSM	ENSMUSG00000053825.16	ENST00000548586.5	4030	31	12	8	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCAGCACTGACCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	106306213	106764986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106739503_106739567_106740677_106740708_106742244_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106764914
ENSMUSG00000053825.16_66	chr10	+	3957	30	FSM	ENSMUSG00000053825.16	ENST00000552948.5	3973	30	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAAGGAGGCAGCACTG	NA	NA	NA	NA	NA	NA	NA	NA	106306214	106764979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_106306453_106310492_106310744_106393106_106393161_106579347_106579450_106597843_106598009_106603334_106603410_106636597_106636715_106655196_106655419_106664749_106664897_106666426_106666562_106671556_106671641_106671912_106672045_106673141_106673205_106678546_106678639_106690797_106690934_106693269_106693491_106694021_106694260_106695637_106695668_106699114_106699246_106701107_106701263_106705739_106705834_106729292_106729375_106732178_106732380_106740677_106740708_106742226_106742421_106743573_106743672_106749425_106749602_106751541_106751611_106763563_106763724_106764914
ENSMUSG00000053835.18_0	chr17	-	2178	6	FSM	ENSMUSG00000053835.18	ENSMUST00000113760.10	2182	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAAGCAGGTTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	36331452	36316590	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36317682_36325448_36325589_36325691_36325968_36326275_36326549_36328132_36328430_36331351
ENSMUSG00000053838.15_0	chr11	-	3912	6	FSM	ENSMUSG00000053838.15	ENSMUST00000066496.10	3927	6	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGGGTTTGTTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	6150406	6055696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6058356_6063242_6063432_6075417_6075562_6100494_6100628_6143153_6143477_6149942
ENSMUSG00000053841.16_0	chr4	-	4558	11	FSM	ENSMUSG00000053841.16	ENSMUST00000046425.16	4569	11	5	6	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATCTCAGCCAATCG	NA	NA	NA	NA	NA	NA	NA	NA	129534853	129519876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048_129534221_129534763
ENSMUSG00000053841.16_1	chr4	-	4831	10	FSM	ENSMUSG00000053841.16	ENSMUST00000084264.12	4847	10	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATCTCAGCCAATCG	NA	NA	NA	NA	NA	NA	NA	NA	129534583	129519876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129522992_129523343_129523440_129524104_129524198_129525072_129525148_129525383_129525504_129525882_129526078_129528167_129528339_129530888_129530981_129533021_129533361_129534048
ENSMUSG00000053846.6_0	chr18	-	3764	10	FSM	ENSMUSG00000053846.6	ENSMUST00000066532.5	3787	10	17	6	17	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCTCAGTTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	75094317	75072398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_75074410_75076410_75076516_75078874_75079094_75080076_75080198_75081043_75081287_75082128_75082351_75087248_75087361_75088489_75088670_75090268_75090451_75093948
ENSMUSG00000053870.8_0	chr3	-	3515	4	FSM	ENSMUSG00000053870.8	ENSMUST00000066568.6	3518	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAGAAATTTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	154799040	154790557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_154793707_154795748_154795842_154797027_154797196_154798935
ENSMUSG00000053877.13_0	chr7	+	2040	10	FSM	ENSMUSG00000053877.13	ENSMUST00000188124.7	2048	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCAGTTATTGAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	127111162	127128494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127111511_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128309
ENSMUSG00000053877.13_1	chr7	+	10641	34	FSM	ENSMUSG00000053877.13	ENSMUST00000187040.7	10654	34	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCATCCGTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	127112195	127160384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127112296_127113336_127113413_127115113_127115374_127118752_127119005_127120647_127120834_127121160_127121302_127124464_127124688_127124802_127125078_127127567_127127662_127128306_127128397_127129354_127129532_127129611_127129971_127130065_127130244_127130506_127130644_127130891_127131062_127131198_127131392_127133719_127133857_127133946_127134134_127137172_127137343_127137674_127137941_127138120_127138409_127138928_127139094_127139422_127139606_127139827_127140095_127140413_127141880_127148311_127148578_127148704_127148908_127151430_127151601_127151739_127151937_127152033_127152149_127152346_127152467_127156579_127156781_127156937_127157022_127157139
ENSMUSG00000053886.5_0	chr8	+	1152	7	FSM	ENSMUSG00000053886.5	ENST00000265807.8	1174	7	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCAGTTTAAGGGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	68734893	68799562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_68735064_68746954_68747047_68781933_68782013_68783686_68783889_68787716_68787848_68798604_68798826_68799305
ENSMUSG00000053889.6_0	chr9	-	3720	3	ISM	ENSMUSG00000053889.6	ENSMUST00000066604.4	3799	4	1220	6	1220	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCGAACGGATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34839585	34829534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_34833002_34834155_34834310_34839486
ENSMUSG00000053889.6_1	chr9	-	3793	4	FSM	ENSMUSG00000053889.6	ENSMUST00000066604.4	3799	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGCGAACGGATTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	34840805	34829534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_34833002_34834155_34834310_34839486_34839616_34840762
ENSMUSG00000053897.16_1	chr3	+	3083	9	FSM	ENSMUSG00000053897.16	ENST00000682227.1	3096	9	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAACAGTAAAAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135531719	135594126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135531771_135532000_135532452_135554776_135554940_135561664_135561835_135563243_135563367_135563831_135564003_135589957_135590166_135590362_135590548_135592565
ENSMUSG00000053897.16_5	chr3	+	3026	8	FSM	ENSMUSG00000053897.16	ENSMUST00000029810.6	3203	8	156	21	156	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAACAGTAAAAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	135532006	135594126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135532452_135554776_135554940_135561664_135561835_135563243_135563367_135563831_135564003_135589957_135590166_135590362_135590548_135592565
ENSMUSG00000053898.13_0	chr7	+	1253	10	FSM	ENSMUSG00000053898.13	ENSMUST00000066264.13	1267	10	8	6	8	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	1999	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCGGGGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	28524649	28531666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28524838_28525298_28525504_28525609_28525699_28529224_28529350_28529426_28529476_28529638_28529704_28530641_28530713_28530813_28530886_28531141_28531293_28531428
ENSMUSG00000053907.11_0	chr6	-	3374	8	FSM	ENSMUSG00000053907.11	ENSMUST00000205335.2	3387	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAACTGTGTCTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	72416530	72409785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUSG00000053907.11_1	chr6	-	2788	9	FSM	ENSMUSG00000053907.11	ENSMUST00000059472.10	2804	9	12	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCAAACTGTGTCTATTAC	NA	NA	NA	NA	NA	NA	NA	NA	72416529	72409785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72411379_72411963_72412098_72412188_72412372_72412793_72413013_72413179_72413324_72413399_72413513_72413977_72414101_72414353_72414432_72416328
ENSMUSG00000053907.11_10	chr6	-	149	2	FSM	ENSMUSG00000053907.11	ENST00000477975.2	158	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGAAAGTGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	72412023	72411284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72411379_72411968
ENSMUSG00000053916.5_0	chr2	-	1381	2	FSM	ENSMUSG00000053916.5	ENSMUST00000066640.5	1394	2	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTTTAGAGTGATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	150881306	150871605	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150872837_150881156
ENSMUSG00000053929.18_2	chr15	-	2125	4	FSM	ENSMUSG00000053929.18	ENST00000530374.6	2139	4	6	8	5	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAAAAAAATCAACT	NA	NA	NA	NA	NA	NA	NA	NA	76541115	76529656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76530775_76532298_76532511_76533140_76533380_76540559
ENSMUSG00000053929.18_3	chr15	-	1840	4	FSM	ENSMUSG00000053929.18	ENSMUST00000176274.2	1854	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTATCCTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	76541115	76531135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76531969_76532298_76532511_76533140_76533380_76540559
ENSMUSG00000053929.18_5	chr15	-	1253	2	FSM	ENSMUSG00000053929.18	ENSMUST00000231152.2	1271	2	7	11	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGAGTATGGAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	76543949	76542343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76543066_76543418
ENSMUSG00000053929.18_7	chr15	-	1144	3	FSM	ENSMUSG00000053929.18	ENSMUST00000066677.10	1168	3	12	12	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATATACAGGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	76544296	76542350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76543066_76543418_76543706_76544154
ENSMUSG00000053929.18_8	chr15	-	1092	3	FSM	ENSMUSG00000053929.18	ENSMUST00000177359.2	1110	3	7	11	-2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAATATACAGGAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	76544310	76542350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76543066_76543418_76543640_76544154
ENSMUSG00000053931.12_0	chr3	+	2032	7	FSM	ENSMUSG00000053931.12	ENSMUST00000029773.13	2049	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCACAGGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	121220155	121251849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_121220478_121243597_121243720_121243940_121244008_121245031_121245170_121245531_121245649_121248595_121248743_121250730
ENSMUSG00000053985.11_0	chr7	-	3361	4	ISM	ENSMUSG00000053985.11	ENSMUST00000207873.2	3411	5	5549	6	-1097	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCAATATATGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29745256	29735789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163
ENSMUSG00000053985.11_1	chr7	-	3405	5	FSM	ENSMUSG00000053985.11	ENSMUST00000207873.2	3411	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCAATATATGCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	29750805	29735789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29738842_29742954_29743082_29744144_29744234_29745163_29745265_29750769
ENSMUSG00000054000.6_0	chr4	-	1336	1	FSM	ENSMUSG00000054000.6	ENSMUST00000066774.6	1374	1	24	14	24	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAATCAAAAATTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	93223724	93222388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_93222400_93223700
ENSMUSG00000054003.14_0	chr12	+	4370	36	FSM	ENSMUSG00000054003.14	ENST00000409874.9	4388	36	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAATAGTCGAGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	111938078	112034931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111938297_111951432_111951540_111958895_111958994_111960141_111960364_111960877_111961001_111963220_111963302_111964231_111964397_111968157_111968259_111973945_111974011_111979699_111979755_111979915_111980001_111980875_111980934_111982291_111982397_111989675_111989774_111991095_111991228_111991942_111992109_111992208_111992273_111992344_111992413_111992686_111992732_111993528_111993583_111997621_111997739_111999112_111999221_112001015_112001117_112002787_112002962_112005737_112005850_112006858_112007072_112008095_112008186_112009119_112009381_112010719_112010876_112011233_112011305_112012589_112012700_112013389_112013487_112018301_112018441_112029934_112030054_112034036_112034110_112034612
ENSMUSG00000054008.10_0	chr18	-	5254	3	FSM	ENSMUSG00000054008.10	ENSMUST00000235795.2	5262	3	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGTCTTGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	60860628	60817566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60821920_60845879_60846705_60860552
ENSMUSG00000054008.10_12	chr18	-	3481	14	FSM	ENSMUSG00000054008.10	ENST00000523767.5	3494	14	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTCTTCTGTCCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	60869883	60821908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846697_60869677
ENSMUSG00000054008.10_2	chr18	-	6443	15	FSM	ENSMUSG00000054008.10	ENSMUST00000237783.2	6478	15	12	23	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTCATTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	60881710	60819057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_60822437_60823035_60823139_60824249_60824360_60825000_60825172_60828407_60828583_60830138_60830263_60831510_60831608_60832579_60832763_60833443_60833573_60835844_60836031_60836808_60836964_60838147_60838236_60840672_60841168_60845794_60846705_60881572
ENSMUSG00000054013.7_0	chr12	-	2353	4	FSM	ENSMUSG00000054013.7	ENSMUST00000066791.7	2380	4	26	1	26	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCTGTGTGGATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	112477580	112466623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112468357_112469675_112469755_112470967_112471106_112477177
ENSMUSG00000054021.7_0	chr13	+	1532	9	FSM	ENSMUSG00000054021.7	ENSMUST00000221481.2	1548	9	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGGAAAAGAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	43518971	43541116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43519021_43524194_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43536584_43536709_43538973_43539090_43540525
ENSMUSG00000054021.7_10	chr13	+	839	7	FSM	ENSMUSG00000054021.7	ENST00000359782.8	876	7	28	9	28	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGGACTTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	43524249	43548268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43536584_43536709_43538973_43539090_43548212
ENSMUSG00000054021.7_11	chr13	+	783	7	FSM	ENSMUSG00000054021.7	ENST00000680402.1	806	7	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGAAAGGACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	43524232	43548265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533148_43533237_43533975_43534030_43538973_43539090_43548212
ENSMUSG00000054021.7_15	chr13	+	684	6	FSM	ENSMUSG00000054021.7	ENST00000681243.1	718	6	22	12	22	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACTGAAAGGACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	43524243	43548265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43524345_43525307_43525442_43530170_43530397_43533975_43534030_43538973_43539090_43548212
ENSMUSG00000054027.9_0	chr10	+	5926	14	FSM	ENSMUSG00000054027.9	ENSMUST00000099396.3	5952	14	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTTAGACCTATCG	NA	NA	NA	NA	NA	NA	NA	NA	86614894	86674253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_86615176_86640644_86640830_86647393_86647469_86648188_86648245_86651717_86651809_86652816_86652955_86656070_86656132_86656531_86656635_86656773_86656876_86658927_86659010_86660050_86660138_86661018_86661160_86667563_86667629_86669794
ENSMUSG00000054051.8_0	chr14	+	8421	21	FSM	ENSMUSG00000054051.8	ENSMUST00000066807.8	8423	21	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGACAGTTTTCCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32235478	32302946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32235557_32238903_32239336_32240899_32241021_32242904_32243017_32248105_32248836_32263182_32263312_32268701_32268861_32274531_32274668_32279795_32279967_32280384_32280562_32282665_32282783_32284512_32284609_32288199_32288416_32288740_32288852_32289464_32289585_32289943_32290039_32291469_32291616_32291695_32292389_32296762_32296968_32297710_32297784_32298642
ENSMUSG00000054057.3_0	chr2	-	3205	2	FSM	ENSMUSG00000054057.3	ENSMUST00000066163.3	3217	2	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAAATAAAATAGCCTACT	NA	NA	NA	NA	NA	NA	NA	NA	18042541	18030008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_18033050_18042377
ENSMUSG00000054065.13_0	chr7	+	2831	13	FSM	ENSMUSG00000054065.13	ENSMUST00000066873.5	2848	13	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACAGCCCCAGCTCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	140659683	140670417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140660015_140662254_140662335_140662467_140663100_140663175_140663300_140663967_140664173_140667548_140667724_140668196_140668315_140668393_140668565_140668651_140668838_140669157_140669312_140669481_140669675_140669768_140669857_140670043
ENSMUSG00000054074.10_0	chr2	-	2670	2	FSM	ENSMUSG00000054074.10	ENST00000444772.3	2688	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCCATTAATGGTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	18053236	18050344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_18052260_18052481
ENSMUSG00000054079.13_0	chr11	-	2594	14	FSM	ENSMUSG00000054079.13	ENSMUST00000066888.10	2613	14	9	10	9	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	1403	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATTTACACATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	93776583	93750078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93750895_93751619_93751664_93752784_93752928_93757171_93757347_93759156_93759281_93760631_93760723_93761305_93761407_93766609_93766785_93766880_93767007_93768809_93768899_93770888_93770960_93772900_93773000_93774492_93774609_93776159
ENSMUSG00000054091.10_0	chr3	+	1138	2	FSM	ENSMUSG00000054091.10	ENSMUST00000106429.6	1160	2	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTGAATTTAGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	122717863	122719823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122718306_122719127
ENSMUSG00000054099.12_0	chr5	+	2758	12	FSM	ENSMUSG00000054099.12	ENSMUST00000066921.10	2784	12	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATACAGATGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	8472863	8504785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8473040_8477195_8477268_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUSG00000054099.12_1	chr5	+	2590	11	FSM	ENSMUSG00000054099.12	ENSMUST00000170496.6	2602	11	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTACCATGTTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	8472905	8504731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_8473040_8477407_8477517_8478628_8478689_8480411_8480519_8490720_8490789_8492446_8492572_8493611_8493786_8497297_8497408_8499612_8499695_8502745_8502827_8503191
ENSMUSG00000054115.13_0	chr15	-	1521	10	FSM	ENSMUSG00000054115.13	ENST00000678270.1	1538	10	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGTATCAAGTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	9140423	9108282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_9108598_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ENSMUSG00000054115.13_5	chr15	-	3096	10	FSM	ENSMUSG00000054115.13	ENSMUST00000096482.10	3118	10	12	10	-9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAACAAGTACTTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9140440	9112082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9121638_9121770_9122323_9122423_9123956_9124092_9125146_9125291_9127972_9128085_9139518_9139791_9140270
ENSMUSG00000054115.13_7	chr15	-	969	4	FSM	ENSMUSG00000054115.13	ENST00000679015.1	984	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGGCGGAAAGCAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	9140421	9113297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9140270
ENSMUSG00000054115.13_9	chr15	-	663	4	FSM	ENSMUSG00000054115.13	ENST00000508514.5	671	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTCTGGAACGAGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9139785	9113719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_9113956_9116947_9117056_9117177_9117230_9139518
ENSMUSG00000054116.2_0	chr5	-	273	1	FSM	ENSMUSG00000054116.2	ENSMUST00000066954.2	306	1	26	7	26	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATGACGTCACCGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	25428125	25427852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_25427900_25428100
ENSMUSG00000054136.7_0	chr15	+	1270	3	FSM	ENSMUSG00000054136.7	ENSMUST00000066991.7	1298	3	25	3	25	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGTGGCCACTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	89206947	89208931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89207337_89207479_89207604_89208174
ENSMUSG00000054146.9_0	chr11	-	2428	7	FSM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGAACAACCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	100029953	100022831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100022922_100023782_100024038_100024214_100024341_100024455_100024618_100025000_100025158_100026207_100027784_100029891
ENSMUSG00000054146.9_1	chr11	-	2359	6	ISM	ENSMUSG00000054146.9	ENST00000393974.7	2434	7	2177	6	-1022	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGAACAACCTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	100027776	100022831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_100022922_100023782_100024038_100024214_100024341_100024455_100024618_100025000_100025158_100026207
ENSMUSG00000054150.13_3	chr12	-	2945	17	FSM	ENSMUSG00000054150.13	ENST00000682763.1	2955	17	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	879	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCCTCAGAGGCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	104942144	104898397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_104898619_104905840_104905880_104906864_104907015_104909563_104909723_104911339_104911470_104912824_104912998_104913150_104913313_104919244_104919380_104920421_104920566_104921785_104921969_104924212_104924388_104925655_104925790_104927584_104927933_104929429_104929587_104934136_104934451_104935459_104935633_104941996
ENSMUSG00000054162.16_0	chr8	+	1559	9	FSM	ENSMUSG00000054162.16	ENST00000510741.5	1579	9	15	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTGAACCACAATAATTTC	NA	NA	NA	NA	NA	NA	NA	NA	63404846	63808805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_63405023_63566576_63566623_63596932_63597048_63673673_63673798_63698132_63698248_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054162.16_1	chr8	+	2648	9	FSM	ENSMUSG00000054162.16	ENST00000541354.5	2661	9	6	7	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAAGTAAACAGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	63404839	63809882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_63405023_63566576_63566623_63673673_63673798_63698132_63698248_63781897_63782018_63798698_63798921_63801953_63802017_63805214_63805353_63808245
ENSMUSG00000054191.10_0	chr8	+	1497	3	FSM	ENSMUSG00000054191.10	ENSMUST00000067060.10	1530	3	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAACCAGTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	85628581	85631912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85628745_85629317_85630132_85631392
ENSMUSG00000054196.8_0	chr15	+	1146	4	FSM	ENSMUSG00000054196.8	ENSMUST00000067072.5	1166	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTAAGTATTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	38940337	38950507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_38940555_38943877_38944100_38947660_38947878_38950017
ENSMUSG00000054199.18_21	chr3	+	1921	8	FSM	ENSMUSG00000054199.18	ENST00000295566.8	1937	8	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGAGCCCAAGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	88787385	88803143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88787482_88794212_88794412_88794865_88794953_88796977_88797147_88798119_88798265_88799884_88799976_88801748_88801866_88802126
ENSMUSG00000054204.7_0	chr12	+	586	4	FSM	ENSMUSG00000054204.7	ENST00000401503.5	588	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTACAATTAAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30937042	30943628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_30937099_30937178_30937260_30940031_30940116_30943263
ENSMUSG00000054204.7_2	chr12	+	522	3	ISM	ENSMUSG00000054204.7	ENST00000401503.5	588	4	144	2	144	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCTACAATTAAAATCCCA	NA	NA	NA	NA	NA	NA	NA	NA	30937186	30943628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_30937260_30940031_30940116_30943263
ENSMUSG00000054215.3_0	chr3	+	634	2	FSM	ENSMUSG00000054215.3	ENSMUST00000067102.3	637	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTATAGAAGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92339888	92341229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_92339929_92340635
ENSMUSG00000054215.3_1	chr3	+	581	1	ISM	ENSMUSG00000054215.3	ENSMUST00000067102.3	637	2	756	7	756	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGATGGTATAGAAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92340644	92341225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_92340600_92341200
ENSMUSG00000054226.14_11	chr6	+	2044	5	ISM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	5687	4	-2927	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85898415	85907260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUSG00000054226.14_14	chr6	+	619	4	FSM	ENSMUSG00000054226.14	ENST00000318190.7	637	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGATGTTTAAAATGTCA	NA	NA	NA	NA	NA	NA	NA	NA	85901351	85905840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85901505_85904139_85904346_85904789_85904967_85905757
ENSMUSG00000054226.14_2	chr6	+	2216	7	FSM	ENSMUSG00000054226.14	ENSMUST00000113753.8	2222	7	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85892719	85907260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85892773_85896898_85897007_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUSG00000054226.14_4	chr6	+	2099	6	FSM	ENSMUSG00000054226.14	ENSMUST00000067137.14	2103	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	85892728	85907260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85892773_85898404_85898494_85901341_85901505_85904222_85904346_85904789_85904967_85905757
ENSMUSG00000054237.7_0	chr19	-	1389	14	FSM	ENSMUSG00000054237.7	ENSMUST00000067167.6	1402	14	8	5	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAAAATGTCAGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	38212578	38176933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_38177249_38178276_38178356_38184144_38184184_38188007_38188127_38189994_38190038_38193143_38193258_38195710_38195757_38201808_38201894_38202821_38202906_38204278_38204356_38207905_38207952_38208079_38208176_38210284_38210362_38212409
ENSMUSG00000054263.13_0	chr15	+	4117	20	FSM	ENSMUSG00000054263.13	ENSMUST00000067190.12	4143	20	22	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTATAATGGTTATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	7159061	7221220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7159308_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ENSMUSG00000054263.13_2	chr15	+	2828	17	FSM	ENSMUSG00000054263.13	ENSMUST00000164529.9	2844	17	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCATACATGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	7159060	7214816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7159308_7160381_7160520_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
ENSMUSG00000054263.13_3	chr15	+	2478	16	FSM	ENSMUSG00000054263.13	ENSMUST00000227727.2	2489	16	0	11	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCATACATGCGGCA	NA	NA	NA	NA	NA	NA	NA	NA	7170029	7214816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7170065_7183867_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7214547
ENSMUSG00000054263.13_4	chr15	+	9634	19	FSM	ENSMUSG00000054263.13	ENSMUST00000171588.2	9655	19	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAGTAAATTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	7183848	7226964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_7184029_7186636_7186749_7188871_7189003_7194009_7194174_7196363_7196539_7198492_7198748_7202336_7202467_7202871_7203042_7205040_7205187_7206912_7207076_7207384_7207456_7208279_7208494_7211333_7211514_7214197_7214300_7215046_7215215_7216346_7216509_7217555_7217650_7219595_7219675_7220026
ENSMUSG00000054272.7_0	chr7	+	2259	4	FSM	ENSMUSG00000054272.7	ENSMUST00000131379.4	2276	4	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAACAATTGCTCAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10739677	10744463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_10739779_10740385_10740858_10742693_10742854_10742937
ENSMUSG00000054277.9_0	chr15	-	2599	16	FSM	ENSMUSG00000054277.9	ENSMUST00000067215.9	2619	16	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACAGCAGACGGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	83234437	83183948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194586_83197669_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211866_83214719_83214808_83216886_83216971_83218678_83218811_83220854_83220928_83227222_83227342_83234281
ENSMUSG00000054277.9_9	chr15	-	1450	14	FSM	ENSMUSG00000054277.9	ENST00000437119.6	1464	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGGTGCCAGGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83234389	83184887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83184904_83187303_83187426_83191081_83191173_83192253_83192378_83194450_83194583_83197690_83197814_83198540_83198670_83206774_83206915_83208304_83208352_83211805_83211944_83216882_83216971_83220854_83220928_83227222_83227342_83234281
ENSMUSG00000054280.15_0	chr5	-	9923	11	FSM	ENSMUSG00000054280.15	ENSMUST00000120129.9	9959	11	25	11	25	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAGATAATTGTCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	33011575	32947174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_32951177_32952933_32953006_32977209_32977317_32977936_32978109_32979410_32979483_32984301_32988896_32989148_32989203_32992959_32993033_33001387_33001909_33009225_33009343_33011436
ENSMUSG00000054293.11_0	chrX	+	3024	2	FSM	ENSMUSG00000054293.11	ENSMUST00000167673.2	3044	2	13	7	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCATTTTGTTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	106192545	106217260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_106192754_106214444
ENSMUSG00000054302.16_0	chr12	-	4162	6	FSM	ENSMUSG00000054302.16	ENSMUST00000161592.8	4186	6	9	15	9	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAATCACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	54742657	54717139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_4	chr12	-	2639	7	NNC	ENSMUSG00000054302.16	novel	2658	7	NA	NA	6	-10	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACAGACATACATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	54742660	54718449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_54718634_54718849_54720636_54725294_54725409_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_41	chr12	-	878	5	FSM	ENSMUSG00000054302.16	ENSMUST00000110713.10	886	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAGGAGTGGTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	54742600	54720252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54720636_54732644_54732757_54738784_54738881_54739559_54739742_54742495
ENSMUSG00000054302.16_44	chr12	-	576	3	FSM	ENSMUSG00000054302.16	ENSMUST00000067272.9	590	3	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATCTTTATGAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	54742676	54720263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54720576_54739658_54739742_54742495
ENSMUSG00000054304.4_0	chr4	-	1473	1	NIC	ENSMUSG00000054304.4	novel	1505	2	NA	NA	26	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTCCAAAAACAAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	123797401	123795928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_-_123795900_123797400
ENSMUSG00000054309.10_0	chr12	+	2486	18	FSM	ENSMUSG00000054309.10	ENSMUST00000067284.10	2499	18	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCAAATGTTGTGCCACA	NA	NA	NA	NA	NA	NA	NA	NA	21336366	21365052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_21336546_21340248_21340313_21341751_21341850_21343226_21343356_21345030_21345209_21346647_21346738_21347789_21347941_21350042_21350219_21351416_21351576_21352359_21352507_21355303_21355457_21356773_21356883_21357993_21358093_21358904_21359000_21360197_21360286_21362298_21362369_21363767_21363865_21364648
ENSMUSG00000054312.7_0	chr3	-	480	3	FSM	ENSMUSG00000054312.7	ENSMUST00000067298.5	488	3	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACAGAAGCTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	95778828	95769950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95770245_95777805_95777928_95778764
ENSMUSG00000054312.7_1	chr3	-	413	2	FSM	ENSMUSG00000054312.7	ENSMUST00000072587.5	405	2	7	-15	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACAGAAGCTGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	95777924	95769950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95770245_95777805
ENSMUSG00000054320.17_0	chr8	+	1679	9	FSM	ENSMUSG00000054320.17	ENST00000435835.3	1700	9	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGTATTATGATGACT	NA	NA	NA	NA	NA	NA	NA	NA	106154330	106190695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106154456_106158156_106158246_106170365_106170494_106172839_106172889_106176018_106176460_106178638_106178926_106185027_106185152_106187649_106187765_106190374
ENSMUSG00000054321.8_0	chr18	+	5123	15	FSM	ENSMUSG00000054321.8	ENSMUST00000234789.2	5134	15	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTAATAACAAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	14916301	15033405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_14916992_14929969_14930116_14932135_14932244_14937522_14937685_14937773_14937897_14940401_14940492_14946147_14946748_14954494_14954613_14955150_14955263_14963075_14963246_14968848_14968980_14974961_14975088_14977470_14977528_14992228_14992334_15031020
ENSMUSG00000054342.9_0	chr7	+	1926	9	FSM	ENSMUSG00000054342.9	ENSMUST00000205428.2	1945	9	8	11	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	877	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAAACGAAGACAGC	NA	NA	NA	NA	NA	NA	NA	NA	24069695	24084619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24070021_24074096_24074193_24076707_24077130_24078558_24078695_24081076_24081188_24081586_24081706_24081896_24081967_24083433_24083608_24084146
ENSMUSG00000054362.10_0	chr4	-	1568	10	FSM	ENSMUSG00000054362.10	ENST00000371273.4	1584	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATGGAAGAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106474480	106448551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106448885_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098_106473187_106474321
ENSMUSG00000054362.10_1	chr4	-	1661	10	FSM	ENSMUSG00000054362.10	ENST00000358193.7	1681	10	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGATGGAAGAGGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	106474476	106448551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_106448982_106464485_106464620_106467596_106467716_106468603_106468772_106470305_106470450_106470564_106470700_106472231_106472355_106472535_106472701_106473098_106473187_106474321
ENSMUSG00000054364.6_0	chr12	-	2329	1	FSM	ENSMUSG00000054364.6	ENSMUST00000067384.6	2349	1	9	11	9	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	671	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAAACAGCTCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8550000	8547671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_8547700_8550000
ENSMUSG00000054381.6_0	chr7	-	2664	3	FSM	ENSMUSG00000054381.6	ENSMUST00000067425.6	2684	3	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAACCTCATAAATG	NA	NA	NA	NA	NA	NA	NA	NA	126975215	126971721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126973871_126974560_126974675_126974814
ENSMUSG00000054387.14_1	chr1	-	1579	11	FSM	ENSMUSG00000054387.14	ENST00000367182.8	1595	11	8	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132953071	132919402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932460_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_26	chr1	-	432	5	FSM	ENSMUSG00000054387.14	ENST00000507825.3	445	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAAGCTTTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	132946586	132931533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514
ENSMUSG00000054387.14_27	chr1	-	363	4	ISM	ENSMUSG00000054387.14	ENST00000507825.3	445	5	6140	7	6140	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGGTAAGCTTTGGATCA	NA	NA	NA	NA	NA	NA	NA	NA	132940452	132931533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_132931629_132936874_132936931_132938802_132938937_132940374
ENSMUSG00000054387.14_5	chr1	-	933	5	FSM	ENSMUSG00000054387.14	ENST00000612738.4	954	5	13	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132953091	132919402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132919964_132922240_132922322_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_6	chr1	-	1129	7	FSM	ENSMUSG00000054387.14	ENST00000616250.4	1144	7	7	8	-3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132953097	132919402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132919964_132922240_132922322_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_8	chr1	-	1534	10	FSM	ENSMUSG00000054387.14	ENST00000391947.6	1552	10	10	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132953094	132919402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132936874_132936931_132938802_132938937_132940374_132940450_132946514_132946623_132952983
ENSMUSG00000054387.14_9	chr1	-	1307	8	FSM	ENSMUSG00000054387.14	ENST00000614459.4	1326	8	11	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCATAGTTGAGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	132953093	132919402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132919964_132922240_132922322_132924300_132924448_132929020_132929182_132931528_132931629_132932391_132932431_132946514_132946623_132952983
ENSMUSG00000054400.17_0	chr8	+	644	4	FSM	ENSMUSG00000054400.17	ENSMUST00000034342.13	667	4	14	9	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCCATATATTTTCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	104977506	104990070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_104977728_104983916_104984076_104988105_104988202_104989902
ENSMUSG00000054400.17_1	chr8	+	1768	3	FSM	ENSMUSG00000054400.17	ENSMUST00000098464.6	1804	3	6	30	6	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAAAAACCAAACA	NA	NA	NA	NA	NA	NA	NA	NA	104977567	104991540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_104977728_104983916_104984076_104990091
ENSMUSG00000054404.14_0	chr11	+	5952	6	FSM	ENSMUSG00000054404.14	ENSMUST00000067443.10	5979	6	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAGGACATAAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	82842938	82855650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82843022_82845542_82845609_82847088_82848117_82849502_82849629_82850830_82851555_82851725
ENSMUSG00000054404.14_1	chr11	+	5873	5	FSM	ENSMUSG00000054404.14	ENSMUST00000108157.2	3007	5	55	-2921	55	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGACATAAGATATTGC	NA	NA	NA	NA	NA	NA	NA	NA	82845541	82855653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82845609_82847088_82848117_82849502_82849629_82850830_82851555_82851725
ENSMUSG00000054405.15_0	chr4	+	1383	9	FSM	ENSMUSG00000054405.15	ENSMUST00000094657.10	1401	9	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	2195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTTGATGGTCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	132262871	132281046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132262975_132265497_132265600_132269092_132269150_132271366_132271434_132271967_132272063_132273947_132274020_132277687_132277780_132278845_132278922_132280327
ENSMUSG00000054408.10_0	chr8	-	3452	5	FSM	ENSMUSG00000054408.10	ENSMUST00000067476.9	3466	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGACTTCCAGGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	54983025	54973473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_54976431_54977975_54978092_54979485_54979563_54981376_54981451_54982797
ENSMUSG00000054414.5_0	chr3	-	9006	11	FSM	ENSMUSG00000054414.5	ENSMUST00000067485.4	9020	11	7	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTCCTGAGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	115801048	115732628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ENSMUSG00000054414.5_4	chr3	-	1641	12	FSM	ENSMUSG00000054414.5	ENST00000370112.8	1648	12	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATGGGTATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	115801038	115739713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115740005_115740274_115740361_115747700_115747851_115750519_115750611_115772292_115772429_115775410_115775462_115778473_115778624_115783660_115783788_115784375_115784464_115786574_115786689_115800482_115800585_115800783
ENSMUSG00000054418.7_0	chr11	+	1756	2	FSM	ENSMUSG00000054418.7	ENSMUST00000155384.2	1784	2	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGTTGTGACCAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	117502100	117504683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117502261_117503087
ENSMUSG00000054423.15_0	chr14	+	5427	28	FSM	ENSMUSG00000054423.15	ENST00000612439.4	5445	28	12	6	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTGTGTGTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9646675	10097198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960668_9963791_9963980_9966354_9966514_9977899_9978002_9980222_9980287_9980658_9980783_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10093053_10093159_10095969
ENSMUSG00000054423.15_22	chr14	+	5168	27	FSM	ENSMUSG00000054423.15	ENST00000357948.7	5183	27	10	5	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATGTGTGTGTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	9646724	10097198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960617_9963791_9963980_9977899_9978002_9980222_9980287_9980658_9980783_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10093053_10093159_10095969
ENSMUSG00000054423.15_37	chr14	+	4538	28	FSM	ENSMUSG00000054423.15	ENST00000283269.13	4561	28	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATTAATTTAAGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	9646823	10096547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872394_9918849_9918962_9923339_9923480_9933375_9933443_9941181_9941291_9947347_9947561_9960530_9960668_9963791_9963980_9977899_9978002_9980222_9980287_9980658_9980783_9983169_9983239_9996247_9996355_10002583_10002741_10003762_10003905_10015443_10015600_10019893_10020042_10028847_10028923_10029808_10029893_10051725_10051759_10058101_10058210_10093053_10093159_10095969
ENSMUSG00000054423.15_65	chr14	+	1703	7	FSM	ENSMUSG00000054423.15	ENST00000490353.2	1712	7	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATCAAATGATCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	9647033	9890984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_9647460_9754367_9754482_9763918_9764252_9853616_9853698_9865907_9866142_9872271_9872466_9890663
ENSMUSG00000054426.12_0	chr3	-	621	2	FSM	ENSMUSG00000054426.12	ENSMUST00000185681.2	625	2	2	2	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGCCTTGGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	115681777	115675231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115675488_115681412
ENSMUSG00000054426.12_1	chr3	-	737	3	FSM	ENSMUSG00000054426.12	ENSMUST00000188260.7	739	3	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATTGCCTTGGCTATGG	NA	NA	NA	NA	NA	NA	NA	NA	115681743	115675231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_115675488_115679862_115680025_115681424
ENSMUSG00000054428.13_0	chr4	-	523	3	FSM	ENSMUSG00000054428.13	ENSMUST00000067496.7	539	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4044	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGCCTGATGCCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	132260961	132257872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132258135_132260606_132260699_132260792
ENSMUSG00000054434.15_0	chr5	+	2151	12	FSM	ENSMUSG00000054434.15	ENSMUST00000067505.15	2164	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTCTGTCCCTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	123214345	123255807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123214559_123236237_123236357_123237899_123238017_123239687_123239748_123240316_123240413_123242484_123242575_123252164_123252231_123252630_123252693_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_4	chr5	+	857	5	FSM	ENSMUSG00000054434.15	ENST00000540377.1	868	5	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTACTGTGTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	123242488	123255250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123242575_123253162_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054434.15_6	chr5	+	774	4	ISM	ENSMUSG00000054434.15	ENST00000540377.1	868	5	10678	4	10678	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTACTGTGTCCCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	123253159	123255250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_123253256_123253723_123253789_123254264_123254334_123254706
ENSMUSG00000054446.9_0	chr6	+	1571	10	FSM	ENSMUSG00000054446.9	ENSMUST00000031806.10	1583	10	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTAGGGTTTTGGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	30639220	30645354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30639528_30639980_30640063_30640506_30640741_30640891_30640994_30641490_30641593_30641762_30641874_30642296_30642388_30642860_30643061_30643542_30643628_30645097
ENSMUSG00000054452.11_0	chr10	+	1390	7	FSM	ENSMUSG00000054452.11	ENSMUST00000002518.9	1411	7	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTGGCCACTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	81395339	81402187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81395503_81397052_81397151_81399928_81399993_81400506_81400552_81400681_81400745_81401125_81401201_81401305
ENSMUSG00000054453.12_0	chrX	+	2676	17	FSM	ENSMUSG00000054453.12	ENST00000297875.7	2681	17	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTACATCTCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	9728332	9860797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_9728436_9751537_9752019_9771756_9771967_9780141_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789_9854926_9859127_9859337_9860639
ENSMUSG00000054453.12_14	chrX	+	2575	16	FSM	ENSMUSG00000054453.12	ENSMUST00000086165.4	2235	16	-325	-15	-325	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAACTACATCTCTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	9751535	9860797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_9752019_9771756_9771967_9780141_9780258_9781744_9781854_9798971_9799107_9809278_9809421_9815050_9815181_9817816_9817924_9822597_9822688_9826252_9826432_9827971_9828072_9829829_9829992_9853034_9853144_9854789_9854926_9859127_9859337_9860639
ENSMUSG00000054455.6_0	chr2	+	7015	6	FSM	ENSMUSG00000054455.6	ENSMUST00000067530.6	7032	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAAATAATGATTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	173579312	173626124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173579544_173603909_173604063_173613313_173613418_173616186_173616268_173617904_173618082_173619855
ENSMUSG00000054455.6_1	chr2	+	1501	3	FSM	ENSMUSG00000054455.6	ENST00000395802.7	1512	3	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAGAGTCCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	173579481	173621141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_173579544_173603909_173604063_173619855
ENSMUSG00000054455.6_3	chr2	+	1436	2	ISM	ENSMUSG00000054455.6	ENST00000395802.7	1512	3	24433	9	24433	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAAGAGTCCTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	173603912	173621141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_173604063_173619855
ENSMUSG00000054469.15_0	chr17	+	4451	6	FSM	ENSMUSG00000054469.15	ENSMUST00000067545.8	4467	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAAGCTGTTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	73414997	73550356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73415173_73468817_73468987_73476490_73476690_73494869_73495017_73503673_73503791_73546712
ENSMUSG00000054474.16_1	chr6	-	874	5	FSM	ENSMUSG00000054474.16	ENST00000449349.5	884	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCGGTGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	71118318	71105656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71105837_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054474.16_2	chr6	-	1257	7	FSM	ENSMUSG00000054474.16	ENST00000496844.6	1267	7	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCGGTGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	71118426	71105656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71105837_71108631_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054474.16_5	chr6	-	1383	7	FSM	ENSMUSG00000054474.16	ENST00000343544.8	1390	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGCGGTGGAAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	71118429	71105656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71105837_71108508_71108758_71108858_71109008_71111064_71111296_71115634_71115788_71116732_71116928_71118203
ENSMUSG00000054477.17_0	chr18	+	2064	7	FSM	ENSMUSG00000054477.17	ENST00000610748.4	2074	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACATTTGTTTGGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	45692782	45818949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_45693692_45694287_45694384_45788264_45788407_45803284_45803396_45810003_45810132_45816137_45816208_45818341
ENSMUSG00000054484.15_0	chr2	+	2894	14	FSM	ENSMUSG00000054484.15	ENSMUST00000067582.14	2921	14	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATATCACAAACGGA	NA	NA	NA	NA	NA	NA	NA	NA	120807508	120838317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120807960_120808179_120808292_120809611_120809750_120810953_120811000_120814814_120814957_120817063_120817189_120817316_120817440_120820811_120820968_120823958_120824119_120826886_120827001_120829554_120829640_120832977_120833083_120835162_120835282_120837299
ENSMUSG00000054499.10_0	chr7	-	1826	5	FSM	ENSMUSG00000054499.10	ENSMUST00000058702.7	1828	5	0	2	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCAGGCTCTCCGGTA	NA	NA	NA	NA	NA	NA	NA	NA	24919284	24902266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188
ENSMUSG00000054499.10_1	chr7	-	1934	6	FSM	ENSMUSG00000054499.10	ENSMUST00000205271.2	1942	6	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTGGGCGTCCAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	24920040	24902273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24903357_24910573_24910724_24916969_24917093_24918225_24918593_24919188_24919353_24919993
ENSMUSG00000054509.8_0	chr14	+	6374	35	FSM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTAATACTAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	56813079	56897242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56813188_56821615_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56886407_56889704_56889805_56892938_56893072_56896694
ENSMUSG00000054509.8_3	chr14	+	6269	34	ISM	ENSMUSG00000054509.8	ENSMUST00000161553.2	6387	35	8537	9	8537	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACTAATACTAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	56821612	56897242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_56821749_56823013_56823210_56825205_56825270_56825875_56825952_56827335_56827438_56827820_56827971_56829747_56829886_56830680_56830855_56832710_56832872_56835032_56835171_56835788_56835885_56839720_56839905_56840207_56840365_56844878_56845004_56845817_56845950_56848210_56848298_56851110_56851276_56851856_56851904_56852143_56852223_56853788_56853927_56857910_56858107_56859640_56859709_56861473_56861662_56864846_56864947_56866530_56866702_56866923_56867005_56871668_56871750_56873183_56873280_56875304_56875428_56878711_56878775_56884630_56886407_56889704_56889805_56892938_56893072_56896694
ENSMUSG00000054514.4_0	chr4	+	945	2	FSM	ENSMUSG00000054514.4	ENSMUST00000067628.2	971	2	16	10	-13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAAGGTATGTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	155845664	155846707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155845744_155845841
ENSMUSG00000054517.10_0	chr11	-	3010	6	FSM	ENSMUSG00000054517.10	ENSMUST00000067632.4	3048	6	31	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAATGATTAAGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	116021921	116015540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116017467_116017987_116018054_116018263_116018442_116018523_116018758_116019021_116019118_116021411
ENSMUSG00000054519.9_0	chr11	-	3396	4	FSM	ENSMUSG00000054519.9	ENSMUST00000057799.8	3412	4	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAAGAAGAAGAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	59363295	59352033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59355113_59355837_59355899_59356276_59356404_59363166
ENSMUSG00000054520.16_0	chr5	+	2878	13	FSM	ENSMUSG00000054520.16	ENSMUST00000067638.14	2885	13	0	7	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATATGAGTGTCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	34683189	34720978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34683246_34708904_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34718946_34719007_34719702
ENSMUSG00000054520.16_3	chr5	+	2814	12	ISM	ENSMUSG00000054520.16	ENSMUST00000179943.3	2935	13	1881	4	1881	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCATATGAGTGTCTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	34708912	34720978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_34709045_34710080_34710184_34712800_34712919_34713285_34713357_34714234_34714324_34714638_34714708_34716344_34716994_34717687_34717797_34718032_34718089_34718369_34718452_34718946_34719007_34719702
ENSMUSG00000054545.18_1	chr1	+	3285	6	FSM	ENSMUSG00000054545.18	ENSMUST00000113134.8	2297	6	10	-998	10	998	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGCAATTAAAAAAAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	88062540	88147717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_88062658_88066194_88067054_88142765_88142898_88143516_88143605_88143859_88144080_88145848
ENSMUSG00000054555.12_0	chr7	-	7655	23	FSM	ENSMUSG00000054555.12	ENSMUST00000067680.11	7675	23	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAACAGATAAAGTTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	133826819	133484940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_133489726_133491902_133492034_133509232_133509407_133510822_133510932_133511555_133511692_133514544_133514654_133518140_133518219_133521232_133521432_133521535_133521645_133531621_133531818_133533460_133533551_133539150_133539329_133562812_133562962_133566449_133566535_133569559_133569730_133576064_133576137_133577191_133577258_133583132_133583320_133599886_133599964_133614005_133614085_133736447_133736522_133774511_133774610_133826515
ENSMUSG00000054580.15_0	chr2	-	7046	30	FSM	ENSMUSG00000054580.15	ENSMUST00000112525.5	7112	30	47	19	47	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTAACAAAATAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	60383605	60247905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60250647_60250751_60250785_60252948_60253126_60254602_60254720_60255695_60255837_60257970_60258140_60258849_60259089_60262297_60262446_60262887_60263019_60263676_60263795_60271429_60271567_60273620_60273725_60274474_60274540_60277726_60277885_60278600_60278637_60279177_60279311_60282745_60282831_60285429_60285576_60288593_60288797_60309747_60309912_60325598_60325712_60327903_60328003_60332382_60332541_60334470_60334666_60345249_60345391_60345930_60346045_60353109_60353284_60360710_60360885_60365066_60365448_60383353
ENSMUSG00000054582.5_0	chr2	+	1714	13	ISM	ENSMUSG00000054582.5	ENSMUST00000067715.5	2354	14	70	922	8	-8	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAAGGCAGGTGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	163867439	163891536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_163867594_163869394_163869589_163873118_163873235_163874099_163874240_163874407_163874503_163877164_163877303_163879030_163879127_163884236_163884486_163885469_163885561_163886183_163886301_163887782_163887890_163889400_163889495_163891413
ENSMUSG00000054589.2_0	chr18	+	952	2	FSM	ENSMUSG00000054589.2	ENSMUST00000067743.2	962	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAATTATCTGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	62313196	62317466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_62313675_62316992
ENSMUSG00000054604.8_0	chr16	+	4410	3	FSM	ENSMUSG00000054604.8	ENSMUST00000067744.8	4425	3	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCATATTTTGTTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64672370	64679867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_64672600_64673161_64673389_64675913
ENSMUSG00000054604.8_1	chr16	+	3854	2	FSM	ENSMUSG00000054604.8	ENST00000398392.2	3872	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAAGTTTTTGAAATC	NA	NA	NA	NA	NA	NA	NA	NA	64675844	64679852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_64677819_64677972
ENSMUSG00000054611.18_1	chr19	-	8554	21	FSM	ENSMUSG00000054611.18	ENSMUST00000047898.14	8578	21	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACCAGCCCCTGATTTC	NA	NA	NA	NA	NA	NA	NA	NA	4448296	4364453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4447961
ENSMUSG00000054611.18_2	chr19	-	7231	21	FSM	ENSMUSG00000054611.18	ENSMUST00000075856.11	7242	21	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGACTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4447094	4366197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4369310_4370179_4370396_4370925_4371085_4372414_4372579_4374364_4375075_4376836_4376927_4378155_4378288_4378980_4379251_4381213_4381298_4392874_4393270_4395545_4395673_4398673_4398790_4400204_4400359_4401764_4401859_4402295_4402403_4406775_4406955_4411565_4411613_4412004_4412084_4412803_4412943_4444819_4444921_4446338
ENSMUSG00000054619.8_0	chr15	+	1933	2	FSM	ENSMUSG00000054619.8	ENSMUST00000067752.5	1946	2	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCCTGCTTGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	100202646	100212228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_100203226_100210874
ENSMUSG00000054626.12_3	chrX	-	934	7	ISM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	1449	12	1449	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTAATAAATATGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	52798214	52785726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109
ENSMUSG00000054626.12_4	chrX	-	1020	8	FSM	ENSMUSG00000054626.12	ENSMUST00000067763.10	1032	8	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAATAAATATGTGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	52799661	52785724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798236_52799598
ENSMUSG00000054626.12_5	chrX	-	975	8	FSM	ENSMUSG00000054626.12	ENSMUST00000114810.2	984	8	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGAGTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	52799661	52785721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52786140_52786458_52786558_52789056_52789157_52789849_52789968_52797434_52797470_52797739_52797804_52798109_52798188_52799598
ENSMUSG00000054648.9_0	chr8	-	6060	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238292.2	6080	5	13	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTATTCATGCCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	70169474	70155312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70168933
ENSMUSG00000054648.9_1	chr8	-	3167	5	FSM	ENSMUSG00000054648.9	ENSMUST00000238418.2	3180	5	10	3	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTTGTCAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70169542	70157789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70169417
ENSMUSG00000054648.9_2	chr8	-	3771	7	FSM	ENSMUSG00000054648.9	ENSMUST00000238657.2	3783	7	9	3	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTTGTCAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70169465	70157789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70165926_70166016_70166951_70167060_70168933
ENSMUSG00000054648.9_3	chr8	-	3194	6	FSM	ENSMUSG00000054648.9	ENSMUST00000238753.2	3199	6	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTTGTCAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	70169593	70157789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70160345_70160760_70160822_70160988_70161116_70163335_70163635_70166951_70167060_70169549
ENSMUSG00000054662.9_0	chr7	-	1338	12	FSM	ENSMUSG00000054662.9	ENST00000332826.7	1353	12	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGAATCGGACCTTCACAG	NA	NA	NA	NA	NA	NA	NA	NA	140688289	140683023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140683148_140683904_140684058_140684154_140684298_140684395_140684494_140684581_140684640_140686675_140686813_140687079_140687233_140687308_140687414_140687513_140687597_140687709_140687771_140687958_140688056_140688163
ENSMUSG00000054666.8_0	chr17	+	6996	2	FSM	ENSMUSG00000054666.8	ENSMUST00000217023.3	7023	2	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGAGAACCATCTTAATC	NA	NA	NA	NA	NA	NA	NA	NA	33483669	33494611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33483743_33487688
ENSMUSG00000054666.8_1	chr17	+	6928	1	FSM	ENSMUSG00000054666.8	ENSMUST00000067840.7	955	1	-10	-5963	-10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAACCATCTTAATCGT	NA	NA	NA	NA	NA	NA	NA	NA	33487685	33494613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33487700_33494600
ENSMUSG00000054675.6_0	chr5	-	2230	2	FSM	ENSMUSG00000054675.6	ENSMUST00000067853.6	2242	2	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2549	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCTCTGGATTATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	113938566	113931790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_113933815_113938360
ENSMUSG00000054676.18_0	chr7	+	3327	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178207.10	3340	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCACTCTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	37882649	37896987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_37882947_37888030_37888202_37894128
ENSMUSG00000054676.18_1	chr7	+	2303	3	FSM	ENSMUSG00000054676.18	ENSMUST00000179525.10	2325	3	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTATGTATTTCATATC	NA	NA	NA	NA	NA	NA	NA	NA	37882700	37896009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_37882952_37888030_37888202_37894128
ENSMUSG00000054676.18_2	chr7	+	3267	3	FSM	ENSMUSG00000054676.18	ENSMUST00000178876.10	3282	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCACTCTCTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	37883087	37896987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_37883325_37888030_37888202_37894128
ENSMUSG00000054693.15_0	chr9	+	4577	16	FSM	ENSMUSG00000054693.15	ENSMUST00000067880.13	4593	16	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATCAACTTGAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	70586284	70687501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70586542_70610568_70610720_70625939_70626059_70629894_70630054_70647356_70647458_70651132_70651286_70653515_70653609_70655364_70655549_70661443_70661608_70668864_70669049_70673233_70673385_70674153_70674338_70675090_70675200_70676073_70676295_70683654_70683782_70685281
ENSMUSG00000054693.15_4	chr9	+	530	2	FSM	ENSMUSG00000054693.15	ENST00000561288.1	549	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGCCAATCAAGGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	70586358	70685750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70586542_70685403
ENSMUSG00000054693.15_5	chr9	+	1285	2	FSM	ENSMUSG00000054693.15	ENST00000461408.2	1304	2	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAATAAAATCTAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	70586355	70587945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_70586542_70586846
ENSMUSG00000054702.15_0	chr1	-	442	3	FSM	ENSMUSG00000054702.15	ENST00000396653.2	451	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCCTGGGGTAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	79649676	79591906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_79592058_79602821_79603003_79649566
ENSMUSG00000054708.18_0	chr10	+	3537	19	ISM	ENSMUSG00000054708.18	ENSMUST00000119336.8	3561	20	918	14	918	-14	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTAAAGAAACCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	81465386	81483430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_81465583_81470698_81470830_81470903_81470993_81471521_81471587_81472202_81472261_81473902_81473974_81474104_81474212_81474394_81474583_81475140_81475179_81475689_81475771_81475861_81475970_81476601_81476647_81476725_81476825_81477809_81477883_81478134_81478254_81478350_81479728_81482138_81482268_81482626_81482693_81482933
ENSMUSG00000054715.12_0	chr7	+	2965	2	FSM	ENSMUSG00000054715.12	ENSMUST00000117189.2	2995	2	25	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCAATTGGGCTTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	12631787	12643005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12631908_12640160
ENSMUSG00000054716.5_0	chr7	+	1473	3	FSM	ENSMUSG00000054716.5	ENSMUST00000052509.6	1484	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCACGATGCCTGTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	126843454	126853973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126843781_126844156_126844307_126852976
ENSMUSG00000054716.5_1	chr7	+	1106	3	FSM	ENSMUSG00000054716.5	ENST00000434417.1	1121	3	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCACTTGGGACTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	126843667	126853806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126843781_126844143_126844307_126852976
ENSMUSG00000054717.8_0	chr8	+	2616	5	FSM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTAAGGATGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57964946	57969027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_57965040_57965608_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUSG00000054717.8_3	chr8	+	2527	4	ISM	ENSMUSG00000054717.8	ENSMUST00000067925.8	2628	5	664	6	664	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTTAAGGATGTTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	57965604	57969027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_57965783_57966095_57966242_57966323_57966499_57966999
ENSMUSG00000054720.13_0	chr5	+	6964	4	FSM	ENSMUSG00000054720.13	ENSMUST00000067924.13	6976	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATATCTTTGGGACCCAT	NA	NA	NA	NA	NA	NA	NA	NA	105667259	105760878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_105667497_105692065_105692137_105727333_105727476_105754364
ENSMUSG00000054723.7_0	chr17	-	2219	2	FSM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57023972	57020937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57022818_57023633
ENSMUSG00000054723.7_1	chr17	-	1951	2	FSM	ENSMUSG00000054723.7	ENSMUST00000164907.3	1965	2	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57024668	57020937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57022818_57024597
ENSMUSG00000054723.7_2	chr17	-	1874	1	ISM	ENSMUSG00000054723.7	ENSMUST00000067931.7	2226	2	1166	2	1166	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGGACTCTACCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57022811	57020937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_57020900_57022800
ENSMUSG00000054728.18_0	chr13	+	2227	12	FSM	ENSMUSG00000054728.18	ENST00000676234.1	2263	12	22	14	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAGAGAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	43019812	43288780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43020432_43110092_43110258_43190925_43191007_43210654_43210823_43231130_43231453_43248224_43248473_43250125_43250283_43276474_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
ENSMUSG00000054728.18_1	chr13	+	2138	13	FSM	ENSMUSG00000054728.18	ENST00000675203.1	2162	13	10	14	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAGAGAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	43070020	43288780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43070344_43110092_43110258_43190925_43191007_43210654_43210823_43213046_43213254_43231130_43231453_43248224_43248473_43250125_43250283_43276474_43276531_43281613_43281676_43286395_43286537_43287402_43287480_43288649
ENSMUSG00000054733.10_0	chr14	-	1856	11	FSM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	0	4	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCAACCGCCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64693352	64360077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158_64678476_64688412_64688488_64689845_64689925_64690910_64691013_64692207_64692343_64693330
ENSMUSG00000054733.10_1	chr14	-	1824	10	ISM	ENSMUSG00000054733.10	ENSMUST00000067927.9	1860	11	1020	4	1020	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGCAACCGCCTGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	64692332	64360077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64678158_64678476_64688412_64688488_64689845_64689925_64690910_64691013_64692207
ENSMUSG00000054733.10_5	chr14	-	454	4	FSM	ENSMUSG00000054733.10	ENST00000441698.6	458	4	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTCCCTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	64551203	64360628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64551135
ENSMUSG00000054733.10_6	chr14	-	385	3	ISM	ENSMUSG00000054733.10	ENST00000441698.6	458	4	79824	2	79824	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTCCCTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	64471381	64360628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_64360803_64447876_64447984_64471277
ENSMUSG00000054733.10_7	chr14	-	1153	7	FSM	ENSMUSG00000054733.10	ENST00000528246.5	1169	7	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAAGCTGTCCCTGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	64655324	64360628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_64360803_64447876_64447984_64471277_64471383_64522512_64522633_64551135_64551205_64654530_64654605_64654820
ENSMUSG00000054737.12_0	chrX	-	3103	5	FSM	ENSMUSG00000054737.12	ENSMUST00000115333.9	3130	5	16	11	-1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAACCATATTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	20928226	20895188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20897892_20902575_20902711_20902866_20903012_20926741_20926768_20928132
ENSMUSG00000054752.17_0	chr4	+	7467	13	FSM	ENSMUSG00000054752.17	ENSMUST00000132151.8	7467	13	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCATTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	53631470	53707009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_53631613_53646986_53647083_53647669_53647802_53649791_53649894_53655740_53655764_53659512_53659635_53679793_53680004_53682099_53682199_53686387_53686518_53693983_53694085_53694607_53694860_53696889_53696979_53701040
ENSMUSG00000054753.10_0	chr7	-	3433	12	FSM	ENSMUSG00000054753.10	ENSMUST00000171749.3	3449	12	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATATGACTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	3219019	3204503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3205949_3206105_3206215_3207744_3207912_3208057_3208270_3208394_3208498_3208594_3208735_3208891_3209115_3209268_3209382_3211070_3211249_3212041_3212201_3213722_3214128_3218840
ENSMUSG00000054766.14_0	chr2	+	2814	8	FSM	ENSMUSG00000054766.14	ENSMUST00000102866.10	2824	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	29951873	29962588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29952293_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_10	chr2	+	734	6	ISM	ENSMUSG00000054766.14	ENST00000372688.8	790	7	1109	11	2	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGGAGAGGTACACCC	NA	NA	NA	NA	NA	NA	NA	NA	29958285	29960601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ENSMUSG00000054766.14_11	chr2	+	476	5	FSM	ENSMUSG00000054766.14	ENST00000479329.1	477	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTACTGACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	29958283	29960274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29958339_29958989_29959115_29959338_29959443_29959529_29959644_29960196
ENSMUSG00000054766.14_14	chr2	+	417	4	ISM	ENSMUSG00000054766.14	ENST00000479329.1	477	5	710	1	710	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGTTTACTGACCATTC	NA	NA	NA	NA	NA	NA	NA	NA	29958993	29960274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_29959115_29959338_29959443_29959529_29959644_29960196
ENSMUSG00000054766.14_4	chr2	+	2824	8	FSM	ENSMUSG00000054766.14	ENSMUST00000067996.7	2834	8	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGGGTCATTCTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	29956476	29962588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29956906_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452_29960600_29960930
ENSMUSG00000054766.14_7	chr2	+	779	7	FSM	ENSMUSG00000054766.14	ENST00000372688.8	790	7	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGGAGAGGTACACCC	NA	NA	NA	NA	NA	NA	NA	NA	29957176	29960601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29957217_29958280_29958339_29958971_29959115_29959338_29959443_29959529_29959644_29960196_29960368_29960452
ENSMUSG00000054770.17_0	chr1	-	2496	7	FSM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAATGTGACTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	58009283	57994418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655_58006883_58009179
ENSMUSG00000054770.17_3	chr1	-	2397	6	ISM	ENSMUSG00000054770.17	ENSMUST00000114410.10	2512	7	2402	10	2358	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTGACTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	58006885	57994416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_57995980_57998301_57998405_58001059_58001155_58002226_58002421_58004487_58004700_58006655
ENSMUSG00000054792.16_0	chr9	-	4519	10	FSM	ENSMUSG00000054792.16	ENSMUST00000068025.13	4530	10	7	4	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTTGCAGTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	110305755	110254997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265302_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ENSMUSG00000054792.16_2	chr9	-	4524	10	FSM	ENSMUSG00000054792.16	ENSMUST00000198164.5	4538	10	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCCTAATATTCTTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	110305751	110255003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110258086_110259013_110259126_110261501_110261607_110265078_110265317_110266414_110266552_110267965_110268127_110275741_110275941_110279787_110279929_110284424_110284556_110305533
ENSMUSG00000054808.16_0	chr7	-	3860	21	FSM	ENSMUSG00000054808.16	ENSMUST00000068045.14	3877	21	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAGGACTCTGGTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	28661756	28592680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054808.16_20	chr7	-	3499	22	FSM	ENSMUSG00000054808.16	ENSMUST00000217157.2	3530	22	12	19	12	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAAAAAAATCATT	NA	NA	NA	NA	NA	NA	NA	NA	28661753	28593098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28593813_28593925_28594085_28594545_28594606_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28610914_28611001_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054808.16_23	chr7	-	2896	21	FSM	ENSMUSG00000054808.16	ENST00000424234.7	2915	21	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAAAGAGCTCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	28661683	28593571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28593813_28593925_28594085_28594856_28594938_28595513_28595661_28596300_28596481_28597273_28597409_28597493_28597677_28597763_28597905_28598044_28598154_28601301_28601453_28603965_28604114_28604649_28604881_28606396_28606490_28609327_28609414_28611664_28611747_28612802_28612882_28614637_28614726_28615584_28615672_28618096_28618217_28618378_28618494_28661443
ENSMUSG00000054814.15_0	chr5	-	4719	8	FSM	ENSMUSG00000054814.15	ENSMUST00000119154.8	4738	8	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGAAGTCATTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	74229075	74159126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74228910
ENSMUSG00000054814.15_2	chr5	-	4541	9	FSM	ENSMUSG00000054814.15	ENSMUST00000068058.14	4557	9	6	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTAATTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74229086	74159396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_74162799_74163345_74163425_74163815_74164014_74166484_74166569_74177320_74177398_74189801_74190032_74192964_74193179_74197693_74197775_74228910
ENSMUSG00000054823.18_0	chr8	+	6890	23	FSM	ENSMUSG00000054823.18	ENST00000317025.13	6914	23	21	3	21	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCATGTATTTATAAATACC	NA	NA	NA	NA	NA	NA	NA	NA	26092277	26206467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163473_26168717_26168863_26169881_26170011_26170663_26170791_26172514_26172713_26173167_26173339_26181041_26181189_26184715_26184873_26188760_26188964_26189938_26190052_26190478_26190749_26196551_26196669_26199089_26199232_26200699_26200807_26203384_26203587_26204185
ENSMUSG00000054823.18_12	chr8	+	3791	8	FSM	ENSMUSG00000054823.18	ENSMUST00000136107.9	3818	8	20	7	-15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAATCCTTACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	26092319	26164925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349
ENSMUSG00000054823.18_13	chr8	+	3634	10	FSM	ENSMUSG00000054823.18	ENSMUST00000146919.8	3652	10	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTCTTCTCTGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26092310	26167981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_26092753_26130592_26131342_26138456_26138529_26139556_26139720_26149756_26149912_26152756_26153273_26156045_26156173_26163349_26163451_26165712_26165759_26166718
ENSMUSG00000054836.13_0	chr9	+	1289	7	FSM	ENSMUSG00000054836.13	ENSMUST00000199592.5	1304	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGCTTCCTGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	110134249	110150385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110134418_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054836.13_5	chr9	+	2174	8	FSM	ENSMUSG00000054836.13	ENSMUST00000068071.12	2219	8	30	15	30	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTAAAAATTTTATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	110134301	110151155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_110134418_110138103_110138271_110139162_110139242_110141636_110141708_110143043_110143163_110144818_110145021_110148637_110148785_110149882
ENSMUSG00000054843.10_0	chr19	+	6560	29	FSM	ENSMUSG00000054843.10	ENSMUST00000077282.7	6586	29	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGAACCAAAAACCACCT	NA	NA	NA	NA	NA	NA	NA	NA	57599477	58121761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57641354_57641443_57643202_57643459_57645486_57645671_57661550_57661706_57670802_57670888_57673935_57674145_57675090_57675210_57680198_57680332_57684605_57684788_57687948_57688163_57690419_57690609_57695346_57695566_57703017_57703156_57719983_57720078_57728611_57728665_57740061_57740157_57741656_57741736_57743892_57744051_57766315_57766378_57785856_57785936_57924028_57924137_58030759_58030875_58119524
ENSMUSG00000054843.10_2	chr19	+	1540	7	FSM	ENSMUSG00000054843.10	ENST00000527407.5	1552	7	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGTTGGGAGCATCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	57599531	57643487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_57600076_57617516_57617601_57618657_57618772_57626883_57627013_57630851_57631061_57638689_57638865_57643202
ENSMUSG00000054855.14_0	chr15	-	1020	5	FSM	ENSMUSG00000054855.14	ENSMUST00000109149.9	1034	5	13	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAAGGGGGGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	98575328	98561302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98561772_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ENSMUSG00000054855.14_1	chr15	-	2189	5	FSM	ENSMUSG00000054855.14	ENSMUST00000003451.11	2203	5	11	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACTAGGAGCAGCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	98575331	98567088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98568724_98570391_98570527_98571726_98571837_98574367_98574456_98575110
ENSMUSG00000054863.10_0	chr15	+	2634	4	FSM	ENSMUSG00000054863.10	ENSMUST00000230414.2	2649	4	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCATGGCTTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	87428512	87643561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_87428805_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054863.10_3	chr15	+	2588	4	FSM	ENSMUSG00000054863.10	ENSMUST00000068088.8	2603	4	11	4	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATCATGGCTTTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	87509441	87643561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_87509688_87565680_87565831_87604702_87604831_87641497
ENSMUSG00000054871.6_0	chr9	-	1699	1	FSM	ENSMUSG00000054871.6	ENSMUST00000068140.6	1712	1	8	5	8	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGTATGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	123089821	123088122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123088100_123089800
ENSMUSG00000054874.13_0	chr19	-	7233	35	FSM	ENSMUSG00000054874.13	ENSMUST00000113615.9	7264	35	25	6	25	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGCAGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	5738911	5714668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5735119_5736248_5736458_5736555_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ENSMUSG00000054874.13_2	chr19	-	5275	33	FSM	ENSMUSG00000054874.13	ENSMUST00000068169.12	5276	33	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGTTGGCAGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	5738177	5714668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5715276_5715356_5715656_5715735_5715870_5716177_5716453_5716536_5716768_5716862_5717011_5717176_5717281_5717406_5717638_5721550_5721805_5722474_5722691_5722785_5722845_5723252_5723383_5723507_5723617_5724904_5725083_5725387_5725533_5727152_5727304_5727433_5727527_5727647_5727754_5728670_5728781_5728939_5729032_5729387_5729499_5729597_5729770_5729995_5730029_5730270_5730425_5731459_5731582_5733304_5733441_5733815_5733907_5734317_5734497_5734576_5734701_5736654_5736695_5737146_5737247_5737478_5737667_5738024
ENSMUSG00000054893.16_0	chr7	+	3660	5	FSM	ENSMUSG00000054893.16	ENSMUST00000086327.12	3672	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGCCCAACTGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	6289583	6310876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6307586
ENSMUSG00000054893.16_1	chr7	+	584	5	FSM	ENSMUSG00000054893.16	ENSMUST00000153840.2	596	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCAGGGGCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6289594	6303949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6289654_6292356_6292437_6293534_6293662_6296847_6296941_6303724
ENSMUSG00000054893.16_3	chr7	+	524	4	ISM	ENSMUSG00000054893.16	ENSMUST00000153840.2	596	5	2766	9	1491	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACCCAGGGGCGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6292357	6303949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_6292437_6293534_6293662_6296847_6296941_6303724
ENSMUSG00000054894.7_1	chr12	+	1479	5	FSM	ENSMUSG00000054894.7	ENSMUST00000021372.6	1485	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGTAAGTGAAGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	69771735	69791426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69771789_69784724_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054894.7_4	chr12	+	578	5	FSM	ENSMUSG00000054894.7	ENST00000557421.7	586	5	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTGAACTCAGACTCATA	NA	NA	NA	NA	NA	NA	NA	NA	69784730	69796424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69784836_69787672_69787882_69788418_69788591_69790492_69790569_69796408
ENSMUSG00000054894.7_5	chr12	+	556	4	ISM	ENSMUSG00000054894.7	ENST00000557421.7	586	5	13	5857	13	-864	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGCCTTCTCTGGAACT	NA	NA	NA	NA	NA	NA	NA	NA	69784736	69790568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_69784836_69787672_69787882_69788418_69788591_69790492
ENSMUSG00000054910.6_0	chr8	+	2218	2	FSM	ENSMUSG00000054910.6	ENSMUST00000131064.2	2255	2	18	19	18	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGCAATAATAAAAATCAGA	NA	NA	NA	NA	NA	NA	NA	NA	12722444	12729210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_12723026_12727573
ENSMUSG00000054920.13_0	chr5	+	3115	11	FSM	ENSMUSG00000054920.13	ENSMUST00000204097.3	3149	11	28	6	28	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTACAATGTTCTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	65264909	65325443	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65265205_65298602_65298786_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ENSMUSG00000054920.13_1	chr5	+	3356	10	FSM	ENSMUSG00000054920.13	ENSMUST00000204348.3	3380	10	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAAGATAGCCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	65288435	65325478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65289120_65300581_65300719_65301901_65302099_65305931_65306145_65313397_65313585_65316126_65316352_65318384_65318548_65320132_65320346_65321873_65322046_65324313
ENSMUSG00000054942.14_0	chr3	-	1117	11	FSM	ENSMUSG00000054942.14	ENST00000645756.1	1134	11	17	0	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAGTCATGGGCCACCA	NA	NA	NA	NA	NA	NA	NA	NA	152028096	151814393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151814432_151989375_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986
ENSMUSG00000054942.14_5	chr3	-	4011	14	FSM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAACACAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	152046015	151987221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986_152028114_152039117_152039255_152040888_152041067_152043362_152043682_152045888
ENSMUSG00000054942.14_6	chr3	-	1085	10	ISM	ENSMUSG00000054942.14	ENSMUST00000199334.5	4024	14	17918	2162	11	-2162	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTTAAAAACAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	152028102	151989375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_151989473_151990838_151990974_151993141_151993241_151994692_151994780_151996096_151996170_151996427_151996547_152002753_152002855_152023250_152023375_152026246_152026381_152027986
ENSMUSG00000054942.14_9	chr3	-	2809	4	FSM	ENSMUSG00000054942.14	ENSMUST00000199397.2	2842	4	27	6	27	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATTCCACTTCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	152045983	152037037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_152039255_152040888_152041067_152043362_152043682_152045888
ENSMUSG00000054951.4_0	chr17	-	2147	2	FSM	ENSMUSG00000054951.4	ENSMUST00000068258.3	2159	2	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGTGGCATCAGCCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	41191437	41186372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_41187753_41190670
ENSMUSG00000054967.8_0	chr15	-	2208	5	FSM	ENSMUSG00000054967.8	ENSMUST00000229055.2	2212	5	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGATGGCTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	76809646	76794572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168_76802262_76809575
ENSMUSG00000054967.8_1	chr15	-	2136	4	FSM	ENSMUSG00000054967.8	ENSMUST00000048854.8	1608	4	-50	-478	-50	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGATGGCTCTGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	76802260	76794572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76796376_76801489_76801604_76801834_76801962_76802168
ENSMUSG00000054976.15_0	chr1	+	3495	6	FSM	ENSMUSG00000054976.15	ENSMUST00000113494.9	4540	6	420	625	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3852	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTAGCCATCCTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	81055460	81277186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_81055611_81064973_81065211_81169465_81169768_81218598_81219685_81246758_81246969_81275676
ENSMUSG00000054986.14_0	chr11	+	1135	11	FSM	ENSMUSG00000054986.14	ENST00000403066.5	1140	11	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCCACCCGAGCGCTG	NA	NA	NA	NA	NA	NA	NA	NA	4014934	4025561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4015027_4016120_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391
ENSMUSG00000054986.14_1	chr11	+	1597	12	FSM	ENSMUSG00000054986.14	ENST00000215812.9	1605	12	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAGTTCTGTAAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	4014931	4026741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4015006_4016136_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054986.14_12	chr11	+	1525	11	ISM	ENSMUSG00000054986.14	ENST00000215812.9	1605	12	1205	6	1205	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAGTTCTGTAAGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	4016134	4026741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_4016213_4016459_4016504_4016639_4016700_4017955_4018145_4019254_4019351_4020083_4020145_4021408_4021493_4024719_4024827_4025165_4025306_4025391_4025562_4026245
ENSMUSG00000054999.3_0	chr19	+	2323	17	FSM	ENSMUSG00000054999.3	ENST00000340252.8	2334	17	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCAGCCCTGTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	6155867	6165581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6156028_6156115_6156289_6156374_6156497_6156852_6156976_6158487_6158772_6158852_6158958_6159448_6159784_6162182_6162269_6162358_6162423_6162504_6162573_6162724_6162817_6162905_6162997_6164471_6164554_6164633_6164808_6164883_6164972_6165075_6165169_6165398
ENSMUSG00000054999.3_2	chr19	+	2087	17	FSM	ENSMUSG00000054999.3	ENST00000356632.7	2100	17	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCTGTCCCTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	6155872	6165584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6156028_6156115_6156289_6156374_6156497_6156852_6156976_6158487_6158772_6159448_6159535_6159663_6159784_6162182_6162269_6162358_6162423_6162504_6162573_6162724_6162817_6162905_6162997_6164471_6164554_6164633_6164808_6164883_6164972_6165075_6165169_6165398
ENSMUSG00000054999.3_6	chr19	+	868	8	FSM	ENSMUSG00000054999.3	ENST00000526799.5	878	8	4	6	4	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGTCCCTTGGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	6162183	6165588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6162269_6162358_6162423_6162724_6162817_6164471_6164554_6164633_6164808_6164883_6164972_6165075_6165169_6165398
ENSMUSG00000055013.17_1	chr1	+	2463	17	FSM	ENSMUSG00000055013.17	ENST00000427215.2	2473	17	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTCATCTGAGCTCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	89383160	89816604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89383315_89532319_89532379_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762157_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412
ENSMUSG00000055013.17_26	chr1	+	1048	9	FSM	ENSMUSG00000055013.17	ENST00000619456.4	1058	9	1	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTAGCGGTGGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	89532318	89631291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89631131
ENSMUSG00000055013.17_28	chr1	+	4328	18	FSM	ENSMUSG00000055013.17	ENST00000428334.6	4332	18	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCATCCTCCGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	89532320	89818970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89694027_89694187_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412_89817902_89818337
ENSMUSG00000055013.17_46	chr1	+	1279	7	FSM	ENSMUSG00000055013.17	ENST00000444431.1	1302	7	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAAAGAAGTTCATAAA	NA	NA	NA	NA	NA	NA	NA	NA	89716895	89817677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412_89816536_89817397
ENSMUSG00000055013.17_8	chr1	+	5560	18	FSM	ENSMUSG00000055013.17	ENST00000409538.5	5571	18	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTCCTTGTTTCACA	NA	NA	NA	NA	NA	NA	NA	NA	89507968	89818953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89509376_89532319_89532379_89537217_89537306_89555482_89555569_89558109_89558252_89561881_89562017_89591382_89591511_89592755_89592912_89598900_89598994_89653682_89653788_89671449_89671619_89716884_89717047_89762155_89762311_89765433_89765525_89770742_89770966_89815227_89815484_89816412_89817902_89818337
ENSMUSG00000055022.15_0	chr15	+	2858	16	FSM	ENSMUSG00000055022.15	ENST00000547849.5	2865	16	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCCTCCTGCAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	92059303	92184174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_92059543_92114196_92114329_92118327_92118361_92126503_92126637_92129981_92130155_92132305_92132402_92140771_92140979_92143608_92143709_92143841_92144024_92148739_92148865_92150277_92150396_92151790_92151942_92153727_92153856_92159353_92159536_92169114_92169236_92183436
ENSMUSG00000055024.13_3	chr15	+	8234	30	FSM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACACCTGAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	81470837	81536264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_81470924_81485108_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ENSMUSG00000055024.13_33	chr15	+	8150	29	ISM	ENSMUSG00000055024.13	ENST00000674155.1	8251	30	14277	9	14277	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGACACCTGAGCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	81485106	81536264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_81485747_81492397_81492575_81494555_81494818_81495610_81495725_81497370_81497617_81500232_81500327_81500926_81501065_81504200_81504319_81505262_81505438_81508725_81508836_81510538_81510677_81511303_81511736_81512493_81512674_81512793_81512939_81514201_81514321_81515814_81516055_81516624_81516714_81518204_81518286_81520378_81520436_81520966_81521045_81523180_81523249_81523941_81524093_81524195_81524343_81524640_81524755_81525460_81525627_81527227_81527393_81529075_81529238_81532539_81532822_81533002
ENSMUSG00000055027.18_0	chr6	-	3353	10	FSM	ENSMUSG00000055027.18	ENSMUST00000074301.10	3361	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTGTGATTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	71239258	71190924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71192894_71193711_71193881_71196241_71196406_71197911_71198005_71202315_71202506_71212326_71212366_71214340_71214472_71215531_71215746_71216533_71216711_71239051
ENSMUSG00000055027.18_1	chr6	-	3289	9	FSM	ENSMUSG00000055027.18	ENSMUST00000114186.9	3292	9	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCCTGTGATTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	71239234	71190925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71192894_71193711_71193881_71196241_71196406_71197911_71198005_71202315_71202506_71214340_71214472_71215531_71215746_71216533_71216711_71239051
ENSMUSG00000055041.9_0	chr15	+	1019	2	FSM	ENSMUSG00000055041.9	ENSMUST00000068407.6	1037	2	6	12	6	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATTAAAAACATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	76784115	76785493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76784193_76784551
ENSMUSG00000055041.9_1	chr15	+	941	1	NIC	ENSMUSG00000055041.9	novel	1037	2	NA	NA	414	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAACTATTAAAAACATGT	NA	NA	NA	NA	NA	NA	NA	NA	76784549	76785490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_+_76784500_76785500
ENSMUSG00000055044.13_0	chr19	-	2559	7	FSM	ENSMUSG00000055044.13	ENSMUST00000068439.13	2571	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCTGTTCCTGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	40260048	40209616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40211216_40211494_40211613_40218950_40219103_40231849_40232044_40238062_40238148_40240353_40240506_40259789
ENSMUSG00000055053.19_0	chr10	-	6227	9	FSM	ENSMUSG00000055053.19	ENSMUST00000105321.10	6237	9	10	0	-4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGGTTCTTCCTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	81263011	81232019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81236906_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUSG00000055053.19_6	chr10	-	3160	9	FSM	ENSMUSG00000055053.19	ENSMUST00000078185.14	3163	9	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAAAAAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	81262948	81234974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUSG00000055053.19_7	chr10	-	3338	10	FSM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAAAAAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	81263000	81234974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100_81256633_81262909
ENSMUSG00000055053.19_8	chr10	-	3250	9	ISM	ENSMUSG00000055053.19	ENSMUST00000020461.15	3348	10	6372	3	6313	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCAAAAAAAAAAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	81256635	81234974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_81236906_81239185_81239263_81240657_81240843_81241922_81242049_81243388_81243514_81243939_81244064_81244168_81244244_81245444_81245517_81256100
ENSMUSG00000055065.8_0	chr15	-	4716	13	FSM	ENSMUSG00000055065.8	ENSMUST00000054014.9	4732	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGGTGTGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79430934	79411944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79414719_79415872_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ENSMUSG00000055065.8_1	chr15	-	4701	13	FSM	ENSMUSG00000055065.8	ENSMUST00000229877.2	4726	13	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGGTGTGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	79430925	79411944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79414719_79415878_79416116_79420157_79420218_79421197_79421260_79421635_79421747_79422759_79422933_79423018_79423180_79423519_79423662_79424613_79424680_79425234_79425369_79426687_79426788_79427906_79428058_79430395
ENSMUSG00000055067.16_2	chr1	-	1229	6	FSM	ENSMUSG00000055067.16	ENSMUST00000111134.2	1229	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTAGATCAAGGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	179345606	179222788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_179223397_179232847_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUSG00000055067.16_4	chr1	-	6858	12	NNC	ENSMUSG00000055067.16	novel	6871	12	NA	NA	7	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTGCATCTCTGGTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	179345592	178779532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr1_-_178785128_178799752_178799862_178871301_178871477_178877855_178877944_178913888_178914000_178920430_178920534_178921899_178921968_179232845_179232985_179237971_179238030_179239242_179239351_179250919_179250984_179345352
ENSMUSG00000055078.8_0	chr7	-	2515	11	FSM	ENSMUSG00000055078.8	ENST00000335625.10	2519	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATGCCATGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	57159801	57057415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159751
ENSMUSG00000055078.8_1	chr7	-	2706	11	FSM	ENSMUSG00000055078.8	ENST00000400081.7	2719	11	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATGCCATGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	57159728	57057415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245_57158306_57159487
ENSMUSG00000055078.8_2	chr7	-	2460	10	ISM	ENSMUSG00000055078.8	ENSMUST00000206382.2	2607	11	819	-51	819	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATGCCATGTAATTTA	NA	NA	NA	NA	NA	NA	NA	NA	57158300	57057415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_57058658_57063333_57063546_57067967_57068121_57071490_57071635_57102692_57102776_57138549_57138771_57138874_57138943_57140487_57140610_57157726_57157887_57158245
ENSMUSG00000055093.11_0	chr6	+	522	1	FSM	ENSMUSG00000055093.11	ENSMUST00000119780.2	471	1	-18	-33	-18	33	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	122433844	122434366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122433800_122434400
ENSMUSG00000055116.9_0	chr7	+	2894	20	FSM	ENSMUSG00000055116.9	ENSMUST00000047321.9	2908	20	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACTGTTCCCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	112806681	112913329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112806852_112833830_112833904_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055116.9_6	chr7	+	2955	21	FSM	ENSMUSG00000055116.9	ENSMUST00000210238.2	2976	21	17	4	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGTACTGTTCCCAATTG	NA	NA	NA	NA	NA	NA	NA	NA	112806780	112913329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112806852_112833830_112833904_112842558_112842719_112873832_112873961_112878663_112878790_112879856_112880010_112882463_112882503_112882727_112882770_112884205_112884364_112886323_112886404_112890667_112890761_112892384_112892503_112894650_112894801_112898393_112898641_112900757_112900865_112902547_112902699_112903530_112903620_112905224_112905334_112907822_112907917_112912000_112912104_112912665
ENSMUSG00000055128.16_0	chr14	+	1309	6	FSM	ENSMUSG00000055128.16	ENSMUST00000068532.10	1324	6	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTGGACACTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	47069593	47091647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641_47083790_47090835_47090944_47091155
ENSMUSG00000055128.16_5	chr14	+	385	2	FSM	ENSMUSG00000055128.16	ENSMUST00000140114.3	419	2	27	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAACACTGTAGACGTG	NA	NA	NA	NA	NA	NA	NA	NA	47069702	47077864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47069837_47077613
ENSMUSG00000055128.16_6	chr14	+	868	4	FSM	ENSMUSG00000055128.16	ENSMUST00000133989.8	873	4	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATTTTATCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47069688	47084043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47069837_47077613_47077754_47083330_47083509_47083641
ENSMUSG00000055137.8_0	chr13	-	722	9	FSM	ENSMUSG00000055137.8	ENST00000401647.7	728	9	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTATGCAAGGTAATCC	NA	NA	NA	NA	NA	NA	NA	NA	17869314	17497802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_17497862_17627041_17627138_17752074_17752167_17819365_17819487_17836803_17836855_17837323_17837410_17846285_17846360_17847135_17847188_17869223
ENSMUSG00000055137.8_1	chr13	-	633	8	ISM	ENSMUSG00000055137.8	ENST00000401647.7	728	9	22130	1	22130	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGGTATGCAAGGTAATC	NA	NA	NA	NA	NA	NA	NA	NA	17847190	17497803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_17497862_17627041_17627138_17752074_17752167_17819365_17819487_17836803_17836855_17837323_17837410_17846285_17846360_17847135
ENSMUSG00000055148.8_0	chr8	+	1838	3	FSM	ENSMUSG00000055148.8	ENSMUST00000067912.8	1847	3	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTTGGGGTTTAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	73072884	73075499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_73072994_73073269_73074087_73074587
ENSMUSG00000055150.16_0	chr7	+	3870	5	FSM	ENSMUSG00000055150.16	ENSMUST00000207347.2	3883	5	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTCAAAAAATCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6366278	6384695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6378517_6378614_6381207
ENSMUSG00000055150.16_1	chr7	+	2959	4	FSM	ENSMUSG00000055150.16	ENSMUST00000208390.2	2965	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATATACAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	6366308	6383910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6366347_6374304_6374396_6376125_6376253_6381207
ENSMUSG00000055150.16_2	chr7	+	3784	4	FSM	ENSMUSG00000055150.16	ENSMUST00000108559.3	1539	4	-59	-2186	-59	-32	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATAAAATAATAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	6374303	6384676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6374396_6376125_6376253_6378517_6378614_6381207
ENSMUSG00000055150.16_3	chr7	+	2896	3	FSM	ENSMUSG00000055150.16	ENSMUST00000086323.11	1443	3	-33	-1420	-33	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATATACAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	6374329	6383910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6374396_6376125_6376253_6381207
ENSMUSG00000055172.11_0	chr6	+	2960	11	FSM	ENSMUSG00000055172.11	ENSMUST00000068593.9	2981	11	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAAGGATCTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124489377	124500395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_124489760_124490610_124490837_124492625_124492819_124493670_124493818_124493914_124494112_124494319_124494468_124494651_124494774_124496310_124496390_124496679_124496836_124498578_124498654_124499160
ENSMUSG00000055184.5_0	chr1	+	2180	4	FSM	ENSMUSG00000055184.5	ENSMUST00000068613.5	2191	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTCACCAAAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131455645	131467604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131456591_131458391_131458470_131461546_131461672_131466572
ENSMUSG00000055184.5_1	chr1	+	692	3	FSM	ENSMUSG00000055184.5	ENST00000619376.4	707	3	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGATTTGCCGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	131456146	131466742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_131456591_131458391_131458470_131466572
ENSMUSG00000055200.8_0	chr7	+	1319	2	FSM	ENSMUSG00000055200.8	ENSMUST00000068641.8	1329	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGGAATTGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	27173197	27176784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27173297_27175564
ENSMUSG00000055200.8_1	chr7	+	1222	1	NIC	ENSMUSG00000055200.8	novel	1329	2	NA	NA	2370	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTGGAATTGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	27175562	27176784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_+_27175600_27176800
ENSMUSG00000055204.16_0	chr5	-	10445	34	FSM	ENSMUSG00000055204.16	ENSMUST00000014421.15	10458	34	12	1	-1	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCGTGCAGGTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90514424	90375025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUSG00000055204.16_10	chr5	-	9301	34	FSM	ENSMUSG00000055204.16	ENSMUST00000168058.7	9311	34	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGATATTGATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	90514421	90376163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426248_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUSG00000055204.16_16	chr5	-	8044	33	FSM	ENSMUSG00000055204.16	ENSMUST00000081914.13	8057	33	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTTTCCCATAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	90514077	90376326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90513525
ENSMUSG00000055204.16_23	chr5	-	8057	34	FSM	ENSMUSG00000055204.16	ENSMUST00000197021.2	8067	34	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAAGCACCACTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	90487602	90376609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90377201_90378664_90378830_90380099_90380279_90381759_90382009_90386797_90387011_90390722_90392354_90398233_90398384_90400725_90400882_90401353_90401802_90402498_90402671_90406292_90406410_90407943_90408040_90411117_90411281_90411849_90412026_90412485_90412700_90413289_90413433_90416190_90416337_90416496_90416609_90426101_90426251_90430709_90431463_90432899_90433003_90433346_90433491_90433694_90433823_90435107_90435196_90436442_90436553_90437096_90437289_90438806_90439045_90441060_90441156_90443443_90443678_90445845_90445994_90446398_90446547_90447847_90448005_90451770_90451925_90487507
ENSMUSG00000055235.12_0	chr5	-	1048	5	FSM	ENSMUSG00000055235.12	ENST00000628331.1	1066	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGAGTGGCTGGAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	24935389	24917579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24917750_24917847_24917952_24922964_24923386_24927632_24927775_24935178
ENSMUSG00000055239.11_0	chr6	-	3229	7	FSM	ENSMUSG00000055239.11	ENSMUST00000068697.11	3251	7	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGCCACTCGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	72876946	72818102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72820114_72825207_72825491_72826426_72826602_72827365_72827468_72835756_72835897_72838740_72838909_72876596
ENSMUSG00000055240.18_0	chr17	-	2640	4	FSM	ENSMUSG00000055240.18	ENSMUST00000167107.10	2659	4	16	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAGACTGATTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	33613599	33599231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33601561_33605395_33605442_33605658_33605786_33613461
ENSMUSG00000055240.18_1	chr17	-	6078	3	FSM	ENSMUSG00000055240.18	ENSMUST00000174512.4	6095	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTGCTAAACAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33613590	33599619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33605442_33605658_33605786_33613461
ENSMUSG00000055296.15_0	chr4	-	15957	18	FSM	ENSMUSG00000055296.15	ENSMUST00000068792.13	15981	18	17	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACCGGTGATAAACT	NA	NA	NA	NA	NA	NA	NA	NA	56947420	56866929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56922386_56922411_56923338_56923509_56924978_56925216_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ENSMUSG00000055296.15_5	chr4	-	2922	18	FSM	ENSMUSG00000055296.15	ENST00000374586.8	2946	18	16	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAGGATTCTGGATGA	NA	NA	NA	NA	NA	NA	NA	NA	56947407	56879942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_56880293_56886017_56886213_56888534_56888710_56890799_56890901_56899025_56899172_56899305_56899429_56903917_56904050_56906214_56906314_56910156_56910248_56912047_56912131_56916701_56916807_56922386_56922411_56923338_56923509_56924978_56925207_56926176_56926294_56936368_56936471_56937861_56937980_56946844
ENSMUSG00000055301.9_0	chr3	+	3422	9	FSM	ENSMUSG00000055301.9	ENSMUST00000090171.7	3432	9	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGGAATGGCGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	137923522	137939135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137923670_137927473_137927576_137928722_137928862_137929491_137929580_137929672_137929890_137931951_137932213_137933669_137933806_137934539_137934679_137936942
ENSMUSG00000055302.6_0	chr5	-	1637	2	FSM	ENSMUSG00000055302.6	ENSMUST00000068795.4	1648	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGCCTGTGTTTAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	36954105	36952210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36953289_36953546
ENSMUSG00000055305.16_0	chr7	+	3505	4	FSM	ENSMUSG00000055305.16	ENSMUST00000108438.10	3508	4	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCGTTTTCTCATAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	23969847	23977219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23970107_23971037_23971096_23972672_23972800_23974158
ENSMUSG00000055319.9_0	chr7	+	4483	19	FSM	ENSMUSG00000055319.9	ENSMUST00000042942.10	4505	19	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGCAAACTGTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	128346677	128386549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_128346903_128351782_128352310_128354429_128354641_128355773_128355968_128357039_128357130_128359486_128359608_128363139_128363230_128364113_128364256_128365664_128365874_128367107_128367227_128367849_128368003_128369290_128369387_128373888_128374087_128378494_128378651_128379007_128379111_128380152_128380339_128380786_128380950_128381359_128381462_128385151
ENSMUSG00000055320.19_0	chr7	+	9878	13	FSM	ENSMUSG00000055320.19	ENSMUST00000239404.2	9899	13	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAACAGTCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	112278539	112506004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441310_112455259_112455272_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ENSMUSG00000055320.19_1	chr7	+	9882	12	NNC	ENSMUSG00000055320.19	novel	9899	13	NA	NA	2	-8	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCAACAGTCTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	112278528	112506004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_112278934_112358590_112358847_112438622_112438688_112441246_112441315_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ENSMUSG00000055320.19_2	chr7	+	9947	14	FSM	ENSMUSG00000055320.19	ENSMUST00000239442.2	9962	14	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGTTGTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112278539	112506010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112278934_112358590_112358847_112438622_112438688_112441094_112441158_112441246_112441310_112455259_112455272_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ENSMUSG00000055320.19_7	chr7	+	9451	11	FSM	ENSMUSG00000055320.19	ENSMUST00000069256.12	9480	11	27	2	-27	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCTGTGTTGTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	112358617	112506010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_112358847_112438622_112438688_112441246_112441310_112456004_112456140_112457360_112457408_112458275_112458338_112460638_112460764_112475281_112475456_112490925_112491067_112493518_112493672_112497753
ENSMUSG00000055322.17_0	chr1	-	9943	35	FSM	ENSMUSG00000055322.17	ENSMUST00000169786.8	9966	35	12	11	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAACCCAGCCTGTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	74163594	73949400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73975056_73975096_73975490_73975515_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ENSMUSG00000055322.17_1	chr1	-	9886	33	FSM	ENSMUSG00000055322.17	ENSMUST00000191104.7	9904	33	7	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAACCCAGCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	74163601	73949401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034541_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74163450
ENSMUSG00000055322.17_13	chr1	-	2811	12	FSM	ENSMUSG00000055322.17	ENSMUST00000187691.7	2813	12	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGTCCCTTGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	73967670	73953069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73967619
ENSMUSG00000055322.17_15	chr1	-	1450	12	FSM	ENSMUSG00000055322.17	ENST00000310858.10	1471	12	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAATCTCAGTCACTCA	NA	NA	NA	NA	NA	NA	NA	NA	74034524	74002758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_74003158_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359
ENSMUSG00000055322.17_3	chr1	-	9899	33	FSM	ENSMUSG00000055322.17	ENSMUST00000187584.7	9916	33	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACAAACCCAGCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	74130504	73949401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_73953834_73955597_73955631_73956024_73956094_73956791_73956961_73957156_73957229_73958812_73958891_73959665_73959759_73960116_73960249_73960925_73961013_73963864_73964929_73967070_73967270_73976383_73976477_73980136_73980213_73981068_73981266_73991579_73993110_74020072_74020190_74021391_74021458_74024177_74024308_74024861_74024938_74025033_74025095_74025421_74025535_74029469_74029554_74030833_74030899_74031258_74031382_74032321_74032373_74034359_74034532_74036207_74036264_74041445_74041497_74042675_74042718_74055303_74055346_74107767_74107806_74118357_74118473_74130331
ENSMUSG00000055334.5_0	chr9	+	1380	9	FSM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAAGGTTGCTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56858165	56890483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56858238_56864297_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUSG00000055334.5_1	chr9	+	1307	8	ISM	ENSMUSG00000055334.5	ENSMUST00000068856.5	1391	9	6137	7	6137	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACAAAGGTTGCTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	56864298	56890483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_56864461_56870279_56870428_56877537_56877643_56877873_56877971_56882496_56882595_56885302_56885381_56888128_56888210_56889945
ENSMUSG00000055341.11_0	chr13	-	2049	3	ISM	ENSMUSG00000055341.11	ENSMUST00000049705.8	2117	4	9979	7	9979	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAATTTGTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	67444497	67440520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67442345_67443810_67443907_67444368
ENSMUSG00000055341.11_1	chr13	-	2110	4	FSM	ENSMUSG00000055341.11	ENSMUST00000049705.8	2117	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAAATTTGTGTGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	67454476	67440520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67442345_67443810_67443907_67444368_67444496_67454413
ENSMUSG00000055360.14_0	chr13	+	955	6	FSM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	13357311	13366503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_13357398_13357501_13357630_13360374_13360551_13363952_13364061_13365170_13365354_13366229
ENSMUSG00000055360.14_1	chr13	+	869	5	ISM	ENSMUSG00000055360.14	ENSMUST00000126540.8	971	6	201	5	178	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAACATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	13357501	13366503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_13357630_13360374_13360551_13363952_13364061_13365170_13365354_13366229
ENSMUSG00000055368.15_2	chr8	+	2883	14	FSM	ENSMUSG00000055368.15	ENST00000219833.13	2898	14	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGGTTGTACAGTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	93687816	93728294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93715646_93715782_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641_93723714_93727300
ENSMUSG00000055368.15_4	chr8	+	1706	12	FSM	ENSMUSG00000055368.15	ENST00000566163.5	1719	12	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGATGCAGAGCTGAAC	NA	NA	NA	NA	NA	NA	NA	NA	93687862	93723711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_93688150_93697797_93697930_93699379_93699618_93708529_93708669_93716753_93716858_93717970_93718096_93719433_93719547_93720644_93720774_93721261_93721362_93722243_93722345_93722594_93722763_93723641
ENSMUSG00000055371.18_0	chr2	-	4705	14	FSM	ENSMUSG00000055371.18	ENSMUST00000102759.8	4717	14	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTAAGTTTGAATTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	52632205	52581680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52584950_52590016_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609708_52609808_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055371.18_5	chr2	-	1915	12	FSM	ENSMUSG00000055371.18	ENSMUST00000127316.8	1928	12	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATATTAAAAAAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	52632284	52589517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_52590184_52593113_52593265_52596410_52596466_52597929_52598018_52598154_52598238_52599607_52599703_52604829_52605017_52605699_52605770_52606436_52606584_52609913_52609990_52610895_52610981_52632072
ENSMUSG00000055401.15_0	chr4	-	1231	6	FSM	ENSMUSG00000055401.15	ENSMUST00000168503.8	1240	6	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGTTCATCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	148236585	148230174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236469
ENSMUSG00000055401.15_1	chr4	-	1926	6	FSM	ENSMUSG00000055401.15	ENSMUST00000105706.8	1938	6	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACATGTTCATCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	148236355	148230174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148235544
ENSMUSG00000055401.15_5	chr4	-	1316	6	FSM	ENSMUSG00000055401.15	ENSMUST00000030858.14	1346	6	21	9	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACCCAGCCTGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	148236349	148230252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236070
ENSMUSG00000055401.15_6	chr4	-	1139	6	FSM	ENSMUSG00000055401.15	ENSMUST00000056965.12	1163	6	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACCCAGCCTGGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	148236500	148230252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_148230643_148230777_148230914_148231296_148231393_148231751_148231879_148233835_148234124_148236398
ENSMUSG00000055407.15_0	chr7	+	2334	3	FSM	ENSMUSG00000055407.15	ENSMUST00000107100.3	2335	3	0	1	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98917552	98986343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98918521_98964895_98965110_98985191
ENSMUSG00000055407.15_1	chr7	+	3379	4	FSM	ENSMUSG00000055407.15	ENSMUST00000068973.11	3430	4	51	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGTGTCTCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	98916704	98986343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98918521_98964895_98965110_98966678_98966876_98985191
ENSMUSG00000055407.15_2	chr7	+	4903	3	FSM	ENSMUSG00000055407.15	ENSMUST00000127492.2	4920	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAAACACCACTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	98916701	98969548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98918521_98964895_98965110_98966678
ENSMUSG00000055409.15_0	chr7	+	1375	12	FSM	ENSMUSG00000055409.15	ENST00000325319.9	1387	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGTGAGGAATAAGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	49625012	50098709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_49625192_49632423_49632553_49712365_49712517_49825972_49826070_49869329_49869403_49870001_49870085_49878539_49878675_49879903_49880007_49899388_49899463_49907913_49908014_49929265_49929395_50098587
ENSMUSG00000055415.9_0	chr11	+	6805	22	FSM	ENSMUSG00000055415.9	ENSMUST00000077659.6	6825	22	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAATCTGAAATCCTATTA	NA	NA	NA	NA	NA	NA	NA	NA	43042440	43153107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43042717_43044050_43044246_43063536_43063742_43080400_43080487_43085383_43085491_43088263_43088396_43091966_43092095_43092794_43093048_43093838_43094078_43103237_43103427_43106776_43107378_43109731_43109842_43112975_43113103_43116301_43116487_43121170_43121493_43125189_43125267_43126476_43126603_43136230_43136432_43138278_43138360_43139712_43139818_43145002_43145191_43150235
ENSMUSG00000055435.7_0	chr8	-	3187	3	FSM	ENSMUSG00000055435.7	ENSMUST00000069009.7	3223	3	33	3	33	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACCAAAAGAGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	116433802	116409683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_116411501_116419870_116419932_116432493
ENSMUSG00000055435.7_1	chr8	-	6346	1	FSM	ENSMUSG00000055435.7	ENSMUST00000109104.2	6360	1	4	10	4	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACTAAACGCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116434529	116428183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_116428200_116434500
ENSMUSG00000055436.19_1	chr3	-	3085	13	FSM	ENSMUSG00000055436.19	ENSMUST00000121326.8	3106	13	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGTATTTGAGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	157742262	157716116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088_157737286_157742152
ENSMUSG00000055436.19_13	chr3	-	2630	12	FSM	ENSMUSG00000055436.19	ENSMUST00000072875.15	2654	12	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCACAAGTCATGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	157737389	157716565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157717841_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ENSMUSG00000055436.19_18	chr3	-	2115	12	FSM	ENSMUSG00000055436.19	ENST00000370951.5	2138	12	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAACGCAGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	157737261	157716949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157717838_157717946_157718086_157718416_157718513_157719588_157719679_157721958_157722091_157723446_157723529_157724948_157725077_157727012_157727063_157727596_157727690_157728477_157728588_157732361_157732496_157737088
ENSMUSG00000055447.20_1	chr16	+	1346	11	FSM	ENSMUSG00000055447.20	ENSMUST00000229101.2	1358	11	10	2	-2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	49676005	49731442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728442_49731231
ENSMUSG00000055447.20_10	chr16	+	1261	10	FSM	ENSMUSG00000055447.20	ENSMUST00000230281.2	1271	10	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAATTGGAATCCCATTT	NA	NA	NA	NA	NA	NA	NA	NA	49676026	49731442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_49676196_49688127_49688476_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49728416_49728446_49731236
ENSMUSG00000055447.20_5	chr16	+	5235	10	FSM	ENSMUSG00000055447.20	ENSMUST00000084838.14	5250	10	9	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTATTTTGTTGGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	49676016	49735367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_49676196_49688127_49688476_49689380_49689444_49704527_49704618_49714539_49714648_49715731_49715825_49716718_49716812_49718402_49718496_49727143_49727176_49731231
ENSMUSG00000055485.7_0	chr2	-	7850	15	FSM	ENSMUSG00000055485.7	ENSMUST00000069098.7	7864	15	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGCCTTTTATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	156921160	156857718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156860420_156862109_156863458_156864736_156864808_156865716_156865789_156869306_156869559_156871399_156871568_156872438_156872544_156872707_156872939_156875177_156875304_156879089_156879231_156881746_156882923_156883813_156883877_156895438_156895598_156902107_156902333_156920148
ENSMUSG00000055489.9_0	chr7	+	7762	22	FSM	ENSMUSG00000055489.9	ENSMUST00000043944.6	7785	22	14	9	2	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAACTGAAGCCTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	51160790	51248448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_51160999_51168564_51168609_51175945_51176000_51185195_51185238_51187469_51187584_51194538_51194608_51196409_51196695_51203577_51203692_51205905_51206019_51215228_51215364_51216010_51216117_51216236_51216298_51220014_51220167_51222747_51222823_51224425_51224649_51226251_51226422_51229232_51229331_51233460_51233592_51235070_51235277_51237385_51237565_51240310_51240417_51243371
ENSMUSG00000055489.9_11	chr7	+	2477	18	ISM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	11532	11	11532	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAATTTTGTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	51187474	51245197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_51187584_51194538_51194608_51196409_51196695_51203577_51203692_51205905_51206019_51215228_51215364_51216010_51216117_51216236_51216298_51220014_51220167_51222747_51222823_51224425_51224649_51226251_51226422_51229232_51229331_51233460_51233592_51235070_51235277_51237385_51237565_51243371_51243458_51245032
ENSMUSG00000055489.9_2	chr7	+	2539	19	FSM	ENSMUSG00000055489.9	ENST00000683197.1	2550	19	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATAATTTTGTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	51175942	51245197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_51176000_51187469_51187584_51194538_51194608_51196409_51196695_51203577_51203692_51205905_51206019_51215228_51215364_51216010_51216117_51216236_51216298_51220014_51220167_51222747_51222823_51224425_51224649_51226251_51226422_51229232_51229331_51233460_51233592_51235070_51235277_51237385_51237565_51243371_51243458_51245032
ENSMUSG00000055491.15_0	chr19	+	5236	14	FSM	ENSMUSG00000055491.15	ENSMUST00000111899.8	5246	14	2	8	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGAACTTCCAGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	46044979	46061342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46045183_46049841_46050016_46050582_46050730_46050840_46050943_46051050_46053920_46054102_46054157_46055667_46055726_46056459_46056528_46057477_46058208_46059715_46059851_46059957_46060025_46060140_46060263_46060621_46060774_46060987
ENSMUSG00000055531.13_0	chr10	-	6513	10	FSM	ENSMUSG00000055531.13	ENSMUST00000069168.13	6526	10	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAATACTTTGCAGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	117212864	117180579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUSG00000055531.13_10	chr10	-	2224	11	FSM	ENSMUSG00000055531.13	ENSMUST00000176670.8	2227	11	3	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	117212831	117184946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117185373_117191839_117192030_117194897_117195052_117196344_117196461_117196760_117197266_117197678_117197790_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUSG00000055531.13_9	chr10	-	2173	10	FSM	ENSMUSG00000055531.13	ENSMUST00000176686.8	2200	10	27	0	-17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTAAAGCTGTTCACGT	NA	NA	NA	NA	NA	NA	NA	NA	117212851	117184943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117185407_117191839_117192033_117194897_117195052_117196344_117196461_117196760_117197266_117197918_117198093_117198879_117199026_117201985_117202090_117203683_117203894_117212743
ENSMUSG00000055538.8_0	chr14	-	4540	4	FSM	ENSMUSG00000055538.8	ENSMUST00000069180.8	4556	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATGGAGGCTCGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	25769454	25712072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_25715827_25720050_25720216_25757434_25757636_25769034
ENSMUSG00000055547.5_0	chr1	+	1752	2	FSM	ENSMUSG00000055547.5	ENST00000308641.6	1761	2	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTCCATCAGTATACCAA	NA	NA	NA	NA	NA	NA	NA	NA	152631948	152633911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_152633309_152633519
ENSMUSG00000055553.17_0	chr8	-	877	7	FSM	ENSMUSG00000055553.17	ENSMUST00000121623.8	884	7	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGAGCAGTAATTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	70975811	70960926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055553.17_3	chr8	-	1196	5	FSM	ENSMUSG00000055553.17	ENSMUST00000093456.12	1216	5	11	9	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGGAACACTTATAGCA	NA	NA	NA	NA	NA	NA	NA	NA	70975819	70966054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70966819_70968044_70968092_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055553.17_6	chr8	-	577	4	ISM	ENSMUSG00000055553.17	ENST00000601630.5	633	5	3050	7	3050	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGGAAGAGACACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	70972701	70966611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_70966819_70968044_70968147_70971014_70971168_70972586
ENSMUSG00000055553.17_7	chr8	-	626	5	FSM	ENSMUSG00000055553.17	ENST00000601630.5	633	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGGAAGAGACACATGAA	NA	NA	NA	NA	NA	NA	NA	NA	70975751	70966611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70966819_70968044_70968147_70971014_70971168_70972586_70972712_70975712
ENSMUSG00000055567.19_0	chr1	+	13552	64	FSM	ENSMUSG00000055567.19	ENST00000673951.1	13573	64	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATTTAATGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66507373	66738295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66507698_66508622_66508672_66511134_66511292_66512389_66512692_66522399_66522524_66524923_66525001_66530150_66530291_66542688_66542951_66544081_66544217_66545788_66546006_66546484_66546626_66548425_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589096_66590104_66590212_66591312_66591410_66594085_66594259_66608948_66609162_66629353_66629490_66632823_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666349_66666482_66670546_66670691_66675015_66675117_66676086_66676174_66677072_66677257_66678404_66678500_66679709_66679800_66680774_66680877_66683430_66683612_66685529_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_29	chr1	+	13394	64	FSM	ENSMUSG00000055567.19	ENST00000439458.5	13415	64	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATTTAATGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66507537	66738295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66507698_66508622_66508672_66511134_66511292_66512389_66512692_66522399_66522524_66524923_66525001_66530150_66530291_66542688_66542951_66544081_66544217_66545788_66546006_66546484_66546626_66548425_66548695_66549708_66550084_66560613_66560761_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589102_66590104_66590212_66591312_66591410_66594085_66594259_66608948_66609162_66629353_66629490_66632823_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666349_66666482_66670546_66670691_66675015_66675117_66676086_66676174_66677072_66677257_66678404_66678500_66679709_66679800_66680774_66680877_66683430_66683612_66685529_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66724774_66724832_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055567.19_90	chr1	+	13279	63	FSM	ENSMUSG00000055567.19	ENST00000272845.10	13297	63	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCATTTAATGTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	66507580	66738295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_66507698_66508622_66508672_66511134_66511292_66512389_66512692_66522399_66522524_66524923_66525001_66530150_66530291_66542688_66542951_66544081_66544217_66545788_66546006_66546484_66546626_66548425_66548695_66549708_66550084_66560613_66560746_66564801_66564950_66567030_66567180_66569130_66569298_66569913_66570013_66588886_66589102_66590104_66590212_66591312_66591410_66594085_66594259_66608948_66609162_66629353_66629490_66632823_66632958_66640213_66640380_66647550_66647652_66651246_66651448_66657320_66657429_66658583_66658723_66661614_66661797_66662368_66662501_66665586_66665774_66666349_66666482_66670546_66670691_66675015_66675117_66676086_66676174_66677072_66677257_66678404_66678500_66679709_66679800_66680774_66680877_66683430_66683612_66685529_66685799_66687539_66687675_66688059_66688199_66688832_66688930_66690618_66690790_66692454_66692548_66693168_66693205_66693542_66693762_66708254_66708456_66710744_66710869_66711815_66711942_66713145_66713270_66714045_66714253_66716474_66716660_66717223_66717390_66718722_66718903_66722307_66722447_66731666_66731749_66732850_66732963_66733523_66733724_66734488
ENSMUSG00000055612.16_0	chr2	+	2409	9	FSM	ENSMUSG00000055612.16	ENSMUST00000102691.11	2424	9	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTGTGTTTATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72306514	72317234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_72306656_72309249_72309373_72312034_72312293_72312772_72312857_72313698_72313906_72314222_72314361_72314942_72315093_72315519_72315657_72316063
ENSMUSG00000055632.19_0	chr2	+	15213	98	FSM	ENSMUSG00000055632.19	ENST00000683500.1	15227	98	11	3	10	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGGCCAGAGCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	31204436	31350402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31204689_31223866_31223938_31225425_31225585_31226518_31226642_31233067_31233240_31234023_31234131_31234480_31234602_31236473_31236738_31239989_31240135_31240530_31240653_31242620_31242894_31243727_31243870_31244177_31244306_31244633_31244748_31246235_31246386_31250892_31251082_31251808_31251905_31252169_31252298_31254228_31254374_31258962_31259076_31259185_31259343_31260792_31260959_31268252_31268381_31270239_31270495_31271053_31271141_31272338_31272534_31273661_31273793_31274051_31274200_31274850_31274978_31275161_31275317_31276622_31276902_31278178_31278458_31279014_31279124_31279266_31279437_31280951_31281107_31281441_31281539_31282141_31282238_31282973_31283151_31284700_31284859_31286032_31286157_31286655_31286832_31287487_31287585_31287700_31287821_31288892_31289055_31290030_31290313_31291611_31291780_31292423_31292538_31293664_31293752_31294725_31294918_31295497_31295672_31295792_31295907_31296392_31296536_31297003_31297155_31298942_31299162_31301260_31301375_31301732_31301921_31302485_31302583_31303265_31303428_31303578_31303693_31304538_31304742_31305212_31305295_31306721_31306854_31309833_31309978_31310069_31310230_31310309_31310435_31310784_31310969_31312614_31312713_31313101_31313369_31313903_31314095_31314208_31314291_31314377_31314515_31315149_31315292_31315365_31315511_31316156_31316285_31316808_31316966_31318199_31318322_31318966_31319132_31320350_31320459_31320726_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ENSMUSG00000055632.19_28	chr2	+	15635	98	NNC	ENSMUSG00000055632.19	novel	15646	98	NA	NA	9	-5	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTGATGTCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31204435	31350745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_31204689_31223866_31223938_31225425_31225585_31226518_31226642_31233067_31233240_31234023_31234131_31234480_31234602_31236473_31236738_31239989_31240135_31240530_31240653_31242620_31242894_31243727_31243870_31244177_31244306_31244633_31244748_31246235_31246386_31250892_31251082_31251808_31251905_31252169_31252298_31254228_31254374_31258962_31259076_31259185_31259343_31260792_31260959_31268252_31268381_31270239_31270495_31271053_31271141_31272338_31272534_31273661_31273827_31274058_31274200_31274850_31274978_31275161_31275317_31276622_31276902_31278178_31278458_31279014_31279124_31279266_31279462_31280951_31281133_31281426_31281539_31282141_31282238_31282973_31283151_31284700_31284859_31286032_31286157_31286655_31286832_31287487_31287585_31287700_31287821_31288892_31289055_31290030_31290313_31291611_31291780_31292423_31292538_31293664_31293752_31294725_31294918_31295497_31295672_31295792_31295907_31296392_31296536_31297003_31297155_31298942_31299162_31301260_31301375_31301732_31301921_31302485_31302583_31303265_31303428_31303578_31303693_31304538_31304742_31305212_31305295_31306721_31306854_31309833_31309978_31310069_31310230_31310309_31310435_31310784_31310969_31312614_31312713_31313101_31313369_31313903_31314080_31314208_31314291_31314377_31314515_31315149_31315292_31315365_31315511_31316156_31316285_31316808_31316966_31318199_31318322_31318966_31319132_31320350_31320459_31320726_31320862_31321093_31321229_31322144_31322336_31323286_31323501_31324695_31324831_31325722_31325914_31328259_31328342_31335085_31335356_31340819_31340970_31342821_31342960_31343054_31343177_31343394_31343633_31344639_31344703_31344816_31344940_31345503_31345639_31347071_31347201_31347744_31348066_31348695_31348816_31349092_31349220_31350061
ENSMUSG00000055633.7_0	chr7	+	1078	2	FSM	ENSMUSG00000055633.7	ENSMUST00000069324.7	1096	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCATTCTTGGGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	5054548	5056716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5054714_5055803
ENSMUSG00000055639.17_0	chr14	-	4810	8	FSM	ENSMUSG00000055639.17	ENST00000611519.4	4826	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGCCTTGCGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98407182	98024300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98207242_98207405_98256313_98256430_98405918
ENSMUSG00000055639.17_2	chr14	-	4642	7	FSM	ENSMUSG00000055639.17	ENST00000620444.4	4664	7	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCGCCTTGCGACTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98407176	98024300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_98027056_98065177_98065247_98065676_98065821_98068729_98068878_98077524_98077677_98256313_98256430_98405918
ENSMUSG00000055652.15_0	chr7	+	3400	3	FSM	ENSMUSG00000055652.15	ENSMUST00000171155.4	3403	3	2	1	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTGGGTTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	75498059	75523878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75498222_75515084_75516890_75522445
ENSMUSG00000055652.15_1	chr7	+	3377	3	FSM	ENSMUSG00000055652.15	ENSMUST00000092073.11	3385	3	8	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCCTTTGGGTTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	75498093	75523878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75498233_75515084_75516890_75522445
ENSMUSG00000055652.15_2	chr7	+	2273	2	FSM	ENSMUSG00000055652.15	ENSMUST00000206019.2	2299	2	14	12	-9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGTCACAAGTCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	75498102	75517227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75498233_75515084
ENSMUSG00000055660.10_0	chr17	-	6616	9	FSM	ENSMUSG00000055660.10	ENSMUST00000234990.2	6640	9	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACATGCAGTTTTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	95057306	95030027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044_95055846_95057164
ENSMUSG00000055660.10_1	chr17	-	2549	8	FSM	ENSMUSG00000055660.10	ENSMUST00000171284.3	2560	8	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCCCTTTATAGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95057439	95034515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_95034824_95040516_95040609_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95055044_95055846_95056813
ENSMUSG00000055660.10_2	chr17	-	1315	7	FSM	ENSMUSG00000055660.10	ENST00000319888.10	1328	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAAAAGTTGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95055429	95034678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_95034824_95040974_95041082_95042763_95042939_95046881_95046952_95047813_95048184_95051359_95051423_95055044
ENSMUSG00000055670.15_1	chr11	+	11135	55	FSM	ENSMUSG00000055670.15	ENSMUST00000069395.7	11150	55	8	7	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGTGTGGATTTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	72687059	72817939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790521_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806142_72807298_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ENSMUSG00000055670.15_4	chr11	+	11210	55	FSM	ENSMUSG00000055670.15	ENSMUST00000172220.8	11249	55	30	9	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCTGTGTGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72687081	72817937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790521_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ENSMUSG00000055670.15_6	chr11	+	11280	55	FSM	ENSMUSG00000055670.15	ENSMUST00000207107.2	11306	55	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCTGTGTGGATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	72687098	72817937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_72687477_72708756_72708902_72712580_72712776_72714205_72714378_72714900_72715101_72716877_72717089_72721403_72721521_72722368_72722548_72728008_72728108_72734081_72734174_72735164_72735314_72739467_72739580_72741384_72741598_72742659_72742761_72743984_72744155_72746208_72746343_72749156_72749228_72750407_72750523_72754700_72754861_72755561_72755684_72755782_72755906_72756650_72756818_72756897_72756980_72757429_72757632_72758747_72758897_72760512_72760754_72763429_72763510_72764689_72764784_72765723_72766187_72767381_72767547_72771396_72771517_72772041_72772204_72775167_72775298_72777459_72777599_72778968_72779135_72779822_72780086_72781917_72782052_72784087_72784239_72785971_72786112_72790329_72790608_72791457_72791633_72792152_72792286_72797657_72797858_72799219_72799340_72800955_72801148_72801987_72802089_72803648_72803785_72803876_72804237_72806042_72806187_72807244_72807414_72807994_72808094_72808529_72808696_72813155_72813310_72813935_72814008_72815462
ENSMUSG00000055675.7_0	chr8	+	6963	2	FSM	ENSMUSG00000055675.7	ENSMUST00000069399.7	6973	2	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTGCTGTGTTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	15061031	15083330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_15061315_15076650
ENSMUSG00000055681.15_0	chr8	+	1285	10	FSM	ENSMUSG00000055681.15	ENSMUST00000066469.14	1300	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCGCTCTGCCTGATAC	NA	NA	NA	NA	NA	NA	NA	NA	70755176	70765634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355_70765431_70765508
ENSMUSG00000055681.15_11	chr8	+	705	8	FSM	ENSMUSG00000055681.15	ENST00000349893.8	724	8	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGTGAGCAGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	70755468	70765424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760599_70760654_70761144_70761227_70764277_70764347_70765355
ENSMUSG00000055681.15_12	chr8	+	908	9	FSM	ENSMUSG00000055681.15	ENST00000600932.5	920	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGAGCAGGGCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	70755464	70765427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70755583_70757283_70757347_70758284_70758386_70759148_70759302_70760559_70760654_70761144_70761227_70762985_70763142_70764277_70764347_70765355
ENSMUSG00000055692.22_0	chr16	+	1624	10	FSM	ENSMUSG00000055692.22	ENSMUST00000164950.11	1631	10	2	5	2	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATAGGTGTGTGGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	17093942	17096520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17094333_17094497_17094622_17094700_17094752_17094825_17094904_17095057_17095115_17095205_17095266_17095391_17095457_17095532_17095606_17095714_17095756_17095835
ENSMUSG00000055704.5_0	chr10	-	3249	1	FSM	ENSMUSG00000055704.5	ENSMUST00000069431.5	3273	1	22	2	22	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTCATTTTTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	78323654	78320405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78320400_78323700
ENSMUSG00000055707.14_0	chr8	-	2911	3	FSM	ENSMUSG00000055707.14	ENSMUST00000209415.2	2919	3	8	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTGTGACCTGTGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	70929592	70902868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70905504_70908115_70908299_70929499
ENSMUSG00000055707.14_2	chr8	-	2966	3	FSM	ENSMUSG00000055707.14	ENSMUST00000210250.2	2974	3	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTGCCACCAGTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	70929592	70902877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70905568_70908115_70908299_70929499
ENSMUSG00000055707.14_4	chr8	-	2982	3	FSM	ENSMUSG00000055707.14	ENSMUST00000066597.13	2991	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGAAGGATGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70929555	70902926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70905670_70908115_70908299_70929499
ENSMUSG00000055707.14_5	chr8	-	2918	2	ISM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	20258	-403	20258	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGGAAGGATGGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	70908290	70902926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_70905670_70908115
ENSMUSG00000055707.14_6	chr8	-	2729	2	FSM	ENSMUSG00000055707.14	ENSMUST00000166976.3	2734	2	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAAGGTGTCCCTTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	70929614	70903055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70905670_70929499
ENSMUSG00000055707.14_7	chr8	-	2608	3	FSM	ENSMUSG00000055707.14	ENSMUST00000209567.2	2615	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAGGTGAGGAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	70928548	70903336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70905670_70908115_70908299_70928456
ENSMUSG00000055717.14_0	chr14	+	1843	5	FSM	ENSMUSG00000055717.14	ENST00000314070.9	1858	5	9	6	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACGCATGAATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	103921680	103942347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_103921820_103923104_103923255_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_3	chr14	+	2095	6	FSM	ENSMUSG00000055717.14	ENST00000358679.3	2101	6	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCAATATCAGCTCACGC	NA	NA	NA	NA	NA	NA	NA	NA	103921759	103942336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_103921820_103923104_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_4	chr14	+	2034	5	ISM	ENSMUSG00000055717.14	ENST00000358679.3	2101	6	1349	3	3	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATATCAGCTCACGCAT	NA	NA	NA	NA	NA	NA	NA	NA	103923107	103942338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_103923255_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055717.14_5	chr14	+	2116	5	FSM	ENSMUSG00000055717.14	ENST00000351546.7	2132	5	10	6	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCACGCATGAATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	103923114	103942347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_103923335_103925497_103925840_103932603_103932760_103939952_103940275_103941271
ENSMUSG00000055720.11_0	chr9	+	1319	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216925.2	1319	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57818261	57837251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57818291_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_1	chr9	+	1361	11	FSM	ENSMUSG00000055720.11	ENSMUST00000163329.2	1364	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57818271	57837251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57818343_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_3	chr9	+	1413	11	FSM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCGTGTCCAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	57818329	57837249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_57818455_57819920_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055720.11_5	chr9	+	1286	10	ISM	ENSMUSG00000055720.11	ENSMUST00000216841.2	1426	11	1608	-2	1608	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCGTGTCCAGTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	57819924	57837251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_57820134_57821836_57821957_57826591_57826675_57827321_57827407_57827786_57827845_57828909_57829044_57829258_57829309_57829733_57829902_57830437_57830561_57836995
ENSMUSG00000055723.7_0	chr7	-	2261	6	FSM	ENSMUSG00000055723.7	ENSMUST00000069449.7	2275	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGACGACGCTTGACGGC	NA	NA	NA	NA	NA	NA	NA	NA	113717008	113646022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_113647487_113649535_113649655_113657774_113657884_113658161_113658265_113659566_113659655_113716630
ENSMUSG00000055725.12_0	chr5	-	2251	7	FSM	ENSMUSG00000055725.12	ENSMUST00000112969.10	2257	7	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTCATCCTCTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	97259426	97234838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_97236024_97243770_97243920_97245337_97245429_97247404_97247603_97251218_97251375_97256024_97256188_97259117
ENSMUSG00000055725.12_1	chr5	-	1853	3	FSM	ENSMUSG00000055725.12	ENSMUST00000112968.2	1875	3	15	7	-8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCTTCCAGAGGACCC	NA	NA	NA	NA	NA	NA	NA	NA	97259440	97250007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_97251375_97256024_97256188_97259117
ENSMUSG00000055737.13_0	chr15	-	4157	11	FSM	ENSMUSG00000055737.13	ENSMUST00000069451.11	4175	11	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGATCTTATGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	3612695	3347242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3350205_3350470_3350541_3355379_3355471_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
ENSMUSG00000055737.13_3	chr15	-	1141	9	FSM	ENSMUSG00000055737.13	ENSMUST00000110698.9	1171	9	16	14	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTAAAAATTAACAACAG	NA	NA	NA	NA	NA	NA	NA	NA	3612654	3357020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3357169_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3612481
ENSMUSG00000055737.13_8	chr15	-	1189	9	FSM	ENSMUSG00000055737.13	ENSMUST00000110697.9	1213	9	3	21	3	-21	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTCAAAATAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	3501123	3357041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3357169_3357455_3357625_3362828_3363008_3370400_3370574_3375990_3376015_3376953_3377084_3418129_3418196_3487411_3487491_3500881
ENSMUSG00000055760.13_0	chr17	+	1123	3	FSM	ENSMUSG00000055760.13	ENSMUST00000069486.13	1134	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAATCATATTTCTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	80531877	80535923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_80532100_80533049_80533194_80535166
ENSMUSG00000055762.17_0	chr15	-	2302	8	FSM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	10	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCTGCTCACCGACC	NA	NA	NA	NA	NA	NA	NA	NA	75781194	75766053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75781093
ENSMUSG00000055762.17_1	chr15	-	2185	7	ISM	ENSMUSG00000055762.17	ENSMUST00000154584.9	2312	8	8100	16	8015	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGGCGCATGGTGGTGCGG	NA	NA	NA	NA	NA	NA	NA	NA	75773104	75766069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980
ENSMUSG00000055762.17_16	chr15	-	895	7	FSM	ENSMUSG00000055762.17	ENSMUST00000116440.9	896	7	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCGCCTCTTGTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	75781146	75767337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773102_75781093
ENSMUSG00000055762.17_22	chr15	-	2134	10	FSM	ENSMUSG00000055762.17	ENSMUST00000089681.12	2152	10	12	6	-4	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCACTCCGCCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75781172	75767344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772539_75772612_75772980_75773105_75774527_75775658_75777734_75777750_75781093
ENSMUSG00000055762.17_7	chr15	-	1614	7	FSM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGAGAACCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	75781178	75766653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980_75773105_75781093
ENSMUSG00000055762.17_8	chr15	-	1526	6	ISM	ENSMUSG00000055762.17	ENSMUST00000109972.9	1624	7	8082	5	8018	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTAGAGAACCACCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	75773101	75766653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75767441_75767580_75767776_75768091_75768314_75768488_75768590_75768668_75768769_75772980
ENSMUSG00000055782.10_0	chr15	-	5498	10	FSM	ENSMUSG00000055782.10	ENSMUST00000069511.8	5532	10	15	19	15	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGTAAAAACAAATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	91075987	91030092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_91033409_91035857_91035984_91043306_91043392_91047256_91047403_91058793_91058940_91062433_91062529_91063278_91063445_91066883_91067006_91073037_91073219_91074872
ENSMUSG00000055799.14_0	chr6	-	3028	12	FSM	ENSMUSG00000055799.14	ENSMUST00000069536.12	3042	12	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGCAAGACCGTCTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72766231	72603368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72604777_72606938_72607015_72607994_72608103_72608197_72608358_72608938_72609080_72609909_72609994_72610198_72610302_72611082_72611216_72626102_72626187_72765193_72765322_72765544_72765609_72765692
ENSMUSG00000055809.8_0	chr7	-	2204	12	FSM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	19	1	19	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGTCTCCAGTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	4535433	4525932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185_4535275_4535376
ENSMUSG00000055809.8_1	chr7	-	2134	11	ISM	ENSMUSG00000055809.8	ENSMUST00000094897.5	2224	12	191	1	191	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCGGTCTCCAGTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	4535261	4525932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4526859_4526936_4527012_4527142_4527255_4529412_4529531_4529865_4529989_4530092_4530219_4530440_4530624_4530951_4531110_4533772_4533867_4534736_4534880_4535185
ENSMUSG00000055817.19_0	chr17	+	1713	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112350.8	1723	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGCCTTTGTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84013601	84100302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970
ENSMUSG00000055817.19_1	chr17	+	1722	14	FSM	ENSMUSG00000055817.19	ENSMUST00000112349.9	1728	14	5	1	5	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCCTTTGTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84013596	84100303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096346_84096472_84099081_84099231_84099970
ENSMUSG00000055817.19_14	chr17	+	2155	15	ISM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	6209	0	6209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATCTCTTGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84022047	84128111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84127608
ENSMUSG00000055817.19_4	chr17	+	2062	17	FSM	ENSMUSG00000055817.19	ENSMUST00000067826.15	2087	17	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGTCTGTAGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	84013635	84122325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84013715_84015827_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070342_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84122064
ENSMUSG00000055817.19_7	chr17	+	2217	16	FSM	ENSMUSG00000055817.19	ENST00000405592.5	2217	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTATCTCTTGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	84015838	84128111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84015896_84022042_84022137_84045757_84045885_84061282_84061347_84062987_84063106_84070339_84070443_84073935_84074036_84083010_84083200_84089330_84089406_84091705_84091765_84096349_84096472_84099081_84099231_84099970_84100194_84107478_84107566_84111879_84112027_84127608
ENSMUSG00000055826.6_0	chr7	-	828	1	FSM	ENSMUSG00000055826.6	ENSMUST00000069562.6	855	1	16	11	16	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATCAAAAGAGATGAGCG	NA	NA	NA	NA	NA	NA	NA	NA	24033345	24032517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24032500_24033300
ENSMUSG00000055835.11_0	chr8	+	1919	4	FSM	ENSMUSG00000055835.11	ENSMUST00000212072.2	1930	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGAGTGTTTTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	112370043	112397640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112370245_112385017_112385074_112392692_112392837_112396122
ENSMUSG00000055835.11_4	chr8	+	1804	4	FSM	ENSMUSG00000055835.11	ENSMUST00000077791.8	1811	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTGTTTTTGGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	112370144	112397643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112370245_112385017_112385074_112392709_112392837_112396122
ENSMUSG00000055835.11_5	chr8	+	1392	4	FSM	ENSMUSG00000055835.11	ENSMUST00000211926.2	1409	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATCTCAAAAAATTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	112370179	112397308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_112370245_112385017_112385074_112392751_112392837_112396122
ENSMUSG00000055839.7_0	chr17	-	528	4	FSM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	4380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTACTGCATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24048110	24043720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24043954_24046441_24046548_24047817_24047953_24048056
ENSMUSG00000055839.7_1	chr17	-	467	3	ISM	ENSMUSG00000055839.7	ENSMUST00000069579.7	537	4	165	9	8	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTACTGCATTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	24047945	24043720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24043954_24046441_24046548_24047817
ENSMUSG00000055839.7_2	chr17	-	269	2	FSM	ENSMUSG00000055839.7	ENST00000572954.1	300	2	18	13	18	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTTGGCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	24047935	24043802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24043954_24047817
ENSMUSG00000055850.13_0	chr6	-	1409	5	FSM	ENSMUSG00000055850.13	ENSMUST00000069580.12	1434	5	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	2007	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTACTAAAATACTC	NA	NA	NA	NA	NA	NA	NA	NA	72339407	72336713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72337626_72337857_72337933_72338099_72338210_72338394_72338523_72339223
ENSMUSG00000055862.8_0	chr10	+	1181	10	FSM	ENSMUSG00000055862.8	ENSMUST00000218184.2	1196	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTCTCATGAGGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	80538268	80541201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80538794_80538882_80538964_80539042_80539115_80539563_80539591_80539686_80539763_80539872_80539921_80540013_80540029_80540251_80540270_80540532_80540548_80540897
ENSMUSG00000055865.9_0	chr3	-	325	2	FSM	ENSMUSG00000105195.2	ENST00000369630.7	342	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGGTATTGAGACGGGT	NA	NA	NA	NA	NA	NA	NA	NA	104680499	104679501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104679683_104680355
ENSMUSG00000055884.9_2	chr12	+	7760	23	FSM	ENSMUSG00000055884.9	ENSMUST00000058889.5	7775	23	11	4	11	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGCATTAAAAAAAAAATTG	NA	NA	NA	NA	NA	NA	NA	NA	65122390	65178828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_65122952_65123815_65123989_65129805_65129884_65134931_65135091_65137692_65137825_65139129_65139263_65140426_65140544_65141644_65141732_65142494_65142680_65144075_65144283_65146021_65146227_65148334_65148487_65149335_65149492_65151801_65153666_65160547_65160634_65160729_65160793_65163106_65163239_65165057_65165215_65167250_65167358_65168303_65168865_65171587_65171961_65173288_65173581_65177048
ENSMUSG00000055897.14_0	chr2	-	4407	14	ISM	ENSMUSG00000055897.14	ENSMUST00000141051.8	4466	15	177	27	177	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	173501155	173421139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_173423090_173423764_173423907_173428789_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173458217_173501115
ENSMUSG00000055897.14_1	chr2	-	4379	13	ISM	ENSMUSG00000055897.14	ENSMUST00000141051.8	4466	15	43116	15	13127	-15	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	173458216	173421127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_173423090_173423764_173423907_173428789_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275
ENSMUSG00000055897.14_2	chr2	-	4439	15	FSM	ENSMUSG00000055897.14	ENSMUST00000141051.8	4466	15	0	27	0	-27	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAACAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	173501332	173421139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_173423090_173423764_173423907_173428789_173428909_173429625_173429715_173430959_173431044_173431297_173431468_173431580_173431742_173433909_173434015_173434594_173434808_173438832_173438981_173441382_173441481_173450525_173450673_173457275_173458217_173501115_173501161_173501305
ENSMUSG00000055897.14_6	chr2	-	2744	19	NNC	ENSMUSG00000055897.14	novel	2767	19	NA	NA	20	-4	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACCAAAGATACAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	173471323	173422995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_173423097_173423764_173423907_173426211_173426347_173427156_173427269_173429625_173429724_173430914_173431082_173431297_173431468_173431580_173431742_173432158_173432254_173434594_173434808_173436768_173437222_173438181_173438321_173438832_173438981_173440726_173440797_173441382_173441481_173450525_173450673_173457275_173457370_173458641_173458735_173471215
ENSMUSG00000055900.15_2	chr4	-	1939	5	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	116413116	116408829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_116409302_116409505_116409542_116409678_116410927_116411964_116412101_116413069
ENSMUSG00000055900.15_6	chr4	-	1944	5	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	17	0	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	116413115	116408829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_116409307_116409504_116409542_116409678_116410927_116411964_116412101_116413069
ENSMUSG00000055900.15_7	chr4	-	1937	4	NNC	ENSMUSG00000055900.15	novel	1962	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	116413127	116408829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_116409321_116409674_116410927_116411964_116412101_116413069
ENSMUSG00000055912.9_0	chr6	+	1535	8	FSM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72332435	72336740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_2	chr6	+	1473	7	FSM	ENSMUSG00000055912.9	ENSMUST00000132243.3	1478	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72332429	72336740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72332528_72333113_72333296_72333704_72333753_72334032_72334120_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055912.9_3	chr6	+	1445	7	ISM	ENSMUSG00000055912.9	ENSMUST00000069695.9	1546	8	682	5	682	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTCTGCAGTGTGTTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	72333111	72336740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_72333296_72333704_72333753_72334032_72334120_72334931_72335000_72335290_72335419_72335561_72335740_72335988
ENSMUSG00000055917.16_0	chr12	-	2416	13	FSM	ENSMUSG00000055917.16	ENSMUST00000069692.10	2438	13	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCCAATACCATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	40495757	40365050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40460574_40460953_40495664
ENSMUSG00000055917.16_1	chr12	-	2175	12	FSM	ENSMUSG00000055917.16	ENSMUST00000069637.15	2188	12	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATACCATTTTTACTTC	NA	NA	NA	NA	NA	NA	NA	NA	40495891	40365047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_40365903_40367089_40367265_40368533_40368577_40370600_40370698_40372528_40372597_40378673_40378807_40379483_40379595_40385282_40385375_40413132_40413216_40414080_40414170_40428671_40428874_40495664
ENSMUSG00000055923.17_0	chr5	-	3684	16	FSM	ENSMUSG00000055923.17	ENSMUST00000120963.8	3694	16	5	5	5	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAATTTGTCTGTGGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	77053356	77023786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77024270_77025373_77025506_77026250_77026374_77027756_77027921_77030113_77030910_77031932_77032049_77033976_77034170_77035034_77035208_77035876_77035984_77036439_77036682_77039449_77039643_77044223_77044538_77049007_77049129_77049764_77050033_77052055_77052228_77053269
ENSMUSG00000055926.4_0	chr2	+	3055	1	FSM	ENSMUSG00000055926.4	ENSMUST00000239130.2	3067	1	4	8	4	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTACAGAGTATGGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	119004993	119008048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119005000_119008000
ENSMUSG00000055932.16_0	chr8	+	2069	9	FSM	ENSMUSG00000055932.16	ENST00000636218.1	2086	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATAAAAATCTAAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	92040105	92252635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249547_92252041
ENSMUSG00000055932.16_13	chr8	+	160	2	FSM	ENSMUSG00000055932.16	ENST00000640179.1	167	2	4	3	4	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCGAGACACCAGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	92128436	92168374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_92128513_92168290
ENSMUSG00000055932.16_17	chr8	+	87	1	NIC	ENSMUSG00000055932.16	novel	2086	9	NA	NA	39855	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCGAGACACCAGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	92168287	92168374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_+_92168300_92168400
ENSMUSG00000055932.16_7	chr8	+	3548	9	FSM	ENSMUSG00000055932.16	ENSMUST00000069718.15	3564	9	6	10	-4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCCTAAGAGCGTCCGT	NA	NA	NA	NA	NA	NA	NA	NA	92040158	92395057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_92040249_92128434_92128513_92135850_92136470_92168290_92168435_92194944_92195025_92200936_92201081_92211786_92211907_92249399_92249525_92392909
ENSMUSG00000055943.6_0	chr2	+	5807	5	FSM	ENSMUSG00000055943.6	ENSMUST00000069747.6	5826	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATAATTTTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	112285350	112302497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_112285646_112289804_112289925_112293145_112293285_112295081_112295163_112297325
ENSMUSG00000055963.13_0	chr4	+	3530	5	FSM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGTCAACCCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	12906860	12983541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_12906939_12917915_12918066_12962944_12963024_12974729_12974816_12980404
ENSMUSG00000055963.13_5	chr4	+	3454	4	ISM	ENSMUSG00000055963.13	ENSMUST00000183345.2	3545	5	11056	12	11056	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATAAGTCAACCCAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	12917913	12983541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_12918066_12962944_12963024_12974729_12974816_12980404
ENSMUSG00000055980.3_0	chr1	-	9125	2	FSM	ENSMUSG00000055980.3	ENSMUST00000069799.3	9144	2	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGAACCCACAGATGTGC	NA	NA	NA	NA	NA	NA	NA	NA	82269129	82210832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_82215326_82264497
ENSMUSG00000055991.16_0	chr5	+	3781	6	FSM	ENSMUSG00000055991.16	ENSMUST00000085671.10	3794	6	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	145141377	145158553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145142519_145144385_145144519_145148555_145148639_145149314_145149451_145155096_145155694_145156862
ENSMUSG00000055991.16_1	chr5	+	3459	4	FSM	ENSMUSG00000055991.16	ENSMUST00000031601.8	3469	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGCTGACTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	145141480	145158553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_145142519_145144385_145144519_145155096_145155694_145156862
ENSMUSG00000056004.17_0	chr5	+	3015	20	FSM	ENSMUSG00000056004.17	ENST00000416314.5	3037	20	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGCAGACATAAACATATG	NA	NA	NA	NA	NA	NA	NA	NA	9430291	9529579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_9430399_9460583_9460732_9467984_9468072_9470616_9470723_9471504_9471658_9472301_9472391_9477689_9477871_9478404_9478534_9484620_9484712_9485326_9485430_9487705_9487844_9490719_9490984_9491633_9491808_9495363_9495554_9496893_9496991_9497719_9497822_9509179_9509307_9511321_9511501_9512868_9513035_9529195
ENSMUSG00000056014.16_0	chr5	+	3016	4	FSM	ENSMUSG00000056014.16	ENSMUST00000069862.11	3038	4	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAACTGTATTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	138621170	138647091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138621251_138634425_138634553_138637756_138637850_138644375
ENSMUSG00000056014.16_3	chr5	+	2937	3	ISM	ENSMUSG00000056014.16	ENSMUST00000069862.11	3038	4	13269	7	13269	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCAAACTGTATTGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	138634424	138647091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_138634553_138637756_138637850_138644375
ENSMUSG00000056031.14_0	chr9	-	1464	3	ISM	ENSMUSG00000056031.14	ENSMUST00000069896.7	1486	4	17	7	17	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTCTCCCCAGTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	85725321	85702300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_85703092_85705017_85705174_85724804
ENSMUSG00000056031.14_1	chr9	-	2551	3	FSM	ENSMUSG00000056031.14	ENSMUST00000185960.2	2557	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTACTTCTTGCTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	85726376	85702360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_85703092_85705017_85705179_85724717
ENSMUSG00000056050.16_0	chr1	-	6318	28	FSM	ENSMUSG00000056050.16	ENSMUST00000194543.4	6330	28	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTTCCCAGTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	183150888	183107687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_183108509_183109058_183109201_183110600_183110675_183110777_183110847_183111651_183111790_183111946_183112048_183112158_183112227_183112330_183112367_183112487_183112549_183113679_183113782_183114963_183115103_183115257_183115349_183115436_183115493_183116294_183116407_183116484_183116608_183117373_183117479_183117900_183117973_183119505_183119617_183119709_183119788_183120019_183120109_183120812_183120835_183125674_183125807_183132406_183132550_183135177_183135484_183137604_183140360_183143388_183143476_183146987_183147122_183150737
ENSMUSG00000056073.17_0	chr10	-	9400	17	FSM	ENSMUSG00000056073.17	ENSMUST00000218823.2	9427	17	17	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAAAATTTGCGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	49664845	48970938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_48977369_48989465_48989717_49008774_49009001_49116674_49116893_49120420_49120540_49148835_49149060_49232004_49232212_49280432_49280547_49295763_49295872_49298624_49298769_49399777_49399952_49404082_49404137_49411413_49411596_49449659_49449918_49454230_49454399_49659240_49659642_49664723
ENSMUSG00000056076.14_0	chr5	+	2933	19	FSM	ENSMUSG00000056076.14	ENSMUST00000100507.8	2945	19	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATGCTGTCCTGATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	140405093	140429114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_140405582_140411016_140411210_140412191_140412312_140412537_140412596_140412771_140412901_140413164_140413323_140415806_140415939_140416016_140416084_140416725_140416773_140418678_140418890_140422002_140422076_140423039_140423163_140424070_140424150_140425667_140425807_140426740_140426867_140427491_140427570_140427878_140427988_140428074_140428192_140428628
ENSMUSG00000056078.7_0	chr19	+	2682	10	FSM	ENSMUSG00000056078.7	ENSMUST00000025685.8	2711	10	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTTATTTTTGGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	34078355	34100081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_34078417_34078502_34078717_34086956_34087075_34089308_34089508_34090284_34090395_34093525_34093663_34093795_34093943_34095264_34095337_34096115_34096188_34098529
ENSMUSG00000056078.7_1	chr19	+	2616	9	ISM	ENSMUSG00000056078.7	ENSMUST00000025685.8	2711	10	170	11	170	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTTTATTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	34078502	34100076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_34078717_34086956_34087075_34089308_34089508_34090284_34090395_34093525_34093663_34093795_34093943_34095264_34095337_34096115_34096188_34098529
ENSMUSG00000056091.13_0	chr6	+	2247	7	FSM	ENSMUSG00000056091.13	ENSMUST00000069994.11	2258	7	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	72074585	72131554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72074767_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_3	chr6	+	2434	7	FSM	ENSMUSG00000056091.13	ENSMUST00000114112.4	2439	7	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGAGTGTTTGTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	72074610	72131554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72074979_72105247_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72126002_72126162_72130414
ENSMUSG00000056091.13_4	chr6	+	1312	5	FSM	ENSMUSG00000056091.13	ENST00000639119.1	1329	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACTGTACACACGTACT	NA	NA	NA	NA	NA	NA	NA	NA	72105255	72130967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72105372_72109035_72109148_72119123_72119468_72124052_72124240_72130414
ENSMUSG00000056116.19_0	chr17	-	1746	9	FSM	ENSMUSG00000056116.19	ENSMUST00000080015.12	1761	9	9	6	-6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGGTGTCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36353588	36349306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759_36353021_36353233
ENSMUSG00000056116.19_3	chr17	-	1675	10	FSM	ENSMUSG00000056116.19	ENSMUST00000077960.7	1694	10	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAGGTGTCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36353626	36349306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36349669_36349876_36349947_36350068_36350116_36350233_36350267_36351116_36351222_36351369_36351646_36352340_36352578_36352759_36353021_36353233_36353353_36353461
ENSMUSG00000056121.17_0	chr17	-	1919	8	FSM	ENSMUSG00000056121.17	ENSMUST00000070039.14	1939	8	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACACACTTCGGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	78725549	78685322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_78686175_78689036_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720292_78720402_78725261
ENSMUSG00000056121.17_13	chr17	-	1021	7	FSM	ENSMUSG00000056121.17	ENST00000405912.8	1042	7	11	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGAAAGGTGAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	78725509	78689046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_78689103_78692172_78692249_78708058_78708328_78710168_78710311_78712156_78712274_78720288_78720402_78725261
ENSMUSG00000056121.17_15	chr17	-	1123	8	FSM	ENSMUSG00000056121.17	ENST00000379245.8	1140	8	7	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTGAAAGGTGAGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	78725530	78689046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_78689103_78692172_78692249_78694419_78694501_78708058_78708328_78710168_78710311_78712156_78712274_78720288_78720402_78725261
ENSMUSG00000056124.6_0	chr18	-	5783	9	FSM	ENSMUSG00000056124.6	ENSMUST00000070080.6	5808	9	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGTGTGGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	20879444	20817663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUSG00000056124.6_3	chr18	-	2037	8	FSM	ENSMUSG00000056124.6	ENST00000237019.11	2051	8	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACACGGTTGTGTTTATAC	NA	NA	NA	NA	NA	NA	NA	NA	20878650	20820498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20833795_20833913_20839461_20839587_20853085_20853200_20878409
ENSMUSG00000056124.6_6	chr18	-	1218	8	FSM	ENSMUSG00000056124.6	ENST00000383131.3	1240	8	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATCCTTAATGTTTACA	NA	NA	NA	NA	NA	NA	NA	NA	20878588	20821255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20821526_20821991_20822094_20822277_20822401_20825448_20825637_20839461_20839587_20853085_20853200_20861018_20861136_20878409
ENSMUSG00000056131.14_1	chr9	-	2643	13	FSM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	6	17	6	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAACTATACAACTC	NA	NA	NA	NA	NA	NA	NA	NA	86453874	86436446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUSG00000056131.14_14	chr9	-	1910	12	FSM	ENSMUSG00000056131.14	ENSMUST00000072585.8	1920	12	9	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTCGATTGCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	86453872	86437054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_86437457_86438244_86438419_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254_86452461_86453782
ENSMUSG00000056131.14_2	chr9	-	2552	12	ISM	ENSMUSG00000056131.14	ENSMUST00000070064.11	2666	13	1417	19	1417	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAGAAACTATACAAC	NA	NA	NA	NA	NA	NA	NA	NA	86452463	86436448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_86437457_86438244_86438419_86439555_86439679_86440447_86440562_86441467_86441567_86443873_86443958_86444588_86444747_86446729_86446926_86447650_86447785_86449561_86449630_86451263_86451449_86452254
ENSMUSG00000056148.9_52	chr10	+	872	5	Fusion	ENSMUSG00000089789.2_ENSMUSG00000056148.9	novel	2698	4	NA	NA	251	-1711	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTCTATTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127595840	127626855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr10_+_127596044_127612591_127612667_127624476_127624736_127626057_127626222_127626684
ENSMUSG00000056148.9_64	chr10	+	839	4	FSM	ENSMUSG00000056148.9	ENSMUST00000052652.7	2698	4	148	1711	148	-1711	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTCTATTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127612421	127626855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127612667_127624476_127624736_127626057_127626222_127626684
ENSMUSG00000056153.16_0	chr18	-	6019	3	FSM	ENSMUSG00000056153.16	ENSMUST00000070116.12	6036	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACATCTGCCTTGTCATC	NA	NA	NA	NA	NA	NA	NA	NA	88912435	88883298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_88889043_88905332_88905458_88912285
ENSMUSG00000056153.16_1	chr18	-	2794	4	FSM	ENSMUSG00000056153.16	ENSMUST00000125362.8	2814	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATACCCAATTTAGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	88912466	88886628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_88889043_88905115_88905190_88905332_88905458_88912285
ENSMUSG00000056155.7_0	chr8	-	698	2	FSM	ENSMUSG00000056155.7	ENSMUST00000070102.6	730	2	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGAGCATGTCTTGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	84903155	84900367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84900602_84902691
ENSMUSG00000056162.15_0	chr18	-	2450	10	FSM	ENSMUSG00000056162.15	ENST00000358821.8	2469	10	8	11	8	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAACATTCCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	84656084	84628656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_84629810_84630875_84631024_84636278_84636412_84637633_84637806_84640276_84640438_84646920_84647006_84650010_84650212_84652676_84652766_84654171_84654335_84655939
ENSMUSG00000056167.9_0	chr9	-	2840	20	FSM	ENSMUSG00000056167.9	ENSMUST00000070117.8	2853	20	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	660	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATATGTTGCATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	114469129	114414945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_114415408_114420583_114420761_114422504_114422581_114426546_114426675_114426862_114426899_114427772_114427904_114430409_114430524_114439712_114439794_114442691_114442869_114444056_114444179_114446859_114447063_114448290_114448441_114451912_114452031_114454887_114454972_114455464_114455552_114456460_114456604_114458074_114458226_114460889_114461052_114461744_114461840_114468986
ENSMUSG00000056174.9_0	chr4	+	4319	4	FSM	ENSMUSG00000056174.9	ENSMUST00000070132.7	4332	4	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACACATGCTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	126180589	126208114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126180724_126190401_126190448_126203392_126203590_126204172
ENSMUSG00000056185.6_0	chr19	-	1676	13	FSM	ENSMUSG00000056185.6	ENSMUST00000070172.6	1703	13	17	10	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACAAGTCGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	5560549	5545311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5545677_5545924_5546011_5546085_5546246_5546343_5546431_5547013_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548423_5548535_5548747_5548853_5560360
ENSMUSG00000056185.6_1	chr19	-	1846	12	FSM	ENSMUSG00000056185.6	ENSMUST00000237111.2	1872	12	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACAAGTCGGCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	5560471	5545311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5546011_5546085_5546246_5546343_5546431_5547013_5547054_5547317_5547394_5547474_5547581_5547702_5547808_5547932_5548057_5548207_5548330_5548423_5548535_5548747_5548853_5560360
ENSMUSG00000056201.9_0	chr19	+	2332	4	FSM	ENSMUSG00000056201.9	ENSMUST00000209469.2	2354	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACTTTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5540495	5545220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5540631_5542524_5542833_5543182_5543260_5543408
ENSMUSG00000056204.9_0	chr8	-	4871	5	FSM	ENSMUSG00000056204.9	ENSMUST00000070173.9	4883	5	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGCATCCAGTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	71112377	71099085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71103436_71103831_71104065_71105054_71105172_71110077_71110131_71112259
ENSMUSG00000056209.8_0	chr19	-	874	6	FSM	ENSMUSG00000056209.8	ENSMUST00000070215.8	888	6	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTGTGTGGCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	45738018	45736174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45736491_45736602_45736720_45736984_45737079_45737188_45737309_45737495_45737582_45737877
ENSMUSG00000056211.14_0	chr1	+	3963	16	FSM	ENSMUSG00000056211.14	ENSMUST00000187900.7	3982	16	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACATAAAATCAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	128031065	128116579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_128031221_128079480_128079690_128080925_128081137_128089938_128089981_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494
ENSMUSG00000056211.14_1	chr1	+	4775	27	FSM	ENSMUSG00000056211.14	ENSMUST00000036288.11	4795	27	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTAGACCCACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	128031071	128165464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_128031221_128079480_128079690_128080925_128081137_128089938_128089981_128090505_128090596_128095629_128095745_128096715_128096795_128102685_128102746_128102828_128102970_128106619_128106729_128106823_128106920_128109453_128109492_128109574_128109626_128109722_128109950_128112136_128112392_128114494_128114647_128118374_128118477_128121196_128121494_128124710_128124835_128138941_128139097_128144137_128144290_128149336_128149441_128151205_128151379_128159059_128159205_128162802_128162886_128163278_128163364_128164133
ENSMUSG00000056214.10_0	chr18	+	3131	3	FSM	ENSMUSG00000056214.10	ENSMUST00000070219.9	3147	3	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTACCGTGTGTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	80090120	80162854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80090358_80123039_80123263_80160183
ENSMUSG00000056216.10_0	chr7	-	4676	2	FSM	ENSMUSG00000056216.10	ENSMUST00000130491.3	4709	2	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATGACCAGTTCTTATCA	NA	NA	NA	NA	NA	NA	NA	NA	34755972	34745853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34750358_34755800
ENSMUSG00000056220.15_0	chr1	-	2839	18	FSM	ENSMUSG00000056220.15	ENSMUST00000070200.15	2856	18	6	11	6	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTAGAAACTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	149837035	149705379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044_149778194_149797805_149797888_149808408_149808508_149836941
ENSMUSG00000056220.15_3	chr1	-	2745	17	ISM	ENSMUSG00000056220.15	ENSMUST00000070200.15	2856	18	28534	11	-10317	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACTAGAAACTTGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	149808507	149705379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_149705944_149716368_149716527_149717914_149718111_149727017_149727203_149733195_149733436_149736805_149736878_149740661_149740755_149740866_149741005_149747151_149747267_149748288_149748512_149755740_149755878_149761897_149762040_149763357_149763396_149776850_149776965_149778044_149778194_149797805_149797888_149808408
ENSMUSG00000056228.11_0	chr8	-	1888	15	FSM	ENSMUSG00000056228.11	ENSMUST00000049461.7	1902	15	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGGAACAGCCTGGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	11600777	11563984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_11564192_11564492_11564700_11566150_11566250_11567818_11567943_11568405_11568545_11568923_11568991_11576001_11576070_11579579_11579714_11580294_11580428_11587271_11587356_11591897_11592004_11592518_11592591_11597726_11597845_11600257_11600309_11600498
ENSMUSG00000056234.16_0	chr14	+	4055	10	FSM	ENSMUSG00000056234.16	ENSMUST00000163336.8	4065	10	7	3	7	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAGAAAAAGCTATCAC	NA	NA	NA	NA	NA	NA	NA	NA	31881828	31901809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31881968_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056234.16_5	chr14	+	3328	10	FSM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCATAATGGACACATC	NA	NA	NA	NA	NA	NA	NA	NA	31887747	31901189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_31887780_31892704_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056234.16_7	chr14	+	3290	9	ISM	ENSMUSG00000056234.16	ENSMUST00000111994.10	3343	10	4969	9	4969	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGGACACATCAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	31892716	31901195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_31892860_31894259_31894401_31894563_31894653_31894845_31894955_31895357_31895448_31896346_31896491_31897895_31898913_31899189_31899331_31899779
ENSMUSG00000056258.10_0	chr15	-	2422	12	ISM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	824	0	824	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACGATTGAACAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	65902495	65866742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_65867755_65869549_65869635_65871865_65871965_65874043_65874176_65876570_65876674_65877620_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962_65897119_65900473_65900647_65902367
ENSMUSG00000056258.10_1	chr15	-	2504	13	FSM	ENSMUSG00000056258.10	ENST00000521134.6	2512	13	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCACGATTGAACAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	65903311	65866742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_65867755_65869549_65869635_65871865_65871965_65874043_65874176_65876570_65876674_65877620_65877824_65892106_65892231_65893589_65893686_65895495_65895607_65896962_65897119_65900473_65900647_65902367_65902495_65903228
ENSMUSG00000056260.16_0	chr3	+	922	3	FSM	ENSMUSG00000056260.16	ENSMUST00000098751.10	929	3	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGATCCCCACTGGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	106592306	106643217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106592450_106641673_106641956_106642720
ENSMUSG00000056260.16_1	chr3	+	1644	3	FSM	ENSMUSG00000056260.16	ENSMUST00000106736.3	1669	3	16	9	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAAAGATGTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106629224	106643884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106629423_106641673_106641956_106642720
ENSMUSG00000056260.16_2	chr3	+	3086	4	FSM	ENSMUSG00000056260.16	ENSMUST00000098750.5	3103	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAAAGATGTATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106629262	106643884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106629423_106638978_106640459_106641673_106641956_106642720
ENSMUSG00000056267.15_0	chr9	+	2603	18	FSM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACGTAAGTGTCCCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	99125494	99182454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ENSMUSG00000056267.15_2	chr9	+	2114	16	FSM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCAATTCTTGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	99125515	99180032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_99125544_99128319_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
ENSMUSG00000056267.15_3	chr9	+	2539	17	ISM	ENSMUSG00000056267.15	ENSMUST00000093795.10	2606	18	2833	10	2812	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCCAAACGTAAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	99128327	99182447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631_99179747_99180555_99180636_99181780
ENSMUSG00000056267.15_4	chr9	+	2051	15	ISM	ENSMUSG00000056267.15	ENSMUST00000191335.7	2120	16	2839	6	2839	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACCAATTCTTGAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	99128354	99180032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_99128420_99136307_99136431_99144598_99144690_99144878_99145003_99145681_99145863_99157630_99157801_99159441_99159499_99159989_99160072_99160162_99160252_99163080_99163156_99171248_99171355_99173577_99173749_99178079_99178227_99178328_99178498_99179631
ENSMUSG00000056268.16_0	chr1	+	3033	22	FSM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAGCCCCTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	138893906	139098728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_138893969_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ENSMUSG00000056268.16_11	chr1	+	8062	21	FSM	ENSMUSG00000056268.16	ENSMUST00000094505.6	8073	21	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATCAAACATTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	138895459	139103772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_138895567_138950842_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ENSMUSG00000056268.16_12	chr1	+	2973	21	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	56934	5	55383	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAGCCCCTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	138950840	139098728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_138950887_138967737_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ENSMUSG00000056268.16_19	chr1	+	2929	20	ISM	ENSMUSG00000056268.16	ENST00000620048.6	3038	22	73829	5	72278	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGAAGCCCCTCAATGG	NA	NA	NA	NA	NA	NA	NA	NA	138967735	139098728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_138967788_138969661_138969782_138981083_138981154_138982278_138982360_138986804_138986865_138988012_138988067_138990598_138990710_139008910_139009012_139013620_139013667_139018191_139018294_139029705_139029832_139038121_139038224_139061408_139061500_139067118_139067160_139068189_139068259_139070571_139070629_139071630_139071739_139095408_139095495_139096569_139096787_139097493
ENSMUSG00000056270.4_0	chr3	-	1176	2	FSM	ENSMUSG00000056270.4	ENSMUST00000070284.4	1183	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGATTTCTGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	92031254	92029517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92030658_92031218
ENSMUSG00000056270.4_1	chr3	-	1134	1	ISM	ENSMUSG00000056270.4	ENSMUST00000070284.4	1183	2	610	0	610	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGATGTGATGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	92030644	92029510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_92029500_92030600
ENSMUSG00000056271.14_0	chr9	-	1667	13	FSM	ENSMUSG00000056271.14	ENSMUST00000093832.11	1685	13	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTCAGTTTTTGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	57528039	57514367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57514564_57515488_57515617_57516444_57516569_57517249_57517318_57518322_57518475_57519031_57519165_57519855_57519912_57520875_57521000_57521360_57521461_57522858_57522918_57523016_57523125_57523222_57523378_57527775
ENSMUSG00000056305.5_1	chr6	-	2227	13	FSM	ENSMUSG00000056305.5	ENSMUST00000070345.5	2244	13	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTCAGCTTGTGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	72322156	72295666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ENSMUSG00000056305.5_10	chr6	-	1414	10	ISM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	4428	0	4428	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72315534	72296047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375
ENSMUSG00000056305.5_7	chr6	-	1490	11	FSM	ENSMUSG00000056305.5	ENST00000450066.6	1493	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72319959	72296047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72296223_72296722_72296810_72298238_72298375_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315533_72319881
ENSMUSG00000056305.5_8	chr6	-	1678	12	FSM	ENSMUSG00000056305.5	ENST00000409766.7	1687	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCACCATGAAGGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	72322124	72296047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72296223_72296722_72296810_72302628_72302772_72305500_72305690_72306432_72306501_72310092_72310171_72313242_72313469_72314684_72314838_72315375_72315513_72316949_72317045_72319881_72319952_72321867
ENSMUSG00000056310.15_0	chr5	+	3031	16	FSM	ENSMUSG00000056310.15	ENSMUST00000040213.13	3044	16	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGACATGTTCCCATGC	NA	NA	NA	NA	NA	NA	NA	NA	130285886	130370402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130286035_130287773_130287896_130291659_130291783_130295823_130295926_130296735_130296931_130298006_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_18	chr5	+	1970	14	FSM	ENSMUSG00000056310.15	ENST00000359626.10	1978	14	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGGATCTCCAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130291737	130369690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130291783_130295823_130295926_130296735_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_28	chr5	+	1918	13	ISM	ENSMUSG00000056310.15	ENST00000359626.10	1978	14	4093	8	9	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGGATCTCCAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130295830	130369690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_130295926_130296735_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130310621_130310675_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056310.15_30	chr5	+	862	7	FSM	ENSMUSG00000056310.15	ENST00000612372.4	878	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCTTATCTGCAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	130295829	130328862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130295926_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744
ENSMUSG00000056310.15_36	chr5	+	1866	12	FSM	ENSMUSG00000056310.15	ENST00000620995.5	1882	12	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGGATCTCCAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	130295829	130369690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_130295926_130296735_130296935_130298011_130298289_130303461_130303585_130306773_130306892_130316083_130316203_130317693_130317804_130325464_130325643_130328744_130328881_130354439_130354551_130364086_130364255_130369459
ENSMUSG00000056313.6_0	chr8	-	1787	1	FSM	ENSMUSG00000056313.6	ENSMUST00000052622.6	1805	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGGCATAAGCCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	24928991	24927204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_24927200_24929000
ENSMUSG00000056328.15_0	chr11	+	6028	39	FSM	ENSMUSG00000056328.15	ENST00000226207.6	6031	39	0	3	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCTCGTCAGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	67090927	67115398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67090951_67092634_67092912_67092999_67093144_67093258_67093416_67094401_67094430_67095174_67095290_67095388_67095482_67095593_67095658_67096327_67096427_67096514_67096619_67096738_67096878_67097095_67097215_67097302_67097453_67098245_67098417_67099678_67099992_67100082_67100160_67101202_67101291_67101374_67101493_67101717_67101842_67101928_67102066_67102154_67102411_67104034_67104278_67104388_67104566_67105331_67105478_67105562_67105654_67105743_67106134_67106666_67106794_67108289_67108409_67108578_67108776_67110003_67110188_67110464_67110631_67110719_67110845_67111227_67111537_67111620_67111825_67112125_67112252_67112338_67112510_67112972_67113078_67113196_67113293_67115142
ENSMUSG00000056328.15_17	chr11	+	5995	38	ISM	ENSMUSG00000056328.15	ENSMUST00000075734.6	6012	39	1416	0	1416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTCGTCAGTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67092645	67115399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_67092912_67092999_67093144_67093258_67093416_67094401_67094430_67095174_67095290_67095388_67095482_67095593_67095658_67096327_67096427_67096514_67096619_67096738_67096878_67097095_67097215_67097302_67097453_67098245_67098417_67099678_67099992_67100082_67100160_67101202_67101291_67101374_67101493_67101717_67101842_67101928_67102066_67102154_67102411_67104034_67104278_67104388_67104566_67105331_67105478_67105562_67105654_67105743_67106134_67106666_67106794_67108289_67108409_67108578_67108776_67110003_67110188_67110464_67110631_67110719_67110845_67111227_67111537_67111620_67111825_67112125_67112252_67112338_67112510_67112972_67113078_67113196_67113293_67115142
ENSMUSG00000056342.17_0	chr11	+	12179	80	FSM	ENSMUSG00000056342.17	ENSMUST00000180046.8	12200	80	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTGCATAGTGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	23256908	23440553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23257017_23270660_23270749_23283438_23283860_23293319_23293371_23293510_23293661_23295149_23295218_23299150_23299344_23301591_23301654_23304844_23304927_23305005_23305099_23311278_23311405_23311586_23311717_23312576_23312613_23313057_23313189_23313790_23314513_23317338_23317554_23320238_23320355_23320443_23320572_23323320_23323411_23325000_23325097_23327554_23327638_23331224_23331380_23332553_23332668_23334400_23334501_23335012_23335173_23338433_23338561_23338663_23338812_23342841_23342943_23343751_23343962_23351452_23351579_23353559_23353683_23353811_23353896_23355866_23355954_23362214_23362416_23364735_23364819_23367462_23367504_23367648_23367774_23368978_23369132_23370039_23370145_23371097_23371154_23371245_23371367_23376061_23376246_23376634_23376796_23379299_23379366_23382245_23382393_23382477_23382535_23382618_23382697_23383179_23383275_23385906_23386080_23388866_23389021_23391099_23391179_23394146_23394201_23394305_23394402_23396431_23396497_23396578_23396655_23396743_23396792_23396917_23396984_23399212_23399294_23401995_23402082_23402518_23402688_23402790_23402866_23404524_23404677_23407797_23407847_23407931_23408037_23408114_23408160_23409123_23409229_23410561_23410710_23414216_23414852_23417145_23417304_23418804_23418884_23420288_23420416_23421481_23421590_23422949_23423055_23423169_23423295_23424265_23424390_23434101_23434182_23436817_23436959_23437078_23437223_23438208_23438369_23438583
ENSMUSG00000056359.7_0	chr12	-	643	4	FSM	ENSMUSG00000056359.7	ENSMUST00000221180.2	683	4	31	9	31	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTTTTAATGAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	73456300	73410857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_73411115_73418153_73418265_73443102_73443254_73456176
ENSMUSG00000056359.7_2	chr12	-	640	4	NNC	ENSMUSG00000056359.7	novel	683	4	NA	NA	36	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACATTTTTAATGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	73456295	73410859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_73411115_73418149_73418265_73443102_73443254_73456176
ENSMUSG00000056367.15_0	chr5	+	2016	11	FSM	ENSMUSG00000056367.15	ENSMUST00000128727.8	2031	11	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATCTTTATAACTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25964999	26055676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_25965127_26014782_26014908_26016914_26017026_26027402_26027499_26030105_26030214_26034523_26034668_26036608_26036783_26037383_26037477_26053359_26053486_26054070_26054155_26054848
ENSMUSG00000056383.11_0	chr7	-	2663	4	FSM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAAATTTCCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	41042684	41022354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41042650
ENSMUSG00000056383.11_1	chr7	-	2616	3	ISM	ENSMUSG00000056383.11	ENSMUST00000071804.10	2671	4	16401	8	16401	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATAAATTTCCTTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	41026283	41022354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_41024799_41025914_41025973_41026169
ENSMUSG00000056383.11_2	chr7	-	2043	5	FSM	ENSMUSG00000056383.11	ENSMUST00000205338.2	2071	5	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGTGGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41042784	41023222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_41024799_41025914_41025973_41026169_41026297_41037531_41037680_41042650
ENSMUSG00000056394.21_0	chr7	+	3073	28	FSM	ENSMUSG00000056394.21	ENSMUST00000098814.13	3091	28	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTACTTGGTGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	13012763	13045344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_13012886_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056394.21_13	chr7	+	3149	28	FSM	ENSMUSG00000056394.21	ENSMUST00000165964.10	3166	28	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGCCTACTTGGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	13013199	13045342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_13013400_13014073_13014148_13016378_13016469_13019182_13019319_13020483_13020611_13022589_13022686_13023319_13023422_13025112_13025239_13025381_13025458_13026064_13026146_13026384_13026442_13029307_13029481_13030153_13030321_13030645_13030723_13032662_13032755_13032965_13033066_13034187_13034274_13034856_13034973_13035309_13035406_13037109_13037221_13037725_13037798_13039835_13039981_13040137_13040221_13041443_13041597_13042395_13042450_13043037_13043182_13044933_13045027_13045120
ENSMUSG00000056411.3_0	chr3	+	2421	1	FSM	ENSMUSG00000056411.3	ENSMUST00000186471.2	2428	1	3	4	3	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTTGCACTGTTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	107992902	107995323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107992900_107995300
ENSMUSG00000056413.17_0	chr5	-	1205	11	FSM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCATAAACCCTAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	139311215	139258817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_139258832_139259089_139259319_139259489_139259562_139260201_139260265_139260483_139260565_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ENSMUSG00000056413.17_6	chr5	-	1193	10	ISM	ENSMUSG00000056413.17	ENST00000649206.1	1226	11	8	283	8	-283	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGGGGGCAGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	139311217	139259089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_139259319_139259489_139259562_139260201_139260265_139260483_139260565_139265263_139265411_139266459_139266573_139278890_139278974_139288058_139288151_139293496_139293628_139311035
ENSMUSG00000056429.5_0	chr6	-	4997	4	FSM	ENSMUSG00000056429.5	ENSMUST00000070524.5	5013	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATCAAAGCATTGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	72593974	72585421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72589094_72591054_72591139_72592506_72593433_72593659
ENSMUSG00000056457.7_0	chr13	-	839	5	FSM	ENSMUSG00000056457.7	ENSMUST00000099805.3	857	5	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	3667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	12814962	12805716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12805997_12806880_12807064_12808176_12808285_12811719_12811896_12814870
ENSMUSG00000056457.7_1	chr13	-	747	4	ISM	ENSMUSG00000056457.7	ENSMUST00000099805.3	857	5	3073	12	3073	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	12811895	12805716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_12805997_12806880_12807064_12808176_12808285_12811719
ENSMUSG00000056458.17_0	chr12	-	1653	12	FSM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	28	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCACCTTATGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110807345	110774243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110774556_110774638_110774840_110776342_110776458_110777038_110777213_110778212_110778315_110779948_110780128_110781401_110781451_110781564_110781644_110792875_110792947_110794474_110794565_110800559_110800675_110807179
ENSMUSG00000056458.17_2	chr12	-	218	2	FSM	ENSMUSG00000056458.17	ENST00000523231.5	229	2	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCAGGTGCAGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	110778309	110777054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110777176_110778212
ENSMUSG00000056458.17_4	chr12	-	121	1	ISM	ENSMUSG00000056458.17	ENSMUST00000070565.15	1693	12	30198	2823	1138	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCCAGGTGCAGAGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	110777175	110777054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110777100_110777200
ENSMUSG00000056459.15_1	chr12	-	441	3	FSM	ENSMUSG00000056459.15	ENST00000555424.1	451	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGGAGGGCTTCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	76402825	76358577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76358773_76396091_76396175_76402662
ENSMUSG00000056459.15_11	chr12	-	1656	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176278.8	1672	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCTATGAGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	76416365	76395723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76397048_76402662_76402843_76416213
ENSMUSG00000056459.15_3	chr12	-	2698	3	FSM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAAATTTCATTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	76403914	76394564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76397048_76402662_76402843_76403879
ENSMUSG00000056459.15_4	chr12	-	2653	2	ISM	ENSMUSG00000056459.15	ENSMUST00000176102.8	2707	3	1085	6	6	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAATTTCATTGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	76402829	76394561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_76397048_76402662
ENSMUSG00000056459.15_7	chr12	-	1650	3	FSM	ENSMUSG00000056459.15	ENSMUST00000167011.8	1681	3	23	8	23	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCAGAAGTTAATGTAG	NA	NA	NA	NA	NA	NA	NA	NA	76416215	76395681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76397048_76402662_76402843_76416111
ENSMUSG00000056481.8_0	chr19	+	2597	1	FSM	ENSMUSG00000056481.8	ENSMUST00000070630.8	2605	1	5	3	5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCAGGGGGAAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	5118110	5120707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5118100_5120700
ENSMUSG00000056486.19_0	chr2	-	4037	13	FSM	ENSMUSG00000056486.19	ENSMUST00000112024.10	4050	13	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGCTTTGAGCTGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	73605680	73441006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540831_73546707_73546764_73551746_73551786_73605366
ENSMUSG00000056486.19_10	chr2	-	2028	11	ISM	ENSMUSG00000056486.19	ENST00000409900.9	2070	12	5025	0	5025	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGGGACGAATAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	73546761	73442660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540827_73546703
ENSMUSG00000056486.19_26	chr2	-	1399	11	FSM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	0	12	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATGAAGGAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73551786	73443253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540827_73546703_73546764_73551746
ENSMUSG00000056486.19_27	chr2	-	1297	9	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	10960	14	10960	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATTAAAATGAAGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	73540826	73443255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798
ENSMUSG00000056486.19_28	chr2	-	1356	10	ISM	ENSMUSG00000056486.19	ENST00000409156.7	1411	11	5026	12	5026	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAATGAAGGAACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	73546760	73443253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73509958_73510248_73537262_73537377_73540798_73540827_73546703
ENSMUSG00000056486.19_8	chr2	-	2070	12	FSM	ENSMUSG00000056486.19	ENST00000409900.9	2070	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGGGACGAATAGCTA	NA	NA	NA	NA	NA	NA	NA	NA	73551786	73442660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_73443541_73445005_73445112_73448264_73448403_73454458_73454537_73455220_73455395_73462089_73462175_73490023_73490102_73509958_73510248_73537262_73537377_73540798_73540827_73546703_73546764_73551746
ENSMUSG00000056501.4_0	chr2	+	1491	1	FSM	ENSMUSG00000056501.4	ENSMUST00000070642.4	1504	1	6	7	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	388	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCTTTTGGGGGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	167530840	167532331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_167530800_167532300
ENSMUSG00000056515.10_0	chr17	-	3454	7	FSM	ENSMUSG00000056515.10	ENSMUST00000070673.9	3473	7	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	4063	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTTACTGAGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	66079736	65958731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_65961499_65974860_65974971_66003265_66003373_66004985_66005058_66024476_66024559_66029002_66029083_66079500
ENSMUSG00000056529.8_0	chr4	+	954	1	ISM	ENSMUSG00000056529.8	ENSMUST00000070690.8	3637	2	15212	2451	10	-2451	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAGCCGGAAGTGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	132306589	132307543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_132306600_132307500
ENSMUSG00000056529.8_1	chr4	+	972	2	NNC	ENSMUSG00000056529.8	novel	989	2	NA	NA	20	0	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	190	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACTATGGCGGAGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	132306599	132320584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_132307546_132320558
ENSMUSG00000056531.12_0	chr5	+	5322	29	FSM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAGGAACAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108280786	108381487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108280865_108283287_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ENSMUSG00000056531.12_15	chr5	+	5243	28	ISM	ENSMUSG00000056531.12	ENSMUST00000047677.9	5336	29	2507	9	2507	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGAGGAACAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	108283286	108381485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_108283431_108283838_108284011_108286779_108286939_108288724_108288832_108296776_108296906_108303624_108303722_108306390_108306513_108309332_108309625_108311513_108311639_108315874_108316030_108319478_108319700_108321616_108321728_108322731_108322864_108328263_108328399_108328679_108328758_108336797_108336915_108339748_108339917_108341566_108341710_108343861_108344026_108345622_108345837_108349190_108349291_108349930_108350048_108354460_108354605_108359959_108360164_108363852_108363991_108368563_108368765_108376445_108376914_108380599
ENSMUSG00000056536.15_0	chr1	-	6745	31	FSM	ENSMUSG00000056536.15	ENSMUST00000186485.7	6759	31	5	9	5	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAACTGGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	105591382	105446159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_105449853_105474388_105474442_105476789_105476833_105480096_105480171_105481788_105481865_105482168_105482225_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ENSMUSG00000056536.15_5	chr1	-	2995	26	FSM	ENSMUSG00000056536.15	ENSMUST00000190811.7	3015	26	12	8	-7	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGGAGGTGTATAAC	NA	NA	NA	NA	NA	NA	NA	NA	105591375	105484538	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_105484791_105485187_105485275_105485712_105485816_105493872_105493976_105507646_105507756_105512713_105512823_105515704_105515797_105516773_105516867_105516950_105517051_105519346_105519487_105525392_105525576_105526773_105526853_105565234_105565291_105565907_105566001_105568389_105568450_105572203_105572245_105574422_105574540_105575833_105575965_105577007_105577133_105580828_105580936_105583658_105583758_105584390_105584513_105585326_105585576_105586611_105586732_105587017_105587092_105591224
ENSMUSG00000056537.12_0	chrX	-	7414	5	FSM	ENSMUSG00000056537.12	ENSMUST00000121153.8	7439	5	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATCATTTGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	103024873	103000776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024668
ENSMUSG00000056537.12_1	chrX	-	7408	5	FSM	ENSMUSG00000056537.12	ENSMUST00000070705.6	7429	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGATCATTTGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	103024877	103000776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_103007650_103008856_103008941_103010096_103010287_103022878_103022941_103024678
ENSMUSG00000056569.12_0	chr1	+	1216	6	FSM	ENSMUSG00000056569.12	ENST00000526189.3	1234	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTCTCCCCCCCCCGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	170983101	170988113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170983218_170985929_170986097_170986321_170986455_170987066_170987203_170987342_170987404_170987510
ENSMUSG00000056579.19_0	chr11	-	141	1	FSM	ENSMUSG00002075304.1	ENSMUST00020182243.1	177	1	23	13	23	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAGAACCTACATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	3594929	3594788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3594800_3594900
ENSMUSG00000056579.19_1	chr11	-	223	1	FSM	ENSMUSG00002076556.1	ENSMUST00020182120.1	236	1	12	1	12	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGCAGTCAAGAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	3595509	3595286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3595300_3595500
ENSMUSG00000056579.19_3	chr11	-	136	1	FSM	ENSMUSG00002075685.1	ENSMUST00020183261.1	147	1	2	9	2	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGAACACAAACATATTT	NA	NA	NA	NA	NA	NA	NA	NA	3597323	3597187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_3597200_3597300
ENSMUSG00000056602.14_0	chr5	+	10605	61	FSM	ENSMUSG00000056602.14	ENSMUST00000239118.2	10618	61	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTGTATTTTTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	150218864	150421217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_150219150_150233734_150233935_150249595_150249650_150263817_150263958_150269017_150269109_150269315_150269396_150269510_150269592_150277938_150278108_150282263_150282357_150282454_150282554_150284579_150284682_150292933_150293038_150293591_150293701_150295986_150296074_150302273_150302446_150304262_150304396_150305080_150305189_150309449_150309709_150312237_150312421_150314100_150314188_150317442_150317703_150318452_150318643_150319207_150319333_150321662_150321721_150322663_150322756_150322996_150323170_150324257_150324419_150325064_150325176_150326906_150327062_150328407_150328508_150328714_150328887_150336648_150336906_150337968_150338116_150339652_150339822_150341926_150342018_150346174_150346258_150349665_150349817_150350492_150350597_150351517_150351704_150353190_150353390_150355133_150355256_150356981_150357170_150358233_150358329_150360165_150360798_150362175_150362274_150362950_150363122_150369238_150369380_150372884_150373065_150374523_150374686_150377964_150378040_150381209_150381381_150389708_150389907_150390249_150390412_150393141_150393309_150394885_150395076_150401390_150401541_150402237_150402337_150404957_150405042_150414542_150414654_150419158_150419362_150419631
ENSMUSG00000056608.15_6	chr8	+	11357	38	FSM	ENSMUSG00000056608.15	ENST00000447540.6	11395	38	32	6	32	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCCATGATGTCAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	91658906	91781133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91759966_91760873_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767820_91768685_91768908_91769469_91769599_91775733_91775839_91777730
ENSMUSG00000056608.15_9	chr8	+	10474	37	FSM	ENSMUSG00000056608.15	ENST00000615216.4	10493	37	12	7	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCATGATGTCAGCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	91658886	91781136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_91660491_91683010_91683343_91699752_91699865_91703548_91703696_91704107_91704177_91704255_91704312_91705509_91705628_91710089_91710177_91710895_91711034_91712686_91712809_91716057_91716302_91721087_91721265_91723467_91723612_91723704_91723961_91725123_91725335_91728247_91728444_91732341_91732510_91733158_91733339_91735347_91735459_91737239_91737437_91737883_91738084_91741726_91741887_91742462_91742553_91748393_91748498_91749442_91749561_91750164_91750223_91752007_91752051_91753295_91753516_91757109_91757313_91761532_91761694_91762953_91763227_91764034_91764204_91767675_91767820_91768685_91768908_91769469_91769599_91775733_91775839_91777730
ENSMUSG00000056612.8_0	chr19	+	981	4	FSM	ENSMUSG00000056612.8	ENSMUST00000070850.8	999	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1018	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGCTAACAGGCTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	6952344	6954683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6952875_6953911_6953996_6954225_6954259_6954349
ENSMUSG00000056629.17_0	chr19	-	568	5	ISM	ENSMUSG00000056629.17	ENSMUST00000238181.2	1526	6	1091	3	1091	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCCCAAGAGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6956527	6955117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340
ENSMUSG00000056629.17_1	chr19	-	633	6	FSM	ENSMUSG00000056629.17	ENSMUST00000070878.9	642	6	0	9	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCCCAAGAGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6957808	6955117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6957761
ENSMUSG00000056629.17_2	chr19	-	650	6	FSM	ENSMUSG00000056629.17	ENSMUST00000177752.9	664	6	8	6	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCCCCAAGAGTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	6957861	6955117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6957761
ENSMUSG00000056629.17_3	chr19	-	1496	6	FSM	ENSMUSG00000056629.17	ENSMUST00000238181.2	1526	6	15	15	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACCTTTAAAACCCC	NA	NA	NA	NA	NA	NA	NA	NA	6957603	6955129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956546_6956681
ENSMUSG00000056629.17_5	chr19	-	1629	6	FSM	ENSMUSG00000056629.17	ENST00000652762.2	1664	6	11	24	11	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6957788	6955145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6955303_6955378_6955415_6955757_6955805_6955925_6956039_6956340_6956510_6956681
ENSMUSG00000056632.9_0	chr18	+	6200	16	FSM	ENSMUSG00000056632.9	ENSMUST00000070892.8	6212	16	8	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAAAATTTAAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	20643338	20676437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_20643480_20652823_20652860_20653539_20653672_20654513_20654670_20655076_20655222_20656648_20656816_20657615_20657745_20658203_20658390_20660661_20660934_20662007_20662148_20664414_20664643_20666431_20666687_20669881_20670025_20670301_20670366_20671397_20671619_20672652
ENSMUSG00000056643.6_0	chr6	-	1645	3	FSM	ENSMUSG00000056643.6	ENSMUST00000070890.6	1653	3	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGGGCTTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	90302160	90285331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_90286790_90295240_90295324_90302056
ENSMUSG00000056648.6_0	chr11	+	718	2	FSM	ENSMUSG00000056648.6	ENST00000576562.1	743	2	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCGGGCCCGGACTAG	NA	NA	NA	NA	NA	NA	NA	NA	96173811	96175308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96174213_96174991
ENSMUSG00000056666.14_0	chr6	+	3016	11	FSM	ENSMUSG00000056666.14	ENSMUST00000070597.13	3027	11	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATGCTTTGATATCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	72575464	72585404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72575780_72577955_72578139_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000056666.14_3	chr6	+	1638	10	FSM	ENSMUSG00000056666.14	ENSMUST00000176364.8	1647	10	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATGTAGTCCGTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	72575610	72584355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72575780_72578458_72578701_72579637_72579840_72580636_72580835_72581848_72581969_72582954_72583094_72583367_72583478_72583555_72583723_72583856_72584017_72584224
ENSMUSG00000056671.8_0	chr18	-	852	7	FSM	ENSMUSG00000056671.8	ENSMUST00000235606.2	868	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	508	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACATCTATGCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	42084299	42008672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_42008919_42014277_42014351_42045434_42045541_42065665_42065827_42068232_42068307_42070698_42070757_42084165
ENSMUSG00000056679.14_0	chrX	-	4835	3	FSM	ENSMUSG00000056679.14	ENSMUST00000070316.12	4855	3	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATAAATCTTGCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	151151688	151126601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_151130705_151150416_151150507_151151046
ENSMUSG00000056687.10_0	chr11	-	2752	2	FSM	ENSMUSG00000056687.10	ENSMUST00000070956.4	2765	2	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGAGGAAGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	109254478	109245614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_109247820_109253931
ENSMUSG00000056692.14_0	chr17	-	3877	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114863.10	3892	5	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTGTGCGTGTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	28039585	27970209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27972970_27986884_27987214_28005044_28005243_28012882_28013038_28039150
ENSMUSG00000056692.14_1	chr17	-	3544	5	FSM	ENSMUSG00000056692.14	ENSMUST00000114859.9	3573	5	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACACACACAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28039507	27970239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27972970_27987109_27987214_28005044_28005243_28012882_28013038_28039150
ENSMUSG00000056698.12_1	chr6	-	2093	11	ISM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	3330	0	2634	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTCTGGTATTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	72571996	72542916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722
ENSMUSG00000056698.12_3	chr6	-	2118	12	FSM	ENSMUSG00000056698.12	ENSMUST00000070990.8	2122	12	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAATCTCTGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	72575326	72542920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556699_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72575304
ENSMUSG00000056698.12_6	chr6	-	1561	12	NIC	ENSMUSG00000056698.12	novel	1575	12	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACCACGGAGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	72574619	72543644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556695_72557283_72557353_72563427_72563498_72564593_72564669_72571722_72572004_72574426
ENSMUSG00000056698.12_7	chr6	-	1009	9	FSM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACCACGGAGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	72563494	72543644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556695_72557283_72557353_72563427
ENSMUSG00000056698.12_8	chr6	-	939	8	ISM	ENSMUSG00000056698.12	ENST00000393852.8	1015	9	6148	3	6148	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACCACGGAGAGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	72557349	72543644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_72543847_72545797_72545926_72546243_72546321_72552623_72552755_72554236_72554360_72554547_72554672_72556606_72556695_72557283
ENSMUSG00000056708.6_0	chr1	-	3251	1	FSM	ENSMUSG00000056708.6	ENSMUST00000055322.6	3276	1	18	7	18	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACTCAATTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	154975364	154972113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_154972100_154975400
ENSMUSG00000056724.16_0	chr9	-	8751	54	FSM	ENSMUSG00000056724.16	ENSMUST00000133191.8	8782	54	25	6	6	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTCGGTTTCTTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	110483204	110453862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110454295_110454396_110454533_110454801_110454951_110455030_110455190_110455284_110455402_110455603_110455699_110455800_110455974_110456145_110456256_110456336_110456427_110456874_110456992_110457059_110457158_110457254_110457373_110457461_110457572_110457686_110457818_110457945_110458087_110458183_110458309_110458637_110458734_110458837_110459155_110459257_110459422_110459851_110459988_110460068_110460194_110460409_110460568_110460687_110460838_110460925_110461271_110461357_110461496_110461802_110461963_110462044_110462224_110462749_110463266_110463431_110463518_110463780_110463941_110464113_110464273_110464365_110464520_110464681_110464785_110464928_110465089_110465362_110465497_110465629_110465805_110465958_110466052_110466142_110466226_110466431_110466754_110466946_110467067_110467159_110467293_110467372_110467975_110468361_110468461_110468847_110468932_110470478_110470560_110470838_110470946_110471078_110471362_110471452_110471539_110472779_110472863_110473076_110473196_110473287_110473370_110473484_110473614_110473697_110473787_110482964
ENSMUSG00000056735.6_0	chr5	+	1853	3	FSM	ENSMUSG00000056735.6	ENSMUST00000148466.2	1896	3	21	22	21	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATGTGATAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	123127437	123136386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123128155_123132425_123132596_123135420
ENSMUSG00000056737.15_0	chr6	+	1242	10	FSM	ENSMUSG00000056737.15	ENSMUST00000071044.13	1247	10	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72521378	72539966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72521450_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_16	chr6	+	1389	10	FSM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72526266	72539966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72526485_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_32	chr6	+	1171	9	ISM	ENSMUSG00000056737.15	ENSMUST00000114071.8	1400	10	6000	0	6000	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTGGCTTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	72532255	72539966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056737.15_8	chr6	+	1375	11	FSM	ENSMUSG00000056737.15	ENSMUST00000114072.8	1388	11	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTCCTGTGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	72521532	72539964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72521650_72521771_72521861_72532255_72532292_72532459_72532633_72532733_72532889_72533067_72533236_72534693_72534844_72535147_72535241_72535721_72535855_72538010_72538100_72539792
ENSMUSG00000056749.8_0	chr13	-	2005	2	FSM	ENSMUSG00000056749.8	ENSMUST00000071065.8	2026	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCACAGCTCCGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	53135095	53121251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_53123058_53134896
ENSMUSG00000056752.17_0	chr11	-	12596	66	FSM	ENSMUSG00000056752.17	ENST00000454412.6	12613	66	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTTTAAGAGTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	66047783	65722386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_65722613_65724924_65725315_65732067_65732251_65739082_65739254_65740701_65740894_65741829_65742022_65750232_65750361_65761745_65761895_65764948_65765143_65770986_65771110_65772453_65772625_65777440_65777582_65786666_65786832_65796022_65796228_65797665_65797789_65802616_65802853_65805861_65806051_65809549_65809670_65818409_65818836_65838294_65838556_65845642_65845877_65846030_65846193_65846466_65846610_65856458_65856583_65860791_65860955_65867162_65867360_65872011_65872174_65880540_65880781_65881258_65881362_65883529_65883696_65895827_65896036_65896484_65896659_65908190_65908366_65915961_65916110_65917811_65917921_65920159_65920288_65924648_65924860_65928274_65928563_65931089_65931229_65935451_65935610_65943826_65943932_65951794_65951952_65962767_65962929_65963566_65963807_65965869_65965996_65967137_65967291_65971320_65971448_65972079_65972211_65975439_65976311_65984830_65984998_65986062_65986286_65998699_65999125_65999215_65999413_66003077_66003214_66008234_66008477_66009538_66009795_66010420_66010548_66012651_66012721_66015938_66016054_66017424_66017576_66021389_66021507_66024374_66024543_66036064_66036299_66038018_66038231_66046242_66046374_66047645
ENSMUSG00000056753.4_0	chr8	-	1844	2	FSM	ENSMUSG00000056753.4	ENSMUST00000071067.4	1849	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAGGCCCTGTAGTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	84793911	84791864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84793433_84793635
ENSMUSG00000056758.15_0	chr10	-	3702	5	FSM	ENSMUSG00000056758.15	ENSMUST00000072777.14	3710	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGTGTGTGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120312366	120197179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_120200202_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ENSMUSG00000056758.15_3	chr10	-	3787	6	FSM	ENSMUSG00000056758.15	ENSMUST00000159699.2	3810	6	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGGTGTGTGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	120312351	120197179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_120200202_120206530_120206631_120210572_120210606_120298568_120298620_120309156_120309244_120311857
ENSMUSG00000056763.17_1	chr1	+	4347	30	FSM	ENSMUSG00000056763.17	ENSMUST00000071087.12	4355	30	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAACTACCAGTGTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	10108444	10206988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_10108570_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650_10137046_10145084_10145172_10147396_10147468_10152477_10152572_10153725_10153784_10155971_10156178_10158275_10158410_10159106_10159186_10160412_10160543_10166090_10166239_10174436_10174590_10178593_10178707_10182617_10182768_10183100_10183248_10183827_10183933_10186242_10186310_10186838_10186957_10196564_10196705_10197647_10197789_10200210_10200258_10202678_10202743_10203388_10203499_10204316_10204456_10206158
ENSMUSG00000056763.17_4	chr1	+	2145	7	FSM	ENSMUSG00000056763.17	ENSMUST00000118263.8	2162	7	8	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCACAGCACTCCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	10110005	10138192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_10110113_10115300_10115410_10117648_10117752_10128944_10129049_10134557_10134639_10135547_10135647_10136650
ENSMUSG00000056763.17_5	chr1	+	2511	8	FSM	ENSMUSG00000056763.17	ENSMUST00000122156.8	2535	8	18	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTCCATATGTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	10110015	10138552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_10110105_10115300_10115410_10117648_10117752_10128944_10129049_10130048_10130073_10134557_10134639_10135547_10135647_10136650
ENSMUSG00000056770.16_0	chr12	-	2740	13	FSM	ENSMUSG00000056770.16	ENSMUST00000071095.14	2755	13	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTGTTTTTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	108145564	108072695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108073938_108074815_108074977_108077480_108077567_108078388_108078556_108079577_108079653_108084500_108084616_108085364_108085424_108124012_108124270_108124534_108124608_108126491_108126641_108129231_108129325_108131321_108131432_108145411
ENSMUSG00000056820.8_0	chr8	+	2364	6	FSM	ENSMUSG00000056820.8	ENSMUST00000075896.7	2391	6	9	18	9	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1531	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATTAAAATACAGC	NA	NA	NA	NA	NA	NA	NA	NA	125739744	125760913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_125739952_125740248_125740354_125742393_125742509_125751245_125751377_125755506_125755635_125759235
ENSMUSG00000056832.15_0	chr6	+	4184	18	FSM	ENSMUSG00000056832.15	ENSMUST00000162554.8	4195	18	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTTCATGTTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	38358413	38404581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38358529_38359010_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ENSMUSG00000056832.15_5	chr6	+	1822	16	FSM	ENSMUSG00000056832.15	ENST00000343187.8	1833	16	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGATACTAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38359015	38402432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38359149_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38400284_38400419_38402062
ENSMUSG00000056832.15_7	chr6	+	1778	16	FSM	ENSMUSG00000056832.15	ENST00000430935.5	1792	16	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAATAGATACTAGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	38359018	38402432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_38359149_38362367_38362461_38364531_38364647_38366916_38366967_38368353_38368500_38371956_38372129_38375217_38375293_38377981_38378085_38380401_38380458_38381416_38381471_38382871_38382936_38386349_38386439_38387708_38387793_38388958_38389029_38398473_38398581_38402062
ENSMUSG00000056836.9_0	chr7	+	402	1	FSM	ENSMUSG00000056836.9	ENSMUST00000154478.3	395	1	-4	-3	-4	3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATGAAAGACTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	39840356	39840758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_39840400_39840800
ENSMUSG00000056851.15_0	chr15	+	2811	13	FSM	ENSMUSG00000056851.15	ENST00000437231.5	2830	13	15	4	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACAAGGAATAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102378988	102408491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_19	chr15	+	1543	14	FSM	ENSMUSG00000056851.15	ENSMUST00000229618.2	1576	14	13	20	-11	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	102379100	102407296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_38	chr15	+	3211	14	FSM	ENSMUSG00000056851.15	ENSMUST00000078404.15	3222	14	6	5	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACAAGGAATAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102381177	102408491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_4	chr15	+	2932	15	FSM	ENSMUSG00000056851.15	ENSMUST00000077037.13	2952	15	15	5	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACAAGGAATAAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	102378999	102408491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102379239_102381695_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102394382_102394476_102395522_102395565_102396639_102396713_102397210_102397250_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_49	chr15	+	996	12	FSM	ENSMUSG00000056851.15	ENST00000517662.1	996	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATCCATCTGTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	102381768	102406999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102381838_102382565_102382590_102382681_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056851.15_75	chr15	+	899	10	ISM	ENSMUSG00000056851.15	ENST00000517662.1	996	12	911	6	911	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCCATGATCCATCTGT	NA	NA	NA	NA	NA	NA	NA	NA	102382679	102406993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_102382715_102383009_102383127_102387050_102387183_102391594_102391724_102392600_102392676_102395522_102395565_102396639_102396713_102398186_102398243_102399068_102399239_102406923
ENSMUSG00000056870.10_0	chr1	+	3115	11	FSM	ENSMUSG00000056870.10	ENSMUST00000074525.10	3138	11	11	12	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	44590681	44835986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44591033_44728303_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_22	chr1	+	636	6	FSM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	1	6	1	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAAGACAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	44747775	44834238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44747839_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_25	chr1	+	571	5	ISM	ENSMUSG00000056870.10	ENST00000409805.5	643	6	64658	6	64658	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTTAAGACAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	44812432	44834238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056870.10_3	chr1	+	1005	7	FSM	ENSMUSG00000056870.10	ENST00000409637.7	1024	7	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGCAAAATGAGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	44591736	44805637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44591869_44609997_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173
ENSMUSG00000056870.10_5	chr1	+	2999	12	FSM	ENSMUSG00000056870.10	ENST00000359135.7	3021	12	10	12	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATTAAACTGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	44591737	44835986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44591869_44609997_44610121_44728322_44728376_44747776_44747839_44783633_44783706_44793502_44793602_44805173_44805312_44812430_44812548_44813212_44813306_44820127_44820267_44827607_44827703_44834109
ENSMUSG00000056888.12_0	chr10	-	1165	7	FSM	ENSMUSG00000056888.12	ENSMUST00000162508.9	1183	7	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAAAGAATTTCTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	111838519	111821370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_111821588_111821682_111821710_111822493_111822580_111824704_111824791_111829345_111829586_111832762_111833157_111838404
ENSMUSG00000056899.11_0	chr12	+	1151	7	NNC	ENSMUSG00000056899.11	novel	1147	7	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTTGTTTGGGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	41074088	42002370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_41074145_41074559_41074633_41118308_41118446_41160838_41160945_41675546_41675613_41750437_41750543_42001762
ENSMUSG00000056899.11_22	chr12	+	893	6	NNC	ENSMUSG00000056899.11	novel	977	6	NA	NA	89	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGATTGTGTGTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	41074416	42002025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_41074633_41118308_41118446_41160838_41160945_41675546_41675613_41750437_41750543_42001762
ENSMUSG00000056900.14_0	chr3	+	7567	21	FSM	ENSMUSG00000056900.14	ENSMUST00000072312.12	7580	21	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTCAGGTCCCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	32871702	32992215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32872022_32891984_32892111_32901958_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ENSMUSG00000056900.14_3	chr3	+	2757	21	FSM	ENSMUSG00000056900.14	ENSMUST00000108228.8	2767	21	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32871724	32987430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32872022_32891984_32892111_32901961_32902020_32908704_32908827_32915919_32916063_32919930_32920116_32931026_32931122_32935469_32935658_32940256_32940329_32940643_32940738_32948912_32949039_32956103_32956258_32959438_32959614_32965721_32965811_32968247_32968371_32969136_32969164_32969817_32969962_32971607_32971766_32973065_32973220_32985806_32985892_32987288
ENSMUSG00000056910.6_0	chr17	+	10103	6	FSM	ENSMUSG00000056910.6	ENSMUST00000042090.8	10110	6	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTATCCACAATATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	20565503	20603368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_20565908_20575892_20576188_20576519_20577312_20578000_20578214_20580585_20580710_20595093
ENSMUSG00000056917.14_0	chr19	-	3462	15	ISM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	525	10	525	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGCAAACAACTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	5711138	5701228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341
ENSMUSG00000056917.14_1	chr19	-	3568	16	FSM	ENSMUSG00000056917.14	ENSMUST00000169854.2	3583	16	2	13	2	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCAAACAACTCTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5713733	5701225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5713631
ENSMUSG00000056917.14_3	chr19	-	3563	17	FSM	ENSMUSG00000056917.14	ENSMUST00000164304.9	3584	17	2	19	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAGAAGAAGCAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	5713706	5701234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623_5711655_5713631
ENSMUSG00000056917.14_4	chr19	-	3493	16	FSM	ENSMUSG00000056917.14	ENSMUST00000236006.2	3513	16	7	13	7	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAGCAAACAACTCT	NA	NA	NA	NA	NA	NA	NA	NA	5711656	5701231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5711623
ENSMUSG00000056917.14_6	chr19	-	3713	16	ISM	ENSMUSG00000056917.14	ENSMUST00000080824.13	3741	17	777	13	777	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAGAAGAAGCAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	5712871	5701234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5701591_5701663_5701743_5701933_5701989_5702072_5702175_5702288_5702398_5702482_5702595_5702682_5702902_5704026_5704302_5704574_5705185_5705285_5705444_5705715_5705820_5706181_5706357_5709361_5709539_5709623_5709752_5710341_5711140_5712615
ENSMUSG00000056919.10_0	chr9	-	7672	27	FSM	ENSMUSG00000056919.10	ENSMUST00000093802.6	7685	27	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTTAGGAGTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	87137580	87071633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_87074976_87075625_87075761_87082033_87082133_87083750_87083893_87085693_87086338_87088895_87089109_87092849_87092955_87093709_87093874_87094904_87095032_87099120_87099227_87100557_87100671_87102503_87102645_87103150_87103379_87104096_87104228_87107731_87107994_87109206_87109481_87113430_87113513_87114031_87114224_87119885_87120003_87120406_87120438_87121867_87121987_87126330_87126399_87128201_87128386_87128668_87128816_87130427_87130552_87135984_87136102_87137315
ENSMUSG00000056938.17_0	chr11	+	1934	9	FSM	ENSMUSG00000056938.17	ENSMUST00000107040.10	1959	9	10	15	4	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAGAAAACCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	102992517	103003008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102992615_102993507_102993923_102994351_102994471_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_1	chr11	+	2058	10	NIC	ENSMUSG00000056938.17	novel	2075	11	NA	NA	5	-11	intron_retention	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAAACCTCAGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	102992518	103003012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_+_102992615_102993507_102993923_102994351_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996305_102996920_102997061_103002367
ENSMUSG00000056938.17_14	chr11	+	1733	9	FSM	ENSMUSG00000056938.17	ENST00000398322.7	1746	9	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTGGTTGCAGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	102993920	103002854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_102994471_102994725_102994847_102994918_102994999_102995258_102995380_102995628_102995716_102996070_102996142_102996228_102996305_102996920_102997061_103002367
ENSMUSG00000056941.18_1	chr2	-	3195	9	FSM	ENSMUSG00000056941.18	ENSMUST00000071852.10	3210	9	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCATTTTTTATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	153474692	153458858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474513
ENSMUSG00000056941.18_7	chr2	-	1330	10	FSM	ENSMUSG00000056941.18	ENSMUST00000109782.2	1343	10	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAGCTCTGAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	153474647	153460753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_153461433_153462365_153462415_153463689_153463740_153463963_153464055_153464570_153464609_153464691_153464749_153470384_153470488_153471112_153471167_153474107_153474183_153474513
ENSMUSG00000056962.12_0	chr11	-	1578	7	FSM	ENSMUSG00000056962.12	ENST00000445478.6	1590	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACGGCTCCCATAGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	116734200	116726714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116726904_116728461_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056962.12_1	chr11	-	1648	6	FSM	ENSMUSG00000056962.12	ENSMUST00000047616.10	1668	6	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTATACTGTGGACAG	NA	NA	NA	NA	NA	NA	NA	NA	116734263	116728265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116728590_116729815_116729955_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056962.12_2	chr11	-	1062	5	FSM	ENSMUSG00000056962.12	ENST00000585429.1	1075	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACATGTGGCCGCTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	116734009	116728458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_116728590_116731235_116731372_116731894_116732182_116733157_116733547_116733890
ENSMUSG00000056999.17_0	chr19	-	5038	25	FSM	ENSMUSG00000056999.17	ENSMUST00000131070.3	5059	25	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCGGTCTGCGCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37339996	37246148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_10	chr19	-	4172	24	FSM	ENSMUSG00000056999.17	ENST00000678673.1	4191	24	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCATGTGGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37340076	37246401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37246631_37246882_37248237_37248903_37248972_37249553_37249627_37253913_37253976_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000056999.17_9	chr19	-	4473	24	FSM	ENSMUSG00000056999.17	ENST00000677079.1	4491	24	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCATGTGGTGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	37340077	37246401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37246631_37246882_37248237_37253913_37253976_37255139_37255413_37257983_37258152_37261519_37261632_37262604_37262697_37264511_37264633_37265496_37265608_37268068_37268214_37273281_37273365_37275450_37275574_37281292_37281396_37287186_37287291_37289481_37289563_37290908_37291001_37291378_37291472_37292232_37292396_37292803_37292917_37295375_37295499_37302546_37302717_37306379_37306588_37307826_37308012_37339912
ENSMUSG00000057000.13_0	chrX	-	2951	19	FSM	ENSMUSG00000057000.13	ENSMUST00000080929.13	2978	19	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGGAACATTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134985989	134972859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_134974063_134974170_134974232_134974604_134974779_134975448_134975522_134976083_134976127_134976232_134976349_134976579_134976639_134976756_134976865_134977009_134977066_134977135_134977205_134977484_134977522_134978944_134979055_134979529_134979619_134979739_134979846_134980109_134980215_134980308_134980393_134981370_134981525_134981712_134981873_134985845
ENSMUSG00000057036.8_0	chr3	+	444	1	FSM	ENSMUSG00000057036.8	ENSMUST00000077389.8	444	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCACACCGGAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	24387231	24387675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_24387200_24387700
ENSMUSG00000057037.9_0	chr1	-	475	3	FSM	ENSMUSG00000057037.9	ENST00000476712.6	490	3	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACCAACCTGTATATGT	NA	NA	NA	NA	NA	NA	NA	NA	139485357	139481268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_139481434_139484069_139484199_139485176
ENSMUSG00000057054.12_0	chr11	-	1074	7	FSM	ENSMUSG00000057054.12	ENSMUST00000108542.8	1080	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGCGAGGTAGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	70590975	70579186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70586689_70586775_70590883
ENSMUSG00000057054.12_1	chr11	-	1240	8	FSM	ENSMUSG00000057054.12	ENSMUST00000108543.4	1255	8	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATAGTCTTGTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70590928	70579202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70579576_70579810_70579971_70580571_70580766_70581008_70581049_70581264_70581379_70584974_70585039_70586689_70586870_70590813
ENSMUSG00000057058.17_0	chr11	+	1499	13	FSM	ENSMUSG00000057058.17	ENSMUST00000103154.11	1507	13	8	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTATGGTGGGGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	96355426	96649767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_96355577_96380648_96380755_96416868_96416895_96432210_96432313_96593434_96593513_96594888_96594973_96599391_96599517_96601685_96601750_96603842_96604029_96614175_96614224_96621950_96622052_96644856_96644966_96649447
ENSMUSG00000057069.8_0	chr13	+	4228	16	FSM	ENSMUSG00000057069.8	ENSMUST00000071973.8	4239	16	9	2	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTTTTGTTTCTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	12580772	12624415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12621715
ENSMUSG00000057069.8_4	chr13	+	3321	16	FSM	ENSMUSG00000057069.8	ENSMUST00000220811.2	3341	16	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTCATTCCTTCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	12580802	12626279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12608388_12608401_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12624456
ENSMUSG00000057069.8_6	chr13	+	3317	15	NIC	ENSMUSG00000057069.8	novel	3341	16	NA	NA	6	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTCATTCCTTCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	12580794	12626279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_12581060_12589700_12589821_12594056_12594141_12595254_12595297_12596549_12596633_12598417_12598492_12605641_12605763_12605865_12605913_12610578_12610606_12614749_12614843_12614975_12615223_12616624_12616695_12617199_12617287_12619216_12619351_12624456
ENSMUSG00000057093.15_0	chr7	+	4595	6	FSM	ENSMUSG00000057093.15	ENSMUST00000120004.8	4612	6	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTGTGTCTGAGTGATC	NA	NA	NA	NA	NA	NA	NA	NA	27388777	27405905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27388912_27390639_27390721_27391906_27391960_27392906_27393034_27398077_27398177_27401804
ENSMUSG00000057098.15_0	chr11	+	2852	16	FSM	ENSMUSG00000057098.15	ENSMUST00000109268.2	2864	16	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATAAAAAGCAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44508150	44895817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44509140_44511240_44511398_44511993_44512058_44512747_44512804_44523577_44523652_44534227_44534297_44759918_44760001_44774640_44774759_44798730_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239_44882418_44883135_44883316_44886832_44887028_44895543
ENSMUSG00000057098.15_2	chr11	+	3399	16	FSM	ENSMUSG00000057098.15	ENSMUST00000101326.10	3422	16	7	16	7	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAACAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44508150	44896340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44509140_44511240_44511398_44511993_44512058_44512747_44512804_44523577_44523652_44534227_44534297_44759918_44760001_44774640_44774783_44798730_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239_44882418_44883135_44883316_44886832_44887028_44895543
ENSMUSG00000057098.15_23	chr11	+	1611	10	FSM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	4	20	4	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATTTACAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44759919	44895989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44760001_44774640_44774759_44798733_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239_44882418_44883135_44883316_44886832_44887028_44895543
ENSMUSG00000057098.15_29	chr11	+	1534	9	ISM	ENSMUSG00000057098.15	ENST00000380654.8	1635	10	14721	20	14721	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATTTACAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44774636	44895989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_44774759_44798733_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239_44882418_44883135_44883316_44886832_44887028_44895543
ENSMUSG00000057098.15_5	chr11	+	5970	16	FSM	ENSMUSG00000057098.15	ENSMUST00000081265.12	5981	16	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGCAGCTCCTAGTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	44508153	44898917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_44509140_44511240_44511398_44511993_44512058_44512747_44512804_44523577_44523652_44534227_44534297_44759918_44760001_44774640_44774783_44798733_44798865_44815275_44815403_44863690_44863780_44881342_44881409_44882239_44882418_44883135_44883316_44886832_44887028_44895543
ENSMUSG00000057101.9_0	chr7	+	3669	3	FSM	ENSMUSG00000057101.9	ENSMUST00000207002.2	3690	3	12	9	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAGAAGCAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	23781360	23807114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23781664_23784850_23784932_23803829
ENSMUSG00000057101.9_1	chr7	+	3861	5	FSM	ENSMUSG00000057101.9	ENSMUST00000068975.6	3901	5	21	19	-9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAAAAAGAAACAGAT	NA	NA	NA	NA	NA	NA	NA	NA	23781369	23807119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800872_23800994_23803829
ENSMUSG00000057101.9_3	chr7	+	3823	5	FSM	ENSMUSG00000057101.9	ENSMUST00000203854.3	3845	5	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAGAAGCAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	23781397	23807114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_23781664_23784850_23784932_23797245_23797321_23800877_23800994_23803829
ENSMUSG00000057103.12_0	chr6	-	977	2	FSM	ENSMUSG00000057103.12	ENSMUST00000239124.2	1008	2	26	5	26	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCAGATTCTAATGCATG	NA	NA	NA	NA	NA	NA	NA	NA	85892633	85887143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_85888003_85892515
ENSMUSG00000057110.16_0	chr2	+	7596	44	FSM	ENSMUSG00000057110.16	ENSMUST00000028237.15	7615	44	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGCAGGTTACCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	34999521	35068833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_34999642_35001566_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ENSMUSG00000057110.16_4	chr2	+	7071	43	ISM	ENSMUSG00000057110.16	ENSMUST00000113032.8	7085	44	1936	3	1936	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATACAGCCATGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	35001566	35068431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_35001815_35003335_35003467_35006683_35006815_35008066_35008209_35009948_35010136_35012671_35012866_35015987_35016108_35017316_35017543_35017939_35018050_35019632_35019828_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037246_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043168_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532_35050674_35050802_35050930_35051940_35052106_35052772_35052933_35055458_35055575_35055659_35055878_35057742_35057901_35059253_35059328_35060470_35060660_35061032_35061259_35061849_35062056_35063028_35063170_35065120_35065385_35065549_35065613_35066139_35066335_35068050_35068123_35068408
ENSMUSG00000057110.16_6	chr2	+	3380	18	FSM	ENSMUSG00000057110.16	ENST00000373847.5	3398	18	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTATGACAGCAGATACCT	NA	NA	NA	NA	NA	NA	NA	NA	35022232	35050927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_35022369_35023969_35024124_35025479_35025701_35027643_35027821_35030498_35030634_35033661_35033808_35034225_35034434_35035068_35035249_35037243_35037424_35038502_35038620_35038882_35039028_35039457_35039607_35041691_35041882_35043171_35043486_35045262_35045472_35047607_35047801_35050259_35050391_35050532
ENSMUSG00000057113.14_0	chr11	-	1615	11	FSM	ENSMUSG00000057113.14	ENSMUST00000075641.10	1633	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATACTTAAGAAAAAAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	33113197	33102295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_33102853_33103985_33104061_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057113.14_21	chr11	-	1138	10	FSM	ENSMUSG00000057113.14	ENSMUST00000109354.10	1157	10	10	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAATCAATAAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	33113067	33104935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_33105221_33106002_33106105_33106663_33106748_33106990_33107049_33109933_33109996_33110333_33110441_33110827_33110922_33111105_33111226_33111547_33111628_33112921
ENSMUSG00000057123.15_0	chr3	+	3658	4	FSM	ENSMUSG00000057123.15	ENSMUST00000199597.2	3668	4	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTCAGGTTCAGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	96812014	96984728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96812706_96879389_96879503_96957911_96959000_96982962
ENSMUSG00000057130.13_0	chr18	+	4064	4	FSM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTACTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	80250017	80269064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_80250117_80250368_80250559_80261918_80262023_80265393
ENSMUSG00000057130.13_8	chr18	+	3967	3	ISM	ENSMUSG00000057130.13	ENSMUST00000145963.9	4078	4	357	6	357	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTACTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	80250366	80269064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_80250559_80261918_80262023_80265393
ENSMUSG00000057132.17_0	chr14	+	5363	25	FSM	ENSMUSG00000057132.17	ENSMUST00000111603.10	5380	25	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAGGAAAAATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52348169	52398756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52348440_52349597_52349687_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363842_52366970_52366995_52368615_52368763_52371242_52371317_52374114_52374276_52376195_52376360_52378012_52378157_52378579_52378731_52382489_52382943_52383188_52383341_52384666_52385010_52386672_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ENSMUSG00000057132.17_2	chr14	+	4551	25	FSM	ENSMUSG00000057132.17	ENSMUST00000111600.11	4565	25	0	14	0	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAATCCTAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	52348395	52398782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52348440_52349597_52349687_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363842_52366970_52366995_52368615_52368763_52371242_52371317_52374114_52374276_52376195_52376360_52378012_52378157_52378579_52378698_52383188_52383341_52384666_52385010_52386672_52386831_52386956_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ENSMUSG00000057132.17_4	chr14	+	4485	24	ISM	ENSMUSG00000057132.17	ENSMUST00000111600.11	4565	25	1220	18	2	14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAATCCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	52349615	52398778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_52349687_52352098_52352241_52356652_52356892_52357929_52358030_52358449_52358579_52363735_52363842_52366970_52366995_52368615_52368763_52371242_52371317_52374114_52374276_52376195_52376360_52378012_52378157_52378579_52378698_52383188_52383341_52384666_52385010_52386672_52386831_52386956_52387089_52387344_52387549_52387814_52387951_52389659_52389776_52393609_52393803_52395826_52395912_52396831_52396963_52397562
ENSMUSG00000057133.15_1	chr2	-	10480	36	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	49048	1	49048	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAGGAAGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	160901894	160788898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838
ENSMUSG00000057133.15_2	chr2	-	10514	37	FSM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAAAGGAAGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	160950942	160788898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307_160894826_160901838_160901895_160950908
ENSMUSG00000057133.15_5	chr2	-	10419	35	ISM	ENSMUSG00000057133.15	ENSMUST00000039782.14	10515	37	56115	8	56115	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCTGGATTTAAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	160894827	160788905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_160792108_160798002_160798123_160798955_160799148_160801896_160802350_160803193_160803401_160803782_160803935_160807088_160808661_160809707_160809917_160811258_160811476_160812065_160812127_160819378_160819440_160821288_160821419_160823494_160823599_160824543_160824634_160824977_160825138_160825582_160825783_160826377_160826581_160830176_160830288_160832164_160832345_160834034_160834200_160850274_160850471_160854941_160855153_160856003_160856260_160859095_160859240_160859945_160860123_160861371_160861616_160862886_160863009_160867858_160867994_160868168_160868256_160871097_160871216_160871822_160871882_160872666_160872730_160881113_160881264_160883904_160884053_160894307
ENSMUSG00000057134.7_0	chr10	-	4540	1	FSM	ENSMUSG00000057134.7	ENSMUST00000075686.7	4558	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4012	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACGTAGAAATAATG	NA	NA	NA	NA	NA	NA	NA	NA	67384887	67380347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67380300_67384900
ENSMUSG00000057135.13_0	chr11	-	154	2	FSM	ENSMUSG00000057135.13	ENST00000571800.5	164	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1919	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGTAAGTGGAGGGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	70691630	70688842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70688899_70691532
ENSMUSG00000057137.10_0	chr6	+	2596	2	FSM	ENSMUSG00000057137.10	ENSMUST00000074949.4	2614	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGATCGAACTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34840089	34851872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34840276_34849462
ENSMUSG00000057147.14_0	chr2	-	2717	9	FSM	ENSMUSG00000057147.14	ENSMUST00000102542.10	2734	9	13	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTACAAGTTTTGTGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	114485432	114346904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_114348774_114350192_114350281_114353524_114353620_114366005_114366068_114398400_114398520_114399957_114400032_114475201_114475396_114478221_114478317_114485311
ENSMUSG00000057156.11_1	chr14	-	1395	3	FSM	ENSMUSG00000057156.11	ENST00000673724.1	1404	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTTGAAATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55101463	55094091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55094918_55095235_55095739_55101397
ENSMUSG00000057156.11_2	chr14	-	1754	2	FSM	ENSMUSG00000057156.11	ENST00000561013.2	1769	2	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTTTTTGAAATTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	55108445	55094091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55095739_55108338
ENSMUSG00000057163.4_0	chr6	+	810	5	FSM	ENSMUSG00000057163.4	ENSMUST00000070380.5	815	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTATGTTTGTCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	41498720	41502008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_41498778_41499750_41499911_41500788_41501043_41501386_41501524_41501806
ENSMUSG00000057163.4_3	chr6	+	742	4	ISM	ENSMUSG00000057163.4	ENSMUST00000070380.5	815	5	1038	8	1038	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTATGTTTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	41499758	41502005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_41499911_41500788_41501043_41501386_41501524_41501806
ENSMUSG00000057173.9_0	chr1	-	1633	11	FSM	ENSMUSG00000057173.9	ENST00000428343.6	1649	11	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATCCGTCTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	39757690	39704467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577
ENSMUSG00000057173.9_1	chr1	-	1846	14	FSM	ENSMUSG00000057173.9	ENST00000646446.1	1860	14	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATAATCCGTCTTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	39757690	39704467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39735057_39735122_39749317_39749405_39750537_39750600_39757577
ENSMUSG00000057173.9_7	chr1	-	1593	12	FSM	ENSMUSG00000057173.9	ENST00000646893.1	1613	12	14	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTGCAAGGTGGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	39760168	39704649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39704818_39709429_39709744_39711345_39711461_39717816_39717912_39720001_39720159_39722068_39722128_39722759_39722911_39724654_39724769_39727756_39727811_39729250_39729362_39757577_39757702_39760037
ENSMUSG00000057176.5_0	chr7	-	2530	9	FSM	ENSMUSG00000057176.5	ENSMUST00000072155.5	2536	9	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCATGCGTAGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	127187762	127181555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127182762_127183992_127184086_127184164_127184226_127184316_127184434_127184625_127184697_127185446_127185617_127185994_127186061_127186735_127186768_127187048
ENSMUSG00000057181.16_1	chr11	-	4536	10	FSM	ENSMUSG00000057181.16	ENSMUST00000103225.11	4554	10	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTAAAATATTAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	80268853	80251329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264524_80264899_80265044_80266332_80266459_80267628_80267710_80268667
ENSMUSG00000057181.16_2	chr11	-	4498	10	FSM	ENSMUSG00000057181.16	ENSMUST00000179332.8	4536	10	32	6	32	-5	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAGGCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	80268809	80251323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80254845_80255661_80255766_80258887_80259025_80259353_80259419_80261156_80261277_80264465_80264526_80264901_80265044_80266332_80266459_80267628_80267710_80268667
ENSMUSG00000057182.16_0	chr2	-	8893	28	FSM	ENSMUSG00000057182.16	ENST00000639244.1	8899	28	0	6	0	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTGCCCTAAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	65397665	65288242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298537_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338709_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356038_65356131_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65377518_65377720_65397609
ENSMUSG00000057182.16_37	chr2	-	6533	27	ISM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	19952	6	19951	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTGTAAATGAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	65377714	65290457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338805_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65377518
ENSMUSG00000057182.16_38	chr2	-	6596	28	FSM	ENSMUSG00000057182.16	ENST00000409101.7	6601	28	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTAAATGAAGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	65397666	65290456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_65292082_65295058_65295330_65297265_65297371_65298410_65298549_65299355_65299410_65300269_65300543_65302622_65302746_65312494_65312669_65313386_65313542_65314689_65314811_65325266_65325741_65327713_65328071_65329210_65329385_65336360_65336600_65337490_65337624_65338805_65339007_65344815_65345107_65351166_65351374_65352135_65352278_65354489_65354554_65354947_65355221_65356220_65356313_65356840_65356970_65359733_65359824_65361147_65361267_65366756_65367071_65377518_65377720_65397609
ENSMUSG00000057191.14_0	chr9	+	1283	7	FSM	ENSMUSG00000057191.14	ENSMUST00000086361.12	1310	7	16	11	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACCTAACTTTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	21437487	21456618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21437604_21440058_21440380_21447203_21447294_21450382_21450411_21451137_21451182_21451881_21451920_21455972
ENSMUSG00000057193.9_0	chr9	+	3458	22	FSM	ENSMUSG00000057193.9	ENSMUST00000217461.2	3478	22	13	7	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGACTGACCTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	21232006	21266317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21232148_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057193.9_19	chr9	+	2668	22	FSM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGCAGCCCTGGAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	21249738	21265272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264541_21264823
ENSMUSG00000057193.9_31	chr9	+	2618	21	ISM	ENSMUSG00000057193.9	ENST00000586078.5	2671	22	3340	2	3340	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCAGCCCTGGAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	21253078	21265273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264296_21264541_21264823
ENSMUSG00000057193.9_6	chr9	+	3440	22	FSM	ENSMUSG00000057193.9	ENSMUST00000034697.8	3456	22	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGACTGACCTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	21249135	21266317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21249259_21249736_21249786_21253074_21253149_21253234_21253320_21253478_21253564_21253690_21253802_21253893_21253955_21254038_21254163_21254259_21254344_21254430_21254544_21256127_21256260_21256588_21256689_21256774_21256868_21257204_21257290_21257984_21258248_21258330_21258426_21259178_21259283_21259370_21259445_21259623_21259695_21259833_21259923_21263762_21263848_21264977
ENSMUSG00000057219.12_0	chr11	+	2250	3	FSM	ENSMUSG00000057219.12	ENSMUST00000035240.7	2260	3	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTATTTGTGTGCTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	115366499	115381290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115366854_115366947_115367092_115379538
ENSMUSG00000057219.12_1	chr11	+	543	3	FSM	ENSMUSG00000057219.12	ENST00000581078.1	561	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACACTTAAAGATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	115366755	115379903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_115366854_115366947_115367028_115379538
ENSMUSG00000057228.7_0	chr8	+	1967	13	FSM	ENSMUSG00000057228.7	ENSMUST00000079472.4	1972	13	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTCATAAGTTACTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	60958965	60998706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_60959314_60960122_60960292_60969013_60969147_60971565_60971641_60979604_60979815_60982409_60982476_60984699_60984783_60985232_60985330_60987607_60987670_60988760_60988826_60993088_60993196_60996555_60996658_60998256
ENSMUSG00000057229.12_0	chr7	+	1458	6	FSM	ENSMUSG00000057229.12	ENSMUST00000077338.12	1465	6	1	6	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACCCTGTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25318839	25324970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25318886_25320320_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUSG00000057229.12_2	chr7	+	1408	5	ISM	ENSMUSG00000057229.12	ENSMUST00000085953.5	2387	6	1407	3	1407	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTACCCTGTGGCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	25320324	25324970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_25320518_25321768_25321850_25323223_25323364_25323451_25323615_25324139
ENSMUSG00000057229.12_3	chr7	+	369	3	FSM	ENSMUSG00000057229.12	ENST00000589970.5	369	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTGAAGGGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25321808	25324327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25321850_25323223_25323364_25324139
ENSMUSG00000057229.12_4	chr7	+	322	2	ISM	ENSMUSG00000057229.12	ENST00000589970.5	369	3	1421	0	1421	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTTGAAGGGTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25323229	25324327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_25323364_25324139
ENSMUSG00000057230.15_0	chr6	+	19317	21	FSM	ENSMUSG00000057230.15	ENSMUST00000089519.13	19341	21	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATTAAGAGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	86826511	86980194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86827198_86901995_86902115_86912411_86912521_86913923_86914067_86921338_86921461_86923085_86923168_86923842_86923976_86926523_86926628_86927762_86927843_86932085_86932241_86933240_86933555_86936013_86936257_86940974_86941208_86942458_86942617_86944250_86944356_86947972_86948069_86958277_86958380_86959523_86959626_86960793_86960905_86963245_86963357_86964185
ENSMUSG00000057234.10_0	chr2	-	1883	6	FSM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATTTATTTATTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	109108630	108922647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733_109105021_109108537
ENSMUSG00000057234.10_1	chr2	-	1789	5	ISM	ENSMUSG00000057234.10	ENSMUST00000081631.10	1894	6	3613	9	3613	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTATTTATTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	109105022	108922650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_108923643_108961829_108962009_108967685_108967878_109021896_109022034_109104733
ENSMUSG00000057234.10_6	chr2	-	1594	7	FSM	ENSMUSG00000057234.10	ENST00000406787.7	1617	7	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAAATTATGAGGATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	109111071	108923211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_108923643_108961829_108961965_108967685_108967878_109021896_109022034_109104733_109105021_109108537_109108763_109110884
ENSMUSG00000057236.11_0	chr4	-	4395	12	FSM	ENSMUSG00000057236.11	ENSMUST00000102598.4	4407	12	11	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1819	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATATTTTATGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	129229152	129200893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129203951_129211440_129211552_129211654_129211713_129212236_129212314_129214261_129214340_129215646_129215774_129215871_129216033_129216145_129216262_129216488_129216663_129222380_129222527_129228289_129228438_129229010
ENSMUSG00000057244.7_0	chr5	-	841	1	FSM	ENSMUSG00000057244.7	ENSMUST00000079261.7	882	1	32	9	32	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	129700903	129700062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_129700100_129700900
ENSMUSG00000057265.14_0	chr12	+	2180	12	FSM	ENSMUSG00000057265.14	ENSMUST00000081828.13	2187	12	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTTCAAACAAGCTGATC	NA	NA	NA	NA	NA	NA	NA	NA	84455844	84480547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84456030_84457810_84458040_84460037_84460104_84461347_84461492_84466747_84466829_84470206_84470278_84471909_84472055_84473481_84473976_84475116_84475219_84476778_84476854_84476992_84477108_84480074
ENSMUSG00000057278.9_0	chr6	+	1034	4	FSM	ENSMUSG00000057278.9	ENSMUST00000089558.7	1055	4	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAAGAAGCATGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	86348296	86356300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86348597_86352658_86352682_86353476_86353602_86355714
ENSMUSG00000057280.16_0	chr4	+	3333	14	NIC	ENSMUSG00000057280.16	novel	3352	15	NA	NA	5	-8	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCAGGCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58285969	58374294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344316_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_3	chr4	+	3363	15	FSM	ENSMUSG00000057280.16	ENSMUST00000179951.2	3376	15	5	8	2	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCAGGCTCTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	58285966	58374294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58327325_58327356_58333564_58333690_58344151_58344312_58353936_58354208_58355680_58355857_58356481_58356506_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_4	chr4	+	2795	13	FSM	ENSMUSG00000057280.16	ENST00000416899.7	2801	13	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGACCAGATAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	58285970	58373787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344316_58353943_58354208_58355680_58355857_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057280.16_9	chr4	+	3333	14	NIC	ENSMUSG00000057280.16	novel	3348	14	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCTGTGCTGACTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	58285971	58374302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr4_+_58286191_58293491_58293619_58296607_58296760_58301601_58301730_58303844_58303987_58333564_58333690_58344151_58344316_58353943_58354208_58355680_58355857_58356481_58356506_58366797_58366997_58367396_58367589_58368872_58369022_58373030
ENSMUSG00000057315.15_0	chr5	+	3327	10	FSM	ENSMUSG00000057315.15	ENSMUST00000094559.9	3346	10	11	8	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGTAGCTGTCAATGGT	NA	NA	NA	NA	NA	NA	NA	NA	102629267	103045795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_102629729_102699991_102700186_102811948_102812037_102989155_102989279_103008195_103008404_103023560_103023694_103026306_103026381_103028626_103028749_103039707_103040786_103044949
ENSMUSG00000057322.13_0	chr11	+	358	5	FSM	ENSMUSG00000057322.13	ENSMUST00000106602.10	371	5	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTTTTGTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	114559355	114563150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114559436_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUSG00000057322.13_5	chr11	+	353	5	FSM	ENSMUSG00000057322.13	ENSMUST00000077915.10	364	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTTTTGTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	114559377	114563150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114559453_114559606_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUSG00000057322.13_9	chr11	+	277	4	FSM	ENSMUSG00000057322.13	ENSMUST00000106599.8	457	4	173	7	156	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTGTTTTGTGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	114559607	114563150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_114559641_114559731_114559793_114562559_114562683_114563090
ENSMUSG00000057329.8_0	chr1	-	7153	2	FSM	ENSMUSG00000057329.8	ENSMUST00000112751.2	7191	2	31	7	31	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCACCAGTTGTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	106641973	106465914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_106471129_106640034
ENSMUSG00000057335.12_17	chr1	-	1017	7	FSM	ENSMUSG00000057335.12	ENST00000490813.5	1032	7	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACAATCTTGTTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	176577611	176563153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570117_176570215_176577491
ENSMUSG00000057335.12_3	chr1	-	6953	20	FSM	ENSMUSG00000057335.12	ENSMUST00000195717.6	6967	20	7	7	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTTATGCAATGATCATA	NA	NA	NA	NA	NA	NA	NA	NA	176641626	176561234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_176563548_176564409_176564462_176565093_176565188_176566646_176566736_176567484_176567656_176570066_176570215_176577491_176577727_176582731_176584550_176585962_176586084_176588916_176589067_176596798_176597093_176597278_176597437_176601999_176602477_176607826_176607962_176609816_176609977_176610062_176610122_176616032_176616112_176620101_176620192_176621070_176621216_176641461
ENSMUSG00000057342.16_0	chr7	-	3537	7	FSM	ENSMUSG00000057342.16	ENSMUST00000107737.11	3548	7	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTGAAAAAAGCTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	45367420	45358895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45366416_45366488_45367124
ENSMUSG00000057342.16_2	chr7	-	2564	6	FSM	ENSMUSG00000057342.16	ENSMUST00000210060.2	2577	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCGACATCCCTTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	45367313	45359690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45361236_45361481_45361598_45361680_45361776_45361879_45362030_45362683_45363153_45367124
ENSMUSG00000057346.13_0	chr15	-	1517	3	FSM	ENSMUSG00000057346.13	ENSMUST00000089452.6	1527	3	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77295225	77287989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77289283_77289780_77289907_77295127
ENSMUSG00000057346.13_2	chr15	-	1421	2	ISM	ENSMUSG00000057346.13	ENSMUST00000089452.6	1527	3	5326	1	5326	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77289908	77287989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_77289283_77289780
ENSMUSG00000057346.13_4	chr15	-	1514	3	FSM	ENSMUSG00000057346.13	ENSMUST00000081776.11	1530	3	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77295320	77287989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77289283_77289780_77289907_77295225
ENSMUSG00000057359.8_0	chr3	-	1791	2	FSM	ENSMUSG00000057359.8	ENSMUST00000072769.7	1800	2	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAGAACTGACATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	122087190	122049609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_122051184_122086973
ENSMUSG00000057363.13_0	chr1	-	4601	15	FSM	ENSMUSG00000057363.13	ENSMUST00000126008.8	4620	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTTACCTTGGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	43866949	43786133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844835_43846509_43846538_43866774
ENSMUSG00000057363.13_7	chr1	-	2019	15	FSM	ENSMUSG00000057363.13	ENST00000283148.12	2033	15	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCATCAGACATGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43866917	43788698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43789523_43792876_43792981_43794858_43794917_43796131_43796193_43799680_43799725_43804049_43804170_43810840_43810963_43813976_43814037_43819224_43819330_43829623_43829805_43836404_43836466_43844512_43844557_43844785_43844850_43846509_43846538_43866774
ENSMUSG00000057367.13_0	chr9	-	3320	8	FSM	ENSMUSG00000057367.13	ENSMUST00000190341.7	3331	8	2	9	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	7837056	7818236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505_7835381_7836990
ENSMUSG00000057367.13_1	chr9	-	3249	7	FSM	ENSMUSG00000057367.13	ENSMUST00000074246.7	3130	7	-119	0	-119	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTGTTTCTGATGTGA	NA	NA	NA	NA	NA	NA	NA	NA	7835375	7818236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821221_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057367.13_4	chr9	-	1673	7	FSM	ENSMUSG00000057367.13	ENST00000530675.5	1685	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTGAAGAATGGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	7834323	7818754	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_7818945_7819021_7819064_7819307_7819563_7820974_7821215_7825615_7825665_7826931_7827011_7833505
ENSMUSG00000057375.14_0	chr4	+	1308	10	FSM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTGTGTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	107171565	107217012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107171660_107172959_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057375.14_8	chr4	+	1218	9	ISM	ENSMUSG00000057375.14	ENSMUST00000075693.12	1321	10	1398	5	1398	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGTGTGTGTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	107172957	107217014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_107173040_107176138_107176303_107193310_107193392_107193633_107193722_107198182_107198300_107201708_107201876_107202205_107202389_107207610_107207736_107216803
ENSMUSG00000057378.16_0	chr2	-	15360	102	FSM	ENSMUSG00000057378.16	ENSMUST00000208151.2	15370	102	4	6	4	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTGTCATGTGCCACT	NA	NA	NA	NA	NA	NA	NA	NA	113047428	112461705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112462564_112463415_112463468_112465653_112465755_112466101_112466167_112466872_112467030_112468430_112468566_112470484_112470632_112470957_112471019_112471355_112471484_112471897_112471941_112475524_112475656_112477263_112477465_112479617_112479790_112480456_112480516_112482803_112484132_112484783_112484866_112486844_112486950_112490390_112490520_112491961_112492051_112492846_112492928_112493334_112493353_112493613_112493688_112496670_112496748_112498161_112498242_112498389_112498490_112499575_112499633_112500526_112500579_112500931_112501039_112502579_112502677_112505613_112505727_112506177_112506310_112508380_112508441_112508721_112508893_112516919_112517013_112517149_112517238_112539414_112539656_112542564_112542886_112548343_112548475_112559191_112559274_112560650_112560890_112563313_112563375_112563769_112563820_112581131_112581254_112582114_112582183_112583360_112583477_112585191_112585316_112585429_112585506_112586595_112586659_112586852_112587000_112587956_112588047_112591816_112591896_112593868_112594033_112594910_112595052_112596583_112596675_112603024_112603246_112606001_112606172_112608551_112608673_112610304_112610414_112611323_112611505_112624802_112624939_112630329_112630434_112631647_112631778_112633505_112633621_112634925_112635200_112656137_112656276_112657000_112657104_112661372_112661574_112663874_112664668_112666382_112666610_112667016_112667104_112672161_112672328_112674968_112675133_112676448_112676486_112677745_112677922_112679822_112680032_112689991_112690167_112690667_112690874_112692137_112692286_112694081_112694242_112696371_112696456_112697619_112697724_112699349_112699455_112705278_112705496_112716836_112717030_112731144_112731387_112732922_112733057_112738737_112738857_112740240_112740337_112740732_112740869_112742579_112742749_112752769_112752892_112757147_112757322_112777183_112777341_112779434_112779510_112784639_112784734_112787544_112787645_112788482_112788596_112794677_112794757_112797497_112797573_112826924_112827033_112858920_112859041_113047284
ENSMUSG00000057388.10_0	chr17	-	1199	4	FSM	ENSMUSG00000057388.10	ENSMUST00000079121.4	1219	4	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2042	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAAACTGTGAACCCTT	NA	NA	NA	NA	NA	NA	NA	NA	13135223	13130246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13130637_13132656_13132889_13134524_13134712_13134833
ENSMUSG00000057406.17_0	chr5	+	7125	23	FSM	ENSMUSG00000057406.17	ENSMUST00000075812.11	7142	23	10	7	-9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCTTTTTCTTACACT	NA	NA	NA	NA	NA	NA	NA	NA	33978078	34055303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33978222_33979002_33979073_34000455_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ENSMUSG00000057406.17_2	chr5	+	7785	9	FSM	ENSMUSG00000057406.17	ENSMUST00000114399.8	7786	9	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGGACTGGTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34000456	34034626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024920_34025003_34026097_34026223_34028750
ENSMUSG00000057406.17_3	chr5	+	6910	21	FSM	ENSMUSG00000057406.17	ENSMUST00000066854.14	6919	21	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGCCTTTTTCTTACACT	NA	NA	NA	NA	NA	NA	NA	NA	34000457	34055303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34001082_34003448_34003612_34011953_34012121_34012597_34013081_34018377_34018523_34022003_34022123_34024917_34025003_34026097_34026223_34036401_34036534_34037395_34037520_34038330_34038532_34039331_34039512_34039870_34040028_34040142_34040349_34042330_34042435_34042725_34042996_34044595_34044713_34048849_34048992_34049283_34049391_34050748_34050954_34052249
ENSMUSG00000057409.8_0	chr17	+	3046	5	FSM	ENSMUSG00000057409.8	ENSMUST00000233158.2	3065	5	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCATCATGAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	21709267	21730724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21709528_21711487_21711579_21720472_21720565_21725242_21725370_21728248
ENSMUSG00000057411.10_0	chr17	-	1304	5	FSM	ENSMUSG00000057411.10	ENSMUST00000072735.9	1321	5	10	7	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26011762	26009481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011026
ENSMUSG00000057411.10_1	chr17	-	621	5	FSM	ENSMUSG00000057411.10	ENSMUST00000236683.2	627	5	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26011357	26009481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545_26010651_26011304
ENSMUSG00000057411.10_2	chr17	-	557	4	ISM	ENSMUSG00000057411.10	ENSMUST00000236161.2	641	5	412	-3	412	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGACTTTTGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26010639	26009481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_26009753_26009906_26009958_26010319_26010461_26010545
ENSMUSG00000057421.13_0	chrX	-	2502	13	FSM	ENSMUSG00000057421.13	ENSMUST00000079987.13	2530	13	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAAACAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	95000506	94978955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUSG00000057421.13_2	chrX	-	2566	14	FSM	ENSMUSG00000057421.13	ENSMUST00000113864.3	2581	14	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAAACAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	95000519	94978955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_94979256_94980977_94981129_94983904_94984555_94990016_94990165_94990472_94990680_94991003_94991055_94991375_94991462_94993942_94994053_94994915_94994963_94995513_94995796_94996827_94996910_94998747_94998818_94999480_94999607_95000263
ENSMUSG00000057455.13_0	chr18	-	1164	5	FSM	ENSMUSG00000057455.13	ENST00000589109.5	1175	5	10	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCCTGTAAAGTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	31450160	31108031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_31108558_31286709_31286950_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057455.13_4	chr18	-	810	6	FSM	ENSMUSG00000057455.13	ENST00000590910.1	831	6	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAAACATGTTGTGAGG	NA	NA	NA	NA	NA	NA	NA	NA	31450116	31108347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_31108558_31286757_31286950_31317902_31317957_31345710_31345785_31376173_31376231_31449893
ENSMUSG00000057469.9_0	chr12	+	2388	7	FSM	ENSMUSG00000057469.9	ENSMUST00000020908.9	2418	7	13	17	13	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTATTAAAAAAATAGTG	NA	NA	NA	NA	NA	NA	NA	NA	16860990	16876736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_16861317_16866400_16866456_16868841_16869059_16870229_16870386_16872093_16872209_16874570_16874719_16875365
ENSMUSG00000057469.9_23	chr12	+	458	4	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	5116	7	5116	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTAGGTAGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	16866403	16872202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_16866456_16868917_16869059_16870229_16870386_16872093
ENSMUSG00000057469.9_34	chr12	+	406	3	ISM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	7630	7	7630	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTAGGTAGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	16868917	16872202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_16869059_16870229_16870386_16872093
ENSMUSG00000057469.9_9	chr12	+	490	5	FSM	ENSMUSG00000057469.9	ENST00000428850.2	497	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTAGGTAGCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	16861287	16872202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_16861317_16866400_16866456_16868917_16869059_16870229_16870386_16872093
ENSMUSG00000057497.9_0	chr6	+	1633	3	FSM	ENSMUSG00000057497.9	ENSMUST00000071492.9	1643	3	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTTCTTATGGGTAGT	NA	NA	NA	NA	NA	NA	NA	NA	86342636	86347039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86342802_86343591_86343733_86345712
ENSMUSG00000057506.6_2	chr19	-	867	5	FSM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	6	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAGGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	44134879	44127709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379_44134497_44134797
ENSMUSG00000057506.6_3	chr19	-	787	4	ISM	ENSMUSG00000057506.6	ENSMUST00000079033.6	885	5	387	12	384	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATTAAAAAGGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	44134498	44127709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_44128153_44130562_44130668_44131459_44131580_44134379
ENSMUSG00000057522.16_0	chr11	+	2881	11	FSM	ENSMUSG00000057522.16	ENSMUST00000107724.9	2881	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95304905	95384232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95304958_95305157_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057522.16_5	chr11	+	3042	10	FSM	ENSMUSG00000057522.16	ENSMUST00000107722.8	3063	10	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCCTGTCATTGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	95304944	95384232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95305231_95361347_95361492_95362048_95362171_95365056_95365209_95365310_95365439_95372739_95372918_95376117_95376174_95376662_95376786_95381110_95381254_95382522
ENSMUSG00000057530.15_0	chr4	+	4798	20	FSM	ENSMUSG00000057530.15	ENSMUST00000102518.10	4816	20	9	9	9	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCAAGAGCAGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	137589556	137692531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_137589693_137632380_137632467_137641078_137641166_137648331_137648474_137653529_137653743_137662571_137662694_137663968_137664116_137664649_137664716_137665934_137666127_137672327_137672471_137673565_137673681_137675854_137675966_137676757_137676857_137677466_137677545_137678808_137678913_137683768_137683880_137684445_137684514_137685309_137685501_137688953_137689050_137690040
ENSMUSG00000057531.15_1	chr13	-	1340	10	FSM	ENSMUSG00000057531.15	ENSMUST00000072329.15	1362	10	12	10	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAATAAACACTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	45155611	45075564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_45075931_45076624_45076769_45084471_45084628_45106647_45106671_45123521_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ENSMUSG00000057531.15_10	chr13	-	827	8	FSM	ENSMUSG00000057531.15	ENST00000338950.9	831	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGGGTAAGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45155467	45076632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160_45147215_45155392
ENSMUSG00000057531.15_11	chr13	-	751	7	ISM	ENSMUSG00000057531.15	ENST00000338950.9	831	8	8258	0	8097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGGGTAAGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45147213	45076632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45145494_45145546_45147160
ENSMUSG00000057531.15_12	chr13	-	776	7	FSM	ENSMUSG00000057531.15	ENST00000355917.7	780	7	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTGGGTAAGAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	45155467	45076632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_45076769_45084471_45084628_45123493_45123655_45136216_45136350_45139510_45139572_45147160_45147215_45155392
ENSMUSG00000057541.15_0	chr5	-	3382	16	FSM	ENSMUSG00000057541.15	ENSMUST00000119946.8	3407	16	17	8	17	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGAGTGCATGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23988692	23945653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23988509
ENSMUSG00000057541.15_11	chr5	-	3618	16	FSM	ENSMUSG00000057541.15	ENSMUST00000131992.8	3645	16	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAATATTCTAAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	23984542	23945666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23946975_23947341_23947434_23948414_23948545_23951423_23951526_23952791_23952919_23953680_23953842_23954802_23954865_23957259_23957386_23959455_23959585_23965219_23965298_23967360_23967473_23973765_23973911_23980666_23980769_23980881_23980967_23983070_23983498_23984110
ENSMUSG00000057551.11_0	chr9	+	3964	9	FSM	ENSMUSG00000057551.11	ENSMUST00000208694.2	3988	9	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	353	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGATTACAATGGGACTG	NA	NA	NA	NA	NA	NA	NA	NA	19533438	19561018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_19533582_19540392_19540503_19543629_19543685_19552361_19552551_19553259_19553400_19553893_19554021_19554904_19555001_19556520_19556604_19557997
ENSMUSG00000057554.14_0	chr13	-	2774	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099821.10	2792	10	11	7	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	12476608	12454304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307
ENSMUSG00000057554.14_1	chr13	-	2834	11	FSM	ENSMUSG00000057554.14	ENSMUST00000124888.8	2843	11	0	9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGGAATGAATACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	12479825	12454304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476307_12476620_12479776
ENSMUSG00000057554.14_10	chr13	-	2722	10	FSM	ENSMUSG00000057554.14	ENSMUST00000099820.10	2736	10	9	5	-1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTAAATTGGAATGAATA	NA	NA	NA	NA	NA	NA	NA	NA	12476375	12454309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12466281_12466309_12467602_12467660_12468165_12468286_12469615_12469827_12471224_12471314_12474054_12474198_12476121
ENSMUSG00000057554.14_20	chr13	-	1188	8	FSM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACATCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12474132	12455619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615_12469827_12471224_12471314_12474054
ENSMUSG00000057554.14_21	chr13	-	1059	7	FSM	ENSMUSG00000057554.14	ENST00000416919.6	1070	7	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGTACATTCAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	12474134	12455579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465843_12469590_12469827_12471224_12471314_12474054
ENSMUSG00000057554.14_25	chr13	-	1111	7	ISM	ENSMUSG00000057554.14	ENST00000352231.6	1193	8	2823	0	2823	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCAACATCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	12471314	12455619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_12455876_12462027_12462194_12463299_12463389_12465739_12465915_12468161_12468286_12469615_12469827_12471224
ENSMUSG00000057561.11_0	chr18	+	2007	4	FSM	ENSMUSG00000057561.11	ENSMUST00000238168.2	2012	4	4	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCATGAGAGGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	46730771	46742315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46730868_46731117_46731224_46731707_46731768_46740570
ENSMUSG00000057561.11_1	chr18	+	2850	3	FSM	ENSMUSG00000057561.11	ENSMUST00000078079.11	2865	3	6	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAATATCTAAATGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46730776	46743269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46730868_46731707_46731768_46740570
ENSMUSG00000057561.11_7	chr18	+	700	5	FSM	ENSMUSG00000057561.11	ENSMUST00000235849.2	726	5	1	25	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCGAAAAAAAAAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46730777	46749498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46730868_46731707_46731768_46740570_46740810_46748859_46748995_46749322
ENSMUSG00000057561.11_9	chr18	+	2749	2	FSM	ENSMUSG00000057561.11	ENSMUST00000235973.2	2651	2	916	-1014	627	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGACTTAGAGAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	46731707	46743259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46731768_46740570
ENSMUSG00000057572.16_0	chr4	+	3811	7	FSM	ENSMUSG00000057572.16	ENSMUST00000141235.8	3833	7	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGAGGAAAAAGCACTTC	NA	NA	NA	NA	NA	NA	NA	NA	129229496	129243651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129229933_129234520_129234546_129235269_129235392_129235533_129235617_129236913_129236967_129238004_129238042_129240596
ENSMUSG00000057594.13_0	chr11	-	898	5	FSM	ENSMUSG00000057594.13	ENSMUST00000076921.7	911	5	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTCTCCCACCAAGAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	120358414	120356264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120356648_120356809_120356926_120357479_120357594_120358007_120358067_120358188
ENSMUSG00000057594.13_7	chr11	-	539	4	FSM	ENSMUSG00000057594.13	ENST00000573715.2	550	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTATTGCTCTGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	120357585	120356521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120356648_120356809_120356926_120357048_120357240_120357479
ENSMUSG00000057604.10_0	chr6	+	1714	6	FSM	ENSMUSG00000057604.10	ENSMUST00000032376.6	1730	6	7	9	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACAACACTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	112250725	112307377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_112250934_112282009_112282099_112287446_112287703_112292536_112292873_112305623_112305840_112306768
ENSMUSG00000057604.10_1	chr6	+	1365	5	FSM	ENSMUSG00000057604.10	ENST00000397386.7	1383	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTCACACACACACAACA	NA	NA	NA	NA	NA	NA	NA	NA	112250812	112307371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_112250934_112282009_112282099_112292536_112292873_112305623_112305840_112306768
ENSMUSG00000057606.15_2	chr14	-	1415	16	FSM	ENSMUSG00000057606.15	ENST00000383786.9	1424	16	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1954	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGGGACAGTGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31299264	31246285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31246437_31247942_31248046_31250232_31250354_31250723_31250844_31251449_31251590_31257545_31257652_31261777_31261859_31265743_31265780_31265944_31265990_31266615_31266643_31267013_31267077_31269403_31269476_31271055_31271083_31271413_31271459_31275696_31275810_31299099
ENSMUSG00000057609.7_1	chr3	-	345	2	FSM	ENSMUSG00000057609.7	ENST00000326233.7	355	2	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGAGCAACTAACACTTT	NA	NA	NA	NA	NA	NA	NA	NA	92554474	92554041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92554099_92554186
ENSMUSG00000057609.7_12	chr3	-	316	1	ISM	ENSMUSG00000057609.7	ENSMUST00000074142.7	705	2	1140	317	9	-118	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGGCAGCAGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	92554474	92554158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_92554200_92554500
ENSMUSG00000057614.7_0	chr5	-	3108	8	FSM	ENSMUSG00000057614.7	ENSMUST00000074694.7	3135	8	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTTTACAAACCTATTG	NA	NA	NA	NA	NA	NA	NA	NA	18565335	18470141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_18472208_18476823_18476978_18478443_18478574_18494521_18494651_18496460_18496619_18513550_18513693_18513780_18513824_18565049
ENSMUSG00000057637.14_1	chr4	-	7292	10	FSM	ENSMUSG00000057637.14	ENSMUST00000105778.8	7304	10	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGAATCCCGAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	142939271	142833968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_142835956_142838203_142838348_142858279_142862670_142868693_142868805_142888625_142888753_142896605_142896759_142905857_142905962_142907446_142907562_142921230_142921305_142939184
ENSMUSG00000057637.14_5	chr4	-	392	4	FSM	ENSMUSG00000057637.14	ENST00000505823.5	400	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAGAGTGAGCATGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	142888677	142835870	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_142835956_142838203_142838348_142868693_142868805_142888625
ENSMUSG00000057637.14_6	chr4	-	332	3	ISM	ENSMUSG00000057637.14	ENST00000505823.5	400	4	19883	6	19883	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGTGAGCATGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	142868794	142835868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_142835956_142838203_142838348_142868693
ENSMUSG00000057649.7_0	chr13	+	2420	16	FSM	ENSMUSG00000057649.7	ENSMUST00000222399.2	2430	16	3	7	3	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	74085932	74109006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090812_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057649.7_3	chr13	+	2388	16	FSM	ENSMUSG00000057649.7	ENSMUST00000099384.4	2407	16	11	8	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGATCACCCCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	74085967	74109006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74086065_74086552_74086768_74086983_74087117_74088355_74088417_74088764_74088910_74090062_74090174_74090809_74090926_74092844_74092978_74094202_74094279_74095795_74095892_74098193_74098327_74099652_74099765_74102663_74102703_74103540_74103644_74105831_74106000_74108356
ENSMUSG00000057657.5_0	chr8	-	512	1	FSM	ENSMUSG00000057657.5	ENSMUST00000080443.8	456	1	-21	-35	-21	35	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATACCTATGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107989901	107989389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107989400_107989900
ENSMUSG00000057666.19_0	chr6	-	1406	7	FSM	ENSMUSG00000057666.19	ENSMUST00000118875.8	1420	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	37609	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACCTCTCCTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	125142726	125138820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_125139065_125139174_125139357_125139440_125139672_125139805_125140004_125140101_125140400_125142233_125142275_125142514
ENSMUSG00000057667.8_0	chr7	-	3179	2	FSM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCCTCCTGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	19242290	19238417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19241536_19242229
ENSMUSG00000057667.8_1	chr7	-	3107	1	ISM	ENSMUSG00000057667.8	ENSMUST00000077408.8	3188	2	768	7	768	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTCCTCCTGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	19241524	19238417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_19238400_19241500
ENSMUSG00000057672.17_0	chr8	-	6643	22	FSM	ENSMUSG00000057672.17	ENSMUST00000005616.16	6662	22	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCTAAACACTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	84425798	84393173	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUSG00000057672.17_10	chr8	-	3085	22	FSM	ENSMUSG00000057672.17	ENST00000242783.11	3095	22	10	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATACATGCATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84425800	84396732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84425595
ENSMUSG00000057672.17_11	chr8	-	2860	21	FSM	ENSMUSG00000057672.17	ENST00000342216.8	2882	21	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCATACATGCATTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	84419545	84396732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407914_84410023_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264
ENSMUSG00000057672.17_5	chr8	-	2965	22	FSM	ENSMUSG00000057672.17	ENSMUST00000144258.8	2995	22	22	8	22	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACATGCATTTTCAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	84420667	84396727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84396998_84397367_84397449_84397550_84397659_84397927_84398071_84398345_84398423_84398535_84398599_84398784_84398962_84399930_84400023_84400109_84400186_84400259_84400340_84404152_84404247_84404334_84404477_84404559_84404636_84407582_84407727_84407808_84407919_84410027_84410223_84410631_84410846_84411264_84411411_84413668_84413814_84417677_84417830_84419264_84419566_84420588
ENSMUSG00000057691.9_1	chr6	-	731	5	FSM	ENSMUSG00000057691.9	ENST00000461958.2	744	5	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAGCACCTCGACGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	48063460	48058679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48058703_48059087_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUSG00000057691.9_11	chr6	-	526	3	FSM	ENSMUSG00000057691.9	ENST00000513792.1	542	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAGGTGAAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	48060532	48059095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48059202_48060026_48060154_48060239
ENSMUSG00000057691.9_12	chr6	-	528	3	FSM	ENSMUSG00000057691.9	ENST00000463567.5	545	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCAGGTGAAGGGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	48063370	48059095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48059202_48060239_48060540_48063248
ENSMUSG00000057691.9_8	chr6	-	710	4	ISM	ENSMUSG00000057691.9	ENST00000461958.2	744	5	8	411	8	0	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGGGTTGGGAAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	48063462	48059087	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_48059202_48060026_48060109_48060239_48060540_48063248
ENSMUSG00000057706.8_0	chr7	+	3351	2	FSM	ENSMUSG00000057706.8	ENSMUST00000082237.7	3355	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAATGGTGCTACTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	82516540	82520719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_82517136_82517963
ENSMUSG00000057738.15_0	chr2	+	7949	56	FSM	ENSMUSG00000057738.15	ENSMUST00000113717.8	7958	56	6	3	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29855577	29921460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUSG00000057738.15_11	chr2	+	7870	56	FSM	ENSMUSG00000057738.15	ENSMUST00000095083.11	7883	56	10	3	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29855701	29921460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUSG00000057738.15_3	chr2	+	7817	55	FSM	ENSMUSG00000057738.15	ENSMUST00000046257.14	7820	55	0	3	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCTTTGCTCCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	29855694	29921460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUSG00000057738.15_9	chr2	+	7890	57	FSM	ENSMUSG00000057738.15	ENSMUST00000100225.9	7892	57	2	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAAGGCTTTGCTCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29855693	29921457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29855798_29868388_29868629_29870088_29870215_29873171_29873313_29873625_29873773_29876176_29876311_29876406_29876552_29876789_29876945_29878345_29878482_29880953_29881056_29881870_29882009_29882648_29882760_29883624_29883703_29883811_29883968_29884172_29884378_29885407_29885590_29886032_29886277_29886435_29886559_29886748_29886967_29888167_29888261_29889137_29889273_29889925_29890075_29891111_29891172_29892242_29892442_29893326_29893432_29893685_29893710_29894516_29894553_29896634_29896683_29897505_29897598_29897854_29898000_29898085_29898268_29900710_29900811_29900921_29901120_29901197_29901345_29903457_29903562_29903687_29903851_29904169_29904185_29905600_29905733_29905945_29906084_29907209_29907315_29908373_29908583_29909938_29910060_29910439_29910562_29911202_29911336_29912451_29912551_29914913_29915074_29915533_29915611_29916022_29916233_29916532_29916830_29917030_29917144_29917642_29917661_29919631_29919687_29920011_29920209_29920328_29920383_29920463_29920611_29920686_29920835_29920982
ENSMUSG00000057751.15_0	chr4	+	6851	37	FSM	ENSMUSG00000057751.15	ENSMUST00000030897.15	6851	37	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAGTCACAGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	154255186	154360170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154255600_154261495_154261631_154267114_154267225_154308557_154308681_154326858_154326982_154333883_154334010_154335278_154335402_154336585_154336709_154336880_154337019_154337482_154337603_154338171_154338295_154338565_154338737_154338998_154339131_154340452_154340582_154342557_154342687_154343316_154343452_154343537_154343673_154346970_154347097_154347626_154347759_154347849_154347979_154348102_154348235_154349526_154349656_154349743_154349873_154350116_154350246_154350590_154350720_154350907_154351037_154351646_154351776_154351889_154352019_154352112_154352245_154352390_154352520_154353032_154353162_154354103_154354233_154354349_154354479_154354858_154354988_154355079_154355209_154356067_154356197_154358264
ENSMUSG00000057766.15_0	chr18	-	3310	10	FSM	ENSMUSG00000057766.15	ENSMUST00000118525.9	3328	10	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATTGGGAAATTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12438849	12385431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12387759_12393990_12394090_12395168_12395265_12401506_12401606_12408762_12408862_12412746_12412846_12415359_12415459_12423773_12423873_12428935_12429047_12438667
ENSMUSG00000057766.15_2	chr18	-	1528	9	FSM	ENSMUSG00000057766.15	ENSMUST00000234183.2	1552	9	0	24	0	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	12438759	12387012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_12387759_12393990_12394090_12395168_12395265_12401506_12401606_12408762_12408862_12412746_12412846_12415359_12415459_12423773_12423873_12438667
ENSMUSG00000057778.15_0	chr11	-	2373	4	FSM	ENSMUSG00000057778.15	ENSMUST00000079681.6	2393	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCCACATTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	72686670	72668065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686338
ENSMUSG00000057778.15_2	chr11	-	2140	4	FSM	ENSMUSG00000057778.15	ENSMUST00000156294.8	2158	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACTGTAACTCCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	72686950	72668074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_72669779_72673473_72673661_72679902_72680044_72686842
ENSMUSG00000057788.14_1	chr8	-	2120	13	FSM	ENSMUSG00000057788.14	ENSMUST00000008004.10	2137	13	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACTGAGTTTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	70755131	70745524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70746338_70746477_70746550_70746648_70746738_70747336_70747412_70748016_70748115_70748224_70748302_70749032_70749109_70749552_70749694_70749780_70749969_70750525_70750648_70750730_70750817_70753628_70753753_70754972
ENSMUSG00000057789.15_0	chr17	-	2373	6	FSM	ENSMUSG00000057789.15	ENSMUST00000078691.12	2387	6	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACACCTCGCCTGGCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	27247973	27238787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27240010_27240140_27240322_27241412_27241557_27241715_27241852_27244766_27244868_27247384
ENSMUSG00000057835.8_0	chr17	-	1935	3	ISM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	10255	2	10255	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCATTCTCTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	56175675	56171893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_56173651_56175302_56175364_56175558
ENSMUSG00000057835.8_1	chr17	-	2016	4	FSM	ENSMUSG00000057835.8	ENSMUST00000079642.8	2018	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTCATTCTCTTGGATA	NA	NA	NA	NA	NA	NA	NA	NA	56185930	56171893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56173651_56175302_56175364_56175558_56175686_56185859
ENSMUSG00000057836.13_0	chrX	-	1638	9	FSM	ENSMUSG00000057836.13	ENSMUST00000074619.6	1645	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCAGACTTGTTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	72140701	72129907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_72130791_72130883_72130980_72133005_72133105_72134464_72134565_72135379_72135498_72136875_72136911_72137788_72137859_72138566_72138689_72140586
ENSMUSG00000057841.6_0	chr6	-	516	4	FSM	ENSMUSG00000057841.6	ENSMUST00000081840.6	517	4	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATGTTTTTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115785708	115782466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115782650_115783946_115784129_115784762_115784864_115785658
ENSMUSG00000057841.6_1	chr6	-	461	3	FSM	ENSMUSG00000057841.6	ENSMUST00000203816.2	906	3	451	-6	451	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCTATGTTTTTGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	115784858	115782466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115782650_115783946_115784129_115784762
ENSMUSG00000057842.15_0	chr13	-	3886	5	FSM	ENSMUSG00000057842.15	ENSMUST00000109735.9	3896	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTGTGTAAAAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	67480611	67461071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67462974_67464361_67466042_67468335_67468432_67468891_67469019_67480530
ENSMUSG00000057842.15_1	chr13	-	3809	4	ISM	ENSMUSG00000057842.15	ENSMUST00000109735.9	3896	5	11599	0	11552	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACACAAAACTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	67469012	67461061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67462974_67464361_67466042_67468335_67468432_67468891
ENSMUSG00000057858.9_0	chr19	-	2016	8	FSM	ENSMUSG00000057858.9	ENSMUST00000065286.2	2035	8	10	9	-1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAACTGATACCTGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	60215119	60187026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60187920_60188401_60188509_60201104_60201195_60208471_60208572_60208761_60208793_60208921_60209010_60209485_60209737_60214663
ENSMUSG00000057858.9_4	chr19	-	568	5	FSM	ENSMUSG00000057858.9	ENST00000554513.1	586	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGTGACCTTGCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	60209718	60187877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60187920_60188401_60188509_60201104_60201191_60208471_60208572_60209485
ENSMUSG00000057863.7_0	chr17	+	383	4	FSM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56920415	56921243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56920449_56920585_56920681_56920906_56921042_56921123
ENSMUSG00000057863.7_2	chr17	+	338	3	ISM	ENSMUSG00000057863.7	ENSMUST00000080492.7	383	4	182	0	182	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTTGTGTATGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	56920597	56921243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_56920681_56920906_56921042_56921123
ENSMUSG00000057880.13_0	chr16	+	1559	13	FSM	ENSMUSG00000057880.13	ENST00000425191.6	1566	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCATTGGTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8396100	8436619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_8396193_8400567_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057880.13_4	chr16	+	1469	12	ISM	ENSMUSG00000057880.13	ENST00000425191.6	1566	13	4472	0	4472	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCATTGGTTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8400565	8436619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_8400719_8406749_8406800_8418773_8418855_8420149_8420243_8421333_8421397_8421552_8421617_8423375_8423525_8426719_8426858_8428990_8429159_8431846_8431994_8433753_8433866_8436368
ENSMUSG00000057894.11_0	chr7	-	6718	2	FSM	ENSMUSG00000057894.11	ENSMUST00000072222.8	6727	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATGGACTCTGATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	12552785	12538917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12545594_12552743
ENSMUSG00000057894.11_1	chr7	-	6674	1	NIC	ENSMUSG00000057894.11	novel	2577	4	NA	NA	7192	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGGACTCTGATTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	12545589	12538915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_12538900_12545600
ENSMUSG00000057895.12_1	chr9	+	1715	2	FSM	ENSMUSG00000057895.12	ENST00000296092.7	1732	2	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAACAGAATGAGGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	122754116	122760134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122754362_122758664
ENSMUSG00000057897.15_0	chr11	-	2255	21	FSM	ENSMUSG00000057897.15	ENST00000350811.7	2289	21	13	21	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTGCAAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6015600	5919678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5920242_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932759_5937056_5937132_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_14	chr11	-	1376	15	ISM	ENSMUSG00000057897.15	ENST00000346990.8	1446	16	36582	0	36579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5978959	5921734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866
ENSMUSG00000057897.15_7	chr11	-	1649	20	FSM	ENSMUSG00000057897.15	ENST00000258682.10	1650	20	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015540	5921734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_8	chr11	-	1444	16	FSM	ENSMUSG00000057897.15	ENST00000346990.8	1446	16	2	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	6015539	5921734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866_5978962_6015473
ENSMUSG00000057897.15_9	chr11	-	1580	19	ISM	ENSMUSG00000057897.15	ENST00000258682.10	1650	20	36582	0	36579	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCCTCCCCTGGTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	5978959	5921734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_5921827_5922216_5922451_5922631_5922727_5922812_5922889_5929672_5929722_5931069_5931115_5932500_5932573_5932720_5932759_5938100_5938144_5938954_5939039_5939331_5939455_5939573_5939669_5940162_5940247_5940319_5940423_5942819_5942893_5947882_5947949_5951337_5951393_5965449_5965510_5978866
ENSMUSG00000057914.16_0	chr2	+	1868	12	FSM	ENSMUSG00000057914.16	ENST00000377319.8	1883	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCGTGCGTGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	14744346	14990882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_14744575_14879580_14879701_14963576_14963700_14965465_14965603_14968716_14968809_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057914.16_5	chr2	+	1681	12	FSM	ENSMUSG00000057914.16	ENST00000352115.10	1694	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACCGTGCGTGTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	14879585	14990882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_14879701_14963576_14963700_14965465_14965603_14968716_14968794_14973506_14973568_14976372_14976454_14976872_14976932_14979940_14980051_14986116_14986269_14987598_14987695_14989064_14989251_14990398
ENSMUSG00000057933.11_0	chr9	-	860	7	FSM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATATGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78254438	78238307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111_78249221_78254370
ENSMUSG00000057933.11_1	chr9	-	790	6	ISM	ENSMUSG00000057933.11	ENSMUST00000034902.12	870	7	5224	6	5224	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTATATGCTCCTCATAA	NA	NA	NA	NA	NA	NA	NA	NA	78249216	78238305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_78238532_78239368_78239501_78241042_78241185_78244840_78244974_78245926_78245979_78249111
ENSMUSG00000057948.13_0	chr11	-	3955	32	FSM	ENSMUSG00000057948.13	ENSMUST00000106450.8	4046	32	90	1	-70	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATCTATAGTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	115968486	115952921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115953630_115954464_115954662_115955068_115955193_115955370_115955492_115955586_115955671_115956124_115956197_115956267_115956374_115957515_115957596_115958656_115958726_115958870_115959078_115959201_115959301_115959488_115959633_115959940_115960062_115960183_115960315_115960391_115960444_115960527_115960626_115960706_115960764_115960846_115960938_115961060_115961186_115961255_115961374_115964210_115964315_115964394_115964488_115964609_115964715_115964867_115964938_115965063_115965133_115965225_115965271_115966530_115966712_115966933_115967001_115967095_115967156_115967267_115967376_115967577_115967614_115968273
ENSMUSG00000057963.10_0	chr12	-	2894	10	FSM	ENSMUSG00000057963.10	ENSMUST00000046518.12	2918	10	16	8	16	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGCATTCTGTACGTGG	NA	NA	NA	NA	NA	NA	NA	NA	102671173	102534848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102536744_102540180_102540344_102545363_102545432_102550545_102550712_102554154_102554196_102554722_102554822_102572347_102572466_102589558_102589685_102641701_102641727_102670980
ENSMUSG00000057969.16_0	chr9	-	3169	20	FSM	ENSMUSG00000057969.16	ENSMUST00000102532.10	3191	20	14	8	14	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACGACTACGCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	107486414	107475423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107484232_107484292_107486319
ENSMUSG00000057969.16_13	chr9	-	2862	18	FSM	ENSMUSG00000057969.16	ENSMUST00000102529.10	2875	18	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCTGACATTGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	107482595	107475560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482470
ENSMUSG00000057969.16_14	chr9	-	2946	19	FSM	ENSMUSG00000057969.16	ENSMUST00000102531.7	2958	19	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGCTGACATTGGAATGG	NA	NA	NA	NA	NA	NA	NA	NA	107486387	107475560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107486319
ENSMUSG00000057969.16_5	chr9	-	3403	21	FSM	ENSMUSG00000057969.16	ENSMUST00000102530.8	3410	21	1	6	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACATTGGAATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	107486397	107475557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483748_107484134_107484232_107484292_107486319
ENSMUSG00000057969.16_7	chr9	-	2978	19	FSM	ENSMUSG00000057969.16	ENSMUST00000073448.12	2987	19	4	5	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGACATTGGAATGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	107483851	107475557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107476375_107476775_107476916_107477001_107477058_107477148_107477307_107477528_107477571_107477652_107477745_107478026_107478247_107478556_107478702_107478782_107478853_107478958_107479071_107479158_107479305_107480072_107480193_107480320_107480415_107480495_107480616_107481005_107481069_107481241_107481400_107482167_107482355_107482645_107482787_107483754
ENSMUSG00000057982.9_0	chr9	+	1781	3	FSM	ENSMUSG00000057982.9	ENSMUST00000215902.2	1800	3	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGACCTAACTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22137028	22151391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22137129_22146315_22146443_22149837
ENSMUSG00000057982.9_1	chr9	+	1299	5	FSM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAACCTCCAGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	22137048	22150726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUSG00000057982.9_3	chr9	+	1418	6	FSM	ENSMUSG00000057982.9	ENSMUST00000072465.9	1425	6	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	22137069	22154646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_22137129_22146315_22146443_22147497_22147591_22148970_22149081_22149837_22150550_22154329
ENSMUSG00000057982.9_5	chr9	+	1350	5	ISM	ENSMUSG00000057982.9	ENSMUST00000072465.9	1425	6	9258	4	9258	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGTTGCCTTGGTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	22146324	22154646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_22146443_22147497_22147591_22148970_22149081_22149837_22150550_22154329
ENSMUSG00000057982.9_6	chr9	+	1212	4	ISM	ENSMUSG00000057982.9	ENSMUST00000215618.2	1313	5	9267	21	9248	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGTAATAAAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	22146314	22150718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_22146443_22147497_22147591_22148970_22149081_22149837
ENSMUSG00000057990.5_0	chr19	-	459	1	FSM	ENSMUSG00000057990.5	ENSMUST00000075293.5	494	1	25	10	25	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTCTAATTTCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	16142144	16141685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_16141700_16142100
ENSMUSG00000058006.13_0	chr4	+	17952	102	FSM	ENSMUSG00000058006.13	ENSMUST00000178134.2	17959	102	6	1	6	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGTTTGGCTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	32657124	32775216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_32657353_32662832_32663060_32666392_32666618_32667090_32667199_32667271_32667465_32668798_32669042_32669462_32669595_32670566_32670671_32671515_32671631_32672830_32673016_32673953_32674036_32674930_32675027_32676741_32676855_32678298_32678448_32679530_32679592_32683542_32683755_32684638_32684740_32685658_32685804_32686327_32686425_32689482_32689597_32691179_32691328_32691713_32691825_32693439_32693592_32694493_32694673_32695356_32695566_32696221_32696369_32698770_32698913_32699216_32699352_32699429_32699569_32700074_32700214_32700347_32700476_32701701_32701847_32704607_32704738_32707420_32707640_32708402_32708601_32709357_32709567_32710261_32710385_32711940_32712139_32713246_32713355_32713687_32713877_32715686_32715777_32715861_32716126_32716245_32716508_32718314_32718475_32719166_32719284_32720733_32720943_32722273_32722423_32722889_32723102_32723480_32723702_32725018_32725133_32725832_32725966_32726825_32726942_32728041_32728176_32729629_32729788_32729950_32730072_32730279_32730491_32730755_32730985_32731208_32731330_32731914_32732086_32732745_32732961_32733336_32733725_32734341_32734452_32735192_32735896_32738608_32738771_32738902_32739177_32739743_32739980_32740378_32740475_32741005_32741101_32741322_32741445_32741775_32741923_32742455_32742566_32743105_32743180_32743641_32743841_32744541_32744705_32745581_32745729_32746440_32746568_32747843_32747950_32748574_32748691_32749552_32750036_32750249_32750477_32750912_32751069_32751226_32751394_32752030_32752193_32754429_32754568_32756376_32756516_32757736_32757907_32758355_32758500_32759049_32759198_32760619_32760943_32761209_32761372_32762251_32762354_32763156_32763353_32765108_32765277_32765661_32765826_32767081_32767172_32767941_32768058_32768652_32768828_32770269_32770344_32770877_32770993_32771836_32771901_32773259_32773403_32773950
ENSMUSG00000058013.12_0	chr5	+	5008	10	FSM	ENSMUSG00000058013.12	ENSMUST00000074733.11	5028	10	13	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCGTTGTTCTGTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	93241308	93322810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93319197
ENSMUSG00000058013.12_2	chr5	+	3463	9	FSM	ENSMUSG00000058013.12	ENSMUST00000201700.4	3478	9	7	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATTGTTTAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	93241303	93317609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358
ENSMUSG00000058013.12_4	chr5	+	1779	10	FSM	ENSMUSG00000058013.12	ENSMUST00000202308.4	1792	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTCTGGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	93241315	93324289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93323898
ENSMUSG00000058013.12_6	chr5	+	2424	11	FSM	ENSMUSG00000058013.12	ENSMUST00000201421.4	2428	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGCCTTTGAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	93241388	93324306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_93241457_93287307_93287423_93296245_93296442_93302728_93302916_93304709_93304872_93309008_93309106_93309982_93310152_93313107_93313241_93315358_93315547_93321331_93321397_93323262
ENSMUSG00000058046.2_0	chr4	+	1783	15	FSM	ENSMUSG00000058046.2	ENSMUST00000062145.2	1783	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGACTCTTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	62443605	62466230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62443634_62444018_62444116_62450488_62450642_62450752_62450898_62454747_62454806_62457099_62457201_62458655_62458720_62460039_62460204_62460872_62461021_62461364_62461453_62461691_62461739_62461933_62461977_62464256_62464379_62465501_62465566_62465769
ENSMUSG00000058046.2_1	chr4	+	1752	14	ISM	ENSMUSG00000058046.2	ENSMUST00000062145.2	1783	15	416	0	416	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAAGACTCTTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	62444021	62466230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_62444116_62450488_62450642_62450752_62450898_62454747_62454806_62457099_62457201_62458655_62458720_62460039_62460204_62460872_62461021_62461364_62461453_62461691_62461739_62461933_62461977_62464256_62464379_62465501_62465566_62465769
ENSMUSG00000058056.17_0	chr8	-	4180	12	FSM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	6	7	6	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGATGACAGTTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	62044170	61964473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62044093
ENSMUSG00000058056.17_21	chr8	-	5487	19	FSM	ENSMUSG00000058056.17	ENST00000261509.10	5513	19	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACATCAATAAATAAATATT	NA	NA	NA	NA	NA	NA	NA	NA	62330922	61964494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61966559_61968021_61968069_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62137768_62138112_62140363_62140509_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946
ENSMUSG00000058056.17_3	chr8	-	4104	11	ISM	ENSMUSG00000058056.17	ENSMUST00000121200.9	4193	12	40895	8	40895	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGATGACAGTTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	62003281	61964474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604
ENSMUSG00000058056.17_4	chr8	-	5429	20	FSM	ENSMUSG00000058056.17	ENSMUST00000121493.9	5445	20	5	11	5	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACAGATGACAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	62213118	61964477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61988719_61988819_61991721_61991858_62002604_62003280_62137768_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62212844
ENSMUSG00000058056.17_7	chr8	-	6327	22	FSM	ENSMUSG00000058056.17	ENSMUST00000121785.9	6349	22	11	11	11	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACAGATGACAGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	62355692	61964477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61966559_61968236_61968371_61968902_61969069_61969568_61969777_61975917_61976051_61978101_61978197_61984945_61985096_61986387_61986610_61987891_61987943_61988719_61988819_61991721_61991858_62002604_62003280_62137768_62138112_62140363_62140484_62155203_62155228_62156135_62156278_62162026_62162102_62164408_62164515_62165845_62165913_62173549_62173729_62329946_62330950_62355574
ENSMUSG00000058070.15_0	chr12	+	3870	22	FSM	ENSMUSG00000058070.15	ENSMUST00000054955.14	3879	22	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACCTACGTTTCTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	108376805	108505830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108376955_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058070.15_5	chr12	+	4134	22	FSM	ENSMUSG00000058070.15	ENSMUST00000109860.8	4160	22	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGACTTTCTTATTGA	NA	NA	NA	NA	NA	NA	NA	NA	108389092	108505815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_108389521_108429785_108429969_108438111_108438245_108454547_108454680_108468648_108468678_108472737_108472868_108475344_108475495_108476435_108476506_108478079_108478191_108479233_108479330_108480636_108480772_108481374_108481475_108482718_108482874_108487574_108487701_108487906_108488039_108493955_108494024_108496562_108496652_108500912_108501011_108501123_108501212_108502485_108502582_108503592_108503724_108504361
ENSMUSG00000058076.13_0	chr1	-	3121	5	ISM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	4795	1	4783	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGACCATACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	170973377	170954734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324
ENSMUSG00000058076.13_1	chr1	-	3170	6	FSM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGACCATACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	170978172	170954734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126_170971229_170973324_170973382_170978127
ENSMUSG00000058076.13_2	chr1	-	3068	4	ISM	ENSMUSG00000058076.13	ENSMUST00000111336.10	3171	6	6944	1	6932	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAGTGACCATACTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	170971228	170954734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_170957475_170963561_170963726_170966262_170966325_170971126
ENSMUSG00000058084.6_0	chr10	-	3480	2	FSM	ENSMUSG00000058084.6	ENSMUST00000216530.2	3502	2	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTACAATTAGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	130002621	129996224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_129999203_130002119
ENSMUSG00000058093.14_0	chr13	-	4813	4	FSM	ENSMUSG00000058093.14	ENSMUST00000012873.16	4835	4	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTATCCTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	67757814	67737567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67742035_67743334_67743431_67744767_67744895_67757691
ENSMUSG00000058135.13_0	chr3	-	1273	8	FSM	ENSMUSG00000058135.13	ENSMUST00000004140.11	1289	8	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3674	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCCATGAGTTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	107925279	107919576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107920095_107922068_107922180_107922260_107922357_107923643_107923745_107923834_107923917_107924199_107924265_107924666_107924743_107925055
ENSMUSG00000058153.16_0	chr5	-	2098	13	FSM	ENSMUSG00000058153.16	ENST00000343706.8	2113	13	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCCTACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112623009	112572487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112572592_112573479_112573595_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ENSMUSG00000058153.16_4	chr5	-	2101	13	FSM	ENSMUSG00000058153.16	ENST00000360929.7	2116	13	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGTAAGTGGTCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	112623014	112572492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112572592_112573479_112573595_112576241_112576437_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ENSMUSG00000058153.16_6	chr5	-	2291	14	FSM	ENSMUSG00000058153.16	ENST00000529632.6	2302	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGGTCCTACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112623013	112572487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112572592_112573479_112573589_112576241_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ENSMUSG00000058153.16_7	chr5	-	2298	14	FSM	ENSMUSG00000058153.16	ENST00000629590.2	2308	14	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGTCCTACTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	112623015	112572488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112572592_112573479_112573595_112576241_112576437_112584148_112584341_112586267_112586463_112588679_112588877_112609012_112609152_112610720_112610916_112612438_112612606_112613811_112613978_112619462_112619649_112620596_112620790_112621283_112621418_112622894
ENSMUSG00000058183.15_0	chr4	+	2928	24	FSM	ENSMUSG00000058183.15	ENSMUST00000163732.8	2935	24	0	7	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAGACTTTGTTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	154954041	154979978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_154954182_154955918_154956234_154966103_154966173_154966726_154966787_154967629_154967792_154968080_154968162_154969402_154969499_154969960_154970080_154970607_154970674_154972083_154972219_154972293_154972384_154973963_154974101_154974384_154974479_154975295_154975425_154975937_154976037_154976400_154976485_154976872_154976977_154977280_154977340_154977688_154977809_154978287_154978422_154978531_154978598_154979053_154979150_154979417_154979495_154979582
ENSMUSG00000058192.17_0	chr9	+	12953	6	FSM	ENSMUSG00000058192.17	ENSMUST00000115557.10	12974	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATCATGAGAAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	20492630	20516694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20492975_20499130_20499220_20499804_20499932_20502108_20502181_20502634_20502718_20504456
ENSMUSG00000058230.13_0	chr7	-	9129	7	FSM	ENSMUSG00000058230.13	ENSMUST00000075845.11	9147	7	11	7	11	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCAAGCTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	16348907	16227650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16231936_16232508_16232615_16245117_16245250_16246332_16246411_16282987_16283133_16295382_16299255_16348396
ENSMUSG00000058239.14_0	chr7	-	2389	10	FSM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	4	26	4	-26	multi-exon	TRUE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30656224	30644698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806_30655854_30656120
ENSMUSG00000058239.14_1	chr7	-	2288	9	ISM	ENSMUSG00000058239.14	ENSMUST00000058860.14	2419	10	372	26	326	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAACTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30655856	30644698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_30646095_30646175_30646305_30646389_30646485_30654168_30654228_30654530_30654619_30654714_30654866_30655224_30655426_30655573_30655693_30655806
ENSMUSG00000058240.15_0	chr16	-	1942	13	FSM	ENSMUSG00000058240.15	ENSMUST00000073466.13	1965	13	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCATTCACTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	91525849	91486218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_27	chr16	-	1720	12	FSM	ENSMUSG00000058240.15	ENSMUST00000117644.8	1727	12	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAATGTTTTTAAATA	NA	NA	NA	NA	NA	NA	NA	NA	91525687	91486233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91486804_91487591_91487638_91489486_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_40	chr16	-	1135	10	FSM	ENSMUSG00000058240.15	ENSMUST00000114023.3	1154	10	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTCTCTTTTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91525575	91491230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_91491554_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058240.15_7	chr16	-	1940	13	NNC	ENSMUSG00000058240.15	novel	1965	13	NA	NA	16	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTCATTCACTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	91525847	91486218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_-_91486804_91487591_91487630_91489478_91489593_91491069_91491189_91492148_91492248_91496064_91496177_91497959_91498094_91504112_91504182_91505716_91505762_91509082_91509156_91511636_91511715_91514291_91514364_91525445
ENSMUSG00000058248.13_0	chr1	+	1806	7	FSM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGAGAGGATCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	191873320	192188422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191873395_191903640_191903765_191907152_191907260_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058248.13_1	chr1	+	1732	6	ISM	ENSMUSG00000058248.13	ENST00000640044.1	1818	7	30325	7	30325	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGAGAGGATCATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	191903640	192188422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_191903765_191907152_191907260_192095324_192095525_192100990_192101244_192117030_192117228_192187571
ENSMUSG00000058254.13_0	chrX	+	1720	8	FSM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGCTATGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	10351399	10462834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ENSMUSG00000058254.13_1	chrX	+	7067	6	FSM	ENSMUSG00000058254.13	ENSMUST00000115526.2	7067	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTGTGGTTTTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	10351396	10462844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_10351478_10445553_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374
ENSMUSG00000058254.13_2	chrX	+	1637	7	ISM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	94158	14	94158	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAAATGGCTATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	10445554	10462830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374_10456459_10461517_10461594_10461868
ENSMUSG00000058254.13_3	chrX	+	6977	5	ISM	ENSMUSG00000058254.13	ENSMUST00000076354.13	1733	8	94156	10	94156	-10	intron_retention	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGGCTATGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	10445552	10462834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_10445743_10448403_10448479_10450280_10450377_10451735_10451892_10456374
ENSMUSG00000058258.15_0	chr13	+	3008	5	FSM	ENSMUSG00000058258.15	ENSMUST00000169314.9	3027	5	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	885	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCTTTAACATAGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	8935547	8942479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_8936033_8936767_8936941_8937520_8937614_8937958_8938090_8940353
ENSMUSG00000058267.14_0	chr1	+	2987	3	FSM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTAGGGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	160022791	160029735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160022882_160024515_160024675_160026997
ENSMUSG00000058267.14_10	chr1	+	2899	2	ISM	ENSMUSG00000058267.14	ENSMUST00000135680.8	2999	3	1729	5	1641	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTACAGTAGGGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	160024513	160029735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_160024675_160026997
ENSMUSG00000058267.14_8	chr1	+	759	3	FSM	ENSMUSG00000058267.14	ENSMUST00000097193.3	787	3	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCTGTGAAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	160022893	160027375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_160023116_160024515_160024675_160026997
ENSMUSG00000058290.5_0	chr15	+	6649	31	FSM	ENSMUSG00000058290.5	ENSMUST00000064924.6	6658	31	1	8	1	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTCAGTTTGTGAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	102204701	102232784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102204851_102205194_102205285_102206618_102207675_102207853_102207959_102208237_102208350_102211046_102211184_102212386_102212581_102213360_102213601_102214099_102214245_102214332_102214472_102214669_102214810_102217632_102217768_102219034_102219155_102220849_102221022_102221370_102221500_102221617_102221775_102222421_102222532_102223622_102224612_102224953_102225327_102225484_102225647_102227846_102228061_102228137_102228329_102228847_102228976_102229078_102229202_102230759_102230916_102231010_102231182_102231302_102231408_102231589_102231706_102231884_102231969_102232077_102232243_102232442
ENSMUSG00000058291.15_0	chr5	-	4731	6	FSM	ENSMUSG00000058291.15	ENSMUST00000110905.9	4749	6	14	4	-7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATTCTCATTTTAATT	NA	NA	NA	NA	NA	NA	NA	NA	138618009	138601917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614828_138615316_138615430_138617870
ENSMUSG00000058291.15_3	chr5	-	3302	5	FSM	ENSMUSG00000058291.15	ENSMUST00000085852.11	3318	5	12	4	-6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGCATAAAAAAATTAATG	NA	NA	NA	NA	NA	NA	NA	NA	138618008	138603249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138615316_138615430_138617870
ENSMUSG00000058291.15_4	chr5	-	2244	6	FSM	ENSMUSG00000058291.15	ENSMUST00000063262.11	2254	6	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAAACCTTGATCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	138617996	138604385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_138606084_138610085_138610176_138610300_138610428_138614731_138614822_138615316_138615430_138617870
ENSMUSG00000058297.17_0	chr10	+	5204	10	NIC	ENSMUSG00000058297.17	novel	5238	11	NA	NA	15	-10	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACACCACCTGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	59942055	59971010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_+_59942479_59957299_59957346_59957505_59957621_59959631_59959747_59961531_59961647_59961975_59962093_59962655_59962875_59965502_59965566_59966905_59967044_59967157
ENSMUSG00000058298.11_0	chr10	-	4818	13	ISM	ENSMUSG00000058298.11	ENSMUST00000075540.8	4868	14	314	-1	-166	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATGACTAAACTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	53506221	53412423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819
ENSMUSG00000058298.11_1	chr10	-	4871	14	FSM	ENSMUSG00000058298.11	ENSMUST00000075540.8	4868	14	0	-3	0	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGACTAAACTCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	53506535	53412421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_53414864_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811_53502131_53505819_53506228_53506490
ENSMUSG00000058298.11_5	chr10	-	2742	12	FSM	ENSMUSG00000058298.11	ENST00000619706.5	2754	12	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTCTTCCCCAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	53502110	53413399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_53414186_53417033_53417180_53417632_53417716_53423498_53423703_53424592_53424796_53439378_53439554_53487447_53487568_53488922_53489049_53491947_53492149_53496229_53496312_53498851_53499169_53501811
ENSMUSG00000058301.9_0	chr8	-	4588	24	FSM	ENSMUSG00000058301.9	ENSMUST00000075666.8	4618	24	11	19	11	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAACATGAACAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	70805917	70784193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792631_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ENSMUSG00000058301.9_1	chr8	-	4484	24	FSM	ENSMUSG00000058301.9	ENSMUST00000215817.2	4518	24	23	11	23	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAACAAACAGTCCCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	70805838	70784185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70785130_70785269_70785393_70785622_70785841_70785920_70786083_70786542_70786625_70786722_70786898_70787267_70787411_70787882_70788040_70788303_70788422_70789666_70789881_70790138_70790283_70790855_70790971_70791046_70791212_70791535_70791655_70791729_70791890_70791973_70792083_70792392_70792492_70792664_70792750_70793199_70793362_70794109_70794291_70794659_70794828_70795984_70796075_70796875_70797016_70805427
ENSMUSG00000058317.13_0	chr14	+	1517	6	FSM	ENSMUSG00000058317.13	ENSMUST00000150727.8	1523	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATGCCCTTCTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	3575919	3896113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_3576112_3581246_3581431_3598151_3598203_3839264_3839398_3882697_3882846_3895304
ENSMUSG00000058317.13_1	chr14	+	1503	6	NNC	ENSMUSG00000058317.13	novel	1523	6	NA	NA	16	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATGCCCTTCTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	3575935	3896113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_3576112_3581246_3581431_3598151_3598203_3839262_3839398_3882697_3882846_3895304
ENSMUSG00000058318.16_0	chr2	+	6175	16	FSM	ENSMUSG00000058318.16	ENSMUST00000044036.15	6187	16	0	12	0	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAAGCCTCTCGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	91923461	92194999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_91923499_92051814_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ENSMUSG00000058318.16_2	chr2	+	3865	19	FSM	ENSMUSG00000058318.16	ENSMUST00000111293.9	3900	19	23	12	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGGAGAAAACGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	92014542	92192168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92014698_92044393_92044435_92045808_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157257_92157510_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ENSMUSG00000058318.16_5	chr2	+	6181	17	NIC	ENSMUSG00000058318.16	novel	2461	18	NA	NA	-6005	-7	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTCGGCCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92045901	92195004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_92045921_92051816_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174892_92174930_92178365_92178393_92179222_92179303_92179732_92179794_92181953_92181977_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ENSMUSG00000058318.16_6	chr2	+	6128	15	ISM	ENSMUSG00000058318.16	ENSMUST00000111291.9	2701	19	36002	-3758	-77	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTCGGCCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92051829	92195004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92158656_92158747_92160859_92161154_92174888_92174988_92178340_92178393_92179222_92179303_92179732_92179794_92182045_92182210_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ENSMUSG00000058318.16_7	chr2	+	6157	16	ISM	ENSMUSG00000058318.16	ENSMUST00000111297.10	6188	17	128340	7	-85	-7	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCTCTCGGCCTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	92051821	92195004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_92051961_92058793_92058827_92061003_92061070_92150573_92150805_92157260_92157510_92158656_92158747_92160859_92161154_92174892_92174930_92178365_92178393_92179222_92179303_92179732_92179794_92181953_92181977_92187208_92187365_92189038_92189115_92189450_92189555_92190513
ENSMUSG00000058325.7_0	chr7	+	2576	21	FSM	ENSMUSG00000058325.7	ENSMUST00000211593.2	2589	21	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGAATAAATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	134272415	134384902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475
ENSMUSG00000058325.7_1	chr7	+	6787	52	FSM	ENSMUSG00000058325.7	ENSMUST00000084488.5	6807	52	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAAAAAGGACTCCTGGT	NA	NA	NA	NA	NA	NA	NA	NA	134272431	134775364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_134272574_134326058_134326143_134331746_134331788_134335778_134335835_134339358_134339456_134342714_134342864_134345932_134346069_134346678_134346837_134348157_134348240_134348636_134348773_134355090_134355164_134358605_134358686_134362540_134362667_134365577_134365703_134366948_134367048_134367919_134367993_134373195_134373300_134374020_134374205_134379123_134379222_134384077_134384168_134384475_134384577_134390879_134391015_134406270_134406380_134449870_134449942_134453225_134453333_134475786_134475915_134477948_134478045_134592250_134592353_134600952_134601048_134678863_134678943_134683546_134683648_134693102_134693162_134700461_134700611_134710163_134710250_134710434_134710592_134715576_134715618_134717018_134717110_134720636_134720757_134734717_134734808_134735587_134735693_134739543_134739686_134739806_134739886_134742035_134742121_134745484_134745572_134747142_134747320_134748168_134748253_134753937_134754076_134760189_134760336_134765006_134765206_134768828_134768983_134770091_134770244_134774175
ENSMUSG00000058331.16_0	chr13	-	2291	4	FSM	ENSMUSG00000058331.16	ENSMUST00000144183.3	2312	4	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTATTGTCAGTATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	67903332	67895924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67897842_67899728_67899825_67900506_67900634_67903181
ENSMUSG00000058351.12_0	chr14	-	323	2	FSM	ENSMUSG00000058351.12	ENST00000476842.1	335	2	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAGGAACTGGTAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	30850736	30809468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30809645_30850589
ENSMUSG00000058351.12_1	chr14	-	770	4	FSM	ENSMUSG00000058351.12	ENSMUST00000064032.10	791	4	14	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTAAAGAGGCCATCATT	NA	NA	NA	NA	NA	NA	NA	NA	30850856	30810622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30810984_30845678_30845733_30846478_30846567_30850589
ENSMUSG00000058351.12_2	chr14	-	400	2	FSM	ENSMUSG00000058351.12	ENSMUST00000090205.5	426	2	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAACATAAAATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	30850841	30846642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_30846791_30850589
ENSMUSG00000058355.9_0	chr8	-	3773	18	FSM	ENSMUSG00000058355.9	ENSMUST00000080536.8	3793	18	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATATTAAACTTTTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	80438356	80410097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_80411907_80412573_80412686_80414069_80414193_80414292_80414436_80414523_80414635_80415753_80415813_80415936_80415997_80416865_80417088_80420052_80420175_80425975_80426066_80427214_80427312_80427541_80427612_80427743_80427882_80428402_80428521_80429632_80429731_80433862_80433949_80435051_80435182_80438171
ENSMUSG00000058385.9_0	chr13	+	595	1	FSM	ENSMUSG00000058385.9	ENSMUST00000079251.8	618	1	18	5	18	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTACACAGTAACTACCT	NA	NA	NA	NA	NA	NA	NA	NA	23755587	23756182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23755600_23756200
ENSMUSG00000058388.15_0	chr3	+	3311	19	FSM	ENSMUSG00000058388.15	ENSMUST00000063717.14	3327	19	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAGAATTTCAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103875582	103914797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUSG00000058388.15_3	chr3	+	3045	18	FSM	ENSMUSG00000058388.15	ENSMUST00000055425.15	3060	18	6	9	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAGAATTTCAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103875689	103914797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103893068_103893226_103894742_103894878_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUSG00000058388.15_5	chr3	+	2994	18	FSM	ENSMUSG00000058388.15	ENSMUST00000090685.11	3006	18	3	9	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGAGAATTTCAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	103875764	103914797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_103876104_103876370_103876447_103877069_103877127_103889201_103889272_103890261_103890421_103893068_103893226_103895930_103896091_103898353_103898528_103898635_103898723_103900996_103901219_103903917_103904047_103904748_103905022_103905987_103906120_103906586_103906674_103910762_103910919_103911702_103911799_103912814_103912941_103914303
ENSMUSG00000058392.14_0	chr17	+	4859	16	FSM	ENSMUSG00000058392.14	ENSMUST00000081339.13	4874	16	14	1	14	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTCTTTGATGTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	32255087	32281838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_32255579_32264902_32264986_32266647_32266706_32267526_32267613_32268399_32268462_32268922_32269053_32270119_32270185_32270656_32270824_32271712_32271802_32272830_32272929_32274078_32274099_32274884_32274972_32275529_32276231_32277497_32277639_32278247_32278312_32279321
ENSMUSG00000058402.15_0	chr7	+	2728	3	FSM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	1	15	1	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAATGAAAAAGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29559466	29576237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29559519_29572316_29572359_29573603
ENSMUSG00000058402.15_1	chr7	+	2671	2	ISM	ENSMUSG00000058402.15	ENSMUST00000057652.7	2744	3	12856	15	12856	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAATGAAAAAGACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	29572321	29576237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_29572359_29573603
ENSMUSG00000058407.13_0	chr1	-	3364	5	FSM	ENSMUSG00000058407.13	ENSMUST00000162031.8	3381	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATGCTCCCGTTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	38036385	38024275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036189
ENSMUSG00000058407.13_3	chr1	-	1685	5	FSM	ENSMUSG00000058407.13	ENSMUST00000195247.6	1699	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCATTCACATGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	38036965	38026479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_38026861_38029283_38029539_38033072_38033192_38034713_38034923_38036244
ENSMUSG00000058420.9_0	chr7	-	2933	7	FSM	ENSMUSG00000058420.9	ENST00000355377.7	2946	7	9	4	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCATTGGAGTTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	118047433	117979942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055_118033676_118036045_118036195_118041570_118041720_118047028
ENSMUSG00000058420.9_1	chr7	-	2950	8	FSM	ENSMUSG00000058420.9	ENSMUST00000203796.4	2957	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCATTGGAGTTATCTA	NA	NA	NA	NA	NA	NA	NA	NA	118047435	117979942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_117981276_118007247_118007404_118009146_118009268_118033055_118033676_118036045_118036195_118041570_118041720_118042341_118042365_118047036
ENSMUSG00000058440.15_0	chr6	+	3572	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115212.8	3584	12	10	2	-4	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGTGCCCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30047996	30153455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30048113_30088831_30088988_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUSG00000058440.15_10	chr6	+	2429	11	FSM	ENSMUSG00000058440.15	ENST00000223190.8	2436	11	0	7	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAGTCCTGTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	30048043	30152515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30048113_30089913_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUSG00000058440.15_22	chr6	+	2359	10	FSM	ENSMUSG00000058440.15	ENSMUST00000167972.9	1541	10	21	-839	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAGTCCTGTTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	30089914	30152515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512
ENSMUSG00000058440.15_23	chr6	+	2871	12	FSM	ENSMUSG00000058440.15	ENST00000353868.5	2888	12	14	3	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGTGCCCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30089926	30153455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30140214_30140271_30151512_30152384_30152855
ENSMUSG00000058440.15_24	chr6	+	2827	11	FSM	ENSMUSG00000058440.15	ENST00000393230.6	2832	11	2	3	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGTGCCCCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30089914	30153455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30152384_30152855
ENSMUSG00000058440.15_5	chr6	+	2924	12	FSM	ENSMUSG00000058440.15	ENST00000393232.6	2929	12	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAAAAGTGCCCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	30048012	30153454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30048113_30089916_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30151512_30152384_30152855
ENSMUSG00000058440.15_8	chr6	+	1867	12	FSM	ENSMUSG00000058440.15	ENSMUST00000115206.8	1879	12	7	5	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATATGTATGGTTTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	30048036	30144854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_30048113_30088831_30088988_30089910_30090146_30095338_30095454_30098447_30098575_30102167_30102309_30115011_30115171_30116094_30116293_30117054_30117157_30118947_30119106_30126233_30126359_30144579
ENSMUSG00000058441.8_0	chr15	+	2878	5	FSM	ENSMUSG00000058441.8	ENST00000159647.9	2898	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATAACTCCCTGTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	88944289	88955100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88944503_88951760_88953225_88953736_88953939_88954023_88954829_88954906
ENSMUSG00000058441.8_1	chr15	+	2964	4	FSM	ENSMUSG00000058441.8	ENST00000395842.3	2983	4	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAACTCCCTGTGCCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	88944291	88955103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_88944503_88951760_88953225_88953736_88954829_88954906
ENSMUSG00000058443.6_0	chr9	-	749	1	FSM	ENSMUSG00000058443.6	ENSMUST00000076364.6	768	1	-10	29	-10	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	6777	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50256278	50255529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50255500_50256300
ENSMUSG00000058444.9_0	chr9	-	2303	22	FSM	ENSMUSG00000058444.9	ENSMUST00000034920.11	2310	22	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCGTTTGTCTCAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	63285178	63071050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUSG00000058444.9_1	chr9	-	1627	21	FSM	ENSMUSG00000058444.9	ENST00000395476.6	1638	21	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	63284533	63071051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201047_63210402_63210443_63229484_63229550_63237189_63237239_63245366_63245435_63246362_63246404_63250668_63250739_63265274_63265343_63279018_63279068_63284404
ENSMUSG00000058444.9_3	chr9	-	1355	14	FSM	ENSMUSG00000058444.9	ENST00000340972.8	1365	14	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGCGTTTGTCTCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	63203417	63071051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_63071473_63101483_63101530_63104592_63104655_63124274_63124308_63124620_63124648_63142570_63142601_63164258_63164331_63169425_63169477_63170395_63170470_63188300_63188350_63193680_63193743_63200805_63200888_63200977_63201079_63203172
ENSMUSG00000058446.15_0	chr6	+	5876	5	FSM	ENSMUSG00000058446.15	ENSMUST00000079869.13	5886	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAAGCTCTCCTGTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	54793905	54870480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_54794458_54840884_54840981_54855333_54855440_54861749_54861832_54865440
ENSMUSG00000058454.16_0	chr7	+	2803	9	FSM	ENSMUSG00000058454.16	ENSMUST00000073878.12	2815	9	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTTATGTTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	143376910	143402141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_143377278_143383875_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ENSMUSG00000058454.16_7	chr7	+	2550	9	FSM	ENSMUSG00000058454.16	ENSMUST00000124340.8	2556	9	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAGTTATGTTGTACTG	NA	NA	NA	NA	NA	NA	NA	NA	143383362	143402141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_143383477_143383875_143384003_143390374_143390467_143391498_143391722_143394169_143394261_143394894_143395109_143396850_143397056_143399177_143399310_143400789
ENSMUSG00000058486.12_0	chr6	-	2666	15	FSM	ENSMUSG00000058486.12	ENSMUST00000081214.12	2682	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCACTTGGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34887802	34857367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869470_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_12	chr6	-	2237	15	FSM	ENSMUSG00000058486.12	ENST00000354475.5	2251	15	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGGGCCCGGCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	34887751	34857739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295_34886476_34887631
ENSMUSG00000058486.12_9	chr6	-	2110	14	FSM	ENSMUSG00000058486.12	ENST00000683848.1	2124	14	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCGGGCCCGGCTGACAC	NA	NA	NA	NA	NA	NA	NA	NA	34886468	34857739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_34857904_34861118_34861317_34863000_34863114_34863742_34863852_34865888_34866058_34866171_34866267_34868321_34868473_34869275_34869464_34873115_34873275_34881451_34881618_34882419_34882554_34883575_34883659_34885048_34885257_34886295
ENSMUSG00000058498.13_0	chr4	-	2449	17	FSM	ENSMUSG00000058498.13	ENSMUST00000076183.12	2466	17	9	8	9	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAAAAGAAGAGTACAG	NA	NA	NA	NA	NA	NA	NA	NA	152403056	152391483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_152392074_152393294_152393361_152395840_152395959_152396228_152396281_152396527_152396714_152396846_152397034_152397643_152397742_152397820_152397890_152398335_152398405_152398492_152398566_152399498_152399546_152399848_152399975_152400059_152400136_152400207_152400290_152400375_152400521_152402117_152402251_152402724
ENSMUSG00000058503.12_0	chr5	+	1932	10	FSM	ENSMUSG00000058503.12	ENSMUST00000197082.5	1943	10	7	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTGTTGTCTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	3593839	3620234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3614240_3614328_3615702_3615751_3618986
ENSMUSG00000058503.12_17	chr5	+	615	9	FSM	ENSMUSG00000058503.12	ENST00000464802.1	639	9	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGAAGGCCGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	3604647	3619031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3618986
ENSMUSG00000058503.12_28	chr5	+	524	8	ISM	ENSMUSG00000058503.12	ENST00000464802.1	639	9	3105	17	3105	-17	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGAAAAAGAAGGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	3607742	3619028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3618986
ENSMUSG00000058503.12_8	chr5	+	1477	11	FSM	ENSMUSG00000058503.12	ENSMUST00000115527.8	1491	11	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGCATGAGAAAGCCCCCAA	NA	NA	NA	NA	NA	NA	NA	NA	3593851	3619740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3593948_3604638_3604737_3607743_3607823_3608472_3608548_3608660_3608694_3609096_3609160_3609605_3609699_3611038_3611090_3614240_3614328_3615702_3615751_3618986
ENSMUSG00000058546.9_0	chr11	-	480	4	ISM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	604	8	604	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAAATAATGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	78073806	78071768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628
ENSMUSG00000058546.9_1	chr11	-	552	5	FSM	ENSMUSG00000058546.9	ENSMUST00000102483.5	560	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAAATAATGCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	78074410	78071768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_78071824_78071979_78072050_78072242_78072420_78073628_78073813_78074344
ENSMUSG00000058550.16_0	chr16	+	1463	7	FSM	ENSMUSG00000058550.16	ENSMUST00000096045.9	1479	7	4	12	4	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAAATCTGGCTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	48104101	48114588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_48104205_48108240_48108359_48109401_48109569_48109690_48109742_48111376_48111678_48113273_48113470_48114061
ENSMUSG00000058558.13_0	chr5	+	2014	8	FSM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	25	6	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTACCTGTGTGGCATTC	NA	NA	NA	NA	NA	NA	NA	NA	108048392	108056865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108048513_108049735_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058558.13_7	chr5	+	932	7	ISM	ENSMUSG00000058558.13	ENSMUST00000082223.13	2045	8	1373	963	1373	-963	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCAGCTTTTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	108049740	108055908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_108049806_108049887_108050004_108051134_108051270_108051531_108051735_108052582_108052761_108055054_108055144_108055762
ENSMUSG00000058569.9_0	chr13	+	1378	5	FSM	ENSMUSG00000058569.9	ENSMUST00000109905.5	1420	5	11	31	11	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	1279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAGAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55740992	55745479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55741171_55741313_55741415_55742517_55742644_55743280_55743428_55744653
ENSMUSG00000058571.12_0	chr14	+	3490	10	NNC	ENSMUSG00000058571.12	novel	3488	10	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATGTTATTCATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	117162847	118213956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_117163098_117163241_117163509_117424069_117424233_117673062_117673456_117861796_117861963_118107762_118107896_118125933_118126078_118188549_118188687_118202110_118202287_118212295
ENSMUSG00000058571.12_54	chr14	+	2416	10	NNC	ENSMUSG00000058571.12	novel	2423	10	NA	NA	14	-1	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGGGTTTTGGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	117162956	118212817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_117163509_117424069_117424233_117673062_117673456_117861796_117861963_118107762_118107896_118125933_118126078_118129753_118129784_118188549_118188687_118202110_118202287_118212295
ENSMUSG00000058586.13_0	chr15	+	1355	12	FSM	ENSMUSG00000058586.13	ENSMUST00000078218.11	1371	12	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82984416	83000871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82984549_82985844_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUSG00000058586.13_5	chr15	+	2564	11	FSM	ENSMUSG00000058586.13	ENSMUST00000166427.8	2577	11	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAGTTCCAAGTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	82984503	83000871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82985995_82986072_82986187_82986499_82986542_82986825_82986846_82987134_82987210_82988509_82988623_82989811_82989892_82996410_82996446_82998557_82998641_82999767_82999865_83000457
ENSMUSG00000058587.10_0	chr9	-	3646	10	FSM	ENSMUSG00000058587.10	ENSMUST00000072232.9	3667	10	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATATTAGCTGTATG	NA	NA	NA	NA	NA	NA	NA	NA	75466926	75404996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_75407433_75412121_75412267_75414662_75414807_75416595_75416704_75418407_75418539_75422448_75422539_75423754_75423878_75436650_75436808_75439707_75439875_75466781
ENSMUSG00000058589.15_0	chr10	+	1624	9	FSM	ENSMUSG00000058589.15	ENST00000547010.5	1639	9	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTAAGTTGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	89999027	90516775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_89999167_90096514_90096681_90143430_90143568_90194896_90195078_90346457_90347045_90348676_90348738_90412950_90413058_90480319_90480419_90516628
ENSMUSG00000058594.16_0	chr2	-	3554	21	FSM	ENSMUSG00000058594.16	ENSMUST00000071564.14	3567	21	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTAGCTTCAGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	11782385	11747390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_11747845_11748436_11748569_11751870_11751978_11753174_11753301_11753747_11753946_11754341_11754418_11756261_11756384_11756477_11756578_11760451_11760589_11761227_11761315_11761412_11761501_11762250_11762474_11763090_11763260_11764739_11764835_11765291_11765385_11767641_11767833_11768680_11768817_11768913_11769045_11771932_11772523_11774586_11774743_11782242
ENSMUSG00000058600.14_0	chr15	-	870	5	FSM	ENSMUSG00000058600.14	ENSMUST00000079735.12	886	5	11	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34443775	34440655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170_34443224_34443330
ENSMUSG00000058600.14_2	chr15	-	486	3	FSM	ENSMUSG00000058600.14	ENSMUST00000142643.2	505	3	14	5	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34443040	34440655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34440751_34441377_34441509_34442780
ENSMUSG00000058600.14_6	chr15	-	558	4	FSM	ENSMUSG00000058600.14	ENSMUST00000009039.6	570	4	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATGGTGTCTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	34443356	34440655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_34440751_34441377_34441509_34442780_34442927_34443170
ENSMUSG00000058624.14_0	chr19	-	1318	13	FSM	ENSMUSG00000058624.14	ENST00000376986.5	1337	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTAAGGACCTTGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	21449926	21372558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_21372623_21373396_21373425_21374870_21375002_21377922_21378070_21387235_21387304_21389861_21389960_21392177_21392286_21396737_21396766_21400361_21400468_21402894_21402983_21405842_21406015_21411584_21411670_21449731
ENSMUSG00000058638.15_0	chr7	+	3574	8	FSM	ENSMUSG00000058638.15	ENSMUST00000004614.15	3591	8	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGCTGGACTATAGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	12568703	12584503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12569092_12569373_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058638.15_2	chr7	+	2488	7	FSM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTAGCCTTTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12569411	12583843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12569455_12570219_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058638.15_3	chr7	+	2441	6	ISM	ENSMUSG00000058638.15	ENSMUST00000168247.2	2499	7	814	9	814	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGTAGCCTTTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	12570223	12583843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_12570347_12571015_12571112_12578358_12578833_12580722_12580824_12581898_12582026_12582323
ENSMUSG00000058655.10_0	chr15	+	3836	15	FSM	ENSMUSG00000058655.10	ENSMUST00000169681.3	3854	15	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATGGTTAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	101982217	102005600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101982399_101990410_101990549_101992595_101992805_101993113_101993231_101994437_101994493_101994939_101995075_101997050_101997189_101997291_101997466_101998300_101998530_101999831_101999930_102001420_102001635_102002092_102002149_102003106_102003213_102003411_102003485_102003687
ENSMUSG00000058656.14_0	chr15	-	8996	5	FSM	ENSMUSG00000058656.14	ENSMUST00000078673.14	9019	5	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTATTACCGTGTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53765909	53317211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_53325613_53521745_53521887_53583010_53583141_53723499_53723679_53765764
ENSMUSG00000058665.9_0	chr1	+	2606	2	FSM	ENSMUSG00000058665.9	ENSMUST00000079721.9	2624	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTTGCTGACTGCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	120530158	120535715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_120531651_120534601
ENSMUSG00000058672.8_0	chr13	-	1590	4	FSM	ENSMUSG00000058672.8	ENSMUST00000056427.10	1610	4	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATCTATGGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34261980	34258266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34259512_34260160_34260272_34260531_34260641_34261855
ENSMUSG00000058690.15_0	chr14	-	7491	11	FSM	ENSMUSG00000058690.15	ENSMUST00000090024.11	7509	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAAGTGTGCTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36690725	36596901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ENSMUSG00000058690.15_1	chr14	-	7316	10	FSM	ENSMUSG00000058690.15	ENSMUST00000067700.13	7334	10	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAAGTGTGCTTGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	36690635	36596901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36601720_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36648795_36648887_36660540_36660738_36661768_36663222_36690498
ENSMUSG00000058690.15_4	chr14	-	1473	8	FSM	ENSMUSG00000058690.15	ENSMUST00000182797.8	1482	8	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCAAAAACAAATAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	36641283	36601101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36601720_36612250_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36641181
ENSMUSG00000058690.15_5	chr14	-	1393	8	FSM	ENSMUSG00000058690.15	ENSMUST00000182042.2	1420	8	26	1	26	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCAAGTCCTTGCAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	36641466	36601316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36601720_36612298_36612384_36618211_36618302_36620120_36620208_36622718_36622803_36630973_36631170_36640390_36640554_36641181
ENSMUSG00000058700.3_0	chr6	-	446	1	FSM	ENSMUSG00000058700.3	ENSMUST00000080061.3	480	1	28	6	28	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCCTAATGTACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	90822414	90821968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_90822000_90822400
ENSMUSG00000058704.10_0	chr17	-	3137	9	FSM	ENSMUSG00000058704.10	ENSMUST00000233514.3	3163	9	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGCACATTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	74601840	74506038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686
ENSMUSG00000058704.10_16	chr17	-	1259	8	FSM	ENSMUSG00000058704.10	ENST00000426310.6	1282	8	14	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTACACAGACAAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	74601852	74507859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74565418_74565501_74601686
ENSMUSG00000058704.10_7	chr17	-	1452	10	FSM	ENSMUSG00000058704.10	ENST00000404530.6	1466	10	1	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACAACTCAAAATAGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	74602469	74507709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74508321_74509255_74509361_74524021_74524099_74532426_74532570_74548899_74549012_74551969_74552083_74562222_74562292_74565418_74565501_74601686_74601765_74602407
ENSMUSG00000058706.6_0	chr6	+	4594	4	FSM	ENSMUSG00000058706.6	ENSMUST00000077783.5	4605	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATTTTTTTGCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72324321	72330125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72324499_72324575_72324695_72325511_72325664_72325979
ENSMUSG00000058709.12_0	chr7	-	2089	6	FSM	ENSMUSG00000058709.12	ENSMUST00000080058.11	2107	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	726	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCACACACTTGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	26866216	26858089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26858637_26858948_26859017_26859211_26859349_26859712_26859833_26864044_26865154_26866108
ENSMUSG00000058729.14_0	chr1	+	3140	15	FSM	ENSMUSG00000058729.14	ENSMUST00000192561.6	3160	15	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATTTAATGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	180468723	180518241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180479426_180479532_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827_180515926_180516832
ENSMUSG00000058729.14_2	chr1	+	1519	13	FSM	ENSMUSG00000058729.14	ENST00000481685.1	1541	13	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGGTATGTGATGACGTGT	NA	NA	NA	NA	NA	NA	NA	NA	180468837	180515932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180468963_180475865_180475899_180478306_180478402_180486627_180486762_180489041_180489168_180493347_180493506_180494889_180495024_180496328_180496449_180496696_180496799_180501628_180501710_180508664_180508791_180515524_180515705_180515827
ENSMUSG00000058740.15_0	chr2	+	3623	30	FSM	ENSMUSG00000058740.15	ENST00000487664.5	3635	30	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCATGCTGGGGCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25753966	25806128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25754075_25778080_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666_25802730_25805790_25805879_25806008
ENSMUSG00000058740.15_23	chr2	+	3710	31	FSM	ENSMUSG00000058740.15	ENST00000631073.2	3724	31	10	4	2	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	3895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCATGCTGGGGCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25767894	25806128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25768048_25772207_25772250_25778080_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25802666_25802730_25805790_25805879_25806008
ENSMUSG00000058740.15_55	chr2	+	3447	28	FSM	ENSMUSG00000058740.15	ENST00000675090.1	3456	28	5	4	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCATGCTGGGGCGAAC	NA	NA	NA	NA	NA	NA	NA	NA	25778085	25806128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25778161_25778770_25778871_25780860_25780918_25781202_25781252_25782069_25782130_25782345_25782421_25782485_25782570_25783140_25783236_25784293_25784475_25788282_25788448_25788710_25788848_25790234_25790299_25790383_25790493_25790900_25791010_25791220_25791371_25791763_25792003_25793370_25793606_25795284_25795391_25796674_25796848_25797286_25797359_25797527_25797663_25798056_25798169_25799216_25799319_25799605_25799690_25799825_25799949_25801020_25801369_25805790_25805879_25806008
ENSMUSG00000058748.10_0	chr8	+	2353	4	FSM	ENSMUSG00000058748.10	ENSMUST00000202692.5	2364	4	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTACAAATATATAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	4663173	4680227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4663279_4675839_4675967_4676163_4676225_4678167
ENSMUSG00000058756.14_0	chr11	+	2437	10	FSM	ENSMUSG00000058756.14	ENSMUST00000064187.12	2452	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAACTGCGTGTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	98632644	98659825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103_98655232_98658982
ENSMUSG00000058756.14_2	chr11	+	2230	9	FSM	ENSMUSG00000058756.14	ENSMUST00000103139.11	2246	9	2	14	2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAACTAGACAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98632700	98655923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98632833_98644115_98644465_98646933_98647002_98647748_98647850_98651701_98651850_98652546_98652753_98653746_98653894_98654354_98654614_98655103
ENSMUSG00000058773.3_0	chr13	-	729	1	FSM	ENSMUSG00000058773.3	ENSMUST00000080511.3	743	1	2	12	2	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTAGGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21964793	21964064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21964100_21964800
ENSMUSG00000058793.15_0	chr2	+	1220	4	FSM	ENSMUSG00000058793.15	ENSMUST00000110158.8	1247	4	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAGCAAAAATGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	132105080	132138099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450
ENSMUSG00000058793.15_1	chr2	+	8378	13	FSM	ENSMUSG00000058793.15	ENSMUST00000103181.11	8396	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTAGATTGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132105077	132153962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132105418_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUSG00000058793.15_4	chr2	+	8065	13	FSM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTAGATTGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132127858	132153962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132127886_132135164_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUSG00000058793.15_5	chr2	+	8031	12	ISM	ENSMUSG00000058793.15	ENSMUST00000089461.11	8073	13	7313	8	7313	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCTAGATTGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	132135171	132153962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_132135302_132136303_132136401_132137450_132137549_132139144_132139285_132139553_132139613_132140388_132140472_132142473_132142562_132143151_132143221_132143999_132144153_132146278_132146399_132146772_132146877_132147072
ENSMUSG00000058794.13_1	chr15	-	1378	3	FSM	ENSMUSG00000058794.13	ENST00000435572.7	1396	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCACTTCTTAATCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	103163733	103156813	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_103157876_103159355_103159526_103163587
ENSMUSG00000058799.17_1	chr10	+	1552	13	FSM	ENSMUSG00000058799.17	ENST00000542344.5	1564	13	5	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTTGAACATACTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	111309042	111332217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111309213_111317140_111317178_111322504_111322608_111325888_111326031_111326237_111326319_111326872_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_103	chr10	+	1350	13	FSM	ENSMUSG00000058799.17	ENSMUST00000219143.2	1365	13	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAGCAACATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	111309144	111330858	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655
ENSMUSG00000058799.17_127	chr10	+	3917	14	FSM	ENSMUSG00000058799.17	ENSMUST00000218828.2	3934	14	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATACACTGGTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	111316486	111334003	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900
ENSMUSG00000058799.17_165	chr10	+	1444	12	FSM	ENSMUSG00000058799.17	ENST00000535020.6	1444	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	111317142	111331254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111330911
ENSMUSG00000058799.17_183	chr10	+	1108	11	FSM	ENSMUSG00000058799.17	ENST00000432820.1	1124	11	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCAAAGGTGAGCAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	111321357	111331228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329315_111330031_111330155_111330655_111330686_111331185
ENSMUSG00000058799.17_208	chr10	+	1400	11	ISM	ENSMUSG00000058799.17	ENST00000535020.6	1444	12	4226	0	19	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	111321368	111331254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655_111330686_111330911
ENSMUSG00000058799.17_24	chr10	+	1475	16	FSM	ENSMUSG00000058799.17	ENSMUST00000065917.16	1486	16	10	1	6	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGATGCTGTCTCGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	111309093	111332744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329304_111329410_111329431_111330031_111330155_111330655_111330686_111331185_111331237_111331900_111331967_111332614
ENSMUSG00000058799.17_31	chr10	+	1788	12	FSM	ENSMUSG00000058799.17	ENST00000549596.5	1797	12	9	0	-6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCCTCTGCCTCACACT	NA	NA	NA	NA	NA	NA	NA	NA	111309096	111331254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326319_111326869_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655
ENSMUSG00000058799.17_83	chr10	+	1515	12	FSM	ENSMUSG00000058799.17	ENST00000552342.5	1523	12	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATCTTTTCAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	111309118	111330969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111309213_111317140_111317178_111321359_111321446_111322504_111322608_111325888_111326031_111326237_111326323_111326839_111326999_111327947_111328020_111328702_111328843_111329157_111329318_111330031_111330155_111330655
ENSMUSG00000058806.16_0	chr10	-	2047	29	FSM	ENSMUSG00000058806.16	ENST00000673628.2	2066	29	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCACACACACACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61814404	61674142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61728734_61728749_61741032_61741060_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_25	chr10	-	2177	28	FSM	ENSMUSG00000058806.16	ENST00000673842.1	2189	28	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATCTGTTTCTAATACA	NA	NA	NA	NA	NA	NA	NA	NA	61814652	61674297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61674488_61675856_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709717_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61728734_61728749_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_45	chr10	-	2045	28	FSM	ENSMUSG00000058806.16	ENST00000674121.1	2066	28	5	16	5	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAGAAAGAAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	61814656	61674378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61689135_61689172_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61728734_61728749_61797067_61797138_61814127
ENSMUSG00000058806.16_5	chr10	-	2037	28	NIC	ENSMUSG00000058806.16	novel	2066	29	NA	NA	7	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTCACACACACACACAAA	NA	NA	NA	NA	NA	NA	NA	NA	61814408	61674142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_61674488_61675856_61675896_61678382_61678461_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61741032_61741060_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_51	chr10	-	1804	30	FSM	ENSMUSG00000058806.16	ENST00000522165.5	1818	30	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTAAGATTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	61814407	61675862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61728734_61728749_61744460_61744497_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058806.16_52	chr10	-	1785	29	NIC	ENSMUSG00000058806.16	novel	1818	30	NA	NA	13	-6	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGGTAAGATTCCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	61814402	61675862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_61675896_61679346_61679434_61684954_61684991_61685935_61685990_61686890_61686945_61692116_61692198_61692560_61692588_61693366_61693409_61696218_61696264_61698406_61698551_61698822_61698868_61699719_61699783_61702169_61702194_61703230_61703300_61703609_61703655_61705302_61705357_61705939_61706027_61707068_61707114_61709772_61709800_61710516_61710550_61712046_61712092_61720454_61720491_61721466_61721494_61723027_61723136_61725857_61725924_61744460_61744497_61747485_61747513_61797067_61797138_61814127
ENSMUSG00000058833.12_0	chr8	-	664	5	FSM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70959396	70956945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUSG00000058833.12_1	chr8	-	580	4	ISM	ENSMUSG00000058833.12	ENSMUST00000075175.12	671	5	172	1	157	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCCCATCAGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	70959230	70956945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_70957160_70957633_70957711_70958405_70958611_70959146
ENSMUSG00000058833.12_4	chr8	-	653	5	FSM	ENSMUSG00000058833.12	ENSMUST00000136913.2	671	5	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTTCCCATCAGCTC	NA	NA	NA	NA	NA	NA	NA	NA	70959369	70956948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70957179_70957633_70957711_70958405_70958611_70959146_70959230_70959311
ENSMUSG00000058835.15_0	chr2	-	3341	10	FSM	ENSMUSG00000058835.15	ENSMUST00000126112.8	3360	10	9	10	-1	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTGAAATTATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	22930198	22830094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_1	chr2	-	3380	10	FSM	ENSMUSG00000058835.15	ENSMUST00000140164.8	3403	10	13	10	2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTGAAATTATTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	22930240	22830094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_2	chr2	-	2946	7	FSM	ENSMUSG00000058835.15	ENST00000490841.6	2958	7	7	5	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATAAGGTTGAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	22930250	22830100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22847029_22847131_22850718_22850860_22852412_22852514_22884534_22884703_22929960
ENSMUSG00000058835.15_3	chr2	-	3283	9	FSM	ENSMUSG00000058835.15	ENSMUST00000149719.8	3303	9	17	3	-5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAATAAGGTTGAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	22930236	22830100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_5	chr2	-	3032	11	FSM	ENSMUSG00000058835.15	ENSMUST00000123948.8	3067	11	26	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAAATTCTCTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	22930108	22830328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_6	chr2	-	2997	11	FSM	ENSMUSG00000058835.15	ENSMUST00000091394.13	3023	11	16	10	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAAATTTGGATATT	NA	NA	NA	NA	NA	NA	NA	NA	22930133	22830385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843621_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_7	chr2	-	3005	10	FSM	ENSMUSG00000058835.15	ENSMUST00000078977.14	3027	10	17	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAAAAATTTGGATATT	NA	NA	NA	NA	NA	NA	NA	NA	22930225	22830385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22853225_22853241_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058835.15_8	chr2	-	2219	11	FSM	ENSMUSG00000058835.15	ENSMUST00000178908.2	2239	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAACCAAAGGATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	22930220	22831253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_22832060_22836587_22836774_22840195_22840283_22843446_22843624_22847029_22847131_22850718_22850860_22852412_22852514_22861038_22861054_22861094_22861272_22884534_22884703_22929960
ENSMUSG00000058838.10_0	chr9	+	504	1	FSM	ENSMUSG00000058838.10	ENSMUST00000078766.10	467	1	-18	-19	-18	19	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAGAAGGAACTCGTAA	NA	NA	NA	NA	NA	NA	NA	NA	83291694	83292198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_83291700_83292200
ENSMUSG00000058881.14_0	chr18	+	7722	6	FSM	ENSMUSG00000058881.14	ENSMUST00000171238.8	7725	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGTTTTGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82929003	83023436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_82929118_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ENSMUSG00000058881.14_1	chr18	+	7690	6	FSM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCTGTTTTGACCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	82932766	83023436	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_82932849_82973648_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ENSMUSG00000058881.14_3	chr18	+	7601	5	ISM	ENSMUSG00000058881.14	ENSMUST00000071233.7	7703	6	40891	11	40891	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTTGACAGCCTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82973647	83023428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_82975575_83004868_83006324_83011194_83011315_83012594_83012663_83019397
ENSMUSG00000058883.17_0	chr13	-	2410	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	0	6	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	67229576	67217468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67229513
ENSMUSG00000058883.17_1	chr13	-	2346	3	ISM	ENSMUSG00000058883.17	ENSMUST00000109742.11	2416	4	6554	6	6554	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	67223022	67217468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67219593_67222149_67222246_67222896
ENSMUSG00000058886.10_0	chr7	-	2122	12	FSM	ENSMUSG00000058886.10	ENSMUST00000080553.9	2135	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGAATGTTGTCAAGC	NA	NA	NA	NA	NA	NA	NA	NA	140907577	140877097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140877530_140881512_140881603_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ENSMUSG00000058886.10_6	chr7	-	2860	11	FSM	ENSMUSG00000058886.10	ENSMUST00000211537.2	2882	11	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCTAGTCCATAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	140907469	140880231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140881600_140890674_140890923_140893132_140893262_140894246_140894376_140894774_140894902_140901022_140901089_140901838_140901979_140902374_140902522_140902802_140902933_140903994_140904093_140907191
ENSMUSG00000058900.6_0	chr13	+	2585	4	FSM	ENSMUSG00000058900.6	ENSMUST00000021997.8	2591	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGAACATTGTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	67321245	67332102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67321318_67324511_67324639_67325128_67325225_67329812
ENSMUSG00000058900.6_1	chr13	+	2515	3	ISM	ENSMUSG00000058900.6	ENSMUST00000021997.8	2591	4	3264	6	3264	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAGAACATTGTATCTC	NA	NA	NA	NA	NA	NA	NA	NA	67324509	67332102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_67324639_67325128_67325225_67329812
ENSMUSG00000058914.13_0	chr15	+	2319	6	FSM	ENSMUSG00000058914.13	ENSMUST00000022853.15	2338	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGCTTCTTACTTATT	NA	NA	NA	NA	NA	NA	NA	NA	10952427	10980227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10952624_10958042_10958155_10960713_10960869_10972066_10972197_10975676_10975777_10978601
ENSMUSG00000058914.13_3	chr15	+	2066	6	FSM	ENSMUSG00000058914.13	ENSMUST00000110523.2	2088	6	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCCATAACAACATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	10952451	10979779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10952843_10958042_10958155_10960713_10960869_10972066_10972197_10975676_10975777_10978601
ENSMUSG00000058922.8_0	chr9	-	1364	1	FSM	ENSMUSG00000058922.8	ENSMUST00000168019.2	960	1	-54	-350	-54	350	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	123519311	123517947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_123517900_123519300
ENSMUSG00000058927.7_0	chr19	+	924	1	FSM	ENSMUSG00000058927.7	ENSMUST00000073080.7	946	1	15	7	15	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTCTTTATAGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	24853064	24853988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_24853100_24854000
ENSMUSG00000058952.13_0	chr3	+	1258	7	FSM	ENSMUSG00000058952.13	ENST00000394635.8	1271	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATACAAGGTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652028	129668971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129652118_129652361_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_1	chr3	+	1105	7	FSM	ENSMUSG00000058952.13	ENST00000512148.5	1122	7	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGTTCTCCTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	129652032	129668853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_129652118_129652361_129652473_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058952.13_10	chr3	+	1171	6	ISM	ENSMUSG00000058952.13	ENST00000394635.8	1271	7	337	7	337	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATACAAGGTGGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	129652359	129668971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_129652504_129661821_129661960_129662129_129662234_129666489_129666768_129667934_129668040_129668569
ENSMUSG00000058975.8_0	chr7	+	3482	5	FSM	ENSMUSG00000058975.8	ENST00000639325.2	3491	5	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTTCTGATGCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	46045933	46150733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46047672_46076769_46077704_46084581_46084833_46105522_46105783_46150434
ENSMUSG00000058979.8_0	chr6	-	1923	8	FSM	ENSMUSG00000058979.8	ENSMUST00000075303.7	1928	8	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGTGTCTTGTGAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	120508276	120486455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_120487424_120487591_120487781_120491358_120491534_120494010_120494042_120495404_120495499_120498154_120498268_120500366_120500571_120508127
ENSMUSG00000058997.9_1	chr14	+	7045	45	FSM	ENSMUSG00000058997.9	ENSMUST00000040990.7	7054	45	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCCAATGAGTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79086491	79439741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293_79302446_79318552_79318662_79320212_79320352_79324059_79324260_79329730_79329842_79331165_79331231_79331637_79331764_79333111_79333222_79333824_79333980_79335673_79335870_79339675_79339758_79340931_79341137_79394511_79394621_79397404_79397562_79401543_79401653_79418180_79418307_79420412_79420572_79434851_79434951_79435661_79435901_79438537
ENSMUSG00000058997.9_7	chr14	+	3406	26	FSM	ENSMUSG00000058997.9	ENSMUST00000227255.2	3406	26	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTCTCCGTCCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79086693	79302708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79086884_79106218_79106297_79145562_79145694_79149608_79149720_79162701_79162870_79171105_79171271_79172033_79172084_79172622_79172732_79174544_79174650_79184580_79184713_79186723_79186859_79186939_79187018_79219675_79219837_79221628_79221743_79231839_79232009_79232525_79232604_79246603_79246720_79256046_79256154_79258019_79258127_79263445_79263518_79275564_79275642_79294086_79294163_79296112_79296249_79297968_79298089_79299923_79300130_79302293
ENSMUSG00000059003.13_0	chr16	-	4496	10	FSM	ENSMUSG00000059003.13	ENST00000675398.1	4516	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACACTTTTATGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	9579835	9394924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_9397491_9430433_9430622_9461962_9462124_9471259_9471490_9475537_9475664_9481044_9481199_9481302_9481472_9487568_9487775_9525467_9525583_9579254
ENSMUSG00000059005.14_0	chr2	+	3801	10	FSM	ENSMUSG00000059005.14	ENST00000676681.1	3816	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTCAATGTCACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	75489593	75498463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_13	chr2	+	1903	11	FSM	ENSMUSG00000059005.14	ENST00000679328.1	1920	11	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATAGCATTAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	75490132	75496416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75490278_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_21	chr2	+	5074	10	ISM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	2209	9	1699	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGTGTGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75491819	75499742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_3	chr2	+	3855	10	FSM	ENSMUSG00000059005.14	ENST00000677863.1	3870	10	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTCAATGTCACAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	75489593	75498463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493092_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_6	chr2	+	1644	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111964.8	1654	11	10	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAGTTAACACGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	75489614	75496183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75489734_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059005.14_7	chr2	+	5141	11	FSM	ENSMUSG00000059005.14	ENSMUST00000111962.8	5150	11	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGTGTGTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75489610	75499742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_75489668_75491809_75491933_75492014_75492162_75492239_75492451_75492830_75492921_75493004_75493101_75493188_75493270_75493914_75494059_75495371_75495495_75495577_75495646_75495741
ENSMUSG00000059013.13_0	chr2	+	3086	11	FSM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTTAAATTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32617726	32645512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32617819_32627530_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
ENSMUSG00000059013.13_1	chr2	+	2987	10	ISM	ENSMUSG00000059013.13	ENSMUST00000113242.5	3107	11	9811	21	9811	-21	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATAAAATTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	32627528	32645503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_32627571_32634762_32634892_32635846_32636302_32637033_32637159_32639164_32639698_32640963_32641080_32641525_32641698_32642625_32642738_32643000_32643208_32644407
ENSMUSG00000059027.15_0	chr4	-	3060	3	FSM	ENSMUSG00000059027.15	ENSMUST00000156790.8	3096	3	36	0	36	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	109514988	109508725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109510309_109511222_109511309_109513597
ENSMUSG00000059040.6_0	chr18	+	1751	2	FSM	ENSMUSG00000059040.6	ENSMUST00000076155.6	1791	2	6	34	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48178407	48181445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_48178513_48179799
ENSMUSG00000059040.6_1	chr18	+	1721	1	FSM	ENSMUSG00000059040.6	ENSMUST00000235307.2	1747	1	11	15	11	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	4401	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48179724	48181445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_48179700_48181400
ENSMUSG00000059060.16_0	chr12	+	1853	11	NNC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGAAACCCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79344055	79861457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_79344107_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374181_79704597_79704695_79813844_79813949_79849963_79850043_79860715
ENSMUSG00000059060.16_13	chr12	+	2181	11	NNC	ENSMUSG00000059060.16	novel	2187	11	NA	NA	0	-8	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGAACCGGGGTCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	79344336	79861144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_79345029_79347315_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374181_79704597_79704695_79813844_79813949_79849963_79850043_79860715
ENSMUSG00000059060.16_19	chr12	+	1787	10	NNC	ENSMUSG00000059060.16	novel	1858	11	NA	NA	2994	-7	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGAAACCCAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	79347330	79861457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_79347422_79349249_79349364_79350105_79350223_79361605_79361743_79371740_79371861_79373994_79374181_79704597_79704695_79813844_79813949_79849963_79850043_79860715
ENSMUSG00000059070.17_0	chr7	+	2973	7	FSM	ENSMUSG00000059070.17	ENSMUST00000210640.2	2989	7	10	6	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	45364890	45370254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45365267_45365571_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUSG00000059070.17_12	chr7	+	601	5	ISM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	1100	-2	1100	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	45368680	45370254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUSG00000059070.17_3	chr7	+	672	6	FSM	ENSMUSG00000059070.17	ENSMUST00000072503.13	679	6	2	5	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTCCTCTGTGTTCATTC	NA	NA	NA	NA	NA	NA	NA	NA	45367496	45370254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45367564_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUSG00000059070.17_8	chr7	+	1016	6	FSM	ENSMUSG00000059070.17	ENSMUST00000209287.2	1027	6	7	4	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGATGATGGTCCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	45367587	45370248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45368005_45368676_45368764_45368952_45369061_45369343_45369443_45369717_45369912_45370137
ENSMUSG00000059089.5_0	chr1	+	1244	5	FSM	ENSMUSG00000059089.5	ENSMUST00000078825.5	1256	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCAGCAGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	170846500	170857330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170846589_170847096_170847118_170847464_170847720_170853112_170853368_170856705
ENSMUSG00000059089.5_1	chr1	+	1159	4	ISM	ENSMUSG00000059089.5	ENSMUST00000078825.5	1256	5	605	0	605	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCAGCAGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	170847093	170857330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_170847118_170847464_170847720_170853112_170853368_170856705
ENSMUSG00000059108.5_0	chr7	-	652	2	FSM	ENSMUSG00000059108.5	ENSMUST00000081924.5	663	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGATTGTGGTGAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	140596810	140595618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140596073_140596612
ENSMUSG00000059119.10_0	chr7	-	2272	16	FSM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	0	13	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143102829	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_1	chr7	-	2223	15	ISM	ENSMUSG00000059119.10	ENSMUST00000072727.7	2285	16	7312	13	7048	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143095517	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484
ENSMUSG00000059119.10_12	chr7	-	2265	15	FSM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143102553	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102473
ENSMUSG00000059119.10_13	chr7	-	1556	16	FSM	ENSMUSG00000059119.10	ENST00000380542.9	1565	16	4	5	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143102845	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143067358_143068088_143068375_143072586_143072623_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_14	chr7	-	1558	15	FSM	ENSMUSG00000059119.10	ENST00000620138.4	1577	15	14	5	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143102883	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143067358_143068088_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143080880_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_4	chr7	-	2249	15	FSM	ENSMUSG00000059119.10	ENSMUST00000208190.2	2259	15	1	9	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143102842	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484_143095516_143102778
ENSMUSG00000059119.10_5	chr7	-	2186	14	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	7049	4	7049	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143095516	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924_143093984_143095484
ENSMUSG00000059119.10_7	chr7	-	2156	13	ISM	ENSMUSG00000059119.10	ENSMUST00000209098.2	2281	15	8580	4	8580	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAAACTGAGATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	143093985	143067328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_143068375_143074120_143074178_143075137_143075168_143077897_143078018_143078430_143078454_143080902_143081049_143083154_143083295_143086045_143086118_143088022_143088155_143089387_143089475_143089634_143089777_143091953_143092054_143093924
ENSMUSG00000059136.5_0	chr7	+	11476	3	FSM	ENSMUSG00000059136.5	ENSMUST00000218865.2	11486	3	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCAGGGCCAAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	140239843	140258484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140239921_140245627_140245729_140247186
ENSMUSG00000059136.5_2	chr7	+	11407	2	ISM	ENSMUSG00000059136.5	ENSMUST00000218865.2	11486	3	5783	3	-1576	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCAAAAAGGGGGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	140245625	140258490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_140245729_140247186
ENSMUSG00000059142.17_0	chr17	-	5671	5	FSM	ENSMUSG00000059142.17	ENSMUST00000088696.13	5683	5	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAACTTTTGCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	23086072	23066460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23071741_23076223_23076351_23080479_23080536_23084220_23084311_23085954
ENSMUSG00000059146.13_0	chr7	-	2946	19	FSM	ENSMUSG00000059146.13	ENST00000357724.6	2980	19	6	28	6	9	multi-exon	TRUE	canonical	NA	NA	NA	NA	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAACAAAAGAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78228089	77842145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663_78227855_78228006
ENSMUSG00000059146.13_1	chr7	-	2905	18	FSM	ENSMUSG00000059146.13	ENST00000355254.6	2938	18	3	30	3	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	78228092	77842147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_77842493_77848540_77848700_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663_78227855_78228006
ENSMUSG00000059146.13_2	chr7	-	2861	18	ISM	ENSMUSG00000059146.13	ENST00000357724.6	2980	19	241	30	-124	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	78227854	77842147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_77842493_77848540_77848700_77853850_77853893_77896902_77897147_77900448_77900622_77910031_77910163_78005774_78005964_78100634_78100738_78101638_78101704_78110028_78110326_78110792_78110935_78111333_78111477_78112532_78112691_78127611_78127681_78166476_78166549_78167166_78167242_78227283_78227547_78227663
ENSMUSG00000059173.20_0	chr2	-	2000	14	FSM	ENSMUSG00000059173.20	ENST00000409365.5	2018	14	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAACAGGTAATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	79869232	79669239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_79669346_79695381_79695570_79695965_79696087_79698573_79698656_79705346_79705468_79705572_79705675_79708466_79708593_79718184_79718286_79727408_79727550_79728409_79728527_79732155_79732223_79736333_79736517_79758018_79758133_79868801
ENSMUSG00000059182.9_0	chr6	-	3370	13	FSM	ENSMUSG00000059182.9	ENSMUST00000204778.3	3382	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGTTATGATGCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	51989520	51834404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980736_51989314
ENSMUSG00000059182.9_7	chr6	-	1553	13	FSM	ENSMUSG00000059182.9	ENSMUST00000078214.8	1583	13	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGTAGAGATGACTTA	NA	NA	NA	NA	NA	NA	NA	NA	51989473	51836153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_51836551_51836978_51837080_51851454_51851568_51856750_51856829_51884866_51885002_51885348_51885413_51886279_51886405_51898259_51898344_51899242_51899321_51972996_51973105_51980060_51980087_51980629_51980715_51989314
ENSMUSG00000059183.13_0	chr9	+	2028	9	FSM	ENSMUSG00000059183.13	ENSMUST00000074792.7	2042	9	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAACAAAAAAAGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	65343070	65360329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65343290_65344269_65344480_65346811_65346935_65347627_65347731_65348894_65348971_65351160_65351253_65354505_65354585_65355977_65356061_65359286
ENSMUSG00000059195.11_0	chr4	+	1886	1	FSM	ENSMUSG00000059195.11	ENSMUST00000121430.2	1128	1	-67	-691	-67	691	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTAACTGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103420531	103422417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_103420500_103422400
ENSMUSG00000059208.16_0	chr17	-	3912	15	Fusion	ENSMUSG00000079557.12_ENSMUSG00000059208.16	novel	2370	17	NA	NA	8	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33905826	33865212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
ENSMUSG00000059208.16_5	chr17	-	2351	16	NIC	ENSMUSG00000059208.16	novel	2370	17	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	1901	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGGCTTGCCTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33904382	33865212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_33865634_33867786_33867839_33868568_33869372_33871246_33871301_33877361_33877440_33877843_33877889_33879186_33879289_33882198_33882260_33883558_33883609_33884465_33884620_33885467_33885504_33885620_33885660_33887958_33888053_33889054_33889108_33896247_33896415_33904240
ENSMUSG00000059248.14_0	chr11	+	3607	12	FSM	ENSMUSG00000059248.14	ENSMUST00000093907.11	3616	12	9	0	-9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTCTTTGGCAAGACCT	NA	NA	NA	NA	NA	NA	NA	NA	117090495	117253151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117090600_117109700_117109758_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_14	chr11	+	3767	11	FSM	ENSMUSG00000059248.14	ENSMUST00000019038.15	3784	11	8	9	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117157079	117253130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117157422_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_2	chr11	+	1569	9	FSM	ENSMUSG00000059248.14	ENST00000591198.5	1586	9	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATCGAAGGTATTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	117090511	117247525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117090600_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438
ENSMUSG00000059248.14_23	chr11	+	2916	10	FSM	ENSMUSG00000059248.14	ENSMUST00000100193.8	2924	10	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117222549	117253130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117222680_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_25	chr11	+	2922	10	FSM	ENSMUSG00000059248.14	ENSMUST00000106349.2	2932	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCTCTTTGGCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	117223180	117253150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117223297_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059248.14_9	chr11	+	3843	11	FSM	ENSMUSG00000059248.14	ENSMUST00000106354.9	3869	11	17	9	17	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAAACTTTTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	117123127	117253130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117123546_117181223_117181863_117242254_117242447_117242974_117243104_117243432_117243515_117243913_117244052_117245635_117245754_117247160_117247257_117247438_117247536_117250244_117250297_117251248
ENSMUSG00000059263.10_0	chr7	+	5725	27	FSM	ENSMUSG00000059263.10	ENST00000339865.9	5736	27	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGTCCAGGCCTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	111622604	111710874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_111622954_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_22	chr7	+	5528	28	FSM	ENSMUSG00000059263.10	ENSMUST00000106653.4	5540	28	7	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTGCTGTGTTATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	111622717	111710586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059263.10_24	chr7	+	4664	29	FSM	ENSMUSG00000059263.10	ENSMUST00000215510.2	4697	29	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGCCATGAATGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	111622738	111709683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_111622954_111652423_111652628_111654048_111654163_111655681_111655821_111658178_111658276_111662452_111662599_111663571_111663652_111666291_111666442_111673678_111673775_111673863_111674017_111676998_111677167_111679378_111679439_111681636_111681769_111682294_111682372_111683063_111683120_111685201_111685315_111686207_111686313_111686972_111687181_111688731_111688848_111690611_111690732_111691912_111692694_111700944_111701121_111701645_111701727_111703156_111703273_111703556_111703676_111705985_111706117_111707642_111707691_111707780_111707912_111709151
ENSMUSG00000059273.10_0	chr7	+	6010	14	FSM	ENSMUSG00000059273.10	ENSMUST00000098789.5	6039	14	19	10	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAAACAGTCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	16135150	16171610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16135232_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16166698_16166948_16167945
ENSMUSG00000059273.10_6	chr7	+	5826	14	FSM	ENSMUSG00000059273.10	ENSMUST00000209289.2	5853	14	21	6	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGTCTGTGAGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	16135152	16171615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16135232_16136379_16136442_16150697_16150918_16151215_16151327_16154082_16154306_16155280_16155433_16156113_16156211_16156302_16156443_16157772_16157884_16159179_16159292_16159635_16159746_16162915_16163275_16163455_16163836_16167945
ENSMUSG00000059277.13_0	chr7	-	2476	5	FSM	ENSMUSG00000059277.13	ENSMUST00000133630.8	2482	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGGTTTCAGTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	142607148	142575520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142577056_142587360_142587664_142591017_142591119_142598231_142598394_142606773
ENSMUSG00000059277.13_1	chr7	-	1655	5	FSM	ENSMUSG00000059277.13	ENSMUST00000131129.2	1682	5	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGTAACTTAAAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	142607396	142587029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142587664_142591017_142591119_142592915_142593051_142598231_142598394_142606773
ENSMUSG00000059278.10_0	chr11	+	652	3	FSM	ENSMUSG00000059278.10	ENSMUST00000144531.2	671	3	10	9	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAAAGTGGCCTGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	69286482	69287497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69286799_69287002_69287187_69287345
ENSMUSG00000059278.10_7	chr11	+	696	2	FSM	ENSMUSG00000059278.10	ENST00000333775.9	715	2	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACCAAAGTGGCCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	69286639	69287494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69287187_69287345
ENSMUSG00000059288.15_0	chr13	+	3464	10	FSM	ENSMUSG00000059288.15	ENSMUST00000075220.14	3470	10	1	5	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGGGAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35843816	36058041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_35843977_35853794_35853932_35867728_35867822_35974083_35974159_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ENSMUSG00000059288.15_1	chr13	+	3567	7	FSM	ENSMUSG00000059288.15	ENSMUST00000163595.3	3575	7	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACATTGGGAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	35925303	36058041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_35925872_35999891_36000559_36040645_36040903_36042058_36042232_36047181_36047393_36055560_36055705_36056494
ENSMUSG00000059291.16_0	chr4	-	833	6	FSM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135780704	135777041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877_135780029_135780658
ENSMUSG00000059291.16_1	chr4	-	779	5	ISM	ENSMUSG00000059291.16	ENSMUST00000102536.11	833	6	684	0	684	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGGTTTGGATTTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	135780020	135777041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_135777328_135777590_135777702_135778481_135778614_135778924_135779032_135779877
ENSMUSG00000059305.13_0	chr16	-	394	2	FSM	ENSMUSG00000059305.13	ENST00000302273.2	405	2	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGAAAAGTCGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	16686989	16686494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_16686829_16686929
ENSMUSG00000059305.13_1	chr16	-	328	1	ISM	ENSMUSG00000059305.13	ENSMUST00000075017.5	766	2	297	228	169	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGAAAAGTCGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	16686822	16686494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_16686500_16686800
ENSMUSG00000059316.3_0	chr2	+	4037	13	FSM	ENSMUSG00000059316.3	ENSMUST00000080065.3	4054	13	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAGAATTGACCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	29692655	29707527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29692973_29694171_29694339_29695627_29696023_29697367_29697527_29699673_29699744_29699847_29699940_29700872_29700983_29701197_29701408_29701580_29701708_29702276_29702415_29702563_29702729_29702799_29702947_29705587
ENSMUSG00000059323.15_0	chr15	-	4218	26	FSM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATTTGTGTCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76524146	76510442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877_76523974_76524053
ENSMUSG00000059323.15_1	chr15	-	4125	25	ISM	ENSMUSG00000059323.15	ENSMUST00000168185.8	4235	26	185	5	185	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATTTGTGTCAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	76523973	76510442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76510683_76512948_76513083_76513456_76513531_76513865_76514042_76514676_76514849_76515030_76515333_76515993_76516073_76516160_76516312_76516806_76516884_76516972_76517704_76517785_76517910_76517990_76518155_76518244_76518318_76518764_76518855_76518968_76519052_76520315_76520506_76520761_76520888_76521140_76521294_76521379_76521526_76522051_76522167_76522241_76522414_76522671_76522802_76523039_76523224_76523647_76523791_76523877
ENSMUSG00000059325.15_0	chr5	-	1098	3	FSM	ENSMUSG00000059325.15	ENSMUST00000113453.9	1113	3	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAAAATTCATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77243119	77234844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77235664_77242712_77242870_77242997
ENSMUSG00000059325.15_1	chr5	-	1201	2	FSM	ENSMUSG00000059325.15	ENSMUST00000120827.9	1217	2	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTGAAAATTCATGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	77243094	77234844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_77235664_77242712
ENSMUSG00000059326.8_0	chr19	-	1838	12	FSM	ENSMUSG00000059326.8	ENSMUST00000076046.7	1849	12	2	9	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACATTTTCTGCTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	61216854	61212848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_61213472_61213570_61213653_61213761_61213859_61213960_61214091_61214229_61214260_61214365_61214494_61214652_61214823_61214962_61215093_61215243_61215365_61215467_61215623_61215709_61215804_61216776
ENSMUSG00000059327.10_0	chrX	+	4351	7	FSM	ENSMUSG00000059327.10	ENST00000374553.6	4366	7	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCTCCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	99353604	99444344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99353706_99425060_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
ENSMUSG00000059327.10_6	chrX	+	4251	6	ISM	ENSMUSG00000059327.10	ENST00000374553.6	4366	7	71463	7	71463	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAGTGCTCCCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	99425059	99444344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_99425085_99433307_99433488_99434946_99434982_99435938_99435991_99438624_99438750_99440510
ENSMUSG00000059336.15_0	chr18	-	3659	9	FSM	ENSMUSG00000059336.15	ENSMUST00000091813.12	3665	9	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCAGTCTCATGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	78166638	78143308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_78145784_78147244_78147295_78152806_78152942_78153123_78153272_78154568_78154762_78156880_78157010_78158935_78159126_78159587_78159745_78166456
ENSMUSG00000059355.14_0	chr8	+	910	4	FSM	ENSMUSG00000059355.14	ENSMUST00000079764.14	922	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTTGCTTCTCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	85807379	85808967	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85807693_85807801_85807908_85808405_85808504_85808574
ENSMUSG00000059355.14_2	chr8	+	465	4	FSM	ENSMUSG00000059355.14	ENST00000222190.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807642	85808791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85807693_85807801_85807908_85808411_85808504_85808574
ENSMUSG00000059355.14_6	chr8	+	408	3	ISM	ENSMUSG00000059355.14	ENST00000222190.9	465	4	166	0	166	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGGGCCCTGCTTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	85807808	85808791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_85807908_85808411_85808504_85808574
ENSMUSG00000059363.11_1	chr19	-	1096	5	FSM	ENSMUSG00000059363.11	ENSMUST00000081333.11	1114	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAGCCTCAAAATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	24257960	24238825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24239418_24244665_24244764_24249710_24249832_24254544_24254640_24257770
ENSMUSG00000059406.9_0	chr10	+	3287	17	FSM	ENSMUSG00000059406.9	ENST00000648592.1	3303	17	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGATTGCCCTGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	80715652	80735166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80715798_80718468_80718597_80719552_80719621_80719776_80719953_80721859_80722014_80723217_80723390_80724119_80724395_80725163_80725301_80726011_80726331_80727990_80728163_80728819_80729092_80730124_80730262_80730635_80731042_80733031_80733204_80733677_80733941_80734018_80734156_80735012
ENSMUSG00000059409.10_0	chr17	-	3029	15	FSM	ENSMUSG00000059409.10	ENSMUST00000233988.2	3038	15	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCTGAGTCGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47016031	46993919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011076_47015758
ENSMUSG00000059409.10_1	chr17	-	2912	15	FSM	ENSMUSG00000059409.10	ENSMUST00000002839.9	2926	15	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTCTGAGTCGCCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47015917	46993919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46995053_46995186_46995304_46995431_46995505_46995590_46995693_46996227_46996356_46996444_46996616_46996979_46997034_46997188_46997358_46997484_46997616_46997959_46998053_46998175_46998287_46998371_46998572_46998762_46998956_47010994_47011073_47015758
ENSMUSG00000059412.8_0	chr9	+	625	6	FSM	ENSMUSG00000059412.8	ENSMUST00000041005.6	632	6	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGTGAGTGCTTATCATT	NA	NA	NA	NA	NA	NA	NA	NA	45314441	45321575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_45314599_45319403_45319443_45319597_45319673_45320810_45320848_45321000_45321032_45321289
ENSMUSG00000059429.4_0	chr2	+	5344	2	FSM	ENSMUSG00000059429.4	ENSMUST00000218602.2	5374	2	14	16	14	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATCAAATAAATAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	37080299	37096015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_37080341_37090712
ENSMUSG00000059429.4_1	chr2	+	5301	1	FSM	ENSMUSG00000059429.4	ENSMUST00000074168.2	939	1	-538	-3824	-538	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAATAAATAAATTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	37090716	37096017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_37090700_37096000
ENSMUSG00000059430.15_0	chr6	-	1258	8	FSM	ENSMUSG00000059430.15	ENST00000409731.7	1269	8	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCAAGAATTATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	83513237	83489822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83504297_83504460_83513161
ENSMUSG00000059430.15_1	chr6	-	1183	7	ISM	ENSMUSG00000059430.15	ENST00000409731.7	1269	8	8781	7	512	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTCAAGAATTATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	83504460	83489822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83504297
ENSMUSG00000059430.15_10	chr6	-	1322	9	FSM	ENSMUSG00000059430.15	ENSMUST00000075161.12	1333	9	6	5	0	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTGTGAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83513241	83489891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297_83504460_83513161
ENSMUSG00000059430.15_11	chr6	-	1242	8	ISM	ENSMUSG00000059430.15	ENSMUST00000121731.8	1273	9	513	-2	513	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTCTGTGTGAGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	83504459	83489891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_83490111_83493249_83493432_83496749_83496942_83497637_83497800_83499797_83499883_83500149_83500261_83503787_83503917_83504297
ENSMUSG00000059434.10_0	chr5	+	1756	18	FSM	ENSMUSG00000059434.10	ENST00000264717.7	1783	18	18	9	18	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACGCAGCATCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	31455524	31484391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31455665_31456057_31456127_31456901_31456971_31457342_31457417_31457922_31457990_31458155_31458210_31459500_31459596_31462312_31462419_31463831_31463951_31464409_31464509_31464664_31464763_31465098_31465176_31465528_31465626_31466179_31466282_31466364_31466449_31481915_31482066_31483700_31483836_31484270
ENSMUSG00000059436.14_1	chr12	-	1911	4	FSM	ENSMUSG00000059436.14	ENSMUST00000082136.7	1926	4	11	4	-5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTTGTCGGTAGTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	77008964	76984051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76985530_76986740_76986865_76999942_77000051_77008763
ENSMUSG00000059436.14_2	chr12	-	1596	2	FSM	ENSMUSG00000059436.14	ENST00000555932.5	1611	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTATAAGAATATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	77008911	76984081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76985530_77008763
ENSMUSG00000059436.14_3	chr12	-	3036	4	FSM	ENSMUSG00000059436.14	ENST00000284165.10	3053	4	11	6	-5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACTGCCCAAGAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	77008926	76984126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76986865_76999942_77000051_77008036_77008064_77008763
ENSMUSG00000059436.14_4	chr12	-	539	4	FSM	ENSMUSG00000059436.14	ENST00000555667.5	564	4	14	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAAAATAACATGAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	77008956	76986174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76986289_76986740_76986865_76999942_77000051_77008763
ENSMUSG00000059436.14_5	chr12	-	551	5	FSM	ENSMUSG00000059436.14	ENST00000557746.5	564	5	7	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCACTTCTCTTCCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	77008963	76986250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76986289_76986423_76986505_76986740_76986865_76999942_77000051_77008763
ENSMUSG00000059439.16_0	chr11	+	2908	16	FSM	ENSMUSG00000059439.16	ENSMUST00000108056.8	2925	16	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATAGAATATCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	85244002	85401810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_85244060_85245419_85245488_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253
ENSMUSG00000059439.16_1	chr11	+	3723	27	FSM	ENSMUSG00000059439.16	ENSMUST00000108062.8	3724	27	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	85243992	85716883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474821_85692610_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUSG00000059439.16_20	chr11	+	3660	26	NNC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	1678	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	85245715	85716883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474824_85692607_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUSG00000059439.16_3	chr11	+	3812	28	NNC	ENSMUSG00000059439.16	novel	3810	28	NA	NA	3	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	85243995	85716883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_85244060_85245419_85245506_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474824_85692607_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUSG00000059439.16_7	chr11	+	3728	27	NNC	ENSMUSG00000059439.16	novel	3724	27	NA	NA	1	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGAGTTGCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	85243993	85716883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr11_+_85244060_85245713_85245802_85250450_85250506_85256377_85256454_85261882_85261990_85286164_85286247_85306477_85306551_85342486_85342595_85348693_85348771_85356984_85357062_85361577_85361662_85367463_85367635_85373468_85373563_85386653_85386788_85400253_85400519_85422618_85422770_85434753_85434799_85445015_85445141_85448148_85448315_85449896_85449998_85467607_85467709_85471867_85472065_85474722_85474824_85692607_85692779_85704825_85704892_85712847_85712939_85716027
ENSMUSG00000059447.14_0	chr5	+	2021	16	FSM	ENSMUSG00000059447.14	ENSMUST00000026841.15	2033	16	6	6	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCGTAGTCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30360251	30389585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30360338_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_10	chr5	+	2034	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114783.6	2045	16	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGAGGACTGTTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	30360275	30389575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30360385_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_11	chr5	+	2035	16	FSM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	6	7	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGACTGTTCGTAGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	30360275	30389580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30360381_30368666_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059447.14_24	chr5	+	1937	15	ISM	ENSMUSG00000059447.14	ENSMUST00000114786.8	2048	16	8395	2	8395	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTCGTAGTCTCGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	30368664	30389585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_30368742_30369023_30369069_30371662_30371763_30373521_30373567_30374493_30374594_30377623_30377712_30378807_30378996_30379788_30379970_30381885_30382008_30383637_30383718_30383794_30383843_30384549_30384638_30385312_30385388_30385918_30386084_30389050
ENSMUSG00000059456.14_0	chr14	-	4018	31	FSM	ENSMUSG00000059456.14	ENSMUST00000022622.14	4034	31	15	1	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGACTGTGTCGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	66518486	66390706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66400473_66400600_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
ENSMUSG00000059456.14_3	chr14	-	3897	30	FSM	ENSMUSG00000059456.14	ENSMUST00000089250.9	3903	30	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGCTTGACTGTGTCGG	NA	NA	NA	NA	NA	NA	NA	NA	66518495	66390710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_66391719_66393420_66393502_66393738_66393877_66394509_66394557_66395496_66395522_66395832_66395869_66395979_66396127_66402712_66402779_66404115_66404225_66406691_66406897_66407686_66407777_66407932_66408034_66409131_66409248_66409507_66409609_66409924_66410010_66410754_66410853_66411286_66411338_66412197_66412245_66412621_66412662_66413072_66413191_66414511_66414614_66415140_66415216_66415484_66415626_66416040_66416096_66416279_66416343_66424891_66424972_66427022_66427111_66427504_66427684_66450760_66451002_66518331
ENSMUSG00000059474.14_1	chr11	+	5274	17	FSM	ENSMUSG00000059474.14	ENST00000586178.6	5295	17	13	8	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAAGCTTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	93777031	93837797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93777243_93777847_93777900_93795984_93796185_93799629_93799764_93801108_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059474.14_26	chr11	+	5004	15	FSM	ENSMUSG00000059474.14	ENST00000415868.5	5020	15	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTAAGCTTTATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	93795991	93837797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_93796185_93799629_93799764_93801108_93801224_93803201_93803285_93812192_93812311_93813971_93814107_93814616_93814706_93815250_93815486_93816492_93816549_93817047_93817153_93820439_93820588_93822638_93822722_93823045_93823281_93824706_93824785_93834600
ENSMUSG00000059475.14_0	chr9	-	3543	7	FSM	ENSMUSG00000059475.14	ENSMUST00000115562.9	3557	7	14	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTTCTAGTTTTATTTG	NA	NA	NA	NA	NA	NA	NA	NA	20404028	20379844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20403681
ENSMUSG00000059475.14_4	chr9	-	3085	8	ISM	ENSMUSG00000059475.14	ENSMUST00000169558.8	3160	9	315	6	315	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGGAGGAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20403723	20380009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389455_20397625_20397734_20403681
ENSMUSG00000059475.14_5	chr9	-	3153	9	FSM	ENSMUSG00000059475.14	ENSMUST00000169558.8	3160	9	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTTGGAGGAGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20404037	20380009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389455_20397625_20397734_20403681_20403748_20403993
ENSMUSG00000059475.14_7	chr9	-	2361	8	ISM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	295	7	295	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGTAATAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	20403743	20380849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681
ENSMUSG00000059475.14_8	chr9	-	2410	9	FSM	ENSMUSG00000059475.14	ENSMUST00000080386.13	2417	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGTAATAAAAAAAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	20404038	20380849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20382545_20382994_20383078_20384323_20384405_20386202_20386330_20387691_20387775_20389428_20389551_20397625_20397734_20403681_20403748_20403993
ENSMUSG00000059479.8_0	chr7	+	1452	2	FSM	ENSMUSG00000059479.8	ENSMUST00000076034.8	1463	2	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCAAGGCCAGGAGCGAT	NA	NA	NA	NA	NA	NA	NA	NA	25327066	25328910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25327148_25327539
ENSMUSG00000059481.6_0	chr17	+	900	7	FSM	ENSMUSG00000059481.6	ENST00000454031.6	921	7	10	11	10	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGAATAACTGACTAGG	NA	NA	NA	NA	NA	NA	NA	NA	12621957	12637999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_12622120_12622899_12623049_12624058_12624153_12627876_12628001_12633064_12633172_12637552_12637670_12637852
ENSMUSG00000059482.16_0	chr4	+	2107	6	FSM	ENSMUSG00000059482.16	ENSMUST00000080517.14	2116	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	10874506	10899421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897898
ENSMUSG00000059482.16_5	chr4	+	2044	6	FSM	ENSMUSG00000059482.16	ENSMUST00000101504.3	2053	6	5	4	5	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTCTCTGTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	10874572	10899421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_10874773_10879522_10879611_10881800_10881869_10882406_10882473_10893262_10893359_10897895
ENSMUSG00000059486.12_0	chr6	-	3794	4	FSM	ENSMUSG00000059486.12	ENSMUST00000114323.8	3816	4	13	9	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATCAGTATCTGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	56774708	56754517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_56757399_56758785_56758952_56766203_56766686_56774443
ENSMUSG00000059493.14_0	chrX	-	8134	8	FSM	ENSMUSG00000059493.14	ENST00000617601.4	8149	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAGACCAAGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	160709562	160616298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_160620418_160622794_160622922_160623200_160626180_160627167_160627300_160630017_160630211_160654464_160654599_160658235_160658389_160709265
ENSMUSG00000059495.15_0	chr9	-	10722	41	FSM	ENSMUSG00000059495.15	ENSMUST00000165665.9	10752	41	19	11	19	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACTGAGTATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	43017263	42875148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919408_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42951835_42951893_42953886_42953973_42955559_42955584_43016473
ENSMUSG00000059495.15_6	chr9	-	6779	40	FSM	ENSMUSG00000059495.15	ENST00000356641.7	6788	40	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGGCAGCCTCTTACA	NA	NA	NA	NA	NA	NA	NA	NA	43016824	42878592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_42880489_42881008_42881079_42882288_42882603_42883290_42883762_42885852_42886087_42886328_42886409_42886523_42886611_42887328_42887417_42888931_42889100_42889501_42889578_42890691_42890770_42893243_42893345_42895669_42895785_42897757_42897884_42900255_42900342_42901270_42901418_42903169_42903325_42903831_42903868_42904284_42904418_42908869_42909083_42910361_42910468_42911243_42911359_42911652_42911686_42912264_42912403_42912741_42912848_42913153_42913197_42916839_42916939_42917131_42917243_42919311_42919405_42921474_42921550_42927198_42927340_42929347_42929468_42929630_42929709_42931900_42932080_42934110_42934169_42937475_42937526_42938492_42938592_42953886_42953973_42955559_42955584_43016473
ENSMUSG00000059498.14_0	chr1	-	1326	5	FSM	ENSMUSG00000059498.14	ENSMUST00000164044.8	1347	5	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATCTCCTTTTGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	170886951	170878743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170879422_170881507_170881763_170885259_170885518_170886154_170886176_170886837
ENSMUSG00000059518.15_0	chr5	-	1194	5	FSM	ENSMUSG00000059518.15	ENSMUST00000156963.8	1208	5	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAAGGTCAGGGTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	137016863	137011019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137016342
ENSMUSG00000059518.15_4	chr5	-	725	5	FSM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137015746	137011049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732_137013904_137015664
ENSMUSG00000059518.15_5	chr5	-	644	4	ISM	ENSMUSG00000059518.15	ENSMUST00000085941.12	740	5	1851	6	1851	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTGCCTGCTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137013904	137011049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_137011272_137011371_137011542_137011721_137011802_137013732
ENSMUSG00000059534.9_0	chr11	-	520	2	FSM	ENSMUSG00000059534.9	ENST00000401406.3	536	2	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCGTGCCCAAGCCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	4654320	4651920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4652221_4654100
ENSMUSG00000059534.9_1	chr11	-	421	2	FSM	ENSMUSG00000059534.9	ENSMUST00000058407.6	434	2	7	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGACCGGCTTTTGCACG	NA	NA	NA	NA	NA	NA	NA	NA	4654335	4651978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_4652221_4654156
ENSMUSG00000059540.16_0	chr2	+	1169	10	FSM	ENSMUSG00000059540.16	ENSMUST00000103042.10	1183	10	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGGGTCCTGTCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	181322116	181329864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181322269_181325005_181325069_181325340_181325447_181326235_181326327_181327584_181327716_181327982_181328040_181328390_181328546_181328620_181328768_181329406_181329479_181329669
ENSMUSG00000059552.14_0	chr11	+	1847	11	FSM	ENSMUSG00000059552.14	ENSMUST00000171247.8	1867	11	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTTATATGGTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	69471197	69482691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482079
ENSMUSG00000059552.14_1	chr11	+	1752	11	FSM	ENSMUSG00000059552.14	ENSMUST00000108658.10	1771	11	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACTTATATGGTTTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	69471196	69482691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69471342_69477716_69477800_69478082_69478105_69478197_69478459_69479189_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480689_69481481_69481589_69482175
ENSMUSG00000059552.14_11	chr11	+	855	7	FSM	ENSMUSG00000059552.14	ENST00000504290.5	873	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGACTGCCTCTGCATC	NA	NA	NA	NA	NA	NA	NA	NA	69479180	69482250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69479374_69479451_69479565_69479966_69480077_69480398_69480536_69480614_69480705_69481451_69481589_69482175
ENSMUSG00000059554.13_0	chr10	-	1173	6	FSM	ENSMUSG00000059554.13	ENSMUST00000080860.13	1190	6	8	9	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCGTCATCTCTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	18110736	18089432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_18089927_18092007_18092031_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUSG00000059554.13_2	chr10	-	2244	5	FSM	ENSMUSG00000059554.13	ENSMUST00000052648.9	2255	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGCAGAAGGAAAGAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	18110720	18092536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_18094141_18095235_18095391_18100644_18100809_18106166_18106367_18110599
ENSMUSG00000059555.7_0	chr2	-	3237	2	FSM	ENSMUSG00000059555.7	ENSMUST00000081869.7	3255	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTACCCACCCACCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25086887	25082984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25085938_25086603
ENSMUSG00000059562.15_0	chr17	+	1437	12	FSM	ENSMUSG00000059562.15	ENST00000389176.3	1451	12	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGCAGCTGAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25383074	25390646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25383165_25383480_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059562.15_5	chr17	+	1349	11	ISM	ENSMUSG00000059562.15	ENST00000389176.3	1451	12	412	6	412	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGGCAGCTGAGAGCCT	NA	NA	NA	NA	NA	NA	NA	NA	25383478	25390646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_25383605_25386270_25386373_25386661_25386809_25386860_25386989_25387283_25387411_25387501_25387645_25389090_25389205_25389532_25389610_25389843_25389962_25390099_25390181_25390460
ENSMUSG00000059586.11_0	chr15	+	2662	5	FSM	ENSMUSG00000059586.11	ENSMUST00000168722.3	2679	5	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTACTGATTTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	59246107	59411508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59409375
ENSMUSG00000059586.11_1	chr15	+	1111	8	FSM	ENSMUSG00000059586.11	ENSMUST00000227173.2	1122	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAACTTTGATAATCC	NA	NA	NA	NA	NA	NA	NA	NA	59246133	59473510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59368625_59368704_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_3	chr15	+	1042	7	FSM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	4	8	4	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCAGCTCAGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	59246139	59473525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_59246205_59250716_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059586.11_4	chr15	+	971	6	ISM	ENSMUSG00000059586.11	ENSMUST00000079703.11	1054	7	4587	8	4587	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCAGCTCAGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	59250722	59473525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_59250888_59287873_59287981_59327161_59327316_59463545_59463647_59463986_59464094_59473188
ENSMUSG00000059588.14_0	chr2	-	4845	16	FSM	ENSMUSG00000059588.14	ENSMUST00000074262.9	4882	16	29	8	29	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAAACGACGATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	84255726	84160977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84164023_84168846_84168889_84169554_84169774_84175366_84175434_84175513_84175575_84178548_84178703_84181522_84181650_84198890_84198983_84200373_84200487_84200750_84200862_84203597_84203728_84205638_84205726_84206692_84206828_84207308_84207390_84237862_84237931_84255413
ENSMUSG00000059610.6_0	chr11	-	918	2	FSM	ENSMUSG00000059610.6	ENST00000641149.1	928	2	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGTGAAAAATGTAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	59464493	59461614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59462286_59464246
ENSMUSG00000059645.7_0	chr5	+	2990	5	FSM	ENSMUSG00000059645.7	ENSMUST00000074148.7	2995	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTACAAGTCTCTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	26462688	26469301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_26462899_26463885_26464046_26465303_26465448_26466082_26466267_26467009
ENSMUSG00000059659.8_0	chr6	+	3674	3	FSM	ENSMUSG00000059659.8	ENSMUST00000144745.4	3694	3	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAGAGAGGGGGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	128415729	128452570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_128416351_128416477_128416660_128449699
ENSMUSG00000059669.9_0	chr12	+	2180	15	FSM	ENSMUSG00000059669.9	ENSMUST00000075954.9	2209	15	15	14	15	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATACACAAGTAAATGACAC	NA	NA	NA	NA	NA	NA	NA	NA	24548372	24608524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559082_24559181_24559452_24559549_24564783_24564935_24566857_24567009_24573100_24573201_24594269_24594418_24597011_24597190_24597568_24597616_24599417_24599509_24605988_24606060_24606517_24606741_24608161
ENSMUSG00000059669.9_3	chr12	+	512	4	FSM	ENSMUSG00000059669.9	ENSMUST00000222710.2	521	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAAGTTATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24548609	24559738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_24548649_24550434_24550534_24554945_24555034_24559452
ENSMUSG00000059669.9_4	chr12	+	467	3	ISM	ENSMUSG00000059669.9	ENSMUST00000222710.2	521	4	1831	9	1831	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAAAAGTTATCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	24550440	24559738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_24550534_24554945_24555034_24559452
ENSMUSG00000059674.8_0	chr14	-	3360	13	FSM	ENSMUSG00000059674.8	ENST00000487137.7	3372	13	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1774	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGGAGCCCGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	54878785	54868690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54868991_54869080_54870070_54870503_54870753_54870915_54871028_54871106_54871229_54873789_54873927_54874777_54875032_54875460_54875649_54875783_54875952_54876024_54876145_54876327_54876623_54876800_54877119_54878677
ENSMUSG00000059689.16_0	chr6	+	1092	3	FSM	ENSMUSG00000059689.16	ENSMUST00000164472.8	1098	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATCAGGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117818202	117822910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117818230_117820213_117820354_117821985
ENSMUSG00000059689.16_2	chr6	+	1218	3	FSM	ENSMUSG00000059689.16	ENSMUST00000112860.2	1231	3	6	7	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATCAGGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117818247	117822910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117818359_117820213_117820354_117821943
ENSMUSG00000059689.16_3	chr6	+	1153	3	ISM	ENSMUSG00000059689.16	ENSMUST00000112861.8	1202	4	781	7	746	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATCAGGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117818987	117822910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_117819076_117820213_117820354_117821985
ENSMUSG00000059689.16_4	chr6	+	1053	2	ISM	ENSMUSG00000059689.16	ENSMUST00000112861.8	1202	4	2019	7	1984	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATCAGGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117820225	117822910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_117820354_117821985
ENSMUSG00000059689.16_5	chr6	+	1105	2	ISM	ENSMUSG00000059689.16	ENSMUST00000112860.2	1231	3	1974	7	1974	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATCAGGTATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117820215	117822910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_117820354_117821943
ENSMUSG00000059708.13_0	chrX	-	5968	7	FSM	ENSMUSG00000059708.13	ENSMUST00000051906.13	6003	7	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACTTTGGGAGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	35909019	35871972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_35876318_35877907_35877977_35878338_35878574_35882255_35882387_35887220_35887990_35900125_35900228_35908702
ENSMUSG00000059713.13_0	chr4	-	5094	5	FSM	ENSMUSG00000059713.13	ENSMUST00000030606.14	5111	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGCTCATTGAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	135161153	135139624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135143910_135145690_135145863_135147556_135147731_135152524_135152757_135160922
ENSMUSG00000059713.13_3	chr4	-	495	3	FSM	ENSMUSG00000059713.13	ENST00000436717.6	510	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCGGCTGGACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	135152695	135143757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135143910_135145690_135145863_135152524
ENSMUSG00000059713.13_4	chr4	-	638	4	FSM	ENSMUSG00000059713.13	ENST00000425530.3	654	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGCGGCTGGACTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	135152694	135143757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_135143910_135145690_135145833_135147556_135147731_135152524
ENSMUSG00000059714.14_0	chr17	+	1813	13	FSM	ENSMUSG00000059714.14	ENSMUST00000001569.15	1825	13	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTATACTTCTTTCCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	36134132	36143682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36134394_36134698_36134756_36135018_36135095_36135170_36135262_36135457_36135602_36135724_36135845_36136322_36136419_36136629_36136783_36140734_36140917_36141010_36141057_36141545_36141684_36141834_36142000_36143398
ENSMUSG00000059734.8_0	chr19	-	984	7	FSM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	14	7	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTACCTGTTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3962474	3958869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962202
ENSMUSG00000059734.8_1	chr19	-	770	7	FSM	ENSMUSG00000059734.8	ENSMUST00000237341.2	780	7	2	8	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACAGCTACCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3962772	3958874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962709
ENSMUSG00000059734.8_2	chr19	-	703	6	ISM	ENSMUSG00000059734.8	ENSMUST00000236801.2	1005	7	746	12	746	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACAGCTACCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3961742	3958874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688
ENSMUSG00000059734.8_3	chr19	-	968	7	FSM	ENSMUSG00000059734.8	ENSMUST00000075092.8	983	7	7	8	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACAGCTACCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3962727	3958874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962466
ENSMUSG00000059734.8_6	chr19	-	964	7	FSM	ENSMUSG00000059734.8	ENSMUST00000235847.2	977	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCACAGCTACCTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	3962726	3958874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3959075_3959152_3959282_3960897_3961071_3961160_3961257_3961565_3961617_3961688_3961747_3962469
ENSMUSG00000059742.11_1	chr2	-	2405	8	FSM	ENSMUSG00000059742.11	ENST00000328032.8	2422	8	16	1	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCCTGTGCTTTTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	63014611	62594832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_62595115_62607625_62608026_62617933_62618360_62667409_62667625_62680693_62681123_62707545_62707702_63012399_63012631_63014345
ENSMUSG00000059742.11_2	chr2	-	1844	6	FSM	ENSMUSG00000059742.11	ENST00000621889.1	1867	6	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATTACAGCTGTAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	62707684	62594879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_62595115_62607625_62608026_62617933_62618360_62667409_62667625_62680693_62681123_62707545
ENSMUSG00000059742.11_4	chr2	-	2410	8	NNC	ENSMUSG00000059742.11	novel	2422	8	NA	NA	7	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCCCTGTGCTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	63014615	62594834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_62595115_62607625_62608026_62617933_62618360_62667409_62667625_62680693_62681123_62707545_62707703_63012397_63012631_63014345
ENSMUSG00000059743.13_0	chr3	-	1226	10	FSM	ENSMUSG00000059743.13	ENSMUST00000081848.13	1237	10	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	89009259	89000898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89009168
ENSMUSG00000059743.13_1	chr3	-	1138	9	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	1054	4	1054	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	89008141	89000898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975
ENSMUSG00000059743.13_2	chr3	-	1340	10	ISM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	763	4	763	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	89008432	89000898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227
ENSMUSG00000059743.13_3	chr3	-	1378	11	FSM	ENSMUSG00000059743.13	ENSMUST00000196709.5	1382	11	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCCTGTGGTTTTATTC	NA	NA	NA	NA	NA	NA	NA	NA	89009195	89000898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89001151_89001537_89001673_89001758_89001837_89002166_89002240_89002320_89002410_89002660_89002784_89002905_89002987_89006606_89006748_89007975_89008139_89008227_89008444_89009168
ENSMUSG00000059751.8_0	chr13	+	769	1	FSM	ENSMUSG00000059751.8	ENSMUST00000074680.8	795	1	15	11	15	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGTATAAAATCCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	108807151	108807920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108807200_108807900
ENSMUSG00000059772.13_0	chr7	-	3135	6	FSM	ENSMUSG00000059772.13	ENSMUST00000144897.2	3152	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGACTCTTGGCTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	126294946	126288646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126290828_126290910_126290996_126291099_126291228_126291492_126291832_126291924_126291977_126294596
ENSMUSG00000059775.6_0	chr8	-	417	1	FSM	ENSMUSG00000059775.6	ENSMUST00000077208.6	449	1	7	25	7	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	108166204	108165787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_108165800_108166200
ENSMUSG00000059791.15_0	chr17	+	1444	4	FSM	ENSMUSG00000059791.15	ENSMUST00000074259.15	1466	4	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATGATATCCACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	36172221	36176284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36172410_36174330_36174528_36175003_36175181_36175402
ENSMUSG00000059791.15_1	chr17	+	974	3	FSM	ENSMUSG00000059791.15	ENST00000376420.9	983	3	9	0	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTCCACCTCAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	36172283	36176053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36172410_36174330_36174528_36175402
ENSMUSG00000059796.17_0	chr11	-	1773	11	FSM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	69563143	69557762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753_69561803_69563104
ENSMUSG00000059796.17_1	chr11	-	1688	9	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1568	0	1568	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGCTTCTTGTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	69561575	69557761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440
ENSMUSG00000059796.17_2	chr11	-	1733	10	ISM	ENSMUSG00000059796.17	ENSMUST00000163666.3	1774	11	1342	1	1342	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1671	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGCTTCTTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	69561801	69557762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69558444_69558520_69558601_69558847_69558938_69559021_69559160_69559230_69559375_69559469_69559580_69559903_69560073_69560958_69561099_69561440_69561574_69561753
ENSMUSG00000059810.19_0	chr4	+	3879	16	FSM	ENSMUSG00000059810.19	ENSMUST00000084521.11	3888	16	6	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62537762	62621252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62538025_62542081_62542164_62543333_62543440_62543978_62544331_62544728_62544769_62549360_62549558_62552682_62552767_62558953_62559066_62564920_62564965_62570950_62571074_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUSG00000059810.19_3	chr4	+	2740	7	FSM	ENSMUSG00000059810.19	ENSMUST00000107420.8	2752	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62592284	62621252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62592548_62607735_62608864_62615507_62615570_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUSG00000059810.19_4	chr4	+	1710	5	FSM	ENSMUSG00000059810.19	ENSMUST00000125369.8	1719	5	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGTCTCTGTGTATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62617708	62621252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62618132_62618234_62618337_62618590_62618653_62619270_62619438_62620296
ENSMUSG00000059811.14_0	chr17	-	3604	13	FSM	ENSMUSG00000059811.14	ENSMUST00000068282.7	3618	13	8	6	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTAGCAAGTGTTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	80203544	80155824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80157708_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUSG00000059811.14_13	chr17	-	2352	13	FSM	ENSMUSG00000059811.14	ENST00000419554.6	2370	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCAACTGTAGAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	80203458	80157505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80158223_80159953_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80183230_80183476_80203337
ENSMUSG00000059811.14_19	chr17	-	1214	10	FSM	ENSMUSG00000059811.14	ENST00000629272.2	1231	10	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGAAATTAGACAGGATT	NA	NA	NA	NA	NA	NA	NA	NA	80172216	80158126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80158223_80159949_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131
ENSMUSG00000059811.14_8	chr17	-	2876	12	FSM	ENSMUSG00000059811.14	ENST00000406122.5	2889	12	10	3	-2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCAAAACCTGGTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80203470	80156752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_80158223_80159949_80160386_80161262_80161335_80161982_80162040_80163564_80163693_80164536_80164676_80167215_80167309_80168531_80168589_80168857_80168909_80172131_80172237_80172470_80172606_80203337
ENSMUSG00000059820.15_0	chr9	-	3293	6	FSM	ENSMUSG00000059820.15	ENSMUST00000131351.8	3316	6	19	4	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTGCTCTGTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	50528745	50516543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50528527
ENSMUSG00000059820.15_2	chr9	-	3319	7	FSM	ENSMUSG00000059820.15	ENSMUST00000171462.8	3339	7	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACATTTGCTCTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	50528746	50516545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50519237_50520671_50520726_50521599_50521750_50523676_50523778_50526782_50526860_50527957_50527985_50528527
ENSMUSG00000059824.13_0	chr7	+	1817	4	FSM	ENSMUSG00000059824.13	ENSMUST00000080885.12	1837	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCTGCATCCAAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	45354525	45359621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45355187_45356029_45356441_45357683_45357896_45359088
ENSMUSG00000059824.13_1	chr7	+	1138	3	FSM	ENSMUSG00000059824.13	ENSMUST00000211513.2	1156	3	12	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCGCCTCCATCAACACAA	NA	NA	NA	NA	NA	NA	NA	NA	45354704	45359532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45355187_45357683_45357896_45359088
ENSMUSG00000059834.13_0	chr3	-	2994	21	FSM	ENSMUSG00000059834.13	ENSMUST00000026866.15	3005	21	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTATGTTGTCATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	41696942	41581158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41601879_41602077_41611638_41611832_41616006_41616153_41618386_41618462_41621545_41621618_41625819_41625919_41629762_41629941_41636130_41636223_41636716_41636808_41657820_41657892_41663903_41663970_41665517_41665641_41672163_41672300_41681527_41681584_41684725_41684799_41685295_41685355_41688602_41688671_41696429
ENSMUSG00000059834.13_5	chr3	-	736	7	FSM	ENSMUSG00000059834.13	ENST00000503215.5	755	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCATTTTCCATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	41672293	41581498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_41581670_41583952_41584049_41586087_41586167_41657820_41657892_41663903_41663970_41665517_41665641_41672163
ENSMUSG00000059842.13_0	chr2	+	3291	15	FSM	ENSMUSG00000059842.13	ENSMUST00000081926.13	3299	15	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGGCCTGAGTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	154455219	154488736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_154455323_154463672_154463784_154466774_154466972_154468697_154468848_154469807_154470054_154470719_154470916_154472328_154472420_154474198_154474390_154476006_154476198_154479933_154480143_154483235_154483333_154483901_154484035_154485408_154485521_154485706_154485778_154487543
ENSMUSG00000059851.16_0	chr7	+	2174	9	FSM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4743185	4750512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4743239_4744778_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_1	chr7	+	2122	8	ISM	ENSMUSG00000059851.16	ENSMUST00000108583.9	2177	9	1594	1	-57	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4744777	4750512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_4744981_4745120_4745287_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059851.16_2	chr7	+	1869	7	FSM	ENSMUSG00000059851.16	ENST00000630497.1	1881	7	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATATTGTAAGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4744843	4750491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4744981_4745617_4745728_4745945_4746110_4746245_4746266_4748800_4748938_4749075_4749261_4749375
ENSMUSG00000059866.14_0	chr5	-	2016	7	FSM	ENSMUSG00000059866.14	ENSMUST00000030991.14	2022	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34671301	34653430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34658801_34658865_34660880_34661172_34670962
ENSMUSG00000059866.14_1	chr5	-	1980	6	FSM	ENSMUSG00000059866.14	ENSMUST00000087737.10	1987	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGAGAGCTGGGCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	34671328	34653430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34654295_34656523_34656644_34656831_34657081_34658251_34658342_34660880_34661172_34670962
ENSMUSG00000059878.13_0	chr6	-	3182	2	FSM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTAGAAATTGAATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	116605960	116600981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_116604095_116605891
ENSMUSG00000059878.13_1	chr6	-	3115	1	ISM	ENSMUSG00000059878.13	ENSMUST00000079749.6	3187	2	1868	1	1570	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATTGAATGCCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	116604092	116600977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_116601000_116604100
ENSMUSG00000059878.13_2	chr6	-	2359	2	FSM	ENSMUSG00000059878.13	ENSMUST00000057540.6	2375	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTACTTCTGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	116605875	116601872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_116604095_116605738
ENSMUSG00000059883.17_0	chr15	+	2810	12	FSM	ENSMUSG00000059883.17	ENSMUST00000074936.10	2831	12	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGTAAAATGAAAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	94441534	94466177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_94441708_94445716_94445885_94449683_94449830_94451715_94451899_94452566_94452728_94454507_94454573_94456130_94456246_94456649_94456760_94459326_94459511_94460898_94460962_94464619_94464779_94464894
ENSMUSG00000059890.17_0	chr9	-	5827	20	FSM	ENSMUSG00000059890.17	ENST00000252108.8	5847	20	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTACCACCCTTGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	44871424	44834432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44836994_44837108_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864414_44871276
ENSMUSG00000059890.17_8	chr9	-	3402	20	FSM	ENSMUSG00000059890.17	ENSMUST00000117549.8	3415	20	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATACTGTGAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	44876891	44837151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44837274_44840959_44841118_44843639_44843788_44844595_44844777_44846624_44846800_44848930_44849045_44849146_44849248_44851258_44851447_44852451_44852585_44853863_44854169_44856102_44856224_44857481_44857816_44859323_44859516_44860079_44860283_44861030_44861191_44862078_44862232_44863287_44863401_44864239_44864471_44871276_44871438_44876782
ENSMUSG00000059895.14_11	chr15	+	3256	6	FSM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTGCTCTACTGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	73620226	73630615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_73620315_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUSG00000059895.14_12	chr15	+	1619	5	ISM	ENSMUSG00000059895.14	ENSMUST00000053232.8	3260	6	2765	1539	-602	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	73622987	73629076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUSG00000059895.14_13	chr15	+	1249	4	ISM	ENSMUSG00000059895.14	ENST00000520105.5	1324	5	26355	0	-610	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73622979	73628773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_73623877_73625604_73625698_73627142_73627274_73628645
ENSMUSG00000059895.14_16	chr15	+	442	3	FSM	ENSMUSG00000059895.14	ENST00000524028.1	456	3	14	0	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73623603	73628773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_73623877_73627910_73627952_73628645
ENSMUSG00000059895.14_2	chr15	+	1321	5	FSM	ENSMUSG00000059895.14	ENST00000520105.5	1324	5	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTGTACCTCATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	73596627	73628773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73628645
ENSMUSG00000059895.14_5	chr15	+	1680	6	FSM	ENSMUSG00000059895.14	ENSMUST00000230177.2	1680	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTGAAGAGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	73596646	73629076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_73596698_73622977_73623877_73625604_73625698_73627142_73627274_73627876_73627952_73628645
ENSMUSG00000059897.6_0	chr8	+	2991	4	FSM	ENSMUSG00000059897.6	ENSMUST00000212681.2	3001	4	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTAGCCATGACCCT	NA	NA	NA	NA	NA	NA	NA	NA	69661690	69683179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_69661812_69678994_69679122_69679323_69679382_69680494
ENSMUSG00000059900.15_0	chr6	-	382	6	FSM	ENSMUSG00000059900.15	ENST00000435218.6	385	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATGGTGCCGCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	115718538	115707398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955_115711045_115718501
ENSMUSG00000059900.15_1	chr6	-	340	5	ISM	ENSMUSG00000059900.15	ENST00000435218.6	385	6	7499	3	7499	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATGGTGCCGCACGTT	NA	NA	NA	NA	NA	NA	NA	NA	115711039	115707398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_115707460_115707967_115708043_115708145_115708218_115710614_115710663_115710955
ENSMUSG00000059901.13_0	chr10	-	5177	22	FSM	ENSMUSG00000059901.13	ENSMUST00000092486.11	5188	22	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTAATATTGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	61109215	61032899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_61034739_61036141_61036253_61036954_61037085_61038601_61038810_61040625_61040759_61041142_61041312_61043078_61043243_61047366_61047448_61048902_61049027_61049308_61049443_61054136_61054313_61057636_61057786_61058562_61058677_61060051_61060185_61061115_61061260_61062885_61062992_61065434_61065583_61066196_61066281_61081704_61081896_61085382_61085540_61106635_61107037_61108934
ENSMUSG00000059920.10_0	chr16	-	5505	3	FSM	ENSMUSG00000059920.10	ENSMUST00000076991.7	5522	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAAAATTGCCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	64591517	64582508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_64587357_64589286_64589526_64591099
ENSMUSG00000059921.16_1	chr3	+	3628	16	ISM	ENSMUSG00000059921.16	ENSMUST00000075282.10	3890	17	212411	0	212386	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGGTGGGCATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	141383745	141535230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_141383970_141420404_141420549_141439598_141439703_141463474_141463656_141474204_141474373_141476778_141476944_141492617_141492675_141494631_141494824_141495489_141495835_141497552_141497641_141507039_141507209_141509480_141509715_141522546_141522697_141523791_141523957_141533261_141533441_141534167
ENSMUSG00000059921.16_10	chr3	+	3881	17	NNC	ENSMUSG00000059921.16	novel	3890	17	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGGTGGGCATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	141171345	141535230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_141171599_141383745_141383970_141420404_141420549_141439598_141439703_141463474_141463656_141474204_141474373_141476778_141476944_141492617_141492675_141494631_141494824_141495489_141495835_141497552_141497641_141507039_141507209_141509480_141509715_141522546_141522697_141523791_141523957_141533261_141533441_141534167
ENSMUSG00000059921.16_2	chr3	+	9618	16	NNC	ENSMUSG00000059921.16	novel	9646	16	NA	NA	18	-12	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATAAGCAACAGAGACT	NA	NA	NA	NA	NA	NA	NA	NA	141170994	141540673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_141171599_141383745_141383970_141420404_141420549_141439598_141439703_141463474_141463656_141474204_141474373_141476778_141476944_141494631_141494824_141495489_141495835_141497552_141497641_141507039_141507209_141509480_141509715_141522546_141522697_141523791_141523957_141533261_141533441_141534167
ENSMUSG00000059923.14_0	chr11	-	2660	5	FSM	ENSMUSG00000059923.14	ENSMUST00000106497.8	2683	5	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAACTGTGTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	115590344	115534877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977
ENSMUSG00000059923.14_2	chr11	-	2699	6	FSM	ENSMUSG00000059923.14	ENSMUST00000021090.14	2709	6	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTGTGTCTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	115599416	115534873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115536781_115537535_115537705_115540596_115540720_115546183_115546282_115589977_115590183_115599219
ENSMUSG00000059923.14_3	chr11	-	653	4	FSM	ENSMUSG00000059923.14	ENST00000578961.5	675	4	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAAAGAAAGTGAAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	115590208	115536579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115536781_115540596_115540720_115546183_115546282_115589977
ENSMUSG00000059939.14_0	chr4	+	2522	10	FSM	ENSMUSG00000059939.14	ENSMUST00000072554.13	2528	10	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	156194438	156211716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156194481_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUSG00000059939.14_1	chr4	+	2639	10	FSM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	17	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	156194471	156211716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156194631_156198345_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUSG00000059939.14_5	chr4	+	2473	9	ISM	ENSMUSG00000059939.14	ENSMUST00000169550.8	2660	10	3898	4	3897	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGTTGAGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	156198352	156211716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_156198459_156201466_156201561_156203620_156203697_156206389_156206486_156206807_156206874_156207991_156208127_156208432_156208459_156208548_156208580_156209873
ENSMUSG00000059970.8_0	chr12	+	2498	2	FSM	ENSMUSG00000059970.8	ENSMUST00000080449.7	2524	2	17	9	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAAATTGCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	76450966	76453703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76451064_76451302
ENSMUSG00000059970.8_1	chr12	+	2507	1	FSM	ENSMUSG00000059970.8	ENSMUST00000219555.2	2526	1	14	5	14	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	309	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAAATTGCTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	76451196	76453703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76451200_76453700
ENSMUSG00000059975.16_0	chr7	-	3683	5	FSM	ENSMUSG00000059975.16	ENSMUST00000108205.9	3711	5	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAACAGTAGTGGATATT	NA	NA	NA	NA	NA	NA	NA	NA	29651298	29632223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29635469_29637024_29637121_29637366_29637494_29642915_29642971_29651138
ENSMUSG00000059981.13_0	chr7	-	4254	19	FSM	ENSMUSG00000059981.13	ENST00000279394.7	4274	19	14	6	14	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCACAGGATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126483432	126464854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_1	chr7	-	4683	19	FSM	ENSMUSG00000059981.13	ENSMUST00000071268.11	4720	19	32	5	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGACCACAGGATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	126483843	126464854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126466088_126466168_126466352_126467281_126467495_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_12	chr7	-	4067	17	FSM	ENSMUSG00000059981.13	ENST00000543033.5	4076	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCCCTAAGTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	126483526	126468892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126470241_126470573_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_7	chr7	-	4964	16	FSM	ENSMUSG00000059981.13	ENSMUST00000117394.2	4985	16	16	5	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACACCTTTGGCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	126483859	126468679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474106_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000059981.13_8	chr7	-	4938	16	FSM	ENSMUSG00000059981.13	ENST00000308893.9	4953	16	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGGAACTACACCTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	126483856	126468684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126470814_126471077_126471282_126471368_126471735_126473469_126473629_126473820_126474088_126474228_126474397_126475024_126475107_126475197_126475292_126477894_126477987_126478091_126478206_126478362_126478460_126478578_126478625_126479223_126479326_126479419_126479492_126479668_126479836_126483077
ENSMUSG00000060002.15_0	chr10	-	4827	9	FSM	ENSMUSG00000060002.15	ENSMUST00000117440.8	4863	9	15	21	15	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACGTAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	88339920	88305396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88308847_88311287_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUSG00000060002.15_3	chr10	-	3886	8	FSM	ENSMUSG00000060002.15	ENSMUST00000020253.15	3898	8	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATTCATATTTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88339821	88308679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_88311399_88312209_88312336_88312871_88313031_88316676_88316809_88318092_88318178_88324243_88324386_88325442_88325591_88339446
ENSMUSG00000060032.7_0	chr6	+	1812	1	FSM	ENSMUSG00000060032.7	ENSMUST00000074556.7	1831	1	10	9	10	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATCTGTGTCTTGACAG	NA	NA	NA	NA	NA	NA	NA	NA	136785251	136787063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_136785300_136787100
ENSMUSG00000060036.15_0	chr15	-	1338	10	FSM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	52274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACACTGGTTTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79967602	79961999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590_79966784_79967524
ENSMUSG00000060036.15_2	chr15	-	1261	9	ISM	ENSMUSG00000060036.15	ENSMUST00000081650.15	1351	10	823	8	823	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCACACTGGTTTTCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	79966784	79961999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79962096_79962187_79962308_79962531_79962628_79962907_79963010_79963890_79964052_79964566_79964754_79965096_79965233_79965815_79965985_79966590
ENSMUSG00000060038.15_0	chr8	+	1318	9	FSM	ENSMUSG00000060038.15	ENSMUST00000078665.13	1333	9	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTCTGCATCCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85798395	85801786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801021_85801126_85801362_85801489_85801562
ENSMUSG00000060038.15_2	chr8	+	1023	8	FSM	ENSMUSG00000060038.15	ENST00000351660.9	1042	8	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATAAATGGCCCTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	85798518	85801755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85798683_85799080_85799246_85799923_85800046_85800131_85800229_85800309_85800397_85800840_85800947_85801399_85801489_85801562
ENSMUSG00000060063.10_0	chr5	+	1238	5	FSM	ENSMUSG00000060063.10	ENSMUST00000071130.5	1251	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTCTTCAAGAGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	149201583	149224957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149201993_149209190_149209291_149215985_149216057_149222153_149222236_149224381
ENSMUSG00000060073.10_0	chr12	+	2828	11	FSM	ENSMUSG00000060073.10	ENSMUST00000160027.8	2846	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	6236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACTACAATAAGCTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	71021403	71043112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_71021542_71025506_71025590_71030092_71030217_71031266_71031369_71031445_71031520_71033636_71033710_71035197_71035264_71037258_71037306_71039786_71039855_71040279_71040345_71041124
ENSMUSG00000060090.17_0	chrX	+	4402	5	FSM	ENSMUSG00000060090.17	ENSMUST00000033372.13	4417	5	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTCTTGATGTCTATAC	NA	NA	NA	NA	NA	NA	NA	NA	20230732	20267090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20231068_20243119_20243786_20247943_20248059_20263459_20263546_20263890
ENSMUSG00000060098.12_0	chr8	+	3450	18	FSM	ENSMUSG00000060098.12	ENSMUST00000071592.12	3472	18	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTAAAAAAGTTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	106937575	106979412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106937715_106939007_106939204_106943875_106943913_106946551_106946702_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970482_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060098.12_8	chr8	+	1975	16	FSM	ENSMUSG00000060098.12	ENST00000449359.7	1992	16	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGCCAGCAGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	106939082	106978297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106939204_106943875_106943913_106953842_106953952_106961479_106961593_106963425_106963668_106963853_106964035_106967817_106967946_106968742_106968879_106969926_106970011_106970433_106970486_106971288_106971379_106973694_106973857_106974980_106975056_106976939_106977101_106977828_106977926_106978110
ENSMUSG00000060121.16_0	chr12	+	1566	10	FSM	ENSMUSG00000060121.16	ENSMUST00000021379.8	1588	10	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCAATAGTTTTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	59060192	59075248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59060400_59060755_59060841_59063651_59063742_59063953_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_13	chr12	+	992	9	FSM	ENSMUSG00000060121.16	ENST00000250379.13	1003	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTGGGGGGTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	59060269	59074794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59060400_59060755_59060841_59063651_59063746_59063955_59064014_59064797_59064912_59068453_59068523_59071788_59071900_59073640_59073700_59074522
ENSMUSG00000060121.16_6	chr12	+	749	9	FSM	ENSMUSG00000060121.16	ENST00000396249.7	759	9	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCGCTTACCTCCTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	59060265	59074561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_59060400_59060755_59060841_59063651_59063746_59063955_59064014_59064797_59064912_59067174_59067220_59068453_59068523_59071788_59071900_59074522
ENSMUSG00000060126.15_0	chr14	+	1150	6	FSM	ENSMUSG00000060126.15	ENSMUST00000110894.9	1169	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTACAAGACTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	76082542	76085846	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76082897_76083056_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060126.15_11	chr14	+	971	5	FSM	ENSMUSG00000060126.15	ENSMUST00000142061.3	996	5	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCACAAAAAGACCAAC	NA	NA	NA	NA	NA	NA	NA	NA	76082751	76085950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76082897_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060126.15_14	chr14	+	793	5	FSM	ENSMUSG00000060126.15	ENST00000379055.5	823	5	25	5	-20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACAAATGGGACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	76082820	76085607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76083131_76083642_76083834_76084133_76084240_76084683_76084801_76085538
ENSMUSG00000060131.12_0	chr2	-	3537	25	ISM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	17971	1	17971	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGGCAGCTCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	126304636	126164679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234766_126239507_126239717_126245110_126245308_126247227_126247317_126256206_126256366_126266067_126266151_126269276_126269348_126275792_126275866_126300162_126300225_126301555_126301655_126304527
ENSMUSG00000060131.12_1	chr2	-	3601	26	FSM	ENSMUSG00000060131.12	ENST00000284509.11	3603	26	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGGCAGCTCAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	126322606	126164679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126165012_126167194_126167326_126172781_126172921_126179296_126179543_126184874_126184959_126199935_126200160_126200687_126200872_126203675_126203824_126214084_126214191_126216403_126216516_126217585_126217751_126220632_126220749_126225580_126225770_126231160_126231327_126234721_126234766_126239507_126239717_126245110_126245308_126247227_126247317_126256206_126256366_126266067_126266151_126269276_126269348_126275792_126275866_126300162_126300225_126301555_126301655_126304527_126304642_126322547
ENSMUSG00000060143.8_0	chr14	+	351	1	FSM	ENSMUSG00000060143.8	ENSMUST00000073238.7	384	1	26	7	26	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCTGAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	105919287	105919638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_105919300_105919600
ENSMUSG00000060147.16_16	chr13	-	1495	8	FSM	ENSMUSG00000060147.16	ENSMUST00000017188.14	1504	8	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACCTTCAGAACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34119976	34101915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119609_34119778_34119904
ENSMUSG00000060147.16_3	chr13	-	1535	7	FSM	ENSMUSG00000060147.16	ENSMUST00000043552.17	1547	7	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTCTGTCTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34120173	34101904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119904
ENSMUSG00000060147.16_4	chr13	-	1492	8	FSM	ENSMUSG00000060147.16	ENSMUST00000076532.14	1504	8	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGTCTGTCTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	34186769	34101904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34180225_34180335_34186652
ENSMUSG00000060147.16_5	chr13	-	1642	8	FSM	ENSMUSG00000060147.16	ENSMUST00000167163.8	1654	8	7	5	7	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAACTGTCTGTCTGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	34120059	34101905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_34102426_34102723_34102880_34106908_34107052_34109294_34109413_34114007_34114161_34115454_34115630_34119555_34119778_34119904
ENSMUSG00000060149.8_0	chr17	+	1577	4	FSM	ENSMUSG00000060149.8	ENSMUST00000232328.2	1598	4	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATACAAGAAGACAT	NA	NA	NA	NA	NA	NA	NA	NA	17171819	17193924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17171971_17191161_17191289_17191432_17191494_17192686
ENSMUSG00000060152.15_0	chr5	+	1021	6	FSM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTCCCCGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115373894	115379046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115373944_115375882_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ENSMUSG00000060152.15_1	chr5	+	958	5	ISM	ENSMUSG00000060152.15	ENSMUST00000081497.13	1025	6	2002	4	2002	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTGCTCCCCGTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115375896	115379046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_115376129_115376193_115376337_115378220_115378371_115378531_115378616_115378697
ENSMUSG00000060166.7_0	chr16	-	4856	11	FSM	ENSMUSG00000060166.7	ENSMUST00000076957.7	4868	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCACGGCACTGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	18052995	18038623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18041242_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ENSMUSG00000060166.7_1	chr16	-	2748	11	FSM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGTGCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	18052863	18038926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18039569_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498_18046621_18052770
ENSMUSG00000060166.7_2	chr16	-	2655	10	ISM	ENSMUSG00000060166.7	ENST00000405930.3	2763	11	6254	4	6254	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGCTTGGTGCACCATG	NA	NA	NA	NA	NA	NA	NA	NA	18046620	18038926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_18039569_18042081_18043080_18044322_18044433_18044509_18044631_18044916_18045053_18045218_18045311_18045639_18045743_18045922_18046096_18046177_18046336_18046498
ENSMUSG00000060176.5_0	chr13	-	3445	14	FSM	ENSMUSG00000060176.5	ENST00000334204.6	3466	14	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1449	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAGAGACTGAAAGACCC	NA	NA	NA	NA	NA	NA	NA	NA	58502752	58438899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_58439004_58440857_58441057_58442697_58442905_58451176_58451393_58467932_58468131_58471641_58471848_58473756_58473913_58475737_58475842_58476669_58476840_58478732_58478940_58485356_58485501_58491679_58492639_58493442_58493644_58502378
ENSMUSG00000060177.7_0	chr7	+	834	5	FSM	ENSMUSG00000060177.7	ENSMUST00000077528.7	855	5	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACATATTAGTTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	43762107	43766336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43762172_43764119_43764280_43765255_43765537_43765632_43765770_43766144
ENSMUSG00000060177.7_2	chr7	+	761	4	ISM	ENSMUSG00000060177.7	ENSMUST00000077528.7	855	5	2022	20	2022	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATACCATGCAACATA	NA	NA	NA	NA	NA	NA	NA	NA	43764118	43766326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_43764280_43765255_43765537_43765632_43765770_43766144
ENSMUSG00000060180.13_1	chr11	+	5983	41	FSM	ENSMUSG00000060180.13	ENSMUST00000180845.8	5991	41	0	8	0	-8	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCAGCATCCATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67212605	67262404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67212633_67213816_67213868_67217916_67218133_67219775_67219920_67220000_67220158_67221691_67221720_67221809_67221922_67223326_67223420_67225374_67225439_67225528_67225628_67225724_67225829_67228466_67228606_67231148_67231268_67231984_67232135_67232240_67232412_67233066_67233377_67235630_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ENSMUSG00000060180.13_3	chr11	+	5950	40	ISM	ENSMUSG00000060180.13	ENSMUST00000180845.8	5991	41	1217	8	1217	-8	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCAGCATCCATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67213822	67262404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_67213868_67217916_67218133_67219775_67219920_67220000_67220158_67221691_67221720_67221809_67221922_67223326_67223420_67225374_67225439_67225528_67225628_67225724_67225829_67228466_67228606_67231148_67231268_67231984_67232135_67232240_67232412_67233066_67233377_67235630_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ENSMUSG00000060180.13_6	chr11	+	5906	39	FSM	ENSMUSG00000060180.13	ENSMUST00000081911.12	5817	39	-13	-76	-13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTCAGCATCCATGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	67217915	67262404	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_67218133_67219775_67219920_67220000_67220158_67221691_67221720_67221809_67221922_67223326_67223420_67225374_67225439_67225528_67225628_67225724_67225829_67228466_67228606_67231148_67231268_67231984_67232135_67232240_67232412_67233066_67233377_67235630_67235705_67235806_67235895_67238714_67238833_67239625_67239750_67240395_67240533_67241059_67241316_67242779_67243023_67244398_67244576_67245472_67245619_67245727_67245819_67246628_67247019_67248933_67249061_67249146_67249266_67251106_67251304_67252074_67252259_67253230_67253397_67254012_67254138_67255287_67255597_67255677_67255882_67257978_67258105_67258382_67258554_67259930_67260036_67260134_67260231_67261745_67261881_67262313
ENSMUSG00000060181.7_0	chr10	-	3477	5	FSM	ENSMUSG00000060181.7	ENSMUST00000079041.7	3489	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAACCATACAGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	117582267	117569592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117572139_117576416_117576500_117576657_117576817_117580789_117580901_117581689
ENSMUSG00000060206.12_0	chr4	+	10437	13	FSM	ENSMUSG00000060206.12	ENSMUST00000098070.10	10465	13	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATTTATGTGCATCT	NA	NA	NA	NA	NA	NA	NA	NA	54947996	55083556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_54948233_55007532_55007783_55008255_55013850_55014682_55014848_55016996_55017101_55020088_55020208_55023414_55023607_55050185_55050454_55051190_55051328_55060013_55060238_55072972_55073106_55079263_55079388_55080665
ENSMUSG00000060216.16_1	chr11	+	1839	15	FSM	ENSMUSG00000060216.16	ENSMUST00000102564.11	1848	15	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGTGCTATGCCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	70323484	70331617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70323580_70326367_70326399_70326988_70327050_70327156_70327202_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060216.16_10	chr11	+	1181	13	FSM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGGGGCGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70326365	70331097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70326399_70326988_70327050_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060216.16_18	chr11	+	1146	12	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	625	1	625	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGGGGCGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70326990	70331097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70327050_70327386_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060216.16_29	chr11	+	1088	11	ISM	ENSMUSG00000060216.16	ENST00000381488.10	1182	13	1020	1	1020	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTAGGGGCGGGCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	70327385	70331097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_70327584_70327694_70327755_70328135_70328204_70328396_70328536_70328769_70328855_70329144_70329218_70329473_70329612_70330297_70330382_70330487_70330568_70330676_70330732_70330989
ENSMUSG00000060227.16_0	chr2	+	4018	9	FSM	ENSMUSG00000060227.16	ENSMUST00000110586.10	4032	9	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121697456	121766678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121763958
ENSMUSG00000060227.16_2	chr2	+	4183	10	FSM	ENSMUSG00000060227.16	ENSMUST00000078752.10	4215	10	9	23	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121697459	121766678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121698013_121729278_121729334_121731662_121731766_121733542_121733634_121736410_121736553_121737178_121737260_121741279_121741379_121742351_121742523_121756041_121756210_121763958
ENSMUSG00000060244.2_0	chr1	+	1256	1	FSM	ENSMUSG00000060244.2	ENSMUST00000081527.2	1273	1	4	13	4	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAAGAATTGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	171331049	171332305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_171331000_171332300
ENSMUSG00000060260.14_0	chr7	+	3047	3	FSM	ENSMUSG00000060260.14	ENSMUST00000093993.5	3057	3	3	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCACACCCTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	138828400	138847884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138828560_138834685_138836077_138846387
ENSMUSG00000060260.14_3	chr7	+	2528	3	FSM	ENSMUSG00000060260.14	ENSMUST00000172136.9	2543	3	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGACCAAAAAGAAAACAGAA	NA	NA	NA	NA	NA	NA	NA	NA	138828412	138847072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138828560_138834685_138836382_138846387
ENSMUSG00000060261.17_0	chr5	-	4437	35	FSM	ENSMUSG00000060261.17	ENSMUST00000059042.15	4455	35	9	9	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134343605	134266696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134305225_134305283_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUSG00000060261.17_1	chr5	-	4361	34	FSM	ENSMUSG00000060261.17	ENSMUST00000111261.12	4381	34	14	6	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134343586	134266696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272442_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134301377_134301441_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUSG00000060261.17_2	chr5	-	4280	33	FSM	ENSMUSG00000060261.17	ENSMUST00000173341.9	4302	33	18	4	-9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGCAAACTCATTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	134343556	134266696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134267747_134268350_134268426_134269096_134269139_134269726_134269769_134270984_134271014_134271457_134271642_134271761_134271846_134272360_134272454_134272754_134272811_134273547_134273732_134273970_134274037_134275363_134275466_134275674_134275750_134276072_134276132_134278695_134278880_134280719_134280792_134283866_134283926_134284678_134284863_134289420_134289493_134290696_134290756_134292438_134292623_134294590_134294657_134295396_134295511_134303392_134303450_134308290_134308369_134311640_134311685_134312047_134312103_134315548_134315578_134315713_134315898_134318140_134318276_134322600_134322740_134324363_134324468_134343236
ENSMUSG00000060261.17_23	chr5	-	359	4	ISM	ENSMUSG00000060261.17	ENST00000441415.1	419	5	798	2	798	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGAGGTAAGATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134294647	134284686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_134284858_134289420_134289493_134290696_134290756_134294590
ENSMUSG00000060261.17_24	chr5	-	417	5	FSM	ENSMUSG00000060261.17	ENST00000441415.1	419	5	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAGAGGTAAGATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134295445	134284686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134284858_134289420_134289493_134290696_134290756_134294590_134294657_134295396
ENSMUSG00000060275.15_0	chr18	-	2571	11	FSM	ENSMUSG00000060275.15	ENST00000358522.7	2579	11	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGCCCCCCGCCTCGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	36330206	36150968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_36151736_36154110_36154339_36154905_36155034_36155358_36155483_36157358_36157462_36160445_36160470_36164935_36164995_36171283_36171405_36178910_36179030_36185832_36186005_36329480
ENSMUSG00000060279.15_0	chr7	-	3346	23	FSM	ENSMUSG00000060279.15	ENSMUST00000107857.11	3301	23	-42	-3	22	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACCCCAGCTATTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	44578892	44549805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44550240_44550410_44550546_44550660_44550731_44550807_44550925_44551014_44551139_44552172_44552263_44552397_44552481_44552567_44552625_44553164_44553326_44553412_44553581_44553660_44553893_44554076_44554175_44555108_44555292_44555494_44555633_44555734_44555904_44556257_44556409_44557147_44557257_44558643_44558746_44559122_44559253_44565264_44565459_44565586_44565730_44565825_44565895_44578703
ENSMUSG00000060284.8_0	chr15	-	2844	2	FSM	ENSMUSG00000060284.8	ENSMUST00000229464.2	2873	2	29	0	29	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCCTTTCCTGAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	102275374	102265215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102267838_102275152
ENSMUSG00000060288.14_0	chr4	-	748	10	FSM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGGGTTCTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119177678	119157212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUSG00000060288.14_1	chr4	-	788	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106318.8	800	10	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGGGTTCTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119177737	119157212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119157381_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUSG00000060288.14_2	chr4	-	671	9	ISM	ENSMUSG00000060288.14	ENSMUST00000056458.14	757	10	255	6	255	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCATGGGTTCTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	119177426	119157212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_119157400_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365
ENSMUSG00000060288.14_4	chr4	-	1280	10	FSM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATACTACCTTGTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	119177676	119164359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365_119177431_119177605
ENSMUSG00000060288.14_5	chr4	-	1208	9	ISM	ENSMUSG00000060288.14	ENSMUST00000106321.9	1288	10	252	3	252	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATACTACCTTGTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	119177429	119164359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_119165081_119167955_119168045_119168728_119168770_119169415_119169504_119174224_119174318_119175740_119175784_119176716_119176762_119177026_119177051_119177365
ENSMUSG00000060301.7_0	chr10	-	4206	6	FSM	ENSMUSG00000060301.7	ENSMUST00000039271.7	4229	6	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGCTGTGTCAGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	78933418	78900214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78903886_78904467_78904563_78924120_78924214_78928245_78928339_78930264_78930392_78933291
ENSMUSG00000060336.7_0	chr2	+	2766	4	FSM	ENSMUSG00000060336.7	ENSMUST00000073782.4	2797	4	0	31	0	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGGAAAAGAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	150059992	150082614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150060119_150078611_150078739_150078948_150079010_150080162
ENSMUSG00000060373.16_0	chr14	-	2840	9	FSM	ENSMUSG00000060373.16	ENSMUST00000111610.12	2847	9	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTTGGTATATACATCA	NA	NA	NA	NA	NA	NA	NA	NA	52341478	52310833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_13	chr14	-	2485	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228198.2	2498	9	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTGCAAATATAAAAATGGC	NA	NA	NA	NA	NA	NA	NA	NA	52341448	52311137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_18	chr14	-	1732	9	FSM	ENSMUSG00000060373.16	ENST00000554969.5	1750	9	11	7	11	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGACAATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52335991	52311902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52335837
ENSMUSG00000060373.16_19	chr14	-	1423	6	FSM	ENSMUSG00000060373.16	ENST00000556142.5	1438	6	7	8	7	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGAAAGACAATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52321842	52311903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571
ENSMUSG00000060373.16_25	chr14	-	1675	9	FSM	ENSMUSG00000060373.16	ENSMUST00000228748.2	1691	9	8	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGGAATTTGAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	52341456	52311916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_30	chr14	-	1664	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227458.2	1683	9	9	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACCAGGAATTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	52341451	52311919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312870_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060373.16_40	chr14	-	999	6	ISM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	13661	2	12	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATCTCTTGTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	52321837	52312243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696
ENSMUSG00000060373.16_41	chr14	-	1037	7	FSM	ENSMUSG00000060373.16	ENST00000556628.5	1039	7	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAATCTCTTGTTATGC	NA	NA	NA	NA	NA	NA	NA	NA	52335498	52312243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52321696_52321849_52335471
ENSMUSG00000060373.16_44	chr14	-	1059	7	FSM	ENSMUSG00000060373.16	ENST00000555883.5	1075	7	11	5	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	52321838	52312256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313164_52314968_52315021_52318716_52318765_52319284_52319361_52321571
ENSMUSG00000060373.16_47	chr14	-	1294	8	FSM	ENSMUSG00000060373.16	ENSMUST00000227536.2	1301	8	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACTGTCTCCAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	52341420	52312256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52341345
ENSMUSG00000060373.16_58	chr14	-	1412	10	FSM	ENSMUSG00000060373.16	ENST00000420743.6	1430	10	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTTGTCCCGCCTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	52335990	52312428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314859_52315021_52318716_52318765_52319245_52319361_52321571_52321849_52334778_52334947_52335471_52335498_52335837
ENSMUSG00000060373.16_66	chr14	-	840	7	FSM	ENSMUSG00000060373.16	ENST00000426952.2	853	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGAGGATGACTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	52321802	52312557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312873_52313069_52313184_52314870_52315021_52318716_52318765_52319284_52319361_52321571
ENSMUSG00000060373.16_8	chr14	-	2600	9	FSM	ENSMUSG00000060373.16	ENSMUST00000227242.2	2617	9	11	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGCTGTTAGAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	52341451	52311007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_52312618_52312711_52312894_52313069_52313184_52314859_52315021_52318716_52318765_52319284_52319361_52321571_52321849_52335471_52335498_52341345
ENSMUSG00000060376.8_0	chr7	-	1891	9	FSM	ENSMUSG00000060376.8	ENSMUST00000071329.8	1899	9	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTTCCTTCGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25358399	25329371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25329859_25330424_25330597_25330766_25330909_25331062_25331270_25332664_25332827_25337586_25337696_25340881_25340969_25341068_25341252_25358057
ENSMUSG00000060377.5_0	chr14	-	416	1	FSM	ENSMUSG00000060377.5	ENSMUST00000081987.5	449	1	14	19	14	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATTACCTGAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	99231740	99231324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_99231300_99231700
ENSMUSG00000060380.4_1	chr9	+	1357	7	FSM	ENSMUSG00000060380.4	ENSMUST00000217463.2	1370	7	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTTTAAAGAACTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	44379773	44393464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44379812_44379913_44380073_44381342_44381471_44382155_44382249_44384656_44384797_44388791_44388968_44392841
ENSMUSG00000060380.4_3	chr9	+	1299	6	ISM	ENSMUSG00000060380.4	ENSMUST00000217463.2	1370	7	167	6	167	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACTGCTTAGAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	44379940	44393471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44380073_44381342_44381471_44382155_44382249_44384656_44384797_44388791_44388968_44392841
ENSMUSG00000060397.7_0	chr7	+	3815	4	FSM	ENSMUSG00000060397.7	ENSMUST00000144578.2	3834	4	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTTATACAAGATCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	12615109	12627336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_12615288_12618569_12618697_12618949_12619046_12623922
ENSMUSG00000060402.9_0	chr7	-	2415	4	FSM	ENSMUSG00000060402.9	ENST00000262622.4	2429	4	8	6	8	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTGGTGTCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	34453229	34374189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34452569
ENSMUSG00000060402.9_1	chr7	-	2161	5	FSM	ENSMUSG00000060402.9	ENST00000434302.5	2176	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAGTGGTGTCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	34512099	34374189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34375691_34376059_34376098_34447486_34447703_34473250_34473328_34511770
ENSMUSG00000060427.16_0	chr8	-	2244	5	FSM	ENSMUSG00000060427.16	ENSMUST00000121886.8	2259	5	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTACCACTTATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	70078191	70063514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70065107_70066044_70066106_70066398_70066526_70071964_70072323_70078085
ENSMUSG00000060429.13_0	chr15	-	4899	7	FSM	ENSMUSG00000060429.13	ENSMUST00000039769.13	4919	7	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTAGGCTTATAATTT	NA	NA	NA	NA	NA	NA	NA	NA	55770327	55499785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_55502824_55506050_55506242_55511252_55511450_55539699_55539840_55612583_55612792_55655429_55655647_55769419
ENSMUSG00000060450.15_0	chr18	+	2871	8	FSM	ENSMUSG00000060450.15	ENSMUST00000170811.8	2886	8	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38429697	38450895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_2	chr18	+	3024	9	FSM	ENSMUSG00000060450.15	ENSMUST00000072376.13	3040	9	9	7	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAGTAGACACGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	38429696	38450895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38429852_38432806_38432980_38433481_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447857_38449577
ENSMUSG00000060450.15_21	chr18	+	2464	7	FSM	ENSMUSG00000060450.15	ENST00000347642.7	2480	7	14	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTACTTGGTGGATGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	38433503	38450722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38433644_38434708_38434861_38440917_38441449_38442537_38442767_38446264_38446438_38447725_38447861_38449618
ENSMUSG00000060450.15_26	chr18	+	1034	4	FSM	ENSMUSG00000060450.15	ENST00000427378.1	1052	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACCCATACAGGTAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	38433505	38446425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_38433644_38440942_38441449_38442537_38442767_38446264
ENSMUSG00000060459.15_0	chr16	-	2286	10	FSM	ENSMUSG00000060459.15	ENSMUST00000100046.9	2294	10	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAATCCCTCTGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	22847849	22806101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_22807076_22815772_22815860_22815960_22816069_22818563_22818737_22819280_22819366_22822681_22822790_22830746_22830920_22843589_22843672_22845797_22845909_22847464
ENSMUSG00000060461.6_0	chr9	-	561	3	FSM	ENSMUSG00000060461.6	ENSMUST00000071991.6	619	3	46	12	46	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGATTAAAATGTGCGTC	NA	NA	NA	NA	NA	NA	NA	NA	78275413	78274345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78274577_78275002_78275186_78275266
ENSMUSG00000060470.8_0	chr8	+	2421	12	FSM	ENSMUSG00000060470.8	ENSMUST00000051259.10	2439	12	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	860	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAGCAAATGGATGTATC	NA	NA	NA	NA	NA	NA	NA	NA	95744327	95771868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95744449_95747560_95747712_95759985_95760122_95761577_95761725_95762437_95762573_95763068_95763109_95763227_95763320_95763453_95763567_95766036_95766318_95766477_95766572_95766887_95767163_95771032
ENSMUSG00000060475.14_0	chr17	-	2044	8	FSM	ENSMUSG00000060475.14	ENSMUST00000159551.8	2060	8	9	7	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGACTCTTGTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	13211375	13185689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUSG00000060475.14_1	chr17	-	2034	8	FSM	ENSMUSG00000060475.14	ENSMUST00000007007.14	2051	8	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACGACTCTTGTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	13211136	13185692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13186939_13188291_13188447_13194182_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ENSMUSG00000060475.14_2	chr17	-	3166	6	FSM	ENSMUSG00000060475.14	ENSMUST00000159986.8	3187	6	8	13	8	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACTAAGAAATGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	13211071	13191584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13210963
ENSMUSG00000060475.14_4	chr17	-	2419	6	FSM	ENSMUSG00000060475.14	ENSMUST00000160781.8	2442	6	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGACAAAATTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	13211416	13192444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13194362_13199708_13199837_13200636_13200696_13202343_13202400_13204802_13204841_13211195
ENSMUSG00000060477.15_0	chr6	+	3184	13	FSM	ENSMUSG00000060477.15	ENSMUST00000059286.14	3196	13	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATTTTGTGTCTGGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	113615435	113671983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113615603_113624599_113624783_113642663_113642808_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060477.15_3	chr6	+	2962	12	FSM	ENSMUSG00000060477.15	ENSMUST00000089022.9	2974	12	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAGCAGCTGTCTTATA	NA	NA	NA	NA	NA	NA	NA	NA	113615496	113671966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113615603_113624599_113624783_113647159_113647255_113649699_113649901_113649983_113650049_113652591_113652707_113653547_113653658_113655607_113655804_113659693_113659757_113663718_113663920_113667743_113668033_113670628
ENSMUSG00000060510.15_0	chr9	-	6265	9	FSM	ENSMUSG00000060510.15	ENSMUST00000174462.8	6283	9	4	14	4	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTAAAATAAAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	20432709	20406377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432639
ENSMUSG00000060510.15_1	chr9	-	2205	8	ISM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	294	2	294	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTATCTGTTGCCACCTT	NA	NA	NA	NA	NA	NA	NA	NA	20432410	20410362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315
ENSMUSG00000060510.15_2	chr9	-	2260	9	FSM	ENSMUSG00000060510.15	ENSMUST00000068296.8	2266	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGCCTATCTGTTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	20432704	20410366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20411774_20412169_20412250_20413336_20413418_20416347_20416475_20417272_20417362_20418023_20418179_20419314_20419482_20432315_20432416_20432650
ENSMUSG00000060519.12_0	chr1	-	3265	6	FSM	ENSMUSG00000060519.12	ENSMUST00000079625.11	3285	6	13	7	-8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	969	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAAGTGCTGATGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	156501913	156481193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156483514_156484041_156484167_156494168_156494348_156496940_156497207_156501099_156501217_156501655
ENSMUSG00000060534.17_0	chr18	-	3200	23	FSM	ENSMUSG00000060534.17	ENST00000581580.5	3212	23	7	5	7	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTAAGAAGCTTTGATCA	NA	NA	NA	NA	NA	NA	NA	NA	71815383	71395880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_71396021_71432401_71432615_71439044_71439205_71454101_71454219_71460469_71460697_71469009_71469173_71475782_71475849_71496040_71496074_71500115_71500311_71503721_71503830_71507543_71507683_71511725_71511899_71517198_71517295_71553295_71553491_71579407_71579519_71589941_71590084_71675315_71675366_71680373_71680513_71682073_71682223_71708141_71708297_71720941_71721099_71812531_71812653_71815232
ENSMUSG00000060538.15_0	chr7	-	882	5	FSM	ENSMUSG00000060538.15	ENSMUST00000120007.8	1087	5	199	6	199	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTATTGTGTAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126496397	126485395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197
ENSMUSG00000060538.15_1	chr7	-	911	6	FSM	ENSMUSG00000060538.15	ENSMUST00000121532.8	915	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTATTGTGTAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126497425	126485395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497395
ENSMUSG00000060538.15_2	chr7	-	937	6	FSM	ENSMUSG00000060538.15	ENSMUST00000032926.12	941	6	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTATTGTGTAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126497448	126485395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496400_126497395
ENSMUSG00000060538.15_5	chr7	-	1093	7	FSM	ENSMUSG00000060538.15	ENSMUST00000119781.8	1118	7	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTATTGTGTAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	126522066	126485395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126485488_126488062_126488233_126490774_126491005_126495920_126496111_126496197_126496397_126497968_126498096_126521981
ENSMUSG00000060550.17_0	chr17	+	1482	7	FSM	ENSMUSG00000060550.17	ENSMUST00000071951.14	1497	7	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAATAAATAAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	35658145	35662710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35658261_35658427_35658698_35658884_35659161_35661242_35661528_35661653_35661771_35661942_35661976_35662324
ENSMUSG00000060550.17_1	chr17	+	1523	7	NIC	ENSMUSG00000060550.17	novel	1523	8	NA	NA	0	-4	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATCTGTGTCACTGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	35658130	35662745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_35658261_35658427_35658698_35658884_35659161_35661242_35661519_35661653_35661771_35661942_35661976_35662324
ENSMUSG00000060572.18_0	chr4	+	1066	9	FSM	ENSMUSG00000060572.18	ENSMUST00000071977.9	1073	9	1	6	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTCACTTTTGCGTCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	140737955	140743289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140738033_140740136_140740213_140741083_140741171_140741366_140741394_140741499_140741581_140741705_140741760_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060572.18_1	chr4	+	990	8	ISM	ENSMUSG00000060572.18	ENSMUST00000071977.9	1073	9	2180	7	-945	4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGGTCACTTTTGCGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	140740134	140743288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_140740213_140741083_140741171_140741366_140741394_140741499_140741581_140741705_140741760_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060572.18_2	chr4	+	879	6	FSM	ENSMUSG00000060572.18	ENST00000375535.4	890	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGACCACGGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	140741084	140743278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140741171_140741366_140741394_140741499_140741613_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060572.18_4	chr4	+	762	4	FSM	ENSMUSG00000060572.18	ENST00000375534.7	774	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAGACCACGGTCACTT	NA	NA	NA	NA	NA	NA	NA	NA	140741503	140743278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_140741613_140742293_140742382_140742525_140742600_140742787
ENSMUSG00000060586.12_0	chr17	+	646	4	FSM	ENSMUSG00000060586.12	ENST00000437650.2	664	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGGTAACACCCATTGTC	NA	NA	NA	NA	NA	NA	NA	NA	34528601	34534548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34528835_34533143_34533430_34534019_34534128_34534529
ENSMUSG00000060586.12_1	chr17	+	620	3	ISM	ENSMUSG00000060586.12	ENST00000437650.2	664	4	20	426	20	-426	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGAGCCTGGTGGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	34528609	34534128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_34528835_34533143_34533430_34534019
ENSMUSG00000060591.10_0	chr7	-	636	2	FSM	ENSMUSG00000060591.10	ENSMUST00000081649.10	655	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	4376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGGCTGTGACTCACT	NA	NA	NA	NA	NA	NA	NA	NA	140535888	140534756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_140535087_140535582
ENSMUSG00000060594.7_0	chr9	-	1496	9	FSM	ENSMUSG00000060594.7	ENSMUST00000217212.2	1500	9	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGCAAATCCGTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	50988364	50965941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50966396_50968793_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUSG00000060594.7_5	chr9	-	1763	8	FSM	ENSMUSG00000060594.7	ENSMUST00000098782.4	1786	8	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGTTAGTCAGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	50988380	50968088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_50968957_50970756_50970857_50973482_50973567_50974536_50974573_50979338_50979497_50985147_50985446_50987621_50987646_50988185
ENSMUSG00000060600.16_35	chr11	+	1555	12	FSM	ENSMUSG00000060600.16	ENSMUST00000108548.8	1564	12	1	8	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACCATGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70548030	70553331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70548094_70548585_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060600.16_5	chr11	+	1445	12	FSM	ENSMUSG00000060600.16	ENSMUST00000072841.12	1454	12	1	8	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACCATGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70548028	70553331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70548094_70548697_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060600.16_72	chr11	+	1383	11	FSM	ENSMUSG00000060600.16	ENSMUST00000170716.8	1461	11	73	5	73	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	4863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACCATGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	70548694	70553331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_70548785_70548990_70549087_70549214_70549274_70549420_70549491_70549853_70549988_70551485_70551709_70551822_70552021_70552214_70552417_70552787_70552897_70553039_70553099_70553188
ENSMUSG00000060601.14_0	chr7	-	1981	10	FSM	ENSMUSG00000060601.14	ENSMUST00000073488.12	1999	10	10	8	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCATTCCTGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44203363	44199047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUSG00000060601.14_20	chr7	-	1911	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107910.8	1948	10	16	21	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAATAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44203331	44199079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202182_44203002_44203133_44203232
ENSMUSG00000060601.14_23	chr7	-	1937	10	FSM	ENSMUSG00000060601.14	ENSMUST00000167197.8	1944	10	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAATAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44203344	44199079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201670_44201930_44202045_44202120_44202182_44203002_44203133_44203228
ENSMUSG00000060601.14_4	chr7	-	1971	10	FSM	ENSMUSG00000060601.14	ENSMUST00000107911.8	1988	10	10	7	10	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCCATTCCTGAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	44203362	44199047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44199556_44199723_44199933_44200168_44200269_44200741_44200922_44201023_44201284_44201378_44201661_44201930_44202045_44202120_44202179_44203002_44203133_44203232
ENSMUSG00000060621.7_0	chr7	+	3255	4	FSM	ENSMUSG00000060621.7	ENST00000317951.6	3263	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGGCAGCAAAGACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	19253732	19322809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19254177_19255858_19255991_19256895_19259544_19322778
ENSMUSG00000060621.7_2	chr7	+	3219	3	ISM	ENSMUSG00000060621.7	ENSMUST00000078908.5	2753	4	1083	-569	14	563	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCGTGTGTGGCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	19253738	19259544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_19254177_19255858_19255991_19256895
ENSMUSG00000060636.15_0	chr16	+	488	5	FSM	ENSMUSG00000060636.15	ENSMUST00000078804.12	491	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	5717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTTTCTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32876822	32880556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32876881_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_10	chr16	+	495	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115078.8	500	5	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTCACATCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32876900	32880534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32876988_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_16	chr16	+	427	4	FSM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	121	-30	121	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTTTCTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32877508	32880556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_19	chr16	+	389	3	ISM	ENSMUSG00000060636.15	ENSMUST00000115075.2	518	4	370	-30	370	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGAGTTTCTCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	32877757	32880556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_32877913_32879048_32879194_32880467
ENSMUSG00000060636.15_6	chr16	+	505	5	FSM	ENSMUSG00000060636.15	ENSMUST00000115079.8	510	5	4	1	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCTGTCCTAAATTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	32876839	32880545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32876926_32877505_32877549_32877759_32877913_32879048_32879194_32880467
ENSMUSG00000060639.6_0	chr13	-	712	1	FSM	ENSMUSG00000060639.6	ENSMUST00000102977.4	727	1	8	7	8	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAACCAATGGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	22225524	22224812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_22224800_22225500
ENSMUSG00000060657.9_0	chr16	-	7724	27	FSM	ENSMUSG00000060657.9	ENSMUST00000090300.6	7751	27	19	8	19	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATCATCTGTAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	13977112	13927044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_13929636_13932046_13932218_13933588_13933706_13933853_13933915_13935146_13935360_13938087_13938319_13943805_13944034_13944919_13945123_13946374_13946509_13946614_13946758_13947509_13947731_13949310_13949487_13950223_13950344_13950433_13950671_13954801_13954883_13956206_13956386_13958046_13958237_13959506_13959666_13959751_13959910_13960095_13960522_13963780_13963954_13964587_13964706_13966879_13967107_13969005_13969181_13969889_13970577_13971695_13971896_13977007
ENSMUSG00000060671.13_0	chr3	-	5522	27	FSM	ENSMUSG00000060671.13	ENSMUST00000069805.14	5559	27	29	8	29	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	89867907	89846795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853373_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89867591
ENSMUSG00000060671.13_1	chr3	-	5682	28	FSM	ENSMUSG00000060671.13	ENSMUST00000107396.8	5705	28	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGTGAGTAATTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	89870800	89846795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89848739_89848981_89849113_89850636_89850776_89850920_89851167_89851415_89851500_89852303_89852528_89852788_89852973_89853227_89853445_89853485_89853592_89853734_89853847_89853931_89854097_89855110_89855227_89855353_89855543_89855693_89855860_89856275_89856320_89857115_89857325_89859981_89860179_89861508_89861598_89861746_89861906_89864317_89864398_89864604_89864676_89865115_89865189_89865284_89865347_89865595_89865695_89865815_89865930_89866297_89866357_89868381_89868449_89870463
ENSMUSG00000060675.14_0	chr19	+	3516	5	FSM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	5	2	5	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGCTGTAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	7534828	7565908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7534930_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060675.14_3	chr19	+	1891	5	FSM	ENSMUSG00000060675.14	ENSMUST00000136756.2	1901	5	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAGAAAGAAGGAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7534856	7564073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_7535168_7535296_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060675.14_5	chr19	+	3417	4	ISM	ENSMUSG00000060675.14	ENSMUST00000025925.11	3523	5	471	2	445	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGAGTTGCTGTAGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	7535294	7565908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_7535361_7552301_7552405_7556318_7556588_7562929
ENSMUSG00000060679.15_0	chr1	+	1406	11	FSM	ENSMUSG00000060679.15	ENSMUST00000057208.13	1418	11	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCCCTTTTTTTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	42890404	42944842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_42890587_42901628_42901809_42918914_42918978_42919055_42919087_42926866_42926947_42934509_42934578_42935252_42935329_42937599_42937769_42938600_42938710_42942454_42942625_42944564
ENSMUSG00000060680.3_0	chr14	-	661	1	FSM	ENSMUSG00000060680.3	ENSMUST00000074642.3	666	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCCCCCCCCCCCCCCCC	NA	NA	NA	NA	NA	NA	NA	NA	55658241	55657580	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55657600_55658200
ENSMUSG00000060681.16_0	chrX	+	4960	16	FSM	ENSMUSG00000060681.16	ENSMUST00000077741.12	4976	16	4	12	4	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTAAAGGTATGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55655138	55709578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ENSMUSG00000060681.16_5	chrX	+	4563	17	FSM	ENSMUSG00000060681.16	ENST00000630721.3	4584	17	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGGAAGGGCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	55655330	55709283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55655548_55665685_55665886_55667970_55668049_55668347_55668425_55668719_55668833_55673753_55673860_55678809_55678952_55680145_55680252_55680537_55680627_55683634_55683749_55688727_55688840_55691159_55691314_55695868_55695959_55696987_55697019_55700333_55700414_55703618_55703725_55706535
ENSMUSG00000060703.13_0	chr2	-	1339	6	FSM	ENSMUSG00000060703.13	ENSMUST00000074606.11	1354	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACGCCGCTCACTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	60114825	60082344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_60082836_60085414_60085442_60087376_60087548_60088226_60088344_60102445_60102557_60114403
ENSMUSG00000060708.5_0	chr5	-	1269	1	FSM	ENSMUSG00000060708.5	ENSMUST00000071949.5	1273	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	417	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATTTCCTTCTGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	36905990	36904721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_36904700_36906000
ENSMUSG00000060716.8_0	chr12	+	4414	28	FSM	ENSMUSG00000060716.8	ENST00000329153.10	4428	28	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCATCTTTTTATATTA	NA	NA	NA	NA	NA	NA	NA	NA	79087307	79126693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_79087437_79095965_79096029_79097039_79097190_79100369_79100454_79101262_79101345_79101433_79102189_79108745_79108828_79109308_79109401_79110892_79111044_79111221_79111361_79112434_79112546_79113394_79113482_79113847_79114010_79114735_79114817_79115145_79115329_79115792_79115902_79116677_79116791_79117561_79117739_79118070_79118169_79119509_79119688_79120172_79120329_79121363_79121465_79122174_79122317_79123227_79123371_79123479_79123610_79125421_79125509_79125733_79125881_79126211
ENSMUSG00000060733.14_0	chr10	+	5420	6	FSM	ENSMUSG00000060733.14	ENSMUST00000079252.13	5447	6	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAACGTCTTCCGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	71183612	71221708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_71183921_71199279_71199366_71201838_71201936_71208537_71208711_71212534_71212617_71217034
ENSMUSG00000060739.9_0	chr13	-	2679	6	FSM	ENSMUSG00000060739.9	ENSMUST00000073456.9	2700	6	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAATAAATTTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	97274435	97265942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_97267737_97268350_97268544_97270046_97270227_97271801_97271953_97272028_97272217_97274262
ENSMUSG00000060743.13_0	chr1	-	2818	4	FSM	ENSMUSG00000060743.13	ENSMUST00000161308.8	2841	4	10	13	10	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	7628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAATAGAAGAACTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	180641187	180628409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180641035
ENSMUSG00000060743.13_5	chr1	-	584	4	FSM	ENSMUSG00000060743.13	ENST00000666609.1	608	4	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCTCAAAAAAATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	180640378	180630615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180630771_180637681_180637836_180639363_180639515_180640254
ENSMUSG00000060771.16_0	chr1	-	3012	16	FSM	ENSMUSG00000060771.16	ENST00000674128.1	3027	16	10	5	9	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTATTTTTTGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	37894446	37793852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_37794603_37800029_37800177_37800510_37800616_37802387_37802591_37822897_37823108_37840800_37840987_37843709_37843821_37846017_37846187_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880434_37881535_37881602_37888311_37888528_37894325
ENSMUSG00000060771.16_9	chr1	-	3012	20	FSM	ENSMUSG00000060771.16	ENST00000355053.8	3038	20	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGGAAAAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	37904320	37794277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_37794603_37800029_37800177_37800510_37800616_37802387_37802591_37822897_37823108_37840800_37840987_37843709_37843821_37846017_37846187_37850052_37850109_37854612_37854768_37858605_37858722_37873266_37873419_37874338_37874417_37874502_37874674_37879579_37879739_37880265_37880390_37881535_37881602_37888311_37888528_37894325_37894455_37904186
ENSMUSG00000060798.8_0	chr3	+	1567	2	FSM	ENSMUSG00000060798.8	ENSMUST00000061590.6	1589	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTGCATGTTTGCACTTG	NA	NA	NA	NA	NA	NA	NA	NA	40585449	40609039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_40586113_40608135
ENSMUSG00000060802.9_0	chr2	+	835	4	FSM	ENSMUSG00000060802.9	ENSMUST00000102476.5	860	4	8	17	8	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	5272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAAATAAAAAACTAAA	NA	NA	NA	NA	NA	NA	NA	NA	121978174	121983547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121978286_121981353_121981633_121982127_121982157_121983131
ENSMUSG00000060803.7_0	chr19	-	801	7	FSM	ENSMUSG00000060803.7	ENSMUST00000169613.4	821	7	11	9	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGAAGAGGTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	4087974	4085415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4085662_4085823_4085932_4086687_4086792_4087103_4087192_4087289_4087397_4087584_4087621_4087862
ENSMUSG00000060860.9_0	chr7	-	1226	4	FSM	ENSMUSG00000060860.9	ENSMUST00000079496.9	1238	4	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCAGTTTCTATGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4815584	4811019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4811484_4813420_4813612_4814407_4814556_4815161
ENSMUSG00000060862.11_0	chr4	-	7114	18	ISM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	29947	9	29947	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCAACTGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	136746059	136707051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716077_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334
ENSMUSG00000060862.11_1	chr4	-	7161	19	FSM	ENSMUSG00000060862.11	ENSMUST00000049583.8	7192	19	22	9	22	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGCAACTGTGGCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	136775984	136707051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_136710556_136712124_136712352_136713793_136713881_136714519_136714683_136715858_136716077_136718808_136718974_136721655_136721863_136722561_136723024_136723335_136723505_136725131_136725266_136725807_136726010_136726786_136726924_136728204_136728286_136728511_136728705_136734348_136734492_136735045_136735209_136744587_136744722_136745334_136746079_136775956
ENSMUSG00000060890.12_0	chrX	+	1149	13	FSM	ENSMUSG00000060890.12	ENST00000374495.7	1161	13	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCCTGGGGAGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	99649129	99661075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_99649228_99650488_99650520_99650669_99650731_99650927_99650973_99655353_99655554_99655657_99655718_99656395_99656464_99657103_99657240_99657434_99657520_99657736_99657810_99658207_99658346_99660505_99660590_99661005
ENSMUSG00000060904.15_0	chr10	+	2059	6	FSM	ENSMUSG00000060904.15	ENSMUST00000116234.9	2080	6	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	5096	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCAGTAACGAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	88566938	88579944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_88567427_88569404_88569543_88571759_88571842_88572952_88573065_88577768_88577948_88578884
ENSMUSG00000060913.7_0	chr3	+	1941	10	FSM	ENSMUSG00000060913.7	ENST00000276573.11	1959	10	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATAATATTTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	19698549	19745753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19725087_19725322_19725668_19725819_19726919_19727162_19728417_19728706_19729923_19730012_19745640
ENSMUSG00000060913.7_7	chr3	+	1065	5	FSM	ENSMUSG00000060913.7	ENST00000350034.4	1073	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGCAAAACAAAACAATAC	NA	NA	NA	NA	NA	NA	NA	NA	19698547	19745877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_19698941_19699437_19699611_19713291_19713458_19715948_19716045_19745640
ENSMUSG00000060923.6_0	chr11	-	842	4	FSM	ENSMUSG00000060923.6	ENSMUST00000074613.4	863	4	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAAAATTACCTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	30599577	30456001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_30456440_30582207_30582318_30583685_30583703_30599300
ENSMUSG00000060935.7_0	chr10	+	3598	3	FSM	ENSMUSG00000060935.7	ENSMUST00000095383.6	3616	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACAAAGATGGAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	84938500	84953441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84938862_84946662_84946730_84950271
ENSMUSG00000060935.7_2	chr10	+	752	3	FSM	ENSMUSG00000060935.7	ENST00000547081.1	770	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCAACCGCTAAACTGCT	NA	NA	NA	NA	NA	NA	NA	NA	84939589	84950630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_84939916_84946662_84946730_84950271
ENSMUSG00000060938.15_0	chr11	+	521	4	FSM	ENSMUSG00000060938.15	ENSMUST00000073471.13	526	4	0	5	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTCCTGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68792408	68795355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_68792451_68793095_68793269_68794004_68794146_68795190
ENSMUSG00000060938.15_14	chr11	+	471	3	ISM	ENSMUSG00000060938.15	ENSMUST00000167436.3	606	4	643	4	643	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTAGTCCTGTCTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68793103	68795355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_68793269_68794004_68794146_68795190
ENSMUSG00000060950.13_0	chr12	+	2421	3	FSM	ENSMUSG00000060950.13	ENSMUST00000084947.10	2433	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTTATTGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111644544	111650330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111645397_111647235_111647503_111649028
ENSMUSG00000060950.13_1	chr12	+	2118	4	FSM	ENSMUSG00000060950.13	ENSMUST00000168338.2	2131	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCTTATTGTCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	111644545	111650330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111644735_111645036_111645397_111647235_111647503_111649028
ENSMUSG00000060981.8_0	chr13	+	446	1	FSM	ENSMUSG00000060981.8	ENSMUST00000102972.6	470	1	24	0	24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTGTGCAACGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	23715243	23715689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23715200_23715700
ENSMUSG00000060989.9_2	chr4	+	1736	1	FSM	ENSMUSG00000060989.9	ENSMUST00000125165.2	1119	1	71	-688	71	688	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATTTAATAGCATTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	12232903	12234639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_12232900_12234600
ENSMUSG00000060992.10_1	chr15	+	817	8	FSM	ENSMUSG00000060992.10	ENST00000455864.6	817	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGCCCTCATCCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	103181326	103207495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103181369_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_10	chr15	+	1630	8	ISM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	16199	6	16197	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	103197535	103208289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_16	chr15	+	1569	7	ISM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	17764	7	17762	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTGCCTTTGTGTGATG	NA	NA	NA	NA	NA	NA	NA	NA	103199100	103208288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_2	chr15	+	378	7	FSM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTCTGAGCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	103181331	103207166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103181369_103197527_103197597_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_4	chr15	+	1670	9	FSM	ENSMUSG00000060992.10	ENSMUST00000100162.5	1676	9	0	6	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGCCTTTGTGTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	103181336	103208289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_103181369_103197527_103197597_103199101_103199184_103199755_103199848_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000060992.10_8	chr15	+	333	6	ISM	ENSMUSG00000060992.10	ENST00000549116.5	380	7	16204	2	16197	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTTCTGAGCCCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	103197535	103207166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_103197597_103203148_103203205_103204959_103205038_103205160_103205213_103206313_103206353_103207119
ENSMUSG00000061013.7_0	chr18	-	3630	7	FSM	ENSMUSG00000061013.7	ENSMUST00000079788.7	3650	7	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCAGTGATCATATGG	NA	NA	NA	NA	NA	NA	NA	NA	7004763	6934520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_6937055_6937167_6937202_6992037_6992374_6992777_6992935_7000592_7000753_7002356_7002624_7004621
ENSMUSG00000061024.9_0	chr1	+	2027	1	FSM	ENSMUSG00000061024.9	ENSMUST00000072079.9	2048	1	14	7	14	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	753	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTAGTATTTGCATTAT	NA	NA	NA	NA	NA	NA	NA	NA	9615646	9617673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_9615600_9617700
ENSMUSG00000061028.8_0	chr7	-	2174	21	FSM	ENSMUSG00000061028.8	ENSMUST00000086041.7	2180	21	2	4	2	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACATGCTGTCCCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	19338409	19314963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19315084_19315305_19315331_19316156_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114_19337231_19338336
ENSMUSG00000061028.8_10	chr7	-	1819	18	FSM	ENSMUSG00000061028.8	ENST00000391953.8	1835	18	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAAAACGGAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	19337216	19315042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328465_19329454_19329482_19337114
ENSMUSG00000061028.8_8	chr7	-	2006	19	FSM	ENSMUSG00000061028.8	ENST00000221455.8	2021	19	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAAAACGGAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	19337217	19315042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318394_19318456_19318708_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ENSMUSG00000061028.8_9	chr7	-	1949	18	FSM	ENSMUSG00000061028.8	ENST00000544944.6	1964	18	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAGAAAACGGAGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	19337217	19315042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19315102_19316152_19316240_19318079_19318127_19318208_19318268_19318704_19318749_19319014_19319273_19320265_19320536_19320636_19320853_19321749_19321792_19322515_19322590_19322670_19322750_19324163_19324261_19325014_19325164_19325917_19326003_19328397_19328478_19328831_19328934_19329383_19329482_19337114
ENSMUSG00000061032.10_0	chr10	-	1968	13	FSM	ENSMUSG00000061032.10	ENSMUST00000062678.11	1984	13	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCACATGGCTGCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	78248867	78236225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78236819_78237683_78237801_78238258_78238279_78238443_78238542_78239338_78239419_78240758_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237_78247321_78248653
ENSMUSG00000061032.10_5	chr10	-	841	9	FSM	ENSMUSG00000061032.10	ENST00000497547.2	851	9	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAAAGTGAGTCAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	78247318	78238451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78238542_78239338_78239419_78240931_78241121_78241248_78241314_78241399_78241530_78244246_78244309_78244967_78245054_78246799_78246858_78247237
ENSMUSG00000061046.10_0	chr17	-	1393	9	FSM	ENSMUSG00000061046.10	ENSMUST00000077938.10	1405	9	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGCAGGTCTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26004636	26001763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977_26004169_26004401
ENSMUSG00000061046.10_1	chr17	-	1111	8	FSM	ENSMUSG00000061046.10	ENSMUST00000133071.8	1128	8	16	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGCAGGTCTGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26004540	26001763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004396
ENSMUSG00000061046.10_7	chr17	-	1057	8	FSM	ENSMUSG00000061046.10	ENSMUST00000138759.8	1074	8	10	7	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCAGTGTGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	26004531	26001803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26004401
ENSMUSG00000061046.10_9	chr17	-	1255	8	FSM	ENSMUSG00000061046.10	ENSMUST00000150324.8	1267	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCCCAGTGTGGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	26004305	26001803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26002153_26002476_26002557_26002758_26002861_26003048_26003153_26003233_26003343_26003428_26003547_26003634_26003700_26003977
ENSMUSG00000061079.15_0	chr7	+	1935	15	FSM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	5	14	5	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAACAGGAGGAGGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	109660897	109693600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109660983_109668690_109668810_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_12	chr7	+	3003	16	FSM	ENSMUSG00000061079.15	ENSMUST00000084727.11	3003	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAATACTTTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	109660916	109694594	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109660983_109668690_109668810_109669684_109669778_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061079.15_20	chr7	+	1854	14	ISM	ENSMUSG00000061079.15	ENST00000396597.7	1954	15	7796	12	7760	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACAGGAGGAGGAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109668688	109693602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_109668810_109670578_109670663_109671325_109671410_109673274_109673472_109674847_109674923_109676263_109676384_109679474_109679551_109680998_109681125_109682397_109682578_109685319_109685548_109687934_109688084_109690971_109691134_109692276_109692424_109693497
ENSMUSG00000061082.12_0	chrX	-	1026	3	FSM	ENSMUSG00000061082.12	ENSMUST00000074861.9	1041	3	8	7	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTATCAGTTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	52328980	52158878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52159766_52187295_52187368_52328913
ENSMUSG00000061082.12_2	chrX	-	145	2	FSM	ENSMUSG00000061082.12	ENST00000359237.9	155	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGAGGTTAGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52237339	52187303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52187368_52237258
ENSMUSG00000061082.12_3	chrX	-	149	2	NNC	ENSMUSG00000061082.12	novel	155	2	NA	NA	5	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGAGGTTAGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	52237339	52187303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chrX_-_52187368_52237254
ENSMUSG00000061086.13_0	chr11	+	852	9	FSM	ENSMUSG00000061086.13	ENSMUST00000018800.9	879	9	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTAATCCCTCCGTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	104441508	104478034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104441586_104452379_104452402_104468246_104468401_104471227_104471256_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ENSMUSG00000061086.13_2	chr11	+	933	8	FSM	ENSMUSG00000061086.13	ENSMUST00000106957.8	943	8	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATCCCTCCGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	104467815	104478036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104467994_104468246_104468401_104471227_104471256_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ENSMUSG00000061086.13_7	chr11	+	886	7	FSM	ENSMUSG00000061086.13	ENSMUST00000106956.10	900	7	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATCCCTCCGTTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	104468115	104478036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_104468401_104471227_104471256_104474803_104474954_104475264_104475439_104475762_104475841_104476552_104476598_104477910
ENSMUSG00000061104.6_0	chr8	+	782	1	FSM	ENSMUSG00000061104.6	ENSMUST00000074053.6	789	1	2	5	2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1060	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96551975	96552757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96552000_96552800
ENSMUSG00000061111.9_0	chr11	-	812	4	FSM	ENSMUSG00000061111.9	ENST00000457257.5	822	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTCCTACCCTGAAGCCCG	NA	NA	NA	NA	NA	NA	NA	NA	120435622	120433692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120434185_120434472_120434575_120434729_120434832_120435506
ENSMUSG00000061111.9_11	chr11	-	1126	4	ISM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	4800	7	-124	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAAGTGGCTCCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	120435753	120433720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702
ENSMUSG00000061111.9_19	chr11	-	951	2	FSM	ENSMUSG00000061111.9	ENST00000573478.5	971	2	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGGCGGTGGCACTGG	NA	NA	NA	NA	NA	NA	NA	NA	120435618	120433735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120434575_120435506
ENSMUSG00000061111.9_9	chr11	-	1195	5	FSM	ENSMUSG00000061111.9	ENSMUST00000034913.5	1205	5	3	7	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGAAGTGGCTCCATGGC	NA	NA	NA	NA	NA	NA	NA	NA	120440550	120433720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120434575_120434729_120434832_120435506_120435626_120435702_120435755_120440482
ENSMUSG00000061118.9_0	chr5	+	1646	1	FSM	ENSMUSG00000061118.9	ENSMUST00000071263.7	1661	1	8	7	8	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGTTCTTGAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	135093063	135094709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_135093100_135094700
ENSMUSG00000061119.8_0	chr7	+	2944	9	FSM	ENSMUSG00000061119.8	ENSMUST00000076052.8	2967	9	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATTAATGCATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	92524472	92583781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92567035_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061119.8_3	chr7	+	2216	9	FSM	ENSMUSG00000061119.8	ENSMUST00000207594.2	2245	9	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCAAACCATTTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	92524525	92583211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_92524709_92550366_92550508_92554318_92554421_92559342_92559525_92566876_92566930_92568209_92568380_92576887_92577053_92577812_92578001_92582179
ENSMUSG00000061130.14_0	chr17	+	2661	6	FSM	ENSMUSG00000061130.14	ENSMUST00000080217.14	2670	6	6	3	-4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGGCACACTTTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	85265432	85322116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUSG00000061130.14_3	chr17	+	3311	6	FSM	ENSMUSG00000061130.14	ENSMUST00000112304.10	3323	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGTATCATTGGCATA	NA	NA	NA	NA	NA	NA	NA	NA	85265440	85324617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_85265823_85301107_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85322836
ENSMUSG00000061130.14_4	chr17	+	1662	5	FSM	ENSMUSG00000061130.14	ENST00000345249.8	1675	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGCCTGCGCATTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	85265476	85322021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_85265823_85310693_85310812_85312339_85312452_85312936_85312995_85320993
ENSMUSG00000061130.14_7	chr17	+	1272	5	ISM	ENSMUSG00000061130.14	ENSMUST00000234332.2	1290	6	35303	0	-1	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAACTTGAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85301106	85331246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_85301968_85310693_85310812_85312339_85312452_85312936_85312995_85331123
ENSMUSG00000061132.14_0	chr19	-	2075	17	FSM	ENSMUSG00000061132.14	ENSMUST00000054769.7	2097	17	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAAGCAACAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40982968	40917382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926172_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061132.14_1	chr19	-	1665	17	FSM	ENSMUSG00000061132.14	ENSMUST00000117695.8	1701	17	24	12	24	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAAGCAACAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40982567	40917382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_40917737_40922870_40923027_40924716_40924801_40926094_40926163_40927810_40927843_40928615_40928701_40931745_40931789_40932570_40932599_40933930_40934001_40939397_40939470_40940794_40940877_40948142_40948307_40950788_40950946_40952686_40952728_40956942_40956993_40961029_40961096_40982454
ENSMUSG00000061136.17_0	chr2	-	3768	26	FSM	ENSMUSG00000061136.17	ENSMUST00000210789.3	3773	26	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTGCACTAGTCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	53081296	53028254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081160
ENSMUSG00000061136.17_6	chr2	-	3548	26	FSM	ENSMUSG00000061136.17	ENSMUST00000239398.2	3565	26	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACTTTTGAGTAATAG	NA	NA	NA	NA	NA	NA	NA	NA	53081188	53028492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_53029283_53030472_53030605_53031630_53031693_53031778_53031876_53031954_53032042_53034795_53034892_53035244_53035383_53035631_53035749_53035835_53035928_53036105_53036221_53040649_53040784_53041690_53041842_53042457_53042567_53042969_53043135_53043475_53043541_53043975_53044085_53046634_53046998_53047904_53047930_53049274_53049329_53049569_53049691_53050787_53050899_53065027_53065045_53066397_53066429_53067364_53067446_53079980_53080113_53081034
ENSMUSG00000061143.16_0	chr3	-	5428	4	FSM	ENSMUSG00000061143.16	ENSMUST00000118075.7	5450	4	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATAAAACTGAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	51703944	51593336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51598276_51599616_51599702_51604985_51605265_51703819
ENSMUSG00000061143.16_1	chr3	-	8250	5	FSM	ENSMUSG00000061143.16	ENSMUST00000121440.4	8288	5	26	12	26	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGATAAAACTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	52012471	51593339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51598276_51599616_51599702_51604985_51605265_51762919_51764498_52011099
ENSMUSG00000061143.16_3	chr3	-	8254	5	NNC	ENSMUSG00000061143.16	novel	8288	5	NA	NA	23	-12	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAGATAAAACTGAATGT	NA	NA	NA	NA	NA	NA	NA	NA	52012474	51593339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_-_51598276_51599616_51599702_51604985_51605265_51762919_51764499_52011099
ENSMUSG00000061167.10_0	chr9	-	666	1	FSM	ENSMUSG00000061167.10	ENSMUST00000088480.4	615	1	-10	-41	-10	41	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGACAGTCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22097527	22096861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22096900_22097500
ENSMUSG00000061175.13_0	chr3	-	7285	18	FSM	ENSMUSG00000061175.13	ENSMUST00000133154.7	7299	18	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATCTAAGCTGAGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	79475096	79363287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_79367049_79369435_79369552_79372854_79373056_79386793_79386951_79387865_79389187_79396265_79396436_79396552_79396700_79400138_79400228_79400582_79400785_79407644_79407775_79413513_79413586_79415145_79415236_79415393_79415495_79419637_79419710_79419804_79419906_79422409_79422557_79425371_79425499_79474815
ENSMUSG00000061207.12_0	chr17	-	1104	7	FSM	ENSMUSG00000061207.12	ENSMUST00000077477.12	1120	7	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	327	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTCTTTCTGTGTCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	35055906	35042969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35043301_35043489_35043638_35043726_35043825_35050988_35051129_35051421_35051518_35055405_35055543_35055752
ENSMUSG00000061232.17_0	chr17	-	1562	8	FSM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGCTGTGTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	34219255	34214990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061232.17_1	chr17	-	1475	7	ISM	ENSMUSG00000061232.17	ENSMUST00000172912.8	1570	8	285	0	-15	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATGCTGTGTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	34218978	34214990	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34215451_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707
ENSMUSG00000061232.17_10	chr17	-	1600	8	FSM	ENSMUSG00000061232.17	ENSMUST00000025181.18	1619	8	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAATAAATGATAGATGA	NA	NA	NA	NA	NA	NA	NA	NA	34219307	34215031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34215478_34215589_34215629_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061232.17_13	chr17	-	883	4	FSM	ENSMUSG00000061232.17	ENST00000430151.2	895	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAGATGAGAAGGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	34218954	34216036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34216132_34216258_34216524_34218244_34218521_34218707
ENSMUSG00000061232.17_8	chr17	-	1551	7	FSM	ENSMUSG00000061232.17	ENSMUST00000236740.2	1567	7	8	8	-8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGAATCTGGGTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	34219271	34215005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34215478_34215800_34215834_34216011_34216132_34216258_34216535_34218244_34218521_34218707_34218978_34219167
ENSMUSG00000061244.15_1	chr14	-	12681	18	FSM	ENSMUSG00000061244.15	ENSMUST00000162175.9	12699	18	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTATCTAAACAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	49304099	49241553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49286160_49286356_49288776_49288925_49289754_49289850_49303582
ENSMUSG00000061244.15_13	chr14	-	2569	17	FSM	ENSMUSG00000061244.15	ENSMUST00000161504.8	2582	17	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAATTTTCAGTGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	49303840	49251211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_49251807_49252873_49253090_49253654_49253764_49254930_49255018_49256858_49256980_49260655_49260765_49270727_49270876_49272264_49272475_49273455_49273539_49274215_49274357_49274460_49274506_49275129_49275240_49276811_49276841_49279941_49280007_49288776_49288925_49289754_49289850_49303582
ENSMUSG00000061273.4_0	chrX	-	4221	4	FSM	ENSMUSG00000061273.4	ENSMUST00000059899.3	4234	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTGTGTTTGGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	55643416	55630871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_55634664_55636437_55636542_55640749_55640803_55643144
ENSMUSG00000061273.4_2	chrX	-	812	3	FSM	ENSMUSG00000061273.4	ENST00000680510.1	825	3	8	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAATGTTCGGATTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	55643423	55634234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_55634664_55636437_55636542_55643144
ENSMUSG00000061286.8_0	chr7	+	1000	6	FSM	ENSMUSG00000061286.8	ENSMUST00000079634.8	1020	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGATTCCGGTGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	25358601	25367450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25358809_25362561_25362676_25363751_25363874_25364845_25364987_25365677_25365768_25367124
ENSMUSG00000061288.14_0	chr5	+	4448	21	FSM	ENSMUSG00000061288.14	ENSMUST00000111978.8	4467	21	16	3	16	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCGCCTGGCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117258209	117413279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117258405_117323591_117323677_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ENSMUSG00000061288.14_3	chr5	+	4341	20	FSM	ENSMUSG00000061288.14	ENSMUST00000092889.12	4354	20	8	5	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCGCCTGGCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	117271667	117413279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117271841_117331693_117331905_117337056_117337129_117338135_117338238_117341314_117341361_117342363_117342461_117344711_117344826_117347618_117347711_117353413_117353508_117355223_117355306_117363304_117363473_117365937_117366145_117379160_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ENSMUSG00000061288.14_5	chr5	+	2146	8	FSM	ENSMUSG00000061288.14	ENSMUST00000111975.3	2172	8	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTACAAAAAAAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	117378534	117411916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117379296_117388925_117389163_117390606_117390736_117393923_117394128_117401629_117401870_117403965_117404179_117410161_117410345_117411737
ENSMUSG00000061298.15_5	chr4	+	1829	13	NNC	ENSMUSG00000061298.15	novel	1864	13	NA	NA	27	-12	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCACCATTACTTAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	110255014	111514695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_+_110255103_110335661_110335785_110437247_110437373_110812760_110812859_110976021_110976239_111188435_111188477_111383780_111383871_111404379_111404495_111423814_111423927_111472156_111472310_111474316_111474480_111513522_111513620_111514288
ENSMUSG00000061306.17_0	chr11	-	4562	17	FSM	ENSMUSG00000061306.17	ENSMUST00000103018.11	4578	17	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTAGACTCATGTATG	NA	NA	NA	NA	NA	NA	NA	NA	120042163	119994792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119996863_119997259_119997437_119999292_119999317_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUSG00000061306.17_1	chr11	-	4033	17	FSM	ENSMUSG00000061306.17	ENSMUST00000179094.8	4052	17	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACAAGTCTCGAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	120042125	119995283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119996863_119997259_119997437_120000197_120000222_120000257_120000363_120000891_120001363_120001663_120001832_120007690_120007848_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUSG00000061306.17_5	chr11	-	1662	11	FSM	ENSMUSG00000061306.17	ENSMUST00000076697.13	1672	11	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAATGCTGCCTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	120042162	120009697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120009971_120019248_120019356_120020026_120020139_120023502_120023686_120025605_120025709_120028682_120028808_120029811_120029956_120031418_120031513_120032425_120032472_120038546_120038665_120041805
ENSMUSG00000061313.11_0	chr8	-	4236	18	FSM	ENSMUSG00000061313.11	ENSMUST00000033975.9	4246	18	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTCATGTGGCCTTATCT	NA	NA	NA	NA	NA	NA	NA	NA	26244301	26215375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26217391_26217656_26217765_26222989_26223150_26224742_26224914_26225035_26225139_26225771_26225928_26226033_26226118_26228238_26228335_26229489_26229613_26231313_26231382_26231627_26231837_26236844_26236981_26238564_26238655_26239753_26239875_26240729_26240820_26242126_26242318_26242974_26243201_26244212
ENSMUSG00000061313.11_16	chr8	-	709	6	FSM	ENSMUSG00000061313.11	ENST00000529845.5	712	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTTCAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	26226067	26217659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225119_26225771_26225928_26226033
ENSMUSG00000061313.11_17	chr8	-	666	5	ISM	ENSMUSG00000061313.11	ENST00000529845.5	712	6	149	3	149	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTTCAATGCAG	NA	NA	NA	NA	NA	NA	NA	NA	26225918	26217659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_26217765_26222989_26223150_26224742_26224914_26225035_26225119_26225771
ENSMUSG00000061315.15_0	chr10	+	872	8	FSM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTCAGCAGGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	127871451	127884497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127871553_127872357_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_20	chr10	+	771	7	ISM	ENSMUSG00000061315.15	ENSMUST00000073868.9	885	8	914	5	854	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGACTCAGCAGGTGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	127872357	127884497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_127872430_127882036_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061315.15_8	chr10	+	860	8	FSM	ENSMUSG00000061315.15	ENST00000679092.1	864	8	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGTAAATTGAAGTATG	NA	NA	NA	NA	NA	NA	NA	NA	127871481	127884527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127871553_127872357_127872430_127882048_127882123_127882597_127882676_127883526_127883674_127883867_127883997_127884113_127884237_127884361
ENSMUSG00000061353.12_0	chr6	+	1865	3	FSM	ENSMUSG00000061353.12	ENSMUST00000112866.8	1878	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGGAGTGCACATACAT	NA	NA	NA	NA	NA	NA	NA	NA	117145506	117152028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117145678_117148442_117148561_117150452
ENSMUSG00000061353.12_2	chr6	+	3114	4	FSM	ENSMUSG00000061353.12	ENSMUST00000112871.8	3132	4	8	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATATAGCTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	117145542	117158317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117145678_117148442_117148561_117150452_117150540_117155543
ENSMUSG00000061360.9_0	chr15	-	1654	4	FSM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCCAAGAAAAAATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	81756104	81748721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81750094_81754532_81754700_81755366_81755391_81756013
ENSMUSG00000061360.9_1	chr15	-	1564	3	ISM	ENSMUSG00000061360.9	ENSMUST00000023117.10	1663	4	721	1	721	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTCCAAGAAAAAATTCATG	NA	NA	NA	NA	NA	NA	NA	NA	81755391	81748721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_81750094_81754532_81754700_81755366
ENSMUSG00000061361.3_0	chr16	-	958	1	FSM	ENSMUSG00000061361.3	ENSMUST00000078554.2	939	1	-23	4	-23	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCATTCTTTCATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	19349691	19348733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_19348700_19349700
ENSMUSG00000061361.3_1	chr16	-	993	2	FSM	ENSMUSG00000061361.3	ENST00000641714.1	1001	2	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCATTCTTTCATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	19350175	19348733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_19349706_19350154
ENSMUSG00000061371.8_0	chr10	+	2339	4	FSM	ENSMUSG00000061371.8	ENSMUST00000210325.2	2360	4	17	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTACAGTTTTATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	81883973	81897411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81884064_81894203_81894331_81894516_81894578_81895350
ENSMUSG00000061371.8_1	chr10	+	2257	3	FSM	ENSMUSG00000061371.8	ENSMUST00000209622.2	2284	3	18	9	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTACAGTTTTATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	81883994	81897411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81884064_81894203_81894331_81895350
ENSMUSG00000061371.8_2	chr10	+	2189	2	FSM	ENSMUSG00000061371.8	ENSMUST00000105313.2	1893	2	-48	-248	-48	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTACAGTTTTATCTAT	NA	NA	NA	NA	NA	NA	NA	NA	81894202	81897411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81894331_81895350
ENSMUSG00000061374.15_0	chr7	-	2481	2	ISM	ENSMUSG00000061374.15	ENSMUST00000208944.2	2306	3	222	-211	222	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTACTGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5016015	5010062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_5012205_5015676
ENSMUSG00000061374.15_1	chr7	-	2541	3	FSM	ENSMUSG00000061374.15	ENSMUST00000077385.15	2546	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTACTGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5017677	5010062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_5012205_5015676_5016022_5017623
ENSMUSG00000061374.15_2	chr7	-	2603	3	FSM	ENSMUSG00000061374.15	ENSMUST00000167804.9	2637	3	29	5	29	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTACTGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5017223	5010062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_5012205_5015676_5016022_5017107
ENSMUSG00000061374.15_3	chr7	-	2633	3	FSM	ENSMUSG00000061374.15	ENSMUST00000165320.3	2653	3	15	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCATTACTGTCTTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	5017681	5010062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_5012205_5015676_5016022_5017535
ENSMUSG00000061387.4_0	chr19	+	915	1	FSM	ENSMUSG00000061387.4	ENSMUST00000080162.2	951	1	8	28	8	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	669	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTTCATGGAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	13631817	13632732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_13631800_13632700
ENSMUSG00000061387.4_1	chr19	+	942	2	FSM	ENSMUSG00000061387.4	ENST00000395079.2	948	2	5	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGTGTATTCTAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	13631811	13685660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_13632733_13685639
ENSMUSG00000061393.15_0	chr9	+	3158	11	FSM	ENSMUSG00000061393.15	ENSMUST00000215746.2	3175	11	6	11	6	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAATAGAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	119231515	119264050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_119231664_119256520_119256729_119257032_119257143_119257266_119257419_119257490_119257635_119258930_119259075_119259285_119259435_119260289_119260405_119261554_119261694_119261778_119261910_119262332
ENSMUSG00000061410.7_0	chr8	-	7419	13	FSM	ENSMUSG00000061410.7	ENSMUST00000046386.5	7444	13	1	24	1	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAAATTAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122379639	122325465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_122329071_122330546_122332008_122332088_122332230_122332925_122333057_122333615_122333708_122335128_122335412_122335818_122335874_122335959_122336055_122336855_122336966_122338064_122338137_122345373_122345448_122355304_122355429_122378463
ENSMUSG00000061411.13_0	chr2	-	6382	11	FSM	ENSMUSG00000061411.13	ENSMUST00000035346.14	6399	11	4	13	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACAAACCTTACACTGA	NA	NA	NA	NA	NA	NA	NA	NA	153371887	153249394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_153253750_153258563_153258766_153259282_153259406_153259607_153259800_153259879_153260066_153262451_153262730_153278125_153278268_153312607_153312718_153319790_153319903_153325606_153325763_153371361
ENSMUSG00000061436.16_12	chr6	-	2644	11	FSM	ENSMUSG00000061436.16	ENST00000342645.7	2658	11	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACAGCACAGCCATGCCA	NA	NA	NA	NA	NA	NA	NA	NA	38796236	38680363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38680622_38695706_38695869_38698389_38698533_38706855_38706978_38707803_38708012_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164
ENSMUSG00000061436.16_2	chr6	-	3864	15	FSM	ENSMUSG00000061436.16	ENST00000428878.6	3884	15	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTTAAAAAAGAAAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	38852892	38674849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38675532_38676186_38676344_38680373_38680622_38692874_38693157_38695688_38695869_38698389_38698533_38706855_38706978_38707803_38707931_38714292_38714456_38720010_38720196_38722598_38722686_38724381_38724502_38724808_38724933_38795164_38796249_38852732
ENSMUSG00000061451.14_0	chr19	-	3991	2	FSM	ENSMUSG00000061451.14	ENSMUST00000077066.8	4006	2	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGCCATTGTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	5135552	5129365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5133130_5135325
ENSMUSG00000061455.14_0	chr4	+	5759	8	FSM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATAAACTGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	48124925	48186496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_48124959_48131764_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUSG00000061455.14_2	chr4	+	5704	7	ISM	ENSMUSG00000061455.14	ENSMUST00000107720.9	5770	8	6861	11	6852	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACATAAACTGAATTCC	NA	NA	NA	NA	NA	NA	NA	NA	48131786	48186496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_48131950_48140419_48140486_48158810_48159034_48166927_48167044_48167205_48167257_48180669_48180757_48181498
ENSMUSG00000061458.10_0	chr12	+	3002	21	FSM	ENSMUSG00000061458.10	ENSMUST00000046011.12	3021	21	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGCTACTGGCTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	17398470	17480089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17419466_17419617_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061458.10_27	chr12	+	1841	19	ISM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	1964	5	1964	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACCAAAGAAATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	17400518	17479230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061458.10_5	chr12	+	1907	20	FSM	ENSMUSG00000061458.10	ENST00000345985.7	1914	20	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGACCAAAGAAATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	17398556	17479230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17398621_17400516_17400563_17402641_17402741_17405237_17405316_17406921_17406960_17408102_17408240_17409090_17409157_17411134_17411196_17412595_17412682_17418309_17418389_17423562_17423630_17429248_17429302_17452073_17452201_17454971_17455052_17455233_17455333_17456807_17456898_17466028_17466200_17466714_17466963_17474650_17474754_17479115
ENSMUSG00000061461.12_0	chr5	+	915	3	FSM	ENSMUSG00000061461.12	ENSMUST00000147148.5	922	3	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCTGGTGTGTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	53424485	53435881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_53424701_53434484_53434542_53435238
ENSMUSG00000061462.19_0	chr11	-	8672	31	NIC	ENSMUSG00000061462.19	novel	8959	33	NA	NA	7	-28297	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACCCTCATTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	59027182	58963929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_58964200_58964335_58964603_58965716_58965990_58966959_58967227_58967309_58967577_58967671_58967939_58968506_58968777_58969004_58969272_58969627_58969733_58970382_58970537_58970635_58970746_58970926_58971194_58971522_58971790_58972620_58972891_58973017_58973285_58973442_58973722_58994100_58994377_58997120_58997397_58998567_58998844_59003344_59003621_59006484_59006761_59013445_59013722_59015346_59015623_59018888_59019165_59021244_59021490_59022372_59022655_59023286_59023554_59023846_59024156_59024525_59024787_59025376_59025647_59026219
ENSMUSG00000061462.19_2	chr11	-	8949	32	NIC	ENSMUSG00000061462.19	novel	8959	33	NA	NA	6	-28297	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAACCCTCATTTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	59027183	58963929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_58964200_58964335_58964603_58965716_58965990_58966959_58967227_58967309_58967577_58967671_58967939_58968506_58968777_58969004_58969272_58969627_58969733_58970382_58970537_58970635_58970746_58970926_58971194_58971522_58971790_58972620_58972891_58973017_58973285_58973442_58973722_58994100_58994377_58997120_58997397_58998567_58998844_59003344_59003621_59006484_59006761_59013445_59013722_59015346_59015623_59018888_59019165_59020395_59020672_59021244_59021490_59022372_59022655_59023286_59023554_59023846_59024156_59024525_59024787_59025376_59025647_59026219
ENSMUSG00000061474.12_0	chr13	-	681	4	FSM	ENSMUSG00000061474.12	ENSMUST00000109333.8	701	4	10	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAATAAATGTCCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	100881157	100872472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100872782_100875521_100875710_100877675_100877740_100881037
ENSMUSG00000061474.12_3	chr13	-	550	4	FSM	ENSMUSG00000061474.12	ENSMUST00000078573.5	571	4	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGCCCCACAAGCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	100881149	100872589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100872782_100875521_100875704_100877675_100877740_100881037
ENSMUSG00000061477.5_0	chr12	-	946	7	FSM	ENSMUSG00000061477.5	ENSMUST00000074267.5	954	7	8	0	8	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	13099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTATGTCCTATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28685944	28680852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578_28685663_28685854
ENSMUSG00000061477.5_1	chr12	-	852	6	FSM	ENSMUSG00000061477.5	ENSMUST00000221871.2	820	6	190	-222	190	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTCCACATTTTATGTC	NA	NA	NA	NA	NA	NA	NA	NA	28685666	28680860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_28681193_28681622_28681774_28683766_28683832_28684207_28684352_28685414_28685487_28685578
ENSMUSG00000061479.16_0	chr7	-	1326	7	FSM	ENSMUSG00000061479.16	ENSMUST00000122202.8	1336	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895660	26886431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895418
ENSMUSG00000061479.16_1	chr7	-	1279	6	FSM	ENSMUSG00000061479.16	ENSMUST00000163311.9	1288	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895176	26886431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868
ENSMUSG00000061479.16_2	chr7	-	1354	7	FSM	ENSMUSG00000061479.16	ENSMUST00000080356.10	1365	7	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTTGTCTGCTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26895685	26886431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26886790_26888290_26888380_26888783_26888958_26891028_26891206_26892294_26892468_26894868_26894982_26895415
ENSMUSG00000061510.4_0	chr14	-	2912	1	FSM	ENSMUSG00000061510.4	ENSMUST00000181311.2	2919	1	2	5	2	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTTTGTTGAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	47069482	47066570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47066600_47069500
ENSMUSG00000061518.12_1	chr1	+	850	4	FSM	ENSMUSG00000061518.12	ENSMUST00000193210.6	865	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5039	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACAGCCTGGCTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	36730573	36732756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_36730771_36731291_36731366_36731531_36731632_36732277
ENSMUSG00000061533.17_0	chr12	-	4776	26	FSM	ENSMUSG00000061533.17	ENSMUST00000141429.8	4807	26	24	7	24	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGAACATTGAATGATGC	NA	NA	NA	NA	NA	NA	NA	NA	91351159	90965272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_90966434_90975606_90975710_90986065_90986180_90989173_90989252_91029915_91029940_91050447_91050498_91180338_91180532_91197568_91197629_91200817_91200995_91222348_91222514_91226759_91227411_91233509_91233861_91256262_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91336835_91336971_91348421_91348563_91351007
ENSMUSG00000061533.17_6	chr12	-	1425	13	FSM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAAAGCAACGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	91351102	91256294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91348421_91348563_91351007
ENSMUSG00000061533.17_7	chr12	-	1332	12	ISM	ENSMUSG00000061533.17	ENST00000216517.10	1445	13	2547	11	2547	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAAAGCAACGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	91348564	91256294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_91256415_91260807_91260941_91262976_91263052_91265764_91265852_91292288_91292406_91300024_91300098_91305832_91305925_91314299_91314416_91315523_91315651_91331133_91331221_91333116_91333279_91348421
ENSMUSG00000061536.14_0	chr9	-	5708	8	FSM	ENSMUSG00000061536.14	ENSMUST00000078547.12	5713	8	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGTGTGTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121534025	121509115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121529618_121529744_121533989
ENSMUSG00000061536.14_1	chr9	-	5667	7	ISM	ENSMUSG00000061536.14	ENSMUST00000078547.12	5713	8	4287	5	4287	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAATGTGTGTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	121529738	121509115	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121529618
ENSMUSG00000061536.14_4	chr9	-	2643	7	FSM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	7	19	7	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAATTAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	121534088	121512118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599_121524809_121533989
ENSMUSG00000061536.14_6	chr9	-	2546	6	ISM	ENSMUSG00000061536.14	ENSMUST00000111560.10	2669	7	9285	19	9215	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTAATTAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	121524810	121512118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_121513925_121514588_121514655_121517264_121517384_121519301_121519482_121521975_121522140_121524599
ENSMUSG00000061544.14_0	chr17	+	4505	6	FSM	ENSMUSG00000061544.14	ENSMUST00000065871.14	4525	6	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATCTATCAAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	21952716	21967941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21952940_21955038_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUSG00000061544.14_2	chr17	+	4282	5	ISM	ENSMUSG00000061544.14	ENSMUST00000182603.2	4315	6	146	9	146	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATCTATCAAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	21955038	21967941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_21955103_21958415_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUSG00000061544.14_4	chr17	+	4220	4	ISM	ENSMUSG00000061544.14	ENSMUST00000182603.2	4315	6	3521	9	3521	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATCTATCAAGGACTTG	NA	NA	NA	NA	NA	NA	NA	NA	21958413	21967941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_21958494_21961476_21961604_21962839_21962939_21964027
ENSMUSG00000061559.16_2	chr9	-	1177	11	FSM	ENSMUSG00000061559.16	ENSMUST00000051822.13	1187	11	0	10	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAACCACCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54641801	54624452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641758
ENSMUSG00000061559.16_3	chr9	-	1132	10	ISM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	3084	5	3047	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAACCACCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54638719	54624452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670
ENSMUSG00000061559.16_4	chr9	-	1085	9	ISM	ENSMUSG00000061559.16	ENSMUST00000130368.8	1162	11	3834	10	3819	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAACCACCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54637947	54624452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917
ENSMUSG00000061559.16_6	chr9	-	1278	11	FSM	ENSMUSG00000061559.16	ENSMUST00000121204.8	1290	11	7	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAACCACCTGCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	54641796	54624452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_54624720_54626534_54626614_54627543_54627637_54630117_54630212_54631334_54631429_54631609_54631759_54634872_54635046_54635453_54635560_54637917_54637946_54638670_54638722_54641652
ENSMUSG00000061561.6_0	chr8	+	4114	2	FSM	ENSMUSG00000061561.6	ENSMUST00000213940.2	4145	2	31	0	31	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTTTGAGGAATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	72837051	72856928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72837306_72853068
ENSMUSG00000061577.13_0	chr8	+	2787	12	FSM	ENSMUSG00000061577.13	ENSMUST00000074570.10	2802	12	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAATTCACCCAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	95650321	95669893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_95650386_95659975_95660058_95660123_95660200_95660502_95660660_95661088_95661209_95661677_95661795_95662987_95663141_95663851_95663971_95664200_95664470_95665168_95665287_95668132_95668411_95668659
ENSMUSG00000061577.13_2	chr8	+	2734	11	ISM	ENSMUSG00000061577.13	ENSMUST00000074570.10	2802	12	9655	3	9655	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGCCTTACCACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	95659976	95669905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_95660058_95660123_95660200_95660502_95660660_95661088_95661209_95661677_95661795_95662987_95663141_95663851_95663971_95664200_95664470_95665168_95665287_95668132_95668411_95668659
ENSMUSG00000061589.15_0	chr10	+	6799	28	FSM	ENSMUSG00000061589.15	ENSMUST00000105336.9	6808	28	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGAGCCAGTTCTCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	80591042	80631289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80591359_80600435_80600480_80601996_80602072_80604438_80604503_80606971_80607201_80608937_80609033_80609539_80609603_80613389_80613446_80614096_80614177_80616676_80616746_80617201_80617309_80617976_80618019_80619017_80619126_80619257_80619490_80619706_80619821_80620398_80620491_80620575_80620678_80620883_80621022_80621331_80621458_80621615_80622101_80622187_80622324_80622837_80622985_80623667_80623798_80624348_80624927_80625147_80625354_80626153_80626219_80626444_80627396_80629340
ENSMUSG00000061603.9_0	chr12	+	4551	12	FSM	ENSMUSG00000061603.9	ENSMUST00000219786.2	4564	12	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAATTAATGATCTC	NA	NA	NA	NA	NA	NA	NA	NA	52842618	53195533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_52842984_52927421_52927674_52933091_52934847_52958583_52958707_52983917_52984015_52985125_52985290_53057256_53057406_53072503_53072625_53115889_53116037_53119072_53119295_53151297_53151514_53194593
ENSMUSG00000061607.16_0	chr17	+	7317	16	FSM	ENSMUSG00000061607.16	ENSMUST00000082337.13	7335	16	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATATTTTCCTGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	36152418	36170556	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36152572_36155323_36155463_36156730_36157112_36157193_36157270_36158214_36159558_36159680_36159750_36159898_36159992_36161186_36161898_36162004_36162049_36163306_36164781_36164912_36165005_36165094_36165215_36165308_36165492_36165747_36165874_36165991_36166103_36168354
ENSMUSG00000061613.14_0	chr17	-	1025	8	FSM	ENSMUSG00000061613.14	ENSMUST00000014684.6	1046	8	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTATTGGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	31877853	31866062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31870619_31870687_31873952_31874041_31877626
ENSMUSG00000061613.14_1	chr17	-	898	8	FSM	ENSMUSG00000061613.14	ENSMUST00000166526.9	923	8	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAGTATTGGTGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	31877726	31866062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31866330_31866976_31867070_31867156_31867291_31867640_31867740_31867818_31867869_31871475_31871543_31873952_31874041_31877626
ENSMUSG00000061615.3_0	chr13	+	466	1	FSM	ENSMUSG00000061615.3	ENSMUST00000078369.3	473	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCTTTCCATAAAATGAG	NA	NA	NA	NA	NA	NA	NA	NA	23935108	23935574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23935100_23935600
ENSMUSG00000061650.7_0	chr11	+	1905	2	FSM	ENSMUSG00000061650.7	ENSMUST00000081980.7	1920	2	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACACATGGTTTGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	59839042	59853027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_59839305_59851384
ENSMUSG00000061665.8_0	chr17	-	5285	17	ISM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	23863	0	23863	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43163417	43103841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258
ENSMUSG00000061665.8_1	chr17	-	5358	18	FSM	ENSMUSG00000061665.8	ENSMUST00000024709.9	5364	18	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTGTTTTTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	43187274	43103841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43156216_43156371_43163258_43163420_43187203
ENSMUSG00000061665.8_6	chr17	-	3149	16	FSM	ENSMUSG00000061665.8	ENSMUST00000233476.2	3157	16	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAGTAAAATAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	43187315	43105776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_43107261_43109485_43109550_43116050_43116227_43118804_43118907_43119621_43119735_43126835_43126979_43127317_43127484_43131485_43131549_43133239_43133277_43135364_43135470_43136727_43136823_43137171_43137251_43140808_43140997_43145055_43145177_43149592_43149694_43187203
ENSMUSG00000061666.7_0	chr11	-	2330	10	FSM	ENSMUSG00000061666.7	ENSMUST00000020804.8	2336	10	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTGATTCCAGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86964883	86924693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86926122_86926417_86926470_86928656_86928717_86932613_86932748_86935952_86936043_86936581_86936701_86947617_86947664_86950250_86950387_86954724_86954768_86964661
ENSMUSG00000061689.16_0	chr2	+	4852	13	FSM	ENSMUSG00000061689.16	ENST00000373913.7	4868	13	8	8	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGTAACGAGGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	156455609	156606274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156455779_156506718_156506908_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156589942_156590023_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_14	chr2	+	3289	11	FSM	ENSMUSG00000061689.16	ENSMUST00000070782.13	3303	11	8	6	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGGCAGCCGCGGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	156542549	156605093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156589942_156590023_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_18	chr2	+	1563	7	FSM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	0	32	0	-32	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156562964	156605012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156563008_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_24	chr2	+	3393	7	FSM	ENSMUSG00000061689.16	ENSMUST00000099145.6	3402	7	5	4	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACGAGGCCTCATGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	156563416	156606279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156564023_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_27	chr2	+	1511	6	ISM	ENSMUSG00000061689.16	ENSMUST00000109566.9	1595	7	24799	32	24352	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156587763	156605012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_4	chr2	+	4814	13	FSM	ENSMUSG00000061689.16	ENSMUST00000109567.10	4840	13	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTAACGAGGCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	156455644	156606275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156589942_156590023_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061689.16_6	chr2	+	4838	13	FSM	ENSMUSG00000061689.16	ENSMUST00000169464.9	4851	13	4	9	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTGTAACGAGGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	156455628	156606274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156455779_156506718_156506904_156542525_156543595_156546329_156546575_156547775_156547891_156548997_156549049_156552940_156553182_156587754_156588117_156590251_156590341_156590863_156591277_156602770_156602863_156603692_156603849_156604604
ENSMUSG00000061702.11_0	chr7	-	540	4	FSM	ENSMUSG00000061702.11	ENSMUST00000108405.2	550	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGAGAGGACCACATCGCC	NA	NA	NA	NA	NA	NA	NA	NA	25374515	25368676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25368776_25369910_25370061_25372849_25373086_25374460
ENSMUSG00000061702.11_1	chr7	-	471	3	ISM	ENSMUSG00000061702.11	ENSMUST00000108405.2	550	4	1450	4	1407	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACCACATCGCCCAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	25373065	25368670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_25368776_25369910_25370061_25372849
ENSMUSG00000061723.19_1	chr7	+	1067	17	FSM	ENSMUSG00000061723.19	ENSMUST00000078497.15	1067	17	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142057986_142058002_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_11	chr7	+	1052	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105954.10	1052	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_15	chr7	+	1028	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105955.8	1028	16	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142057986_142058002_142059252_142059268_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_24	chr7	+	1007	15	FSM	ENSMUSG00000061723.19	ENSMUST00000074187.13	1007	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052572	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142057784_142057803_142057986_142058002_142059024_142059037_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_5	chr7	+	1048	16	FSM	ENSMUSG00000061723.19	ENSMUST00000105953.10	1049	16	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142052573	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_142052637_142055356_142055392_142055565_142055580_142057784_142057803_142057986_142058002_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_87	chr7	+	991	15	ISM	ENSMUSG00000061723.19	ENSMUST00000105954.10	1052	16	2781	0	-21	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142055353	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142059252_142059268_142061486_142061526_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061723.19_90	chr7	+	966	15	ISM	ENSMUSG00000061723.19	ENSMUST00000105955.8	1028	16	2782	0	-20	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTTATGTGTTGTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	142055354	142069745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_142055392_142055565_142055580_142056476_142056495_142057784_142057803_142057986_142058002_142059252_142059268_142062071_142062091_142064400_142064447_142064993_142065111_142065201_142065280_142065772_142065887_142065992_142066103_142066268_142066360_142068062_142068104_142069512
ENSMUSG00000061731.10_0	chr15	-	7647	11	FSM	ENSMUSG00000061731.10	ENSMUST00000077273.9	7663	11	11	5	11	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTATGTGGGTCTGATTCC	NA	NA	NA	NA	NA	NA	NA	NA	53209544	52927438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_52932246_52936688_52936861_52939164_52939326_52946480_52946571_52951450_52951547_52953326_52953446_52955678_52955812_52965080_52965201_52969422_52969531_52970873_52970968_53207797
ENSMUSG00000061740.9_0	chr15	-	2752	10	FSM	ENSMUSG00000061740.9	ENSMUST00000023083.9	2769	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTATATCTGAGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	82264448	82254734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82255927_82256022_82256165_82256590_82256779_82256985_82257128_82257311_82257489_82257873_82258035_82258104_82258258_82258498_82258671_82259993_82260243_82264272
ENSMUSG00000061742.13_0	chr19	-	1324	8	FSM	ENSMUSG00000061742.13	ENST00000473690.5	1340	8	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAGTGAGTGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	6592670	6586773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6586971_6587146_6587256_6587667_6587883_6588446_6588563_6588705_6588830_6590358_6590528_6591089_6591194_6592380
ENSMUSG00000061742.13_1	chr19	-	1263	7	FSM	ENSMUSG00000061742.13	ENST00000377567.6	1277	7	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACAGTGAGTGGAGCCG	NA	NA	NA	NA	NA	NA	NA	NA	6592778	6586773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6586971_6587146_6587256_6587667_6587883_6588446_6588563_6588705_6588830_6591089_6591194_6592380
ENSMUSG00000061751.17_0	chr16	-	3193	16	FSM	ENSMUSG00000061751.17	ENSMUST00000114963.8	3207	16	10	4	10	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAGGTCAAAGGTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	33983639	33833505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33834585_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33936591_33936836_33983436
ENSMUSG00000061751.17_1	chr16	-	2653	16	FSM	ENSMUSG00000061751.17	ENSMUST00000232157.2	2690	16	34	3	-7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCATGTTTTAATGAGG	NA	NA	NA	NA	NA	NA	NA	NA	33916364	33833518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33834052_33834327_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33852787_33852839_33853876_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33873929_33874035_33875201_33875486_33916165
ENSMUSG00000061751.17_2	chr16	-	2964	15	FSM	ENSMUSG00000061751.17	ENST00000682363.1	2982	15	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAACTAATAATTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	33916322	33833572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33834582_33836761_33837001_33848307_33848480_33849009_33849196_33851923_33852002_33853784_33853970_33854825_33854913_33855205_33855276_33855422_33855527_33855862_33855930_33860248_33860380_33870199_33870293_33873929_33874032_33875201_33875486_33916165
ENSMUSG00000061751.17_5	chr16	-	4763	24	FSM	ENSMUSG00000061751.17	ENST00000684374.1	4783	24	17	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACGCTTACTGTGAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	34083209	33972633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33974212_33991641_33991745_33994754_33994898_33996098_33996201_33996636_33996828_33998665_33998778_34003027_34003121_34007784_34007875_34010037_34010108_34018762_34018873_34019554_34019622_34024230_34024350_34025517_34025701_34032527_34032651_34033160_34033277_34035384_34035500_34038165_34038316_34040425_34040645_34047396_34047517_34055614_34055782_34064140_34064337_34072594_34072770_34076521_34076731_34082997
ENSMUSG00000061755.11_0	chr5	-	10517	27	FSM	ENSMUSG00000061755.11	ENSMUST00000050556.11	10540	27	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	42001639	41944884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_41946293_41949139_41949281_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ENSMUSG00000061755.11_1	chr5	-	10371	26	FSM	ENSMUSG00000061755.11	ENSMUST00000202908.2	10399	26	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTGAGTGACAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	42001634	41944884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_41946293_41951569_41951724_41952224_41952307_41952412_41952463_41955380_41955427_41957114_41957150_41957232_41957309_41958102_41958180_41958504_41958584_41962494_41962575_41964031_41964105_41964514_41964586_41966046_41966108_41967397_41967442_41970464_41970550_41971473_41971539_41973550_41979504_41981311_41981385_41983805_41983945_41984451_41984564_41986095_41986263_41988787_41988938_41989553_41990169_41991000_41991192_41995382_41995508_42001274
ENSMUSG00000061758.14_0	chr6	+	1357	10	FSM	ENSMUSG00000061758.14	ENSMUST00000038383.14	1371	10	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCGTAGACATTTTCAACT	NA	NA	NA	NA	NA	NA	NA	NA	34361158	34373877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_34361343_34364606_34364775_34365710_34365828_34366989_34367068_34368951_34369075_34369323_34369431_34369849_34369932_34370992_34371077_34371661_34371745_34373546
ENSMUSG00000061759.16_0	chr10	+	2411	5	FSM	ENSMUSG00000061759.16	ENSMUST00000095893.11	2429	5	10	8	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGAGCTCTCACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4382476	4405133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646_4400810_4403471
ENSMUSG00000061759.16_5	chr10	+	5031	4	FSM	ENSMUSG00000061759.16	ENSMUST00000118544.8	5044	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAGAGCTCTCACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	4382518	4405133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4382712_4384827_4384934_4389491_4389737_4400646
ENSMUSG00000061778.11_0	chrX	-	2469	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112248.9	2487	15	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGGAAAAAAATCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	163763366	163719177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_163720081_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUSG00000061778.11_1	chrX	-	2391	14	ISM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	239	0	239	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTTCTGGTGCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	163763054	163719313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989
ENSMUSG00000061778.11_3	chrX	-	2472	15	FSM	ENSMUSG00000061778.11	ENSMUST00000112247.9	2479	15	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACGTTCTGGTGCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	163763288	163719315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_163720300_163722638_163722742_163726426_163726557_163727212_163727310_163727968_163728066_163730237_163730351_163731062_163731240_163734846_163734972_163739474_163739514_163741751_163741813_163745047_163745203_163746922_163747010_163747977_163748134_163762989_163763060_163763210
ENSMUSG00000061787.16_0	chr7	-	480	5	FSM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	6075	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGAAAACAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80995002	80992494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604_80994757_80994949
ENSMUSG00000061787.16_1	chr7	-	416	4	ISM	ENSMUSG00000061787.16	ENSMUST00000080813.5	494	5	257	14	257	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTGAAAACAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80994745	80992494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_80992598_80993482_80993549_80994058_80994165_80994604
ENSMUSG00000061802.7_0	chr18	-	2140	13	FSM	ENSMUSG00000061802.7	ENST00000672877.1	2158	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATGTTCTAAGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	7273266	7088433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_7088568_7111006_7111122_7127211_7127434_7129398_7129588_7181733_7181849_7211398_7211642_7214568_7214724_7216934_7217046_7217747_7217991_7222545_7222756_7223529_7223677_7265000_7265149_7273158
ENSMUSG00000061802.7_13	chr18	-	451	3	FSM	ENSMUSG00000061802.7	ENST00000576034.5	474	3	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTAAAGGTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	7294603	7265012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_7265149_7266882_7266982_7294387
ENSMUSG00000061815.12_0	chr1	+	1632	10	FSM	ENSMUSG00000061815.12	ENST00000344321.8	1651	10	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	939	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGCCGCCCCACCAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	74167017	74186923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_74167112_74168106_74168233_74168497_74168605_74168856_74169001_74170336_74170393_74171883_74172506_74173262_74173367_74180077_74180225_74185812_74185924_74186802
ENSMUSG00000061816.16_0	chr1	-	792	7	FSM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAAATTGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66974509	66963463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973676_66973702_66974434
ENSMUSG00000061816.16_1	chr1	-	1063	7	FSM	ENSMUSG00000061816.16	ENSMUST00000027151.12	1082	7	9	10	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAAATTGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66984293	66963463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973404_66973433_66983950
ENSMUSG00000061816.16_2	chr1	-	718	6	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	811	7	790	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAAATTGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66973702	66963463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344_66969489_66973676
ENSMUSG00000061816.16_4	chr1	-	693	5	ISM	ENSMUSG00000061816.16	ENSMUST00000119429.8	803	7	5024	7	5003	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCAAATTGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	66969489	66963463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_66963717_66964181_66964225_66965366_66965445_66965692_66965867_66969344
ENSMUSG00000061816.16_8	chr1	-	610	5	FSM	ENSMUSG00000061816.16	ENSMUST00000120415.8	621	5	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAATTTTGGAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	66974489	66965232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_66965445_66965692_66965867_66969344_66969489_66973676_66973702_66974434
ENSMUSG00000061838.8_0	chr6	-	3355	11	FSM	ENSMUSG00000061838.8	ENSMUST00000204224.3	3367	11	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTCAGTAGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95695772	95449992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95695669
ENSMUSG00000061838.8_1	chr6	-	3254	10	ISM	ENSMUSG00000061838.8	ENSMUST00000079847.8	2518	11	37281	-1130	37281	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTTGTCAGTAGTGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	95632582	95449992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438
ENSMUSG00000061838.8_4	chr6	-	2495	11	FSM	ENSMUSG00000061838.8	ENSMUST00000079847.8	2518	11	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAGCCTCACAGTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	95669845	95451127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_95452146_95474577_95474699_95543364_95543508_95546552_95546715_95556119_95556217_95563920_95564011_95565918_95566072_95571640_95571732_95572634_95572735_95632438_95632581_95669467
ENSMUSG00000061859.18_1	chr4	+	7396	45	FSM	ENSMUSG00000061859.18	ENSMUST00000238306.2	7416	45	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGTGGTGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98284041	98607834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98598020_98598097_98606145
ENSMUSG00000061859.18_10	chr4	+	4332	31	FSM	ENSMUSG00000061859.18	ENSMUST00000107029.8	4342	31	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACTTCCTCGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	98338813	98606592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98338911_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ENSMUSG00000061859.18_13	chr4	+	3746	18	FSM	ENSMUSG00000061859.18	ENSMUST00000102792.10	3755	18	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGATGTGGTGGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98434973	98607834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98435242_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98526927_98527000_98538604_98538723_98540640_98540796_98555812_98555897_98562430_98562625_98564409_98564558_98565477_98565565_98569350_98569460_98570280_98570319_98575569_98575693_98576362_98576468_98592231_98592339_98606145
ENSMUSG00000061859.18_3	chr4	+	4792	34	FSM	ENSMUSG00000061859.18	ENSMUST00000107034.8	4799	34	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTGAAGATGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	98284094	98562723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329302_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98538604_98538723_98540640_98540796_98562430
ENSMUSG00000061859.18_5	chr4	+	2100	15	FSM	ENSMUSG00000061859.18	ENSMUST00000107030.9	2104	15	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	98284128	98342940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98284162_98293615_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98342596
ENSMUSG00000061859.18_7	chr4	+	2066	14	ISM	ENSMUSG00000061859.18	ENSMUST00000107030.9	2104	15	9488	4	9488	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	98293616	98342940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98342596
ENSMUSG00000061859.18_8	chr4	+	4709	33	ISM	ENSMUSG00000061859.18	ENSMUST00000107034.8	4799	34	9532	12	9495	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGTGATGGGTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	98293623	98562715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_98293672_98293771_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329302_98329380_98331987_98332045_98344366_98344502_98353270_98353433_98357709_98357842_98379774_98379985_98383261_98383376_98385110_98385519_98393918_98394043_98401835_98402011_98407167_98407240_98408979_98409158_98411627_98411739_98423746_98423825_98427195_98427296_98457175_98457373_98480169_98480262_98499304_98499378_98511839_98511927_98538604_98538723_98540640_98540796_98562430
ENSMUSG00000061859.18_9	chr4	+	2013	13	ISM	ENSMUSG00000061859.18	ENSMUST00000107030.9	2104	15	9641	4	9641	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	98293769	98342940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_98293939_98297391_98297587_98299263_98299404_98301240_98301437_98304867_98304997_98312512_98312732_98314249_98314350_98317171_98317264_98319994_98320137_98325566_98325708_98329290_98329380_98331987_98332045_98342596
ENSMUSG00000061878.17_0	chr11	+	1914	6	FSM	ENSMUSG00000061878.17	ENSMUST00000106387.9	1957	6	26	17	26	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCAAATTCAAATAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	116422595	116427466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116422913_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_10	chr11	+	1530	4	FSM	ENSMUSG00000061878.17	ENSMUST00000141798.4	1537	4	0	7	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGATCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116425565	116427494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_2	chr11	+	1796	6	FSM	ENSMUSG00000061878.17	ENSMUST00000100201.10	1800	6	2	2	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGATCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116422738	116427494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116422913_116424795_116425000_116425677_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_3	chr11	+	1861	6	FSM	ENSMUSG00000061878.17	ENSMUST00000106386.8	1879	6	12	6	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGATCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116423281	116427494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116423518_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061878.17_6	chr11	+	2512	6	FSM	ENSMUSG00000061878.17	ENSMUST00000063446.13	2527	6	9	6	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGCTGATCCTATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	116423307	116427494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116424195_116424795_116425000_116425674_116425828_116425905_116426001_116426077_116426194_116426437
ENSMUSG00000061882.13_11	chr5	+	1211	5	FSM	ENSMUSG00000105875.2	ENST00000537566.5	1222	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGTCAGCGCAATGA	NA	NA	NA	NA	NA	NA	NA	NA	124072136	124092803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124072328_124074451_124074583_124089261_124089351_124089814_124089931_124092119
ENSMUSG00000061887.15_0	chr4	+	3180	18	FSM	ENSMUSG00000061887.15	ENSMUST00000030367.15	3195	18	14	1	14	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCCTGACATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	106768680	106906890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061887.15_1	chr4	+	1884	17	FSM	ENSMUSG00000061887.15	ENSMUST00000072753.13	1924	17	9	31	9	-31	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAGGCCAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106768738	106905733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061887.15_11	chr4	+	923	13	ISM	ENSMUSG00000061887.15	ENST00000417338.1	996	14	1056	7	10	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATCCCTAGGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106770109	106903578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895890_106895978_106897159_106897231_106903512
ENSMUSG00000061887.15_12	chr4	+	2747	17	ISM	ENSMUSG00000061887.15	ENST00000417664.7	2812	18	609	0	4	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCCTGACATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	106770103	106906890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061887.15_14	chr4	+	1078	15	FSM	ENSMUSG00000061887.15	ENST00000546860.2	1092	15	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGACAATGTAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	106770102	106904651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904520
ENSMUSG00000061887.15_22	chr4	+	1004	14	ISM	ENSMUSG00000061887.15	ENST00000546860.2	1092	15	306	11	306	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACGACAATGTAAGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	106770405	106904651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904520
ENSMUSG00000061887.15_4	chr4	+	1720	17	FSM	ENSMUSG00000061887.15	ENSMUST00000097934.10	1742	17	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGGAAAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	106768885	106905695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061887.15_6	chr4	+	989	14	FSM	ENSMUSG00000061887.15	ENST00000417338.1	996	14	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGATCCCTAGGTAAGCC	NA	NA	NA	NA	NA	NA	NA	NA	106769053	106903578	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106769110_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895890_106895978_106897159_106897231_106903512
ENSMUSG00000061887.15_9	chr4	+	2812	18	FSM	ENSMUSG00000061887.15	ENST00000417664.7	2812	18	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTTCCTGACATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	106769494	106906890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_106769556_106770099_106770173_106770401_106770464_106772841_106772927_106866875_106866966_106884413_106884495_106885389_106885450_106888058_106888126_106888211_106888289_106894132_106894198_106894798_106894848_106895418_106895455_106895922_106895978_106897159_106897231_106903512_106903592_106904438_106904468_106904560_106904663_106905220
ENSMUSG00000061894.16_0	chr4	-	5355	8	FSM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	128503882	128477339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997_128498506_128503786
ENSMUSG00000061894.16_1	chr4	-	5260	7	ISM	ENSMUSG00000061894.16	ENSMUST00000097877.9	5364	8	5385	0	-133	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAACATTTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	128498506	128477339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_128480638_128481808_128482238_128483244_128483935_128485265_128485351_128485608_128485686_128486127_128486300_128497997
ENSMUSG00000061894.16_2	chr4	-	1238	3	FSM	ENSMUSG00000061894.16	ENST00000373413.2	1250	3	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACATGGCATTTAACTA	NA	NA	NA	NA	NA	NA	NA	NA	128498371	128483242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_128483935_128486127_128486300_128497997
ENSMUSG00000061898.11_0	chr5	-	3311	5	FSM	ENSMUSG00000061898.11	ENSMUST00000049861.11	3335	5	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACCATGCTGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	143166468	143157947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165298_143166303
ENSMUSG00000061898.11_1	chr5	-	3463	5	FSM	ENSMUSG00000061898.11	ENSMUST00000165318.4	3480	5	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAACCATGCTGTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	143166520	143157947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143160814_143161790_143161887_143162219_143162347_143165240_143165398_143166303
ENSMUSG00000061904.13_15	chr10	-	1282	7	FSM	ENSMUSG00000061904.13	ENSMUST00000164505.2	1483	7	249	-48	-9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAAAAAAGATTTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	90959568	90952621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419
ENSMUSG00000061904.13_2	chr10	-	1591	8	FSM	ENSMUSG00000061904.13	ENSMUST00000076694.13	1612	8	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	10543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACACTGAATTGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	90959912	90952447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419_90959569_90959777
ENSMUSG00000061904.13_34	chr10	-	1336	8	FSM	ENSMUSG00000061904.13	ENSMUST00000170810.8	1341	8	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTATGAGTTTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	90959860	90952653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90952987_90953074_90953186_90953905_90954079_90954560_90954743_90955388_90955569_90958068_90958194_90959419_90959569_90959777
ENSMUSG00000061904.13_47	chr10	-	1145	6	FSM	ENSMUSG00000061904.13	ENST00000548847.1	1164	6	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAAGAGTTTCAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	90959621	90952700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90952987_90953905_90954079_90954560_90954743_90955388_90955569_90957783_90957906_90959419
ENSMUSG00000061904.13_59	chr10	-	720	5	FSM	ENSMUSG00000061904.13	ENST00000547720.1	734	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCCGAAGTGAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	90959551	90953969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90954079_90954560_90954743_90955393_90955569_90957783_90957906_90959419
ENSMUSG00000061904.13_66	chr10	-	539	4	FSM	ENSMUSG00000061904.13	ENST00000547534.5	546	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGAGAAAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	90959829	90955356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_90955569_90957783_90957906_90959419_90959569_90959773
ENSMUSG00000061904.13_67	chr10	-	476	3	ISM	ENSMUSG00000061904.13	ENST00000547534.5	546	4	268	7	-2	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTTTGAGAAAGATGTT	NA	NA	NA	NA	NA	NA	NA	NA	90959561	90955356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_90955569_90957783_90957906_90959419
ENSMUSG00000061911.16_0	chr12	+	6094	20	FSM	ENSMUSG00000061911.16	ENST00000648316.1	6115	20	12	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTCACATGTTAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	29825443	29972852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876864_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_17	chr12	+	5612	20	FSM	ENSMUSG00000061911.16	ENST00000647618.1	5627	20	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAAGGTGTTGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	29825445	29973172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29833853_29833888_29861371_29861734_29876864_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_23	chr12	+	6716	19	FSM	ENSMUSG00000061911.16	ENST00000648318.1	6735	19	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAAAGGTGTTGCCACG	NA	NA	NA	NA	NA	NA	NA	NA	29825449	29973172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876864_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964343_29969893
ENSMUSG00000061911.16_28	chr12	+	6506	21	FSM	ENSMUSG00000061911.16	ENST00000644820.1	6522	21	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACGAAGGATCTCTAATG	NA	NA	NA	NA	NA	NA	NA	NA	29825445	29973197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876864_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29904707_29904771_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_32	chr12	+	5719	20	FSM	ENSMUSG00000061911.16	ENST00000647755.1	5736	20	9	8	9	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTAATGGGTCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	29825445	29973207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876864_29877831_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29971067
ENSMUSG00000061911.16_6	chr12	+	5348	19	FSM	ENSMUSG00000061911.16	ENST00000648933.1	5359	19	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTGGAATCACAA	NA	NA	NA	NA	NA	NA	NA	NA	29825446	29973075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061911.16_8	chr12	+	6393	20	FSM	ENSMUSG00000061911.16	ENST00000650560.1	6412	20	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAACACATCTTACTCT	NA	NA	NA	NA	NA	NA	NA	NA	29825446	29973151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_29825593_29833619_29833675_29834200_29834313_29861371_29861734_29876867_29877837_29882286_29882422_29886348_29886440_29888038_29888147_29892393_29892609_29899243_29899495_29901532_29901770_29904231_29904354_29905213_29905283_29936121_29936185_29943360_29943445_29945091_29945314_29960765_29960858_29964232_29964337_29969893_29970038_29970339
ENSMUSG00000061950.18_0	chr17	+	3838	20	FSM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	5	7	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCATAAGATGGGAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	66090354	66148914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66090445_66090618_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061950.18_2	chr17	+	3776	20	FSM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGCATAAGATGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66090361	66148910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66090445_66090618_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061950.18_6	chr17	+	3744	19	ISM	ENSMUSG00000061950.18	ENSMUST00000073104.11	3850	20	268	12	257	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGCATAAGATGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	66090617	66148909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_66090664_66110154_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061950.18_7	chr17	+	3691	19	ISM	ENSMUSG00000061950.18	ENSMUST00000160664.8	3784	20	260	7	260	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGCATAAGATGGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	66090620	66148910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_66090664_66110205_66110291_66110854_66110962_66117532_66117676_66118237_66118385_66120452_66120561_66120682_66120749_66121300_66121460_66122917_66123046_66131254_66131785_66136369_66136543_66137991_66138088_66139948_66140135_66141977_66142140_66142977_66143079_66144678_66144800_66144884_66145020_66145812_66145955_66147851
ENSMUSG00000061979.9_0	chr5	-	2302	11	FSM	ENSMUSG00000061979.9	ENSMUST00000076228.3	2321	11	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTTTGACTTGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	134205598	134176896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134177846_134182962_134183049_134184578_134184753_134186429_134186518_134192462_134192645_134194177_134194263_134195503_134195556_134197050_134197118_134198056_134198186_134200685_134200816_134205238
ENSMUSG00000061981.15_0	chr11	+	2602	11	FSM	ENSMUSG00000061981.15	ENSMUST00000072289.12	2621	11	10	9	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCACACCTTTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	77928766	77951251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77928939_77940303_77940386_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061981.15_10	chr11	+	2548	11	FSM	ENSMUSG00000061981.15	ENSMUST00000073660.7	2568	11	11	9	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCACACCTTTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	77928820	77951251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061981.15_6	chr11	+	2681	12	FSM	ENSMUSG00000061981.15	ENSMUST00000100784.9	2699	12	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCACACCTTTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	77928778	77951251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061981.15_9	chr11	+	2709	13	FSM	ENSMUSG00000061981.15	ENST00000394906.6	2733	13	16	8	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCACACCTTTCATCGT	NA	NA	NA	NA	NA	NA	NA	NA	77928825	77951251	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77928939_77940303_77940386_77944188_77944280_77944446_77944522_77945610_77945702_77946582_77946707_77948087_77948207_77948313_77948428_77948527_77948648_77948725_77948941_77949332_77949517_77949770_77949921_77950020
ENSMUSG00000061983.8_0	chr10	-	576	6	FSM	ENSMUSG00000061983.8	ENSMUST00000218107.2	584	6	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTTTGCTGGTATA	NA	NA	NA	NA	NA	NA	NA	NA	23663166	23661081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891_23662943_23663053
ENSMUSG00000061983.8_3	chr10	-	492	5	FSM	ENSMUSG00000061983.8	ENSMUST00000220070.2	494	5	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTCTTGTATTTCT	NA	NA	NA	NA	NA	NA	NA	NA	23662985	23661095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_23661172_23661473_23661576_23661799_23661903_23662661_23662779_23662891
ENSMUSG00000062006.13_0	chr3	-	603	5	FSM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	14	7	11	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTACGCTTCCGTTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	130523972	130520486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523769
ENSMUSG00000062006.13_2	chr3	-	466	5	FSM	ENSMUSG00000062006.13	ENSMUST00000079085.11	480	5	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	6199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAGACTTGATCTACGCT	NA	NA	NA	NA	NA	NA	NA	NA	130524043	130520497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877_130522952_130523966
ENSMUSG00000062006.13_3	chr3	-	391	4	ISM	ENSMUSG00000062006.13	ENSMUST00000062601.14	624	5	1036	15	1033	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTTGATCTACGCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	130522950	130520494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_130520609_130522396_130522501_130522699_130522800_130522877
ENSMUSG00000062012.15_0	chr17	-	2094	6	FSM	ENSMUSG00000062012.15	ENSMUST00000115516.11	2104	6	6	4	6	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCCCTTGGCTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	23805200	23794821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23796086_23799085_23799207_23799744_23799837_23800030_23800245_23804411_23804549_23804934
ENSMUSG00000062014.14_0	chr14	-	4143	7	FSM	ENSMUSG00000062014.14	ENSMUST00000111817.8	4171	7	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGAAAGAACTTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	47059683	47045617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47049281_47051700_47051775_47052361_47052445_47053055_47053106_47053634_47053685_47054842_47054940_47059557
ENSMUSG00000062028.9_0	chr7	-	1798	3	FSM	ENSMUSG00000062028.9	ENSMUST00000205776.2	1835	3	15	22	15	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACCAACATCAA	NA	NA	NA	NA	NA	NA	NA	NA	24145092	24131368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24132872_24135251_24135372_24144917
ENSMUSG00000062031.14_0	chr7	+	2995	14	FSM	ENSMUSG00000062031.14	ENSMUST00000164580.3	3001	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTGAAGTCAGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	140521460	140527563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526706
ENSMUSG00000062031.14_1	chr7	+	2974	14	FSM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	1	6	1	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	140521494	140527571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140521557_140522197_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062031.14_10	chr7	+	1814	12	FSM	ENSMUSG00000062031.14	ENST00000409655.5	1827	12	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTCTTCCGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	140522287	140526762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140522479_140522898_140523110_140523175_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525868_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062031.14_4	chr7	+	2907	13	ISM	ENSMUSG00000062031.14	ENSMUST00000079403.11	2981	14	709	6	-64	2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCAGAGTGTGTGATGGA	NA	NA	NA	NA	NA	NA	NA	NA	140522202	140527571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525263_140525367_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062031.14_7	chr7	+	2109	12	FSM	ENSMUSG00000062031.14	ENST00000409479.5	2139	12	23	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCCCAGAAATTCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	140522289	140526755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140522479_140522898_140523110_140523189_140523626_140524557_140524678_140524863_140524996_140525150_140525441_140525538_140525676_140525792_140525927_140526019_140526116_140526243_140526342_140526414_140526627_140526701
ENSMUSG00000062040.15_0	chr7	-	3838	5	FSM	ENSMUSG00000062040.15	ENSMUST00000162592.8	3845	5	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAAGTATCATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29605995	29592762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605634
ENSMUSG00000062040.15_2	chr7	-	3134	5	FSM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAGGGACCATCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	29605521	29593148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324_29603485_29605478
ENSMUSG00000062040.15_3	chr7	-	3093	4	ISM	ENSMUSG00000062040.15	ENSMUST00000053521.15	3150	5	2045	6	2045	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGACCATCTTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	29603484	29593146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_29595852_29598176_29598304_29599662_29599764_29603324
ENSMUSG00000062054.8_0	chr12	+	1127	6	FSM	ENSMUSG00000062054.8	ENSMUST00000076813.8	1141	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTCACAATTTTATAA	NA	NA	NA	NA	NA	NA	NA	NA	21366398	21373815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770_21369933_21371334_21371457_21373289
ENSMUSG00000062054.8_1	chr12	+	1870	4	FSM	ENSMUSG00000062054.8	ENSMUST00000223345.2	1890	4	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCAGTTGTTGGTGAATA	NA	NA	NA	NA	NA	NA	NA	NA	21366429	21371354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_21366514_21367376_21367430_21367898_21368048_21369770
ENSMUSG00000062070.13_0	chrX	+	1803	11	FSM	ENSMUSG00000062070.13	ENSMUST00000081593.13	1825	11	10	12	10	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	13488	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAAATGGAAGTTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	105230715	105247293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_105230922_105235612_105235664_105237961_105238118_105238237_105238383_105240448_105240553_105241447_105241568_105243252_105243368_105243762_105243943_105246044_105246223_105246442_105246542_105246844
ENSMUSG00000062075.14_2	chr10	-	3501	12	FSM	ENSMUSG00000062075.14	ENSMUST00000057623.14	3531	12	8	22	8	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAACTTTAAAAAAAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	80754071	80737058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80742984_80743111_80743218_80743376_80745742_80745880_80753797
ENSMUSG00000062075.14_4	chr10	-	1596	9	FSM	ENSMUSG00000062075.14	ENSMUST00000105332.3	1643	9	47	0	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTAGTCCTTGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	80742199	80738631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80738735_80739045_80739157_80739283_80739404_80739764_80739873_80739948_80740223_80740386_80740608_80740719_80740846_80740914_80741086_80741837
ENSMUSG00000062077.15_0	chr5	+	1442	9	FSM	ENSMUSG00000062077.15	ENSMUST00000202769.2	1408	9	-112	78	14	-76	multi-exon	TRUE	canonical	NA	NA	NA	NA	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACCACCGCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	31273965	31294896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294826
ENSMUSG00000062077.15_5	chr5	+	1415	9	FSM	ENSMUSG00000062077.15	ENSMUST00000013771.15	1434	9	16	3	-6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTCCTCGGCTCCTTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	31274071	31294969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31274422_31288385_31288559_31289331_31289504_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294820
ENSMUSG00000062077.15_6	chr5	+	1289	9	ISM	ENSMUSG00000062077.15	ENST00000296098.4	1322	10	8	476	8	-76	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGACCACCGCGCCACC	NA	NA	NA	NA	NA	NA	NA	NA	31274187	31294896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_31274422_31288385_31288559_31289331_31289573_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294826
ENSMUSG00000062077.15_7	chr5	+	1311	10	FSM	ENSMUSG00000062077.15	ENST00000296098.4	1322	10	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTATTCAGGGTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	31274186	31295368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31274422_31288385_31288559_31289331_31289573_31291393_31291490_31293386_31293621_31294096_31294120_31294231_31294357_31294464_31294558_31294826_31294897_31295347
ENSMUSG00000062078.16_0	chr17	-	8523	8	FSM	ENSMUSG00000062078.16	ENSMUST00000233645.2	8547	8	17	7	-2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATGAGGAAAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	10538292	10421536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10428561_10432287_10432363_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062078.16_3	chr17	-	1041	8	FSM	ENSMUSG00000062078.16	ENST00000361195.6	1063	8	14	8	-10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCAATGATGACCTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	10537812	10428514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10428561_10432287_10432363_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062078.16_6	chr17	-	6705	7	FSM	ENSMUSG00000062078.16	ENSMUST00000042296.9	6737	7	17	15	-2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAACAAAAGAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	10538292	10429122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10434404_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062078.16_7	chr17	-	5419	7	FSM	ENSMUSG00000062078.16	ENSMUST00000233828.2	5428	7	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAACAAAAGAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	10538286	10429122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10433124_10435088_10435389_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062078.16_9	chr17	-	936	7	FSM	ENSMUSG00000062078.16	ENST00000424802.7	954	7	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACTTGCTGGATGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	10537789	10434364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_10434404_10435088_10435365_10436644_10436733_10457821_10457966_10492875_10492993_10501767_10501911_10537660
ENSMUSG00000062093.6_0	chr14	-	3212	1	FSM	ENSMUSG00000062093.6	ENSMUST00000228705.2	3220	1	2	6	2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTCCATAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	90136881	90133669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_90133700_90136900
ENSMUSG00000062098.12_0	chr2	+	4641	5	FSM	ENSMUSG00000062098.12	ENSMUST00000091556.12	4657	5	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATTTGCTTTTTTAGTA	NA	NA	NA	NA	NA	NA	NA	NA	138098497	138129339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_138098675_138120885_138121178_138121668_138121760_138122292_138122412_138125377
ENSMUSG00000062098.12_1	chr2	+	5157	5	FSM	ENSMUSG00000062098.12	ENST00000405977.5	5170	5	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTATTTTTGTTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	138098560	138129352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_138098675_138120319_138121178_138121668_138121760_138122292_138122412_138125377
ENSMUSG00000062101.13_0	chr17	-	1879	4	FSM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTGTGAAAGAAAATATTT	NA	NA	NA	NA	NA	NA	NA	NA	56252256	56245387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_56246994_56247928_56247990_56248185_56248313_56252171
ENSMUSG00000062101.13_1	chr17	-	1800	3	ISM	ENSMUSG00000062101.13	ENSMUST00000056147.14	1889	4	3948	0	3948	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAATATTTATGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	56248311	56245380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_56246994_56247928_56247990_56248185
ENSMUSG00000062110.15_0	chr5	-	3651	9	FSM	ENSMUSG00000062110.15	ENSMUST00000072857.13	3672	9	6	15	6	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAATGTAAAGTAACCTGC	NA	NA	NA	NA	NA	NA	NA	NA	74692404	74365491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_74367057_74372911_74373032_74385975_74386111_74397099_74397246_74558314_74558565_74623220_74623397_74642810_74642939_74680144_74680314_74691442
ENSMUSG00000062115.16_0	chr11	+	7122	5	FSM	ENSMUSG00000062115.16	ENSMUST00000171108.8	7125	5	3	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	60030910	60090021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60031197_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ENSMUSG00000062115.16_1	chr11	+	6914	5	FSM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	5	2	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	60066709	60090021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_60066788_60075921_60081449_60084764_60084859_60088614_60088665_60088856
ENSMUSG00000062115.16_2	chr11	+	6838	4	ISM	ENSMUSG00000062115.16	ENSMUST00000102688.2	6921	5	9215	2	9215	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGCGGCCTGTGGATG	NA	NA	NA	NA	NA	NA	NA	NA	60075919	60090021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_60081449_60084764_60084859_60088614_60088665_60088856
ENSMUSG00000062116.11_0	chr7	-	2035	5	FSM	ENSMUSG00000062116.11	ENSMUST00000056246.8	2042	5	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTAATGACTCTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	7124482	7117690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7119200_7119611_7119711_7120784_7120912_7122370_7122410_7124221
ENSMUSG00000062127.12_0	chr3	-	4772	5	ISM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	13967	7	13967	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAACTGTCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	104946300	104909239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180
ENSMUSG00000062127.12_1	chr3	-	4827	6	FSM	ENSMUSG00000062127.12	ENSMUST00000098763.7	4834	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAACTGTCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	104960267	104909239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960215
ENSMUSG00000062127.12_2	chr3	-	4917	6	FSM	ENSMUSG00000062127.12	ENSMUST00000077548.12	4946	6	20	9	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATAACTGTCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	104960442	104909239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104913445_104915263_104915372_104918508_104918740_104939968_104940077_104946180_104946304_104960300
ENSMUSG00000062157.7_0	chr4	+	1285	6	FSM	ENSMUSG00000062157.7	ENST00000374421.7	1315	6	23	7	23	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGAACAGGAGGACGAG	NA	NA	NA	NA	NA	NA	NA	NA	135417852	135433015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_135417957_135426100_135426283_135428538_135428682_135431020_135431181_135431479_135431611_135432450
ENSMUSG00000062168.13_1	chrX	-	2451	16	FSM	ENSMUSG00000062168.13	ENSMUST00000071204.12	2483	16	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATCAAACTGTAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	159502945	159406098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_159406700_159407559_159407645_159408672_159408837_159414850_159414958_159416189_159416333_159418003_159418190_159421154_159421302_159424846_159424997_159426263_159426301_159429626_159429794_159455573_159455621_159459628_159459744_159468165_159468336_159474491_159474553_159476482_159476611_159502802
ENSMUSG00000062168.13_2	chrX	-	2044	14	FSM	ENSMUSG00000062168.13	ENST00000349874.9	2053	14	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGGTGAATACTAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	159476595	159406139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_159406700_159407559_159407639_159408672_159408837_159414850_159414958_159416189_159416333_159421154_159421302_159424846_159424997_159426263_159426301_159429626_159429794_159455573_159455621_159459628_159459744_159468165_159468305_159474476_159474553_159476482
ENSMUSG00000062169.14_0	chr1	+	499	4	FSM	ENSMUSG00000062169.14	ENSMUST00000193907.6	531	4	23	9	23	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTACACACTGCACAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	180972280	180993804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180972467_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062169.14_1	chr1	+	3243	5	FSM	ENSMUSG00000062169.14	ENSMUST00000134115.8	3268	5	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAATTAATCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	180978507	180996546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180978627_180981299_180981369_180983423_180983537_180989639_180989781_180993745
ENSMUSG00000062175.14_0	chr2	+	1386	3	FSM	ENSMUSG00000062175.14	ENST00000373874.6	1401	3	8	7	-8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGAAGCACAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	156681918	156696059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156682068_156686075_156686302_156695048
ENSMUSG00000062175.14_1	chr2	+	2885	3	FSM	ENSMUSG00000062175.14	ENSMUST00000081335.13	2900	3	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCAAACTGAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	156681932	156697481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156682159_156686075_156686302_156695048
ENSMUSG00000062175.14_2	chr2	+	2672	4	FSM	ENSMUSG00000062175.14	ENSMUST00000073352.10	2690	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCAAACTGAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	156682028	156697481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156682159_156686075_156686302_156695048_156695149_156695265
ENSMUSG00000062190.13_0	chr6	+	2484	9	FSM	ENSMUSG00000062190.13	ENSMUST00000050077.15	2509	9	14	11	14	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCCAGAAAGATCTATCC	NA	NA	NA	NA	NA	NA	NA	NA	57679634	57715456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_57680249_57689972_57690091_57699481_57699690_57700473_57700622_57701530_57701678_57703401_57703585_57709180_57709358_57711001_57711075_57714640
ENSMUSG00000062198.6_0	chr12	-	1091	8	FSM	ENSMUSG00000062198.6	ENSMUST00000021406.6	1105	8	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGTTTTGTTTGCTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	55126888	55092452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55092729_55095671_55095763_55100085_55100193_55104026_55104138_55106241_55106364_55107839_55107979_55109772_55109895_55126765
ENSMUSG00000062198.6_1	chr12	-	232	2	FSM	ENSMUSG00000062198.6	ENST00000556705.5	249	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTACCATATTTTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	55107958	55104024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55104138_55107839
ENSMUSG00000062200.15_0	chr3	-	9210	7	FSM	ENSMUSG00000062200.15	ENSMUST00000233255.2	9253	7	34	9	34	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGCAGGCAATCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	64678044	64592473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_64599064_64600404_64600529_64614444_64614676_64623181_64624052_64626747_64627040_64632212_64632978_64677706
ENSMUSG00000062202.15_0	chr17	-	7041	11	FSM	ENSMUSG00000062202.15	ENSMUST00000168787.8	7058	11	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCCGAGTTTGTGCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	30795448	30434500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_30439545_30447773_30447853_30493827_30493936_30518504_30518695_30553196_30553307_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127_30749340_30795119
ENSMUSG00000062203.16_0	chr16	-	3701	15	FSM	ENSMUSG00000062203.16	ENSMUST00000167571.8	3716	15	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATGATGTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	11072126	11037162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056961_11058529_11058572_11058668_11058705_11071506
ENSMUSG00000062203.16_5	chr16	-	2887	15	FSM	ENSMUSG00000062203.16	ENSMUST00000080030.14	2898	15	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTTGTAAGTAAAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	11072062	11037915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11038744_11040448_11040618_11041075_11041166_11042283_11042458_11045978_11046060_11047072_11047167_11048373_11048515_11048700_11048856_11050395_11050577_11053229_11053308_11055394_11055429_11056735_11056964_11058529_11058572_11058668_11058705_11071506
ENSMUSG00000062210.14_0	chr18	+	2376	3	FSM	ENSMUSG00000062210.14	ENSMUST00000179937.2	2385	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAATAACCACAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50112595	50226287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_50112694_50223266_50223590_50224332
ENSMUSG00000062210.14_1	chr18	+	1898	2	FSM	ENSMUSG00000062210.14	ENSMUST00000148159.3	1921	2	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACGACTCGGGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	50186362	50224840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_50186687_50223266
ENSMUSG00000062232.15_0	chr3	-	6666	23	FSM	ENSMUSG00000062232.15	ENST00000644902.1	6683	23	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAATTGTGCATGCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	79080371	78969816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981538_78981768_78986312_78986520_78988368_78988593_78990505_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79080214
ENSMUSG00000062232.15_19	chr3	-	6912	23	FSM	ENSMUSG00000062232.15	ENST00000264431.8	6925	23	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTTCATGAATTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	79052618	78969825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_78971869_78973879_78974180_78976195_78976756_78977296_78977523_78981614_78981768_78986312_78986520_78988368_78988593_78990473_78990630_78990715_78990928_78993051_78993436_78995151_78995393_78995951_78996110_78999118_78999366_78999803_78999913_79000006_79000211_79000301_79000410_79001591_79001757_79002119_79002273_79005526_79005686_79006400_79006538_79011269_79011448_79019477_79019610_79052162
ENSMUSG00000062234.15_0	chr5	-	4436	28	FSM	ENSMUSG00000062234.15	ENSMUST00000046603.15	4453	28	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTCTGGCTTGTAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	108777589	108717280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730151_108730535_108731016_108732097_108732245_108733206_108733401_108739010_108739091_108739515_108739634_108740063_108740259_108744620_108744755_108745726_108745850_108746632_108746782_108747319_108747370_108750709_108750834_108752181_108752267_108754245_108754359_108754747_108754884_108757256_108757347_108761378_108761505_108764774_108764918_108771125_108771241_108772048_108772109_108772895_108772958_108777366
ENSMUSG00000062234.15_2	chr5	-	1219	8	FSM	ENSMUSG00000062234.15	ENST00000618573.4	1231	8	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCCTGTGATGGCTATG	NA	NA	NA	NA	NA	NA	NA	NA	108777499	108717723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108717823_108718005_108718183_108719254_108719401_108719739_108719953_108724428_108724546_108728772_108728896_108729979_108730213_108777388
ENSMUSG00000062248.6_0	chr13	+	675	3	FSM	ENSMUSG00000062248.6	ENSMUST00000075853.6	692	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1947	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCACCATTGTTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	51799278	51804690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_51799508_51803620_51803749_51804372
ENSMUSG00000062270.15_0	chr9	-	1860	13	FSM	ENSMUSG00000062270.15	ENSMUST00000085248.12	1882	13	9	13	9	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTCAAGAGATTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	89996759	89973730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89985707_89985825_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062270.15_1	chr9	-	1804	12	FSM	ENSMUSG00000062270.15	ENSMUST00000169860.8	1824	12	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGAGATTGTGTGGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	89996815	89973725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_89974456_89975786_89975872_89976407_89976581_89977173_89977263_89978555_89978658_89979424_89979514_89979916_89979943_89982495_89982577_89984352_89984440_89989287_89989356_89992178_89992226_89996588
ENSMUSG00000062300.15_0	chr7	-	2725	9	FSM	ENSMUSG00000062300.15	ENSMUST00000075447.14	2735	9	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGAAGTGAGTGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	19483488	19450568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19451713_19453120_19453208_19453357_19453422_19455277_19455432_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUSG00000062300.15_1	chr7	-	1942	6	FSM	ENSMUSG00000062300.15	ENSMUST00000108450.5	1955	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCGGGGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	19483449	19458089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_19458795_19463962_19464112_19464536_19464655_19466839_19467137_19471936_19472300_19483139
ENSMUSG00000062312.6_0	chr11	+	3145	21	FSM	ENSMUSG00000062312.6	ENST00000445658.6	3164	21	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGGTCACATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98303276	98327487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98303562_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_14	chr11	+	4992	27	FSM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	12	8	12	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACACAAGCATTTGTAATT	NA	NA	NA	NA	NA	NA	NA	NA	98303307	98328534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062312.6_24	chr11	+	3616	26	FSM	ENSMUSG00000062312.6	ENST00000584450.5	3632	26	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGGTCACATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98303383	98327487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98303562_98310914_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98327138
ENSMUSG00000062312.6_41	chr11	+	3686	26	ISM	ENSMUSG00000062312.6	ENSMUST00000058295.6	5012	27	7624	1055	7545	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAGGTCACATGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	98310919	98327487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_98311067_98311690_98311908_98312880_98313016_98313349_98313419_98313580_98313697_98313820_98313963_98315565_98315686_98315922_98316050_98317728_98317803_98317885_98317977_98318081_98318282_98318739_98318873_98318961_98319053_98319649_98319811_98322542_98322591_98323736_98323876_98323956_98324080_98324224_98324324_98324717_98324904_98325039_98325196_98325325_98325402_98325627_98325775_98326100_98326199_98326350_98326540_98326754_98327008_98327138
ENSMUSG00000062328.9_0	chr18	+	1312	9	FSM	ENSMUSG00000062328.9	ENSMUST00000237431.2	1326	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	4613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTAAATATGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75131636	75136445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75131917_75132048_75132285_75133519_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_4	chr18	+	766	7	FSM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	2	7	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTAAATATGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75133549	75136445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_75133615_75134261_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062328.9_8	chr18	+	697	6	ISM	ENSMUSG00000062328.9	ENSMUST00000079716.6	775	7	718	7	718	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGTAAATATGACTGTC	NA	NA	NA	NA	NA	NA	NA	NA	75134265	75136445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_75134315_75134420_75134462_75134736_75134872_75135094_75135194_75135731_75135924_75136264
ENSMUSG00000062345.11_0	chr1	+	1962	8	FSM	ENSMUSG00000062345.11	ENSMUST00000009356.11	1970	8	2	6	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGGATTTTTGTTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	107439154	107453322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_107439209_107443193_107443371_107447381_107447502_107449876_107450006_107450421_107450540_107450794_107450938_107451526_107451692_107452266
ENSMUSG00000062345.11_1	chr1	+	1987	8	FSM	ENSMUSG00000062345.11	ENSMUST00000064916.9	1996	8	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTATTTTGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107439227	107453314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_107439315_107443193_107443371_107447381_107447502_107449876_107450006_107450421_107450540_107450794_107450938_107451526_107451692_107452266
ENSMUSG00000062345.11_3	chr1	+	1895	7	ISM	ENSMUSG00000062345.11	ENSMUST00000064916.9	1996	8	3972	8	3972	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTATTTTGGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107443198	107453314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_107443371_107447381_107447502_107449876_107450006_107450421_107450540_107450794_107450938_107451526_107451692_107452266
ENSMUSG00000062352.16_0	chr12	-	1908	7	FSM	ENSMUSG00000062352.16	ENSMUST00000076260.12	1921	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATCTACAATGCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	21336280	21319814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21336106
ENSMUSG00000062352.16_4	chr12	-	1686	7	FSM	ENSMUSG00000062352.16	ENSMUST00000173729.8	1701	7	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTATAAATCACTGCATTA	NA	NA	NA	NA	NA	NA	NA	NA	21336087	21320097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21320959_21321419_21321570_21322056_21322150_21324766_21324904_21326820_21326900_21329400_21329532_21335852
ENSMUSG00000062353.7_0	chr5	+	489	1	FSM	ENSMUSG00000062353.7	ENSMUST00000118533.2	438	1	-22	-29	-22	29	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGCTTAAGTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3286408	3286897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_3286400_3286900
ENSMUSG00000062365.5_0	chr6	+	821	1	FSM	ENSMUSG00000062365.5	ENSMUST00000071458.5	858	1	28	9	28	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATAAGGAGTTTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	127210752	127211573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_127210800_127211600
ENSMUSG00000062373.9_0	chr15	-	3734	7	FSM	ENSMUSG00000062373.9	ENSMUST00000072113.6	3747	7	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGACGCGGCTTCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	58695371	58654122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_58656860_58658958_58659065_58661234_58661278_58662003_58662059_58666190_58666259_58669049_58669095_58694691
ENSMUSG00000062376.8_0	chr19	+	2151	5	FSM	ENSMUSG00000062376.8	ENSMUST00000074912.8	2176	5	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACGCTATAACAAAATTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	46678359	46691811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46678525_46687994_46688058_46688176_46688221_46689213_46689235_46689953
ENSMUSG00000062380.5_0	chr8	+	1850	4	FSM	ENSMUSG00000062380.5	ENSMUST00000071134.4	1868	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGCCTGGTATTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	124138174	124148748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124138402_124144831_124144941_124145678_124145790_124147345
ENSMUSG00000062382.10_0	chr13	+	889	1	FSM	ENSMUSG00000062382.10	ENSMUST00000222435.2	938	1	15	34	15	-34	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGCAAAAAAAACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74554542	74555431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_74554500_74555400
ENSMUSG00000062397.9_0	chr15	-	4403	4	FSM	ENSMUSG00000062397.9	ENSMUST00000078976.9	4417	4	10	4	10	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	5271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	37007636	36997274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37007371
ENSMUSG00000062397.9_1	chr15	-	608	2	FSM	ENSMUSG00000062397.9	ENST00000519744.5	622	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGCGGGTTAAAGAATG	NA	NA	NA	NA	NA	NA	NA	NA	37004059	37000689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37001168_37003929
ENSMUSG00000062397.9_2	chr15	-	646	5	FSM	ENSMUSG00000062397.9	ENST00000521272.5	669	5	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTGTTGGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	37007601	37001100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37001168_37002082_37002191_37003929_37004067_37006915_37007020_37007371
ENSMUSG00000062421.14_0	chr11	+	2231	5	FSM	ENSMUSG00000062421.14	ENSMUST00000057921.10	2242	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGACATGGTCATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	103857568	103876156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_103857654_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUSG00000062421.14_3	chr11	+	2631	5	FSM	ENSMUSG00000062421.14	ENSMUST00000063347.12	2660	5	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGACATGGTCATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	103857718	103876156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_103858204_103859904_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUSG00000062421.14_6	chr11	+	2148	4	ISM	ENSMUSG00000062421.14	ENSMUST00000063347.12	2660	5	2206	7	2206	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGACATGGTCATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	103859902	103876156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_103860072_103863778_103863890_103872519_103872645_103874413
ENSMUSG00000062444.16_0	chr7	-	3100	25	FSM	ENSMUSG00000062444.16	ENST00000666973.1	3116	25	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTCAGCACTGTTACCC	NA	NA	NA	NA	NA	NA	NA	NA	81143359	81110399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_81110550_81112651_81112750_81112988_81113074_81113431_81113661_81113838_81113946_81114189_81114251_81114378_81114560_81114887_81115006_81115404_81115514_81115918_81116038_81117182_81117370_81121569_81121747_81122747_81122858_81123134_81123268_81123604_81123668_81126027_81126100_81126488_81126544_81126693_81126978_81127063_81127247_81127335_81127403_81127653_81127815_81134173_81134270_81134583_81134659_81134781_81134858_81143255
ENSMUSG00000062456.5_0	chr19	-	680	1	FSM	ENSMUSG00000062456.5	ENSMUST00000078034.5	714	1	6	28	6	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATATTGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32443972	32443292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_32443300_32444000
ENSMUSG00000062470.11_0	chr9	+	2326	3	FSM	ENSMUSG00000062470.11	ENSMUST00000136376.2	2349	3	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACCAAGAGAAAATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	20518790	20528558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20518927_20525889_20527204_20527682
ENSMUSG00000062510.13_0	chr1	+	4865	6	FSM	ENSMUSG00000062510.13	ENSMUST00000078259.8	4879	6	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAGAAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	190795241	190818671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_190795470_190797371_190797451_190802186_190802318_190803374_190803430_190812685_190812754_190814367
ENSMUSG00000062519.14_0	chr6	+	2883	6	FSM	ENSMUSG00000062519.14	ENSMUST00000079881.11	2906	6	20	3	-11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCACAACAGGGATCATCA	NA	NA	NA	NA	NA	NA	NA	NA	47812617	47844619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47812855_47817185_47817582_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUSG00000062519.14_1	chr6	+	8289	5	FSM	ENSMUSG00000062519.14	ENSMUST00000114598.3	8328	5	30	9	30	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATCAATCAACTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	47812658	47850462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47812855_47835862_47835990_47836352_47836467_47840037_47840152_47842724
ENSMUSG00000062526.5_0	chr18	-	2478	11	FSM	ENSMUSG00000062526.5	ENSMUST00000073054.5	2494	11	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGGAGTTTGGATCTT	NA	NA	NA	NA	NA	NA	NA	NA	67378891	67358119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67358956_67359853_67359995_67360667_67360791_67360874_67360950_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420_67370804_67377034_67377119_67378452
ENSMUSG00000062526.5_5	chr18	-	1225	7	FSM	ENSMUSG00000062526.5	ENST00000309976.13	1244	7	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTAAATGTCATGGACAC	NA	NA	NA	NA	NA	NA	NA	NA	67370660	67358508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67358956_67359853_67359995_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062526.5_9	chr18	-	889	7	FSM	ENSMUSG00000062526.5	ENST00000557286.2	911	7	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGGTAACGTAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	67370654	67359859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67359995_67360667_67360791_67361083_67361193_67362000_67362076_67362745_67362850_67366671_67366781_67370420
ENSMUSG00000062580.10_0	chr1	-	7273	6	FSM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	5	2	5	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTGGCCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	135241511	135222952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508_135237609_135241431
ENSMUSG00000062580.10_1	chr1	-	7194	5	ISM	ENSMUSG00000062580.10	ENSMUST00000081104.10	7280	6	3907	2	3907	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGCTTTGGCCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	135237609	135222952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_135229742_135232167_135232279_135233826_135233956_135236872_135236937_135237508
ENSMUSG00000062590.14_19	chr1	+	811	6	FSM	ENSMUSG00000094638.2	ENST00000440107.6	832	6	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	627	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCCATGAGAGACGGGG	NA	NA	NA	NA	NA	NA	NA	NA	86087732	86104637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535
ENSMUSG00000062590.14_20	chr1	+	1699	16	FSM	ENSMUSG00000062590.14	ENST00000436339.6	1720	16	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGATGAAGTAAGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	86087724	86140816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771
ENSMUSG00000062590.14_25	chr1	+	1715	16	FSM	ENSMUSG00000062590.14	ENST00000682002.1	1725	16	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTACACGAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	86087724	86172391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_30	chr1	+	1813	17	FSM	ENSMUSG00000062590.14	ENST00000682100.1	1824	17	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTACACGAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	86087725	86172391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_35	chr1	+	1668	15	FSM	ENSMUSG00000062590.14	ENST00000683553.1	1677	15	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTACACGAGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	86087723	86172391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287
ENSMUSG00000062590.14_38	chr1	+	2017	18	FSM	ENSMUSG00000062590.14	ENST00000682334.1	2030	18	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATGCATTAATGCATAAT	NA	NA	NA	NA	NA	NA	NA	NA	86087721	86180176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86087846_86090386_86090558_86092417_86092574_86097631_86097743_86101278_86101437_86104535_86104635_86113826_86113862_86116598_86116711_86118731_86118825_86121998_86122090_86124040_86124165_86125963_86126104_86127559_86127637_86130211_86130287_86135674_86135766_86140771_86140828_86172287_86172393_86179977
ENSMUSG00000062604.12_0	chr5	-	6477	15	FSM	ENSMUSG00000062604.12	ENSMUST00000088392.9	6491	15	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGGCTTAAGAGCACATT	NA	NA	NA	NA	NA	NA	NA	NA	23821524	23708267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23712719_23718949_23719043_23719631_23719702_23723413_23723522_23723616_23723718_23729145_23729614_23730493_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23821324
ENSMUSG00000062604.12_11	chr5	-	1031	10	FSM	ENSMUSG00000062604.12	ENST00000523408.1	1043	10	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACCAGCCGGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	23880922	23730570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717_23880773_23880855
ENSMUSG00000062604.12_12	chr5	-	963	9	ISM	ENSMUSG00000062604.12	ENST00000523408.1	1043	10	155	8	155	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACCAGCCGGAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	23880771	23730570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_23730744_23731787_23731814_23732894_23733061_23745372_23745480_23750520_23750609_23751977_23752066_23753452_23753562_23770111_23770264_23880717
ENSMUSG00000062609.15_0	chr16	+	5693	4	FSM	ENSMUSG00000062609.15	ENSMUST00000113862.8	5705	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGCTGTGGTTTTGATA	NA	NA	NA	NA	NA	NA	NA	NA	95058423	95101065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_95059311_95059711_95059816_95092669_95092756_95096449
ENSMUSG00000062619.7_0	chr17	+	741	1	FSM	ENSMUSG00000062619.7	ENSMUST00000071430.7	762	1	13	8	13	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCATTTCTAACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47083573	47084314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47083600_47084300
ENSMUSG00000062627.10_0	chr4	-	7411	20	FSM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTAGCAATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	94867328	94830276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453_94863530_94867240
ENSMUSG00000062627.10_3	chr4	-	7324	19	ISM	ENSMUSG00000062627.10	ENSMUST00000075872.4	7420	20	3807	0	3807	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTATTAGCAATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	94863530	94830276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_94835361_94836338_94836397_94836565_94836672_94839162_94839296_94840410_94840600_94841099_94841175_94841734_94841786_94842108_94842164_94845286_94845376_94847149_94847228_94848564_94848669_94849939_94850071_94853365_94854109_94856106_94856206_94857216_94857296_94858748_94858773_94858860_94858939_94861154_94861226_94863453
ENSMUSG00000062646.13_0	chr2	+	4767	24	FSM	ENSMUSG00000062646.13	ENSMUST00000135074.2	4780	24	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	120235254	120292174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120235541_120236746_120236810_120241915_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288628_120290296
ENSMUSG00000062646.13_2	chr2	+	2734	22	FSM	ENSMUSG00000062646.13	ENST00000318010.12	2748	22	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATGTGACATTCCTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	120241920	120291832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120242025_120249838_120249967_120252505_120252686_120254179_120254226_120258210_120258278_120259281_120259379_120261035_120261217_120261421_120261576_120264102_120264339_120265743_120265871_120267102_120267183_120269780_120269925_120271984_120272082_120274618_120274721_120276779_120277024_120278868_120278934_120281301_120281379_120283073_120283149_120286473_120286588_120287688_120287802_120288523_120288609_120291614
ENSMUSG00000062647.17_0	chr2	+	906	8	FSM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACTGCCTTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	26800776	26803323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26800843_26801017_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062647.17_12	chr2	+	836	7	ISM	ENSMUSG00000062647.17	ENSMUST00000102898.5	914	8	246	7	246	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACTGCCTTTGGTTA	NA	NA	NA	NA	NA	NA	NA	NA	26801021	26803323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_26801139_26801433_26801584_26802030_26802172_26802377_26802458_26802682_26802814_26802999_26803070_26803176
ENSMUSG00000062661.7_0	chr2	+	4642	8	FSM	ENSMUSG00000062661.7	ENSMUST00000000199.8	4653	8	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCCTGTGTGAGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	31135844	31186000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31136255_31160623_31160649_31170677_31170817_31172320_31172400_31174158_31174248_31174673_31174752_31177298_31177416_31182295
ENSMUSG00000062683.12_0	chr15	-	712	5	FSM	ENSMUSG00000062683.12	ENSMUST00000185641.7	731	5	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	4310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAAGATGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102579553	102571308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145_102576215_102579452
ENSMUSG00000062683.12_1	chr15	-	626	5	FSM	ENSMUSG00000062683.12	ENST00000394349.9	636	5	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAAGATGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102579483	102571308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102571564_102573488_102573683_102574197_102574271_102576141_102576215_102579452
ENSMUSG00000062683.12_2	chr15	-	607	4	FSM	ENSMUSG00000062683.12	ENSMUST00000075630.10	441	4	-26	-140	-26	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAAGATGTTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	102576210	102571308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102571564_102573488_102573683_102574197_102574291_102576145
ENSMUSG00000062683.12_3	chr15	-	563	4	FSM	ENSMUSG00000062683.12	ENST00000429083.1	425	4	-2	-136	-2	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATTAATAAGATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	102576186	102571312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102571564_102573488_102573683_102574197_102574271_102576141
ENSMUSG00000062683.12_4	chr15	-	381	3	ISM	ENSMUSG00000062683.12	ENST00000429083.1	425	4	1914	1	1914	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGCTGTCTCCACTTCC	NA	NA	NA	NA	NA	NA	NA	NA	102574270	102571449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102571564_102573488_102573683_102574197
ENSMUSG00000062691.11_0	chr17	+	596	5	FSM	ENSMUSG00000062691.11	ENSMUST00000180077.7	602	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79223928	79227729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79223955_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062691.11_1	chr17	+	742	5	FSM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79223950	79227729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79224123_79225785_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062691.11_2	chr17	+	561	4	ISM	ENSMUSG00000062691.11	ENSMUST00000063817.7	753	5	1849	6	1849	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATAACGTGTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	79225794	79227729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_79225902_79226484_79226530_79227187_79227273_79227405
ENSMUSG00000062694.8_0	chr6	+	1150	2	FSM	ENSMUSG00000062694.8	ENSMUST00000075477.8	1157	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGCACCAGGGATCACTA	NA	NA	NA	NA	NA	NA	NA	NA	112436465	112449826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_112436887_112449097
ENSMUSG00000062713.9_0	chr16	+	3981	11	FSM	ENSMUSG00000062713.9	ENSMUST00000072182.9	3999	11	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTATGGTTTATTTATG	NA	NA	NA	NA	NA	NA	NA	NA	93885804	93927888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_93886850_93895158_93895242_93898025_93898116_93905525_93905635_93907116_93907203_93910142_93910343_93915781_93915889_93922006_93922155_93923461_93923631_93924023_93924436_93926356
ENSMUSG00000062727.5_0	chr13	+	467	1	FSM	ENSMUSG00000062727.5	ENSMUST00000110455.4	476	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGAATTCACCTTCGA	NA	NA	NA	NA	NA	NA	NA	NA	22220043	22220510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22220000_22220500
ENSMUSG00000062729.13_0	chr1	-	1806	13	FSM	ENSMUSG00000062729.13	ENSMUST00000073120.11	1821	13	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTGGTTTGCTCTTTACT	NA	NA	NA	NA	NA	NA	NA	NA	171108751	171104570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171105266_171105378_171105454_171105574_171105707_171105769_171106696_171106888_171107003_171107149_171107442_171107576_171107713_171107830_171107961_171108097_171108247_171108343_171108446
ENSMUSG00000062729.13_5	chr1	-	648	6	FSM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTGACAAGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	171108618	171104638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171104773_171104858_171104902_171105019_171105170_171107961_171108097_171108247_171108343_171108527
ENSMUSG00000062729.13_6	chr1	-	558	5	ISM	ENSMUSG00000062729.13	ENST00000544598.5	665	6	283	9	283	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCTGACAAGCCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	171108343	171104638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_171104773_171104858_171104902_171105019_171105170_171107961_171108097_171108247
ENSMUSG00000062743.10_0	chr17	+	2882	4	FSM	ENSMUSG00000062743.10	ENSMUST00000162659.2	2917	4	27	8	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGACCCGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	21604036	21619519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21604283_21612722_21612814_21613437_21613565_21617101
ENSMUSG00000062753.15_0	chr17	-	855	5	FSM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACAAGGGGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	27784724	27782547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784633
ENSMUSG00000062753.15_1	chr17	-	766	4	ISM	ENSMUSG00000062753.15	ENSMUST00000154473.9	862	5	1004	1	914	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACAAGGGGAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	27783726	27782547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535
ENSMUSG00000062753.15_2	chr17	-	858	5	FSM	ENSMUSG00000062753.15	ENSMUST00000232276.2	860	5	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	27784640	27782744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784349
ENSMUSG00000062753.15_3	chr17	-	989	5	FSM	ENSMUSG00000062753.15	ENSMUST00000145183.3	992	5	1	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTGCCCTCCTTGGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	27784640	27782744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783535_27783725_27784218
ENSMUSG00000062753.15_5	chr17	-	563	5	FSM	ENSMUSG00000062753.15	ENSMUST00000231753.2	563	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTGCCCTCCTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	27784691	27782746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27782991_27783122_27783229_27783358_27783385_27783595_27783725_27784633
ENSMUSG00000062761.8_0	chr5	+	3281	14	FSM	ENSMUSG00000062761.8	ENSMUST00000076264.8	3299	14	13	5	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAAGTCTCTGGTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	31609791	31639093	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31609922_31610498_31610558_31622789_31622978_31623575_31623681_31623935_31624020_31624665_31624791_31625497_31625585_31627701_31627801_31628340_31628509_31630113_31630306_31630796_31630899_31633016_31633080_31634124_31634224_31637313
ENSMUSG00000062762.18_0	chr9	-	2204	11	FSM	ENSMUSG00000062762.18	ENSMUST00000238932.2	2220	11	16	0	16	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATGTATAATGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	36708673	36690454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36691566_36693636_36693712_36694028_36694141_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535_36704646_36708508
ENSMUSG00000062762.18_4	chr9	-	1474	9	FSM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGGAAAGAAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36704636	36690898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075_36701222_36704535
ENSMUSG00000062762.18_5	chr9	-	1374	8	ISM	ENSMUSG00000062762.18	ENST00000527235.6	1487	9	3421	6	3421	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAGGAAAGAAAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	36701222	36690898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_36691566_36693636_36693712_36695763_36695876_36696828_36696949_36697231_36697357_36697778_36697846_36699488_36699550_36701075
ENSMUSG00000062778.13_0	chr3	+	996	7	FSM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCTAATGCCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	106028952	106039329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106029011_106035465_106035591_106035766_106035891_106036150_106036337_106037934_106038055_106038140_106038283_106039088
ENSMUSG00000062778.13_8	chr3	+	931	6	ISM	ENSMUSG00000062778.13	ENST00000451398.6	1004	7	6520	8	6520	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACCTAATGCCATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	106035472	106039329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_106035591_106035766_106035891_106036150_106036337_106037934_106038055_106038140_106038283_106039088
ENSMUSG00000062794.9_0	chr9	-	3554	5	FSM	ENSMUSG00000062794.9	ENSMUST00000086281.5	3574	5	0	20	0	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACAAATAATTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	22171191	22158745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22161837_22162823_22162928_22165150_22165244_22169340_22169468_22171052
ENSMUSG00000062797.15_0	chr7	-	2206	5	FSM	ENSMUSG00000062797.15	ENSMUST00000153470.9	2224	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCAGTTATGTACCTTG	NA	NA	NA	NA	NA	NA	NA	NA	89590401	89566743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89568216_89569280_89569400_89572771_89572924_89584934_89585173_89590176
ENSMUSG00000062797.15_1	chr7	-	805	4	FSM	ENSMUSG00000062797.15	ENSMUST00000207309.2	835	4	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACCATTACATGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	89590312	89567903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_89568216_89569280_89569400_89584934_89585173_89590176
ENSMUSG00000062822.9_0	chr13	+	2536	13	FSM	ENSMUSG00000062822.9	ENSMUST00000026519.10	2565	13	22	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGAACTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	119599325	119622646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119599656_119602546_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUSG00000062822.9_1	chr13	+	2617	14	FSM	ENSMUSG00000062822.9	ENSMUST00000225186.2	2627	14	0	10	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGAACTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	119599307	119622646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119599656_119601100_119601227_119602609_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUSG00000062822.9_2	chr13	+	3392	14	FSM	ENSMUSG00000062822.9	ENSMUST00000224312.2	3406	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTGAACTATTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	119599326	119622646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_119599656_119601100_119601227_119601815_119602841_119603402_119603493_119606050_119606698_119608674_119608777_119610368_119610493_119611368_119611461_119612472_119612543_119614219_119614391_119615963_119616059_119617470_119617567_119620988_119621030_119622262
ENSMUSG00000062825.16_0	chr11	-	1933	6	FSM	ENSMUSG00000062825.16	ENSMUST00000071555.13	1952	6	10	9	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	64806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGACCATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120239358	120236524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794_120238924_120239250
ENSMUSG00000062825.16_2	chr11	-	1817	5	FSM	ENSMUSG00000062825.16	ENSMUST00000106215.11	1827	5	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAACTGACCATTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	120238915	120236524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_120237360_120237462_120237645_120237736_120238176_120238461_120238702_120238794
ENSMUSG00000062861.9_0	chr7	+	4423	7	FSM	ENSMUSG00000062861.9	ENSMUST00000081022.9	4447	7	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCAGGCATGGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6386308	6399905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6386601_6387173_6387266_6392431_6392559_6392752_6392849_6393398_6393560_6395180_6395296_6396365
ENSMUSG00000062866.17_0	chr10	-	2400	12	FSM	ENSMUSG00000062866.17	ENST00000367584.8	2419	12	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGGCATTTGGTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	13350086	13089534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13349799
ENSMUSG00000062866.17_15	chr10	-	1834	12	FSM	ENSMUSG00000062866.17	ENST00000305766.10	1843	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGCCATTGCACTGA	NA	NA	NA	NA	NA	NA	NA	NA	13264565	13089940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_13090018_13100527_13100605_13108282_13108421_13109893_13109956_13115653_13115710_13121154_13121312_13122745_13122940_13129085_13129624_13137509_13137669_13142716_13142798_13167538_13167707_13264438
ENSMUSG00000062867.14_0	chr9	+	1840	14	FSM	ENSMUSG00000062867.14	ENSMUST00000081111.14	1858	14	10	8	10	3	multi-exon	TRUE	canonical	NA	NA	NA	NA	3627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACTGATCTTTGAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	108437494	108442775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108438981_108439057_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062867.14_12	chr9	+	1653	14	FSM	ENSMUSG00000062867.14	ENST00000678724.1	1673	14	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGACAACTGA	NA	NA	NA	NA	NA	NA	NA	NA	108437666	108442763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108437831_108438232_108438282_108438795_108438898_108439372_108439580_108439990_108440079_108440334_108440535_108440619_108440711_108440794_108440891_108441111_108441184_108441833_108441978_108442064_108442210_108442300_108442445_108442525_108442610_108442696
ENSMUSG00000062901.4_0	chr16	+	8156	8	FSM	ENSMUSG00000062901.4	ENSMUST00000023509.5	8172	8	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAATCTGATGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	19916299	19947963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_19916422_19920741_19920805_19925412_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939049_19941655
ENSMUSG00000062901.4_3	chr16	+	1668	6	FSM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCATCCAGCTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	19925484	19955211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859_19939092_19955177
ENSMUSG00000062901.4_5	chr16	+	1619	5	ISM	ENSMUSG00000062901.4	ENST00000476808.1	1686	6	26	16127	26	-8880	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCTGATTATTTACTGG	NA	NA	NA	NA	NA	NA	NA	NA	19925499	19939091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_19926394_19933310_19933496_19934633_19934753_19936617_19936807_19938859
ENSMUSG00000062906.13_0	chr15	-	2396	20	FSM	ENSMUSG00000062906.13	ENSMUST00000082197.12	2412	20	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAACACATCTCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	89012895	89007517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89007683_89007767_89007928_89008021_89008205_89008377_89008457_89008734_89008792_89008915_89009008_89009514_89009600_89009699_89009953_89010028_89010094_89010177_89010285_89010414_89010505_89010580_89010641_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387_89012523_89012592
ENSMUSG00000062906.13_12	chr15	-	944	10	FSM	ENSMUSG00000062906.13	ENST00000349505.4	957	10	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGTCAGTATGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	89012513	89010034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89010094_89010177_89010285_89010414_89010505_89010843_89010910_89011071_89011199_89011352_89011422_89011588_89011694_89011796_89011895_89012124_89012222_89012387
ENSMUSG00000062908.13_0	chr3	-	2031	12	FSM	ENSMUSG00000062908.13	ENSMUST00000072697.13	2047	12	10	6	10	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	3951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTTTTCTCTGACTC	NA	NA	NA	NA	NA	NA	NA	NA	153650259	153627999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644292_153644533_153644604_153644706_153644805_153647519_153647608_153650032
ENSMUSG00000062908.13_9	chr3	-	1234	10	FSM	ENSMUSG00000062908.13	ENST00000370834.9	1248	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACTATTGAACGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	153644798	153628563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_153628640_153631301_153631551_153635167_153635264_153635853_153635995_153638663_153638773_153641931_153642063_153643339_153643421_153644190_153644380_153644533_153644604_153644706
ENSMUSG00000062929.9_0	chr12	-	3042	4	FSM	ENSMUSG00000062929.9	ENST00000672517.1	3077	4	31	4	31	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTGCATTTAAAACAGTGA	NA	NA	NA	NA	NA	NA	NA	NA	54908929	54905576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54908718
ENSMUSG00000062929.9_6	chr12	-	2911	4	FSM	ENSMUSG00000062929.9	ENSMUST00000078124.8	2940	4	9	20	9	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	3240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAATACATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54909653	54905621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_54908023_54908121_54908199_54908310_54908619_54909528
ENSMUSG00000062931.16_0	chr10	-	2007	4	FSM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	15	13	15	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTAAATGAAAATGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	82077092	82060696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82062428_82063364_82063426_82063632_82063760_82077004
ENSMUSG00000062931.16_1	chr10	-	1918	3	ISM	ENSMUSG00000062931.16	ENSMUST00000041264.15	2035	4	13347	15	13347	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGTAAATGAAAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	82063760	82060698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_82062428_82063364_82063426_82063632
ENSMUSG00000062933.8_0	chr9	+	476	1	FSM	ENSMUSG00000062933.8	ENSMUST00000075723.7	490	1	9	5	9	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTAATTTCTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	96777719	96778195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96777700_96778200
ENSMUSG00000062937.8_0	chr4	+	2784	8	FSM	ENSMUSG00000062937.8	ENSMUST00000058030.10	2797	8	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATCAGATTATACTTG	NA	NA	NA	NA	NA	NA	NA	NA	89055370	89099317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_89055762_89066425_89066513_89070245_89070305_89074682_89074851_89089364_89089468_89090381_89090622_89095039_89095163_89097704
ENSMUSG00000062939.12_0	chr1	+	2462	22	FSM	ENSMUSG00000062939.12	ENST00000392320.7	2483	22	7	14	7	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	1041	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATATAACAGAGGACTC	NA	NA	NA	NA	NA	NA	NA	NA	52050945	52146317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_52051071_52052948_52053094_52104473_52104573_52107904_52107998_52111019_52111099_52113835_52113922_52115691_52115844_52117652_52117812_52118899_52118993_52121676_52121737_52122122_52122231_52123237_52123283_52135943_52136028_52137545_52137645_52139482_52139619_52141010_52141061_52141275_52141371_52141639_52141777_52142006_52142199_52144364_52144432_52144826_52144936_52146068
ENSMUSG00000062944.5_0	chr7	-	3562	1	FSM	ENSMUSG00000062944.5	ENSMUST00000078816.5	3574	1	7	5	7	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	169	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTTGGTTCTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	127837196	127833634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127833600_127837200
ENSMUSG00000062949.14_0	chrX	-	5865	29	ISM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	82258	3	82258	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATACAATGGGTATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59366914	59268655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793
ENSMUSG00000062949.14_1	chrX	-	6013	30	FSM	ENSMUSG00000062949.14	ENSMUST00000101527.3	6044	30	28	3	28	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATACAATGGGTATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59449144	59268655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366914_59448995
ENSMUSG00000062949.14_4	chrX	-	6031	30	NNC	ENSMUSG00000062949.14	novel	6039	30	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATACAATGGGTATTCGA	NA	NA	NA	NA	NA	NA	NA	NA	59636301	59268655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chrX_-_59271154_59274507_59274613_59281916_59282071_59283829_59283934_59286132_59286199_59288121_59288258_59290523_59290652_59293248_59293309_59305520_59305667_59307011_59307115_59312095_59312271_59315093_59315358_59321967_59322150_59322736_59322841_59324153_59324228_59325391_59325464_59326016_59326169_59326927_59327090_59335253_59335452_59335929_59336081_59337279_59337362_59337678_59337744_59338966_59339018_59340548_59340653_59342320_59342450_59349584_59349693_59352556_59352638_59355075_59355166_59366793_59366915_59636135
ENSMUSG00000062963.11_0	chr1	-	998	7	FSM	ENSMUSG00000062963.11	ENSMUST00000080001.9	1007	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGTTCTCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	171122589	171116136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206_171122401_171122493
ENSMUSG00000062963.11_2	chr1	-	902	6	FSM	ENSMUSG00000062963.11	ENSMUST00000111302.4	914	6	160	-148	160	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGTGGTTCTCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	171122400	171116136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171116545_171116743_171116835_171117090_171117168_171117456_171117521_171117721_171117790_171122206
ENSMUSG00000062980.16_0	chr6	+	5671	22	FSM	ENSMUSG00000062980.16	ENSMUST00000115383.9	5690	22	17	2	17	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATTTGTGCTCAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	21985931	22256401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21987059_22016901_22017086_22051291_22051399_22059875_22059952_22085028_22085162_22088687_22088857_22119460_22119604_22120982_22121056_22122255_22122424_22123550_22123656_22132227_22132386_22135845_22135917_22138658_22138710_22143942_22144130_22145517_22145687_22215510_22215629_22222402_22222540_22233443_22233665_22233906_22234009_22234629_22234718_22237594_22237742_22254464
ENSMUSG00000062980.16_3	chr6	+	555	2	FSM	ENSMUSG00000062980.16	ENST00000340646.9	584	2	21	8	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGTAAGTCTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	21986015	21987052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21986131_21986612
ENSMUSG00000062981.6_1	chr10	-	614	5	ISM	ENSMUSG00000062981.6	ENSMUST00000075829.3	666	6	1415	4	1415	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCCAAGTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	95336374	95316671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244
ENSMUSG00000062981.6_3	chr10	-	659	6	FSM	ENSMUSG00000062981.6	ENSMUST00000218893.2	661	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATCCAAGTGTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	95337802	95316671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_95316840_95326107_95326275_95329492_95329578_95332685_95332750_95336244_95336385_95337767
ENSMUSG00000062991.10_0	chr8	-	5826	13	FSM	ENSMUSG00000062991.10	ENSMUST00000207470.3	5846	13	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACTAAGCAATAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	32499557	32304587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32321232_32321257_32327697_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ENSMUSG00000062991.10_11	chr8	-	1615	7	FSM	ENSMUSG00000062991.10	ENSMUST00000238826.2	1625	7	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGACCAAAGTTCGCATGT	NA	NA	NA	NA	NA	NA	NA	NA	32499569	32327205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ENSMUSG00000062991.10_2	chr8	-	2685	12	FSM	ENSMUSG00000062991.10	ENSMUST00000208205.3	2698	12	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGCTGTCCCTCTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	32499526	32307682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32328288_32328357_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ENSMUSG00000062991.10_3	chr8	-	2383	13	FSM	ENSMUSG00000062991.10	ENSMUST00000208488.2	2403	13	15	5	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTAAACAATTTATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	32499464	32307991	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32323180_32323259_32327697_32327757_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458214_32499037
ENSMUSG00000062991.10_5	chr8	-	1722	10	FSM	ENSMUSG00000062991.10	ENST00000519301.6	1742	10	13	7	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAACCTAAATAAACACA	NA	NA	NA	NA	NA	NA	NA	NA	32458203	32308059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32308711_32311269_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32321232_32321257_32327697_32327757_32339337_32339468_32448539_32448662_32458035
ENSMUSG00000062991.10_6	chr8	-	1696	11	FSM	ENSMUSG00000062991.10	ENST00000652588.1	1717	11	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAAAGAGCAGGAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	32499245	32311056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_32311477_32312254_32312386_32314471_32314599_32316280_32316384_32328288_32328357_32339337_32339468_32437011_32437063_32439944_32439996_32448539_32448662_32458035_32458317_32499033
ENSMUSG00000062995.13_0	chr6	-	2064	14	FSM	ENSMUSG00000062995.13	ENSMUST00000038403.12	2075	14	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTATTCACTCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8778476	8630529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8778071
ENSMUSG00000062995.13_1	chr6	-	1866	15	FSM	ENSMUSG00000062995.13	ENSMUST00000115520.8	1876	15	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTATTCACTCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8778432	8630529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8630798_8643972_8644243_8653496_8653536_8653629_8653693_8656361_8656409_8658219_8658315_8670693_8670793_8672297_8672424_8737016_8737216_8742254_8742379_8749694_8749768_8754588_8754752_8758365_8758459_8775783_8775931_8778372
ENSMUSG00000062997.7_0	chr2	-	936	4	FSM	ENSMUSG00000062997.7	ENSMUST00000080861.6	946	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	23384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCTTCATGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	38895626	38891591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38891778_38894118_38894201_38894743_38894881_38895095
ENSMUSG00000063011.8_0	chr17	-	2132	16	FSM	ENSMUSG00000063011.8	ENSMUST00000238120.2	2165	16	32	1	-31	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25973319	25967587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105
ENSMUSG00000063011.8_1	chr17	-	2061	16	FSM	ENSMUSG00000063011.8	ENSMUST00000075884.8	2114	16	52	1	52	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTCCTGTAGTGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	25973236	25967587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105
ENSMUSG00000063011.8_12	chr17	-	2044	17	FSM	ENSMUSG00000063011.8	ENSMUST00000237359.2	2044	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGTCCTGTAGTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	25973352	25967588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972037_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ENSMUSG00000063011.8_29	chr17	-	2054	17	FSM	ENSMUSG00000063011.8	ENSMUST00000236137.2	2054	17	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTCCTGTAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	25973351	25967589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25967805_25967874_25968062_25968422_25968518_25968799_25968928_25969004_25969148_25969232_25969389_25969648_25969828_25970052_25970153_25970226_25970318_25970543_25970738_25970829_25970960_25971262_25971349_25971915_25972049_25972351_25972399_25972747_25972792_25973105_25973197_25973316
ENSMUSG00000063015.13_0	chr5	-	2789	7	FSM	ENSMUSG00000063015.13	ENSMUST00000058550.15	2804	7	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTTGGTTTGTGTAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	93354345	93329797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_93331280_93335446_93335678_93335938_93336080_93337005_93337081_93337422_93337552_93350163_93350322_93353772
ENSMUSG00000063018.7_0	chrX	-	864	2	FSM	ENSMUSG00000063018.7	ENSMUST00000154346.2	874	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAAAAGTATATGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	7287318	7278059	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7278772_7287166
ENSMUSG00000063018.7_2	chrX	-	873	4	FSM	ENSMUSG00000063018.7	ENSMUST00000150671.2	885	4	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAAAGTAAAGTTACTT	NA	NA	NA	NA	NA	NA	NA	NA	7311380	7278354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_7278772_7290368_7290524_7295745_7295914_7311247
ENSMUSG00000063019.6_0	chr2	+	1100	3	FSM	ENSMUSG00000063019.6	ENSMUST00000081202.6	1107	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGCCTGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	157209513	157238676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157209561_157220968_157221175_157237829
ENSMUSG00000063019.6_1	chr2	+	599	3	FSM	ENSMUSG00000063019.6	ENST00000397152.7	602	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGGGAGATTCTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	157215778	157238142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157215859_157220968_157221175_157237829
ENSMUSG00000063019.6_5	chr2	+	1048	2	ISM	ENSMUSG00000063019.6	ENST00000397152.7	602	3	5198	-534	5198	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTGAGCCTGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	157220973	157238676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_157221175_157237829
ENSMUSG00000063047.10_0	chr7	-	1906	6	FSM	ENSMUSG00000063047.10	ENSMUST00000205874.2	1907	6	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCATCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	27678564	27658560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27660056_27671047_27671147_27673143_27673271_27674177_27674231_27676176_27676259_27678514
ENSMUSG00000063047.10_1	chr7	-	1846	5	ISM	ENSMUSG00000063047.10	ENSMUST00000205874.2	1907	6	2316	1	-1455	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCATCATGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	27676248	27658560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_27660056_27671047_27671147_27673143_27673271_27674177_27674231_27676176
ENSMUSG00000063047.10_9	chr7	-	3920	6	FSM	ENSMUSG00000063047.10	ENSMUST00000206685.2	3940	6	20	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGTAAAAACTATAA	NA	NA	NA	NA	NA	NA	NA	NA	27678552	27660785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27664295_27671047_27671147_27673143_27673271_27674177_27674231_27676164_27676259_27678514
ENSMUSG00000063049.5_0	chr8	-	2797	2	FSM	ENSMUSG00000063049.5	ENSMUST00000080353.3	2812	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAATGTCCTCCATCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	48128178	48120212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_48122372_48127540
ENSMUSG00000063052.10_0	chr3	+	4119	15	FSM	ENSMUSG00000063052.10	ENSMUST00000072080.10	4142	15	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAAAAATCAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	157742310	157774113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_157742514_157746077_157746260_157747222_157747297_157749197_157749328_157754037_157754162_157757333_157757477_157758400_157758574_157760217_157760306_157760422_157760469_157761354_157761464_157764306_157764415_157766874_157766986_157768285_157768364_157769320_157769507_157771749
ENSMUSG00000063063.13_0	chr6	-	2013	10	FSM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCAATGTCCTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	77120923	76859043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790_76958884_77091912_77092066_77120845
ENSMUSG00000063063.13_1	chr6	-	1937	9	ISM	ENSMUSG00000063063.13	ENST00000629316.2	2021	10	28859	5	28859	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCAATGTCCTGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	77092067	76859043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_76859821_76896862_76896969_76909328_76909511_76919190_76919305_76931705_76931858_76950689_76950891_76957668_76957826_76958790_76958884_77091912
ENSMUSG00000063065.14_0	chr7	+	1783	9	FSM	ENSMUSG00000063065.14	ENSMUST00000057669.16	1800	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGAGCCTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126358781	126364983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063065.14_11	chr7	+	1699	8	FSM	ENSMUSG00000063065.14	ENSMUST00000091328.4	1716	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGAGCCTGCCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	126359777	126364983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363405_126363538_126363705_126363816_126363894_126364050_126364411
ENSMUSG00000063065.14_2	chr7	+	998	7	FSM	ENSMUSG00000063065.14	ENST00000395202.5	1005	7	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAACAGACACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126358828	126364015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362569_126362687_126362912_126363028_126363705_126363816_126363894
ENSMUSG00000063065.14_4	chr7	+	951	7	FSM	ENSMUSG00000063065.14	ENST00000395200.5	960	7	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAACAGACACCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	126358890	126364015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126358991_126359902_126360086_126362206_126362397_126362912_126363028_126363405_126363538_126363705_126363816_126363894
ENSMUSG00000063077.16_0	chr4	-	10416	50	FSM	ENSMUSG00000063077.16	ENSMUST00000238956.2	10434	50	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACCATGCGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	149392137	149260781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149290142_149290344_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149345616_149345659_149346592_149346736_149347155_149347235_149348071_149348148_149349801_149349820_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ENSMUSG00000063077.16_1	chr4	-	10211	49	FSM	ENSMUSG00000063077.16	ENSMUST00000060537.13	10233	49	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACACCATGCGTGCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	149392133	149260781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149265268_149265940_149266060_149266265_149266459_149266724_149266875_149268765_149268888_149270559_149270632_149272047_149272288_149272455_149272602_149274179_149274242_149275605_149275740_149277029_149277145_149282888_149282995_149283714_149283800_149286964_149287032_149288642_149288752_149291174_149291231_149292305_149292425_149294498_149294590_149297752_149297916_149298079_149298210_149298535_149298622_149299363_149299483_149304998_149305248_149306683_149306822_149307686_149307866_149309546_149309696_149310719_149310814_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342539_149345616_149345659_149346592_149346736_149347155_149347235_149348071_149348148_149349801_149349820_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ENSMUSG00000063077.16_19	chr4	-	6972	21	FSM	ENSMUSG00000063077.16	ENSMUST00000030806.6	6991	21	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGCCTTGGCATGATC	NA	NA	NA	NA	NA	NA	NA	NA	149392067	149318196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149322941_149329794_149329868_149329998_149330180_149330793_149330878_149331684_149331792_149332261_149332342_149336197_149336274_149338128_149338209_149342326_149342461_149346592_149346736_149347155_149347235_149348071_149348148_149350708_149350775_149351662_149351741_149354318_149354431_149355173_149355353_149358237_149358304_149359372_149359553_149361303_149361381_149375758_149375934_149391885
ENSMUSG00000063087.16_0	chr18	-	2273	3	FSM	ENSMUSG00000063087.16	ENSMUST00000074702.10	2286	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATGTAATACTTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	5592378	5565658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_5567591_5583011_5583134_5592159
ENSMUSG00000063108.16_0	chr9	-	11245	10	FSM	ENSMUSG00000063108.16	ENSMUST00000159569.9	11276	10	30	1	30	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAATGCCTTTTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	20371426	20339745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20349957_20350817_20350901_20351487_20351572_20352624_20352752_20353475_20353562_20355554_20355664_20356189_20356282_20357041_20357194_20370842_20370958_20371240
ENSMUSG00000063142.16_1	chr14	-	3482	29	FSM	ENSMUSG00000063142.16	ENST00000404771.8	3505	29	14	9	14	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGACCAGAACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23853357	23349953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23350111_23356792_23356822_23359107_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23475634_23475809_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_2	chr14	-	3453	28	FSM	ENSMUSG00000063142.16	ENST00000457953.6	3476	28	14	9	14	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGACCAGAACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23853357	23349953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23350111_23359107_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23475634_23475809_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_28	chr14	-	5539	26	FSM	ENSMUSG00000063142.16	ENST00000354353.9	5557	26	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATTTTATTCTGTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23853362	23356689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436416_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_3	chr14	-	3282	27	FSM	ENSMUSG00000063142.16	ENST00000638306.1	3302	27	11	9	11	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGACCAGAACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23853360	23349953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23350111_23359107_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576603_23576696_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_47	chr14	-	5186	26	FSM	ENSMUSG00000063142.16	ENST00000640141.1	5205	26	10	9	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATAAACCATATATA	NA	NA	NA	NA	NA	NA	NA	NA	23853361	23357056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486008_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_6	chr14	-	3312	28	FSM	ENSMUSG00000063142.16	ENST00000638203.1	3331	28	10	9	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGACCAGAACTATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	23853361	23349953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23350111_23356792_23356822_23359107_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576603_23576696_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_60	chr14	-	5252	27	FSM	ENSMUSG00000063142.16	ENST00000640969.1	5269	27	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATAATTATATATATAA	NA	NA	NA	NA	NA	NA	NA	NA	23853359	23357066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23359333_23361716_23361836_23364190_23364386_23380907_23381039_23387012_23387127_23413868_23414062_23417506_23417732_23423205_23423330_23436327_23436422_23440988_23441076_23486017_23486095_23492060_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063142.16_73	chr14	-	2399	8	FSM	ENSMUSG00000063142.16	ENST00000640632.1	2423	8	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTTAAAAGGTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	23561593	23492074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23492148_23501666_23501736_23513168_23513279_23544606_23544763_23551192_23551263_23555241_23555321_23558104_23558211_23559857
ENSMUSG00000063142.16_76	chr14	-	1602	14	FSM	ENSMUSG00000063142.16	ENST00000639120.1	1615	14	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCTGTTGATATTAAACT	NA	NA	NA	NA	NA	NA	NA	NA	23853364	23535956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_23536193_23544606_23544763_23551192_23551263_23555241_23555325_23558104_23558211_23559857_23559969_23576792_23576885_23578417_23578589_23580286_23580363_23593098_23593175_23640708_23640821_23641655_23641750_23700192_23700255_23853207
ENSMUSG00000063145.11_0	chr2	+	1448	12	FSM	ENSMUSG00000063145.11	ENSMUST00000074963.9	1468	12	12	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTAATTAATGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	69477563	69497907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69477687_69479365_69479449_69483125_69483192_69484406_69484457_69484589_69484718_69485842_69485979_69487240_69487337_69491379_69491443_69493369_69493505_69495369_69495454_69497284_69497309_69497447
ENSMUSG00000063160.13_0	chr7	+	2750	10	FSM	ENSMUSG00000063160.13	ENSMUST00000079258.7	2760	10	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTGGCCACTGGGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	26958152	26981559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26958387_26961592_26961678_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_1	chr7	+	2138	9	FSM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGGAGGCCCACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	26958301	26981181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26958387_26964300_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063160.13_7	chr7	+	2053	8	ISM	ENSMUSG00000063160.13	ENST00000598779.5	2152	9	6005	8	6005	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGGAGGCCCACTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	26964300	26981181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_26964441_26965979_26966055_26966151_26966227_26968203_26968345_26973379_26973570_26976051_26976358_26978928_26979052_26980178
ENSMUSG00000063172.14_0	chr4	+	601	6	FSM	ENSMUSG00000063172.14	ENSMUST00000106749.8	607	6	0	6	0	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGATTCCATTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	107111099	107137129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107111160_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUSG00000063172.14_3	chr4	+	599	6	FSM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTGTATCACTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	107111123	107137118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107111193_107119663_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUSG00000063172.14_5	chr4	+	533	5	ISM	ENSMUSG00000063172.14	ENSMUST00000046558.8	608	6	8546	0	8546	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTCTGATTCCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	107119667	107137125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_107119777_107130809_107130917_107132419_107132489_107135123_107135168_107136921
ENSMUSG00000063179.14_0	chr7	+	1113	6	FSM	ENSMUSG00000063179.14	ENSMUST00000075610.13	1135	6	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCAAATGTCTGATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	130972884	130989561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_130973119_130975264_130975560_130975793_130975993_130985653_130985730_130986228_130986323_130989346
ENSMUSG00000063179.14_2	chr7	+	4266	5	Genic_Genomic	ENSMUSG00000109570.2	novel	2278	1	NA	NA	-7609	10520	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTCAAAAGCCACAAGA	NA	NA	NA	NA	NA	NA	NA	NA	130990377	131010784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr7_+_130991450_130991590_130994312_130995485_130995667_130998397_130998557_131010651
ENSMUSG00000063193.10_0	chr11	-	2620	4	FSM	ENSMUSG00000063193.10	ENSMUST00000149663.4	2641	4	16	5	16	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAATTTGTATTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	114825181	114813611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_114815888_114816849_114816941_114819119_114819226_114825034
ENSMUSG00000063193.10_1	chr11	-	2845	4	FSM	ENSMUSG00000063193.10	ENSMUST00000239005.2	2880	4	30	5	15	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTAATTTGTATTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	114825182	114813611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_114815888_114816849_114816941_114819119_114819450_114825034
ENSMUSG00000063200.5_0	chr13	+	1778	8	FSM	ENSMUSG00000063200.5	ENSMUST00000071926.5	1800	8	13	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCACACTGTTGACATG	NA	NA	NA	NA	NA	NA	NA	NA	43551878	43556328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975_43555054_43555237
ENSMUSG00000063200.5_4	chr13	+	751	7	FSM	ENSMUSG00000063200.5	ENSMUST00000222499.2	756	7	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGGTGGGTCATGATTT	NA	NA	NA	NA	NA	NA	NA	NA	43551872	43555111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_43552135_43552210_43552272_43552986_43553046_43554068_43554098_43554328_43554411_43554772_43554895_43554975
ENSMUSG00000063229.16_0	chr7	+	1576	8	FSM	ENSMUSG00000063229.16	ENSMUST00000048209.16	1588	8	4	8	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	35072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGATGGCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46495266	46505043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46495342_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_22	chr7	+	1759	8	FSM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGATGGCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46496554	46505043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46496813_46497019_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063229.16_27	chr7	+	1501	7	ISM	ENSMUSG00000063229.16	ENSMUST00000005051.6	1766	8	465	7	0	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGTGATGGCTCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	46497019	46505043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_46497170_46498396_46498515_46499601_46499776_46500308_46500483_46501300_46501419_46503406_46503531_46504400
ENSMUSG00000063235.19_1	chr2	-	1307	4	FSM	ENSMUSG00000063235.19	ENSMUST00000111461.13	1316	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	758	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGGGACTCCCCTCACA	NA	NA	NA	NA	NA	NA	NA	NA	90748380	90741056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_90741664_90744327_90744520_90747772_90747854_90747953
ENSMUSG00000063236.7_0	chr15	+	1039	5	FSM	ENSMUSG00000063236.7	ENSMUST00000071792.7	1043	5	0	4	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAATAGGATGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76832705	76834925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76832745_76832828_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUSG00000063236.7_4	chr15	+	1079	4	FSM	ENSMUSG00000063236.7	ENSMUST00000230274.2	1111	4	28	4	28	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAATAGGATGGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	76832749	76834925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76833120_76833267_76833353_76833743_76833891_76834448
ENSMUSG00000063239.18_0	chr17	-	2483	10	FSM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGCCATGGTGGGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	27695810	27645591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881_27692099_27695713
ENSMUSG00000063239.18_1	chr17	-	2387	9	ISM	ENSMUSG00000063239.18	ENST00000544773.6	2491	10	3719	0	3719	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGCCATGGTGGGCAACT	NA	NA	NA	NA	NA	NA	NA	NA	27692099	27645591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_27645808_27650305_27650553_27653506_27654443_27657269_27657407_27657635_27657837_27669098_27669240_27670878_27671034_27673460_27673597_27691881
ENSMUSG00000063253.12_10	chr8	-	1760	4	FSM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	4	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGCTGTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84169132	84161144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84162670_84164181_84164263_84164613_84164686_84169050
ENSMUSG00000063253.12_11	chr8	-	1679	3	ISM	ENSMUSG00000063253.12	ENSMUST00000167525.3	1764	4	4450	0	-34	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGCTGTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84164686	84161144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84162670_84164181_84164263_84164613
ENSMUSG00000063253.12_3	chr8	-	1781	4	FSM	ENSMUSG00000063253.12	ENSMUST00000081506.11	1791	4	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTTTTGTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	84184973	84161128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84162670_84164181_84164266_84164613_84164686_84184889
ENSMUSG00000063253.12_8	chr8	-	1564	2	FSM	ENSMUSG00000063253.12	ENST00000506597.2	1575	2	0	11	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGCTGTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84164652	84161144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84162670_84164613
ENSMUSG00000063253.12_9	chr8	-	1512	1	ISM	ENSMUSG00000063253.12	ENSMUST00000081506.11	1791	4	22322	21	1996	0	mono-exon	FALSE	NA	NA	NA	NA	NA	397	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAAGCTGTTTCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	84162656	84161144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_84161100_84162700
ENSMUSG00000063268.13_0	chr15	-	3264	11	FSM	ENSMUSG00000063268.13	ENSMUST00000075689.7	3284	11	15	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGTTAGAAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	76127626	76117207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263_76127443_76127546
ENSMUSG00000063268.13_1	chr15	-	3324	10	FSM	ENSMUSG00000063268.13	ENSMUST00000165738.8	3367	10	38	5	38	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAGTTAGAAGGACCGG	NA	NA	NA	NA	NA	NA	NA	NA	76127582	76117207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76117807_76117897_76118073_76124248_76124383_76124486_76125132_76125355_76125429_76125525_76125748_76125857_76126523_76126602_76126840_76126931_76127187_76127263
ENSMUSG00000063273.12_0	chr3	+	7427	20	FSM	ENSMUSG00000063273.12	ENSMUST00000193266.6	7480	20	50	3	50	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTAGCCCCTGCTGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	51322618	51383925	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51323798_51343635_51343721_51345759_51345865_51349326_51349485_51350156_51350292_51351218_51351373_51354067_51354188_51355761_51355858_51355973_51356081_51358730_51358804_51363254_51363425_51364718_51364872_51366042_51366172_51367367_51367582_51368504_51368699_51370684_51370794_51373014_51373114_51377506_51377651_51378905_51379004_51380020
ENSMUSG00000063275.16_0	chr2	-	1061	6	FSM	ENSMUSG00000063275.16	ENST00000361271.8	1075	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTATAAACTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	14060810	14031550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049931_14050067_14060541
ENSMUSG00000063275.16_4	chr2	-	852	6	FSM	ENSMUSG00000063275.16	ENSMUST00000091429.12	871	6	8	11	-5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATACCATGGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	14060823	14031652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_14031818_14040589_14040769_14049593_14049683_14049758_14049778_14049948_14050067_14060541
ENSMUSG00000063275.16_5	chr2	-	976	7	FSM	ENSMUSG00000063275.16	ENSMUST00000114753.8	993	7	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAATACCATGGATTGCA	NA	NA	NA	NA	NA	NA	NA	NA	14060825	14031652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_14031818_14040589_14040769_14045644_14045767_14049593_14049683_14049758_14049778_14049948_14050067_14060541
ENSMUSG00000063281.10_0	chr18	+	3028	3	FSM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGAAAATTTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	24122694	24138427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_24122789_24123234_24123448_24135706
ENSMUSG00000063281.10_1	chr18	+	2936	2	ISM	ENSMUSG00000063281.10	ENSMUST00000074941.8	3040	3	544	6	544	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAGAAAATTTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	24123232	24138427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_24123448_24135706
ENSMUSG00000063296.6_0	chr15	+	2485	6	FSM	ENSMUSG00000063296.6	ENST00000551577.5	2509	6	10	14	10	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	1738	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAGAATTATATGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94535971	94993960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_94536245_94612742_94612876_94777261_94777362_94829676_94829775_94909196_94909357_94992239
ENSMUSG00000063316.14_0	chr11	+	583	5	FSM	ENSMUSG00000063316.14	ENSMUST00000077856.13	614	5	8	23	8	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	10236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAATTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101333131	101336332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101333283_101333548_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUSG00000063316.14_6	chr11	+	701	4	FSM	ENSMUSG00000063316.14	ENSMUST00000107249.8	732	4	8	23	8	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAATTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	101333279	101336332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101333632_101334326_101334497_101336045_101336157_101336264
ENSMUSG00000063320.12_0	chr10	-	693	3	FSM	ENSMUSG00000063320.12	ENSMUST00000079648.12	716	3	16	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGTCTTACTATACA	NA	NA	NA	NA	NA	NA	NA	NA	82459014	82455691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82456052_82458541_82458659_82458798
ENSMUSG00000063320.12_1	chr10	-	384	3	FSM	ENSMUSG00000063320.12	ENSMUST00000183363.2	406	3	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCGAATTTAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	82459011	82455868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82456052_82458541_82458659_82458927
ENSMUSG00000063320.12_2	chr10	-	300	2	FSM	ENSMUSG00000063320.12	ENSMUST00000176200.8	586	2	102	184	102	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACACCGAATTTAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	82458658	82455868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_82456052_82458541
ENSMUSG00000063334.17_0	chr10	+	5003	10	FSM	ENSMUSG00000063334.17	ENSMUST00000163048.8	5023	10	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTTAAAGAATGCTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	111808580	111824329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111808780_111811389_111811563_111812646_111812782_111813016_111813143_111813219_111813304_111814995_111815053_111815791_111815963_111818705_111818784_111818868_111818963_111820443
ENSMUSG00000063354.8_0	chr15	-	1202	7	FSM	ENSMUSG00000063354.8	ENST00000276833.9	1215	7	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTATCCCATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76498843	76496735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256_76498430_76498686
ENSMUSG00000063354.8_2	chr15	-	1963	11	FSM	ENSMUSG00000063354.8	ENST00000301305.8	1974	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTCTATCCCATCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	76500873	76496735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76496864_76496954_76497143_76497403_76497557_76497656_76497712_76497797_76498146_76498256_76498430_76498686_76498859_76498949_76499114_76499243_76499440_76500074_76500360_76500772
ENSMUSG00000063358.18_0	chr16	+	5078	9	FSM	ENSMUSG00000063358.18	ENSMUST00000069107.14	5099	9	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATTACATTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	16801256	16865307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177_16856304_16861549
ENSMUSG00000063358.18_12	chr16	+	929	7	FSM	ENSMUSG00000063358.18	ENST00000544786.1	945	7	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTTAAATTGGTCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	16801497	16856285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16853305_16853416_16856177
ENSMUSG00000063358.18_9	chr16	+	1729	8	FSM	ENSMUSG00000063358.18	ENSMUST00000115731.10	1747	8	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATATGCTAATAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	16801438	16856894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_16801604_16833761_16833945_16836149_16836340_16841315_16841433_16843889_16844005_16844221_16844354_16853305_16853416_16856177
ENSMUSG00000063362.14_0	chr8	+	4950	4	FSM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCAACCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22550736	22561633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22550787_22551901_22552133_22555015_22555948_22557896
ENSMUSG00000063362.14_1	chr8	+	4823	4	FSM	ENSMUSG00000063362.14	ENSMUST00000110737.3	4833	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCAACCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22550737	22561633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_22550787_22551901_22552133_22555141_22555948_22557896
ENSMUSG00000063362.14_2	chr8	+	4898	3	ISM	ENSMUSG00000063362.14	ENSMUST00000072572.13	4960	4	1167	10	1166	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCAACCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22551903	22561633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_22552133_22555015_22555948_22557896
ENSMUSG00000063362.14_3	chr8	+	4766	3	ISM	ENSMUSG00000063362.14	ENSMUST00000110737.3	4833	4	1172	10	1172	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATGCAACCTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	22551909	22561633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_22552133_22555141_22555948_22557896
ENSMUSG00000063364.11_0	chr2	-	618	4	FSM	ENSMUSG00000063364.11	ENSMUST00000051153.6	650	4	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATCAGTGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	150204661	150152862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150153139_150186228_150186290_150186499_150186627_150204507
ENSMUSG00000063382.7_0	chr9	+	5722	8	FSM	ENSMUSG00000063382.7	ENSMUST00000220303.2	5760	8	8	30	8	-30	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAAAAGATTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	44394129	44421689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44394784_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUSG00000063382.7_1	chr9	+	6756	10	FSM	ENSMUSG00000063382.7	ENSMUST00000218183.2	6771	10	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAGAAAATTCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	44398543	44423178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44398584_44400951_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUSG00000063382.7_2	chr9	+	6717	9	ISM	ENSMUSG00000063382.7	ENSMUST00000218183.2	6771	10	2413	9	2413	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATTCAAAAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44400956	44423184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44401009_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUSG00000063382.7_4	chr9	+	5291	9	FSM	ENSMUSG00000063382.7	ENSMUST00000074989.7	5339	9	15	33	15	-32	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAAAAAAAGATTGAG	NA	NA	NA	NA	NA	NA	NA	NA	44410447	44421687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44410571_44410744_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUSG00000063382.7_6	chr9	+	6667	8	ISM	ENSMUSG00000063382.7	ENSMUST00000074989.7	5339	9	310	-1464	310	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATTCAAAAATGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	44410742	44423184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44410847_44412041_44412428_44413098_44413219_44416349_44416561_44416712_44416798_44416880_44419168_44419449_44419732_44419992
ENSMUSG00000063383.6_0	chr17	-	2851	5	FSM	ENSMUSG00000063383.6	ENSMUST00000080249.6	2872	5	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTGAACTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	22385157	22363346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22365516_22366369_22366497_22369015_22369064_22382167_22382317_22384799
ENSMUSG00000063406.12_0	chr5	-	3779	4	FSM	ENSMUSG00000063406.12	ENSMUST00000002837.11	3800	4	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACCTATCATAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108280474	108269501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_108272626_108273766_108273951_108277883_108277982_108280101
ENSMUSG00000063409.13_0	chr5	+	1301	7	FSM	ENSMUSG00000063409.13	ENST00000339777.5	1320	7	10	9	10	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAGAAAGTGAGCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	123630291	123641370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123630544_123632263_123632375_123634941_123635082_123637490_123637730_123638288_123638457_123639134_123639394_123641238
ENSMUSG00000063410.9_0	chr14	-	2653	11	FSM	ENSMUSG00000063410.9	ENSMUST00000079817.8	2676	11	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTCACTCATTTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	121616730	121523761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_121524777_121529391_121529529_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ENSMUSG00000063410.9_6	chr14	-	1196	9	ISM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	41289	0	41289	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGTAACCGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121575056	121529397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_121529522_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833
ENSMUSG00000063410.9_7	chr14	-	1240	10	FSM	ENSMUSG00000063410.9	ENST00000455035.1	1240	10	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGGTAACCGGCCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	121616345	121529397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_121529522_121530832_121530902_121531601_121531726_121532066_121532213_121534546_121534733_121539597_121539756_121540158_121540268_121545426_121545484_121574833_121575065_121616309
ENSMUSG00000063412.5_0	chr8	-	721	1	FSM	ENSMUSG00000063412.5	ENSMUST00000080152.5	736	1	14	1	14	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTGTATTTTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34578877	34578156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34578200_34578900
ENSMUSG00000063415.13_0	chr6	-	4256	6	FSM	ENSMUSG00000063415.13	ENSMUST00000205228.3	4288	6	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTGTCTGGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84564630	84548395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_84551642_84551990_84552276_84553516_84553673_84553910_84554187_84561231_84561457_84564562
ENSMUSG00000063415.13_1	chr6	-	4185	5	ISM	ENSMUSG00000063415.13	ENSMUST00000205228.3	4288	6	3209	0	3209	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCTGTCTGGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	84561453	84548395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_84551642_84551990_84552276_84553516_84553673_84553910_84554187_84561231
ENSMUSG00000063428.9_0	chr10	+	2402	5	FSM	ENSMUSG00000063428.9	ENSMUST00000213442.2	2408	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTCAAATGTCTACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	40506041	40517558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_40506088_40507601_40507777_40508933_40509043_40513340_40513518_40515663
ENSMUSG00000063428.9_1	chr10	+	2350	4	ISM	ENSMUSG00000063428.9	ENSMUST00000213442.2	2408	5	1563	9	1532	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATTTTCAAATGTCTACT	NA	NA	NA	NA	NA	NA	NA	NA	40507604	40517555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_40507777_40508933_40509043_40513340_40513518_40515663
ENSMUSG00000063439.8_0	chr7	+	986	4	FSM	ENSMUSG00000063439.8	ENSMUST00000205658.2	995	4	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTAAGGTGCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25380209	25385979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25380404_25380807_25380900_25382715_25382842_25385405
ENSMUSG00000063439.8_1	chr7	+	999	3	FSM	ENSMUSG00000063439.8	ENSMUST00000108403.4	1021	3	18	4	18	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGTAAGGTGCCTCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	25380600	25385979	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25380900_25382715_25382842_25385405
ENSMUSG00000063445.15_0	chr16	-	2422	5	FSM	ENSMUSG00000063445.15	ENSMUST00000120056.8	2440	5	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGAGGAAACTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	4536959	4527926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUSG00000063445.15_1	chr16	-	1269	5	FSM	ENSMUSG00000063445.15	ENSMUST00000115851.10	1306	5	29	8	-15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAATGGTTTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	4536991	4529188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4529545_4531503_4531695_4532280_4532531_4534160_4534400_4536758
ENSMUSG00000063445.15_2	chr16	-	1431	6	FSM	ENSMUSG00000063445.15	ENSMUST00000079130.14	1459	6	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAAATGGTTTCCCAAA	NA	NA	NA	NA	NA	NA	NA	NA	4537200	4529188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4529468_4531503_4531695_4532280_4532531_4533464_4533495_4534160_4534400_4536758
ENSMUSG00000063450.15_0	chr12	+	21687	116	FSM	ENSMUSG00000063450.15	ENSMUST00000044217.16	21690	116	0	3	0	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75865091	76157671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032_75952146_75953484_75953648_75955641_75955721_75955949_75956138_75957789_75957955_75959079_75959200_75961962_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698_75969858_75972042_75972255_75972405_75972497_75973229_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059_75992352_75993451_75993604_75995835_75996146_75997710_75997876_75999457_75999800_76009291_76009448_76010441_76010708_76012423_76014528_76016136_76016460_76018542_76018688_76020050_76020270_76026577_76026841_76028666_76028836_76030733_76030890_76033747_76033889_76035847_76036031_76037138_76037277_76040797_76040984_76042670_76042794_76044177_76044361_76047526_76047659_76051349_76051542_76052146_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070789_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155060_76155086_76155647_76155685_76156595
ENSMUSG00000063450.15_12	chr12	+	21614	115	NNC	ENSMUSG00000063450.15	novel	21704	115	NA	NA	54	-7	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCTCATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75865145	76157667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032_75952146_75953484_75953648_75955641_75955721_75955949_75956138_75957789_75957955_75959076_75959200_75961962_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698_75969858_75972042_75972255_75972405_75972497_75973229_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059_75992352_75993451_75993604_75995835_75996146_75997710_75997876_75999457_75999800_76009291_76009448_76010441_76010708_76012423_76014528_76016136_76016460_76018542_76018688_76020050_76020270_76026577_76026841_76028666_76028836_76030733_76030890_76033747_76033889_76035847_76036031_76037138_76037277_76040797_76040984_76042670_76042794_76044177_76044361_76047526_76047659_76051349_76051542_76052146_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070792_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155637_76155685_76156595
ENSMUSG00000063450.15_2	chr12	+	21666	115	FSM	ENSMUSG00000063450.15	ENSMUST00000143031.8	21704	115	9	29	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75865100	76157671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_75865253_75900794_75900922_75925107_75925170_75926886_75926983_75927092_75927171_75927258_75927352_75934927_75935116_75936999_75937197_75939856_75939958_75943376_75943479_75945925_75946064_75950984_75951150_75952032_75952146_75953484_75953648_75955641_75955721_75955949_75956138_75957789_75957955_75959076_75959200_75961962_75962137_75965287_75965447_75965739_75965914_75967888_75968024_75969698_75969858_75972042_75972255_75972405_75972497_75973229_75973349_75974156_75974284_75976031_75976190_75976474_75976623_75977339_75977924_75980611_75980792_75981246_75981398_75984101_75984261_75985413_75985576_75986684_75986787_75987964_75988166_75988962_75989135_75989616_75989730_75990626_75990830_75991849_75991970_75992059_75992352_75993451_75993604_75995835_75996146_75997710_75997876_75999457_75999800_76009291_76009448_76010441_76010708_76012423_76014528_76016136_76016460_76018542_76018688_76020050_76020270_76026577_76026841_76028666_76028836_76030733_76030890_76033747_76033889_76035847_76036031_76037138_76037277_76040797_76040984_76042670_76042794_76044177_76044361_76047526_76047659_76051349_76051542_76052146_76052222_76054904_76055019_76055598_76055716_76062255_76062487_76067109_76067293_76069028_76069158_76069796_76069919_76070789_76070932_76072330_76072463_76074481_76074635_76074729_76074940_76076572_76076675_76078049_76078170_76078270_76078469_76080368_76080543_76082303_76082436_76085662_76085860_76087127_76087261_76088121_76088305_76088763_76088911_76090480_76090658_76092835_76092992_76095274_76095428_76098872_76099044_76099500_76099632_76101542_76101748_76103536_76103717_76104250_76104380_76106205_76106361_76106455_76106601_76106924_76107020_76108361_76108597_76110866_76111062_76113286_76113413_76118901_76119058_76121211_76121371_76122515_76122683_76134524_76134688_76141054_76141243_76141815_76141967_76142265_76142449_76143643_76143782_76144657_76144853_76146003_76146287_76147765_76147906_76149741_76149845_76150520_76150724_76151738_76151940_76152762_76152892_76154257_76154450_76154917_76154990_76155637_76155685_76156595
ENSMUSG00000063457.15_0	chr10	+	499	4	FSM	ENSMUSG00000063457.15	ENSMUST00000068408.14	500	4	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128286	80129947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80128318_80128608_80128695_80129475_80129711_80129800
ENSMUSG00000063457.15_3	chr10	+	458	3	FSM	ENSMUSG00000063457.15	ENSMUST00000062674.7	572	3	140	-26	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGGGTTTTTGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	80128618	80129947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80128695_80129475_80129711_80129800
ENSMUSG00000063457.15_9	chr10	+	341	2	ISM	ENSMUSG00000063457.15	ENST00000591804.6	383	3	870	5	870	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGCCGAGGCCAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	80129477	80129908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_80129711_80129800
ENSMUSG00000063458.14_0	chr14	+	912	7	NNC	ENSMUSG00000063458.14	novel	908	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAGAAAAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	22069779	23106147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_22069977_22077294_22077398_22627913_22628043_22634473_22634614_22646492_22646612_22878754_22878852_23106020
ENSMUSG00000063458.14_12	chr14	+	612	5	NNC	ENSMUSG00000063458.14	novel	742	7	NA	NA	557998	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGCAAGAAAAATCACAG	NA	NA	NA	NA	NA	NA	NA	NA	22627913	23106147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_+_22628043_22634473_22634614_22646492_22646612_22878754_22878852_23106020
ENSMUSG00000063480.9_0	chr15	-	2060	3	FSM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTATTTTTGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81931789	81924732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81926570_81928097_81928219_81931687
ENSMUSG00000063480.9_1	chr15	-	1959	2	ISM	ENSMUSG00000063480.9	ENSMUST00000080622.9	2077	3	3580	7	3580	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTTATTTTTGGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	81928219	81924732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_81926570_81928097
ENSMUSG00000063506.15_1	chr14	+	2156	9	FSM	ENSMUSG00000063506.15	ENST00000435790.6	2173	9	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAAGGACCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	32938735	33089395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32939069_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_10	chr14	+	2558	10	ISM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	138	6	138	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGGCGCCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	32938917	33091885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_32939069_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063506.15_18	chr14	+	2095	9	FSM	ENSMUSG00000063506.15	ENST00000249601.9	2114	9	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAAGGACCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	32972422	33089395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32972695_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_22	chr14	+	1860	8	FSM	ENSMUSG00000063506.15	ENST00000417912.6	1874	8	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTAAAGGACCACTCT	NA	NA	NA	NA	NA	NA	NA	NA	32993751	33089395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32993941_33020660_33020749_33065185_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_28	chr14	+	1666	7	FSM	ENSMUSG00000063506.15	ENST00000374172.5	1679	7	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGGTAAAGGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	33020663	33089393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33020749_33065185_33065363_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526
ENSMUSG00000063506.15_4	chr14	+	2590	11	FSM	ENSMUSG00000063506.15	ENSMUST00000111956.9	2596	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGGCGCCTGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	32938779	33091885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_32938803_32938908_32939069_32993740_32993941_33020660_33020749_33065185_33065315_33081074_33081283_33084399_33084533_33085232_33085307_33086349_33086472_33088526_33089401_33091306
ENSMUSG00000063511.12_0	chr7	-	1720	10	FSM	ENSMUSG00000063511.12	ENSMUST00000074575.11	1735	10	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGATGTCTTACTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	45045152	45025877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45026703_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082_45044240_45044932
ENSMUSG00000063511.12_4	chr7	-	1312	9	FSM	ENSMUSG00000063511.12	ENST00000221448.9	1333	9	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAAGAGGCCTGTAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	45044226	45026025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_45026676_45026779_45026868_45030140_45030243_45033227_45033310_45036666_45036730_45036812_45036878_45041502_45041558_45041686_45041750_45044082
ENSMUSG00000063524.14_0	chr4	+	2010	12	FSM	ENSMUSG00000063524.14	ENSMUST00000080926.13	2027	12	10	7	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	53009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGTGTGCTGGGCATCTC	NA	NA	NA	NA	NA	NA	NA	NA	150321418	150333329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150321798_150323929_150324024_150325501_150325598_150326578_150326638_150328461_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063524.14_38	chr4	+	1883	8	FSM	ENSMUSG00000063524.14	ENSMUST00000080149.6	1902	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCCACCAGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	150327952	150333321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_150328532_150328697_150328832_150329571_150329795_150331026_150331225_150331907_150332110_150332287_150332397_150332517_150332577_150332942
ENSMUSG00000063531.8_0	chr5	+	6840	17	FSM	ENSMUSG00000063531.8	ENSMUST00000073957.8	6861	17	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTAAGTGCTATCAG	NA	NA	NA	NA	NA	NA	NA	NA	14075304	14306697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_14076039_14193887_14194049_14212201_14212262_14214072_14214193_14260304_14260399_14274300_14274421_14275566_14275710_14276429_14276545_14276648_14276719_14280120_14280266_14282008_14282232_14283638_14283731_14286055_14286098_14286280_14286448_14290583_14290652_14290976_14291117_14302351
ENSMUSG00000063535.8_0	chr7	-	4053	4	FSM	ENSMUSG00000063535.8	ENSMUST00000211240.2	4073	4	9	11	9	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAAGAACTGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	7139714	7130082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7133642_7137165_7137250_7138290_7138418_7139431
ENSMUSG00000063550.9_1	chr7	-	6677	33	FSM	ENSMUSG00000063550.9	ENSMUST00000210682.2	6694	33	9	8	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATTCCTGGTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	101859374	101768612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUSG00000063550.9_24	chr7	-	4028	23	FSM	ENSMUSG00000063550.9	ENSMUST00000070165.7	4052	23	23	1	23	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACATCTCAGGAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	101859304	101783410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUSG00000063550.9_27	chr7	-	3512	21	FSM	ENSMUSG00000063550.9	ENST00000397007.8	3529	21	12	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACTTTCTGGAGAATCT	NA	NA	NA	NA	NA	NA	NA	NA	101859338	101793765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101793907_101794327_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829583_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUSG00000063550.9_3	chr7	-	6601	33	FSM	ENSMUSG00000063550.9	ENST00000324932.12	6615	33	10	4	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTATTCCTGGTGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	101859349	101768612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101769879_101769965_101770078_101772744_101772900_101773359_101773602_101774309_101774532_101775656_101775800_101776970_101777115_101778150_101778309_101779022_101779290_101781838_101782069_101783770_101784201_101787938_101788093_101788674_101788858_101794763_101794929_101796406_101796585_101801524_101801664_101802342_101802457_101803001_101803301_101806258_101806376_101809747_101809936_101812895_101813030_101818569_101818711_101825519_101825613_101829634_101829723_101832669_101832808_101834012_101834177_101835067_101835249_101835838_101835947_101841109_101841250_101843867_101844045_101844155_101844258_101844991_101845096_101859224
ENSMUSG00000063556.6_0	chr14	-	507	1	FSM	ENSMUSG00000063556.6	ENSMUST00000099431.6	468	1	4	-43	4	43	mono-exon	FALSE	NA	NA	NA	NA	NA	422	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCATAAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	77489750	77489243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_77489200_77489800
ENSMUSG00000063576.13_0	chr17	-	1804	10	FSM	ENSMUSG00000063576.13	ENST00000244670.12	1821	10	10	7	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACGTGTCCTATTTCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	46991806	46985478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_19	chr17	-	1937	11	FSM	ENSMUSG00000063576.13	ENSMUST00000165007.9	1954	11	8	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCCAAACGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	46991832	46985487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46991627
ENSMUSG00000063576.13_37	chr17	-	1845	12	FSM	ENSMUSG00000063576.13	ENSMUST00000233733.2	1854	12	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACCCGGCTAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	46991723	46986692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46987148_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUSG00000063576.13_7	chr17	-	2073	12	FSM	ENSMUSG00000063576.13	ENSMUST00000071841.7	2100	12	15	12	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTCCAAACGTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	46991815	46985487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46986079_46987241_46987321_46987429_46987504_46987622_46987732_46987869_46987957_46988030_46988245_46988353_46988426_46988610_46988727_46988857_46989035_46989206_46989420_46989967_46990121_46991627
ENSMUSG00000063600.15_0	chr3	+	1126	8	FSM	ENSMUSG00000063600.15	ENST00000431685.2	1140	8	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	332	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGTACAATCCGATGA	NA	NA	NA	NA	NA	NA	NA	NA	29568040	29744338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_29568160_29637055_29637179_29711278_29711417_29716525_29716649_29722389_29722588_29724714_29724852_29740786_29740946_29744209
ENSMUSG00000063605.6_0	chr8	-	2289	9	FSM	ENSMUSG00000063605.6	ENSMUST00000077955.6	2304	9	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAGAGTTCTGAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95644713	95629498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_95630020_95631884_95631989_95632559_95632731_95634342_95634553_95634901_95635019_95636371_95636481_95638055_95638283_95639710_95640437_95644609
ENSMUSG00000063632.7_0	chr12	-	8291	1	FSM	ENSMUSG00000063632.7	ENSMUST00000079063.7	8311	1	17	3	17	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCTATTGATAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	27392556	27384265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_27384300_27392600
ENSMUSG00000063646.19_0	chr5	+	2405	13	FSM	ENSMUSG00000063646.19	ENST00000282924.9	2415	13	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTTTGCCTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	37185798	37282639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_37185944_37242579_37242843_37248470_37248966_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37264602_37264663_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220
ENSMUSG00000063646.19_2	chr5	+	2212	19	FSM	ENSMUSG00000063646.19	ENST00000409371.8	2233	19	15	6	15	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACTCCCATGCGCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	37185805	37305344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_37185944_37242579_37242843_37257979_37258190_37259108_37259229_37262156_37262304_37262954_37263096_37274785_37274915_37276122_37276252_37278284_37278369_37280623_37280687_37282220_37282320_37284720_37284823_37285348_37285403_37285934_37286001_37291580_37291650_37292899_37292978_37298956_37299161_37300136_37300203_37305294
ENSMUSG00000063652.11_0	chr11	-	3425	10	FSM	ENSMUSG00000063652.11	ENSMUST00000076493.11	3461	10	26	10	26	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAATAAATAATAG	NA	NA	NA	NA	NA	NA	NA	NA	53871132	53840800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53842182_53842532_53842669_53843826_53844010_53845513_53845729_53846810_53846921_53848799_53848927_53850029_53850202_53851108_53851264_53860325_53860430_53870290
ENSMUSG00000063659.12_0	chr1	+	4178	2	FSM	ENSMUSG00000063659.12	ENSMUST00000094276.5	4204	2	12	14	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGAACTGAGAATTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	177271872	177278316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_177272389_177274654
ENSMUSG00000063659.12_1	chr1	+	4928	1	FSM	ENSMUSG00000063659.12	ENSMUST00000077225.8	4944	1	4	12	4	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGAGAATTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	177273390	177278318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_177273400_177278300
ENSMUSG00000063681.15_0	chr1	-	3797	9	FSM	ENSMUSG00000063681.15	ENST00000367399.6	3812	9	9	6	9	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGGAGACTGCTGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	139265337	139126315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_139126526_139159401_139159529_139162464_139162594_139164559_139165467_139168860_139169027_139170715_139171264_139175856_139176814_139242308_139242492_139264767
ENSMUSG00000063681.15_6	chr1	-	3392	6	FSM	ENSMUSG00000063681.15	ENST00000367397.1	3400	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCAGGGGAAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	139183432	139161923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_139162594_139164559_139165467_139168860_139169027_139170715_139171264_139175856_139176814_139183288
ENSMUSG00000063687.4_0	chr18	+	3517	1	FSM	ENSMUSG00000063687.4	ENSMUST00000078271.4	3535	1	8	10	8	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCACTGATTTAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	37453441	37456958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37453400_37457000
ENSMUSG00000063694.6_0	chr6	-	3111	3	FSM	ENSMUSG00000063694.6	ENSMUST00000161401.2	3123	3	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3544	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACACACTCGCTGTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	50543509	50539545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_50542366_50542471_50542649_50543395
ENSMUSG00000063698.10_0	chr19	-	1285	14	FSM	ENSMUSG00000063698.10	ENSMUST00000135808.8	1309	14	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGAAAGAAATCATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	60849905	60827197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_60827489_60830556_60830675_60832646_60832733_60839396_60839513_60840449_60840529_60842124_60842191_60842301_60842359_60842444_60842499_60844264_60844291_60845647_60845703_60845787_60845815_60847101_60847177_60848466_60848533_60849736
ENSMUSG00000063704.14_0	chr15	+	660	5	FSM	ENSMUSG00000063704.14	ENST00000395107.8	674	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCATTGCCTTCCATGGA	NA	NA	NA	NA	NA	NA	NA	NA	75866700	75868341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75866793_75867063_75867178_75867634_75867807_75867889_75868054_75868223
ENSMUSG00000063704.14_1	chr15	+	954	8	FSM	ENSMUSG00000063704.14	ENST00000338033.9	961	8	7	0	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCATCGTCCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75866699	75869796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75866793_75867063_75867174_75867675_75867807_75867889_75868054_75868223_75868364_75868959_75869018_75869418_75869557_75869676
ENSMUSG00000063704.14_7	chr15	+	864	7	ISM	ENSMUSG00000063704.14	ENST00000338033.9	961	8	368	0	368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCCATCGTCCGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	75867060	75869796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_75867174_75867675_75867807_75867889_75868054_75868223_75868364_75868959_75869018_75869418_75869557_75869676
ENSMUSG00000063714.16_0	chr2	+	558	3	FSM	ENSMUSG00000063714.16	ENSMUST00000123087.8	583	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATAAACAGAGTTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	72809780	72819009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_72809940_72817871_72817977_72818715
ENSMUSG00000063714.16_1	chr2	+	548	3	NNC	ENSMUSG00000063714.16	novel	583	3	NA	NA	20	-14	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAATAAACAGAGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	72809787	72819007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_72809939_72817871_72817977_72818715
ENSMUSG00000063730.14_0	chr3	-	3687	6	FSM	ENSMUSG00000063730.14	ENSMUST00000107022.8	3695	6	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGACTAGCCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	98631858	98616577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_98619634_98620743_98620909_98623731_98623943_98626975_98627101_98631148_98631209_98631788
ENSMUSG00000063730.14_1	chr3	-	3597	5	ISM	ENSMUSG00000063730.14	ENSMUST00000107022.8	3695	6	651	27	639	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAATAAAAAATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	98631208	98616597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_98619634_98620743_98620909_98623731_98623943_98626975_98627101_98631148
ENSMUSG00000063760.10_0	chr10	-	10999	6	FSM	ENSMUSG00000063760.10	ENSMUST00000081989.8	11013	6	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGAAGACTCATGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31485172	31369194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_31378728_31379746_31379819_31381768_31381971_31393379_31393545_31410658_31410893_31484379
ENSMUSG00000063765.13_0	chr15	-	2508	6	FSM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	2	38	2	-38	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAAAAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81581486	81570403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734_81579445_81580050_81580226_81581429
ENSMUSG00000063765.13_1	chr15	-	2451	5	ISM	ENSMUSG00000063765.13	ENSMUST00000072910.6	2548	6	1269	32	1269	-32	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81580219	81570397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_81570604_81576308_81576508_81577187_81577355_81577734_81579445_81580050
ENSMUSG00000063767.5_1	chr3	+	1272	3	FSM	ENSMUSG00000063767.5	ENSMUST00000079286.4	1280	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAACATGTGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90561608	90565968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90561649_90562744_90562965_90564956
ENSMUSG00000063767.5_2	chr3	+	1231	2	ISM	ENSMUSG00000063767.5	ENSMUST00000079286.4	1280	3	1137	8	1137	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGAACATGTGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	90562745	90565968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90562965_90564956
ENSMUSG00000063785.13_0	chrX	+	2497	15	FSM	ENSMUSG00000063785.13	ENSMUST00000080713.5	2507	15	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTCGACTACCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	47345744	47371326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47345846_47347216_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47352353_47352510_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063785.13_4	chrX	+	2230	13	FSM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCTTTATAACTCGACT	NA	NA	NA	NA	NA	NA	NA	NA	47347217	47371317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_47347293_47348599_47348671_47349462_47349528_47351771_47351915_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063785.13_9	chrX	+	2154	12	ISM	ENSMUSG00000063785.13	ENST00000425117.6	2233	13	1386	0	1386	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCTTTATAACTCGACT	NA	NA	NA	NA	NA	NA	NA	NA	47348600	47371317	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_47348671_47349462_47349528_47351771_47351915_47361676_47361797_47361898_47361994_47362566_47362691_47362775_47362854_47363677_47364066_47366098_47366497_47367243_47367438_47367544_47367645_47370938
ENSMUSG00000063787.5_0	chr14	+	594	3	FSM	ENSMUSG00000063787.5	ENSMUST00000071215.5	616	3	14	8	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTTGGCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	20753087	20754485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20753266_20753357_20753477_20754188
ENSMUSG00000063800.6_0	chr4	-	1503	10	FSM	ENSMUSG00000063800.6	ENSMUST00000079213.6	1516	10	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCTCTGGCTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	108436524	108422070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108422465_108424101_108424151_108424619_108424718_108424810_108424838_108425554_108425668_108427352_108427464_108430002_108430089_108432565_108432688_108434125_108434286_108436181
ENSMUSG00000063801.8_0	chr7	-	5798	6	FSM	ENSMUSG00000063801.8	ENSMUST00000075657.8	5813	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACCCCTCTGTGGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	79570389	79525079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79530361_79532213_79532322_79559582_79559655_79564894_79565007_79565763_79565856_79570256
ENSMUSG00000063802.6_0	chr7	-	1581	8	FSM	ENSMUSG00000063802.6	ENSMUST00000079970.6	1593	8	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTATGCTGTCTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	4688055	4663519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687569_4687892
ENSMUSG00000063802.6_1	chr7	-	1465	8	FSM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4687964	4663541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270_4687566_4687892
ENSMUSG00000063802.6_2	chr7	-	1394	7	ISM	ENSMUSG00000063802.6	ENST00000433386.7	1475	8	401	7	401	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAAACATTTCTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4687566	4663541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4663845_4666379_4666492_4667518_4667616_4667701_4667858_4680705_4680931_4684842_4685048_4687270
ENSMUSG00000063808.15_0	chr7	-	3049	20	FSM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35017857	34975968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864_35010000_35017765
ENSMUSG00000063808.15_2	chr7	-	2959	19	ISM	ENSMUSG00000063808.15	ENSMUST00000079693.12	3065	20	7864	8	7864	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATGTGCTTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	35010001	34975968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_34976237_34980756_34980906_34982995_34983094_34984140_34984249_34986547_34986762_34987941_34988106_34988464_34988602_34991150_34991279_34993079_34993259_34994679_34994977_34996908_34997114_34998645_34998726_35001002_35001151_35002653_35002897_35005354_35005414_35006613_35006712_35007603_35007765_35008725_35008812_35009864
ENSMUSG00000063820.12_0	chr5	+	598	3	FSM	ENSMUSG00000063820.12	ENST00000640821.3	622	3	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2323	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAGCCATGGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77154332	77158531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77154482_77155078_77155255_77158258
ENSMUSG00000063838.7_0	chr7	-	1011	3	FSM	ENSMUSG00000063838.7	ENSMUST00000076831.7	1025	3	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACTGTCTATTCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	4167849	4154262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4154787_4167091_4167187_4167457
ENSMUSG00000063849.7_0	chr9	-	2687	6	ISM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	2619	25	-2423	-25	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATGTCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57344760	57319960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699
ENSMUSG00000063849.7_2	chr9	-	2716	7	FSM	ENSMUSG00000063849.7	ENSMUST00000085709.6	2744	7	0	28	0	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAATAAATGTCAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57347379	57319963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57328408_57328505_57342185_57342369_57344699_57344766_57347352
ENSMUSG00000063849.7_5	chr9	-	538	4	FSM	ENSMUSG00000063849.7	ENST00000567336.1	549	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGTGATGCCCCTGCACCC	NA	NA	NA	NA	NA	NA	NA	NA	57342327	57321911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57322010_57322368_57322538_57327445_57327575_57342185
ENSMUSG00000063849.7_6	chr9	-	505	4	FSM	ENSMUSG00000063849.7	ENST00000568649.5	516	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGATGCCCCTGCACCCA	NA	NA	NA	NA	NA	NA	NA	NA	57342326	57321910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57322010_57322368_57322538_57328408_57328505_57342185
ENSMUSG00000063856.9_0	chr9	+	1052	2	FSM	ENSMUSG00000063856.9	ENSMUST00000082429.8	1072	2	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	5749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCAGAATTGTTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108216261	108217531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108216758_108216975
ENSMUSG00000063856.9_3	chr9	+	586	2	FSM	ENSMUSG00000063856.9	ENST00000643797.1	601	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCATTCCCGATGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	108216526	108217468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108216620_108216975
ENSMUSG00000063870.13_0	chr6	+	6636	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112392.8	6652	39	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125072959	125107548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079433_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUSG00000063870.13_16	chr6	+	6527	39	FSM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	4	6	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125073128	125107548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUSG00000063870.13_28	chr6	+	6433	38	ISM	ENSMUSG00000063870.13	ENSMUST00000112390.8	6537	39	924	6	924	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125074048	125107548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_125074229_125077430_125077553_125077740_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUSG00000063870.13_4	chr6	+	6678	39	FSM	ENSMUSG00000063870.13	ENSMUST00000056889.15	6697	39	13	6	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTGATCTGGTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	125072956	125107548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125073224_125074049_125074229_125077430_125077553_125077761_125077957_125078180_125078300_125078415_125078658_125078844_125078973_125079125_125079262_125079394_125079574_125079755_125079996_125081829_125082034_125082138_125082345_125083371_125083504_125083602_125083700_125084430_125084623_125085243_125085445_125085621_125085760_125086014_125086137_125086254_125086429_125086741_125086884_125086973_125087106_125087215_125087334_125090427_125090553_125090862_125091101_125091253_125091430_125097167_125097349_125097432_125097520_125097606_125097696_125097802_125097937_125098235_125098381_125098478_125098645_125098894_125098993_125099085_125099246_125099439_125099512_125099780_125099919_125100302_125100412_125100511_125100645_125105754_125105951_125106782
ENSMUSG00000063873.11_0	chr2	+	4044	17	NNC	ENSMUSG00000063873.11	novel	4048	17	NA	NA	3	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACAGTGCATTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	145009676	145484083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_145010118_145086880_145087010_145290423_145290503_145354673_145354749_145360321_145360407_145360763_145360868_145422891_145422967_145433077_145433104_145440260_145440315_145444391_145444526_145446341_145446503_145448516_145448788_145455442_145455610_145458518_145458634_145459753_145459867_145477292_145477359_145482134
ENSMUSG00000063882.13_0	chr4	-	528	4	FSM	ENSMUSG00000063882.13	ENSMUST00000078676.6	547	4	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2662	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCTCTTTGTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	115932256	115924168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_115924370_115927059_115927222_115927933_115927955_115932112
ENSMUSG00000063884.7_0	chr6	-	2557	24	FSM	ENSMUSG00000063884.7	ENSMUST00000082094.5	2581	24	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCTAATTCTTTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	71885718	71857631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_71858216_71858489_71858649_71859171_71859214_71860427_71860577_71861523_71861610_71862292_71862384_71862481_71862561_71865540_71865648_71866324_71866354_71866577_71866671_71869452_71869504_71870365_71870511_71871270_71871357_71871804_71871866_71872888_71872977_71874096_71874153_71875323_71875440_71878179_71878304_71879839_71879945_71880409_71880479_71882081_71882128_71884636_71884674_71884777_71884831_71885617
ENSMUSG00000063888.8_15	chr17	-	730	5	ISM	ENSMUSG00000063888.8	ENSMUST00000233192.2	1310	6	782	525	8	-525	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGCTGCCTGCTGCAC	NA	NA	NA	NA	NA	NA	NA	NA	47092800	47088968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708
ENSMUSG00000063888.8_4	chr17	-	2550	6	ISM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	775	8	1	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1053	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTAAAAAGAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	47092807	47084840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708
ENSMUSG00000063888.8_5	chr17	-	2598	7	FSM	ENSMUSG00000063888.8	ENSMUST00000078286.6	2606	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTAAAAAGAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	47093582	47084840	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47086663_47088977_47089198_47089335_47089446_47090210_47090349_47091316_47091478_47092708_47092818_47093544
ENSMUSG00000063889.17_10	chr18	-	869	7	FSM	ENSMUSG00000063889.17	ENST00000479070.5	885	7	8	8	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGTAGAAATATTTAACT	NA	NA	NA	NA	NA	NA	NA	NA	3325469	3267592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_3267733_3273421_3273579_3276693_3276730_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_17	chr18	-	824	6	FSM	ENSMUSG00000063889.17	ENST00000337656.8	846	6	10	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAGTAACTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3325467	3267996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_3268130_3273421_3273579_3287903_3288093_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_18	chr18	-	635	5	FSM	ENSMUSG00000063889.17	ENST00000374734.7	657	5	10	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGAGTAACTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	3325467	3267996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_3268130_3273421_3273579_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063889.17_8	chr18	-	1361	5	FSM	ENSMUSG00000063889.17	ENST00000348787.6	1376	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGTTCCACAAGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	3325465	3266871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_3267733_3273421_3273579_3295039_3295183_3295321_3295417_3325360
ENSMUSG00000063895.8_2	chr14	-	3912	15	NNC	ENSMUSG00000114797.2	novel	3913	15	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60488956	60455526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_-_60457603_60459027_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUSG00000063904.5_0	chr19	-	2675	18	FSM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTCTGCAGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	4978313	4957262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812_4977088_4978247
ENSMUSG00000063904.5_12	chr19	-	1981	16	FSM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAACGGATGTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	4978275	4959876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4976812_4977088_4978247
ENSMUSG00000063904.5_13	chr19	-	1940	15	ISM	ENSMUSG00000063904.5	ENST00000530165.5	1985	16	1201	4	1201	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTAACGGATGTTACACC	NA	NA	NA	NA	NA	NA	NA	NA	4977074	4959876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4976812
ENSMUSG00000063904.5_2	chr19	-	2607	17	ISM	ENSMUSG00000063904.5	ENSMUST00000025851.4	2683	18	1230	6	1190	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATCTCTGCAGTGTATGT	NA	NA	NA	NA	NA	NA	NA	NA	4977085	4957262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4957826_4959873_4960037_4963800_4963981_4964607_4964729_4964837_4964963_4965046_4965110_4966306_4966400_4966725_4966839_4966919_4967115_4967899_4967959_4968047_4968179_4968272_4968404_4971168_4971263_4972349_4972425_4973094_4973233_4973711_4973802_4976812
ENSMUSG00000063931.15_0	chr7	+	1868	15	FSM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTCTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	34611807	34744124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_34611880_34620753_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_7	chr7	+	1795	14	ISM	ENSMUSG00000063931.15	ENSMUST00000075068.14	1881	15	8951	9	-12	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTCTTTCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	34620754	34744124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34668929_34669006_34671081_34671129_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063931.15_9	chr7	+	1381	12	FSM	ENSMUSG00000063931.15	ENST00000397032.8	1392	12	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGGCACCCCAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	34620777	34743856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_34620938_34623805_34623934_34634106_34634171_34642063_34642112_34645011_34645074_34653982_34654028_34720389_34720459_34721117_34721196_34730767_34730917_34740095_34740281_34743114_34743307_34743655
ENSMUSG00000063952.17_0	chr17	+	2565	6	FSM	ENSMUSG00000063952.17	ENSMUST00000233088.2	2597	6	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGCTGTGGTGTGCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	29042673	29057509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29042768_29042946_29043041_29047317_29047416_29050287_29050386_29054735_29054891_29055483
ENSMUSG00000063953.4_0	chr10	-	3185	1	FSM	ENSMUSG00000063953.4	ENSMUST00000080898.4	3218	1	13	20	13	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35587875	35584690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_35584700_35587900
ENSMUSG00000063972.14_0	chr2	-	1855	10	FSM	ENSMUSG00000063972.14	ENST00000416460.6	1875	10	10	10	-5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTGAAGATGTTTAATGT	NA	NA	NA	NA	NA	NA	NA	NA	38816403	38617585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650430_38775207_38775250_38816129
ENSMUSG00000063972.14_5	chr2	-	1820	10	FSM	ENSMUSG00000063972.14	ENST00000344523.8	1831	10	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCAGCAGATGCATTTCC	NA	NA	NA	NA	NA	NA	NA	NA	38816389	38617618	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38617928_38619494_38619648_38621057_38621180_38628898_38629154_38630391_38630617_38632818_38632974_38638847_38638904_38650198_38650442_38775207_38775250_38816129
ENSMUSG00000064023.5_0	chr7	+	909	5	FSM	ENSMUSG00000064023.5	ENST00000391806.6	926	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATCCTGGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	43447493	43453188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43447597_43447949_43448208_43448488_43448752_43451503_43451638_43453037
ENSMUSG00000064030.16_0	chr10	+	1151	3	FSM	ENSMUSG00000064030.16	ENSMUST00000163377.10	1158	3	0	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACATGTGGTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	128583757	128602425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128583868_128601015_128601110_128601478
ENSMUSG00000064030.16_1	chr10	+	1144	3	FSM	ENSMUSG00000064030.16	ENSMUST00000065210.10	1156	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTAGATGACATGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	128584327	128602420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128584436_128601015_128601110_128601478
ENSMUSG00000064030.16_3	chr10	+	1042	2	ISM	ENSMUSG00000064030.16	ENSMUST00000218218.2	1143	4	16618	8	16618	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGACATGTGGTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	128601014	128602425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128601110_128601478
ENSMUSG00000064032.3_0	chr19	+	3285	2	FSM	ENSMUSG00000064032.3	ENSMUST00000150038.2	3332	2	38	9	38	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGCAATTTATTAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	10175769	10179739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_10175869_10176553
ENSMUSG00000064032.3_2	chr19	+	2307	2	Fusion	ENSMUSG00000036372.15_ENSMUSG00000064032.3	novel	3332	2	NA	NA	770	1650	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAATTAAAACCTAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	10176501	10181398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr19_+_10178462_10181051
ENSMUSG00000064037.14_0	chr5	+	3130	14	FSM	ENSMUSG00000064037.14	ENSMUST00000076949.13	3144	14	10	4	-2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1273	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAAGATTGGCTAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	31652094	31670244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31652228_31652861_31652956_31654654_31654695_31655683_31655751_31656610_31656649_31658197_31658277_31658455_31658551_31660734_31660781_31661255_31661403_31662296_31662380_31663536_31663577_31664817_31664909_31666642_31666751_31668175
ENSMUSG00000064043.16_0	chr17	+	7044	19	FSM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAGGTGCATTCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	47451867	47672883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47451892_47452057_47452111_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ENSMUSG00000064043.16_1	chr17	+	7014	18	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	189	7	189	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTCCTTTAGAGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	47452056	47672876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_47452111_47452749_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ENSMUSG00000064043.16_2	chr17	+	6958	17	ISM	ENSMUSG00000064043.16	ENSMUST00000190080.9	7044	19	882	9	882	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCTGTCCTTTAGAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	47452749	47672874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_47452836_47541155_47541243_47597667_47597783_47624718_47626427_47627539_47627587_47628693_47628848_47630277_47630605_47634203_47634589_47635513_47635581_47637648_47637789_47637926_47638031_47639943_47640020_47648476_47648566_47651991_47652106_47659575_47659783_47664658_47664871_47669834
ENSMUSG00000064061.14_1	chr16	-	5803	32	FSM	ENSMUSG00000064061.14	ENSMUST00000121869.8	5820	32	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGAATATCTATTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	48814518	48744601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48771905_48772524_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ENSMUSG00000064061.14_5	chr16	-	3314	31	FSM	ENSMUSG00000064061.14	ENSMUST00000114516.8	3331	31	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAGCTAATCAAACCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	48814293	48746247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_48746466_48747904_48748007_48748092_48748219_48748658_48748780_48749978_48750119_48751530_48751657_48754156_48754259_48755861_48755950_48757332_48757437_48758796_48758894_48762014_48762084_48762438_48762567_48763819_48763916_48765125_48765292_48765960_48765987_48768037_48768086_48768769_48768940_48770363_48770397_48774089_48774167_48778015_48778069_48778781_48778875_48780017_48780120_48781470_48781591_48792584_48792700_48795785_48795911_48798244_48798326_48799908_48800026_48801261_48801418_48802422_48802496_48804897_48804999_48814152
ENSMUSG00000064068.16_0	chr3	-	1514	8	FSM	ENSMUSG00000064068.16	ENSMUST00000239452.2	1522	8	0	8	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGGGATCAAAGAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89121642	89116395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89117890_89117984_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064068.16_2	chr3	-	1414	7	FSM	ENSMUSG00000064068.16	ENSMUST00000118964.10	1445	7	24	7	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTAACTGGGATCAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	89121640	89116400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_89116729_89116811_89116967_89117413_89117491_89117572_89117756_89119989_89120070_89120183_89120254_89121119
ENSMUSG00000064080.13_0	chr6	+	4623	17	FSM	ENSMUSG00000064080.13	ENSMUST00000113498.9	4644	17	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTTATTCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91189448	91249512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_23	chr6	+	3649	17	FSM	ENSMUSG00000064080.13	ENST00000404922.8	3665	17	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGACATGTCAGGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	91210069	91248860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233865_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064080.13_8	chr6	+	4769	18	FSM	ENSMUSG00000064080.13	ENSMUST00000041544.8	4786	18	7	10	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGTTATTCAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	91189443	91249512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91189883_91210044_91211334_91227839_91227952_91229425_91229556_91231422_91231604_91233216_91233427_91233861_91233976_91234706_91234809_91236611_91236753_91240320_91240456_91241680_91241819_91242699_91242844_91242937_91243067_91243296_91243423_91245519_91245637_91246069_91246199_91246945_91247070_91248503
ENSMUSG00000064090.15_0	chr11	-	1668	12	FSM	ENSMUSG00000064090.15	ENST00000340157.9	1688	12	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	6246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATTAAAATAGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	26541717	26421270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_26421787_26426566_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586
ENSMUSG00000064090.15_17	chr11	-	1871	13	FSM	ENSMUSG00000064090.15	ENSMUST00000078362.13	1889	13	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTAAACAACTTTTAAG	NA	NA	NA	NA	NA	NA	NA	NA	26543908	26421409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_26421787_26426553_26426701_26433157_26433325_26436959_26437019_26439772_26439894_26448916_26449050_26484210_26484304_26485536_26485643_26497838_26497927_26499294_26499365_26500025_26500076_26541586_26541728_26543589
ENSMUSG00000064105.14_1	chr19	+	4937	8	FSM	ENSMUSG00000064105.14	ENSMUST00000099373.12	4955	8	15	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGAGATGAAGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	46750049	46868628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46860094_46860161_46865646_46865832_46866271
ENSMUSG00000064105.14_6	chr19	+	3048	7	FSM	ENSMUSG00000064105.14	ENSMUST00000077666.6	3051	7	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGATCATGTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	46750045	46866801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46751833_46842339_46842484_46845274_46845413_46847381_46847552_46856976_46857071_46865646_46865832_46866271
ENSMUSG00000064115.14_2	chr16	-	1298	10	FSM	ENSMUSG00000064115.14	ENST00000405615.2	1304	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATTCAGGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	66750218	66459984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_66460098_66461266_66461393_66528270_66528391_66544084_66544264_66568492_66568584_66581603_66581775_66609617_66609756_66612196_66612350_66679620_66679771_66750161
ENSMUSG00000064115.14_3	chr16	-	1238	9	ISM	ENSMUSG00000064115.14	ENST00000405615.2	1304	10	70451	6	70451	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAAAATTCAGGCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	66679767	66459984	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_66460098_66461266_66461393_66528270_66528391_66544084_66544264_66568492_66568584_66581603_66581775_66609617_66609756_66612196_66612350_66679620
ENSMUSG00000064120.15_0	chr17	+	2632	11	FSM	ENSMUSG00000064120.15	ENSMUST00000024797.16	2646	11	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGGATTGGGGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	49735402	49762457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_49735593_49740197_49740325_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49759822_49759886_49761057
ENSMUSG00000064120.15_2	chr17	+	1728	9	FSM	ENSMUSG00000064120.15	ENST00000373195.7	1740	9	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGCCACACTCTCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	49735475	49761816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_49735593_49742122_49742291_49746449_49746615_49756127_49756190_49756462_49756575_49756776_49756890_49757289_49757401_49759238_49759360_49761057
ENSMUSG00000064127.14_0	chrX	-	6955	31	FSM	ENSMUSG00000064127.14	ENSMUST00000096495.11	6963	31	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAACTACCAACTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	12628312	12541615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_12543891_12546482_12546676_12547010_12547137_12550216_12550325_12550423_12550604_12551954_12552191_12553257_12553441_12555567_12555700_12559823_12559936_12562391_12562530_12569451_12569722_12569989_12570143_12571326_12571419_12572537_12572685_12572770_12572932_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ENSMUSG00000064127.14_2	chrX	-	2547	17	FSM	ENSMUSG00000064127.14	ENSMUST00000076016.6	2561	17	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAACTATTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	12628309	12575378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_12575480_12579821_12579899_12582185_12582321_12583100_12583296_12585829_12585990_12590021_12590101_12594252_12594379_12610955_12611068_12611984_12612136_12612863_12612997_12613707_12613816_12614087_12614217_12614657_12614788_12615402_12615577_12620345_12620452_12622667_12622695_12627705
ENSMUSG00000064128.9_0	chr14	-	4706	17	FSM	ENSMUSG00000064128.9	ENSMUST00000065302.8	4363	17	-351	8	-351	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGCATCTGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	56809654	56764225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787035_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194
ENSMUSG00000064128.9_1	chr14	-	4748	18	FSM	ENSMUSG00000064128.9	ENSMUST00000225951.2	4756	18	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGCATCTGTTTTACAT	NA	NA	NA	NA	NA	NA	NA	NA	56812839	56764225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_56764569_56767144_56767266_56767346_56767432_56767506_56767648_56769692_56769807_56770032_56770098_56772212_56772298_56772807_56773051_56780221_56780388_56786880_56787035_56789379_56791007_56791116_56791220_56792546_56792659_56796029_56796294_56801409_56801534_56802125_56802625_56809194_56809659_56812801
ENSMUSG00000064138.15_1	chr13	+	3877	10	FSM	ENSMUSG00000064138.15	ENSMUST00000091459.12	3892	10	10	5	6	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAGCAACTGTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	77856818	78314349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_77856973_77907546_77907649_77909956_77910058_77973441_77973508_77982628_77982821_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUSG00000064138.15_5	chr13	+	919	8	FSM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGAGCGCGCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	77890933	78311766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_77891006_77907546_77907649_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUSG00000064138.15_6	chr13	+	846	7	ISM	ENSMUSG00000064138.15	ENST00000509739.5	928	8	16617	6	16617	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGAGCGCGCAGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	77907547	78311766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_77907649_77973441_77973508_78050772_78050995_78100103_78100224_78147704_78147822_78154506_78154592_78311631
ENSMUSG00000064141.15_0	chr4	-	2338	6	FSM	ENSMUSG00000064141.15	ENSMUST00000106280.8	2362	6	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATTCACTGATTTACAG	NA	NA	NA	NA	NA	NA	NA	NA	120808877	120787338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_120788704_120791529_120791629_120792263_120792391_120804485_120804767_120806528_120806758_120808640
ENSMUSG00000064145.13_0	chr9	-	3905	16	FSM	ENSMUSG00000064145.13	ENSMUST00000013338.14	3924	16	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAAAGCCTGTGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	108526568	108480148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108482353_108482532_108482617_108484486_108484556_108485107_108485252_108485800_108485953_108486976_108486999_108487095_108487147_108488831_108488950_108490924_108491035_108492223_108492346_108493876_108494028_108494570_108494635_108497257_108497326_108521224_108521568_108522131_108522194_108526427
ENSMUSG00000064147.8_0	chr17	+	3727	14	FSM	ENSMUSG00000064147.8	ENSMUST00000233717.2	3730	14	0	3	0	1	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCTGGTGTCAACTCTG	NA	NA	NA	NA	NA	NA	NA	NA	29333118	29367951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29333210_29339815_29340035_29350437_29350547_29352611_29352787_29354159_29354307_29354788_29354880_29355240_29355337_29356952_29357147_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ENSMUSG00000064147.8_1	chr17	+	3631	13	ISM	ENSMUSG00000064147.8	ENSMUST00000233717.2	3730	14	6695	10	6695	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGGGAGACTCTGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	29339813	29367944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_29340035_29350437_29350547_29352611_29352787_29354159_29354307_29354788_29354880_29355240_29355337_29356952_29357147_29358088_29359525_29363462_29363545_29364220_29364336_29364914_29365017_29366321_29366399_29367158
ENSMUSG00000064177.9_0	chr6	-	274	3	FSM	ENSMUSG00000064177.9	ENST00000449238.6	285	3	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113698277	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113694123_113696070_113696188_113698220
ENSMUSG00000064177.9_1	chr6	-	664	5	FSM	ENSMUSG00000064177.9	ENST00000430179.5	675	5	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113698277	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113694123_113696070_113696185_113696282_113696416_113696824_113697085_113698220
ENSMUSG00000064177.9_2	chr6	-	602	4	ISM	ENSMUSG00000064177.9	ENST00000430179.5	675	5	1200	9	-238	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113697079	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113694123_113696070_113696185_113696282_113696416_113696824
ENSMUSG00000064177.9_3	chr6	-	159	2	FSM	ENSMUSG00000064177.9	ENST00000439975.6	168	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113698279	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113694123_113698220
ENSMUSG00000064177.9_4	chr6	-	100	1	ISM	ENSMUSG00000064177.9	ENSMUST00000204533.3	323	3	531	943	531	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113694122	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113694000_113694100
ENSMUSG00000064177.9_5	chr6	-	667	5	FSM	ENSMUSG00000064177.9	ENST00000457360.5	678	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGTCAAAGGTGAGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	113698279	113694024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113694123_113696070_113696188_113696282_113696416_113696824_113697085_113698220
ENSMUSG00000064177.9_7	chr6	-	212	2	ISM	ENSMUSG00000064177.9	ENSMUST00000204163.3	447	4	226	890	208	-9	internal_fragment	FALSE	canonical	NA	NA	NA	NA	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGGTGAGTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	113696182	113694022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113694123_113696070
ENSMUSG00000064177.9_9	chr6	-	605	4	ISM	ENSMUSG00000064177.9	ENSMUST00000064993.8	527	5	-236	941	-236	-7	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAAGGTGAGTCAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	113697077	113694020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_113694123_113696070_113696188_113696282_113696416_113696824
ENSMUSG00000064179.14_0	chr7	-	1021	14	FSM	ENSMUSG00000064179.14	ENSMUST00000071798.13	1027	14	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATGACTGGGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4518974	4507574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516579_4516613_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUSG00000064179.14_1	chr7	-	1048	14	FSM	ENSMUSG00000064179.14	ENSMUST00000108587.9	1059	14	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATGACTGGGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4518998	4507574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515286_4516579_4516613_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUSG00000064179.14_2	chr7	-	922	11	ISM	ENSMUSG00000064179.14	ENSMUST00000071798.13	1027	14	2136	5	529	-5	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGACTGGGAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	4516838	4507573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516579_4516613_4516809
ENSMUSG00000064179.14_21	chr7	-	851	12	ISM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	1579	6	-12	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTTAAGTTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4517379	4507667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335
ENSMUSG00000064179.14_22	chr7	-	879	13	FSM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTTAAGTTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4518958	4507667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUSG00000064179.14_23	chr7	-	795	10	ISM	ENSMUSG00000064179.14	ENSMUST00000163710.8	885	13	2120	6	529	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTTAAGTTCTTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	4516838	4507667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516809
ENSMUSG00000064179.14_3	chr7	-	981	13	ISM	ENSMUSG00000064179.14	ENSMUST00000108587.9	1059	14	1623	6	-13	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATGACTGGGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4517380	4507574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515286_4516579_4516613_4516809_4516837_4517211_4517226_4517335
ENSMUSG00000064179.14_33	chr7	-	923	13	NIC	ENSMUSG00000064179.14	novel	934	14	NA	NA	0	0	combination_of_known_splicesites	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTTCTTCAGGGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4518974	4507661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513388_4516579_4516613_4516809_4516837_4517211_4517226_4517335_4517379_4518929
ENSMUSG00000064179.14_4	chr7	-	975	13	ISM	ENSMUSG00000064179.14	ENSMUST00000071798.13	1027	14	1597	6	-10	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCATGACTGGGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	4517377	4507574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_4507800_4510381_4510423_4510520_4510612_4511472_4511583_4512009_4512124_4512556_4512635_4512950_4513068_4513315_4513380_4515263_4515283_4516579_4516613_4516809_4516837_4517211_4517226_4517335
ENSMUSG00000064181.7_0	chr10	-	2676	10	FSM	ENSMUSG00000064181.7	ENSMUST00000020375.7	2690	10	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTCTCTAGAGGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	116786278	116741695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116773301_116773561_116775105_116775387_116786164
ENSMUSG00000064181.7_7	chr10	-	1822	11	FSM	ENSMUSG00000064181.7	ENSMUST00000219109.2	1844	11	12	10	12	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGACGGAGTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	116786324	116742691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_116743024_116746029_116746100_116746186_116746287_116750001_116750115_116751748_116751878_116754666_116754871_116755478_116755557_116764093_116764190_116773301_116773561_116775105_116775387_116786164
ENSMUSG00000064193.9_0	chr2	+	1293	1	FSM	ENSMUSG00000064193.9	ENSMUST00000138679.2	1302	1	6	3	6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGCATGGACCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	80667490	80668783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_80667500_80668800
ENSMUSG00000064201.9_0	chr15	-	1747	10	FSM	ENSMUSG00000064201.9	ENST00000309680.4	1764	10	11	6	11	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	305	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCTCCAGAGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	101726529	101719707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_101720102_101720188_101720224_101721507_101721729_101722372_101722499_101722811_101722977_101723453_101723550_101724338_101724400_101724745_101724961_101725888_101726164_101726370
ENSMUSG00000064202.16_1	chr19	-	3261	12	NNC	ENSMUSG00000064202.16	novel	2638	9	NA	NA	-2073	13958	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAAGTAGAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	28891352	28856483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr19_-_28856558_28870236_28870326_28871851_28871966_28873480_28873525_28874904_28875003_28878841_28879027_28880085_28880191_28882008_28882133_28882730_28882928_28886830_28886966_28889053_28890484_28890686
ENSMUSG00000064210.8_0	chr15	+	4904	20	FSM	ENSMUSG00000064210.8	ENSMUST00000071874.8	4927	20	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAGGAGGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95688734	95872620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_95688938_95762105_95762189_95792293_95792423_95810185_95810252_95811252_95811538_95811752_95811867_95813833_95813950_95818124_95818260_95825404_95825511_95829663_95829725_95839090_95839234_95841278_95841357_95846152_95846379_95847371_95847542_95847739_95847838_95853771_95853903_95859956_95860163_95863701_95863905_95865503_95865610_95870375
ENSMUSG00000064215.14_2	chr12	+	876	6	FSM	ENSMUSG00000064215.14	ENSMUST00000066701.13	889	6	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103400483	103406498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_3	chr12	+	971	7	FSM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103400523	103406498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_103400610_103401680_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064215.14_9	chr12	+	886	6	ISM	ENSMUSG00000064215.14	ENSMUST00000085065.12	977	7	1162	0	1162	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCATTGTTCCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	103401679	103406498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_103401833_103402821_103402942_103403648_103403784_103403934_103403965_103405659_103405822_103406212
ENSMUSG00000064247.15_0	chr5	+	1336	8	FSM	ENSMUSG00000064247.15	ENSMUST00000086687.10	1346	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACGCACATGTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	110247834	110251671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110247886_110248013_110248192_110248881_110248972_110249253_110249391_110249665_110249795_110250041_110250198_110250311_110250496_110251260
ENSMUSG00000064247.15_1	chr5	+	1283	7	ISM	ENSMUSG00000064247.15	ENSMUST00000086687.10	1346	8	181	10	181	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAACGCACATGTGCGGA	NA	NA	NA	NA	NA	NA	NA	NA	110248015	110251671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_110248192_110248881_110248972_110249253_110249391_110249665_110249795_110250041_110250198_110250311_110250496_110251260
ENSMUSG00000064254.7_0	chr7	+	1470	8	FSM	ENSMUSG00000064254.7	ENSMUST00000077191.7	1484	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAATCTGAGTTCTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24286976	24308345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24287233_24293051_24293437_24293842_24293988_24294424_24294574_24305629_24305760_24307292_24307383_24307776_24307894_24308147
ENSMUSG00000064264.15_0	chr7	+	1172	3	FSM	ENSMUSG00000064264.15	ENSMUST00000071361.13	1182	3	7	3	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCGAGCTGCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24206501	24215104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24206862_24209970_24210179_24214500
ENSMUSG00000064264.15_1	chr7	+	1148	3	FSM	ENSMUSG00000064264.15	ENSMUST00000177205.2	1159	3	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTTCGAGCTGCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	24206564	24215104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24206862_24209970_24210179_24214461
ENSMUSG00000064284.13_0	chr15	-	987	5	FSM	ENSMUSG00000064284.13	ENSMUST00000071876.13	997	5	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATAAGCTGGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	85695895	85691180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102_85695250_85695839
ENSMUSG00000064284.13_1	chr15	-	927	4	FSM	ENSMUSG00000064284.13	ENSMUST00000125947.8	706	4	46	-267	46	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGATAAGCTGGTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	85695245	85691180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_85691740_85692456_85692569_85693412_85693526_85695102
ENSMUSG00000064289.16_0	chr2	+	1999	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112502.8	2016	8	11	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCATGTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	61408939	61484509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61409038_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUSG00000064289.16_3	chr2	+	2005	8	FSM	ENSMUSG00000064289.16	ENSMUST00000078074.9	2018	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCATGTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	61408936	61484509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61409038_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUSG00000064289.16_6	chr2	+	2026	8	FSM	ENSMUSG00000064289.16	ENSMUST00000112495.8	2039	8	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCATGTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	61423427	61484509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61423553_61443994_61444143_61457249_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUSG00000064289.16_9	chr2	+	2205	9	FSM	ENSMUSG00000064289.16	ENSMUST00000112501.9	2227	9	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTCATGTCTGATGG	NA	NA	NA	NA	NA	NA	NA	NA	61423456	61484509	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_61423553_61424340_61424546_61443994_61444143_61457246_61457359_61458064_61458184_61474058_61474130_61474650_61474767_61480081_61480633_61483722
ENSMUSG00000064302.14_45	chr1	+	5061	38	ISM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	29988	0	-117	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTATGTTCTTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118347172	118535073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118440434_118440459_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ENSMUSG00000064302.14_8	chr1	+	5130	39	FSM	ENSMUSG00000064302.14	ENST00000455322.6	5131	39	1	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTATGTTCTTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	118317185	118535073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_118317252_118347169_118347649_118387530_118387610_118388916_118389021_118390195_118390288_118392257_118392334_118395609_118395708_118399501_118399570_118425363_118425517_118427377_118427452_118429031_118429125_118430582_118430729_118431549_118431686_118432625_118432697_118433211_118433272_118434669_118434748_118436544_118436713_118437301_118437352_118437935_118438107_118440434_118440459_118449556_118449665_118451050_118451078_118453026_118453186_118466995_118467100_118469404_118469429_118470831_118471077_118473122_118473187_118475594_118475759_118478816_118478896_118479742_118479887_118487715_118487860_118488740_118488848_118498578_118498730_118506550_118506795_118509002_118509194_118518150_118518280_118528107_118528315_118530094_118530212_118534637
ENSMUSG00000064307.14_0	chr7	-	624	3	FSM	ENSMUSG00000064307.14	ENST00000423494.6	635	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACTTCACAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101564969	101562145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101562416_101562637_101562791_101564768
ENSMUSG00000064307.14_1	chr7	-	1216	5	FSM	ENSMUSG00000064307.14	ENST00000538413.6	1235	5	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAACTTCACAGTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101583405	101562145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101562416_101562637_101562791_101564768_101564975_101569843_101569982_101582956
ENSMUSG00000064307.14_4	chr7	-	715	4	FSM	ENSMUSG00000064307.14	ENST00000538478.5	728	4	6	7	3	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTCCCCTGTACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	101569978	101562194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101562416_101562637_101562791_101564768_101564975_101569843
ENSMUSG00000064307.14_7	chr7	-	1190	7	FSM	ENSMUSG00000064307.14	ENST00000647530.1	1200	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGATTATAAGTCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	101583214	101562203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101562416_101562637_101562791_101564768_101564975_101569843_101569982_101570710_101570794_101577803_101577915_101582927
ENSMUSG00000064317.6_0	chr10	+	442	1	FSM	ENSMUSG00000064317.6	ENSMUST00000072739.6	309	1	-6	-127	-6	127	mono-exon	FALSE	NA	NA	NA	NA	NA	257	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78229147	78229589	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_78229100_78229600
ENSMUSG00000064325.5_0	chr8	-	9054	13	FSM	ENSMUSG00000064325.5	ENSMUST00000079038.4	9074	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTTCATGTTCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	80784622	80692488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_80699156_80701623_80701773_80713564_80713647_80715876_80716008_80716874_80716999_80719102_80719225_80723351_80723496_80724083_80724258_80724787_80724940_80770574_80770777_80771679_80771837_80778056_80778250_80783865
ENSMUSG00000064326.14_0	chr12	+	907	4	FSM	ENSMUSG00000064326.14	ENSMUST00000021728.12	924	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1664	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCACAAGGACTCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112611122	112615572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112611519_112613271_112613467_112614258_112614416_112615413
ENSMUSG00000064330.10_0	chr6	+	5912	4	FSM	ENSMUSG00000064330.10	ENSMUST00000137768.2	5940	4	4	24	4	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAATATTTGAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	136931524	136945839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_136931578_136936223_136936393_136938162_136938204_136940190
ENSMUSG00000064330.10_2	chr6	+	5874	3	ISM	ENSMUSG00000064330.10	ENSMUST00000137768.2	5940	4	4702	10	-36	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATAAAACTAGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	136936222	136945853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_136936393_136938162_136938204_136940190
ENSMUSG00000064337.1_0	chrM	+	949	1	FSM	ENSMUSG00000064337.1	ENSMUST00000082388.1	955	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATCATAGTGTAGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	69	1018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_100_1000
ENSMUSG00000064339.1_0	chrM	+	1570	1	FSM	ENSMUSG00000064339.1	ENSMUST00000082390.1	1582	1	4	8	4	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	325	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGTTATTAGGGTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	1097	2667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_1100_2700
ENSMUSG00000064341.1_0	chrM	+	942	1	FSM	ENSMUSG00000064341.1	ENSMUST00000082392.1	957	1	5	10	5	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACATATAGAAATATGTCT	NA	NA	NA	NA	NA	NA	NA	NA	2755	3697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_2800_3700
ENSMUSG00000064345.1_0	chrM	+	1024	1	FSM	ENSMUSG00000064345.1	ENSMUST00000082396.1	1038	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTAGAAGTTTAGGATATA	NA	NA	NA	NA	NA	NA	NA	NA	3921	4945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_3900_4900
ENSMUSG00000064351.1_0	chrM	+	1523	1	FSM	ENSMUSG00000064351.1	ENSMUST00000082402.1	1545	1	9	13	9	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	964	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAATAAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	5336	6859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_5300_6900
ENSMUSG00000064354.1_0	chrM	+	666	1	FSM	ENSMUSG00000064354.1	ENSMUST00000082405.1	684	1	8	10	8	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTAATTTCACTATG	NA	NA	NA	NA	NA	NA	NA	NA	7020	7686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_7000_7700
ENSMUSG00000064357.1_0	chrM	+	661	1	FSM	ENSMUSG00000064357.1	ENSMUST00000082408.1	681	1	6	14	6	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAATACATAATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	7932	8593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_7900_8600
ENSMUSG00000064358.1_0	chrM	+	769	1	FSM	ENSMUSG00000064358.1	ENSMUST00000082409.1	784	1	10	5	10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTACTCCCTTAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	8616	9385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_8600_9400
ENSMUSG00000064360.1_0	chrM	+	300	1	FSM	ENSMUSG00000064360.1	ENSMUST00000082411.1	348	1	38	10	38	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGAGTAAATGGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	9496	9796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_9500_9800
ENSMUSG00000064363.1_0	chrM	+	1349	1	FSM	ENSMUSG00000064363.1	ENSMUST00000082414.1	1378	1	22	7	22	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATATGTGAATATAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	10188	11537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_10200_11500
ENSMUSG00000064367.1_0	chrM	+	1806	1	FSM	ENSMUSG00000064367.1	ENSMUST00000082418.1	1824	1	13	5	13	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAATCTCGATAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11754	13560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_11800_13600
ENSMUSG00000064368.1_0	chrM	-	509	1	FSM	ENSMUSG00000064368.1	ENSMUST00000082419.1	519	1	3	7	3	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTAATTGAGTATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	14067	13558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_-_13600_14100
ENSMUSG00000064370.1_0	chrM	+	1129	1	FSM	ENSMUSG00000064370.1	ENSMUST00000082421.1	1144	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCCATGTCTTGATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	14151	15280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrM_+_14200_15300
ENSMUSG00000064373.14_0	chr15	+	1997	5	FSM	ENSMUSG00000064373.14	ENSMUST00000082424.12	2013	5	6	10	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTCAAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3300254	3309980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_3300308_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_1	chr15	+	2066	5	FSM	ENSMUSG00000064373.14	ENSMUST00000159216.10	2085	5	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTCAAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	3300412	3309980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_3300535_3304142_3304359_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_3	chr15	+	1579	4	FSM	ENSMUSG00000064373.14	ENST00000506577.5	1587	4	8	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTCTTACATTCTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	3304148	3309617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_3304363_3305048_3305262_3306638_3306757_3308583
ENSMUSG00000064373.14_4	chr15	+	703	2	FSM	ENSMUSG00000064373.14	ENST00000507920.5	720	2	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAGGTCACCTCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	3304155	3309079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_3304363_3308583
ENSMUSG00000064722.3_0	chr2	-	122	1	FSM	ENSMUSG00000064722.3	ENSMUST00000082788.3	129	1	1	6	1	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATTTTGGAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119571436	119571314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119571300_119571400
ENSMUSG00000064841.3_0	chr5	+	128	1	FSM	ENSMUSG00000064841.3	ENSMUST00000082907.3	134	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGAGCCTCGAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	121343072	121343200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121343100_121343200
ENSMUSG00000065374.3_0	chr14	-	128	1	FSM	ENSMUSG00000065374.3	ENSMUST00000083440.3	147	1	13	6	13	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTCTCCCCTAAAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	58068653	58068525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_58068500_58068700
ENSMUSG00000065954.12_0	chr8	-	6462	11	FSM	ENSMUSG00000065954.12	ENSMUST00000084512.11	6471	11	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGGGGTGTGTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25691457	25644568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25691137
ENSMUSG00000065954.12_1	chr8	-	7777	13	FSM	ENSMUSG00000065954.12	ENSMUST00000084030.6	7788	13	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCGGGGTGTGTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	25691548	25644568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25691137
ENSMUSG00000065954.12_26	chr8	-	2447	13	FSM	ENSMUSG00000065954.12	ENST00000520973.5	2459	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCTGCGCTGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25690786	25649614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665157_25665282_25667949_25668011_25671838_25672947_25690106_25690223_25690659
ENSMUSG00000065954.12_27	chr8	-	1206	10	FSM	ENSMUSG00000065954.12	ENST00000520611.1	1211	10	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCTGCGCTGCCGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	25671919	25649614	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_25649837_25651210_25651332_25654404_25654512_25655476_25655638_25657377_25657422_25657530_25657608_25659212_25659339_25661287_25661341_25665067_25665282_25671838
ENSMUSG00000065979.13_0	chr16	-	2638	4	FSM	ENSMUSG00000065979.13	ENSMUST00000096272.11	2663	4	12	13	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11727275	11621597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11623448_11646038_11646462_11705441_11705661_11727129
ENSMUSG00000065979.13_1	chr16	-	2605	4	FSM	ENSMUSG00000065979.13	ENSMUST00000121750.2	2614	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	11727284	11621597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11623448_11646038_11646462_11705441_11705619_11727129
ENSMUSG00000065979.13_3	chr16	-	1907	3	FSM	ENSMUSG00000065979.13	ENSMUST00000073371.7	1922	3	15	0	-7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTACATTGCTTCTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	11727294	11702086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_11703610_11705441_11705661_11727129
ENSMUSG00000065990.13_0	chr4	+	1150	4	FSM	ENSMUSG00000065990.13	ENSMUST00000084097.12	1159	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGAACCCAGGGCCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	155915816	155917587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155916193_155916439_155916528_155916808_155917255_155917347
ENSMUSG00000065990.13_1	chr4	+	1010	3	FSM	ENSMUSG00000065990.13	ENSMUST00000105592.8	1029	3	9	10	-1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGACTCAATTATTCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	155916124	155917508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155916528_155916808_155917255_155917347
ENSMUSG00000065990.13_2	chr4	+	767	4	FSM	ENSMUSG00000065990.13	ENSMUST00000105591.2	773	4	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCACTATAATAAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	155916130	155917487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155916224_155916439_155916528_155916808_155917255_155917347
ENSMUSG00000065999.14_0	chr4	+	2749	6	FSM	ENSMUSG00000065999.14	ENSMUST00000081742.7	2762	6	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATTCAACAAGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	147637795	147669642	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_147637884_147646898_147646979_147647371_147647416_147661528_147661587_147665698_147665826_147667290
ENSMUSG00000066026.15_4	chr4	+	2321	6	FSM	ENSMUSG00000066026.15	ENSMUST00000154208.8	2337	6	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	642	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAGAGCAGTGTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	144619659	144654776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_144620280_144645220_144645365_144645954_144646075_144646410_144646650_144650475_144650602_144653704
ENSMUSG00000066036.15_0	chr4	+	15783	106	FSM	ENSMUSG00000066036.15	ENSMUST00000165860.8	15798	106	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTGGAAAGGGGTCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	139107977	139216834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139159792_139159826_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ENSMUSG00000066036.15_3	chr4	+	15919	106	FSM	ENSMUSG00000066036.15	ENSMUST00000097822.10	15928	106	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACACACCAGGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	139107974	139216895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139108174_139115678_139115777_139118150_139118255_139119095_139119226_139119330_139119471_139120094_139120198_139120327_139120470_139120605_139120731_139123867_139123993_139124463_139124524_139124604_139124796_139126872_139126973_139127107_139127246_139127635_139127754_139128591_139128780_139129819_139129980_139130057_139130144_139133789_139133960_139135023_139135307_139135850_139135987_139136149_139136230_139136983_139137113_139137398_139137582_139137717_139137841_139137932_139138163_139139936_139140059_139140722_139140821_139141653_139141812_139142310_139142521_139143863_139143966_139144166_139144268_139144501_139144701_139145712_139145902_139146478_139146543_139147689_139147882_139148391_139148463_139148541_139148690_139149007_139149236_139149703_139149875_139151137_139151321_139152070_139152230_139152523_139152677_139153009_139153238_139154088_139154247_139155345_139155518_139155800_139156003_139156802_139156967_139157434_139157652_139158855_139159073_139160930_139160995_139161304_139161440_139162320_139162496_139163432_139163571_139164383_139164506_139165360_139165473_139167721_139167853_139167955_139168134_139168502_139168608_139169996_139170135_139170709_139170885_139171905_139172003_139172554_139172663_139173169_139173287_139174169_139174380_139176132_139176283_139177625_139177854_139178556_139178636_139179038_139179285_139179881_139180051_139180445_139180591_139181282_139181369_139182477_139182566_139182758_139182953_139184842_139185083_139185405_139185545_139186109_139186236_139186336_139186466_139187309_139187654_139189138_139189230_139189488_139189574_139189712_139189841_139190590_139190721_139190808_139190967_139191295_139191406_139191852_139191995_139192269_139192352_139192604_139192779_139194523_139194646_139195316_139195515_139196100_139196182_139196986_139197075_139197509_139197638_139198615_139198724_139199042_139199163_139199782_139199974_139200381_139200556_139200847_139200948_139203441_139203661_139204438_139204553_139206228_139206372_139206760_139206887_139207952_139208148_139209768_139209994_139212595_139212687_139213295_139213459_139216477
ENSMUSG00000066037.15_0	chr4	+	2527	10	FSM	ENSMUSG00000066037.15	ENSMUST00000131671.8	2543	10	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	136038259	136067983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_2	chr4	+	2667	11	FSM	ENSMUSG00000066037.15	ENSMUST00000105850.8	2683	11	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATCACCTATTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	136038285	136067983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136038401_136041400_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_3	chr4	+	21437	11	FSM	ENSMUSG00000066037.15	ENSMUST00000148843.10	21452	11	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCATTGGGTGTTGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	136038287	136086752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136038401_136041397_136041567_136043671_136043791_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_5	chr4	+	1823	9	FSM	ENSMUSG00000066037.15	ENST00000606561.5	1832	9	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGCTGAAGAAGTCACT	NA	NA	NA	NA	NA	NA	NA	NA	136038320	136067454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136038401_136043671_136043791_136044394_136044503_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066037.15_6	chr4	+	2637	10	FSM	ENSMUSG00000066037.15	ENSMUST00000084219.12	2647	10	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCATTTCATTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	136038338	136068167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136038401_136043671_136043796_136044394_136044503_136046704_136046819_136054546_136054724_136056676_136056813_136059708_136059915_136063608_136063759_136066486_136066609_136066729
ENSMUSG00000066042.5_0	chr4	-	1643	3	FSM	ENSMUSG00000066042.5	ENSMUST00000102567.4	1675	3	19	13	19	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGAAAAGACTCAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	132191213	132186054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132187425_132190175_132190320_132191084
ENSMUSG00000066043.14_0	chr4	-	4599	14	FSM	ENSMUSG00000066043.14	ENSMUST00000102568.10	4614	14	0	15	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATCAAAAAAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	132149800	132083248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132110592_132110674_132114202_132114377_132140380_132140435_132149655
ENSMUSG00000066043.14_1	chr4	-	4468	13	FSM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATCAAAAAAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	132149750	132083248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380_132140435_132149655
ENSMUSG00000066043.14_2	chr4	-	4374	12	ISM	ENSMUSG00000066043.14	ENSMUST00000084170.12	4483	13	9322	8	9322	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATCAAAAAAACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	132140435	132083248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_132085596_132087785_132087863_132088888_132089027_132091041_132091104_132092885_132092942_132095212_132095367_132097044_132097227_132097836_132098432_132104490_132104866_132105715_132105875_132114202_132114377_132140380
ENSMUSG00000066057.8_0	chr17	-	1836	4	FSM	ENSMUSG00000066057.8	ENSMUST00000182639.2	1853	4	14	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCGGCCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	95142213	95067374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_95069006_95126322_95126373_95127763_95127825_95142119
ENSMUSG00000066057.8_1	chr17	-	1743	3	ISM	ENSMUSG00000066057.8	ENSMUST00000182639.2	1853	4	14402	3	14401	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTGTCGGCCTCATTTG	NA	NA	NA	NA	NA	NA	NA	NA	95127825	95067374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_95069006_95126322_95126373_95127763
ENSMUSG00000066113.17_0	chr4	+	7774	29	FSM	ENSMUSG00000066113.17	ENSMUST00000141889.8	7805	29	24	7	-23	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAATCATAGTGTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	85972188	86346615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_85972358_86005945_86006074_86029053_86029100_86074871_86075109_86117512_86117640_86130861_86130937_86135152_86135311_86146179_86146292_86150789_86150929_86161953_86162005_86166207_86166413_86167999_86168148_86170992_86171078_86195107_86195410_86207955_86208086_86240270_86240407_86255074_86255255_86259301_86259456_86260266_86261393_86274571_86274700_86293088_86293218_86303700_86303905_86306650_86306786_86331823_86332037_86333707_86333889_86336708_86336917_86341593_86341704_86342396_86342618_86344078
ENSMUSG00000066113.17_2	chr4	+	945	5	FSM	ENSMUSG00000066113.17	ENSMUST00000120678.2	977	5	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGCCATGAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85972235	86117924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_85972358_86005945_86006074_86029053_86029100_86074871_86075109_86117512
ENSMUSG00000066148.4_0	chr4	+	5205	14	FSM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATCTCTGACAGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	62327046	62345222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62327139_62327811_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ENSMUSG00000066148.4_3	chr4	+	5114	13	ISM	ENSMUSG00000066148.4	ENSMUST00000084524.4	5223	14	777	5	777	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATCTCTGACAGCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	62327810	62345222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_62327990_62329932_62330120_62332779_62332868_62333411_62333492_62333638_62333733_62334200_62334296_62334888_62334948_62336082_62336207_62337512_62337603_62340414_62340538_62340651_62340760_62340839_62340959_62341454
ENSMUSG00000066149.12_0	chr4	-	806	4	FSM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGAGACGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62326872	62312825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62313259_62320960_62321153_62322692_62322790_62326788
ENSMUSG00000066149.12_1	chr4	-	724	3	ISM	ENSMUSG00000066149.12	ENSMUST00000084525.12	819	4	4088	6	4071	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGTGAGACGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62322791	62312825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_62313259_62320960_62321153_62322692
ENSMUSG00000066150.13_0	chr4	+	3702	5	FSM	ENSMUSG00000066150.13	ENSMUST00000084526.12	3718	5	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	942	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGCATGTCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	62278973	62310000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62279081_62303728_62303916_62304327_62304401_62306103_62306273_62306834
ENSMUSG00000066151.13_0	chr4	-	4255	28	FSM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGTTGTGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62278702	62218582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUSG00000066151.13_1	chr4	-	4160	27	ISM	ENSMUSG00000066151.13	ENSMUST00000084527.10	4264	28	7924	4	7924	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGACTGTTGTGTTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62270783	62218582	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_62219228_62221397_62221495_62222427_62223144_62223359_62223468_62224146_62224267_62225131_62225285_62226174_62226331_62230494_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669
ENSMUSG00000066151.13_6	chr4	-	3326	21	FSM	ENSMUSG00000066151.13	ENSMUST00000084528.10	3329	21	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAAGGCCAGCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	62278782	62229508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62230632_62232490_62232663_62239195_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUSG00000066151.13_7	chr4	-	2335	19	FSM	ENSMUSG00000066151.13	ENSMUST00000107461.2	2337	19	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAGAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62278769	62238878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_62239299_62240419_62240515_62241433_62241542_62242348_62242459_62244295_62244411_62246049_62246157_62247584_62247688_62250427_62250536_62251919_62251978_62252357_62252498_62254637_62254785_62255293_62255363_62256722_62256873_62258470_62258570_62258858_62258934_62263744_62263815_62264293_62264379_62270669_62270783_62278606
ENSMUSG00000066152.12_0	chr4	+	1797	4	FSM	ENSMUSG00000066152.12	ENSMUST00000084530.9	1820	4	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTCTGTGTTTGTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62204701	62216641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_62204812_62210868_62210936_62214123_62214314_62215211
ENSMUSG00000066178.5_0	chr4	+	1707	1	FSM	ENSMUSG00000066178.5	ENSMUST00000084593.3	1728	1	16	5	16	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACATGACCAGATAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	136189576	136191283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136189600_136191300
ENSMUSG00000066180.6_0	chr7	-	478	1	FSM	ENSMUSG00000066180.6	ENSMUST00000084598.6	483	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTAATGGACACAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	125899088	125898610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_125898600_125899100
ENSMUSG00000066196.12_0	chr4	-	1181	6	FSM	ENSMUSG00000066196.12	ENST00000484764.5	1194	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCATTGATTCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	43653114	43651328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_43651655_43651746_43651792_43651927_43652043_43652116_43652163_43652344_43652520_43652640
ENSMUSG00000066232.5_0	chr7	+	4743	25	FSM	ENSMUSG00000066232.5	ENSMUST00000084731.5	4763	25	7	13	7	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTAAGAAAACCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	109617487	109655803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109617716_109626277_109626360_109628897_109629052_109630814_109630974_109636150_109636308_109638370_109638461_109639812_109639908_109640019_109640105_109641187_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109650219_109650441_109650528_109650735_109651917_109652125_109653206_109653324_109654223
ENSMUSG00000066232.5_11	chr7	+	1682	14	ISM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	736	9	736	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTGAGTTTCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	109642001	109654312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917_109652176_109653206_109653324_109654223
ENSMUSG00000066232.5_8	chr7	+	1746	15	FSM	ENSMUSG00000066232.5	ENST00000451446.1	1757	15	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAATTGAGTTTCCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	109641267	109654312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109641323_109641992_109642093_109643615_109643693_109643824_109643942_109645368_109645459_109645884_109646051_109646193_109646355_109647335_109647465_109648000_109648068_109648151_109648278_109648802_109648901_109649986_109650083_109651917_109652176_109653206_109653324_109654223
ENSMUSG00000066233.7_0	chr9	+	1024	3	FSM	ENSMUSG00000066233.7	ENSMUST00000084733.7	1041	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	236	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTAAAGCTACTGGATAT	NA	NA	NA	NA	NA	NA	NA	NA	122850399	122852544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_122850636_122851230_122851378_122851903
ENSMUSG00000066235.8_0	chr9	-	2347	2	FSM	ENSMUSG00000066235.8	ENSMUST00000084743.7	2365	2	12	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCCCAAGTCTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	121825079	121810680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121812890_121824941
ENSMUSG00000066235.8_1	chr9	-	2466	4	FSM	ENSMUSG00000066235.8	ENSMUST00000216669.2	2504	4	28	10	28	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACATCTTGCCCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	121825047	121810686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121812890_121823910_121824017_121824132_121824184_121824941
ENSMUSG00000066263.11_0	chr7	-	6563	2	FSM	ENSMUSG00000066263.11	ENSMUST00000215653.2	6570	2	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTGCTGACTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	103666507	103655441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103661936_103666438
ENSMUSG00000066263.11_1	chr7	-	6471	1	FSM	ENSMUSG00000066263.11	ENSMUST00000106862.3	1020	1	45	-5496	45	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCATTGCTGACTGGATT	NA	NA	NA	NA	NA	NA	NA	NA	103661912	103655441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103655400_103661900
ENSMUSG00000066278.7_0	chr5	-	2501	4	FSM	ENSMUSG00000066278.7	ENSMUST00000040967.9	2522	4	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCAGTTTGCTGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	124170319	124142710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_124144802_124145671_124145755_124148750_124148923_124170164
ENSMUSG00000066306.14_0	chr7	+	7161	25	FSM	ENSMUSG00000066306.14	ENSMUST00000084852.13	7180	25	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTAAGCTCTTTGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	101619040	101664165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101619177_101626586_101626658_101636932_101637019_101639779_101639860_101640852_101640936_101641844_101641926_101642431_101642520_101643869_101643988_101644603_101644762_101645024_101645143_101645229_101645348_101645641_101645783_101647281_101647405_101647506_101650867_101656692_101656762_101658297_101658418_101658500_101658720_101658823_101658982_101660039_101660287_101661087_101661317_101661948_101662086_101662375_101662553_101662736_101662854_101662944_101663149_101663442
ENSMUSG00000066315.10_0	chr4	+	694	1	FSM	ENSMUSG00000066315.10	ENSMUST00000120234.2	636	1	-27	-31	-27	31	mono-exon	FALSE	NA	NA	NA	NA	NA	764	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAAAGCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10848392	10849086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_10848400_10849100
ENSMUSG00000066324.3_0	chr4	-	6518	5	FSM	ENSMUSG00000066324.3	ENSMUST00000084949.3	6543	5	17	8	17	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGTTCCTATGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	4793338	4762491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_4767973_4769311_4769474_4776313_4776410_4778192_4778356_4792722
ENSMUSG00000066357.7_0	chr9	-	4143	6	FSM	ENSMUSG00000066357.7	ENSMUST00000068700.7	4163	6	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	646	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTTCTGTGCCTTAC	NA	NA	NA	NA	NA	NA	NA	NA	108455925	108449516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108450613_108450687_108450807_108450892_108451010_108451103_108451200_108451299_108453782_108455692
ENSMUSG00000066362.6_0	chr8	+	517	1	FSM	ENSMUSG00000066362.6	ENSMUST00000183478.2	538	1	5	16	5	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	87774321	87774838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_87774300_87774800
ENSMUSG00000066392.13_0	chr12	+	2445	8	FSM	ENSMUSG00000066392.13	ENST00000676811.1	2466	8	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACACATACGATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	89780048	90299328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250425_90289233_90289416_90298258
ENSMUSG00000066392.13_5	chr12	+	3183	8	FSM	ENSMUSG00000066392.13	ENST00000555387.1	3225	8	11	31	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAACAAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89780151	90299636	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_89780411_89943114_89943297_90135693_90135866_90165920_90166011_90171284_90171593_90250345_90250434_90288709_90289416_90298258
ENSMUSG00000066406.17_0	chr7	+	12585	38	FSM	ENSMUSG00000066406.17	ENSMUST00000207750.2	12597	38	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATCTTGACCTCTGCCGTG	NA	NA	NA	NA	NA	NA	NA	NA	75105284	75404348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261297_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75329567_75329622_75333141_75333208_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ENSMUSG00000066406.17_18	chr7	+	4780	29	FSM	ENSMUSG00000066406.17	ENST00000394510.6	4800	29	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAACACAAGCAGACTCAA	NA	NA	NA	NA	NA	NA	NA	NA	75293001	75400725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75293213_75313159_75313236_75316259_75316397_75326853_75327228_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369879_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ENSMUSG00000066406.17_2	chr7	+	12524	37	FSM	ENSMUSG00000066406.17	ENSMUST00000166315.7	12543	37	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGACCTCTGCCGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75105293	75404350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75105497_75184555_75184600_75219631_75219780_75229249_75229547_75235904_75236089_75252533_75252727_75258232_75261309_75264668_75264797_75313159_75313236_75316259_75316397_75326853_75327228_75329567_75329622_75334864_75335058_75336960_75337070_75345371_75345415_75347049_75347183_75354112_75354288_75367517_75367586_75369876_75369944_75373532_75373669_75375047_75375161_75375715_75375869_75376717_75376969_75378543_75378670_75378781_75378900_75380110_75380360_75385460_75385538_75386033_75386216_75386355_75386439_75389113_75389309_75392383_75392546_75393213_75393285_75393712_75393758_75396507_75396559_75397325_75397776_75398927_75399259_75400321
ENSMUSG00000066407.4_0	chr13	+	296	1	FSM	ENSMUSG00000066407.4	ENSMUST00000085163.4	300	1	-14	18	-14	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAGCATTTATATTAA	NA	NA	NA	NA	NA	NA	NA	NA	73465948	73466244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_73465900_73466200
ENSMUSG00000066415.5_0	chr9	+	4853	2	FSM	ENSMUSG00000066415.5	ENSMUST00000085177.5	4889	2	24	12	24	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTTAAACAAATGAGTAGA	NA	NA	NA	NA	NA	NA	NA	NA	100956838	100981987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100957474_100977769
ENSMUSG00000066441.15_0	chr12	-	3245	7	FSM	ENSMUSG00000066441.15	ENSMUST00000161204.8	3262	7	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAAATTAGTTTATGG	NA	NA	NA	NA	NA	NA	NA	NA	79239060	79221120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_79223025_79229426_79229617_79231897_79232108_79233187_79233293_79235254_79235411_79235762_79235882_79238499
ENSMUSG00000066441.15_8	chr12	-	922	5	FSM	ENSMUSG00000066441.15	ENST00000428130.6	933	5	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAACTCCCCCTAACCAG	NA	NA	NA	NA	NA	NA	NA	NA	79235872	79222663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_79223025_79229426_79229617_79233187_79233293_79235254_79235411_79235762
ENSMUSG00000066442.18_0	chr9	+	798	3	FSM	ENSMUSG00000066442.18	ENSMUST00000085256.8	816	3	3	15	3	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATCAATAGAAATTATT	NA	NA	NA	NA	NA	NA	NA	NA	89093212	89122278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_89093365_89097261_89097524_89121894
ENSMUSG00000066443.6_0	chr9	+	471	1	FSM	ENSMUSG00000066443.6	ENSMUST00000155008.2	481	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTACACAAAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	88272899	88273370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_88272900_88273400
ENSMUSG00000066456.15_0	chr9	-	855	6	FSM	ENSMUSG00000066456.15	ENSMUST00000161796.9	862	6	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83028651	82992000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_82992483_82993086_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000066456.15_3	chr9	-	1387	5	FSM	ENSMUSG00000066456.15	ENSMUST00000185315.7	1391	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83028579	82992000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000066456.15_5	chr9	-	973	6	FSM	ENSMUSG00000066456.15	ENSMUST00000162246.9	983	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATCCACCTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	83028728	82992000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_82992483_82993045_82993160_82994272_82994324_82996825_82996856_83002425_83002477_83028483
ENSMUSG00000066551.13_0	chr5	-	2825	5	FSM	ENSMUSG00000066551.13	ENSMUST00000085546.13	2838	5	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACGTCTTTGTAACT	NA	NA	NA	NA	NA	NA	NA	NA	148989839	148983513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397_148987562_148989709
ENSMUSG00000066551.13_4	chr5	-	1700	4	FSM	ENSMUSG00000066551.13	ENSMUST00000110505.8	1720	4	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTATTGTTGTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	148988094	148985041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148985724_148986536_148986712_148987104_148987251_148987397
ENSMUSG00000066568.13_0	chr7	-	2924	11	FSM	ENSMUSG00000066568.13	ENSMUST00000085585.12	2944	11	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATTTCAATATTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	34089103	34044081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ENSMUSG00000066568.13_10	chr7	-	1358	9	ISM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	7	5351	7	-5351	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATAGCTGCATGCTG	NA	NA	NA	NA	NA	NA	NA	NA	34088896	34050710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ENSMUSG00000066568.13_3	chr7	-	2118	10	FSM	ENSMUSG00000066568.13	ENST00000540746.6	2144	10	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTCAGCAAACATACGTG	NA	NA	NA	NA	NA	NA	NA	NA	34089016	34044677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34045384_34047350_34047408_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34070479_34070610_34074653_34074818_34088782
ENSMUSG00000066568.13_5	chr7	-	1375	10	FSM	ENSMUSG00000066568.13	ENST00000403062.2	1389	10	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCTACAAACAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	34088893	34045363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_34045384_34050710_34050943_34052814_34052987_34053089_34053273_34056858_34056922_34057190_34057368_34065039_34065163_34070479_34070610_34074653_34074818_34088782
ENSMUSG00000066571.14_0	chr7	-	6212	14	FSM	ENSMUSG00000066571.14	ENSMUST00000108074.8	6224	14	1	11	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATAATACTCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	34012975	33936142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126_33985379_34012911
ENSMUSG00000066571.14_1	chr7	-	6142	13	FSM	ENSMUSG00000066571.14	ENSMUST00000085592.6	5798	13	-348	4	-348	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAATAATACTCTGTATC	NA	NA	NA	NA	NA	NA	NA	NA	33985372	33936142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_33938663_33939168_33939248_33939933_33940072_33941664_33941831_33944390_33945404_33947531_33947658_33953411_33953510_33955836_33955996_33956771_33956934_33957056_33957153_33957437_33957579_33962977_33963176_33984126
ENSMUSG00000066595.10_0	chr1	-	4004	10	FSM	ENSMUSG00000066595.10	ENSMUST00000085635.6	4040	10	28	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTAATTTTATATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	190758327	190738051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190740408_190740564_190740633_190741745_190741861_190743384_190743491_190743732_190743844_190744335_190744440_190745560_190745629_190747554_190747696_190753272_190753454_190757573
ENSMUSG00000066607.6_0	chr9	+	2129	3	FSM	ENSMUSG00000066607.6	ENSMUST00000085658.5	2139	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATATTTAAACAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	58395885	58407015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58396523_58396951_58397676_58406247
ENSMUSG00000066607.6_1	chr9	+	1586	2	FSM	ENSMUSG00000066607.6	ENSMUST00000216294.2	1601	2	5	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACTTAAGGATCCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	58396895	58407053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58397676_58406247
ENSMUSG00000066613.15_0	chr5	+	2061	4	FSM	ENSMUSG00000066613.15	ENSMUST00000112540.8	2081	4	11	9	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110144397	110158268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110144500_110154809_110154937_110155121_110155183_110156497
ENSMUSG00000066621.13_0	chr5	-	5093	25	FSM	ENSMUSG00000066621.13	ENSMUST00000085701.7	5106	25	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCGTGACTGACAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	144160426	144131265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_144132836_144132949_144133070_144133169_144133277_144134709_144134803_144135372_144135509_144135946_144136128_144136547_144136605_144137632_144137713_144137829_144137927_144140225_144140329_144141442_144141571_144142982_144143141_144143234_144143385_144144211_144144368_144145412_144145559_144146677_144147184_144148222_144148369_144149390_144149493_144150873_144150975_144151062_144151238_144153070_144153197_144153720_144153844_144154043_144154227_144155331_144155567_144160312
ENSMUSG00000066629.3_0	chr12	+	383	1	FSM	ENSMUSG00000066629.3	ENSMUST00000085720.3	315	1	-35	-33	-35	33	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAAAAAAAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	12961987	12962370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_12962000_12962400
ENSMUSG00000066632.4_0	chr12	-	1739	1	FSM	ENSMUSG00000066632.4	ENSMUST00000085735.4	1255	1	-73	-411	-73	411	mono-exon	FALSE	NA	NA	NA	NA	NA	224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAAAATGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	10950313	10948574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_10948600_10950300
ENSMUSG00000066637.3_0	chr12	+	975	3	FSM	ENSMUSG00000066637.3	ENSMUST00000085741.2	1000	3	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAACCCAACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	9080010	9086383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9080197_9084921_9085089_9085761
ENSMUSG00000066637.3_2	chr12	+	760	4	FSM	ENSMUSG00000066637.3	ENSMUST00000219488.2	768	4	8	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGGCTGTGGAAGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	9080034	9091988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9080197_9084921_9085089_9088081_9088198_9091673
ENSMUSG00000066640.12_0	chr5	-	7821	5	FSM	ENSMUSG00000066640.12	ENSMUST00000110766.8	7857	5	23	13	23	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAGAAAGCCAGGCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	142881153	142852713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_142858276_142864412_142864632_142871293_142872838_142874423_142874631_142880864
ENSMUSG00000066643.13_0	chr12	+	4294	27	FSM	ENSMUSG00000066643.13	ENSMUST00000111113.3	4312	27	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAACTGATTTTGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	9024055	9078837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005
ENSMUSG00000066643.13_11	chr12	+	4070	29	FSM	ENSMUSG00000066643.13	ENST00000345530.8	4070	29	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTGAAGTTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	9024148	9078762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9045639_9045673_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005_9078317_9078405
ENSMUSG00000066643.13_23	chr12	+	4022	28	ISM	ENSMUSG00000066643.13	ENST00000345530.8	4070	29	801	1	801	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGAAGTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9024949	9078761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9045639_9045673_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005_9078317_9078405
ENSMUSG00000066643.13_24	chr12	+	3995	27	ISM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	796	0	796	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATTTGAAGTTTTAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	9024944	9078762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005_9078317_9078405
ENSMUSG00000066643.13_8	chr12	+	4036	28	FSM	ENSMUSG00000066643.13	ENST00000281405.9	4037	28	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATTTGAAGTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	9024148	9078761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_9024180_9024933_9025052_9027362_9027435_9028597_9028691_9031031_9031161_9032760_9032895_9035628_9035795_9035966_9036113_9037277_9037404_9039904_9040091_9046068_9046130_9053996_9054142_9055762_9055833_9056719_9056774_9058001_9058112_9058478_9058690_9062660_9062742_9065969_9066107_9066436_9066641_9068085_9068233_9069877_9070011_9071729_9071841_9072718_9072884_9074193_9074335_9074885_9075043_9077482_9077724_9078005_9078317_9078405
ENSMUSG00000066647.9_0	chr7	+	5099	3	FSM	ENSMUSG00000066647.9	ENSMUST00000209028.2	5117	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGATCCGGTTTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	29869310	29881742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29869640_29875275_29875372_29877068
ENSMUSG00000066720.8_0	chr17	-	1418	1	FSM	ENSMUSG00000066720.8	ENSMUST00000085989.8	1443	1	19	6	19	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGAGCCTCCTCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	23902981	23901563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23901600_23903000
ENSMUSG00000066721.4_1	chr7	-	1309	4	FSM	ENSMUSG00000066721.4	ENST00000458714.2	1325	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1932	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACCAGTCGGAGGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	24294792	24284954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24285564_24286078_24286315_24293865_24294073_24294535
ENSMUSG00000066724.4_0	chr7	-	625	1	FSM	ENSMUSG00000066724.4	ENSMUST00000086013.4	645	1	14	6	14	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	827	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAATAAGAAAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	23646701	23646076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_23646100_23646700
ENSMUSG00000066735.9_2	chr5	+	2207	5	FSM	ENSMUSG00000066735.9	ENST00000648179.1	2208	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3950	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGTGGAGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	129970907	130015554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_129971207_130007359_130007470_130010981_130012484_130014139_130014163_130015281
ENSMUSG00000066760.13_0	chr7	+	4406	6	FSM	ENSMUSG00000066760.13	ENSMUST00000071399.13	4421	6	4	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAAGAACCGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	16807968	16867364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16808226_16824299_16824648_16827475_16827836_16828934_16829295_16831942_16832159_16864499
ENSMUSG00000066798.4_0	chr2	-	4521	2	FSM	ENSMUSG00000066798.4	ENSMUST00000053098.6	4535	2	5	9	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGAGAACTTTGGGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	37320926	37315520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37319936_37320820
ENSMUSG00000066829.8_0	chr9	-	3237	8	FSM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGTGTAAATTAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22218934	22188044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUSG00000066829.8_1	chr9	-	3148	7	ISM	ENSMUSG00000066829.8	ENSMUST00000086278.7	3238	8	2035	1	2035	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAGTGTAAATTAAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	22216899	22188044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_22190577_22191748_22191856_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807
ENSMUSG00000066829.8_6	chr9	-	790	7	FSM	ENSMUSG00000066829.8	ENSMUST00000215202.2	822	7	23	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACCCCATGCGTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	22218921	22190371	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_22190577_22194463_22194557_22195312_22195440_22201834_22201939_22209712_22209806_22216807_22216899_22218844
ENSMUSG00000066838.8_0	chr7	-	2761	5	FSM	ENSMUSG00000066838.8	ENSMUST00000074455.9	2777	5	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAAAGTCTTCATGACT	NA	NA	NA	NA	NA	NA	NA	NA	7212989	7205123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_7207359_7208511_7208599_7209244_7209372_7210523_7210563_7212716
ENSMUSG00000066839.13_0	chr9	-	1574	8	ISM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	1220	19	1195	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAAAAATCAAAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	21995503	21983560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318
ENSMUSG00000066839.13_1	chr9	-	1658	9	FSM	ENSMUSG00000066839.13	ENSMUST00000098937.10	1673	9	7	8	7	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACCTCTTCCCTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	21996716	21983549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996644
ENSMUSG00000066839.13_12	chr9	-	1032	5	FSM	ENSMUSG00000066839.13	ENST00000592312.5	1042	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGGTCCACGGGGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	21987783	21983749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21983877_21984277_21984384_21984721_21985037_21985886_21986111_21987523
ENSMUSG00000066839.13_3	chr9	-	1651	9	FSM	ENSMUSG00000066839.13	ENSMUST00000180180.8	1676	9	8	17	-3	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATCAAAACCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	21996726	21983558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21983877_21984277_21984384_21984721_21984871_21984978_21985037_21985886_21986111_21987523_21987942_21989443_21989562_21995318_21995505_21996652
ENSMUSG00000066839.13_9	chr9	-	819	5	FSM	ENSMUSG00000066839.13	ENST00000252440.11	829	5	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGACAGTCCCCTCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	21987786	21983708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21983877_21984277_21984384_21984978_21985037_21985886_21986111_21987523
ENSMUSG00000066877.12_0	chr1	+	2742	5	FSM	ENSMUSG00000066877.12	ENSMUST00000086421.9	2772	5	19	11	19	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTATTATGACAAGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	43484929	43609664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_43485188_43548780_43548944_43572711_43572954_43593020_43593743_43608307
ENSMUSG00000066878.6_0	chr17	-	1963	1	FSM	ENSMUSG00000066878.6	ENSMUST00000086423.6	1988	1	11	14	11	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	8456	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90217866	90215903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_90215900_90217900
ENSMUSG00000066880.16_0	chr8	+	2903	4	FSM	ENSMUSG00000066880.16	ENSMUST00000119003.2	2920	4	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTAGTGTTCTATTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	72676712	72688473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_72676817_72682045_72682173_72682981_72683043_72685862
ENSMUSG00000066892.15_1	chr9	-	3748	4	FSM	ENSMUSG00000066892.15	ENSMUST00000148631.8	3756	4	5	3	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	20556038	20549084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20550495_20553319_20553393_20553499_20555595_20555868
ENSMUSG00000066892.15_3	chr9	-	2049	3	FSM	ENSMUSG00000066892.15	ENSMUST00000086458.10	2056	3	7	0	-5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGTTGCACTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	20556056	20549084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20550495_20553319_20553393_20555490
ENSMUSG00000066892.15_5	chr9	-	639	3	FSM	ENSMUSG00000066892.15	ENST00000592067.1	645	3	6	0	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCTCAGCTACCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	20553610	20550058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20550520_20553299_20553393_20553525
ENSMUSG00000066892.15_6	chr9	-	554	2	ISM	ENSMUSG00000066892.15	ENST00000592067.1	645	3	224	0	217	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGCTCAGCTACCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	20553392	20550058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20550520_20553299
ENSMUSG00000066894.15_0	chr5	+	4204	10	FSM	ENSMUSG00000066894.15	ENSMUST00000111967.8	4236	10	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACATACATTTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	117457171	117493062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117457569_117461564_117461646_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
ENSMUSG00000066894.15_1	chr5	+	2048	9	FSM	ENSMUSG00000066894.15	ENSMUST00000086464.8	2052	9	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGCACTTGGTACC	NA	NA	NA	NA	NA	NA	NA	NA	117457360	117491176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117457569_117462917_117463200_117472832_117473133_117476271_117476527_117481790_117482079_117486359_117486471_117487948_117487965_117489629_117489857_117490815
ENSMUSG00000066900.12_1	chr5	-	2408	12	FSM	ENSMUSG00000066900.12	ENSMUST00000086471.12	2425	12	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACTAAGTTGCCACGTG	NA	NA	NA	NA	NA	NA	NA	NA	117254055	117229753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_117231097_117232974_117233060_117236335_117236442_117237365_117237388_117237541_117237604_117238664_117238761_117243219_117243377_117244710_117244731_117246412_117246485_117247822_117247879_117250874_117250945_117253736
ENSMUSG00000066902.8_0	chr8	-	398	1	FSM	ENSMUSG00000066902.8	ENSMUST00000146939.2	432	1	24	10	24	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATCATAAAATTTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	3634206	3633808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_3633800_3634200
ENSMUSG00000066952.12_0	chr5	+	4617	31	FSM	ENSMUSG00000066952.12	ENSMUST00000202006.4	4631	31	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTCAGAGATTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	114453008	114502630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_114453128_114455643_114455760_114457732_114457932_114458707_114458789_114461326_114461507_114464894_114464994_114466754_114466869_114467237_114467310_114468193_114468314_114470749_114470818_114472146_114472253_114474291_114474373_114476222_114476315_114480168_114480264_114483951_114483999_114485457_114485539_114486420_114486527_114487580_114487699_114489697_114489812_114491886_114491964_114493252_114493322_114494989_114495075_114495979_114496140_114496951_114497036_114497571_114497666_114497804_114497861_114498545_114498682_114499103_114499175_114499287_114499386_114500169_114500270_114501051
ENSMUSG00000066952.12_6	chr5	+	3012	6	NNC	ENSMUSG00000066952.12	novel	4631	31	NA	NA	6713	10534	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGGAGAGAAGACAGGGT	NA	NA	NA	NA	NA	NA	NA	NA	114501636	114513171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_+_114503930_114505271_114505466_114506402_114506458_114507003_114507089_114508119_114508289_114512955
ENSMUSG00000066975.13_0	chr5	-	796	6	FSM	ENSMUSG00000066975.13	ENSMUST00000112385.8	808	6	0	12	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAGTATCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	112400384	112394370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112394685_112396040_112396184_112397034_112397177_112398884_112399004_112399612_112399664_112400357
ENSMUSG00000066975.13_1	chr5	-	769	5	FSM	ENSMUSG00000066975.13	ENSMUST00000086629.6	746	5	5	-28	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACTCAGTATCAACTG	NA	NA	NA	NA	NA	NA	NA	NA	112399663	112394370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112394685_112396040_112396184_112397034_112397177_112398884_112399004_112399612
ENSMUSG00000066975.13_2	chr5	-	712	4	FSM	ENSMUSG00000066975.13	ENSMUST00000112383.8	754	4	40	2	40	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCAACTGTGTCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112398988	112394361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_112394685_112396040_112396184_112397034_112397177_112398884
ENSMUSG00000066979.7_0	chr7	+	2204	8	FSM	ENSMUSG00000066979.7	ENSMUST00000084502.7	2218	8	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	3505	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTTCCAGGTGTGTTACC	NA	NA	NA	NA	NA	NA	NA	NA	131161963	131173620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_131162184_131162438_131162634_131163265_131163336_131165062_131165215_131167921_131168081_131169912_131170091_131170233_131170451_131172607
ENSMUSG00000067001.12_3	chr1	+	1266	6	FSM	ENSMUSG00000067001.12	ENST00000540675.5	1280	6	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCATTTACTTCCCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	107355989	107379923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_107356147_107363056_107363174_107373721_107373844_107375842_107375981_107377905_107378053_107379338
ENSMUSG00000067017.6_0	chr1	+	2843	1	NIC	ENSMUSG00000067017.6	novel	2858	2	NA	NA	8	-8	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	262	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATACTATCTATCCATG	NA	NA	NA	NA	NA	NA	NA	NA	105383703	105386546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_+_105383700_105386500
ENSMUSG00000067038.7_0	chr19	+	493	1	FSM	ENSMUSG00000067038.7	ENSMUST00000086764.7	396	1	-80	-17	-80	17	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAAGC	NA	NA	NA	NA	NA	NA	NA	NA	59310722	59311215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_59310700_59311200
ENSMUSG00000067071.9_0	chr1	-	1318	4	FSM	ENSMUSG00000067071.9	ENSMUST00000086851.2	1335	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTCATTGATGTGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	91340933	91339210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91340205_91340442_91340525_91340614_91340702_91340778
ENSMUSG00000067071.9_3	chr1	-	826	2	FSM	ENSMUSG00000067071.9	ENST00000409160.7	838	2	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACACTTACCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	91340696	91339780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91340525_91340614
ENSMUSG00000067071.9_6	chr1	-	746	1	NIC	ENSMUSG00000067071.9	novel	1335	4	NA	NA	177	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACACTTACCAGGGACC	NA	NA	NA	NA	NA	NA	NA	NA	91340526	91339780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_91339800_91340500
ENSMUSG00000067071.9_7	chr1	-	510	3	FSM	ENSMUSG00000067071.9	ENST00000409574.1	516	3	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCAGCTCGCCGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	91340699	91339821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_91340205_91340482_91340525_91340614
ENSMUSG00000067147.8_0	chrX	+	852	1	FSM	ENSMUSG00000067147.8	ENSMUST00000118791.2	801	1	-8	-43	-8	43	mono-exon	FALSE	NA	NA	NA	NA	NA	404	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAATTACATC	NA	NA	NA	NA	NA	NA	NA	NA	165637198	165638050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_165637200_165638000
ENSMUSG00000067148.16_0	chr17	-	1301	9	FSM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	11	2	11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTTTTTTTTTTTTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	46558969	46554847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46558820
ENSMUSG00000067148.16_2	chr17	-	1026	9	FSM	ENSMUSG00000067148.16	ENST00000646188.1	1032	9	0	6	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTACACACATACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	46561861	46555028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654_46558727_46561806
ENSMUSG00000067148.16_3	chr17	-	964	8	ISM	ENSMUSG00000067148.16	ENSMUST00000087026.13	1314	9	261	183	261	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTACACACATACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	46558719	46555028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_46555147_46555231_46555349_46555451_46555602_46555724_46555878_46555956_46556077_46556541_46556675_46557032_46557141_46558654
ENSMUSG00000067150.7_1	chr17	+	5070	32	NNC	ENSMUSG00000067150.7	novel	5081	32	NA	NA	8	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAGAAGGGCCCTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	46513715	46554519	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_+_46513952_46515580_46515703_46517412_46517486_46518704_46518843_46519000_46519184_46525115_46525143_46525502_46525689_46526657_46526735_46528507_46528608_46529470_46529555_46530316_46530443_46531686_46531778_46532278_46532408_46533586_46533718_46535941_46536098_46537338_46537381_46537844_46537935_46538655_46538856_46540237_46540338_46541124_46541307_46544643_46544745_46545378_46545476_46546790_46546927_46547835_46547937_46549298_46549346_46549815_46549914_46550439_46550503_46551083_46551167_46551740_46551849_46552342_46552481_46552651_46552817_46553059
ENSMUSG00000067194.7_0	chrX	+	5156	7	FSM	ENSMUSG00000067194.7	ENSMUST00000087143.7	5172	7	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGAACCTTAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	158155182	158172917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_158155412_158159376_158159461_158160454_158160559_158161534_158161586_158162725_158162808_158165683_158165776_158168403
ENSMUSG00000067199.5_0	chr19	+	2598	1	FSM	ENSMUSG00000067199.5	ENSMUST00000087155.5	2614	1	12	4	12	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCCCGGCTTTTATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	41818420	41821018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_41818400_41821000
ENSMUSG00000067203.9_0	chr17	-	960	5	ISM	ENSMUSG00000067203.9	ENSMUST00000174250.4	1052	6	289	6	289	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGAAGCCAGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34197475	34194055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34194083_34194453_34194588_34194714_34194990_34196744_34197021_34197227
ENSMUSG00000067203.9_1	chr17	-	1046	6	FSM	ENSMUSG00000067203.9	ENSMUST00000174250.4	1052	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGTGAAGCCAGCTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	34197764	34194055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34194083_34194453_34194588_34194714_34194990_34196744_34197021_34197227_34197498_34197700
ENSMUSG00000067206.4_0	chr5	-	958	4	FSM	ENSMUSG00000067206.4	ENST00000682860.1	970	4	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACCCACCCTCTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	73787352	73765073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_73765197_73768108_73768295_73772821_73772992_73786873
ENSMUSG00000067212.9_7	chr17	-	1436	7	FSM	ENSMUSG00000067212.9	ENSMUST00000102678.5	1472	7	11	25	11	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAATAAATAAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	36343736	36340892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36341124_36341262_36341293_36341469_36341587_36341713_36341990_36342529_36342806_36343044_36343315_36343500
ENSMUSG00000067219.10_0	chr5	+	4187	6	FSM	ENSMUSG00000067219.10	ENSMUST00000087212.8	4206	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAGAATTGTTTCTATTC	NA	NA	NA	NA	NA	NA	NA	NA	72805148	72828413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_72805277_72816024_72816292_72818098_72818156_72820876_72820968_72824118_72824280_72824930
ENSMUSG00000067220.13_0	chr5	-	2281	6	ISM	ENSMUSG00000067220.13	ENST00000420489.7	2345	7	804	2	804	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATCAAATGTACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	72775612	72761129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510
ENSMUSG00000067220.13_1	chr5	-	2383	7	FSM	ENSMUSG00000067220.13	ENST00000514170.7	2406	7	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATCAAATGTACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	72776456	72761129	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_72762873_72766797_72766905_72768151_72768260_72769503_72769615_72774017_72774128_72775510_72775613_72776354
ENSMUSG00000067242.12_0	chr19	+	1788	8	FSM	ENSMUSG00000067242.12	ENST00000637689.1	1794	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCACGTGTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38253149	38295201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38253181_38254022_38254095_38272417_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_2	chr19	+	634	2	FSM	ENSMUSG00000067242.12	ENST00000627699.1	654	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAACTTGGGGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	38253274	38254376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_38253555_38254022
ENSMUSG00000067242.12_3	chr19	+	1749	7	ISM	ENSMUSG00000067242.12	ENST00000637689.1	1794	8	881	6	769	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCACGTGTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38254030	38295201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_38254095_38272417_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608_38289774_38294067
ENSMUSG00000067242.12_4	chr19	+	1685	6	ISM	ENSMUSG00000067242.12	ENST00000637689.1	1794	8	19268	6	19156	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCACGTGTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	38272417	38295201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_38272490_38272589_38272662_38286376_38286449_38289155_38289326_38289608_38289774_38294067
ENSMUSG00000067274.11_0	chr5	+	1352	7	FSM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	3	3	3	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	48783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCCCAAGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	115697528	115701783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_115697599_115697845_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUSG00000067274.11_28	chr5	+	1281	6	ISM	ENSMUSG00000067274.11	ENSMUST00000086519.12	1358	7	321	3	321	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAGCCCCAAGCCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	115697846	115701783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_115697948_115698799_115699064_115699157_115699305_115699391_115699578_115700484_115700626_115701341
ENSMUSG00000067276.6_0	chrX	-	3539	13	FSM	ENSMUSG00000067276.6	ENSMUST00000087316.6	3561	13	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATTGACCAGTCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	142610399	142585237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_142586823_142587352_142587490_142587670_142587793_142588390_142588594_142588758_142588882_142590241_142590429_142590522_142590601_142590836_142591031_142591613_142591807_142592290_142592500_142593840_142593973_142603291_142603473_142610204
ENSMUSG00000067288.14_0	chr17	-	377	4	FSM	ENSMUSG00000067288.14	ENSMUST00000087342.13	392	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATTGGTTTTTCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	34043526	34042014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34042091_34042170_34042305_34043272_34043321_34043407
ENSMUSG00000067288.14_2	chr17	-	365	4	FSM	ENSMUSG00000067288.14	ENSMUST00000173844.8	382	4	10	7	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	10800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTAATTCTTGTCTAGAA	NA	NA	NA	NA	NA	NA	NA	NA	34043526	34042030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34042091_34042166_34042305_34043272_34043321_34043407
ENSMUSG00000067336.7_0	chr1	+	3417	12	FSM	ENSMUSG00000067336.7	ENST00000638587.1	3432	12	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1031	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAATGGTGTCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	59852755	59910025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59852922_59854399_59854571_59880589_59880701_59881901_59881994_59884636_59884868_59886216_59886332_59890336_59890498_59891452_59891601_59898331_59898469_59902939_59903113_59906494_59907775_59909393
ENSMUSG00000067344.8_2	chr6	+	369	1	FSM	ENSMUSG00000067344.8	ENSMUST00000119876.2	378	1	1	8	1	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATGAACAGGTTCAATC	NA	NA	NA	NA	NA	NA	NA	NA	145212126	145212495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145212100_145212500
ENSMUSG00000067365.12_0	chr5	+	1279	5	FSM	ENSMUSG00000067365.12	ENSMUST00000087511.10	1291	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGTTAATGCAAATTTG	NA	NA	NA	NA	NA	NA	NA	NA	38417539	38426977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38417837_38419340_38419483_38422155_38422315_38424522_38424629_38426402
ENSMUSG00000067367.10_0	chr5	+	1549	9	FSM	ENSMUSG00000067367.10	ENSMUST00000087514.9	1563	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCTATGATAACAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	38377824	38391647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38377980_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUSG00000067367.10_11	chr5	+	1489	9	FSM	ENSMUSG00000067367.10	ENSMUST00000114106.8	1504	9	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGTATCTATGATAA	NA	NA	NA	NA	NA	NA	NA	NA	38378036	38391640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_38378139_38381970_38382142_38383232_38383348_38385198_38385307_38385393_38385478_38387904_38388335_38388616_38388704_38390585_38390672_38391334
ENSMUSG00000067369.13_0	chrX	-	3102	13	FSM	ENSMUSG00000067369.13	ENSMUST00000087541.12	3119	13	10	7	10	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTATTCACTATCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	133177721	133123850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168311_133177594
ENSMUSG00000067369.13_19	chrX	-	1254	11	FSM	ENSMUSG00000067369.13	ENST00000245811.6	1276	11	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCCATGGTGAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	133168245	133138926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164590_133167005_133167065_133168079
ENSMUSG00000067369.13_26	chrX	-	815	4	FSM	ENSMUSG00000067369.13	ENSMUST00000087540.4	822	4	7	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGCTGCTGTCTCCGCATT	NA	NA	NA	NA	NA	NA	NA	NA	133177726	133163236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133163634_133167009_133167065_133168079_133168311_133177594
ENSMUSG00000067369.13_9	chrX	-	1700	13	FSM	ENSMUSG00000067369.13	ENST00000372935.5	1718	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTCCGAGACACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	133177693	133125298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_133125455_133138891_133138992_133139215_133139336_133140827_133140930_133141103_133141319_133141725_133141821_133143763_133143911_133162325_133162397_133163533_133163634_133164475_133164611_133167009_133167065_133168079_133168355_133177564
ENSMUSG00000067370.5_0	chr17	-	1561	1	FSM	ENSMUSG00000067370.5	ENSMUST00000087543.5	1580	1	14	5	14	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCAAGTGCAGCGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	34170448	34168887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34168900_34170400
ENSMUSG00000067377.13_0	chrX	-	1752	8	FSM	ENSMUSG00000067377.13	ENSMUST00000087557.12	1765	8	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATCGTTTTAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	132799169	132791820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_132792673_132793410_132793516_132795247_132795332_132795676_132795812_132796183_132796283_132797431_132797507_132797872_132798062_132798956
ENSMUSG00000067430.8_0	chr17	-	3383	4	FSM	ENSMUSG00000067430.8	ENSMUST00000087654.5	3407	4	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTACCACCTCTGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	33252361	33235845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33238944_33240431_33240484_33240679_33240807_33252255
ENSMUSG00000067455.6_0	chr13	+	759	1	FSM	ENSMUSG00000067455.6	ENSMUST00000087714.6	774	1	4	11	4	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAACTGCCAATATGGG	NA	NA	NA	NA	NA	NA	NA	NA	21919237	21919996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21919200_21920000
ENSMUSG00000067567.13_11	chrX	-	1743	12	FSM	ENSMUSG00000067567.13	ENST00000647886.1	1758	12	8	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTACCACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101548760	101328311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101328775_101329402_101329482_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_12	chrX	-	1693	11	FSM	ENSMUSG00000067567.13	ENST00000647594.1	1714	11	14	7	-7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTACCACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101548760	101328311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101328775_101351215_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472448_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_13	chrX	-	1642	11	FSM	ENSMUSG00000067567.13	ENST00000647980.1	1658	11	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGTCTACCACTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101548744	101328311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101472369_101472442_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_2	chrX	-	1657	10	FSM	ENSMUSG00000067567.13	ENST00000373583.6	1676	10	13	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATGTAGCTCGTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	101548773	101328253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101328775_101351244_101351351_101446190_101446286_101449142_101449316_101471720_101471830_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_57	chrX	-	1464	6	FSM	ENSMUSG00000067567.13	ENST00000648962.1	1484	6	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATTAGTACTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	101548686	101458301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101459200_101476090_101476204_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_61	chrX	-	770	5	FSM	ENSMUSG00000067567.13	ENST00000373560.7	779	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTCATTCACTTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	101548688	101458884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101459200_101541736_101541879_101543427_101543559_101548004_101548058_101548559
ENSMUSG00000067567.13_67	chrX	-	397	3	FSM	ENSMUSG00000067567.13	ENST00000373559.8	413	3	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCCCCTCCCTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	101476189	101459010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_101459200_101471720_101471830_101476090
ENSMUSG00000067575.6_0	chr17	-	414	1	FSM	ENSMUSG00000067575.6	ENSMUST00000147311.2	333	1	-46	-35	-46	35	mono-exon	FALSE	NA	NA	NA	NA	NA	150	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29356324	29355910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29355900_29356300
ENSMUSG00000067586.5_0	chr13	+	4444	2	FSM	ENSMUSG00000067586.5	ENSMUST00000087978.5	4463	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAACCAGAAGACTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	51562685	51576825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_51562982_51572677
ENSMUSG00000067629.14_1	chr17	+	5969	20	FSM	ENSMUSG00000067629.14	ENST00000629380.3	5978	20	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGGGCTGACTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	27160234	27191407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27160493_27163606_27163729_27165606_27165713_27171535_27171628_27172003_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409_27181473_27181887_27182062_27183800_27184013_27185856_27185948_27189472_27189649_27189681
ENSMUSG00000067629.14_17	chr17	+	3910	18	FSM	ENSMUSG00000067629.14	ENST00000449372.7	3919	18	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCACCCCCCCCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	27160420	27189549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27160493_27163606_27163729_27165606_27165713_27171535_27171628_27172003_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180409_27181473_27181887_27182062_27183806_27184013_27185856_27185948_27189472
ENSMUSG00000067629.14_36	chr17	+	5563	18	FSM	ENSMUSG00000067629.14	ENST00000682587.1	5568	18	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTGGGCTGACTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	27167919	27191407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27168000_27171535_27171628_27172003_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409_27181473_27181887_27182062_27183800_27184013_27185856_27185948_27189472_27189649_27189681
ENSMUSG00000067629.14_42	chr17	+	4016	18	FSM	ENSMUSG00000067629.14	ENST00000645250.1	4029	18	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCCCTCTTTCACCCCA	NA	NA	NA	NA	NA	NA	NA	NA	27171303	27189833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27171411_27171535_27171628_27172003_27172126_27173901_27174056_27174246_27174346_27175956_27176581_27176706_27176852_27177050_27177196_27178582_27178820_27178905_27179108_27179316_27179496_27180042_27180085_27180409_27181473_27181887_27182062_27183800_27184013_27185856_27185948_27189472_27189649_27189681
ENSMUSG00000067642.12_0	chr5	-	2514	7	ISM	ENSMUSG00000067642.12	ENST00000311519.5	2548	8	17280	3	2599	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGGTGGCAAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	30408121	30401238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_30402614_30403360_30403541_30404014_30404212_30404395_30404540_30405437_30405645_30407236_30407481_30407954
ENSMUSG00000067642.12_1	chr5	-	2545	8	FSM	ENSMUSG00000067642.12	ENST00000311519.5	2548	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAGGTGGCAAGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	30425401	30401238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_30402614_30403360_30403541_30404014_30404212_30404395_30404540_30405437_30405645_30407236_30407481_30407954_30408132_30425380
ENSMUSG00000067653.13_0	chr1	-	2271	9	FSM	ENSMUSG00000067653.13	ENSMUST00000193083.6	2277	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCCTGGTTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	36575602	36569274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371_36573519_36575577
ENSMUSG00000067653.13_1	chr1	-	2227	8	ISM	ENSMUSG00000067653.13	ENSMUST00000054665.10	1964	9	1321	-340	1321	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCAGCCTGGTTGCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	36573499	36569274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_36570723_36570803_36570903_36570989_36571089_36571192_36571292_36571382_36571482_36571661_36571788_36573067_36573197_36573371
ENSMUSG00000067713.8_0	chr15	-	1639	12	FSM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTACTGCAGTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	98729395	98710683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568_98723615_98729310
ENSMUSG00000067713.8_1	chr15	-	1555	11	ISM	ENSMUSG00000067713.8	ENSMUST00000168846.3	1652	12	5787	6	5787	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTACTGCAGTGTTTGAT	NA	NA	NA	NA	NA	NA	NA	NA	98723615	98710683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_98711362_98711477_98711625_98711886_98711925_98712068_98712235_98712389_98712517_98713063_98713119_98713194_98713241_98713377_98713437_98713539_98713622_98713756_98713867_98723568
ENSMUSG00000067719.6_0	chr5	-	454	1	FSM	ENSMUSG00000067719.6	ENSMUST00000088299.6	309	1	-43	-102	-43	102	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	24786903	24786449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24786400_24786900
ENSMUSG00000067722.5_0	chr17	+	3019	2	FSM	ENSMUSG00000067722.5	ENSMUST00000088307.5	3030	2	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACCGTGTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25403531	25406629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25403615_25403693
ENSMUSG00000067722.5_1	chr17	+	2937	1	NIC	ENSMUSG00000067722.5	novel	3030	2	NA	NA	165	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGACCGTGTATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	25403692	25406629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_25403700_25406600
ENSMUSG00000067780.4_0	chr1	+	1773	6	FSM	ENSMUSG00000067780.4	ENST00000649643.1	1785	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATTAGATATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	17672130	17695988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_17672267_17672769_17673109_17690006_17690126_17691624_17691758_17691870_17691987_17695058
ENSMUSG00000067787.11_0	chr2	-	2094	2	FSM	ENSMUSG00000067787.11	ENSMUST00000088494.3	2108	2	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTACTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	157408277	157398291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_157400248_157408139
ENSMUSG00000067787.11_1	chr2	-	2042	2	FSM	ENSMUSG00000067787.11	ENSMUST00000109528.9	2056	2	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTACTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	157408253	157398291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_157400248_157408167
ENSMUSG00000067787.11_2	chr2	-	1959	1	NIC	ENSMUSG00000067787.11	novel	2056	2	NA	NA	8007	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACTTTACTTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	157400250	157398291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_157398300_157400200
ENSMUSG00000067813.4_0	chr1	+	1452	4	FSM	ENSMUSG00000067813.4	ENST00000520030.5	1465	4	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTATGTGTTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	13742365	13771671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_13742509_13742591_13742989_13754279_13754499_13770978
ENSMUSG00000067818.7_0	chr2	+	1116	4	FSM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	5	7	5	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	5432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCATCTCTGGTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	156617344	156623571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156617427_156620438_156620649_156622401_156622564_156622909
ENSMUSG00000067818.7_10	chr2	+	368	2	FSM	ENSMUSG00000067818.7	ENST00000346786.2	384	2	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGACTAAGCTGTTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	156620445	156623074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156620649_156622909
ENSMUSG00000067818.7_9	chr2	+	1036	3	ISM	ENSMUSG00000067818.7	ENSMUST00000088552.7	1128	4	3097	7	0	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACCATCTCTGGTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	156620436	156623571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_156620649_156622401_156622564_156622909
ENSMUSG00000067847.14_0	chr2	+	556	3	FSM	ENSMUSG00000067847.14	ENSMUST00000088610.11	569	3	9	4	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	155985967	155987713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155986201_155986378_155986510_155987521
ENSMUSG00000067847.14_1	chr2	+	467	2	FSM	ENSMUSG00000067847.14	ENSMUST00000109597.10	550	2	82	1	75	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	155986234	155987713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155986510_155987521
ENSMUSG00000067847.14_2	chr2	+	378	3	FSM	ENSMUSG00000067847.14	ENSMUST00000119950.2	379	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCAGTCTATTTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	155986159	155987713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155986201_155986364_155986510_155987521
ENSMUSG00000067851.12_0	chr1	-	6956	38	FSM	ENSMUSG00000067851.12	ENSMUST00000088615.11	6978	38	15	7	15	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCCACAGCCCTGTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	10302880	10207802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_10209222_10210691_10210810_10211783_10211923_10212800_10212970_10214942_10215083_10217627_10217761_10222025_10222099_10223610_10223750_10223831_10223968_10224505_10224636_10227138_10227270_10228124_10228286_10229792_10229966_10230101_10230254_10230925_10231096_10231187_10231229_10233921_10234013_10243058_10243210_10243418_10243578_10244291_10244421_10250050_10250203_10251094_10251267_10253887_10253973_10254200_10254407_10254610_10254723_10258981_10259184_10259451_10259561_10259663_10259904_10264481_10264717_10269067_10269202_10269953_10270130_10275032_10275135_10279649_10279927_10283268_10283449_10284349_10284497_10286061_10286219_10286753_10286785_10302595
ENSMUSG00000067870.6_0	chr15	-	397	1	FSM	ENSMUSG00000067870.6	ENSMUST00000181935.2	378	1	5	-24	5	24	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAACTGCCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90648854	90648457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_90648500_90648900
ENSMUSG00000067873.12_0	chrX	+	1114	6	FSM	ENSMUSG00000067873.12	ENSMUST00000114751.9	1128	6	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAACCCCACTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	56098951	56102561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56102250
ENSMUSG00000067873.12_4	chrX	+	2786	10	FSM	ENSMUSG00000067873.12	ENSMUST00000088652.6	2810	10	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCTGAAATGTGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	56098987	56112532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_56099126_56099313_56099559_56100857_56101039_56101404_56101453_56101859_56102015_56104245_56104410_56105213_56105314_56109476_56109567_56110365_56110504_56111005
ENSMUSG00000067878.14_1	chrX	-	2876	16	FSM	ENSMUSG00000067878.14	ENSMUST00000114766.8	2891	16	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACATCTCTGTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	55867676	55843222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_55843463_55844649_55845030_55846362_55846553_55847120_55847203_55849725_55849831_55850759_55850905_55853203_55853331_55854977_55855151_55855397_55855526_55856222_55856912_55858674_55858768_55860884_55860994_55862635_55862800_55864035_55864114_55864203_55864297_55867596
ENSMUSG00000067882.15_0	chr17	-	607	5	FSM	ENSMUSG00000067882.15	ENST00000428155.1	616	5	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAGGACGAGCAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	23772535	23770053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23770156_23770980_23771085_23771535_23771605_23771964_23772082_23772320
ENSMUSG00000067889.8_0	chr19	+	7646	37	FSM	ENSMUSG00000067889.8	ENST00000309996.7	7669	37	11	12	1	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	1592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAGTAGTCGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	4761258	4801744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4761728_4768846_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ENSMUSG00000067889.8_12	chr19	+	8602	37	FSM	ENSMUSG00000067889.8	ENST00000533211.6	8618	37	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTTGTTAAATTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	4761267	4802650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4761728_4768787_4769026_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ENSMUSG00000067889.8_28	chr19	+	7436	36	FSM	ENSMUSG00000067889.8	ENST00000617502.5	7459	36	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	2860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAAGTAGTCGGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	4771122	4801744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4771561_4774107_4774260_4774657_4774832_4775928_4776021_4776167_4776249_4776609_4776726_4779089_4779203_4779329_4779518_4781301_4781420_4781953_4782113_4782415_4782719_4783681_4783836_4784066_4784938_4787369_4787508_4787838_4788596_4789134_4789338_4789618_4789710_4789880_4790028_4792360_4792625_4794075_4794301_4794493_4794584_4795136_4795398_4795485_4795617_4795807_4796013_4796593_4796969_4797739_4797985_4798086_4798226_4798621_4798707_4798965_4799163_4799429_4799573_4799661_4799738_4799810_4799862_4800048_4800270_4800508_4800683_4801176_4801220_4801528
ENSMUSG00000067916.10_0	chr4	+	2803	7	FSM	ENSMUSG00000067916.10	ENSMUST00000084149.10	2813	7	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATTCAAATGAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	147216503	147265035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_147216647_147219028_147219122_147224494_147224577_147249797_147249844_147260303_147260362_147261203_147261331_147262781
ENSMUSG00000067924.5_0	chrX	-	1201	1	FSM	ENSMUSG00000067924.5	ENSMUST00000088778.5	1232	1	23	8	23	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATGCTATTTAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	52672352	52671151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52671200_52672400
ENSMUSG00000067925.5_0	chrX	-	1161	1	FSM	ENSMUSG00000067925.5	ENSMUST00000088779.5	1195	1	21	13	21	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAGGAAATGGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	52645628	52644467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52644500_52645600
ENSMUSG00000067931.7_0	chr17	+	2640	6	FSM	ENSMUSG00000067931.7	ENSMUST00000088787.7	2652	6	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAACTGCATGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21787273	21808953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21787508_21789310_21789390_21794118_21794219_21803291_21803405_21805041_21805169_21806966
ENSMUSG00000067942.7_0	chr17	+	3789	5	FSM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGAATTTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21229204	21249114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21229249_21231937_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUSG00000067942.7_2	chr17	+	3735	4	ISM	ENSMUSG00000067942.7	ENSMUST00000088811.7	3800	5	2745	9	2642	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGAATTTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	21231947	21249114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_21232035_21240333_21240461_21240967_21241097_21245722
ENSMUSG00000067951.6_0	chr17	+	4383	3	FSM	ENSMUSG00000067951.6	ENSMUST00000233597.2	4406	3	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATACAGATAAGCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	20950118	20959403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_20950352_20953016_20953080_20955316
ENSMUSG00000067995.5_0	chr14	-	1459	8	FSM	ENSMUSG00000067995.5	ENSMUST00000088922.5	1467	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	648	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGATGGCAACTGTTATC	NA	NA	NA	NA	NA	NA	NA	NA	76248297	76134376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76135094_76144222_76144367_76155073_76155174_76186877_76186960_76232860_76233006_76234348_76234368_76245144_76245219_76248119
ENSMUSG00000068015.9_0	chr14	-	4675	20	FSM	ENSMUSG00000068015.9	ENSMUST00000088970.7	4694	20	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCACCTTTGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	75185293	74992120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032350_75032432_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ENSMUSG00000068015.9_8	chr14	-	3104	19	FSM	ENSMUSG00000068015.9	ENSMUST00000228252.2	3125	19	12	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGACTGAAATCAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	75185304	74993621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_74994584_75013020_75013099_75022930_75023069_75023720_75023831_75032736_75032810_75033477_75033532_75041660_75041698_75041800_75041891_75042908_75042993_75044913_75044982_75049039_75049156_75051045_75051152_75054508_75054573_75055931_75056060_75056933_75057071_75064037_75064144_75073088_75073216_75095416_75095562_75184823
ENSMUSG00000068036.17_0	chr17	+	7326	32	NIC	ENSMUSG00000068036.17	novel	7338	33	NA	NA	-1	-4	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTCCTTTGTCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	13980808	14126052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082036_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUSG00000068036.17_1	chr17	+	7717	33	FSM	ENSMUSG00000068036.17	ENSMUST00000139666.8	7732	33	15	0	15	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTACTGTGCTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	13980824	14126412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080239_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUSG00000068036.17_7	chr17	+	7712	33	NIC	ENSMUSG00000068036.17	novel	7732	33	NA	NA	24	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTACTGTGCTTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	13980833	14126412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_13981041_14024200_14024397_14027541_14027655_14029193_14029358_14030671_14030833_14038382_14038541_14042527_14042640_14043552_14043721_14046204_14046250_14049190_14049286_14050131_14050395_14052629_14052700_14055499_14055619_14066533_14066596_14066695_14066902_14069369_14069516_14069829_14069925_14071041_14071308_14072577_14072722_14075475_14075675_14080134_14080243_14082030_14082118_14101546_14101613_14102112_14102187_14102644_14102764_14104002_14104198_14104830_14104923_14105583_14105770_14108243_14109240_14116349_14116485_14119206_14119490_14122791_14122877_14124115
ENSMUSG00000068039.14_0	chr17	+	1888	11	FSM	ENSMUSG00000068039.14	ENSMUST00000089024.13	1902	11	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGACCACCTGGGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	13135223	13143437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13135517_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068039.14_4	chr17	+	2435	12	FSM	ENSMUSG00000068039.14	ENSMUST00000151287.8	2446	12	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCCAAGTGCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	13135279	13143954	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13135517_13136684_13136771_13136929_13137059_13138237_13138336_13138701_13138813_13139162_13139345_13139626_13139754_13140989_13141166_13141495_13141620_13142104_13142298_13142416_13142581_13143146
ENSMUSG00000068040.11_0	chr2	+	3879	18	FSM	ENSMUSG00000068040.11	ENSMUST00000089027.3	3896	18	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGAATGCAAGGGTGCG	NA	NA	NA	NA	NA	NA	NA	NA	153003231	153052378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_153003492_153020808_153020923_153024307_153024408_153029182_153029352_153029450_153029584_153030873_153030998_153032750_153032870_153032970_153033083_153033849_153033921_153036196_153036330_153037230_153037313_153037409_153037486_153040269_153040354_153042562_153042739_153044257_153044322_153045701_153045822_153046454_153046545_153050526
ENSMUSG00000068101.12_0	chr15	-	1181	6	FSM	ENSMUSG00000068101.12	ENSMUST00000089157.11	1202	6	12	9	-9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCACATTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	82128937	82117988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82118711_82123493_82123586_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUSG00000068101.12_7	chr15	-	771	5	FSM	ENSMUSG00000068101.12	ENSMUST00000089155.6	789	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGGAAGGAAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	82128921	82118290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82118711_82124079_82124160_82125527_82125621_82128333_82128414_82128823
ENSMUSG00000068105.12_0	chr15	-	1911	3	FSM	ENSMUSG00000068105.12	ENSMUST00000089161.10	1924	3	3	10	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACACTTACTCTGTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	82108551	82105953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_82107478_82107919_82108124_82108368
ENSMUSG00000068114.8_0	chr15	+	2028	7	FSM	ENSMUSG00000068114.8	ENSMUST00000089174.6	2046	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	364	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTAAACTATGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	82012130	82026394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_82012251_82014252_82014372_82015624_82015747_82015945_82016031_82018781_82018964_82019270_82019343_82025066
ENSMUSG00000068115.14_0	chr2	-	5065	24	FSM	ENSMUSG00000068115.14	ENSMUST00000109896.8	5093	24	19	9	19	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCATAAGTTTTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	150851299	150776447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150777360_150778866_150778981_150779473_150779642_150781772_150781887_150782591_150782751_150786500_150786571_150787003_150787109_150791258_150792300_150794404_150794713_150795225_150795333_150797491_150797625_150800475_150800557_150800670_150800782_150801687_150801863_150805274_150805416_150806053_150806191_150807997_150808163_150811899_150812053_150812943_150813135_150816023_150816091_150817709_150817883_150821352_150821450_150821917_150822112_150851150
ENSMUSG00000068120.5_1	chr17	-	638	1	FSM	ENSMUSG00000068120.5	ENSMUST00000181584.2	441	1	-57	-140	-57	140	mono-exon	FALSE	NA	NA	NA	NA	NA	1206	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATAAGATGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5866972	5866334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_5866300_5867000
ENSMUSG00000068134.14_0	chr2	-	4109	4	FSM	ENSMUSG00000068134.14	ENSMUST00000089207.13	4127	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATCTTTGCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	149978617	149956332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_149960121_149961484_149961549_149961744_149961872_149978487
ENSMUSG00000068134.14_1	chr2	-	4007	3	FSM	ENSMUSG00000068134.14	ENSMUST00000109931.8	4033	3	19	7	-17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCATCTTTGCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	149978579	149956332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_149960121_149961744_149961872_149978487
ENSMUSG00000068165.4_0	chr14	+	1099	1	FSM	ENSMUSG00000068165.4	ENSMUST00000089275.4	628	1	-105	-366	-105	366	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAGAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66282423	66283522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_66282400_66283500
ENSMUSG00000068184.8_0	chr13	-	661	4	FSM	ENSMUSG00000068184.8	ENSMUST00000163558.3	678	4	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCGATCCCTTCGTAT	NA	NA	NA	NA	NA	NA	NA	NA	108295149	108189131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_108189489_108217886_108217928_108228067_108228158_108294976
ENSMUSG00000068196.6_0	chr16	-	5091	4	FSM	ENSMUSG00000068196.6	ENSMUST00000089332.5	5108	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATATGTTTCCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	57575090	57444627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_57449181_57452673_57453005_57498699_57498819_57575002
ENSMUSG00000068196.6_1	chr16	-	5002	3	ISM	ENSMUSG00000068196.6	ENSMUST00000089332.5	5108	4	76280	10	-45816	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAAAATATGTTTCCTGC	NA	NA	NA	NA	NA	NA	NA	NA	57498820	57444630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_57449181_57452673_57453005_57498699
ENSMUSG00000068196.6_2	chr16	-	2663	2	FSM	ENSMUSG00000068196.6	ENST00000273342.8	2678	2	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGCAGGTGTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	57452993	57446834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_57449178_57452673
ENSMUSG00000068205.15_0	chr2	+	3548	4	FSM	ENSMUSG00000068205.15	ENSMUST00000043836.8	3552	4	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTTGTATTATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	140237357	140264873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_140237642_140242781_140242899_140260736_140260835_140261824
ENSMUSG00000068206.14_0	chr15	+	2039	13	FSM	ENSMUSG00000068206.14	ENSMUST00000163571.8	2054	13	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTCAGACCCTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79113385	79133682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79113621_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_1	chr15	+	1672	13	FSM	ENSMUSG00000068206.14	ENST00000404072.7	1694	13	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGTGAACCCAGGCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	79113456	79133339	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79113674_79113955_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068206.14_4	chr15	+	1963	13	FSM	ENSMUSG00000068206.14	ENSMUST00000018295.14	1977	13	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAATGCATGGGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	79113587	79133658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79113771_79113949_79114054_79114743_79114856_79123783_79123913_79125426_79125494_79127167_79127258_79129054_79129109_79129489_79129553_79130177_79130312_79130607_79130701_79131464_79131516_79132351_79132497_79132920
ENSMUSG00000068220.7_0	chr15	+	786	4	FSM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	81476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCACTGAGCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	78810928	78814655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78811005_78812169_78812250_78813832_78814005_78814197
ENSMUSG00000068220.7_11	chr15	+	710	3	ISM	ENSMUSG00000068220.7	ENSMUST00000089377.6	800	4	1245	10	1245	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAACCACTGAGCATGATG	NA	NA	NA	NA	NA	NA	NA	NA	78812169	78814655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_78812250_78813832_78814005_78814197
ENSMUSG00000068240.6_0	chr4	-	468	1	FSM	ENSMUSG00000068240.6	ENSMUST00000089430.6	504	1	10	26	10	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3973585	3973117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_3973100_3973600
ENSMUSG00000068245.15_0	chr14	-	2648	11	FSM	ENSMUSG00000068245.15	ENSMUST00000095157.11	2666	11	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTAATCCATGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	59602910	59584864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59586501_59586670_59586838_59588595_59588668_59590099_59590232_59590766_59590831_59591756_59591825_59592588_59592639_59593765_59593900_59596924_59597033_59599182_59599305_59602815
ENSMUSG00000068246.7_0	chr15	+	1515	3	FSM	ENSMUSG00000068246.7	ENSMUST00000230979.2	1529	3	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77613252	77620581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_77613349_77618664_77618791_77619288
ENSMUSG00000068246.7_2	chr15	+	1560	3	FSM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	12	1	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77613305	77620581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_77613447_77618664_77618791_77619288
ENSMUSG00000068246.7_4	chr15	+	1422	2	ISM	ENSMUSG00000068246.7	ENSMUST00000109775.4	1573	3	5368	1	5368	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTGTCTGACTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	77618661	77620581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_77618791_77619288
ENSMUSG00000068250.14_0	chr6	-	1447	7	FSM	ENSMUSG00000068250.14	ENSMUST00000111535.8	1457	7	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATAGTTCTTTTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	149090207	149058651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149090103
ENSMUSG00000068250.14_3	chr6	-	1347	7	FSM	ENSMUSG00000068250.14	ENSMUST00000095319.10	1369	7	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACTTCTATTGTCCCAT	NA	NA	NA	NA	NA	NA	NA	NA	149090169	149059083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149086489_149086623_149089733
ENSMUSG00000068250.14_5	chr6	-	625	6	FSM	ENSMUSG00000068250.14	ENST00000541931.5	631	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCGAGGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	149090123	149059256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891_149085037_149090103
ENSMUSG00000068250.14_6	chr6	-	587	5	ISM	ENSMUSG00000068250.14	ENST00000541931.5	631	6	5105	6	5105	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTACCGAGGCTGATCT	NA	NA	NA	NA	NA	NA	NA	NA	149085018	149059256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_149059330_149068303_149068416_149070945_149071003_149072330_149072549_149084891
ENSMUSG00000068262.5_0	chr6	-	1176	1	FSM	ENSMUSG00000068262.5	ENSMUST00000089501.5	1209	1	29	4	29	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGATTCCAGGACCACT	NA	NA	NA	NA	NA	NA	NA	NA	87743157	87741981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87742000_87743200
ENSMUSG00000068263.12_0	chr6	+	1486	7	FSM	ENSMUSG00000068263.12	ENST00000436022.2	1499	7	12	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCCTGGACCGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	87707883	87730758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727605_87727705_87728722_87728888_87730029_87730168_87730722
ENSMUSG00000068263.12_6	chr6	+	1488	7	FSM	ENSMUSG00000068263.12	ENST00000683648.1	1502	7	13	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCCCTGGACCGGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	87707884	87730758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87708523_87709655_87709919_87726113_87726260_87727602_87727705_87728722_87728888_87730029_87730168_87730722
ENSMUSG00000068264.12_0	chr2	+	1096	4	FSM	ENSMUSG00000068264.12	ENSMUST00000110210.8	1101	4	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATCTTGTCCTCTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	131052348	131055431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131052602_131053182_131053394_131054366_131054657_131055089
ENSMUSG00000068264.12_1	chr2	+	1416	4	FSM	ENSMUSG00000068264.12	ENSMUST00000089506.12	1432	4	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	131052374	131055433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131052602_131053182_131053394_131054366_131054657_131054745
ENSMUSG00000068264.12_2	chr2	+	1503	3	FSM	ENSMUSG00000068264.12	ENSMUST00000110208.8	1521	3	17	1	17	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTCCTCTTTTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	131052376	131055433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131052602_131053182_131053394_131054366
ENSMUSG00000068267.6_0	chr2	-	4870	1	FSM	ENSMUSG00000068267.6	ENSMUST00000089510.5	4886	1	7	9	7	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	468	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCACACAATCTCGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	131021980	131017110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131017100_131022000
ENSMUSG00000068270.16_0	chrX	+	8186	8	FSM	ENSMUSG00000068270.16	ENSMUST00000089520.3	8201	8	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACAAAAGGACTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	6489348	6549496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_6489651_6492882_6493018_6495245_6497710_6503009_6503072_6535713_6536491_6541154_6541336_6544276_6544547_6545501
ENSMUSG00000068284.15_0	chr16	+	2012	7	FSM	ENSMUSG00000068284.15	ENST00000491165.5	2027	7	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGAATTCTCTCTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	43993618	44047820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_43993874_44019266_44019385_44020976_44021042_44022100_44022130_44025360_44025444_44033002_44033100_44046455
ENSMUSG00000068290.12_0	chr2	-	1224	9	FSM	ENSMUSG00000068290.12	ENSMUST00000089559.11	1238	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGGTGCCAGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	130506571	130495885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130496243_130496581_130496631_130497105_130497163_130500219_130500259_130500508_130500632_130503656_130503759_130503996_130504110_130505267_130505475_130506394
ENSMUSG00000068303.7_0	chr6	+	2866	1	FSM	ENSMUSG00000068303.7	ENSMUST00000187705.2	2892	1	15	11	15	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGGAGTAGTCTTAGCT	NA	NA	NA	NA	NA	NA	NA	NA	85129617	85132483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85129600_85132500
ENSMUSG00000068323.13_0	chr6	+	3007	22	FSM	ENSMUSG00000068323.13	ENST00000377632.5	3019	22	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCTCCATCAGTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	83203192	83277486	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83203370_83217591_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83262804_83262919_83265271_83265434_83266128_83266308_83267755_83267829_83274200_83274357_83276407_83276493_83277452
ENSMUSG00000068323.13_7	chr6	+	2980	22	FSM	ENSMUSG00000068323.13	ENST00000358683.8	2995	22	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCGAAGGTAAAGGCTATCT	NA	NA	NA	NA	NA	NA	NA	NA	83217597	83277513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83217722_83237416_83237578_83238392_83238546_83239454_83239551_83240497_83240554_83241244_83241403_83242654_83242743_83244387_83244543_83245175_83245365_83247904_83248080_83249026_83249161_83250031_83250304_83254494_83254554_83256945_83257147_83265271_83265434_83266128_83266308_83267755_83267829_83272852_83272922_83273553_83273728_83274200_83274357_83276407_83276493_83277452
ENSMUSG00000068327.6_0	chr6	-	1506	2	FSM	ENSMUSG00000068327.6	ENSMUST00000174674.3	1514	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCAGTCTCCAGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	83047198	83045304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83046273_83046660
ENSMUSG00000068328.10_0	chr6	+	1743	12	FSM	ENSMUSG00000068328.10	ENSMUST00000092618.9	1769	12	11	15	11	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	3184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGAAGACAAAACAACT	NA	NA	NA	NA	NA	NA	NA	NA	83031512	83034774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83031814_83031891_83032030_83032109_83032261_83032486_83032672_83032878_83032952_83033047_83033122_83033348_83033416_83033522_83033626_83033739_83033860_83033958_83034075_83034256_83034376_83034478
ENSMUSG00000068329.13_0	chr6	-	1704	8	FSM	ENSMUSG00000068329.13	ENSMUST00000089645.13	1725	8	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCAAAAGTGGGGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	83031541	83028256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83028616_83028722_83028819_83029453_83029524_83029678_83029785_83030018_83030052_83030309_83030505_83030593_83030799_83030901
ENSMUSG00000068335.7_0	chr6	-	1796	5	FSM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCCTCTGCGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	83010445	83007918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747_83010048_83010351
ENSMUSG00000068335.7_1	chr6	-	1704	4	ISM	ENSMUSG00000068335.7	ENSMUST00000089651.6	1807	5	403	4	403	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGCCTCTGCGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	83010049	83007918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_83009042_83009211_83009397_83009515_83009610_83009747
ENSMUSG00000068391.9_0	chr15	+	857	3	FSM	ENSMUSG00000068391.9	ENSMUST00000089765.9	871	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAATATGCTTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	72962249	72965919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_72962433_72964681_72964809_72965372
ENSMUSG00000068394.5_0	chr2	-	5740	28	FSM	ENSMUSG00000068394.5	ENSMUST00000089776.3	5768	28	18	10	18	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCCGAAGATTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	125467015	125405017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_125406318_125408128_125408242_125408452_125408610_125410743_125410848_125411474_125411572_125413588_125413754_125418633_125418776_125421293_125421945_125423615_125423748_125425711_125425985_125428250_125428395_125429520_125429648_125429812_125429942_125431375_125431486_125432029_125432153_125436792_125436992_125443068_125443233_125444761_125444854_125447255_125447404_125452927_125453129_125454856_125454997_125456207_125456352_125460292_125460462_125461585_125461811_125461916_125461990_125462206_125462311_125463092_125463187_125466795
ENSMUSG00000068396.10_0	chr6	+	400	1	FSM	ENSMUSG00000068396.10	ENSMUST00000121998.2	354	1	-24	-22	-24	22	mono-exon	FALSE	NA	NA	NA	NA	NA	173	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCAAGACTTGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	71101569	71101969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_71101600_71102000
ENSMUSG00000068397.5_0	chr15	+	457	1	FSM	ENSMUSG00000068397.5	ENSMUST00000089785.5	483	1	17	9	17	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCCTAATGTACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	68181684	68182141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_68181700_68182100
ENSMUSG00000068479.6_0	chr2	-	4180	7	FSM	ENSMUSG00000068479.6	ENSMUST00000089926.6	4198	7	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGGATATGGTGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	121337136	121322399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_121325329_121325410_121325501_121327809_121327970_121329766_121329928_121330018_121330128_121332812_121333351_121336943
ENSMUSG00000068523.13_1	chr3	+	576	3	FSM	ENSMUSG00000068523.13	ENSMUST00000090031.12	593	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAAATATGCTGGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	146205570	146211319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_146205776_146209014_146209155_146211088
ENSMUSG00000068566.14_0	chr7	+	2795	3	FSM	ENSMUSG00000068566.14	ENSMUST00000096744.8	2813	3	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATAATGATAACAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	3339063	3347852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3339156_3341727_3341816_3345237
ENSMUSG00000068566.14_3	chr7	+	3997	3	FSM	ENSMUSG00000068566.14	ENSMUST00000203566.3	4027	3	10	20	10	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATTAAAAAAAAAAAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	3339109	3348938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3339318_3341727_3341816_3345237
ENSMUSG00000068566.14_5	chr7	+	2719	2	FSM	ENSMUSG00000068566.14	ENSMUST00000164553.8	2798	2	68	11	68	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAAACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	3341686	3347827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3341816_3345237
ENSMUSG00000068580.12_0	chr2	+	1992	11	FSM	ENSMUSG00000068580.12	ENSMUST00000090174.11	2008	11	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCCCCAGATGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119039125	119047525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119046912_119047023_119047109
ENSMUSG00000068580.12_8	chr2	+	1496	10	FSM	ENSMUSG00000068580.12	ENSMUST00000102519.5	1505	10	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCCCCAGATGTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	119039511	119047525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119039665_119040962_119041085_119041261_119041313_119041661_119041781_119041878_119042025_119042386_119042496_119045314_119045522_119045934_119046009_119046689_119046789_119047109
ENSMUSG00000068587.11_0	chr6	+	6463	48	NIC	ENSMUSG00000068587.11	novel	10851	93	NA	NA	16	-9	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAGACATTTTCAATGTT	NA	NA	NA	NA	NA	NA	NA	NA	40605780	40746048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_40605930_40619912_40620037_40621753_40621882_40629533_40629652_40631540_40631651_40632147_40632300_40633327_40633500_40634379_40634480_40635099_40635213_40635863_40635990_40638194_40638327_40638543_40638661_40639529_40639644_40640439_40640525_40641739_40641858_40643782_40643955_40645105_40645223_40646673_40646829_40648011_40648097_40648827_40648885_40649381_40649507_40652247_40652337_40653957_40654008_40654409_40654578_40657044_40657198_40657526_40657728_40659707_40659863_40660872_40661042_40661372_40661470_40662210_40662324_40663418_40663545_40664945_40665075_40665317_40665429_40665710_40665774_40666301_40666437_40666898_40666987_40668023_40668163_40668992_40669127_40669250_40669286_40669376_40669494_40669886_40670036_40670631_40670717_40737974_40738032_40740011_40740137_40741114_40741204_40742202_40742244_40742819_40742991_40745143
ENSMUSG00000068587.11_1	chr6	+	6467	48	NIC	ENSMUSG00000068587.11	novel	10851	93	NA	NA	8	-13	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAAAGACATTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	40605772	40746044	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_40605930_40619912_40620037_40621753_40621882_40629533_40629652_40631540_40631651_40632147_40632300_40633327_40633500_40634379_40634480_40635099_40635213_40635863_40635990_40638194_40638327_40638543_40638661_40639529_40639644_40640439_40640525_40641739_40641858_40643782_40643955_40645105_40645223_40646673_40646829_40648011_40648097_40648827_40648885_40649381_40649507_40652247_40652337_40653957_40654008_40680263_40680432_40683304_40683458_40683823_40684025_40685899_40686055_40687701_40687871_40688108_40688206_40724789_40724903_40725959_40726086_40727071_40727201_40727446_40727558_40727852_40727916_40731828_40731964_40732373_40732462_40733255_40733395_40734362_40734497_40734620_40734656_40734746_40734864_40735956_40736106_40736705_40736791_40737974_40738032_40740011_40740137_40741114_40741204_40742202_40742244_40742819_40742991_40745143
ENSMUSG00000068587.11_23	chr6	+	4811	41	FSM	ENSMUSG00000068587.11	ENST00000620571.1	4828	41	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGGAAAAGGATCAGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	40631545	40741188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40631651_40632147_40632300_40633327_40633500_40634379_40634480_40635099_40635213_40635863_40635990_40638194_40638327_40638543_40638661_40639529_40639644_40640439_40640525_40641739_40641858_40643782_40643955_40645105_40645223_40646673_40646829_40648011_40648101_40648827_40648885_40649381_40649507_40652247_40652337_40653957_40654008_40680263_40680432_40683304_40683458_40683823_40684025_40722110_40722266_40723251_40723421_40723987_40724085_40724789_40724903_40725959_40726086_40727071_40727201_40727446_40727558_40727852_40727916_40731828_40731964_40732373_40732462_40733255_40733395_40734362_40734497_40734620_40734656_40734746_40734864_40735956_40736106_40736705_40736791_40737974_40738032_40740011_40740137_40741114
ENSMUSG00000068587.11_33	chr6	+	3793	32	FSM	ENSMUSG00000068587.11	ENSMUST00000202779.3	3821	32	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTACCTATAGAATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	40705905	40745381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40706062_40706479_40706629_40707284_40707370_40708172_40708230_40712226_40712352_40713987_40714077_40716538_40716583_40716996_40717165_40721222_40721376_40721682_40721884_40722110_40722266_40723251_40723421_40723987_40724085_40724789_40724903_40725959_40726086_40727071_40727201_40727446_40727558_40727852_40727916_40731828_40731964_40732373_40732462_40733255_40733395_40734362_40734497_40734620_40734656_40734746_40734864_40735956_40736106_40736705_40736791_40737974_40738032_40740011_40740137_40741114_40741204_40742202_40742244_40742819_40742991_40745143
ENSMUSG00000068614.8_0	chr2	-	1454	7	FSM	ENSMUSG00000068614.8	ENSMUST00000090269.7	1473	7	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTACAAAAGCCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	113883360	113877773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113878091_113878603_113878786_113879649_113879842_113879995_113880158_113880769_113881095_113882383_113882542_113883242
ENSMUSG00000068617.6_0	chr16	+	580	5	FSM	ENSMUSG00000068617.6	ENST00000433756.1	659	5	79	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGTGAGTAAGTACAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14724530	14742018	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_14724677_14735506_14735612_14738158_14738311_14738644_14738750_14741946
ENSMUSG00000068617.6_5	chr16	+	450	4	ISM	ENSMUSG00000068617.6	ENST00000523092.5	521	5	10892	9	10892	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCCACATTAAGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	14735509	14742037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_14735612_14738158_14738311_14738644_14738750_14741946
ENSMUSG00000068663.15_0	chr16	+	6223	23	FSM	ENSMUSG00000068663.15	ENSMUST00000155633.8	6213	23	-23	13	2	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCAATGGCCCAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	10363204	10562729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413850_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ENSMUSG00000068663.15_1	chr16	+	2945	22	FSM	ENSMUSG00000068663.15	ENSMUST00000115827.8	2949	22	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCAAAGCCAGTCATCGAG	NA	NA	NA	NA	NA	NA	NA	NA	10363261	10539278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389464_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10539136
ENSMUSG00000068663.15_2	chr16	+	3392	23	FSM	ENSMUSG00000068663.15	ENST00000409790.6	3407	23	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTCTCCGTGGCCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	10363279	10559921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_10363507_10377884_10378014_10381000_10381135_10386245_10386395_10389357_10389468_10391163_10391288_10394365_10394541_10395751_10395806_10398792_10398907_10413665_10413898_10428866_10429000_10432363_10432465_10445242_10445366_10447908_10448019_10448620_10448666_10453109_10453161_10456650_10456780_10462624_10462746_10506343_10506496_10509249_10509455_10512483_10512655_10549524_10549684_10559477
ENSMUSG00000068697.8_0	chr14	-	1187	5	FSM	ENSMUSG00000068697.8	ENST00000359322.5	1192	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTGTGAAGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	20705424	20699161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20699678_20700556_20700723_20701090_20701336_20703691_20703871_20705343
ENSMUSG00000068697.8_1	chr14	-	1108	4	ISM	ENSMUSG00000068697.8	ENST00000359322.5	1192	5	1557	0	1557	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGTGTGAAGGCAGGCA	NA	NA	NA	NA	NA	NA	NA	NA	20703872	20699161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_20699678_20700556_20700723_20701090_20701336_20703691
ENSMUSG00000068699.13_0	chr6	+	8931	47	FSM	ENSMUSG00000068699.13	ENSMUST00000101617.9	8939	47	6	2	6	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTAGCTCTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29433280	29461880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29433813_29438462_29438712_29440170_29440269_29440395_29440547_29440636_29440756_29440875_29440954_29441097_29441261_29441432_29441634_29442880_29443019_29443372_29443500_29443658_29443796_29444003_29444198_29444295_29444410_29445006_29445151_29445374_29445499_29445639_29445801_29446049_29446141_29446228_29446399_29446605_29446724_29446806_29447070_29447393_29447992_29448556_29448731_29448832_29448996_29449234_29449396_29450564_29450733_29450812_29450937_29451370_29451528_29451602_29451793_29451995_29452020_29452131_29452380_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ENSMUSG00000068699.13_4	chr6	+	9027	48	FSM	ENSMUSG00000068699.13	ENSMUST00000065090.8	9038	48	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCTTAGCTCTTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	29433283	29461880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_29433813_29438462_29438712_29440170_29440269_29440395_29440547_29440636_29440756_29440875_29440954_29441097_29441261_29441432_29441634_29442880_29443019_29443372_29443500_29443658_29443796_29444003_29444198_29444295_29444410_29445006_29445151_29445374_29445499_29445639_29445801_29446049_29446141_29446228_29446399_29446605_29446724_29446806_29447070_29447393_29447992_29448556_29448731_29448832_29448996_29449234_29449396_29450564_29450733_29450812_29450937_29451370_29451528_29451602_29451793_29451995_29452020_29452131_29452380_29452797_29452897_29453197_29453298_29453618_29453760_29454041_29454171_29454260_29454435_29455118_29455281_29455359_29455564_29455782_29455936_29456023_29456147_29456290_29456534_29456735_29457006_29457099_29457238_29457441_29457558_29458775_29458909_29459007_29459185_29459366_29459586_29460693_29460904_29461020
ENSMUSG00000068732.6_0	chr3	-	2750	3	FSM	ENSMUSG00000068732.6	ENSMUST00000106622.3	2752	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108469484	108463740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108466277_108467502_108467635_108469402
ENSMUSG00000068732.6_1	chr3	-	2856	3	FSM	ENSMUSG00000068732.6	ENSMUST00000090546.6	2864	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCTGCTTTGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	108469774	108463740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108466277_108467502_108467635_108469586
ENSMUSG00000068735.15_0	chr2	+	1117	6	FSM	ENSMUSG00000068735.15	ENST00000308212.9	1123	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGAGGTTGTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	93017816	93030584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_93018042_93027959_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068735.15_16	chr2	+	877	5	FSM	ENSMUSG00000068735.15	ENST00000533940.5	887	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGAGGTTGTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	93027974	93030584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068735.15_4	chr2	+	1045	6	FSM	ENSMUSG00000068735.15	ENST00000616990.4	1054	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGGAGGTTGTGTCGGCC	NA	NA	NA	NA	NA	NA	NA	NA	93017819	93030584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_93017967_93027953_93028094_93028607_93028683_93029209_93029337_93029701_93029804_93030130
ENSMUSG00000068739.14_0	chr3	-	3553	11	FSM	ENSMUSG00000068739.14	ENSMUST00000090553.12	3570	11	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGCTGGGAAGGTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	108352503	108332186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108334298_108334575_108334706_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068739.14_6	chr3	-	1856	12	FSM	ENSMUSG00000068739.14	ENSMUST00000102625.11	1866	12	35	-25	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCAGACTTGAACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	108352450	108333902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108334298_108334575_108334706_108335176_108335249_108335489_108335648_108335921_108336052_108336556_108336779_108338780_108338937_108340333_108340478_108341364_108341524_108343201_108343283_108344824_108344896_108352312
ENSMUSG00000068742.12_0	chr2	-	3956	12	FSM	ENSMUSG00000068742.12	ENSMUST00000090559.12	3976	12	13	7	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAACTGTGTTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	92264375	92233997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068742.12_1	chr2	-	3821	13	FSM	ENSMUSG00000068742.12	ENST00000443527.6	3835	13	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAAACTGTGTTGTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	92264310	92233997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92234910_92234979_92236166_92241970_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068742.12_12	chr2	-	2149	11	FSM	ENSMUSG00000068742.12	ENSMUST00000111278.2	2160	11	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92264376	92241610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_92242113_92242958_92243052_92243293_92243497_92243611_92243764_92243980_92244293_92246498_92246640_92252506_92252596_92253222_92253408_92254889_92255033_92257246_92257356_92264156
ENSMUSG00000068744.13_0	chr3	+	1679	8	FSM	ENSMUSG00000068744.13	ENSMUST00000090561.10	1686	8	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTGAAAGTAGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	108291161	108295495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108291243_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068744.13_3	chr3	+	1681	8	FSM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGTGAGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108291174	108295541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108291212_108291551_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068744.13_5	chr3	+	1640	7	ISM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	381	6	381	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGTGAGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108291555	108295541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_108291602_108291689_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068744.13_6	chr3	+	1595	6	ISM	ENSMUSG00000068744.13	ENSMUST00000102629.8	1687	8	514	6	514	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTAGTGAGCTCTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	108291688	108295541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_108291748_108292285_108292725_108293608_108293724_108293815_108294053_108294593_108294712_108294914
ENSMUSG00000068748.8_0	chr6	+	4416	28	FSM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAACTCATTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	22925830	23052216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_22925895_22959628_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_1	chr6	+	7632	28	FSM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCAAAAATAAATATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	22925830	23052885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_22925895_22959628_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_35	chr6	+	4352	27	ISM	ENSMUSG00000068748.8	ENST00000449182.1	4425	28	33798	9	33798	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTAACTCATTCTGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	22959628	23052216	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23000199_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_38	chr6	+	7571	27	ISM	ENSMUSG00000068748.8	ENST00000652298.1	7642	28	33798	7	33798	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAATATAAATATTG	NA	NA	NA	NA	NA	NA	NA	NA	22959628	23052888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024943_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_40	chr6	+	7616	27	ISM	ENSMUSG00000068748.8	ENST00000393386.7	7686	28	33799	5	33799	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTTGTGTTCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22959629	23052910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024919_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068748.8_6	chr6	+	7681	28	FSM	ENSMUSG00000068748.8	ENST00000393386.7	7686	28	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAACTTGTGTTCACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22925830	23052910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_22925895_22959628_22959809_22961594_22961747_22965160_22965257_22965725_22965793_22972710_22972869_22973010_22973162_22986129_22986315_22987329_22987457_22994516_22994564_22999198_23002746_23007272_23007418_23016137_23016230_23022197_23022284_23024919_23025041_23027831_23027915_23029218_23029354_23030588_23030724_23033341_23033506_23035043_23035180_23036883_23037031_23042322_23042417_23042746_23042821_23044245_23044375_23045603_23045751_23049529_23049673_23050395_23050532_23051970
ENSMUSG00000068749.10_0	chr3	+	1207	9	FSM	ENSMUSG00000068749.10	ENSMUST00000090569.10	1239	9	11	21	11	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	4121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAATTTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	108164252	108187269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108164622_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ENSMUSG00000068749.10_16	chr3	+	716	9	FSM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTAAGAAGGAGCCGT	NA	NA	NA	NA	NA	NA	NA	NA	108165345	108187119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_108165374_108169001_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ENSMUSG00000068749.10_20	chr3	+	679	8	ISM	ENSMUSG00000068749.10	ENST00000538610.5	725	9	3666	8	3666	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAAGAAGGAGCCGTC	NA	NA	NA	NA	NA	NA	NA	NA	108169011	108187120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_108169069_108172381_108172509_108173748_108173817_108175108_108175217_108175348_108175408_108176143_108176247_108179606_108179694_108187050
ENSMUSG00000068758.9_0	chr14	-	2268	11	FSM	ENSMUSG00000068758.9	ENSMUST00000224163.2	2315	11	47	0	47	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGAGCTACATAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	8123124	8113751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574
ENSMUSG00000068758.9_1	chr14	-	1605	12	FSM	ENSMUSG00000068758.9	ENSMUST00000090591.4	1614	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACTTCCTGTGCTGCTATC	NA	NA	NA	NA	NA	NA	NA	NA	8123479	8114272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8114394_8114689_8114757_8117743_8117847_8118598_8118714_8118795_8118826_8118956_8119076_8119495_8119729_8120390_8120521_8120818_8120943_8121694_8121850_8122574_8122754_8123250
ENSMUSG00000068762.12_0	chr3	-	1139	8	FSM	ENSMUSG00000068762.12	ENSMUST00000106685.9	1153	8	8	6	-7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTAGCTCTGTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	107851057	107846168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107849448_107849550_107849648_107849731_107850017_107850083_107850560_107850637_107850913
ENSMUSG00000068762.12_1	chr3	-	725	5	FSM	ENSMUSG00000068762.12	ENSMUST00000106683.8	745	5	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATCTTTCACTGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	107850667	107846286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107846633_107848308_107848420_107848504_107848601_107850017_107850083_107850560
ENSMUSG00000068798.11_0	chr3	-	2398	8	FSM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACATTTCCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105708647	105634586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560_105657645_105708554
ENSMUSG00000068798.11_1	chr3	-	2306	7	ISM	ENSMUSG00000068798.11	ENSMUST00000090678.11	2407	8	51007	4	50956	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTAACATTTCCCTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105657645	105634586	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_105636281_105639271_105639388_105645070_105645215_105646829_105646971_105648661_105648719_105653219_105653289_105657560
ENSMUSG00000068823.11_0	chr3	+	4300	20	FSM	ENSMUSG00000068823.11	ENSMUST00000029446.13	4318	20	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	102927751	102965494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102947756_102947850_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_22	chr3	+	3848	19	FSM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102927923	102965307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102927986_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_45	chr3	+	4177	20	FSM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	102927928	102965494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102927986_102936104_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_76	chr3	+	3813	19	FSM	ENSMUSG00000068823.11	ENSMUST00000197488.5	3827	19	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCCTGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102927993	102965120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102928208_102936104_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_85	chr3	+	3782	18	ISM	ENSMUSG00000068823.11	ENSMUST00000198180.5	3849	19	8186	0	8129	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAACAATGACAAGGGTCAG	NA	NA	NA	NA	NA	NA	NA	NA	102936108	102965307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_102936529_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068823.11_95	chr3	+	4115	19	ISM	ENSMUSG00000068823.11	ENSMUST00000199420.5	4185	20	8181	8	8130	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACTAGCACCTAGCGCT	NA	NA	NA	NA	NA	NA	NA	NA	102936109	102965494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_102936529_102943890_102944038_102946007_102946207_102947248_102947359_102948460_102948559_102950472_102950555_102950872_102951002_102951121_102951248_102951944_102952158_102954100_102954242_102954329_102954495_102956936_102957045_102957613_102957790_102958355_102958469_102960127_102960248_102961970_102962150_102962664_102962829_102963660_102963794_102964201
ENSMUSG00000068855.4_0	chr3	-	510	1	FSM	ENSMUSG00000068855.4	ENSMUST00000090782.4	520	1	9	1	9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACACTTTGGTGGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96128187	96127677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96127700_96128200
ENSMUSG00000068856.4_0	chr3	+	1899	6	FSM	ENSMUSG00000068856.4	ENSMUST00000076372.5	1915	6	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAGAGTGATGGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	96079660	96084877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96079924_96080286_96080416_96080856_96081400_96081638_96081846_96083950_96084125_96084294
ENSMUSG00000068874.14_0	chr3	+	1704	12	FSM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTCTCAGATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	94840367	94852062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94840474_94844007_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
ENSMUSG00000068874.14_4	chr3	+	1599	11	ISM	ENSMUSG00000068874.14	ENSMUST00000090839.12	1712	12	3640	7	3640	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTCTCTCAGATCACTC	NA	NA	NA	NA	NA	NA	NA	NA	94844006	94852062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_94844065_94844205_94844319_94844518_94844705_94845265_94845387_94846956_94847140_94847358_94847538_94849774_94849854_94849935_94850058_94851149_94851243_94851385_94851505_94851716
ENSMUSG00000068876.17_0	chr3	-	5006	21	FSM	ENSMUSG00000068876.17	ENSMUST00000107273.9	5016	21	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAAATTCTTGTCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	94693801	94667383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_94668809_94669080_94669245_94669865_94669975_94670288_94670408_94670494_94670579_94671768_94671859_94672805_94672968_94674426_94674598_94676469_94676728_94677271_94677479_94677802_94678013_94680437_94680571_94680806_94680956_94681512_94681726_94682209_94682343_94683418_94683547_94685303_94685400_94685510_94685581_94685688_94685790_94686460_94687330_94693686
ENSMUSG00000068882.14_0	chr2	+	1992	12	FSM	ENSMUSG00000068882.14	ENSMUST00000090852.11	2001	12	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGCCAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	69691914	69702130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69692057_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000068882.14_14	chr2	+	969	8	FSM	ENSMUSG00000068882.14	ENST00000414531.2	980	8	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAAAGGAGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	69693617	69700905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699199_69700178_69700365_69700728
ENSMUSG00000068882.14_22	chr2	+	920	7	ISM	ENSMUSG00000068882.14	ENST00000414531.2	980	8	2923	11	2923	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAAAGGAGGGCATGG	NA	NA	NA	NA	NA	NA	NA	NA	69696540	69700905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699199_69700178_69700365_69700728
ENSMUSG00000068882.14_5	chr2	+	2070	12	FSM	ENSMUSG00000068882.14	ENSMUST00000166411.8	2088	12	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTGATATTTCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	69691914	69702181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69692084_69693567_69693660_69696533_69696638_69696831_69697007_69697615_69697724_69697795_69697897_69699122_69699195_69699485_69699526_69700223_69700365_69700728_69700925_69701021_69701178_69701465
ENSMUSG00000068917.13_0	chr3	+	2116	13	FSM	ENSMUSG00000068917.13	ENSMUST00000090927.12	2128	13	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCCCCCCCAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89072130	89084222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89072414_89074341_89074512_89076004_89076231_89076924_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUSG00000068917.13_1	chr3	+	2082	13	FSM	ENSMUSG00000068917.13	ENSMUST00000121931.8	2112	13	24	6	24	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGACCCCCCCCAATCCC	NA	NA	NA	NA	NA	NA	NA	NA	89072170	89084222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89072414_89074341_89074512_89076001_89076231_89076921_89077010_89077355_89077423_89077599_89077717_89080683_89080851_89081503_89081599_89082251_89082382_89082464_89082548_89082698_89082779_89082951_89083043_89083700
ENSMUSG00000068921.15_0	chr3	-	4753	13	FSM	ENSMUSG00000068921.15	ENSMUST00000090938.11	4760	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTGTGTGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	88857714	88828109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88831221_88832600_88832719_88833578_88833669_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068921.15_16	chr3	-	1367	12	FSM	ENSMUSG00000068921.15	ENSMUST00000107491.11	1375	12	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTATTGGATTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	88857251	88830942	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88831221_88832600_88832719_88834317_88834378_88835515_88835675_88835753_88835835_88836702_88836834_88837782_88837876_88838218_88838328_88840871_88840974_88843455_88843561_88850081_88850136_88857174
ENSMUSG00000068922.15_3	chr3	-	1857	14	FSM	ENSMUSG00000068922.15	ENSMUST00000126245.2	1875	14	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGACATACGCATTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	88821294	88816927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88817218_88817436_88817547_88817620_88817726_88817932_88818118_88818189_88818322_88818593_88818747_88818843_88818979_88819070_88819189_88819332_88819421_88819543_88819608_88820009_88820086_88820164_88820235_88820873_88821010_88821099
ENSMUSG00000068923.15_0	chr3	-	5008	5	FSM	ENSMUSG00000068923.15	ENSMUST00000107505.8	5020	5	6	6	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGCACAGTGCTACAGCC	NA	NA	NA	NA	NA	NA	NA	NA	88682465	88652012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597_88680298_88682410
ENSMUSG00000068923.15_1	chr3	-	4550	4	FSM	ENSMUSG00000068923.15	ENSMUST00000090945.5	4567	4	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATAGGCACAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	88679899	88652017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88655318_88656085_88656210_88669032_88669857_88679597
ENSMUSG00000068923.15_2	chr3	-	5006	5	NNC	ENSMUSG00000068923.15	novel	5020	5	NA	NA	0	-10	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATAGGCACAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	88682471	88652017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_-_88655318_88656088_88656210_88669032_88669857_88679597_88680298_88682410
ENSMUSG00000068966.11_0	chr2	-	6486	2	FSM	ENSMUSG00000068966.11	ENSMUST00000091037.3	6510	2	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCAACCTTGCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	33318218	33296127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_33302508_33318112
ENSMUSG00000069008.4_0	chr3	-	1716	1	FSM	ENSMUSG00000069008.4	ENSMUST00000091117.4	1252	1	-49	-415	-49	415	mono-exon	FALSE	NA	NA	NA	NA	NA	202	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTAAAATGGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58011717	58010001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_58010000_58011700
ENSMUSG00000069014.5_0	chr3	+	1485	1	FSM	ENSMUSG00000069014.5	ENSMUST00000091130.5	1488	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	54388859	54390344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_54388900_54390300
ENSMUSG00000069020.10_0	chr2	+	2186	5	FSM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATTTTTGTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	29717358	29735009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_29717448_29722703_29722775_29731413_29731496_29732732_29732782_29733114
ENSMUSG00000069020.10_4	chr2	+	2098	4	ISM	ENSMUSG00000069020.10	ENSMUST00000091142.4	2196	5	5349	5	5349	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCATTTTTGTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	29722702	29735009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_29722775_29731413_29731496_29732732_29732782_29733114
ENSMUSG00000069045.12_0	chrY	-	2218	15	FSM	ENSMUSG00000069045.12	ENST00000360160.8	2218	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTTAATTGAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	1282948	1262944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_-_1263368_1263569_1263701_1263791_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309_1280440_1282900
ENSMUSG00000069045.12_1	chrY	-	2160	14	ISM	ENSMUSG00000069045.12	ENST00000360160.8	2218	15	2519	0	2513	0	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTTAATTGAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	1280429	1262944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrY_-_1263368_1263569_1263701_1263791_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309
ENSMUSG00000069045.12_17	chrY	-	1702	14	FSM	ENSMUSG00000069045.12	ENST00000418231.2	1702	14	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1282942	1263649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_-_1263698_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309_1280440_1282900
ENSMUSG00000069045.12_18	chrY	-	1653	13	ISM	ENSMUSG00000069045.12	ENST00000418231.2	1702	14	2510	0	2510	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAATGCTGGATTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	1280432	1263649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrY_-_1263698_1263795_1263950_1264840_1264959_1265027_1265210_1265574_1265720_1265828_1265974_1266358_1266520_1266594_1266694_1267102_1267189_1269704_1269841_1278896_1278997_1279422_1279579_1280309
ENSMUSG00000069083.5_0	chr3	-	1892	1	FSM	ENSMUSG00000069083.5	ENSMUST00000091289.5	1590	1	-51	-251	-51	251	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	25266820	25264928	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_25264900_25266800
ENSMUSG00000069089.9_0	chr13	-	1974	12	FSM	ENSMUSG00000069089.9	ENSMUST00000091299.8	1988	12	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCTTTGTTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	100867438	100839143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100854079_100854191_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069089.9_5	chr13	-	1139	11	FSM	ENSMUSG00000069089.9	ENSMUST00000225990.2	1159	11	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAATATTTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	100867398	100839827	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100840015_100840898_100841047_100842874_100843025_100846581_100846669_100848004_100848105_100853008_100853128_100855809_100855879_100857093_100857162_100859187_100859222_100866965_100867026_100867281
ENSMUSG00000069094.13_0	chr3	-	6278	13	FSM	ENSMUSG00000069094.13	ENSMUST00000099195.10	6298	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAAATATCAAAGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	19365473	19277278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19365027
ENSMUSG00000069094.13_4	chr3	-	4422	13	FSM	ENSMUSG00000069094.13	ENSMUST00000091314.11	4454	13	18	14	18	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCAAATTCATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	19319154	19278859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_19282006_19283851_19283933_19284419_19284517_19285120_19285266_19287263_19287356_19287839_19287972_19290076_19290178_19290607_19290704_19295309_19295374_19297213_19297366_19310941_19311026_19314395_19314457_19318983
ENSMUSG00000069114.9_0	chr3	+	2727	6	FSM	ENSMUSG00000069114.9	ENST00000610895.2	2746	6	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGCATGCTTATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	9316666	9346710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_9317141_9329594_9330481_9343313_9343417_9345018_9345193_9345350_9345524_9345793
ENSMUSG00000069114.9_3	chr3	+	2734	6	FSM	ENSMUSG00000069114.9	ENSMUST00000155203.2	7414	6	997	3683	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGGCATGCTTATAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	9316658	9346710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_9317141_9329594_9330481_9343313_9343413_9345015_9345193_9345350_9345524_9345793
ENSMUSG00000069117.5_0	chr13	-	529	1	FSM	ENSMUSG00000069117.5	ENSMUST00000074072.5	561	1	14	18	14	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	450	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATGGAAAAAAAAAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	97897126	97896597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_97896600_97897100
ENSMUSG00000069135.12_0	chr17	+	3501	13	FSM	ENSMUSG00000069135.12	ENSMUST00000097419.10	3505	13	3	1	3	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTAGGTTTATCCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	8384335	8415635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8394350_8394411_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUSG00000069135.12_3	chr17	+	3052	12	FSM	ENSMUSG00000069135.12	ENSMUST00000024636.15	3077	12	19	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTCCATTTTACAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	8384390	8415301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8391759_8391841_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413352
ENSMUSG00000069135.12_6	chr17	+	2654	11	FSM	ENSMUSG00000069135.12	ENST00000622353.4	2672	11	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTACATGCAGGTATTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	8384389	8415121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8384531_8384755_8384810_8387866_8387922_8388359_8388449_8388837_8388976_8401059_8401287_8403232_8403346_8405344_8405414_8410229_8410270_8411016_8411114_8413490
ENSMUSG00000069136.5_0	chr2	-	393	1	NIC	ENSMUSG00000069136.5	novel	408	3	NA	NA	21	-2	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGTCTACGCTGTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	22785727	22785334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_22785300_22785700
ENSMUSG00000069171.15_0	chr13	-	1341	3	FSM	ENSMUSG00000069171.15	ENSMUST00000091458.13	3207	3	1332	534	148	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGGAAAGGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	78346544	78337625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_78338133_78343280_78343809_78346238
ENSMUSG00000069171.15_1	chr13	-	1415	4	FSM	ENSMUSG00000069171.15	ENST00000615873.1	1428	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTGGAAAGGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78346686	78337627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_78338133_78343280_78343809_78346238_78346543_78346608
ENSMUSG00000069206.15_0	chr13	-	3229	4	FSM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGGTGTCTGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67599734	67588551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67591454_67596939_67597036_67597468_67597596_67599630
ENSMUSG00000069206.15_1	chr13	-	3127	3	ISM	ENSMUSG00000069206.15	ENSMUST00000075255.6	3238	4	2146	0	2105	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGGTGTCTGCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	67597597	67588551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67591454_67596939_67597036_67597468
ENSMUSG00000069208.10_0	chr13	-	1396	4	FSM	ENSMUSG00000069208.10	ENSMUST00000202645.4	1406	4	4	6	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCGCCTTGGTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	74642085	74628178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74641968
ENSMUSG00000069208.10_1	chr13	-	1535	5	FSM	ENSMUSG00000069208.10	ENSMUST00000221173.2	1549	5	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTCGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74642103	74628181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74629270_74630657_74630719_74630935_74631063_74632017_74632142_74641968
ENSMUSG00000069223.11_0	chr13	-	548	3	FSM	ENSMUSG00000069223.11	ENSMUST00000152292.2	557	3	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTCAGAGAAACGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55932315	55923765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_55924124_55931694_55931807_55932237
ENSMUSG00000069237.9_0	chr13	+	3635	5	FSM	ENSMUSG00000069237.9	ENSMUST00000099547.4	3664	5	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACGTCAATGTCAACAG	NA	NA	NA	NA	NA	NA	NA	NA	46823017	46831523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_46823732_46824684_46824806_46827021_46827146_46827728_46827869_46828987
ENSMUSG00000069255.14_0	chr13	+	1141	8	FSM	ENSMUSG00000069255.14	ENSMUST00000091672.13	1161	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACATCATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	30843993	30895206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659_30892733_30894688
ENSMUSG00000069255.14_1	chr13	+	3007	7	FSM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCTGACATCATGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	30844083	30895206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_30844130_30852787_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ENSMUSG00000069255.14_2	chr13	+	2961	6	ISM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	8700	12	8700	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGCCTGACATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	30852783	30895202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_30852822_30856375_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ENSMUSG00000069255.14_3	chr13	+	2930	5	ISM	ENSMUSG00000069255.14	ENSMUST00000095914.7	3015	7	12296	1	12296	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCATGTGCAGTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	30856379	30895213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_30856459_30880218_30880269_30889608_30889684_30891912_30892085_30892659
ENSMUSG00000069268.5_0	chr13	-	440	1	FSM	ENSMUSG00000069268.5	ENSMUST00000105106.2	461	1	21	0	21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACACCGAATACTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23758349	23757909	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23757900_23758300
ENSMUSG00000069270.7_0	chr13	-	2478	1	FSM	ENSMUSG00000069270.7	ENSMUST00000171127.4	2482	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	23867931	23865453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23865500_23867900
ENSMUSG00000069272.7_0	chr13	-	681	1	FSM	ENSMUSG00000069272.7	ENSMUST00000102969.6	704	1	17	6	17	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCATAAGATTGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	23755377	23754696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23754700_23755400
ENSMUSG00000069294.3_0	chr13	+	5311	3	FSM	ENSMUSG00000069294.3	ENSMUST00000226225.2	5326	3	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTAAAACCAGTCAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	22508762	22517025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22508922_22510395_22510564_22512041
ENSMUSG00000069300.4_0	chr13	+	451	1	FSM	ENSMUSG00000069300.4	ENSMUST00000110452.2	463	1	2	10	2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGAGCTGCTGCATGTC	NA	NA	NA	NA	NA	NA	NA	NA	22227385	22227836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22227400_22227800
ENSMUSG00000069301.6_0	chr13	-	445	1	FSM	ENSMUSG00000069301.6	ENSMUST00000091741.6	485	1	31	9	31	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGGGCTTAGCACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	22227083	22226638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_22226600_22227100
ENSMUSG00000069302.6_0	chr13	-	315	1	FSM	ENSMUSG00000069302.6	ENSMUST00000091742.6	405	1	82	8	82	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGAAGCAGGTTTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	22219656	22219341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_22219300_22219700
ENSMUSG00000069303.8_0	chr13	+	1256	2	FSM	ENSMUSG00000069303.8	ENSMUST00000180288.2	1256	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCACTTTTGACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	22017912	22020835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_22018318_22019984
ENSMUSG00000069307.8_0	chr13	-	1235	2	FSM	ENSMUSG00000069307.8	ENSMUST00000091749.4	1254	2	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCCACTTTTGACACAGT	NA	NA	NA	NA	NA	NA	NA	NA	21994348	21991446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21992298_21993964
ENSMUSG00000069308.8_0	chr13	+	465	1	FSM	ENSMUSG00000069308.8	ENSMUST00000102982.2	469	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATTCTACCTTACTCG	NA	NA	NA	NA	NA	NA	NA	NA	21971678	21972143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21971700_21972100
ENSMUSG00000069309.3_0	chr13	-	351	1	FSM	ENSMUSG00000069309.3	ENSMUST00000091751.3	393	1	30	12	30	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGGAAAATAAGACAATTG	NA	NA	NA	NA	NA	NA	NA	NA	21971358	21971007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_21971000_21971400
ENSMUSG00000069310.5_0	chr13	-	612	1	FSM	ENSMUSG00000069310.5	ENSMUST00000091752.5	630	1	16	2	16	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAAAGCTAGTAGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	23929569	23928957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23929000_23929600
ENSMUSG00000069372.4_0	chr18	+	777	3	FSM	ENSMUSG00000069372.4	ENST00000379445.7	790	3	11	2	-4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1030	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGGGACACAGTAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	57601583	57610425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_57601909_57605656_57605769_57610085
ENSMUSG00000069456.5_14	chr10	+	863	4	Fusion	ENSMUSG00000069456.5_ENSMUSG00000099009.2	novel	2766	4	NA	NA	46	-2256	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTCTACTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127595850	127649452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr10_+_127596120_127646922_127647182_127648654_127648819_127649281
ENSMUSG00000069456.5_31	chr10	+	873	5	Fusion	ENSMUSG00000069456.5_ENSMUSG00000099009.2	novel	3207	4	NA	NA	35	-2256	multi-exon	TRUE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTCTACTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127595839	127649452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr10_+_127596044_127637304_127637380_127646922_127647182_127648654_127648819_127649281
ENSMUSG00000069456.5_44	chr10	+	817	4	FSM	ENSMUSG00000069456.5	ENSMUST00000071646.2	3207	4	134	2256	134	-2256	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCCTTCTCTACTGGACT	NA	NA	NA	NA	NA	NA	NA	NA	127637156	127649452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127637380_127646922_127647182_127648654_127648819_127649281
ENSMUSG00000069495.13_0	chr2	+	4686	14	FSM	ENSMUSG00000069495.13	ENSMUST00000092123.11	4697	14	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGATATATGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	49341508	49441960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_49341971_49378700_49378861_49403226_49403373_49412482_49412690_49418859_49419009_49420022_49420156_49422055_49422248_49425266_49425357_49426587_49426737_49426836_49427181_49435720_49435858_49437457_49437618_49438442_49438777_49439937
ENSMUSG00000069516.9_0	chr10	-	1280	4	FSM	ENSMUSG00000069516.9	ENSMUST00000092163.9	1316	4	28	8	28	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCACAGGTTGTCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	117118198	117113243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_117114093_117114547_117114627_117116545_117116711_117118011
ENSMUSG00000069520.7_0	chr10	-	3060	6	FSM	ENSMUSG00000069520.7	ENSMUST00000217887.2	3084	6	19	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGACTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115198133	115176651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713
ENSMUSG00000069520.7_1	chr10	-	2939	7	FSM	ENSMUSG00000069520.7	ENSMUST00000219890.2	2949	7	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGACTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115198124	115176651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115197864
ENSMUSG00000069520.7_2	chr10	-	2993	7	FSM	ENSMUSG00000069520.7	ENSMUST00000092170.7	3012	7	14	5	-6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGACTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115198158	115176651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197865_115197956
ENSMUSG00000069520.7_3	chr10	-	2773	7	FSM	ENSMUSG00000069520.7	ENSMUST00000217884.2	2799	7	21	5	21	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAGACTTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	115198385	115176651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115178575_115179602_115179813_115182936_115183192_115183550_115183689_115195558_115195673_115197713_115197753_115198291
ENSMUSG00000069539.12_0	chr10	-	4805	18	FSM	ENSMUSG00000069539.12	ENSMUST00000174252.8	4817	18	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAAGAACATTTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	89522145	89474592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89476979_89477852_89477973_89481323_89481420_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ENSMUSG00000069539.12_6	chr10	-	3535	18	FSM	ENSMUSG00000069539.12	ENSMUST00000092227.12	3566	18	26	5	26	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGTATGCTTAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	89522104	89475818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89476979_89477852_89477973_89481323_89481417_89481538_89481606_89482620_89482722_89485826_89485946_89486689_89486823_89488804_89488919_89489965_89490089_89492569_89492747_89493671_89493798_89495100_89495218_89495996_89496219_89498177_89498328_89502578_89502724_89505506_89505665_89514139_89514345_89521899
ENSMUSG00000069565.13_1	chr10	+	2076	12	FSM	ENSMUSG00000069565.13	ENST00000336761.10	2092	12	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAACCTGAGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80100895	80124235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123295
ENSMUSG00000069565.13_6	chr10	+	1984	12	FSM	ENSMUSG00000069565.13	ENSMUST00000092305.6	1994	12	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAACCTGAGTGCTGTC	NA	NA	NA	NA	NA	NA	NA	NA	80100910	80124235	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80101013_80109840_80109882_80110281_80110449_80110637_80110704_80113405_80113517_80114066_80114116_80116762_80116846_80118857_80119012_80120063_80120094_80120242_80120384_80121083_80121261_80123372
ENSMUSG00000069601.15_0	chr10	+	5582	43	FSM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAGAAACTCACCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69644250	69859684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_69644348_69644702_69644802_69645000_69645100_69651524_69651624_69658037_69658224_69660147_69660247_69685935_69686035_69703214_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838062_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ENSMUSG00000069601.15_4	chr10	+	5561	42	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	6	8207	6	21	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAAGTACACTTACGTCA	NA	NA	NA	NA	NA	NA	NA	NA	69644249	69851484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_69644348_69644702_69644802_69645000_69645100_69651524_69651624_69658037_69658224_69660147_69660247_69685935_69686035_69703214_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838062_69838340_69838432_69840439_69840822_69851397
ENSMUSG00000069601.15_64	chr10	+	5488	42	ISM	ENSMUSG00000069601.15	ENST00000503366.5	5596	43	456	7	456	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAGAAACTCACCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	69644699	69859684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_69644802_69645000_69645100_69651524_69651624_69658037_69658224_69660147_69660247_69685935_69686035_69703214_69703314_69706831_69707030_69710619_69710719_69713659_69713759_69715722_69715822_69718190_69718389_69720576_69720676_69720968_69721068_69728151_69728350_69729274_69729374_69733870_69733970_69734057_69734157_69734823_69734920_69740027_69740101_69740277_69740341_69756267_69756322_69763524_69763649_69768223_69768327_69786781_69786889_69791755_69791981_69794747_69794903_69809551_69809764_69811877_69812086_69813542_69813640_69814300_69814530_69815147_69815274_69816101_69816225_69817945_69818028_69830201_69830277_69833924_69834057_69835184_69835329_69837752_69838062_69838340_69838432_69840439_69840822_69851397_69851484_69859661
ENSMUSG00000069622.6_0	chr10	+	1128	1	FSM	ENSMUSG00000069622.6	ENSMUST00000092511.6	630	1	-132	-366	-132	366	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	59231444	59232572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59231400_59232600
ENSMUSG00000069631.15_0	chr11	-	2080	11	FSM	ENSMUSG00000069631.15	ENST00000638708.1	2097	11	10	7	-4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCACCAGTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	106084402	106054148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077926_106078007_106084291
ENSMUSG00000069631.15_16	chr11	-	1873	11	FSM	ENSMUSG00000069631.15	ENST00000640086.1	1878	11	4	1	-2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGTATTAGTTTCATTG	NA	NA	NA	NA	NA	NA	NA	NA	106084364	106054202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106055256_106055300_106055636_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106077950_106078007_106084291
ENSMUSG00000069631.15_30	chr11	-	1764	11	FSM	ENSMUSG00000069631.15	ENST00000640679.1	1767	11	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTCCTTAAGTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	106084348	106054212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069631.15_31	chr11	-	1702	10	ISM	ENSMUSG00000069631.15	ENST00000640679.1	1767	11	6348	2	7	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGTCCTTAAGTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	106078001	106054212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_106055018_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926
ENSMUSG00000069631.15_48	chr11	-	1530	12	FSM	ENSMUSG00000069631.15	ENST00000638276.1	1536	12	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTTAGAAGGAAGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	106084348	106054611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106055256_106055300_106055636_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069631.15_6	chr11	-	2076	12	FSM	ENSMUSG00000069631.15	ENST00000638702.1	2089	12	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATGTTGGGAATGGCA	NA	NA	NA	NA	NA	NA	NA	NA	106084377	106054161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106055256_106055300_106055545_106055788_106058637_106058743_106059134_106059307_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077950_106078007_106084291
ENSMUSG00000069631.15_77	chr11	-	863	9	FSM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCCTCCAGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106077978	106054856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055018_106058637_106058743_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387_106075446_106077926
ENSMUSG00000069631.15_78	chr11	-	805	8	ISM	ENSMUSG00000069631.15	ENST00000640397.1	864	9	2539	1	2539	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGTCCTCCAGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106075439	106054856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_106055018_106058637_106058743_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106071780_106071810_106075387
ENSMUSG00000069631.15_85	chr11	-	1063	9	FSM	ENSMUSG00000069631.15	ENST00000579340.5	1078	9	9	6	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGGAGCCTAGGGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	106084376	106055510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106055788_106058637_106058743_106061779_106061904_106061981_106062091_106064078_106064201_106064504_106064608_106075387_106075446_106077926_106078007_106084291
ENSMUSG00000069633.13_0	chr8	-	2831	5	FSM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	20	19	-15	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGTAAATAACTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3517660	3507123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782_3515972_3517571
ENSMUSG00000069633.13_1	chr8	-	2743	4	ISM	ENSMUSG00000069633.13	ENSMUST00000004686.13	2870	5	1708	19	1673	-16	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGTAAATAACTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3515972	3507123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_3509435_3510271_3510335_3513921_3514101_3515782
ENSMUSG00000069662.6_0	chr10	-	4033	2	FSM	ENSMUSG00000069662.6	ENSMUST00000092584.6	4048	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTGAGAATCGTGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	37014906	37009375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_37012932_37014429
ENSMUSG00000069678.11_0	chr6	+	899	9	FSM	ENSMUSG00000069678.11	ENSMUST00000165164.9	918	9	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83055337	83057828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83055460_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUSG00000069678.11_1	chr6	+	845	9	FSM	ENSMUSG00000069678.11	ENSMUST00000177177.8	854	9	2	7	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83055612	83057828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83055681_83055875_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUSG00000069678.11_4	chr6	+	777	8	ISM	ENSMUSG00000069678.11	ENSMUST00000177177.8	854	9	265	7	204	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCACTTTTCATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	83055875	83057828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_83055982_83056096_83056250_83056414_83056487_83056620_83056727_83056902_83056937_83057034_83057122_83057530_83057612_83057690
ENSMUSG00000069682.7_0	chr10	-	627	1	FSM	ENSMUSG00000069682.7	ENSMUST00000092620.6	635	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	2338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCAGTGGAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	29575376	29574749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29574700_29575400
ENSMUSG00000069727.6_0	chr7	-	3135	4	FSM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	1	12	1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACGGAAGAACCTGGCGT	NA	NA	NA	NA	NA	NA	NA	NA	42342141	42309540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_42312421_42314181_42314243_42314441_42314569_42342074
ENSMUSG00000069727.6_1	chr7	-	3058	3	ISM	ENSMUSG00000069727.6	ENSMUST00000107992.2	3148	4	27591	5	27591	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAACCTGGCGTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	42314551	42309533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_42312421_42314181_42314243_42314441
ENSMUSG00000069729.15_2	chr17	+	5503	15	FSM	ENSMUSG00000069729.15	ENST00000635849.1	5520	15	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAAACATACCCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	5293107	5394178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5293347_5314306_5314397_5341230_5341559_5356023_5356170_5362109_5362220_5364148_5364308_5368915_5369126_5371547_5371753_5377550_5377690_5377923_5378097_5382761_5382913_5385238_5385336_5386799_5387584_5389490_5389622_5391637
ENSMUSG00000069743.6_0	chr17	-	3680	5	FSM	ENSMUSG00000069743.6	ENSMUST00000084141.6	3686	5	6	0	6	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTCGAACTTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22064734	22035865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059604_22059696_22064624
ENSMUSG00000069743.6_1	chr17	-	2717	5	FSM	ENSMUSG00000069743.6	ENSMUST00000232918.2	2735	5	2	16	2	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGCAAGAAAAAAAAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	22064751	22036864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22039170_22040050_22040178_22042824_22042873_22059585_22059696_22064624
ENSMUSG00000069744.8_0	chr11	+	760	6	FSM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594230	97604326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97594317_97594613_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069744.8_4	chr11	+	675	5	ISM	ENSMUSG00000069744.8	ENSMUST00000103147.5	766	6	388	0	388	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGCCTGCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	97594612	97604326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_97594799_97597623_97597732_97601927_97602106_97603262_97603358_97604218
ENSMUSG00000069755.6_0	chr12	-	1990	4	FSM	ENSMUSG00000085642.9	ENSMUST00000140360.8	2004	4	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCAGTTTCATTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	20971249	20925640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_20927097_20964759_20964843_20965748_20965793_20970842
ENSMUSG00000069755.6_2	chr12	-	2475	2	FSM	ENSMUSG00000069755.6	ENSMUST00000079237.7	2488	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTCAACACAACTCACAC	NA	NA	NA	NA	NA	NA	NA	NA	20952652	20948579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_20950936_20952533
ENSMUSG00000069769.14_0	chr11	-	6415	14	FSM	ENSMUSG00000069769.14	ENST00000674964.1	6434	14	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACTTGTTTAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	88609098	88230213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88235429_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
ENSMUSG00000069769.14_1	chr11	-	6416	14	FSM	ENSMUSG00000069769.14	ENSMUST00000107909.8	6436	14	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGACTTGTTTAGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	88609041	88230213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88235487_88237878_88237952_88239609_88239765_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88608854
ENSMUSG00000069769.14_11	chr11	-	1705	14	FSM	ENSMUSG00000069769.14	ENST00000416426.6	1719	14	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGACTCTATTTTGTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	88609778	88234904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88235487_88237878_88237952_88239609_88239819_88257610_88257674_88276870_88276946_88285390_88285506_88304733_88304817_88370831_88370881_88480880_88480974_88603263_88603306_88607335_88607421_88608115_88608198_88608530_88608572_88609665
ENSMUSG00000069769.14_16	chr11	-	325	4	FSM	ENSMUSG00000069769.14	ENST00000674898.1	334	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGTAGAAAAATAAATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	88304815	88272417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_88272471_88276870_88276946_88285390_88285506_88304733
ENSMUSG00000069793.13_1	chr11	-	2613	4	FSM	ENSMUSG00000069793.13	ENST00000526861.5	2629	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAATGAAACATCTGTA	NA	NA	NA	NA	NA	NA	NA	NA	82879085	82872073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82872813_82872979_82873704_82875382_82875512_82878064
ENSMUSG00000069796.4_0	chr11	+	2207	3	FSM	ENSMUSG00000069796.4	ENSMUST00000125600.2	2220	3	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGACTGAGACCCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	82524189	82527133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_82524312_82524401_82524528_82525174
ENSMUSG00000069808.14_0	chr11	+	2118	5	FSM	ENSMUSG00000069808.14	ENSMUST00000094014.10	2130	5	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTATGTGCCCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	76092852	76100242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_76093082_76093377_76093462_76096079_76096282_76097953_76098050_76098735
ENSMUSG00000069833.14_0	chr19	+	18079	5	FSM	ENSMUSG00000069833.14	ENSMUST00000092956.4	18100	5	13	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCTGATGTATCGTGCTC	NA	NA	NA	NA	NA	NA	NA	NA	8966660	8996552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_8979062
ENSMUSG00000069833.14_5	chr19	+	818	6	FSM	ENSMUSG00000069833.14	ENSMUST00000092955.11	830	6	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTTCTTTGAGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8966665	9054073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8966794_8977025_8977137_8977463_8977621_8978039_8978228_9014522_9014623_9053939
ENSMUSG00000069835.11_0	chr11	+	945	6	FSM	ENSMUSG00000069835.11	ENSMUST00000108656.9	968	6	17	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGATGCTGCAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	69512866	69514690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
ENSMUSG00000069835.11_1	chr11	+	798	7	FSM	ENSMUSG00000069835.11	ENSMUST00000092969.2	800	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGCAGCCATTTTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	69512879	69514696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69512942_69513081_69513159_69513318_69513371_69513532_69513617_69513685_69513788_69513937_69513979_69514316
ENSMUSG00000069844.13_0	chr11	+	2395	6	FSM	ENSMUSG00000069844.13	ENSMUST00000092996.5	2412	6	16	1	16	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACATGAAGCCTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	66943511	66956397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66943743_66944600_66944692_66946556_66946755_66947340_66947434_66949152_66949269_66954731
ENSMUSG00000069844.13_3	chr11	+	616	5	FSM	ENSMUSG00000069844.13	ENST00000551045.1	631	5	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATGAAGAAGAGGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	66944598	66954847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66944692_66946556_66946755_66947344_66947434_66949152_66949273_66954731
ENSMUSG00000069844.13_9	chr11	+	502	4	FSM	ENSMUSG00000069844.13	ENST00000577427.1	516	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTATATACTGTAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	66946568	66954931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_66946662_66947340_66947434_66949152_66949269_66954731
ENSMUSG00000069855.10_0	chr11	-	2348	17	FSM	ENSMUSG00000069855.10	ENSMUST00000093029.9	2377	17	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCTAAAATGTGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	61233664	61192463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_61193266_61193526_61193582_61194746_61194842_61198357_61198491_61199691_61199762_61200786_61200863_61201560_61201670_61203615_61203684_61204469_61204584_61216622_61216721_61219353_61219452_61220586_61220632_61227041_61227085_61227640_61227790_61228842_61228912_61233264_61233367_61233442
ENSMUSG00000069892.10_0	chr11	-	5960	4	FSM	ENSMUSG00000069892.10	ENSMUST00000101295.9	5985	4	7	18	7	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACCTAATAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	48942045	48906718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48911220_48929410_48930646_48941709_48941859_48941970
ENSMUSG00000069892.10_1	chr11	-	5888	3	ISM	ENSMUSG00000069892.10	ENSMUST00000101295.9	5985	4	191	18	191	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACCTAATAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	48941861	48906718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_48911220_48929410_48930646_48941709
ENSMUSG00000069893.11_0	chr11	-	3843	4	FSM	ENSMUSG00000069893.11	ENSMUST00000097494.9	3863	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGGACGAGGCTCGAGA	NA	NA	NA	NA	NA	NA	NA	NA	48870197	48836985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48839374_48857567_48858803_48869865_48870015_48870126
ENSMUSG00000069893.11_1	chr11	-	3779	3	ISM	ENSMUSG00000069893.11	ENSMUST00000097494.9	3863	4	191	5	191	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGGCTCGAGAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	48870017	48836981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_48839374_48857567_48858803_48869865
ENSMUSG00000069893.11_2	chr11	-	2397	3	FSM	ENSMUSG00000069893.11	ENSMUST00000093153.2	2403	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATCTTTTGTTGCGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	48870225	48856649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48858803_48869865_48870015_48870130
ENSMUSG00000069895.5_0	chr8	-	7508	4	FSM	ENSMUSG00000069895.5	ENSMUST00000093162.4	7526	4	18	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTTGCGCCTTTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	110464353	110453082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110460375_110461936_110461996_110462091_110462158_110464262
ENSMUSG00000069899.4_0	chr11	-	932	1	FSM	ENSMUSG00000069899.4	ENSMUST00000093169.3	958	1	7	19	7	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45943131	45942199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_45942200_45943100
ENSMUSG00000069910.3_0	chr11	-	2486	12	FSM	ENSMUSG00000069910.3	ENSMUST00000093191.3	2505	12	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTTCTATTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	34724455	34700022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_34700670_34704152_34704502_34709949_34710138_34710604_34710715_34711716_34711858_34713007_34713119_34713200_34713300_34713386_34713537_34714156_34714355_34716189_34716367_34721551_34721727_34724314
ENSMUSG00000069917.8_0	chr11	+	548	3	FSM	ENSMUSG00000069917.8	ENSMUST00000093207.4	554	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGGAAGAAGCCTGCATG	NA	NA	NA	NA	NA	NA	NA	NA	32246488	32247292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32246619_32246740_32246946_32247079
ENSMUSG00000069919.8_0	chr11	+	692	3	FSM	ENSMUSG00000069919.8	ENSMUST00000093209.4	699	3	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCCTGAGTAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	32233516	32234464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_32233802_32233923_32234129_32234262
ENSMUSG00000069920.11_0	chr8	-	2507	1	FSM	ENSMUSG00000069920.11	ENSMUST00000136822.3	2516	1	0	9	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATATGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105981785	105979278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105979300_105981800
ENSMUSG00000069920.11_1	chr8	-	2289	2	FSM	ENSMUSG00000069920.11	ENSMUST00000093217.9	2325	2	28	8	28	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATTATATGTTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	105981755	105979278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105981475_105981662
ENSMUSG00000069972.7_0	chr7	-	517	1	FSM	ENSMUSG00000069972.7	ENSMUST00000182017.2	453	1	-23	-41	-23	41	mono-exon	FALSE	NA	NA	NA	NA	NA	1138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	88180129	88179612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_88179600_88180100
ENSMUSG00000070000.14_0	chr8	-	2558	22	FSM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTAGTTGCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72171016	72161573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079_72170155_72170930
ENSMUSG00000070000.14_4	chr8	-	2474	21	ISM	ENSMUSG00000070000.14	ENST00000594202.5	2569	22	867	4	867	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTAGTTGCTGCCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	72170156	72161573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_72161735_72161973_72162030_72162218_72162419_72162637_72162771_72162982_72163139_72163641_72163751_72163848_72163937_72164036_72164144_72164694_72164938_72165113_72165209_72165543_72165596_72165944_72165970_72166058_72166317_72167343_72167417_72167526_72167572_72168120_72168218_72168328_72168428_72169200_72169306_72169415_72169569_72169785_72169928_72170079
ENSMUSG00000070002.8_0	chr8	+	3056	12	FSM	ENSMUSG00000070002.8	ENSMUST00000093454.8	3072	12	9	7	9	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTCTCTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	70992346	71045501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70992492_71025512_71025561_71031486_71031609_71031742_71031907_71034204_71034471_71036521_71036647_71037806_71037886_71038203_71038679_71043169_71043231_71043343_71043516_71044019_71044065_71044147
ENSMUSG00000070003.8_0	chr8	-	1467	17	FSM	ENSMUSG00000070003.8	ENSMUST00000049908.11	1475	17	7	1	7	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTACTGCTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	71060957	71050140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_71050419_71050662_71050771_71050855_71050885_71051188_71051268_71051351_71051423_71051503_71051559_71051642_71051679_71051767_71051814_71052023_71052095_71052174_71052246_71052337_71052408_71052489_71052550_71053045_71053136_71054881_71054967_71055050_71055113_71055223_71055297_71060774
ENSMUSG00000070044.16_0	chr8	-	5443	14	FSM	ENSMUSG00000070044.16	ENSMUST00000093526.13	5469	14	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATATAAAATGTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45835316	45789775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_45792410_45794019_45794099_45794192_45794322_45795427_45795552_45797494_45797699_45798008_45798122_45801478_45801634_45801987_45802179_45803437_45803609_45804699_45804826_45806855_45806999_45808268_45808408_45808658_45808767_45834189
ENSMUSG00000070047.15_4	chr8	+	14598	26	FSM	ENSMUSG00000070047.15	ENST00000614102.4	14621	26	9	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATTAATAAAATACTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45403250	45505267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_45406519_45441967_45442283_45460278_45460341_45462829_45463163_45463437_45463649_45466000_45466141_45470401_45470678_45470871_45471087_45475840_45479909_45480520_45480718_45482492_45482647_45483148_45483383_45484301_45484692_45486375_45486591_45486868_45487007_45488501_45488646_45489155_45489354_45489712_45490515_45491296_45491429_45492836_45492995_45493570_45494034_45494916_45495071_45495245_45495357_45496959_45497592_45498067_45498206_45503817
ENSMUSG00000070056.7_0	chr8	+	6387	3	FSM	ENSMUSG00000070056.7	ENSMUST00000037666.6	6408	3	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTTAAGCCGTGGTAG	NA	NA	NA	NA	NA	NA	NA	NA	36054962	36146593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_36058513_36131821_36131949_36143883
ENSMUSG00000070127.4_0	chr19	+	101	1	FSM	ENSMUSG00000070127.4	ENSMUST00000093619.4	109	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATCAACACCAAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	46331200	46331301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_46331200_46331300
ENSMUSG00000070282.7_0	chr9	-	1605	2	FSM	ENSMUSG00000070282.7	ENSMUST00000125451.2	1614	2	5	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCCACAAAAAACCAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	109661769	109659247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_109660498_109661414
ENSMUSG00000070283.5_0	chr9	-	1473	5	FSM	ENSMUSG00000070283.5	ENSMUST00000074208.6	1487	5	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGCATATACTGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	108444626	108442742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108443275_108443357_108443459_108443539_108443607_108443754_108443951_108444049
ENSMUSG00000070284.11_0	chr9	+	2692	9	FSM	ENSMUSG00000070284.11	ENSMUST00000112295.9	2702	9	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCTATGGTAACTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	107926447	107929997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_4	chr9	+	1416	10	FSM	ENSMUSG00000070284.11	ENSMUST00000047947.9	1429	10	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTAGCCTGGACTGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	107926530	107928895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107926620_107926710_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107927892_107927972_107928047_107928176_107928258_107928442_107928524
ENSMUSG00000070284.11_6	chr9	+	2198	7	FSM	ENSMUSG00000070284.11	ENST00000677393.1	2216	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGTGTGAACATTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	107926554	107929825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107926845_107926959_107927041_107927127_107927177_107927313_107927457_107927649_107927809_107928258_107928434_107928524
ENSMUSG00000070291.5_0	chr9	+	1914	16	FSM	ENSMUSG00000070291.5	ENST00000370336.5	1920	16	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTACTTTAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78306321	78330934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78306379_78308130_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_19	chr9	+	1850	15	ISM	ENSMUSG00000070291.5	ENST00000370336.5	1920	16	1816	6	-21	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTACTTTAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	78308137	78330934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_78308258_78309631_78309764_78313632_78313715_78318873_78319031_78319474_78319594_78320247_78320359_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493_78326633_78327870_78327959_78328979_78329112_78330733
ENSMUSG00000070291.5_31	chr9	+	1246	11	FSM	ENSMUSG00000070291.5	ENST00000510713.2	1258	11	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCAGGGTAAGCCAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	78308165	78326624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78308258_78313632_78313715_78318873_78319031_78319474_78319594_78320249_78320346_78321024_78321167_78321505_78321607_78323944_78324033_78325318_78325447_78325614_78325725_78326493
ENSMUSG00000070319.7_0	chr9	-	1014	10	ISM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	199	7	199	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	20809720	20805651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673
ENSMUSG00000070319.7_1	chr9	-	1089	11	FSM	ENSMUSG00000070319.7	ENSMUST00000004206.10	1101	11	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCACTTTGTCCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	20809914	20805651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20805739_20805928_20806036_20806128_20806266_20806384_20806493_20807123_20807314_20807411_20807517_20809002_20809063_20809183_20809273_20809379_20809464_20809673_20809721_20809839
ENSMUSG00000070343.4_0	chr3	-	516	1	FSM	ENSMUSG00000070343.4	ENSMUST00000084614.5	537	1	14	7	14	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAACTTGATCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	146545088	146544572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_146544600_146545100
ENSMUSG00000070348.6_0	chr7	-	3722	5	FSM	ENSMUSG00000070348.6	ENSMUST00000093962.5	3740	5	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTCAGCTCACTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	144493597	144483676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144486509_144487752_144487902_144491030_144491191_144491623_144491840_144493232
ENSMUSG00000070348.6_1	chr7	-	420	2	FSM	ENSMUSG00000070348.6	ENST00000536559.1	436	2	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAGTCTCATCAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	144493500	144487749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_144487902_144493232
ENSMUSG00000070354.14_0	chr11	-	3926	4	FSM	ENSMUSG00000070354.14	ENSMUST00000170422.4	3944	4	18	0	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGATTTTAAGGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	79421397	79404210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79407589_79414437_79414562_79418407_79418629_79421194
ENSMUSG00000070360.6_0	chr3	-	1005	7	FSM	ENSMUSG00000070360.6	ENST00000440059.1	1023	7	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGTAAGAATCTATAT	NA	NA	NA	NA	NA	NA	NA	NA	113323274	113316983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_113317164_113318740_113318867_113318974_113319094_113320260_113320361_113320452_113320576_113321252_113321387_113323051
ENSMUSG00000070371.12_0	chr7	-	3003	15	FSM	ENSMUSG00000070371.12	ENSMUST00000118755.8	3028	15	14	11	14	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATACAGACACGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	127545883	127531820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534673_127534838_127534936_127535176_127535496_127535627_127535760_127536011_127540208_127540376_127543813_127544095_127544408_127544572_127545009_127545046_127545222_127545262_127545583
ENSMUSG00000070371.12_1	chr7	-	3040	15	FSM	ENSMUSG00000070371.12	ENSMUST00000094026.10	3061	15	4	17	4	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATGTAAATACAGACAC	NA	NA	NA	NA	NA	NA	NA	NA	127545893	127531826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_127532287_127532542_127532665_127532738_127533005_127533310_127533453_127533561_127533800_127534673_127534838_127534936_127535209_127535496_127535627_127535760_127536011_127540208_127540376_127543813_127544095_127544408_127544572_127545009_127545046_127545222_127545262_127545583
ENSMUSG00000070372.12_0	chr3	-	3176	10	FSM	ENSMUSG00000070372.12	ENSMUST00000094028.10	3193	10	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2671	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAACAGCTCCTTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	104771810	104730100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104732441_104732722_104732786_104735842_104735915_104741413_104741493_104742040_104742121_104747097_104747305_104748143_104748208_104749976_104750029_104752233_104752298_104771655
ENSMUSG00000070394.11_0	chr11	+	470	4	FSM	ENSMUSG00000070394.11	ENSMUST00000094065.5	492	4	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCATATAAAGAACTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	69729357	69730430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_69729476_69729745_69729778_69730013_69730095_69730191
ENSMUSG00000070407.6_0	chr11	-	4886	2	FSM	ENSMUSG00000070407.6	ENSMUST00000094103.4	4911	2	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACATGTGAGTATGTTC	NA	NA	NA	NA	NA	NA	NA	NA	63813096	63776622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_63780572_63812159
ENSMUSG00000070425.14_0	chr7	+	3106	10	FSM	ENSMUSG00000099481.7	ENSMUST00000106950.8	3131	10	16	9	16	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGACAGTATGTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	101714733	101732960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101715012_101720393_101720569_101722381_101722524_101725003_101725160_101726955_101727135_101727939_101728026_101728211_101728385_101729735_101729812_101730689_101730818_101731247
ENSMUSG00000070425.14_1	chr7	+	3116	17	FSM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCTCCTGGAAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	101727959	101745414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101728026_101728211_101728385_101729735_101729812_101730750_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739827_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000070425.14_18	chr7	+	3045	16	ISM	ENSMUSG00000070425.14	ENST00000451043.6	3125	17	260	6	260	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCTCCTGGAAGGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	101728216	101745414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_101728385_101729735_101729812_101730750_101730818_101731247_101731399_101732179_101732226_101733073_101733788_101735604_101735818_101736722_101736888_101737322_101737498_101738307_101738509_101739119_101739283_101739729_101739827_101742736_101742930_101743434_101743563_101744374_101744512_101745063
ENSMUSG00000070426.13_0	chr7	-	2237	9	FSM	ENSMUSG00000070426.13	ENSMUST00000096639.12	2249	9	5	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCATTTGCCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101714360	101668350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714272
ENSMUSG00000070426.13_1	chr7	-	2151	8	ISM	ENSMUSG00000070426.13	ENSMUST00000106953.8	2545	9	17810	-988	17810	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACGCATTTGCCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101691873	101668350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833
ENSMUSG00000070426.13_2	chr7	-	2314	9	FSM	ENSMUSG00000070426.13	ENSMUST00000089052.11	2344	9	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGGACACGCATTTGC	NA	NA	NA	NA	NA	NA	NA	NA	101714646	101668358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101678218_101678340_101680700_101680809_101684513_101684669_101688756_101688899_101691833_101691872_101714473
ENSMUSG00000070426.13_3	chr7	-	757	4	ISM	ENSMUSG00000070426.13	ENST00000533380.5	846	5	25463	0	20783	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGGCCTAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	101688900	101669322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_101669700_101672518_101672621_101673219_101673354_101688756
ENSMUSG00000070426.13_4	chr7	-	840	5	FSM	ENSMUSG00000070426.13	ENST00000533380.5	846	5	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTAGGCCTAACCTTGC	NA	NA	NA	NA	NA	NA	NA	NA	101714357	101669322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101669700_101672518_101672621_101673219_101673354_101688756_101688899_101714272
ENSMUSG00000070436.13_0	chr7	-	2247	5	FSM	ENSMUSG00000070436.13	ENSMUST00000169437.9	2274	5	25	2	25	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACAAAGCCTGTGATTTA	NA	NA	NA	NA	NA	NA	NA	NA	99002296	98994584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088
ENSMUSG00000070436.13_12	chr7	-	1035	4	FSM	ENSMUSG00000070436.13	ENST00000530284.5	1039	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCGGAGGGTAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	99001077	98996128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98996365_98996472_98996572_98998009_98998663_99001030
ENSMUSG00000070436.13_13	chr7	-	982	3	ISM	ENSMUSG00000070436.13	ENST00000530284.5	1039	4	2421	4	2421	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCCGGAGGGTAGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	98998656	98996128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_98996365_98996472_98996572_98998009
ENSMUSG00000070436.13_2	chr7	-	2203	5	FSM	ENSMUSG00000070436.13	ENSMUST00000094154.6	2215	5	9	3	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTCTTTCTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	99002437	98994598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002259
ENSMUSG00000070436.13_4	chr7	-	2170	6	FSM	ENSMUSG00000070436.13	ENSMUST00000208119.2	2173	6	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCATTCTTTCTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	99002320	98994598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99002088_99002173_99002259
ENSMUSG00000070436.13_7	chr7	-	2117	6	FSM	ENSMUSG00000070436.13	ENSMUST00000207849.2	2128	6	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAGGTTCCCATATCATT	NA	NA	NA	NA	NA	NA	NA	NA	99002319	98994610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98995630_98996131_98996365_98996472_98996572_98998009_98998672_99001030_99001075_99002259
ENSMUSG00000070443.7_0	chr3	+	988	1	FSM	ENSMUSG00000070443.7	ENSMUST00000094175.7	999	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTAAGAAACCCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	78824569	78825557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_78824600_78825600
ENSMUSG00000070461.4_0	chr2	+	3343	1	FSM	ENSMUSG00000070461.4	ENSMUST00000189441.2	3352	1	5	4	5	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATACCTGACTGGTCTGG	NA	NA	NA	NA	NA	NA	NA	NA	180625721	180629064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_180625700_180629100
ENSMUSG00000070462.5_0	chr7	-	4427	1	FSM	ENSMUSG00000070462.5	ENSMUST00000094216.5	4433	1	6	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGAGTTTCTCACAGTT	NA	NA	NA	NA	NA	NA	NA	NA	83533507	83529080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_83529100_83533500
ENSMUSG00000070469.13_0	chr7	+	7230	30	FSM	ENSMUSG00000070469.13	ENSMUST00000173287.8	7249	30	5	14	5	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATCAAATAGAATCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	81984944	82263644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_81985119_81986392_81986495_82028700_82028821_82077541_82077670_82091641_82091688_82099246_82099484_82114771_82114899_82142544_82142620_82148805_82148964_82164182_82164295_82169925_82170065_82171195_82171247_82172336_82172542_82178041_82178190_82179760_82179846_82189513_82189804_82197081_82197212_82205972_82206166_82206268_82206449_82216127_82216282_82222903_82223979_82225172_82225301_82227702_82227832_82244560_82244744_82247243_82247361_82251321_82251506_82252926_82253132_82255693_82255792_82260869_82261082_82261599
ENSMUSG00000070493.4_0	chr5	-	899	4	FSM	ENSMUSG00000070493.4	ENSMUST00000094280.4	915	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGTGGTAGCGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	129916300	129910001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_129910238_129911269_129911421_129912774_129913025_129916038
ENSMUSG00000070498.4_0	chr5	+	3590	9	FSM	ENSMUSG00000070498.4	ENST00000299308.7	3603	9	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCACTGATGTCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	125699556	125866811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_125700417_125715245_125715393_125775627_125775815_125826298_125826443_125855700_125855907_125860393_125860665_125862904_125863097_125863995_125865474_125866706
ENSMUSG00000070498.4_10	chr5	+	2240	5	FSM	ENSMUSG00000070498.4	ENST00000613307.1	2256	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTCACTGATGTCAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	125855712	125866811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_125855907_125860393_125860665_125862904_125863097_125863995_125865474_125866706
ENSMUSG00000070509.16_0	chr7	+	3359	3	FSM	ENSMUSG00000070509.16	ENSMUST00000139780.3	3371	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGCTGTTGGAGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	73040985	73069646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_73041245_73058979_73059498_73067064
ENSMUSG00000070509.16_1	chr7	+	839	2	FSM	ENSMUSG00000070509.16	ENST00000557420.1	852	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGCCGTGGCCGCCGCCG	NA	NA	NA	NA	NA	NA	NA	NA	73041016	73067675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_73041245_73067064
ENSMUSG00000070520.5_1	chr7	-	5939	1	FSM	ENSMUSG00000070520.5	ENSMUST00000094331.5	5946	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	714	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTTTTTAATTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	64522738	64516799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_64516800_64522700
ENSMUSG00000070522.5_1	chr3	-	242	2	Genic_Genomic	ENSMUSG00000070522.5	novel	648	1	NA	NA	111	-217	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCGTCAGACCAAGCGG	NA	NA	NA	NA	NA	NA	NA	NA	28819398	28819078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr3_-_28819185_28819262
ENSMUSG00000070524.2_0	chr1	-	1054	4	FSM	ENSMUSG00000070524.2	ENST00000367946.7	1073	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCACTGTCATGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	170739838	170734876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170735273_170735419_170735566_170736200_170736468_170739593
ENSMUSG00000070524.2_1	chr1	-	1094	4	FSM	ENSMUSG00000070524.2	ENST00000336830.9	1114	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCACTGTCATGGAGGGC	NA	NA	NA	NA	NA	NA	NA	NA	170739837	170734876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_170735273_170735419_170735607_170736200_170736468_170739593
ENSMUSG00000070526.3_0	chr7	-	2619	1	FSM	ENSMUSG00000070526.3	ENSMUST00000094339.3	2640	1	13	8	13	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATTATACTTAAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	62114245	62111626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_62111600_62114200
ENSMUSG00000070544.7_0	chr2	+	3840	21	FSM	ENSMUSG00000070544.7	ENSMUST00000109468.3	3856	21	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGGAAACTTAGCGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	160487815	160564676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_160488183_160488527_160488553_160512019_160512123_160524570_160524695_160526367_160526424_160529567_160529664_160532196_160532273_160535615_160535723_160540043_160540160_160544621_160544744_160545491_160545615_160546702_160546891_160547096_160547242_160554564_160554709_160556000_160556187_160556965_160557035_160557632_160557748_160559306_160559435_160562498_160562594_160562846_160562997_160563371
ENSMUSG00000070564.16_0	chr7	+	1464	6	FSM	ENSMUSG00000070564.16	ENST00000270235.11	1480	6	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCACACGGAGCCCTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	45335609	45343783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45336250_45340470_45340660_45340835_45340986_45341307_45341362_45341764_45341846_45343433
ENSMUSG00000070565.12_0	chr1	-	10013	18	FSM	ENSMUSG00000070565.12	ENSMUST00000078308.13	10047	18	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAGAGTTGCTACTAT	NA	NA	NA	NA	NA	NA	NA	NA	157240139	156962759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986429_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ENSMUSG00000070565.12_1	chr1	-	4001	18	FSM	ENSMUSG00000070565.12	ENSMUST00000132699.8	4013	18	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGATGCTTTTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	157239498	156968109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_156968446_156973759_156973848_156975199_156975403_156977342_156977478_156984475_156985338_156986228_156986408_156988694_156988897_156991272_156991510_156992176_156992322_157001712_157001858_157003232_157003788_157005215_157005315_157006668_157006823_157020316_157020427_157057608_157057716_157114300_157114425_157126706_157126835_157239306
ENSMUSG00000070583.2_0	chr4	+	1342	1	FSM	ENSMUSG00000070583.2	ENSMUST00000094481.2	1380	1	24	14	24	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAACAGTTAAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	147953459	147954801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_147953500_147954800
ENSMUSG00000070604.6_0	chr7	+	3820	10	FSM	ENSMUSG00000070604.6	ENSMUST00000107977.4	3836	10	6	10	6	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGAAATGTGCTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	43112580	43121433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43112697_43112783_43113600_43114229_43114524_43114644_43114930_43115789_43116045_43116850_43117130_43117377_43117675_43118079_43118194_43118383_43118539_43120224
ENSMUSG00000070639.6_0	chr5	+	6693	5	FSM	ENSMUSG00000070639.6	ENSMUST00000112707.3	6726	5	22	11	22	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCACTAGAATCTGATTGG	NA	NA	NA	NA	NA	NA	NA	NA	105563662	105637929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_105563779_105616662_105616718_105624051_105624151_105627632_105629795_105633668
ENSMUSG00000070687.12_0	chr4	+	2891	2	FSM	ENSMUSG00000070687.12	ENSMUST00000088677.5	2904	2	6	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGACACAGCGAGCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	136150840	136171702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_136151087_136169057
ENSMUSG00000070691.11_0	chr4	+	3865	6	FSM	ENSMUSG00000070691.11	ENSMUST00000056977.14	3884	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCGCGTCAGGCTTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	134847975	134905295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134848475_134880098_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070691.11_1	chr4	+	1484	7	FSM	ENSMUSG00000070691.11	ENST00000338888.3	1494	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTCTCGGGCCAGCCGAA	NA	NA	NA	NA	NA	NA	NA	NA	134848017	134903152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134848125_134848320_134848475_134880098_134880368_134882592_134882750_134890541_134890647_134898419_134898570_134902610
ENSMUSG00000070697.5_0	chr5	+	1602	1	FSM	ENSMUSG00000070697.5	ENSMUST00000090413.6	1629	1	16	11	16	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	942	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAAGTGATTGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	88702336	88703938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_88702300_88703900
ENSMUSG00000070699.6_0	chr7	+	1552	15	FSM	ENSMUSG00000070699.6	ENST00000221431.11	1557	15	5	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGATGACAGCTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	28441428	28452989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28441708_28443666_28443786_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070699.6_2	chr7	+	1852	16	FSM	ENSMUSG00000070699.6	ENSMUST00000094632.6	1868	16	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATGAGCACAGGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	28441435	28453289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_28441708_28443666_28443763_28445876_28445907_28446165_28446307_28446383_28446439_28446911_28446976_28447256_28447363_28448379_28448428_28449001_28449111_28449305_28449352_28449435_28449524_28449606_28449717_28451666_28451761_28451850_28451944_28452027_28452094_28452855
ENSMUSG00000070705.4_0	chr7	+	1738	1	FSM	ENSMUSG00000070705.4	ENSMUST00000094651.4	1751	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATCTGGGTTGTTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	27977176	27978914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27977200_27978900
ENSMUSG00000070709.13_0	chr7	-	5126	4	FSM	ENSMUSG00000070709.13	ENSMUST00000098639.9	5158	4	26	6	26	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAGGAAAAGAAAGTTATA	NA	NA	NA	NA	NA	NA	NA	NA	27628829	27606822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27611687_27620121_27620221_27626825_27626879_27628719
ENSMUSG00000070730.12_0	chr2	-	2228	13	FSM	ENSMUSG00000070730.12	ENSMUST00000094695.12	2249	13	12	9	12	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAAGGATATGTTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	118987503	118967490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_118968234_118968827_118968909_118969519_118969574_118969832_118969932_118970524_118970603_118970740_118970817_118973108_118973170_118976818_118976922_118977789_118978076_118983856_118984001_118984370_118984564_118986838_118987033_118987387
ENSMUSG00000070733.14_0	chr5	-	11459	63	FSM	ENSMUSG00000070733.14	ENST00000358350.9	11477	63	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTTAAGAAGAAAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	73413928	73177521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_73179641_73179844_73180036_73181230_73181342_73184648_73184728_73190100_73190200_73190938_73191089_73192288_73192497_73198688_73198937_73204862_73205028_73207644_73207849_73211395_73211573_73211872_73211948_73212058_73212221_73212867_73213066_73215066_73215208_73216721_73216893_73221848_73221947_73222281_73222890_73224616_73224712_73226066_73226258_73227225_73227348_73228447_73228653_73230078_73230265_73231184_73231289_73231971_73232123_73233230_73233344_73234000_73234086_73238306_73238476_73240139_73240281_73240470_73240731_73242689_73242859_73243869_73243970_73244220_73244376_73245711_73245823_73246437_73246599_73247943_73248117_73250465_73250558_73252758_73252817_73253616_73253742_73254716_73254913_73255501_73255771_73257288_73257376_73257628_73257815_73258796_73259035_73262017_73262126_73265305_73265439_73265812_73265985_73267528_73267616_73269705_73269815_73270091_73270196_73275826_73275929_73277160_73277260_73279206_73279300_73279555_73279725_73282025_73282107_73282857_73282938_73289813_73289911_73290588_73290729_73293664_73293719_73305359_73305566_73352328_73352457_73378250_73378416_73413742
ENSMUSG00000070738.11_0	chr1	+	5669	30	FSM	ENSMUSG00000070738.11	ENSMUST00000027517.14	5695	30	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCCAGTGAGCATTCCT	NA	NA	NA	NA	NA	NA	NA	NA	87781026	87872204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87781179_87808089_87808201_87809580_87809662_87842821_87842927_87843213_87843347_87844090_87844198_87844528_87844655_87845613_87845717_87846280_87846444_87849294_87849404_87851793_87851934_87852201_87852287_87853415_87853511_87853594_87853695_87853772_87854047_87854587_87854747_87855406_87855533_87857462_87857560_87859653_87859765_87861827_87861925_87862115_87862224_87863059_87863174_87864005_87864141_87864470_87864623_87865875_87865988_87866067_87866161_87866917_87867038_87867898_87868029_87869090_87869222_87870104
ENSMUSG00000070780.12_0	chr5	-	4879	8	FSM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTTTCAAGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66309256	66173904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881_66309045_66309197
ENSMUSG00000070780.12_2	chr5	-	4821	7	ISM	ENSMUSG00000070780.12	ENSMUST00000167950.8	4895	8	222	5	222	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTTTCAAGACTTTC	NA	NA	NA	NA	NA	NA	NA	NA	66309045	66173904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66308881
ENSMUSG00000070780.12_4	chr5	-	3150	7	FSM	ENSMUSG00000070780.12	ENSMUST00000200775.4	3180	7	6	24	6	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTTTAAAATGAGGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66308415	66175968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_66176780_66179970_66180177_66182295_66182503_66183472_66184633_66203429_66203557_66255049_66255132_66307858
ENSMUSG00000070802.6_0	chr7	+	4138	1	FSM	ENSMUSG00000070802.6	ENSMUST00000094807.6	4147	1	8	1	8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTCTCTGTGGTCTGGA	NA	NA	NA	NA	NA	NA	NA	NA	16678614	16682752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_16678600_16682800
ENSMUSG00000070815.4_0	chr7	-	5306	3	FSM	ENSMUSG00000070815.4	ENSMUST00000227443.2	5319	3	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTTGAAAAAATATGTCC	NA	NA	NA	NA	NA	NA	NA	NA	12874080	12864839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12866545_12867813_12871298_12873963
ENSMUSG00000070858.13_0	chr5	+	468	4	FSM	ENSMUSG00000070858.13	ENSMUST00000094869.12	477	4	4	5	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCTGTGTCCTGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	34140780	34142352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34140909_34141100_34141241_34141395_34141485_34142241
ENSMUSG00000070858.13_1	chr5	+	498	4	FSM	ENSMUSG00000070858.13	ENSMUST00000114383.8	511	4	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGCCTGTGTCCTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	34140822	34142349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_34140984_34141100_34141241_34141395_34141485_34142241
ENSMUSG00000070867.5_0	chr4	+	6570	7	FSM	ENSMUSG00000070867.5	ENSMUST00000094894.4	6617	7	40	7	40	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGACCCTGGTGTTACT	NA	NA	NA	NA	NA	NA	NA	NA	114263960	114472288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_114264117_114266089_114266651_114437487_114437635_114443654_114443830_114457069_114457161_114459939_114460213_114467121
ENSMUSG00000070871.11_0	chr1	+	2913	10	FSM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAAATATGGCGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	64730509	64764795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_64730560_64740127_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ENSMUSG00000070871.11_1	chr1	+	2864	9	ISM	ENSMUSG00000070871.11	ENSMUST00000094898.5	2923	10	9622	5	9622	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAAAATATGGCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	64740125	64764794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_64740203_64741504_64741540_64747536_64747638_64750576_64750613_64752269_64752322_64753727_64753848_64757289_64757457_64760785_64760949_64762681
ENSMUSG00000070880.11_0	chr2	+	3674	18	FSM	ENSMUSG00000070880.11	ENST00000625689.2	3691	18	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAGAATTTGTACCCATT	NA	NA	NA	NA	NA	NA	NA	NA	70392165	70432353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_70392677_70394111_70394255_70397529_70397593_70403049_70403209_70404412_70404656_70409454_70409546_70416177_70416291_70417466_70417583_70417666_70417747_70417977_70418033_70420116_70420245_70420867_70420961_70421449_70421515_70423775_70423855_70424967_70425118_70427505_70427614_70429952_70430043_70430966
ENSMUSG00000070890.4_0	chr4	+	1439	3	FSM	ENSMUSG00000070890.4	ENSMUST00000052027.8	1452	3	3	10	3	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTTTGATTCTGGATGC	NA	NA	NA	NA	NA	NA	NA	NA	101797606	101800370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_101797891_101798317_101798903_101799800
ENSMUSG00000070908.2_0	chr4	+	2825	1	FSM	ENSMUSG00000070908.2	ENSMUST00000094977.2	2850	1	16	9	16	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATACCTGAAAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	88723783	88726608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_88723800_88726600
ENSMUSG00000070923.5_0	chr4	-	4157	1	FSM	ENSMUSG00000070923.5	ENSMUST00000094993.3	4174	1	9	8	9	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	1418	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATATTTTCTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	88640693	88636536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_88636500_88640700
ENSMUSG00000070934.7_0	chr4	+	1595	1	FSM	ENSMUSG00000070934.7	ENSMUST00000091064.8	1618	1	11	12	11	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	591	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATTTAAAATGTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	86493915	86495510	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_86493900_86495500
ENSMUSG00000070939.10_0	chr1	-	5588	13	FSM	ENSMUSG00000070939.10	ENSMUST00000095014.8	5607	13	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATACTGCCTCACTCTA	NA	NA	NA	NA	NA	NA	NA	NA	43137768	43086364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43136011_43136210_43137429
ENSMUSG00000070939.10_1	chr1	-	5359	12	FSM	ENSMUSG00000070939.10	ENSMUST00000186694.7	5385	12	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGCTGAAGTACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	43131871	43086387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43088996_43090717_43091152_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410_43115113_43131540
ENSMUSG00000070939.10_2	chr1	-	2674	11	FSM	ENSMUSG00000070939.10	ENST00000258449.2	2690	11	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAGATGCTATCCCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	43115102	43088725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_43088996_43090717_43091146_43092570_43092731_43093678_43093826_43095771_43095916_43098257_43098316_43099039_43099382_43101676_43101760_43106633_43106789_43110620_43110816_43114410
ENSMUSG00000070953.14_0	chr2	-	2947	8	FSM	ENSMUSG00000070953.14	ENSMUST00000145903.8	2968	8	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTTGCAATGTAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	34689915	34667579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689762
ENSMUSG00000070953.14_11	chr2	-	1418	8	FSM	ENSMUSG00000070953.14	ENSMUST00000118108.2	1431	8	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATAAAGCCCACATTTG	NA	NA	NA	NA	NA	NA	NA	NA	34689732	34669253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675741_34680514_34680668_34685183_34685342_34687386_34687446_34689434
ENSMUSG00000070953.14_3	chr2	-	1192	7	FSM	ENSMUSG00000070953.14	ENST00000628863.2	1198	7	0	6	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34687448	34669229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675786_34680514_34680668_34685183_34685342_34687386
ENSMUSG00000070953.14_4	chr2	-	1125	6	ISM	ENSMUSG00000070953.14	ENST00000628863.2	1198	7	2112	6	2112	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGTGACTTTTTACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34685336	34669229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_34669542_34670608_34670759_34674557_34674708_34675578_34675786_34680514_34680668_34685183
ENSMUSG00000070960.5_0	chr1	+	794	2	Genic_Genomic	ENSMUSG00000070960.5	novel	1513	1	NA	NA	155	-311	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTGACAGGAAACCCACA	NA	NA	NA	NA	NA	NA	NA	NA	31654384	31655431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr1_+_31655076_31655328
ENSMUSG00000070972.14_0	chr4	+	4005	4	FSM	ENSMUSG00000070972.14	ENSMUST00000095070.4	4023	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	419	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTTGCTATTAGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	59003183	59025567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59003558_59017669_59017823_59020058_59020530_59022560
ENSMUSG00000070995.11_0	chr6	-	2539	3	FSM	ENSMUSG00000070995.11	ENSMUST00000150112.8	2562	3	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTATGTATGTGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	148515790	148508289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_148510681_148511134_148511204_148515711
ENSMUSG00000071001.5_0	chr4	+	1449	1	FSM	ENSMUSG00000071001.5	ENSMUST00000095109.5	1452	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATGAAGGGGAAGGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	43727190	43728639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43727200_43728600
ENSMUSG00000071014.11_0	chr4	-	634	4	FSM	ENSMUSG00000071014.11	ENSMUST00000095128.10	659	4	11	14	-1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTAAACAGAGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	40279410	40270604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_40270848_40272809_40272855_40277652_40277746_40279157
ENSMUSG00000071015.3_0	chr4	-	788	3	FSM	ENSMUSG00000071015.3	ENST00000608326.1	809	3	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCAAAACCGGTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	34752388	34743800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_34744289_34746455_34746652_34752284
ENSMUSG00000071019.12_0	chr4	-	908	6	FSM	ENSMUSG00000071019.12	ENST00000524136.6	924	6	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTCAGCCATTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	4076862	4056782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070011_4076572
ENSMUSG00000071019.12_1	chr4	-	911	6	FSM	ENSMUSG00000071019.12	ENSMUST00000095151.12	1834	6	69	854	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGCTCAGCCATTGACCA	NA	NA	NA	NA	NA	NA	NA	NA	4076862	4056782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_4056905_4058760_4058887_4062618_4062764_4063220_4063321_4069885_4070018_4076576
ENSMUSG00000071037.7_0	chr17	+	1572	11	NNC	ENSMUSG00000071037.7	novel	1595	11	NA	NA	16	-8	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTCAATTAATTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	85397995	85766008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_+_85398292_85403917_85404091_85421210_85421277_85699000_85699062_85700885_85700941_85702029_85702094_85709853_85709921_85738898_85738974_85746954_85747019_85759623_85759756_85765489
ENSMUSG00000071042.13_0	chr17	+	4675	18	FSM	ENSMUSG00000071042.13	ENSMUST00000095204.6	4720	18	24	21	24	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACATACACAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	75772504	75836028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_75772656_75795811_75795945_75798752_75798956_75801141_75801245_75803376_75803440_75803934_75804067_75805378_75805527_75807053_75807228_75807634_75807752_75810108_75810385_75816739_75816818_75818973_75819091_75821072_75821189_75823324_75823473_75831143_75831181_75831460_75831587_75831885_75832248_75833837
ENSMUSG00000071047.6_0	chr8	-	1960	14	FSM	ENSMUSG00000071047.6	ENSMUST00000095211.5	1980	14	14	6	14	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAATCAGCGTCTGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	93774806	93746847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_93747224_93747515_93747589_93748968_93749101_93751823_93751972_93752194_93752276_93753921_93754063_93757692_93757732_93759234_93759340_93760555_93760661_93762579_93762734_93766076_93766211_93768590_93768736_93771538_93771744_93774684
ENSMUSG00000071054.13_0	chr17	+	3103	21	FSM	ENSMUSG00000071054.13	ENSMUST00000182533.8	3122	21	12	7	12	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAATTTGTTTTCATTT	NA	NA	NA	NA	NA	NA	NA	NA	56891985	56913212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912550_56912658_56912796_56912864_56912975
ENSMUSG00000071054.13_4	chr17	+	3095	21	FSM	ENSMUSG00000071054.13	ENSMUST00000095224.11	3106	21	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCAGACTTTCAACCTCT	NA	NA	NA	NA	NA	NA	NA	NA	56892068	56913293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_56892351_56895781_56895867_56900689_56900755_56900834_56901042_56902651_56902715_56904787_56904816_56905643_56906221_56906622_56906673_56907337_56907433_56907821_56907972_56908047_56908131_56908226_56908367_56908442_56908532_56909876_56909984_56910531_56910823_56911145_56911284_56911365_56911409_56912283_56912400_56912556_56912658_56912796_56912864_56912975
ENSMUSG00000071064.16_13	chr8	+	4083	15	FSM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGCCGCGTTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	79755300	79917114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914782_79914811_79916295
ENSMUSG00000071064.16_16	chr8	+	4082	14	FSM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAAAACCAAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79755303	79917131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_26	chr8	+	4024	13	ISM	ENSMUSG00000071064.16	ENST00000656985.1	4085	14	31581	0	31581	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACCAAAAACCAAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	79786881	79917131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912996_79916295
ENSMUSG00000071064.16_28	chr8	+	4022	14	ISM	ENSMUSG00000071064.16	ENST00000652097.1	4086	15	31581	3	31581	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACAGCCGCGTTCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	79786881	79917114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_79787920_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914782_79914811_79916295
ENSMUSG00000071064.16_3	chr8	+	3125	14	FSM	ENSMUSG00000071064.16	ENST00000513320.5	3150	14	10	15	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCAAGAGACAGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	79755243	79917135	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79755359_79796999_79797173_79802686_79803168_79818461_79818696_79844803_79845044_79847111_79847170_79863188_79863293_79902461_79902600_79905536_79905709_79906673_79906841_79912226_79912419_79912804_79912983_79914777_79914811_79916295
ENSMUSG00000071064.16_9	chr8	+	2274	5	FSM	ENSMUSG00000071064.16	ENST00000513840.2	2285	5	2	9	2	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTGGTAGGAGCGACA	NA	NA	NA	NA	NA	NA	NA	NA	79755283	79813133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79755359_79786878_79787920_79796999_79797173_79802686_79803168_79812629
ENSMUSG00000071065.7_0	chr10	-	3682	2	FSM	ENSMUSG00000071065.7	ENSMUST00000213239.2	3724	2	33	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGTAAGGGTATGGGCTAG	NA	NA	NA	NA	NA	NA	NA	NA	129577757	129571448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_129574807_129577433
ENSMUSG00000071072.13_0	chr10	+	2069	8	FSM	ENSMUSG00000071072.13	ENST00000614328.4	2077	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTTTCACTCCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	127894771	127913122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127895156_127904503_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_10	chr10	+	1546	7	FSM	ENSMUSG00000071072.13	ENSMUST00000084771.3	1559	7	8	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTGTTGGAAGATTT	NA	NA	NA	NA	NA	NA	NA	NA	127894887	127912842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_11	chr10	+	1010	7	FSM	ENSMUSG00000071072.13	ENST00000448157.6	1027	7	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTCATCATAACACA	NA	NA	NA	NA	NA	NA	NA	NA	127894893	127912285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127911206_127911232_127911935
ENSMUSG00000071072.13_14	chr10	+	934	7	FSM	ENSMUSG00000071072.13	ENST00000436399.6	953	7	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCATGGATTTAAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	127895010	127912362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071072.13_3	chr10	+	1989	8	FSM	ENSMUSG00000071072.13	ENSMUST00000052798.14	2000	8	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	5340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCAGTGTCACCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	127894831	127913139	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127895156_127904540_127904655_127905084_127905155_127906002_127906102_127907936_127908027_127910090_127910154_127911206_127911232_127911935
ENSMUSG00000071073.6_0	chr17	+	1994	6	FSM	ENSMUSG00000071073.6	ENSMUST00000233692.2	2010	6	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACTCCACAACCTGACT	NA	NA	NA	NA	NA	NA	NA	NA	46564462	46568224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46565543_46566104_46566266_46566584_46566708_46567108_46567210_46567573_46567797_46567918
ENSMUSG00000071074.10_0	chr17	+	2009	9	FSM	ENSMUSG00000071074.10	ENSMUST00000095263.10	2035	9	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1578	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAAACCTGCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	46559018	46563450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_46559255_46559766_46559965_46560104_46560212_46561336_46561383_46561495_46561589_46561719_46561852_46562039_46562154_46562289_46562414_46562491
ENSMUSG00000071076.9_0	chr8	+	1646	1	FSM	ENSMUSG00000071076.9	ENSMUST00000095267.8	1667	1	15	6	15	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	154	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGCCAGCTTGGCTGTCCGC	NA	NA	NA	NA	NA	NA	NA	NA	71151613	71153259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71151600_71153300
ENSMUSG00000071078.7_0	chr8	+	1054	4	FSM	ENSMUSG00000071078.7	ENSMUST00000211898.2	1078	4	7	17	-7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATGTTAAAAAAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	70583989	70586381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70584250_70584567_70584659_70585236_70585305_70585746
ENSMUSG00000071078.7_1	chr8	+	1142	5	FSM	ENSMUSG00000071078.7	ENSMUST00000095273.7	1161	5	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATGTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70584003	70586377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70584250_70584567_70584659_70585061_70585168_70585236_70585305_70585746
ENSMUSG00000071141.8_0	chr6	+	428	1	FSM	ENSMUSG00000071141.8	ENSMUST00000120093.2	321	1	-44	-63	-44	63	mono-exon	FALSE	NA	NA	NA	NA	NA	100	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTGTTAATGATAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	136465760	136466188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_136465800_136466200
ENSMUSG00000071172.14_0	chr17	+	2601	6	FSM	ENSMUSG00000071172.14	ENSMUST00000130216.3	2618	6	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	6355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGGTTGGAGTATAT	NA	NA	NA	NA	NA	NA	NA	NA	29251611	29262340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29251761_29255214_29255423_29257463_29257599_29259748_29259788_29260180_29260268_29260357
ENSMUSG00000071176.11_0	chr8	+	5513	29	FSM	ENSMUSG00000071176.11	ENSMUST00000084207.12	5528	29	4	11	4	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTATTTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	14961666	15051074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14992609_14992727_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ENSMUSG00000071176.11_6	chr8	+	5325	28	FSM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTATTTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	14961737	15051074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_14961764_14975049_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ENSMUSG00000071176.11_9	chr8	+	5294	27	ISM	ENSMUSG00000071176.11	ENSMUST00000110800.9	5336	28	13317	11	13317	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATACAGTATTTCAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	14975054	15051074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_14975221_14978771_14978937_14979963_14980246_14982356_14982421_14984769_14984847_14986740_14986798_14990208_14990373_14995279_14995395_14997156_14997264_15004434_15004513_15004748_15004929_15006862_15006980_15008563_15008657_15011114_15011286_15012517_15012664_15014086_15014263_15024975_15025092_15025569_15025698_15025887_15025989_15027547_15027670_15028436_15028524_15029799_15030027_15030551_15030710_15033769_15033913_15041059_15041235_15047541_15047665_15049318
ENSMUSG00000071180.6_0	chr13	+	1913	3	FSM	ENSMUSG00000071180.6	ENSMUST00000095458.6	1918	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGAGGTCCTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108180979	108185701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108181021_108182958_108183103_108183973
ENSMUSG00000071180.6_2	chr13	+	2077	3	FSM	ENSMUSG00000071180.6	ENSMUST00000225972.2	2097	3	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGAGGTCCTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108181037	108185701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108181243_108182958_108183103_108183973
ENSMUSG00000071180.6_3	chr13	+	1866	2	FSM	ENSMUSG00000071180.6	ENSMUST00000224361.2	830	2	20	-1056	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGAGGTCCTGAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108182964	108185701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_108183103_108183973
ENSMUSG00000071202.6_0	chr17	+	1644	13	FSM	ENSMUSG00000071202.6	ENSMUST00000095500.5	1651	13	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCACAGAGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	26005555	26009482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_26005680_26005835_26005953_26006040_26006128_26006351_26006469_26006725_26006815_26006926_26007006_26007090_26007217_26007669_26007846_26007971_26008054_26008212_26008293_26008759_26008827_26008898_26009000_26009083
ENSMUSG00000071252.7_0	chr13	+	5050	20	FSM	ENSMUSG00000071252.7	ENSMUST00000168779.3	5051	20	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTTTGATCTTTATGA	NA	NA	NA	NA	NA	NA	NA	NA	77283659	77761903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_77283750_77322971_77323104_77331719_77331889_77340672_77341343_77393319_77393482_77402241_77402337_77407959_77408188_77410007_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421_77480578_77482387_77482483_77760645
ENSMUSG00000071252.7_9	chr13	+	3577	17	NIC	ENSMUSG00000071252.7	novel	5051	20	NA	NA	11	-7	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAGGTATGTGGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	77322998	77480570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_77323104_77331719_77331889_77340672_77341343_77393319_77393482_77402241_77402337_77407959_77408192_77410007_77410274_77411650_77411802_77415780_77415972_77417880_77418064_77429160_77429272_77446585_77446726_77451414_77451580_77464466_77464692_77471483_77471890_77475985_77476143_77480421
ENSMUSG00000071253.9_0	chr10	+	3128	9	FSM	ENSMUSG00000071253.9	ENSMUST00000044977.10	3145	9	16	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGATGGCTTGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	62756427	62782276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778499_62780093
ENSMUSG00000071253.9_2	chr10	+	1124	9	FSM	ENSMUSG00000071253.9	ENST00000609923.6	1140	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTTAAAACATTAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	62756432	62781891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62778429_62778443_62781651
ENSMUSG00000071253.9_3	chr10	+	1117	8	NIC	ENSMUSG00000071253.9	novel	1140	9	NA	NA	8	-2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAACATTAAAATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	62756430	62781895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_+_62756661_62764074_62764168_62766081_62766216_62768497_62768562_62773196_62773319_62773706_62773774_62776820_62776984_62781651
ENSMUSG00000071256.5_0	chr17	-	2678	6	FSM	ENSMUSG00000071256.5	ENSMUST00000095606.5	2686	6	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTGACTCTTTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	23783206	23775742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23777287_23778356_23778523_23778607_23778679_23778958_23779077_23780119_23780635_23782942
ENSMUSG00000071266.14_0	chr17	+	2912	7	FSM	ENSMUSG00000071266.14	ENSMUST00000120222.8	2926	7	5	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTTAGACTTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	22643244	22675661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_22643411_22647461_22647547_22663148_22663273_22665777_22665875_22670077_22670134_22672432_22672560_22673404
ENSMUSG00000071267.12_0	chr17	-	3242	6	FSM	ENSMUSG00000071267.12	ENSMUST00000091879.12	3265	6	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAACAAGTTGGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	22181418	22145949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22148471_22149346_22149474_22151973_22152095_22160706_22160832_22172868_22173035_22181236
ENSMUSG00000071281.13_0	chr13	-	3947	4	FSM	ENSMUSG00000071281.13	ENSMUST00000073157.15	3957	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCAAGTTGTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	67877288	67853433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67857049_67858433_67858530_67858999_67859127_67877179
ENSMUSG00000071291.11_0	chr13	-	2284	4	FSM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	13	3	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	67648609	67638288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648529
ENSMUSG00000071291.11_1	chr13	-	2206	3	ISM	ENSMUSG00000071291.11	ENSMUST00000171518.8	2300	4	5772	3	5772	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	67642850	67638288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67640270_67642125_67642222_67642721
ENSMUSG00000071291.11_2	chr13	-	2380	4	FSM	ENSMUSG00000071291.11	ENSMUST00000076123.12	2391	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTGTCTTTGGTCATGC	NA	NA	NA	NA	NA	NA	NA	NA	67648665	67638288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67640270_67642125_67642222_67642721_67642849_67648489
ENSMUSG00000071302.11_0	chr8	-	1755	5	FSM	ENSMUSG00000071302.11	ENSMUST00000190157.7	1776	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAGAATAAGAATGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	129960517	129942845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_129944231_129946582_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUSG00000071302.11_1	chr8	-	2326	4	FSM	ENSMUSG00000071302.11	ENSMUST00000186619.7	2337	4	10	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTGCAGAAGATCATGT	NA	NA	NA	NA	NA	NA	NA	NA	129960489	129944598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_129946633_129948024_129948086_129948304_129948432_129960385
ENSMUSG00000071317.5_0	chr10	+	4354	8	FSM	ENSMUSG00000071317.5	ENSMUST00000095715.5	4368	8	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAGAAAAATGTGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	45211875	45248569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45211978_45215315_45215553_45219129_45219255_45222222_45222411_45223880_45223990_45229845_45230014_45230846_45230989_45245286
ENSMUSG00000071324.12_0	chr10	-	1121	3	FSM	ENSMUSG00000071324.12	ENSMUST00000162405.8	1135	3	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTAACGAGAATCCTG	NA	NA	NA	NA	NA	NA	NA	NA	41894371	41875812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_41876495_41887763_41888020_41894188
ENSMUSG00000071337.12_0	chr6	+	1776	14	FSM	ENSMUSG00000071337.12	ENSMUST00000095754.10	1789	14	4	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGTCCTCGCCGCATCAG	NA	NA	NA	NA	NA	NA	NA	NA	86381204	86408174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222_86407334_86407817
ENSMUSG00000071337.12_1	chr6	+	4461	13	FSM	ENSMUSG00000071337.12	ENSMUST00000095753.9	4477	13	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGCCATTTCTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	86381207	86410378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86396082_86396116_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUSG00000071337.12_4	chr6	+	3119	12	FSM	ENSMUSG00000071337.12	ENSMUST00000095752.9	3130	12	4	7	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTATTTCTTTGTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	86381298	86409160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86381505_86390785_86390883_86393284_86393384_86395859_86395915_86397305_86397394_86401326_86401403_86401943_86402053_86402431_86402528_86402642_86402728_86403548_86403673_86404654_86404801_86407222
ENSMUSG00000071347.4_0	chr14	+	473	4	FSM	ENSMUSG00000071347.4	ENST00000382145.5	489	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGCTCTTGACACAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	61009748	61017461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_61009912_61014473_61014537_61016700_61016737_61017250
ENSMUSG00000071350.13_0	chr14	-	2968	14	FSM	ENSMUSG00000071350.13	ENSMUST00000161459.8	2995	14	12	15	3	3	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTATACTAGAATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	59678321	59639472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663937_59664004_59668591_59668718_59674885_59675215_59678035
ENSMUSG00000071350.13_2	chr14	-	2688	13	FSM	ENSMUSG00000071350.13	ENST00000354234.8	2709	13	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATATTAATATAAAATTAT	NA	NA	NA	NA	NA	NA	NA	NA	59675205	59639484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_59639866_59644094_59644184_59646626_59646968_59649539_59649634_59650160_59650261_59650929_59651129_59653147_59653318_59654857_59654975_59656449_59657011_59660836_59660934_59663910_59664004_59668591_59668718_59674885
ENSMUSG00000071359.14_0	chr10	-	2857	7	FSM	ENSMUSG00000071359.14	ENSMUST00000127698.8	2873	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATCCAAGTTTTAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	22607338	22579785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607014
ENSMUSG00000071359.14_1	chr10	-	1195	7	FSM	ENSMUSG00000071359.14	ENSMUST00000095794.4	1195	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATCTCTCTTCATATC	NA	NA	NA	NA	NA	NA	NA	NA	22607837	22581279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22581795_22583487_22583583_22583669_22583774_22585044_22585109_22585255_22585339_22587812_22587991_22607681
ENSMUSG00000071379.3_0	chr12	+	1503	4	FSM	ENSMUSG00000071379.3	ENSMUST00000071858.5	1526	4	9	14	9	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAATAAACCAAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	17740865	17841920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17741048_17836147_17836550_17837545_17837652_17841107
ENSMUSG00000071415.7_0	chr11	-	1047	5	FSM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	9480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTTTCTGTGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	97673256	97668357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631_97672716_97673169
ENSMUSG00000071415.7_1	chr11	-	962	4	ISM	ENSMUSG00000071415.7	ENSMUST00000103146.5	1059	5	546	5	546	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTTTCTGTGAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	97672717	97668357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_97668991_97669090_97669205_97672159_97672289_97672631
ENSMUSG00000071451.11_0	chr13	+	451	2	FSM	ENSMUSG00000071451.11	ENSMUST00000124996.8	474	2	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTTCATTTTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	34346969	34362151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34347233_34361963
ENSMUSG00000071451.11_1	chr13	+	544	3	FSM	ENSMUSG00000071451.11	ENSMUST00000147632.3	555	3	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCATTTTACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	34346955	34362154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34347233_34350043_34350120_34361963
ENSMUSG00000071451.11_2	chr13	+	529	3	FSM	ENSMUSG00000071451.11	ENST00000419065.6	547	3	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACGTGTATATAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	34347040	34362104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34347233_34350043_34350199_34361922
ENSMUSG00000071454.14_0	chr12	+	2800	20	FSM	ENSMUSG00000071454.14	ENSMUST00000173199.8	2820	20	20	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATGTGATCGCCAAGTC	NA	NA	NA	NA	NA	NA	NA	NA	3622400	3831796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ENSMUSG00000071454.14_4	chr12	+	2349	21	FSM	ENSMUSG00000071454.14	ENSMUST00000174663.8	2381	21	17	15	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAGAAAAAGCCCTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	3622486	3831380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3622648_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3804095_3804117_3822586_3822747_3823550_3823641_3826058_3826110_3829618_3829655_3831105
ENSMUSG00000071454.14_7	chr12	+	2325	19	FSM	ENSMUSG00000071454.14	ENSMUST00000077930.13	2376	19	32	19	32	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGGAAAAGAACAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	3623015	3831372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3623233_3639170_3639239_3641905_3641987_3646648_3646863_3667605_3667692_3682809_3682965_3693916_3694023_3698222_3698390_3736737_3736863_3768411_3768490_3782617_3782708_3784938_3785027_3798424_3798511_3799469_3799584_3801810_3801908_3822586_3822747_3823550_3823641_3829618_3829655_3831105
ENSMUSG00000071456.7_0	chr12	-	3557	3	FSM	ENSMUSG00000071456.7	ENSMUST00000168012.3	3569	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAAATTGGGCCTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	3477007	3453885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_3456712_3457700_3457925_3476500
ENSMUSG00000071470.5_0	chr14	-	1474	4	FSM	ENSMUSG00000071470.5	ENSMUST00000095932.5	1509	4	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCTTTTCTTTTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	51033150	51026704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51027470_51029429_51029764_51031014_51031332_51033092
ENSMUSG00000071477.11_0	chr6	-	3095	6	FSM	ENSMUSG00000071477.11	ENSMUST00000114583.8	3111	6	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGTTCTTGTTTGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	48025032	48001121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48024919
ENSMUSG00000071477.11_1	chr6	-	3168	6	FSM	ENSMUSG00000071477.11	ENSMUST00000095944.10	3184	6	5	11	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTAAAAGACGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	48025840	48001149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_48002753_48006056_48006309_48014488_48014603_48018962_48019090_48020777_48021636_48025626
ENSMUSG00000071478.7_0	chr13	+	313	1	FSM	ENSMUSG00000071478.7	ENSMUST00000090776.7	572	1	164	95	164	-95	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTGGTCTTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	23758718	23759031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23758700_23759000
ENSMUSG00000071497.5_0	chr19	-	871	1	FSM	ENSMUSG00000071497.5	ENSMUST00000095978.5	901	1	8	22	8	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	1315	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AACAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53577491	53576620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53576600_53577500
ENSMUSG00000071516.3_0	chr13	+	382	1	FSM	ENSMUSG00000071516.3	ENSMUST00000070124.5	393	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTGAAACCAAACATTACG	NA	NA	NA	NA	NA	NA	NA	NA	21900596	21900978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21900600_21901000
ENSMUSG00000071528.5_0	chr19	-	353	4	FSM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGAAAAGCTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47079080	47071913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47072009_47074393_47074487_47074572_47074669_47079011
ENSMUSG00000071528.5_1	chr19	-	279	3	ISM	ENSMUSG00000071528.5	ENSMUST00000096014.5	362	4	4419	7	4401	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGGAAAAGCTGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	47074663	47071913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_47072009_47074393_47074487_47074572
ENSMUSG00000071532.7_0	chr10	+	506	1	FSM	ENSMUSG00000071532.7	ENSMUST00000096020.7	468	1	5	-43	5	43	mono-exon	FALSE	NA	NA	NA	NA	NA	447	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCATAAAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14398826	14399332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_14398800_14399300
ENSMUSG00000071533.12_1	chr16	-	2277	5	FSM	ENSMUSG00000071533.12	ENSMUST00000114444.9	2295	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGGTGGTGGTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	55850092	55835876	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55837681_55838834_55838891_55842417_55842493_55844586_55844802_55849965
ENSMUSG00000071533.12_8	chr16	-	126	2	FSM	ENSMUSG00000071533.12	ENST00000627393.1	135	2	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTCTAGCAAGCAGTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55850041	55844950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55845001_55849965
ENSMUSG00000071537.7_0	chr6	-	2255	5	FSM	ENSMUSG00000071537.7	ENSMUST00000096030.7	2276	5	14	7	14	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGTAAGAGCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	38614154	38603601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_38604661_38605019_38605124_38606698_38606845_38607215_38607318_38613310
ENSMUSG00000071547.5_0	chr14	+	1834	14	FSM	ENSMUSG00000071547.5	ENSMUST00000227096.2	1848	14	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30853020	30861078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30853334_30856695_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071547.5_10	chr14	+	1828	13	FSM	ENSMUSG00000071547.5	ENSMUST00000227794.2	1858	13	27	3	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCTCTGCTTCATTCCA	NA	NA	NA	NA	NA	NA	NA	NA	30856388	30861078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30856881_30856986_30857062_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071547.5_4	chr14	+	1601	13	FSM	ENSMUSG00000071547.5	ENST00000459839.5	1614	13	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCACTTTTATTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	30853098	30860998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30853334_30856695_30856881_30857294_30857351_30857450_30857545_30857642_30857772_30857874_30857936_30858021_30858125_30858224_30858327_30858552_30858635_30860080_30860168_30860288_30860430_30860565_30860631_30860737
ENSMUSG00000071552.6_0	chr16	-	910	4	FSM	ENSMUSG00000071552.6	ENSMUST00000096065.6	919	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCTGTAAGTATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	43484500	43469229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_43469598_43479801_43479900_43482338_43482669_43484386
ENSMUSG00000071573.15_0	chr19	-	1349	5	FSM	ENSMUSG00000071573.15	ENSMUST00000163093.2	1378	5	23	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACCAAATGTCGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	33369672	33115152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_33115675_33145721_33145898_33179874_33180049_33359766_33359926_33369354
ENSMUSG00000071632.11_0	chr16	+	1275	3	FSM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTATACCTGTCTCAATT	NA	NA	NA	NA	NA	NA	NA	NA	18655327	18658904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18655370_18655455_18655624_18657839
ENSMUSG00000071632.11_1	chr16	+	1221	2	ISM	ENSMUSG00000071632.11	ENSMUST00000055413.13	1281	3	138	8	135	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTTATACCTGTCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	18655465	18658902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_18655624_18657839
ENSMUSG00000071637.6_0	chr16	+	3735	1	FSM	ENSMUSG00000071637.6	ENSMUST00000096232.6	3746	1	6	5	6	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	231	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGTTCAATAGCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	15705155	15708890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_15705200_15708900
ENSMUSG00000071644.11_0	chr19	+	1853	10	FSM	ENSMUSG00000071644.11	ENSMUST00000052248.8	1864	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	10114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGTGTTTTCTGTCATAG	NA	NA	NA	NA	NA	NA	NA	NA	8944414	8955842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8944590_8945579_8945739_8946525_8946590_8946727_8946871_8947207_8947352_8949870_8950001_8950267_8950473_8954681_8954855_8954948_8955074_8955307
ENSMUSG00000071645.7_0	chr19	+	2738	9	FSM	ENSMUSG00000071645.7	ENSMUST00000096239.7	2753	9	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGACATTTAATGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	8931216	8943565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8931386_8932750_8932942_8936450_8936767_8937106_8937208_8939707_8940187_8941383_8941494_8941627_8941739_8941924_8942018_8942397
ENSMUSG00000071646.10_0	chr19	+	3128	18	FSM	ENSMUSG00000071646.10	ENSMUST00000096240.3	3135	18	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCAGCTATTCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	8919245	8929667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8919747_8920828_8920897_8921376_8921471_8923119_8923238_8923369_8923434_8923630_8923749_8924011_8924115_8924400_8924501_8924615_8924805_8924888_8924964_8925090_8925150_8925388_8925487_8925620_8925761_8926314_8926544_8927663_8927754_8928275_8928395_8928499_8928649_8928853
ENSMUSG00000071647.6_0	chr19	+	3293	22	FSM	ENSMUSG00000071647.6	ENSMUST00000096241.6	3322	22	10	19	10	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	8906925	8918927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8907317_8908162_8908335_8908407_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ENSMUSG00000071647.6_4	chr19	+	2959	22	FSM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAGAAAAAAGTAAC	NA	NA	NA	NA	NA	NA	NA	NA	8907256	8918927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8907317_8908162_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ENSMUSG00000071647.6_6	chr19	+	2885	21	ISM	ENSMUSG00000071647.6	ENSMUST00000224272.2	2978	22	919	20	919	-20	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAAAAAGAAAAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	8908175	8918926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8908335_8908410_8908669_8908753_8908868_8910605_8910674_8910786_8910911_8911133_8911305_8911450_8911521_8911605_8911717_8912314_8912411_8913667_8913824_8913982_8914125_8914492_8914645_8914725_8914852_8914926_8915059_8915825_8915894_8916391_8916481_8916551_8916650_8916780_8916869_8917942_8918042_8918266_8918398_8918493
ENSMUSG00000071648.5_0	chr19	-	1506	3	FSM	ENSMUSG00000071648.5	ENSMUST00000096242.5	1517	3	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAATCACTGTTCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	8906716	8904761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8905252_8905341_8905589_8905947
ENSMUSG00000071649.7_0	chr19	+	1582	5	FSM	ENSMUSG00000071649.7	ENSMUST00000096243.7	1603	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCGGAGGGGCTTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	8897750	8904592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8898013_8899169_8899345_8902901_8903263_8903445_8903737_8904099
ENSMUSG00000071650.7_0	chr19	+	3727	23	FSM	ENSMUSG00000071650.7	ENST00000540933.5	3754	23	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGGAGAAACAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	8875378	8893992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8875524_8879627_8879733_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_14	chr19	+	3770	24	ISM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	4174	20	4168	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	8879638	8894016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_15	chr19	+	3707	23	ISM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	4165	20	4165	5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	8879635	8894016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_4	chr19	+	3840	25	FSM	ENSMUSG00000071650.7	ENSMUST00000096246.5	3860	25	0	20	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	8875464	8894016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8885214_8885281_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071650.7_7	chr19	+	3768	24	FSM	ENSMUSG00000071650.7	ENSMUST00000235274.2	3788	24	0	20	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACAAAACATAAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	8875470	8894016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8875524_8879627_8879733_8879885_8879995_8882298_8882427_8884578_8884759_8886041_8886112_8886284_8886373_8886454_8886552_8886796_8886978_8887829_8887984_8888071_8888308_8888398_8888526_8888640_8888721_8888959_8889104_8889227_8889325_8889837_8889940_8890074_8890319_8891664_8891730_8891905_8891983_8892065_8892141_8892288_8892403_8892521_8892635_8892767_8892869_8892988
ENSMUSG00000071652.9_0	chr19	+	3257	2	FSM	ENSMUSG00000071652.9	ENSMUST00000096249.7	3274	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAACAGTCCAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	8870378	8875245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8870513_8872122
ENSMUSG00000071653.10_0	chr19	+	797	4	FSM	ENSMUSG00000071653.10	ENSMUST00000096251.10	806	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	576	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAACATTTGCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	8866225	8868245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8866329_8866487_8866613_8867366_8867465_8867774
ENSMUSG00000071654.7_0	chr19	-	798	2	FSM	ENSMUSG00000071654.7	ENSMUST00000096253.7	821	2	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCGAACACTTTGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	8858271	8857384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8857981_8858069
ENSMUSG00000071655.13_0	chr19	+	1032	10	FSM	ENSMUSG00000071655.13	ENSMUST00000166407.9	1033	10	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTATATGCCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	8848922	8853019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8848950_8849034_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071655.13_1	chr19	+	1255	9	FSM	ENSMUSG00000071655.13	ENSMUST00000238036.2	1291	9	18	18	18	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATCTTAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	8848974	8853209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8849121_8849222_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071655.13_6	chr19	+	1092	8	FSM	ENSMUSG00000071655.13	ENSMUST00000096255.7	1127	8	34	1	34	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCCTGGCTCCTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	8849057	8853027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8849277_8849371_8849479_8849581_8849652_8850877_8851070_8851158_8851211_8851502_8851620_8852523_8852717_8852885
ENSMUSG00000071656.8_0	chr19	+	2564	2	FSM	ENSMUSG00000071656.8	ENSMUST00000096257.3	2583	2	15	4	15	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGTAATATACAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	8828163	8831269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8828477_8829018
ENSMUSG00000071657.13_0	chr19	+	1384	11	FSM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	8817886	8826030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8817933_8818471_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUSG00000071657.13_1	chr19	+	1336	10	ISM	ENSMUSG00000071657.13	ENSMUST00000086058.13	1388	11	591	0	591	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTTGTGTGGACATCC	NA	NA	NA	NA	NA	NA	NA	NA	8818473	8826030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8818789_8820372_8820455_8822534_8822679_8823553_8823689_8823829_8823928_8824769_8824912_8825030_8825098_8825277_8825347_8825444_8825526_8825827
ENSMUSG00000071659.5_0	chr19	+	5089	14	FSM	ENSMUSG00000071659.5	ENSMUST00000096753.5	5118	14	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGAATTTTCCTATCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	8797396	8811501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8798178_8800167_8800304_8800593_8800671_8800893_8801034_8801584_8801676_8801769_8801883_8802223_8802488_8802634_8802758_8803335_8803465_8804007_8804177_8807113_8807315_8808251_8808326_8808588_8808697_8808818
ENSMUSG00000071660.11_0	chr19	-	3491	4	FSM	ENSMUSG00000071660.11	ENSMUST00000096751.11	3509	4	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTCACAAATGCATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	8796685	8786444	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8789203_8793217_8793401_8795799_8796049_8796384
ENSMUSG00000071660.11_4	chr19	-	1574	3	FSM	ENSMUSG00000071660.11	ENSMUST00000088092.6	1585	3	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTAGCTGGGTGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	8796652	8788664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8789203_8793217_8793401_8795799
ENSMUSG00000071661.8_0	chr19	+	1953	2	FSM	ENSMUSG00000071661.8	ENSMUST00000172175.3	2004	2	41	10	41	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAATTATCCCTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	8779959	8782200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8780050_8780337
ENSMUSG00000071662.5_0	chr19	-	878	8	FSM	ENSMUSG00000071662.5	ENSMUST00000096261.5	890	8	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTATTTTTGGTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	8775935	8770496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587_8775698_8775822
ENSMUSG00000071662.5_1	chr19	-	821	7	FSM	ENSMUSG00000071662.5	ENSMUST00000235964.2	833	7	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTCATGGAAATGTTG	NA	NA	NA	NA	NA	NA	NA	NA	8775805	8770548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8770769_8770989_8771024_8771499_8771572_8771665_8771732_8771843_8771895_8774599_8774760_8775587
ENSMUSG00000071669.15_0	chr16	+	2086	11	FSM	ENSMUSG00000071669.15	ENSMUST00000122168.8	2096	11	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGTTTTAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11224521	11479410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_11224761_11231089_11231221_11236686_11236763_11238564_11238648_11263028_11263093_11265243_11265373_11328823_11328907_11389562_11389670_11449321_11449439_11473999_11474056_11478409
ENSMUSG00000071691.12_7	chr19	-	906	6	FSM	ENSMUSG00000071691.12	ENST00000527634.5	915	6	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTACCGCAGCGAGAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4702299	4675993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4676270_4687241_4687345_4692140_4692252_4695627_4695750_4699700_4699848_4702152
ENSMUSG00000071708.12_0	chrX	-	3698	11	FSM	ENSMUSG00000071708.12	ENSMUST00000112529.8	3717	11	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATTTCATCCCGTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	156275271	156226857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_156229173_156230350_156230467_156237829_156237910_156238989_156239105_156243322_156243413_156244171_156244327_156244956_156245133_156248819_156248885_156249393_156249488_156252983_156253105_156274900
ENSMUSG00000071711.13_0	chr15	+	1267	3	FSM	ENSMUSG00000071711.13	ENSMUST00000167140.8	1279	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACATCAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78290911	78298190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78290945_78294242_78294865_78297578
ENSMUSG00000071711.13_1	chr15	+	1226	2	FSM	ENSMUSG00000071711.13	ENSMUST00000229739.2	1311	2	69	16	-16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAACATCAAGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	78294250	78298190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78294865_78297578
ENSMUSG00000071711.13_2	chr15	+	1026	2	FSM	ENSMUSG00000071711.13	ENST00000404393.5	1036	2	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATCTGACCATCACAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	78294275	78297907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78294944_78297549
ENSMUSG00000071713.7_0	chr15	+	4873	15	FSM	ENSMUSG00000071713.7	ENSMUST00000230264.3	4900	15	13	14	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAAACAAGGCAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78209964	78235187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78210110_78210212_78210299_78219257_78219495_78220547_78220672_78223001_78223190_78224643_78224802_78224879_78225049_78225537_78225674_78225793_78225955_78228684_78228825_78229598_78229759_78230582_78230674_78230876_78230935_78231573_78231678_78232271
ENSMUSG00000071724.6_0	chr15	+	1892	7	FSM	ENSMUSG00000071724.6	ENSMUST00000163991.4	1909	7	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCACACAAGGCTCCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	76178559	76181091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76179492_76179589_76179663_76179883_76180025_76180094_76180185_76180277_76180342_76180425_76180562_76180635
ENSMUSG00000071753.14_0	chrX	+	1528	3	FSM	ENSMUSG00000071753.14	ENST00000660897.1	1534	3	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCCCCCCCCCCGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	60159961	60163399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_60160031_60161819_60162454_60162574
ENSMUSG00000071753.14_1	chrX	+	1456	2	ISM	ENSMUSG00000071753.14	ENST00000660897.1	1534	3	1863	4	1819	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCCCCCCCCCCGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	60161822	60163399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_60162454_60162574
ENSMUSG00000071757.11_0	chr15	+	4364	4	FSM	ENSMUSG00000071757.11	ENSMUST00000096430.11	4376	4	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTTCCCTCTGCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	57558065	57703221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_57558401_57626041_57626116_57684427_57687148_57701986
ENSMUSG00000071793.13_0	chr8	+	4001	6	FSM	ENSMUSG00000071793.13	ENSMUST00000140111.8	4009	6	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAACAGTGTGGTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	20016473	20055498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_20016689_20030550_20030924_20035860_20036160_20039783_20039904_20041811_20042185_20052877
ENSMUSG00000071796.14_0	chr8	+	4642	5	FSM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20143853	20172983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_20143957_20157802_20158000_20163109_20163409_20167037_20167158_20169060
ENSMUSG00000071796.14_1	chr8	+	4544	4	ISM	ENSMUSG00000071796.14	ENSMUST00000153748.2	4659	5	13950	11	-216	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAAAAAGTAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20157797	20172983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_20158000_20163109_20163409_20167037_20167158_20169060
ENSMUSG00000071847.14_0	chr18	+	10853	5	FSM	ENSMUSG00000071847.14	ENSMUST00000236135.2	10879	5	20	6	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGCATTGCAGAAGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	63055321	63094244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_63055793_63066945_63067130_63069976_63070509_63082945_63083268_63084900
ENSMUSG00000071856.11_0	chr18	-	7834	19	FSM	ENSMUSG00000071856.11	ENSMUST00000089874.9	7858	19	17	7	17	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCCATTCTGTATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	44945232	44558133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_44563135_44564402_44564526_44575978_44576077_44578796_44579004_44582271_44582507_44592865_44593050_44596904_44597009_44601447_44601589_44606690_44606840_44608200_44608291_44609298_44609446_44624190_44624398_44626448_44626613_44643163_44643307_44652583_44652727_44667253_44667368_44857531_44857744_44892242_44892488_44945105
ENSMUSG00000071862.4_0	chr18	-	1177	2	FSM	ENSMUSG00000071862.4	ENST00000521094.2	1188	2	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1347	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGCTTGGCTTAATAA	NA	NA	NA	NA	NA	NA	NA	NA	35348031	35345191	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35345983_35347645
ENSMUSG00000071866.13_0	chr11	+	1153	5	FSM	ENSMUSG00000071866.13	ENSMUST00000132846.2	1170	5	10	7	10	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	48923	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTTTGTCCTTGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	6365452	6369810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_6365980_6368100_6368132_6368225_6368315_6369112_6369286_6369477
ENSMUSG00000071984.12_0	chr17	-	6329	23	FSM	ENSMUSG00000071984.12	ENSMUST00000239425.2	6333	23	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAATGTGTGCAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	8046131	7957401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_7958163_7959499_7959623_7960453_7960616_7961724_7961755_7965396_7965477_7969175_7969285_7972351_7972583_7975089_7975234_7977293_7977363_7983789_7984240_7985219_7985332_7988487_7988589_7990222_7992638_7994209_7994399_7997478_7997587_7998875_7999064_8001202_8001321_8003177_8003277_8007825_8008033_8019726_8019796_8020399_8020487_8023658_8023854_8045849
ENSMUSG00000072066.8_0	chr13	-	1419	4	FSM	ENSMUSG00000072066.8	ENSMUST00000223338.2	1457	4	26	12	26	-12	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGAGAGAAACCCTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	62771968	62752080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62753195_62754939_62755001_62755186_62755314_62771851
ENSMUSG00000072082.8_0	chr17	-	4123	17	FSM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTCTATCCCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	24470373	24441171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224_24468380_24470268
ENSMUSG00000072082.8_3	chr17	-	4019	16	ISM	ENSMUSG00000072082.8	ENSMUST00000115390.5	4133	17	2003	0	2003	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTTCTATCCCAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	24468380	24441171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_24443321_24443881_24444052_24445448_24445577_24445657_24445758_24449289_24449378_24450284_24450466_24450758_24450883_24453343_24453509_24456054_24456207_24458820_24458899_24459752_24459858_24460361_24460416_24461113_24461308_24462252_24462321_24463453_24463561_24468224
ENSMUSG00000072115.12_0	chr14	+	1081	2	FSM	ENSMUSG00000072115.12	ENSMUST00000069011.9	1094	2	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCATTAAGAGTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	51333461	51339454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51333931_51338842
ENSMUSG00000072214.8_0	chr16	-	3651	11	FSM	ENSMUSG00000072214.8	ENSMUST00000232653.2	3678	11	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCCTGCCAGACTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	18445199	18439256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18444837
ENSMUSG00000072214.8_1	chr16	-	2126	12	FSM	ENSMUSG00000072214.8	ENSMUST00000096987.7	2143	12	11	6	-4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCGCACCGAGTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	18448693	18440566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18448400_18448412_18448557
ENSMUSG00000072214.8_2	chr16	-	2108	11	NIC	ENSMUSG00000072214.8	novel	2143	12	NA	NA	3	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGTCGCACCGAGTGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	18448686	18440566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr16_-_18441547_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18448557
ENSMUSG00000072235.7_0	chr15	-	1689	4	FSM	ENSMUSG00000072235.7	ENST00000679733.1	1701	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTGCCAGCTTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	98851423	98847695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98848896_98849068_98849218_98849324_98849573_98851331
ENSMUSG00000072235.7_11	chr15	-	1789	4	FSM	ENSMUSG00000072235.7	ENSMUST00000097014.7	1803	4	10	4	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	35574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTTGTCTTGTGTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	98851574	98847721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98848896_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000072258.12_0	chr1	+	2377	11	FSM	ENSMUSG00000072258.12	ENSMUST00000192076.3	2384	11	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATTTTTAGTAGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	183170327	183191016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_183170499_183172260_183172385_183177247_183177418_183179117_183179232_183181756_183181956_183183773_183183905_183185480_183185640_183187077_183187145_183187725_183187850_183189427_183189583_183190053
ENSMUSG00000072437.5_0	chr19	+	3917	1	FSM	ENSMUSG00000072437.5	ENSMUST00000088237.6	3928	1	4	7	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTATCAGAAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	60744428	60748345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_60744400_60748300
ENSMUSG00000072501.6_3	chr15	+	6652	21	FSM	ENSMUSG00000072501.6	ENSMUST00000048188.10	6665	21	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGCTTTGTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	66449440	66517103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ENSMUSG00000072501.6_42	chr15	+	2262	8	FSM	ENSMUSG00000072501.6	ENST00000337920.8	2281	8	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCATTACAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	66449487	66482625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66449697_66451921_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374
ENSMUSG00000072501.6_57	chr15	+	2204	9	FSM	ENSMUSG00000072501.6	ENST00000395376.5	2212	9	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTCATTACAATGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	66449642	66482625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469513_66469604_66475875_66476090_66476625_66476755_66481374
ENSMUSG00000072501.6_62	chr15	+	5085	19	FSM	ENSMUSG00000072501.6	ENST00000395390.6	5108	19	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGAAGAACTCTGCGTT	NA	NA	NA	NA	NA	NA	NA	NA	66451930	66515883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476625_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ENSMUSG00000072501.6_7	chr15	+	9364	21	FSM	ENSMUSG00000072501.6	ENSMUST00000229160.2	9383	21	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGACTTTTTCATTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	66449442	66519820	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66469525_66469604_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ENSMUSG00000072501.6_8	chr15	+	6574	20	FSM	ENSMUSG00000072501.6	ENSMUST00000230948.2	6584	20	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCAGCTTTGTTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	66449437	66517103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_66449697_66451917_66452038_66466655_66466828_66466963_66467049_66469207_66469297_66475875_66476090_66476628_66476755_66481374_66481458_66484869_66485120_66487068_66487258_66487486_66487697_66494609_66494667_66495840_66495949_66500773_66500939_66501648_66501831_66502715_66502816_66504554_66504751_66508532_66508882_66511761_66511925_66513646
ENSMUSG00000072568.5_0	chr15	-	5532	2	FSM	ENSMUSG00000072568.5	ENSMUST00000100635.5	5565	2	26	7	26	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATACAAGGTTTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	60696903	60690849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_60695841_60696362
ENSMUSG00000072571.4_0	chr14	+	1215	7	FSM	ENSMUSG00000072571.4	ENST00000556585.2	1218	7	3	0	3	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	1462	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGCGCTGTGCATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	52254324	52257232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_52254403_52254512_52254655_52255207_52255319_52255410_52255468_52255998_52256116_52256195_52256336_52256662
ENSMUSG00000072573.3_0	chr5	+	1136	2	FSM	ENSMUSG00000072573.3	ENSMUST00000100641.3	1148	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTAGCAGAGTTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	134705349	134708993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134705654_134708161
ENSMUSG00000072582.10_0	chr11	+	3013	2	FSM	ENSMUSG00000072582.10	ENSMUST00000108022.8	3038	2	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	493	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACAAAATCCACGTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	86574824	86583272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86574950_86580384
ENSMUSG00000072623.7_0	chr6	-	3962	6	FSM	ENSMUSG00000072623.7	ENSMUST00000161170.2	3968	6	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGATGTTCATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	118456275	118438910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118442362_118442795_118442860_118443788_118443882_118444199_118444327_118454267_118454386_118456166
ENSMUSG00000072623.7_2	chr6	-	1333	3	FSM	ENSMUSG00000072623.7	ENST00000302609.8	1351	3	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGTAGCGCAAGTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	118444319	118441304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_118442428_118443791_118443882_118444199
ENSMUSG00000072640.12_0	chr11	+	8028	4	FSM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAGTACAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	78717409	78737689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_78717463_78726843_78726985_78728915_78729009_78729948
ENSMUSG00000072640.12_1	chr11	+	7971	3	ISM	ENSMUSG00000072640.12	ENSMUST00000147875.9	8035	4	9438	7	9438	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAGTACAGCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	78726847	78737689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_78726985_78728915_78729009_78729948
ENSMUSG00000072647.7_0	chr5	-	3473	1	FSM	ENSMUSG00000072647.7	ENSMUST00000100757.6	3496	1	16	7	16	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTCAGACGAGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	121660118	121656645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_121656600_121660100
ENSMUSG00000072653.15_0	chr6	+	1141	5	FSM	ENSMUSG00000072653.15	ENST00000434415.6	1145	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTAAACAATCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47920262	47928992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_47920312_47922310_47922686_47922770_47922897_47923595_47923686_47928491
ENSMUSG00000072653.15_6	chr6	+	1083	4	ISM	ENSMUSG00000072653.15	ENST00000434415.6	1145	5	2057	4	-43	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTAAACAATCCTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	47922319	47928992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_47922686_47922770_47922897_47923595_47923686_47928491
ENSMUSG00000072660.6_0	chr6	-	1556	5	FSM	ENSMUSG00000072660.6	ENSMUST00000100778.5	1590	5	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGCTAAGTTCAAGACC	NA	NA	NA	NA	NA	NA	NA	NA	147377286	147339866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_147340222_147344290_147344406_147357305_147357581_147373691_147373830_147376613
ENSMUSG00000072676.13_0	chr14	-	2140	4	FSM	ENSMUSG00000072676.13	ENSMUST00000185006.9	2147	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATAAGTTGCCTCGATCA	NA	NA	NA	NA	NA	NA	NA	NA	25928089	25923723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_25925332_25925945_25926006_25926221_25926326_25927721
ENSMUSG00000072688.3_0	chr5	-	707	1	FSM	ENSMUSG00000072688.3	ENSMUST00000202768.2	748	1	27	14	27	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGGAAATTGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117457282	117456575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_117456600_117457300
ENSMUSG00000072692.8_0	chr5	-	669	2	FSM	ENSMUSG00000072692.8	ENSMUST00000100847.5	682	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGGTTGGTCTTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	115248319	115240986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115241588_115248251
ENSMUSG00000072692.8_1	chr5	-	289	1	FSM	ENSMUSG00000072692.8	ENSMUST00000124641.2	294	1	3	2	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATTTCAATCAGTCATA	NA	NA	NA	NA	NA	NA	NA	NA	115241577	115241288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115241300_115241600
ENSMUSG00000072694.9_0	chr5	-	1321	2	FSM	ENSMUSG00000072694.9	ENSMUST00000112160.4	1333	2	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGAGATCCTGTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	114952033	114946264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114947393_114951840
ENSMUSG00000072694.9_1	chr5	-	413	2	FSM	ENSMUSG00000072694.9	ENSMUST00000100850.6	420	2	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTGGTTATCTATGCTC	NA	NA	NA	NA	NA	NA	NA	NA	114961500	114960500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114960787_114961373
ENSMUSG00000072704.7_0	chr6	+	2817	1	FSM	ENSMUSG00000072704.7	ENSMUST00000100864.7	2842	1	13	12	13	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	929	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGAAATAATGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	133081884	133084701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_133081900_133084700
ENSMUSG00000072707.4_0	chr14	-	4094	3	FSM	ENSMUSG00000072707.4	ENSMUST00000217035.2	4126	3	31	1	31	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATTTTTTATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	8146836	8137972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8141729_8142831_8143009_8146675
ENSMUSG00000072707.4_1	chr14	-	4005	2	FSM	ENSMUSG00000072707.4	ENSMUST00000206009.3	4017	2	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGAATTTTTTATCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	8146924	8137972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8141729_8146675
ENSMUSG00000072723.13_0	chr14	+	1280	8	FSM	ENSMUSG00000072723.13	ENSMUST00000081331.12	1296	8	8	8	8	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTGTGGTAAGTCAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	14678129	14724973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_14678366_14679640_14679756_14681118_14681293_14692960_14693263_14698470_14698633_14703524_14703559_14704918_14704992_14724789
ENSMUSG00000072762.10_0	chr5	-	1973	3	ISM	ENSMUSG00000072762.10	ENSMUST00000112547.8	2001	4	12285	12	12285	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTATTAATGTATACA	NA	NA	NA	NA	NA	NA	NA	NA	109887178	109883867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_109885666_109886815_109886877_109887064
ENSMUSG00000072763.3_0	chr5	-	3325	4	FSM	ENSMUSG00000072763.3	ENSMUST00000092720.4	3341	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAGTTGCCATGGTCATG	NA	NA	NA	NA	NA	NA	NA	NA	109838896	109822415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_109825258_109826379_109826441_109826628_109826756_109838601
ENSMUSG00000072770.10_0	chr6	+	1495	5	FSM	ENSMUSG00000072770.10	ENSMUST00000112414.8	1498	5	2	1	2	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTGTTGTCGTTGTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	125026653	125031156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125027016_125027396_125027613_125027809_125027905_125028205_125028324_125030452
ENSMUSG00000072772.4_0	chr6	-	847	3	FSM	ENSMUSG00000072772.4	ENSMUST00000004389.6	863	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAACCTTTGTGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	124718327	124716151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124716377_124717481_124717659_124717882
ENSMUSG00000072774.11_0	chr5	-	2887	5	FSM	ENSMUSG00000072774.11	ENSMUST00000186219.7	2904	5	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTTATATGAGGAATTG	NA	NA	NA	NA	NA	NA	NA	NA	105007925	104961040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_104963302_104964564_104964626_104964862_104964990_104965173_104965219_105007532
ENSMUSG00000072778.4_0	chr6	-	3574	6	FSM	ENSMUSG00000072778.4	ENSMUST00000100968.4	3585	6	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGGTGGAACAACAATATG	NA	NA	NA	NA	NA	NA	NA	NA	124208810	124167621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124169460_124174179_124174304_124177457_124177683_124200635_124201443_124207126_124207425_124208528
ENSMUSG00000072780.4_0	chr6	+	11264	6	FSM	ENSMUSG00000072780.4	ENSMUST00000075095.7	11289	6	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTGTATTATTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	123755856	123801865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_123756148_123757351_123757650_123763640_123764448_123781118_123781344_123783349_123783474_123792346
ENSMUSG00000072809.3_0	chr11	-	2719	1	FSM	ENSMUSG00000072809.3	ENSMUST00000101007.3	2766	1	38	9	38	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATGACCACAGCAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	68951271	68948552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_68948600_68951300
ENSMUSG00000072825.12_1	chr12	+	6517	19	FSM	ENSMUSG00000072825.12	ENSMUST00000101018.11	6641	19	111	13	91	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACCAGTGACTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	112688718	112713013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUSG00000072825.12_12	chr12	+	6558	20	FSM	ENSMUSG00000072825.12	ENSMUST00000222711.2	6566	20	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACACCAGTGACTGCCGC	NA	NA	NA	NA	NA	NA	NA	NA	112688627	112713013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_112688670_112688719_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUSG00000072825.12_36	chr12	+	3763	16	NIC	ENSMUSG00000072825.12	novel	6566	20	NA	NA	100	-5	combination_of_known_junctions	FALSE	non_canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCAGTGACTGCCGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	112688727	112713016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_+_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112701983_112705765_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUSG00000072825.12_8	chr12	+	6556	20	NNC	ENSMUSG00000072825.12	novel	6566	20	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCAGTGACTGCCGCCT	NA	NA	NA	NA	NA	NA	NA	NA	112688627	112713015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_112688666_112688719_112688817_112691057_112691190_112697784_112697875_112698438_112698518_112698933_112698993_112699825_112699965_112701594_112701700_112701785_112702260_112702589_112703303_112703591_112703766_112704007_112704099_112704272_112705944_112707207_112707446_112709386_112709547_112709836_112709981_112710103_112710193_112710503_112710598_112710956_112711009_112711098
ENSMUSG00000072845.4_0	chr5	-	1111	6	FSM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAACACATGATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	86579750	86559500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372_86576578_86579701
ENSMUSG00000072845.4_1	chr5	-	1061	5	ISM	ENSMUSG00000072845.4	ENST00000508048.6	1142	6	3196	9	3196	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACACATGATTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	86576574	86559498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372
ENSMUSG00000072845.4_2	chr5	-	1138	7	FSM	ENSMUSG00000072845.4	ENST00000334830.11	1145	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACATGATTTATTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	86580447	86559496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_86559783_86562335_86562479_86567860_86568121_86570352_86570525_86576372_86576578_86579701_86579751_86580424
ENSMUSG00000072872.4_0	chr6	-	4474	5	FSM	ENSMUSG00000072872.4	ENSMUST00000101118.4	4503	5	13	16	13	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAGTAAAATTTACATT	NA	NA	NA	NA	NA	NA	NA	NA	100264433	100205541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_100209387_100209827_100209927_100210023_100210201_100263443_100263570_100264206
ENSMUSG00000072889.10_0	chr5	-	3682	23	FSM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAAATTTGTGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72717005	72670651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356_72716612_72716931
ENSMUSG00000072889.10_2	chr5	-	3609	22	ISM	ENSMUSG00000072889.10	ENSMUST00000087216.12	3712	23	415	8	415	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCAAATTTGTGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72716612	72670651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_72671675_72673554_72673609_72674368_72674456_72675537_72675643_72679490_72679561_72680851_72681019_72681429_72681571_72681989_72682012_72685501_72685594_72686354_72686515_72686726_72686848_72690387_72690479_72694708_72694832_72695492_72695618_72696948_72697064_72697636_72697738_72697834_72697997_72698196_72698376_72707634_72707766_72709985_72710096_72713514_72713689_72716356
ENSMUSG00000072905.6_0	chr12	+	1764	2	FSM	ENSMUSG00000072905.6	ENSMUST00000110147.3	1766	2	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATAAACATTTTTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	87840841	87844627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87841033_87843054
ENSMUSG00000072915.4_0	chr11	+	4093	5	FSM	ENSMUSG00000072915.4	ENSMUST00000139337.3	4100	5	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGACATCTCCGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	58737984	58752776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58738086_58739471_58739529_58745085_58745213_58746886_58746980_58749061
ENSMUSG00000072934.11_0	chrX	+	3555	4	FSM	ENSMUSG00000072934.11	ENSMUST00000155206.8	3585	4	16	14	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAGCCAAAGAACTT	NA	NA	NA	NA	NA	NA	NA	NA	143239592	143260048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_143239646_143253678_143253755_143254056_143254140_143256705
ENSMUSG00000072934.11_1	chrX	+	3493	3	FSM	ENSMUSG00000072934.11	ENSMUST00000178233.2	3515	3	1	21	1	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAATTTGATTTAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	143253677	143260038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_143253755_143254056_143254140_143256705
ENSMUSG00000072940.6_0	chr6	+	280	1	FSM	ENSMUSG00000072940.6	ENSMUST00000119024.2	210	1	1	-71	1	71	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATTAAAAAAAAATCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	86311013	86311293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86311000_86311300
ENSMUSG00000072941.6_1	chr5	+	3713	2	FSM	ENSMUSG00000072941.6	ENSMUST00000101208.6	3738	2	10	15	10	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	2732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACAAAAAAATACTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	52521142	52528745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52521395_52525284
ENSMUSG00000072946.13_0	chr12	+	3151	10	FSM	ENSMUSG00000072946.13	ENSMUST00000123614.8	3168	10	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGACTTATGACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	84332015	84362599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072946.13_7	chr12	+	1855	9	FSM	ENSMUSG00000072946.13	ENSMUST00000147363.8	1869	9	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATTTTTTTCTTGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84332155	84356721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84332251_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84355948
ENSMUSG00000072946.13_9	chr12	+	2047	10	FSM	ENSMUSG00000072946.13	ENSMUST00000146377.8	2073	10	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGAATTCTAAGGTGAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84332198	84361621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84332308_84339057_84339143_84341990_84342110_84344784_84344977_84349010_84349182_84352699_84352910_84354549_84354672_84355118_84355207_84357692_84357733_84360710
ENSMUSG00000072949.7_0	chr12	+	2259	3	FSM	ENSMUSG00000072949.7	ENSMUST00000168120.3	2272	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACCTTCAGAAGTGAAGT	NA	NA	NA	NA	NA	NA	NA	NA	84056269	84065138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84056741_84061152_84061356_84063553
ENSMUSG00000072955.15_0	chrX	-	731	4	FSM	ENSMUSG00000072955.15	ENSMUST00000127404.8	816	4	78	7	78	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTCTTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	135877540	135855743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135856232_135857483_135857589_135876146_135876252_135877507
ENSMUSG00000072964.15_1	chrX	+	2799	5	FSM	ENSMUSG00000072964.15	ENSMUST00000180025.8	2812	5	9	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACATTGTGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134786608	134791823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134786837_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUSG00000072964.15_5	chrX	+	2814	5	FSM	ENSMUSG00000072964.15	ENSMUST00000068755.14	2823	5	2	7	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACATTGTGTGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	134786603	134791823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134786847_134787593_134787676_134788009_134788067_134789120_134789229_134789499
ENSMUSG00000072966.12_1	chrX	+	3801	7	FSM	ENSMUSG00000072966.12	ENSMUST00000173804.8	3814	7	9	4	9	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATGACCCTTCTTCACT	NA	NA	NA	NA	NA	NA	NA	NA	134739791	134745475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134740012_134740493_134740622_134741141_134741219_134741367_134741440_134741601_134741674_134741969_134742053_134742326
ENSMUSG00000072969.3_0	chrX	+	2744	4	FSM	ENSMUSG00000072969.3	ENSMUST00000096321.3	2779	4	27	8	27	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAATGAAAACATTGT	NA	NA	NA	NA	NA	NA	NA	NA	134643508	134648063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134643728_134644311_134644364_134645247_134645325_134645667
ENSMUSG00000072969.3_4	chrX	+	2756	2	FSM	ENSMUSG00000072969.3	ENST00000604957.1	2776	2	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCTAAACACAATGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	134645154	134648058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_134646391_134646538
ENSMUSG00000072972.4_0	chr12	-	2475	1	FSM	ENSMUSG00000072972.4	ENSMUST00000085319.4	2504	1	20	9	20	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTAGCATTGTGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	81468700	81466225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81466200_81468700
ENSMUSG00000072980.4_0	chr2	-	1063	6	FSM	ENSMUSG00000072980.4	ENSMUST00000123818.2	1082	6	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGAAATCATCTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	119448942	119440462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_119440846_119442232_119442337_119443492_119443575_119446012_119446136_119448334_119448402_119448638
ENSMUSG00000073002.10_0	chr6	-	573	2	FSM	ENSMUSG00000073002.10	ENSMUST00000206154.2	2619	2	1807	239	1807	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGCTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72347311	72346015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72346454_72347176
ENSMUSG00000073002.10_1	chr6	-	618	3	FSM	ENSMUSG00000073002.10	ENSMUST00000101285.10	623	3	0	5	0	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATGCTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	72357405	72346015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72346454_72347176_72347315_72357363
ENSMUSG00000073002.10_5	chr6	-	551	4	FSM	ENSMUSG00000073002.10	ENSMUST00000074231.6	553	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAAATGCTCTCTCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	72357449	72346016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72346163_72346272_72346454_72347176_72347315_72357363
ENSMUSG00000073008.12_0	chrX	+	3072	3	FSM	ENSMUSG00000073008.12	ENST00000645147.2	3093	3	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAAGTGAAGTATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	106299676	106338185	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_106300106_106312487_106312574_106335628
ENSMUSG00000073062.4_0	chrX	+	5586	1	FSM	ENSMUSG00000073062.4	ENSMUST00000101388.4	5619	1	18	15	18	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGTTAAGATAAATTAAT	NA	NA	NA	NA	NA	NA	NA	NA	93768192	93773778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_93768200_93773800
ENSMUSG00000073067.11_0	chr6	-	4451	14	FSM	ENSMUSG00000073067.11	ENSMUST00000145111.8	4486	14	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGCCTACTGTGTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	54407178	54246672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_54248346_54266785_54266867_54269755_54269904_54272303_54272357_54276915_54277051_54277399_54277440_54277775_54278288_54279540_54279669_54283762_54283991_54284292_54284405_54308841_54308996_54378009_54378174_54380570_54380721_54406305
ENSMUSG00000073069.3_0	chrX	+	1543	2	FSM	ENSMUSG00000073069.3	ENSMUST00000201779.2	1551	2	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAATTCATTAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	90375296	90376959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_90375345_90375464
ENSMUSG00000073069.3_1	chrX	+	1465	1	FSM	ENSMUSG00000073069.3	ENSMUST00000101397.2	1143	1	138	-460	138	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCATTAGAAAGTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	90375498	90376963	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_90375500_90377000
ENSMUSG00000073077.8_0	chrX	-	961	7	FSM	ENSMUSG00000073077.8	ENST00000313548.5	974	7	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTTAAACATACAGG	NA	NA	NA	NA	NA	NA	NA	NA	78473581	78445252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_78445351_78445626_78445722_78454044_78454235_78459090_78459210_78460414_78460497_78472141_78472364_78473426
ENSMUSG00000073077.8_2	chrX	-	2590	15	FSM	ENSMUSG00000073077.8	ENST00000297866.9	2609	15	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATTTCTCTTCAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	78559595	78526207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_78526341_78532111_78532354_78532640_78532858_78534536_78534626_78534720_78534918_78537283_78537437_78540173_78540391_78541495_78541686_78548729_78548966_78551527_78551656_78553481_78553643_78553894_78554124_78556249_78556389_78558184_78558301_78559452
ENSMUSG00000073079.7_0	chr12	+	4478	16	FSM	ENSMUSG00000073079.7	ENSMUST00000220578.2	4498	16	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAAGATCTGGATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	55127059	55162145	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55127522_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_15	chr12	+	2008	14	FSM	ENSMUSG00000073079.7	ENST00000546080.6	2035	14	13	14	13	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	1194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55127245	55160038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55127522_55135954_55136065_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_19	chr12	+	1987	16	FSM	ENSMUSG00000073079.7	ENST00000678963.1	2001	16	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55127232	55160038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55127311_55135954_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_33	chr12	+	2037	15	FSM	ENSMUSG00000073079.7	ENST00000678627.1	2061	15	10	14	10	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55127303	55160038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55127522_55135954_55136065_55136920_55137008_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073079.7_44	chr12	+	1911	15	FSM	ENSMUSG00000073079.7	ENSMUST00000021407.11	1515	15	-34	-362	-34	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55135952	55160038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55136065_55136920_55137013_55138033_55138119_55142599_55142705_55143893_55143961_55144040_55144099_55146697_55146849_55148124_55148274_55148607_55148709_55149252_55149340_55151975_55152050_55152401_55152511_55155286_55155458_55157870_55157967_55159584
ENSMUSG00000073096.12_0	chr6	+	2897	3	FSM	ENSMUSG00000073096.12	ENSMUST00000114545.8	2913	3	9	7	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTAGTTGGTCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	48531738	48547649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48531917_48533888_48534029_48545070
ENSMUSG00000073096.12_1	chr6	+	2654	2	FSM	ENSMUSG00000073096.12	ENSMUST00000101436.3	2674	2	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTAGTTGGTCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	48531752	48547649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48531828_48545070
ENSMUSG00000073131.13_0	chrX	+	4632	4	FSM	ENSMUSG00000073131.13	ENSMUST00000114577.8	4652	4	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTACTGTGCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	70859542	70868305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70859941_70860076_70860306_70863673_70863784_70864410
ENSMUSG00000073131.13_1	chrX	+	4178	3	FSM	ENSMUSG00000073131.13	ENSMUST00000114576.9	4195	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTACTGTGCTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	70860373	70868305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_70860547_70863673_70863784_70864410
ENSMUSG00000073139.10_0	chrX	-	2414	6	FSM	ENSMUSG00000073139.10	ENSMUST00000101506.10	2429	6	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	936	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTATACTGTGTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	69520778	69503365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_69504899_69505796_69505921_69506450_69506628_69510759_69510968_69513723_69513901_69520583
ENSMUSG00000073147.4_0	chr5	-	1465	7	FSM	ENSMUSG00000073147.4	ENSMUST00000185943.2	1477	7	9	3	-6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGAGAACTATGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	23638313	23587308	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23587528_23589143_23589669_23590072_23590171_23591861_23592036_23595053_23595305_23600261_23600354_23638207
ENSMUSG00000073147.4_6	chr5	-	709	3	FSM	ENSMUSG00000073147.4	ENSMUST00000191186.2	719	3	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTAGACATTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	23638302	23627406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23627901_23628221_23628342_23638207
ENSMUSG00000073147.4_8	chr5	-	2106	1	FSM	ENSMUSG00000073147.4	ENSMUST00000101522.3	2110	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATTGTGGAATAACCTTT	NA	NA	NA	NA	NA	NA	NA	NA	23638913	23636807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23636800_23638900
ENSMUSG00000073155.13_0	chr6	+	2505	3	FSM	ENSMUSG00000073155.13	ENSMUST00000152147.8	2521	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGAAAAGGCTGTCTGCC	NA	NA	NA	NA	NA	NA	NA	NA	35229595	35240422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_35229718_35237344_35237399_35238093
ENSMUSG00000073155.13_4	chr6	+	685	4	FSM	ENSMUSG00000073155.13	ENSMUST00000130875.8	690	4	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCAGTTTCTGGTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	35229651	35238568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_35229718_35229890_35229981_35237344_35237399_35238093
ENSMUSG00000073158.5_0	chr12	-	2237	4	FSM	ENSMUSG00000073158.5	ENSMUST00000101538.5	2245	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACCTTGTCTGTGAAATT	NA	NA	NA	NA	NA	NA	NA	NA	24147239	24093202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_24094856_24124359_24124421_24124622_24124750_24146843
ENSMUSG00000073164.12_0	chr12	-	3333	5	FSM	ENSMUSG00000073164.12	ENSMUST00000149246.8	3370	5	27	10	27	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATAAACCAAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	23060258	23004009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_23004839_23008352_23010256_23042788_23042850_23043051_23043179_23059845
ENSMUSG00000073176.5_0	chrX	+	3733	5	FSM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATGCTCTTTCTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	55391759	55411029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55391800_55393642_55394089_55398822_55399028_55407826_55407941_55408101
ENSMUSG00000073176.5_1	chrX	+	3682	4	ISM	ENSMUSG00000073176.5	ENSMUST00000101560.4	3738	5	1888	11	1888	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATATATGCTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	55393647	55411023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_55394089_55398822_55399028_55407826_55407941_55408101
ENSMUSG00000073177.9_0	chrX	-	951	8	FSM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTTTGCAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	55258241	55235186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032_55248151_55258173
ENSMUSG00000073177.9_1	chrX	-	883	7	ISM	ENSMUSG00000073177.9	ENSMUST00000101561.8	951	8	10091	0	10091	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTTTTTGCAATGTTA	NA	NA	NA	NA	NA	NA	NA	NA	55248150	55235186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_55235530_55239012_55239112_55241930_55242031_55242833_55242952_55246943_55246979_55247366_55247437_55248032
ENSMUSG00000073197.10_0	chr12	+	2526	4	FSM	ENSMUSG00000073197.10	ENSMUST00000177778.9	2542	4	14	2	14	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCCTTGTATTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18564524	18585253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_18564937_18581610_18581738_18581935_18581997_18583327
ENSMUSG00000073197.10_1	chr12	+	2418	4	FSM	ENSMUSG00000073197.10	ENSMUST00000063216.6	2431	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTAACTCCTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	18564554	18585247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_18564865_18581610_18581738_18581935_18581997_18583327
ENSMUSG00000073234.5_0	chr5	+	1262	2	FSM	ENSMUSG00000073234.5	ENSMUST00000101627.5	1268	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGGTGGTTTTCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5623804	5626203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_5624168_5625304
ENSMUSG00000073236.5_0	chr2	-	1889	2	FSM	ENSMUSG00000073236.5	ENSMUST00000128026.2	1898	2	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCCTCATTAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	153187729	153183084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_153184785_153187540
ENSMUSG00000073375.4_0	chr17	-	1754	1	FSM	ENSMUSG00000073375.4	ENSMUST00000097290.4	1760	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTGGAGCCTTGGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67939718	67937964	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_67938000_67939700
ENSMUSG00000073394.5_0	chr17	+	781	2	FSM	ENSMUSG00000073394.5	ENSMUST00000097320.3	792	2	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTACCAAAATCCCCGGC	NA	NA	NA	NA	NA	NA	NA	NA	45046734	45048491	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45047251_45048226
ENSMUSG00000073403.12_0	chr17	-	934	5	FSM	ENSMUSG00000073403.12	ENSMUST00000174094.2	934	5	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAGAAAGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	36456815	36452649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_36452926_36453223_36453272_36455803_36456080_36456279_36456550_36456751
ENSMUSG00000073403.12_1	chr17	-	871	4	ISM	ENSMUSG00000073403.12	ENSMUST00000174094.2	934	5	265	0	86	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATTAGAAAGGATCT	NA	NA	NA	NA	NA	NA	NA	NA	36456550	36452649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_36452926_36453223_36453272_36455803_36456080_36456279
ENSMUSG00000073411.13_0	chr17	+	2087	8	FSM	ENSMUSG00000073411.13	ENSMUST00000172785.8	2102	8	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6535	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCTGGGTCACTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	35481716	35486471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35482163_35482354_35482625_35482814_35483091_35484759_35485036_35485162_35485280_35485457_35485491_35485663_35485703_35485841
ENSMUSG00000073422.12_0	chr17	-	900	8	ISM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	225	1	211	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34246805	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
ENSMUSG00000073422.12_1	chr17	-	1132	8	FSM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34247028	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUSG00000073422.12_2	chr17	-	1058	7	ISM	ENSMUSG00000073422.12	ENSMUST00000237759.2	1133	8	235	1	223	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34246793	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596
ENSMUSG00000073422.12_3	chr17	-	962	9	FSM	ENSMUSG00000073422.12	ENSMUST00000045467.14	965	9	2	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34247028	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34245910_34245989_34246076_34246176_34246270_34246379_34246497_34246596_34246815_34246975
ENSMUSG00000073423.11_0	chr17	+	1194	7	FSM	ENSMUSG00000073423.11	ENSMUST00000166627.8	1211	7	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAATGACTGGTACCT	NA	NA	NA	NA	NA	NA	NA	NA	33848072	33850682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33848191_33848595_33848673_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUSG00000073423.11_2	chr17	+	1189	6	FSM	ENSMUSG00000073423.11	ENSMUST00000073570.12	1197	6	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCTGAGTGCTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	33848069	33850751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33848191_33848770_33849054_33849340_33849449_33849549_33849656_33850102_33850438_33850515
ENSMUSG00000073427.5_0	chr10	+	472	5	FSM	ENSMUSG00000073427.5	ENSMUST00000211099.2	490	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCACTCTTAGAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	82190099	82236673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_82190216_82204404_82204532_82204731_82204793_82219596_82219679_82236587
ENSMUSG00000073433.12_0	chr17	-	1005	6	FSM	ENSMUSG00000073433.12	ENSMUST00000025019.9	1032	6	27	0	27	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGCTGCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	26420297	26418156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26418504_26418586_26418651_26418725_26418803_26418988_26419073_26419164_26419345_26420044
ENSMUSG00000073434.13_0	chr17	-	5976	41	FSM	ENSMUSG00000073434.13	ENSMUST00000079461.15	5991	41	7	8	7	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCGATACATTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26080442	26063752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079628_26079792_26079880_26080058_26080158
ENSMUSG00000073434.13_1	chr17	-	5932	41	FSM	ENSMUSG00000073434.13	ENSMUST00000176923.9	5962	41	23	7	-3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCGATACATTGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	26080452	26063752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26064200_26064348_26064434_26064552_26064673_26064744_26064889_26064972_26065104_26065213_26065389_26065497_26065621_26066773_26066946_26067300_26067413_26067501_26067671_26067946_26068138_26068227_26068388_26068536_26068659_26068841_26068945_26069391_26069490_26069720_26069913_26070369_26070502_26070691_26070733_26070805_26070922_26071129_26071259_26071371_26071534_26071799_26071931_26072695_26072827_26073011_26073152_26073503_26073740_26074091_26074209_26074274_26074406_26074481_26074644_26074732_26074852_26075935_26075994_26076072_26076219_26076298_26076410_26077709_26077779_26078073_26078293_26078362_26078467_26078831_26078900_26078992_26079108_26079345_26079517_26079682_26079792_26079880_26080058_26080158
ENSMUSG00000073435.11_0	chr17	+	708	5	FSM	ENSMUSG00000073435.11	ENSMUST00000024978.7	715	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTTCAAGACAAAAGTAG	NA	NA	NA	NA	NA	NA	NA	NA	25115473	25116489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25115534_25115601_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073435.11_2	chr17	+	552	4	FSM	ENSMUSG00000073435.11	ENST00000563498.1	586	4	29	5	29	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGATGTTATTGCAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	25115508	25116300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25115733_25115825_25115928_25116001_25116115_25116187
ENSMUSG00000073436.12_4	chr17	-	5214	7	FSM	ENSMUSG00000073436.12	ENSMUST00000119848.8	5226	7	4	8	4	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTCCAAGGCCTGCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	25114025	25107467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ENSMUSG00000073436.12_5	chr17	-	1502	8	FSM	ENSMUSG00000073436.12	ENSMUST00000121542.2	1521	8	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACAGGCAGCTTGGGCATT	NA	NA	NA	NA	NA	NA	NA	NA	25114051	25111134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_25111658_25111728_25111919_25112012_25112129_25112278_25112373_25112524_25112617_25113104_25113198_25113544_25113682_25113794
ENSMUSG00000073437.11_0	chr17	-	1893	7	FSM	ENSMUSG00000073437.11	ENSMUST00000181014.8	1903	7	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGTATTTTATATGTA	NA	NA	NA	NA	NA	NA	NA	NA	24633400	24623629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24624313_24628837_24629146_24629231_24629328_24630898_24631058_24631440_24631549_24632478_24632903_24633285
ENSMUSG00000073437.11_1	chr17	-	1227	5	FSM	ENSMUSG00000073437.11	ENSMUST00000181259.8	1256	5	13	16	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAGAAAGGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	24633474	24628470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24629146_24629231_24629328_24630898_24631058_24631440_24631549_24633285
ENSMUSG00000073468.13_0	chr17	+	1029	8	FSM	ENSMUSG00000073468.13	ENSMUST00000154553.2	1049	8	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	677	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAACATTTTCTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	8529945	8546266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8530118_8537675_8537763_8538250_8538334_8539431_8539514_8540631_8540668_8542108_8542168_8543265_8543296_8545786
ENSMUSG00000073471.4_0	chr17	+	2211	8	FSM	ENSMUSG00000073471.4	ENSMUST00000232223.2	2225	8	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATCAGTGTCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	8164454	8198651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8165136_8171380_8171466_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUSG00000073471.4_2	chr17	+	2175	8	FSM	ENSMUSG00000073471.4	ENSMUST00000097423.3	2189	8	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATCAGTGTCTGACAA	NA	NA	NA	NA	NA	NA	NA	NA	8164493	8198651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_8165136_8171380_8171469_8188978_8189121_8191655_8191802_8192768_8192973_8194876_8195040_8197549_8197637_8197948
ENSMUSG00000073481.10_0	chr1	-	1908	8	FSM	ENSMUSG00000073481.10	ENSMUST00000068725.10	1917	8	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1410	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTCCTCTGTGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	184578069	184545264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_184546081_184551397_184551545_184554531_184554604_184554685_184554748_184564772_184564914_184566056_184566226_184573450_184573625_184577742
ENSMUSG00000073489.7_0	chr1	-	2285	9	FSM	ENSMUSG00000073489.7	ENSMUST00000111214.4	2296	9	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCAGTGTGCCTTTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	173594477	173574861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173575187_173576760_173576950_173579193_173579611_173580275_173580465_173583172_173583596_173587034_173587194_173587695_173587893_173589164_173589450_173594376
ENSMUSG00000073529.10_0	chr18	-	2875	3	FSM	ENSMUSG00000073529.10	ENSMUST00000143732.8	2891	3	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATATATAATTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	77884437	77880968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_77882648_77883142_77884259_77884357
ENSMUSG00000073542.4_0	chr18	-	3554	12	FSM	ENSMUSG00000073542.4	ENSMUST00000097542.4	3576	12	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTAGTTTTGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	67774389	67750874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67770208_67770434_67771335_67771412_67773077_67773234_67774181
ENSMUSG00000073542.4_6	chr18	-	1977	11	FSM	ENSMUSG00000073542.4	ENST00000423709.6	1997	11	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTGTATAATAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	67774273	67752110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67771335_67771412_67773077_67773234_67774181
ENSMUSG00000073542.4_7	chr18	-	1887	10	ISM	ENSMUSG00000073542.4	ENST00000423709.6	1997	11	1049	9	1049	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTGTATAATAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	67773235	67752110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_67752443_67752605_67752824_67756206_67756541_67757999_67758167_67759589_67759779_67762888_67763018_67766520_67766619_67767824_67768011_67771335_67771412_67773077
ENSMUSG00000073557.13_0	chr1	-	3800	24	FSM	ENSMUSG00000073557.13	ENST00000391959.5	3813	24	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTAACCTAGGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	134883663	134687609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134797805_134797989_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_2	chr1	-	3614	23	FSM	ENSMUSG00000073557.13	ENST00000608999.6	3630	23	12	4	-9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTAACCTAGGAACATC	NA	NA	NA	NA	NA	NA	NA	NA	134883660	134687609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134688234_134699735_134699787_134701163_134701218_134704113_134704219_134705052_134705198_134762153_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134800544_134800671_134801676_134801760_134803702_134803904_134807366_134807484_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073557.13_31	chr1	-	1637	13	FSM	ENSMUSG00000073557.13	ENST00000367272.4	1652	13	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTCAAAGAAGCTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	134830242	134762189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134762215_134763522_134763636_134763715_134763906_134765590_134765780_134770380_134770472_134793515_134793699_134814160_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115
ENSMUSG00000073557.13_36	chr1	-	1559	9	FSM	ENSMUSG00000073557.13	ENST00000356764.6	1575	9	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTGAAGTACAGACTG	NA	NA	NA	NA	NA	NA	NA	NA	134883632	134803601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_134803904_134814156_134814301_134815012_134815093_134818493_134818569_134819895_134820041_134821087_134821248_134824080_134824200_134830115_134830247_134883229
ENSMUSG00000073563.4_0	chr18	+	4183	13	FSM	ENSMUSG00000073563.4	ENSMUST00000069597.8	4249	13	46	20	-20	-20	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AACTGAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53995239	54088600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065262_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ENSMUSG00000073563.4_13	chr18	+	2353	12	FSM	ENSMUSG00000073563.4	ENST00000521364.5	2372	12	18	1	18	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCCTTAAGAGCCTACTG	NA	NA	NA	NA	NA	NA	NA	NA	54028618	54087222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ENSMUSG00000073563.4_2	chr18	+	4376	13	FSM	ENSMUSG00000073563.4	ENST00000345990.8	4383	13	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTTTAAATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	53995295	54088852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_53995673_54028602_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54081119_54081227_54081716_54081741_54086316
ENSMUSG00000073563.4_21	chr18	+	2209	12	FSM	ENSMUSG00000073563.4	ENST00000361991.6	2226	12	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGGAGCCCCTTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	54028826	54087214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_54029027_54035924_54035966_54039671_54039742_54050046_54050196_54051870_54052106_54063140_54063227_54063349_54063435_54065265_54065412_54066521_54066618_54069924_54070021_54081119_54081227_54086316
ENSMUSG00000073568.3_0	chr18	+	2146	4	FSM	ENSMUSG00000073568.3	ENSMUST00000097580.2	2169	4	17	6	17	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTGAAAGCTGGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	47059065	47067283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_47059157_47059378_47059483_47061585_47061726_47065472
ENSMUSG00000073598.4_0	chr18	+	2498	2	FSM	ENSMUSG00000073598.4	ENSMUST00000097617.3	2504	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTGTTTGTTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	35860047	35863922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35860150_35861526
ENSMUSG00000073600.6_0	chr18	-	4879	1	FSM	ENSMUSG00000073600.6	ENSMUST00000190196.5	4888	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGACAACCAAGTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	35788291	35783412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35783400_35788300
ENSMUSG00000073607.3_0	chr18	-	2620	2	FSM	ENSMUSG00000073607.3	ENSMUST00000097631.3	2629	2	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACATTTTGCTTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	34354822	34340833	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_34343167_34354535
ENSMUSG00000073609.10_0	chr1	+	3212	10	FSM	ENSMUSG00000073609.10	ENSMUST00000097633.10	3232	10	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATCTCTCCACACATT	NA	NA	NA	NA	NA	NA	NA	NA	93752977	93780066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93753042_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ENSMUSG00000073609.10_1	chr1	+	3453	10	FSM	ENSMUSG00000073609.10	ENSMUST00000112881.8	3459	10	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATCTCTCCACACATT	NA	NA	NA	NA	NA	NA	NA	NA	93752997	93780066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93753303_93754006_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ENSMUSG00000073609.10_2	chr1	+	3143	9	ISM	ENSMUSG00000073609.10	ENSMUST00000112881.8	3459	10	1016	4	1016	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATCTCTCCACACATT	NA	NA	NA	NA	NA	NA	NA	NA	93754011	93780066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_93754363_93756927_93756986_93757478_93757619_93760317_93760512_93763008_93763178_93765661_93765806_93766542_93766686_93775824_93775991_93778288
ENSMUSG00000073616.11_0	chr1	-	426	3	FSM	ENSMUSG00000073616.11	ENSMUST00000097642.4	438	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATTCCTGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92569702	92564873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_92565126_92567408_92567482_92569601
ENSMUSG00000073616.11_3	chr1	-	327	2	ISM	ENSMUSG00000073616.11	ENSMUST00000112999.8	653	3	803	7	803	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAATTCCTGTGCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	92567483	92564873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_92565126_92567408
ENSMUSG00000073627.8_0	chr1	+	3103	3	FSM	ENSMUSG00000073627.8	ENSMUST00000137643.2	3109	3	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAACTTTAGTCTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	86287309	86301511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86287422_86294854_86295442_86299107
ENSMUSG00000073633.10_0	chr1	+	887	4	FSM	ENSMUSG00000073633.10	ENSMUST00000097672.4	901	4	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTGTGTTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84817569	84878202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_84817690_84858812_84858922_84874210_84874384_84877717
ENSMUSG00000073639.7_0	chr18	+	6496	7	FSM	ENSMUSG00000073639.7	ENSMUST00000234810.2	6515	7	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	3027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGCCATAATGCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	6765154	6794420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_6765333_6770053_6770110_6778494_6778557_6783119_6783193_6784569_6784689_6784938_6785006_6788479
ENSMUSG00000073639.7_5	chr18	+	118	2	FSM	ENSMUSG00000073639.7	ENST00000413405.5	128	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAGGTGAGCTAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	6765237	6770101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_6765308_6770053
ENSMUSG00000073640.4_0	chr18	+	466	1	FSM	ENSMUSG00000073640.4	ENSMUST00000097682.4	411	1	-36	-19	-36	19	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAAAAATTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6332595	6333061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_6332600_6333100
ENSMUSG00000073643.12_0	chr1	-	4539	12	FSM	ENSMUSG00000073643.12	ENSMUST00000113512.8	4551	12	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	915	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTGTAATTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	79739476	79679980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_79683288_79683960_79684070_79685168_79685300_79686809_79686912_79691574_79691681_79692590_79692718_79702361_79702475_79704282_79704434_79707372_79707428_79711516_79711591_79717778_79717847_79739280
ENSMUSG00000073664.12_0	chr1	+	8469	56	FSM	ENSMUSG00000073664.12	ENST00000683969.1	8481	56	7	5	-2	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCCTTCCGCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	60219755	60370150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60219836_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60267780_60267868_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297902_60299400_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ENSMUSG00000073664.12_12	chr1	+	15722	55	FSM	ENSMUSG00000073664.12	ENSMUST00000160834.8	15731	55	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTGGTTTGTAGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	60219762	60377483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_60219845_60220621_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297898_60299391_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ENSMUSG00000073664.12_22	chr1	+	8389	55	ISM	ENSMUSG00000073664.12	ENST00000683969.1	8481	56	873	5	864	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCCTTCCGCCTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	60220621	60370150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_60220914_60233662_60233755_60234173_60234336_60239263_60239346_60240022_60240151_60245492_60245576_60256354_60256441_60261225_60261533_60263783_60263891_60267780_60267868_60269760_60269845_60273955_60274055_60274139_60274721_60275529_60275663_60276255_60276376_60277730_60278035_60281697_60281784_60283952_60284043_60286774_60286944_60287521_60287656_60290193_60290354_60290462_60290566_60292510_60292668_60294052_60294212_60296588_60296749_60297808_60297902_60299400_60299953_60300568_60300745_60303437_60303592_60304040_60304170_60306917_60307224_60307541_60307692_60309430_60309589_60311291_60311417_60316283_60316411_60317071_60317221_60317825_60317960_60318857_60318960_60320405_60320502_60320983_60321109_60323141_60323283_60326469_60326601_60329073_60329184_60330992_60331111_60332025_60332124_60335037_60335155_60344433_60344524_60349362_60349473_60350085_60350259_60351309_60351405_60358475_60358593_60358829_60358992_60367218_60367368_60368485_60368622_60370049
ENSMUSG00000073676.5_0	chr1	+	753	4	FSM	ENSMUSG00000073676.5	ENSMUST00000075242.7	774	4	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	3021	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAATGAGTGGACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	55127301	55130456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55127572_55128209_55128375_55129871_55129962_55130228
ENSMUSG00000073678.5_15	chr1	-	1032	10	FSM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAAAGCTGAGCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	54590283	54563505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_54563527_54564526_54564574_54567670_54567755_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135
ENSMUSG00000073678.5_26	chr1	-	1009	9	ISM	ENSMUSG00000073678.5	ENST00000409188.5	1042	10	10	1023	10	-1023	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTTTTTGAACTGATT	NA	NA	NA	NA	NA	NA	NA	NA	54590281	54564526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_54564574_54567670_54567755_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135
ENSMUSG00000073678.5_3	chr1	-	2021	20	FSM	ENSMUSG00000073678.5	ENST00000409475.5	2040	20	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAATTATAGATCATT	NA	NA	NA	NA	NA	NA	NA	NA	54596737	54533794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_54534051_54549186_54549226_54550552_54550662_54551059_54551127_54551755_54551808_54551930_54552005_54553995_54554072_54560450_54560529_54563474_54563527_54564526_54564574_54567670_54567755_54569275_54569332_54570012_54570119_54571180_54571248_54572577_54572631_54575113_54575272_54582196_54582369_54587097_54587274_54590135_54590290_54596592
ENSMUSG00000073684.14_0	chr4	+	1062	4	FSM	ENSMUSG00000073684.14	ENSMUST00000178473.8	1076	4	10	4	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTTTCCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	155334432	155341140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155334520_155334962_155335108_155335212_155335494_155340591
ENSMUSG00000073684.14_2	chr4	+	1464	3	FSM	ENSMUSG00000073684.14	ENSMUST00000097747.9	1479	3	14	1	14	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATTTTGTTTCCTTCATA	NA	NA	NA	NA	NA	NA	NA	NA	155334473	155341140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155335108_155335212_155335494_155340591
ENSMUSG00000073700.4_0	chr4	+	3974	4	FSM	ENSMUSG00000073700.4	ENSMUST00000097773.4	3986	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGCTGGGTGTCATGGCC	NA	NA	NA	NA	NA	NA	NA	NA	152093268	152102134	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_152094421_152096756_152097163_152098763_152098837_152099791
ENSMUSG00000073702.12_0	chr1	+	1032	5	FSM	ENSMUSG00000073702.12	ENSMUST00000086535.12	1049	5	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	5586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACATTAAAGGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	39406927	39410980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39407016_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUSG00000073702.12_4	chr1	+	475	5	FSM	ENSMUSG00000073702.12	ENSMUST00000178079.8	487	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTGCCTTCAGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	39407014	39410438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39407088_39407229_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUSG00000073702.12_5	chr1	+	941	4	FSM	ENSMUSG00000073702.12	ENSMUST00000179954.8	630	4	220	-531	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGACAAACATTAAAGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	39407229	39410977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39407337_39409094_39409221_39410034_39410148_39410382
ENSMUSG00000073705.11_0	chr4	-	1102	5	FSM	ENSMUSG00000073705.11	ENSMUST00000030813.10	1110	5	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATGTCTGCTTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	149222079	149212655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_149213386_149214609_149214677_149216095_149216130_149216715_149216840_149221932
ENSMUSG00000073725.9_0	chr1	+	1986	16	FSM	ENSMUSG00000073725.9	ENST00000649028.1	2005	16	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACAGAGTTTCCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	24626425	24802020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_24626655_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_3	chr1	+	4438	16	FSM	ENSMUSG00000073725.9	ENSMUST00000191471.7	4453	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGACTTCGACTAATGAACA	NA	NA	NA	NA	NA	NA	NA	NA	24717721	24804525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_24717898_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073725.9_8	chr1	+	5202	16	FSM	ENSMUSG00000073725.9	ENSMUST00000095062.10	5228	16	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCAAGTGTTTGAGTTG	NA	NA	NA	NA	NA	NA	NA	NA	24718024	24805374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_24718116_24724477_24724655_24732021_24732083_24743901_24744000_24745057_24745126_24750592_24750682_24753989_24754064_24767626_24767753_24770827_24770981_24782963_24783029_24783336_24783440_24783946_24784052_24785885_24786036_24787880_24787960_24801272_24801365_24801703
ENSMUSG00000073755.5_0	chr4	+	2847	2	FSM	ENSMUSG00000073755.5	ENSMUST00000164362.2	2855	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTCAATTGTTCCAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	126503646	126508156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126503806_126505468
ENSMUSG00000073771.12_0	chr4	-	1609	8	FSM	ENSMUSG00000073771.12	ENSMUST00000183310.2	1620	8	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCAAGCTTTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	116982807	116977374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116978059_116978167_116978294_116978394_116978527_116978610_116978680_116979415_116979476_116980925_116980980_116981135_116981338_116982525
ENSMUSG00000073775.5_0	chr4	+	1615	1	FSM	ENSMUSG00000073775.5	ENSMUST00000102738.4	1629	1	7	7	7	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	838	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTACCTGCTGGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	108704988	108706603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_108705000_108706600
ENSMUSG00000073791.14_1	chr4	+	2305	14	FSM	ENSMUSG00000073791.14	ENSMUST00000239516.1	2319	14	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99717448	99769978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99717692_99719626_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ENSMUSG00000073791.14_3	chr4	+	2113	14	FSM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	1	7	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99717737	99769978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99717792_99719629_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ENSMUSG00000073791.14_8	chr4	+	2057	13	ISM	ENSMUSG00000073791.14	ENSMUST00000136874.4	2121	14	1895	7	1895	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTATGTGACTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	99719631	99769978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_99719818_99731496_99731709_99732648_99732736_99735289_99735486_99735908_99736028_99746056_99746199_99754598_99754709_99757733_99757892_99758840_99758975_99761882_99762032_99766776_99766987_99768120_99768229_99769732
ENSMUSG00000073792.12_0	chr4	+	3073	15	FSM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	0	6	0	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGCCTTGTTTGCGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	99603901	99651691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_99603944_99607267_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUSG00000073792.12_6	chr4	+	3023	14	ISM	ENSMUSG00000073792.12	ENSMUST00000097961.9	3079	15	3372	8	3372	-8	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTAGCCTTGTTTGCGTG	NA	NA	NA	NA	NA	NA	NA	NA	99607273	99651689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_99607471_99615099_99615185_99626360_99626451_99627450_99627540_99629770_99629854_99630591_99630657_99631991_99632178_99632726_99632863_99634562_99634649_99636922_99637008_99638965_99639037_99641053_99641123_99641229_99641429_99650107
ENSMUSG00000073838.11_0	chr7	+	1660	10	FSM	ENSMUSG00000073838.11	ENSMUST00000098048.6	1679	10	11	8	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2066	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATAACTCAGCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	126086543	126089891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_126086663_126086759_126086955_126087431_126087599_126087821_126087927_126088008_126088174_126088291_126088425_126088507_126088613_126088723_126088876_126088963_126089084_126089492
ENSMUSG00000073856.12_0	chr7	+	2010	9	FSM	ENSMUSG00000073856.12	ENSMUST00000106547.2	2026	9	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGGGGTTATTCCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	118455013	118571875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_118455185_118472043_118472109_118475464_118475595_118476822_118476921_118498852_118498906_118499031_118499110_118514733_118514819_118540807_118540920_118570657
ENSMUSG00000073889.11_1	chr4	+	682	6	ISM	ENSMUSG00000036073.18	ENST00000556278.1	771	7	397	0	397	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTAGTGGAAGGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	41755959	41764878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_41756131_41756938_41756996_41757155_41757279_41763581_41763682_41763824_41763886_41764708
ENSMUSG00000073889.11_6	chr4	+	2003	13	FSM	ENSMUSG00000073889.11	ENSMUST00000098132.11	2009	13	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCGTCTAATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	41760200	41769473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41760552_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_8	chr4	+	1827	14	FSM	ENSMUSG00000073889.11	ENSMUST00000108040.8	1837	14	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCGTCTAATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	41760462	41769473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41760552_41761076_41761163_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073889.11_9	chr4	+	1743	13	FSM	ENSMUSG00000073889.11	ENSMUST00000108042.3	1768	13	24	1	24	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGTCGTCTAATGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	41762332	41769473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_41762424_41763581_41763682_41763824_41763886_41764708_41764879_41765006_41765122_41765274_41765308_41765385_41765553_41766110_41766275_41767459_41767602_41767945_41768072_41768168_41768266_41768492_41768576_41769079
ENSMUSG00000073924.6_0	chr7	+	4068	2	FSM	ENSMUSG00000073924.6	ENSMUST00000215575.3	4091	2	20	3	20	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTGGGAAGGGGGACA	NA	NA	NA	NA	NA	NA	NA	NA	104263181	104270807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_104263268_104266825
ENSMUSG00000073968.5_0	chr7	-	2370	7	FSM	ENSMUSG00000073968.5	ENSMUST00000082175.7	2388	7	13	5	13	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCACAGATCACGAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	102336521	102326793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_102328045_102328242_102328344_102328880_102328904_102329343_102329605_102330869_102330966_102333254_102333719_102336347
ENSMUSG00000073968.5_4	chr7	-	2291	6	FSM	ENSMUSG00000073968.5	ENSMUST00000210855.2	2301	6	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAACTCAATCCACAGATC	NA	NA	NA	NA	NA	NA	NA	NA	102336473	102326801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_102328045_102328242_102328344_102329343_102329605_102330869_102330966_102333254_102333719_102336347
ENSMUSG00000073982.12_0	chr7	-	1260	2	FSM	ENSMUSG00000073982.12	ENSMUST00000098230.11	1269	2	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGGCTCCTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	101899325	101888333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101889520_101899251
ENSMUSG00000073982.12_1	chr7	-	1317	3	FSM	ENSMUSG00000073982.12	ENSMUST00000106923.2	1321	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGGCTCCTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	101899295	101888333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_101889520_101898508_101898596_101899251
ENSMUSG00000073982.12_2	chr7	-	1243	2	ISM	ENSMUSG00000073982.12	ENSMUST00000106923.2	1321	3	730	4	730	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGGCTCCTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	101898565	101888333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_101889520_101898508
ENSMUSG00000073982.12_3	chr7	-	1188	1	NIC	ENSMUSG00000073982.12	novel	1321	3	NA	NA	9774	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCCCTGGCTCCTCCCTA	NA	NA	NA	NA	NA	NA	NA	NA	101889521	101888333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_101888300_101889500
ENSMUSG00000073985.3_0	chr7	+	573	4	Antisense	novelGene_ENSMUSG00000032725.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAAGAGTGGTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	101489471	101492989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_+_101489609_101489800_101489932_101490016_101490204_101492871
ENSMUSG00000073987.5_0	chr4	+	1954	9	FSM	ENSMUSG00000073987.5	ENSMUST00000098242.4	1965	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACTGTTTTTGAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	20042062	20066750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_20042283_20046202_20046315_20049791_20049843_20052663_20052749_20054063_20054203_20057936_20058044_20058138_20058230_20063998_20064137_20065739
ENSMUSG00000074001.4_0	chr9	+	2351	6	FSM	ENSMUSG00000074001.4	ENSMUST00000098272.4	2370	6	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTAGCCCAGGATCTA	NA	NA	NA	NA	NA	NA	NA	NA	121606769	121612878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121607994_121608988_121609150_121609437_121609546_121609637_121609824_121611595_121611743_121612353
ENSMUSG00000074024.6_0	chr7	-	3803	1	FSM	ENSMUSG00000074024.6	ENSMUST00000182578.2	3832	1	4	25	4	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTCAAAAAAGAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92390672	92386869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92386900_92390700
ENSMUSG00000074028.5_0	chr9	-	1546	9	FSM	ENSMUSG00000074028.5	ENST00000311856.9	1562	9	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGCTCCCTGCAGGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	119038122	119022653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119022854_119023484_119023594_119023776_119023992_119024210_119024306_119024390_119024512_119024669_119024839_119025033_119025193_119025424_119025529_119037748
ENSMUSG00000074030.4_0	chr8	-	4582	1	FSM	ENSMUSG00000074030.4	ENSMUST00000098312.4	4598	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGAAATGGAAGTAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	125624435	125619853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_125619900_125624400
ENSMUSG00000074034.2_0	chr9	-	868	1	FSM	ENSMUSG00000074034.2	ENSMUST00000075898.4	882	1	5	9	5	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	115267644	115266776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_115266800_115267600
ENSMUSG00000074063.11_0	chr8	+	1981	6	FSM	ENSMUSG00000074063.11	ENSMUST00000152420.8	2005	6	23	1	-21	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGCCTGAGGAGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	120163879	120172994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120164033_120168133_120168242_120169171_120169309_120169654_120169847_120169930_120170023_120171695
ENSMUSG00000074064.7_0	chr8	+	2115	5	FSM	ENSMUSG00000074064.7	ENSMUST00000098367.5	2128	5	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTACTTCACTGTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	120121622	120137834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_120122210_120128219_120128333_120129172_120129330_120134294_120134445_120136726
ENSMUSG00000074071.12_0	chr7	+	2810	9	FSM	ENSMUSG00000074071.12	ENSMUST00000210558.2	2815	9	0	5	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTAGGACTTTCAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	67925742	68012835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_67925790_67950580_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ENSMUSG00000074071.12_2	chr7	+	2740	8	ISM	ENSMUSG00000074071.12	ENSMUST00000098378.9	2776	9	737	6	737	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTTAATTTTAGGACTTT	NA	NA	NA	NA	NA	NA	NA	NA	67950597	68012829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_67950712_67954299_67954400_67971567_67971654_67978969_67979148_67999981_68000165_68003356_68003492_68007932_68008037_68010989
ENSMUSG00000074088.7_0	chr4	+	1574	10	FSM	ENSMUSG00000074088.7	ENSMUST00000105994.4	1584	10	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAACCTTGTGACTTGG	NA	NA	NA	NA	NA	NA	NA	NA	130253934	130283819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_130254143_130256420_130256551_130258867_130258962_130261981_130262148_130271838_130271962_130277186_130277308_130278274_130278358_130279746_130279809_130282367_130282472_130283336
ENSMUSG00000074102.5_0	chr9	-	6482	1	FSM	ENSMUSG00000074102.5	ENSMUST00000055843.9	6511	1	15	14	15	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATTAAAGAAAAAGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	106764612	106758130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_106758100_106764600
ENSMUSG00000074129.15_0	chr7	-	974	7	ISM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	1197	7	1062	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44776988	44774988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919
ENSMUSG00000074129.15_1	chr7	-	1039	8	FSM	ENSMUSG00000074129.15	ENSMUST00000150350.9	1047	8	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	10599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTACGATGTGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	44778184	44774988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44778123
ENSMUSG00000074129.15_14	chr7	-	654	7	FSM	ENSMUSG00000074129.15	ENST00000621674.4	661	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	876	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCCAACTAGGGAAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	44778207	44775320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776929_44776993_44778123
ENSMUSG00000074136.10_0	chr8	+	2773	4	FSM	ENSMUSG00000074136.10	ENSMUST00000145562.8	2803	4	30	0	30	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAACTATCTCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	96533487	96548356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96535809_96536858_96536926_96542995_96543075_96548050
ENSMUSG00000074141.14_0	chr7	+	1857	2	FSM	ENSMUSG00000109511.2	ENST00000352066.8	1868	2	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAGCCACGCGTGAGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	44465776	44479562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44465908_44477836
ENSMUSG00000074165.11_0	chr7	+	3161	6	FSM	ENSMUSG00000074165.11	ENSMUST00000100275.10	3177	6	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAAACTCATATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	41282960	41300292	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_41283119_41284103_41284135_41292756_41292857_41296906_41297042_41297242_41297304_41297616
ENSMUSG00000074165.11_1	chr7	+	3025	4	FSM	ENSMUSG00000074165.11	ENSMUST00000045720.14	3058	4	18	15	5	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATGGAAATATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	41283005	41300340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_41283119_41296914_41297042_41297242_41297304_41297616
ENSMUSG00000074166.8_0	chr7	-	3400	4	FSM	ENSMUSG00000074166.8	ENSMUST00000098509.5	3411	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGACAAATTTGCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	41149308	41128302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_41130924_41131989_41132051_41132256_41132384_41148717
ENSMUSG00000074170.6_0	chr7	-	5260	2	FSM	ENSMUSG00000074170.6	ENSMUST00000098513.6	5263	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAACATTACTGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	37927437	37916395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_37921583_37927364
ENSMUSG00000074170.6_1	chr7	-	5187	1	NIC	ENSMUSG00000074170.6	novel	5263	2	NA	NA	5856	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	155	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTAAAAAACATTACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	37921584	37916397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_37916400_37921600
ENSMUSG00000074171.3_0	chr8	-	1869	1	FSM	ENSMUSG00000074171.3	ENSMUST00000209493.2	1885	1	10	6	10	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCTATGGCTGTTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	91635034	91633165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_91633200_91635000
ENSMUSG00000074182.9_0	chr3	+	1114	11	FSM	ENSMUSG00000074182.9	ENSMUST00000199033.5	1127	11	7	6	7	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGGGAGAAAGTGCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	145281966	145309862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145282049_145282605_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074182.9_18	chr3	+	919	10	FSM	ENSMUSG00000074182.9	ENST00000431532.6	929	10	0	10	0	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGACAAGCAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	145282475	145306309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145282522_145282566_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212
ENSMUSG00000074182.9_26	chr3	+	870	9	ISM	ENSMUSG00000074182.9	ENST00000431532.6	929	10	94	10	94	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGACAAGCAGCTACT	NA	NA	NA	NA	NA	NA	NA	NA	145282569	145306309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212
ENSMUSG00000074182.9_6	chr3	+	2321	10	FSM	ENSMUSG00000074182.9	ENSMUST00000098534.9	2339	10	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTATAATGAACATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	145281998	145310544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145282752_145283856_145283923_145284006_145284114_145284199_145284286_145288283_145288388_145298570_145298640_145300354_145300436_145301878_145301957_145306212_145306335_145309689
ENSMUSG00000074183.4_0	chr9	+	862	7	FSM	ENSMUSG00000074183.4	ENSMUST00000098537.4	875	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATATGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78137942	78149958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78138013_78139499_78139609_78142365_78142418_78143211_78143345_78146766_78146909_78148808_78148941_78149734
ENSMUSG00000074183.4_3	chr9	+	791	6	ISM	ENSMUSG00000074183.4	ENSMUST00000098537.4	875	7	1560	11	1560	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAACTGGTATATGCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	78139497	78149955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_78139609_78142365_78142418_78143211_78143345_78146766_78146909_78148808_78148941_78149734
ENSMUSG00000074194.5_0	chr8	-	2883	4	FSM	ENSMUSG00000074194.5	ENSMUST00000098550.4	1587	4	-210	-1086	-210	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACAGCTGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	85846476	85835189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85837672_85838838_85838900_85840135_85840263_85846263
ENSMUSG00000074194.5_1	chr8	-	2938	5	FSM	ENSMUSG00000074194.5	ENSMUST00000211109.2	2946	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACAGCTGGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	85849724	85835189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85837672_85838838_85838900_85840135_85840263_85846263_85846499_85849691
ENSMUSG00000074203.5_0	chr8	+	710	2	FSM	ENSMUSG00000074203.5	ENSMUST00000098571.5	721	2	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAACAGTGGTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	85449641	85453468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_85449901_85453017
ENSMUSG00000074207.11_0	chr3	+	1475	9	FSM	ENSMUSG00000074207.11	ENSMUST00000004232.10	1492	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGAAACTGAGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	137983263	137996451	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137983498_137985491_137985594_137986134_137986274_137988196_137988285_137988375_137988596_137992452_137992714_137994509_137994646_137995562_137995702_137996295
ENSMUSG00000074210.4_0	chr7	+	2469	1	FSM	ENSMUSG00000074210.4	ENSMUST00000098585.4	1733	1	-334	-402	-334	402	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCAGCTTGTGGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	30020830	30023299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30020800_30023300
ENSMUSG00000074211.5_0	chr7	-	2476	1	FSM	ENSMUSG00000074211.5	ENSMUST00000098586.5	2490	1	9	5	9	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAATCTTGTTGATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30023311	30020835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30020800_30023300
ENSMUSG00000074212.8_0	chr3	+	9455	8	FSM	ENSMUSG00000074212.8	ENSMUST00000090178.10	9477	8	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATAAAAGGCTTGTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	137573454	137622315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137573818_137591033_137591206_137598568_137598715_137607947_137608134_137609643_137609739_137610505_137610616_137611645_137611819_137614105
ENSMUSG00000074215.3_0	chr8	-	1531	1	FSM	ENSMUSG00000074215.3	ENSMUST00000098592.3	1577	1	42	4	42	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGACATGGTGGTACAT	NA	NA	NA	NA	NA	NA	NA	NA	84791724	84790193	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84790200_84791700
ENSMUSG00000074217.9_0	chr8	-	1338	3	FSM	ENSMUSG00000074217.9	ENSMUST00000190457.2	1351	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTGCAAGCTATTTTC	NA	NA	NA	NA	NA	NA	NA	NA	84738774	84736850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_84737122_84737339_84737402_84737769
ENSMUSG00000074218.4_0	chr7	+	384	4	FSM	ENSMUSG00000074218.4	ENSMUST00000098594.4	393	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACCCAACCCGGCTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	29883568	29885446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29883671_29884509_29884597_29884699_29884785_29885336
ENSMUSG00000074220.11_0	chr7	+	2092	5	FSM	ENSMUSG00000074220.11	ENSMUST00000098596.11	2117	5	5	20	5	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACTAAATGACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29821371	29834355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29821502_29825192_29825267_29830125_29830253_29830956_29831050_29832687
ENSMUSG00000074220.11_1	chr7	+	1727	4	FSM	ENSMUSG00000074220.11	ENST00000292928.7	1728	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29825204	29834104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29825267_29830097_29830253_29830956_29831050_29832687
ENSMUSG00000074220.11_3	chr7	+	1660	3	ISM	ENSMUSG00000074220.11	ENST00000292928.7	1728	4	4899	0	4899	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTATTTATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29830102	29834104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_29830253_29830956_29831050_29832687
ENSMUSG00000074221.13_0	chr7	+	3997	10	FSM	ENSMUSG00000074221.13	ENSMUST00000148442.8	4005	10	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCAAAAAAGAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	29683380	29724529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29683654_29684684_29684752_29687013_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713264_29713315_29714490_29714615_29716591_29716688_29721642
ENSMUSG00000074221.13_1	chr7	+	6860	9	FSM	ENSMUSG00000074221.13	ENSMUST00000146074.8	6867	9	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGTACGGTCAAGACTCA	NA	NA	NA	NA	NA	NA	NA	NA	29684723	29727700	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29684752_29687006_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ENSMUSG00000074221.13_4	chr7	+	6819	8	FSM	ENSMUSG00000074221.13	ENSMUST00000177931.2	2013	8	-182	-4624	-182	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAAACGTACGGTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	29687015	29727696	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29687232_29688473_29688533_29697174_29697302_29697539_29697636_29713267_29713315_29714490_29714615_29716591_29716688_29721642
ENSMUSG00000074238.7_1	chr3	-	2565	9	FSM	ENSMUSG00000074238.7	ENSMUST00000200409.5	2580	9	2	13	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAATGATATTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127631170	127600668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ENSMUSG00000074238.7_2	chr3	-	2644	10	FSM	ENSMUSG00000074238.7	ENSMUST00000051737.8	2662	10	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTAATGATATTTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	127631150	127600668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_127602403_127605864_127605994_127606182_127606257_127606888_127606945_127609244_127609344_127610558_127610656_127614408_127614435_127616232_127616260_127616913_127616963_127630797
ENSMUSG00000074240.6_0	chr8	-	351	3	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	5554	37	5554	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGACATGCTCAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	72961109	72958258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_72958275_72959406_72959603_72960970
ENSMUSG00000074240.6_1	chr8	-	411	4	FSM	ENSMUSG00000074240.6	ENST00000379859.7	417	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGACATGCTCAGAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	72966818	72958258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_72958275_72959406_72959603_72960970_72961119_72966767
ENSMUSG00000074240.6_2	chr8	-	332	2	ISM	ENSMUSG00000074240.6	ENSMUST00000098630.5	585	5	5557	1185	5557	-1154	internal_fragment	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGTTCAAACCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	72961106	72959406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_72959603_72960970
ENSMUSG00000074240.6_3	chr8	-	395	3	ISM	ENSMUSG00000074240.6	ENST00000379859.7	417	4	0	1154	0	-1154	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAAGTTCAAACCCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	72966818	72959406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_72959603_72960970_72961119_72966767
ENSMUSG00000074247.11_0	chr8	+	1912	5	FSM	ENSMUSG00000074247.11	ENSMUST00000124745.8	1933	5	11	10	5	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACCGCCCATCCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	71921853	71928732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71921970_71924680_71924762_71924838_71924891_71926418_71926481_71927131
ENSMUSG00000074272.11_0	chr7	-	3649	8	FSM	ENSMUSG00000074272.11	ENSMUST00000098666.9	3656	8	2	5	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATAGCACTTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	25177026	25161136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_25163326_25164273_25164306_25165741_25165863_25171222_25171499_25173222_25173478_25173944_25174230_25175768_25176129_25176895
ENSMUSG00000074281.4_0	chr3	-	2406	3	FSM	ENSMUSG00000074281.4	ENSMUST00000142833.2	2439	3	23	10	23	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACAAGCTGCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	108291034	108286602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_108288251_108289786_108290113_108290602
ENSMUSG00000074282.11_0	chr7	-	2576	6	FSM	ENSMUSG00000074282.11	ENSMUST00000108436.8	2599	6	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTGAGAAAGACAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	24016012	24001133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24003299_24008495_24008623_24010889_24010929_24011806_24011921_24013774_24013837_24015943
ENSMUSG00000074282.11_2	chr7	-	2502	5	FSM	ENSMUSG00000074282.11	ENSMUST00000032673.15	2529	5	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAATAGTACATGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	24016074	24001230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_24003299_24008495_24008623_24011806_24011921_24013774_24013837_24015943
ENSMUSG00000074283.6_0	chr7	-	2932	4	FSM	ENSMUSG00000074283.6	ENSMUST00000206362.2	2932	4	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTCTTACATCTTATACT	NA	NA	NA	NA	NA	NA	NA	NA	23936985	23926996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_23929266_23933775_23933903_23936042_23936101_23936507
ENSMUSG00000074305.10_0	chr9	-	7497	4	FSM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	12	15	12	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATACACTAAAAACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	56151337	56108424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56151239
ENSMUSG00000074305.10_1	chr9	-	7402	3	ISM	ENSMUSG00000074305.10	ENSMUST00000188142.7	7524	4	2721	12	2721	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACTAAAAACCAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	56148628	56108421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_56114896_56134385_56135129_56148443
ENSMUSG00000074305.10_3	chr9	-	6989	7	FSM	ENSMUSG00000074305.10	ENSMUST00000061552.15	6996	7	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAGTGAGAACTGCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	56325344	56112412	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_56114896_56134385_56135129_56148443_56148629_56164810_56168047_56225946_56226105_56281659_56281724_56325224
ENSMUSG00000074340.10_0	chr3	+	2606	11	FSM	ENSMUSG00000074340.10	ENSMUST00000000573.9	2616	11	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATGAGAATCTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105881026	105894729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105881157_105881728_105881759_105882154_105882360_105883286_105883344_105884979_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105892368_105892505_105893384
ENSMUSG00000074355.3_0	chr7	-	3214	1	FSM	ENSMUSG00000074355.3	ENSMUST00000098778.3	3221	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAGGAAAAAAAAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	18726692	18723478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18723500_18726700
ENSMUSG00000074358.10_0	chr7	-	2009	14	FSM	ENSMUSG00000074358.10	ENSMUST00000098780.10	2022	14	12	1	12	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCCTAGTGTGTGATTCA	NA	NA	NA	NA	NA	NA	NA	NA	18644328	18624808	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_18625099_18625239_18625313_18625963_18626025_18626198_18626278_18626362_18626509_18626922_18626999_18627109_18627274_18627691_18627775_18627859_18628071_18633482_18633639_18634843_18635002_18637394_18637478_18637706_18637865_18644057
ENSMUSG00000074364.7_0	chr7	-	5089	6	FSM	ENSMUSG00000074364.7	ENSMUST00000098799.5	5119	6	12	18	12	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	502	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAGTTAAAGAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	15701480	15680900	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_15684718_15685990_15686156_15691415_15691829_15697304_15697403_15697831_15698292_15701344
ENSMUSG00000074384.5_0	chr8	+	1914	1	FSM	ENSMUSG00000074384.5	ENSMUST00000098825.5	1930	1	14	2	14	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTAGTTTTGCTTATTCA	NA	NA	NA	NA	NA	NA	NA	NA	37460771	37462685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_37460800_37462700
ENSMUSG00000074397.6_0	chr9	-	479	3	FSM	ENSMUSG00000074397.6	ENST00000317011.8	495	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTCAGGATGAATCAGCC	NA	NA	NA	NA	NA	NA	NA	NA	44346935	44344656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44344678_44345078_44345321_44346719
ENSMUSG00000074397.6_3	chr9	-	467	2	ISM	ENSMUSG00000074397.6	ENST00000317011.8	495	3	8	421	8	-421	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTGTCATGCCTGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	44346938	44345072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_44345321_44346719
ENSMUSG00000074405.9_0	chr7	+	7479	3	FSM	ENSMUSG00000074405.9	ENSMUST00000076251.7	7503	3	13	11	13	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAAATGTTTGCTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5023387	5039756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5023655_5031989_5035207_5035761
ENSMUSG00000074406.6_0	chr7	+	3501	3	FSM	ENSMUSG00000074406.6	ENSMUST00000116354.4	3523	3	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTCTTCCTGGTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	4918231	4924995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4918405_4920408_4920516_4921774
ENSMUSG00000074406.6_1	chr7	+	3033	2	FSM	ENSMUSG00000074406.6	ENST00000391718.3	3042	2	8	1	8	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGACCCCCTCCCCGCAA	NA	NA	NA	NA	NA	NA	NA	NA	4921778	4924895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_4921952_4922035
ENSMUSG00000074415.15_5	chr9	+	1188	3	FSM	ENSMUSG00000074415.15	ENST00000530072.6	1197	3	9	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAGCAGCCACCCACATG	NA	NA	NA	NA	NA	NA	NA	NA	41491281	41501651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_41491495_41491880_41492699_41501494
ENSMUSG00000074417.10_0	chr7	-	888	3	ISM	ENSMUSG00000074417.10	ENST00000396327.7	936	4	187	9	187	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCAGGTGAGGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	3900235	3896987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_3897283_3897541_3897839_3899939
ENSMUSG00000074417.10_1	chr7	-	927	4	FSM	ENSMUSG00000074417.10	ENST00000396327.7	936	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTCAGGTGAGGTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	3900422	3896987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3897283_3897541_3897839_3899939_3900246_3900393
ENSMUSG00000074417.10_3	chr7	-	1089	4	FSM	ENSMUSG00000074417.10	ENST00000245621.6	1106	4	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGGAGCTCAAGACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	3898760	3897050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3897283_3897541_3897857_3898092_3898375_3898500
ENSMUSG00000074457.11_0	chr3	+	1111	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098911.10	1127	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTAACTCTTGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	90444570	90450449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90444725_90449300_90449480_90449671
ENSMUSG00000074457.11_1	chr3	+	737	4	FSM	ENSMUSG00000074457.11	ENST00000368705.2	754	4	14	3	14	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCACAAGATGGGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	90448343	90450011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90448625_90449300_90449480_90449671_90449812_90449874
ENSMUSG00000074457.11_7	chr3	+	1114	3	FSM	ENSMUSG00000074457.11	ENSMUST00000098910.3	1123	3	7	2	7	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTGGCTGCTTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	90448474	90450456	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90448625_90449300_90449480_90449671
ENSMUSG00000074457.11_9	chr3	+	704	3	FSM	ENSMUSG00000074457.11	ENST00000368704.5	718	3	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGCAGTACCAGAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	90449330	90450289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_90449480_90449671_90449812_90449874
ENSMUSG00000074466.13_0	chr3	+	905	2	FSM	ENSMUSG00000074466.13	ENSMUST00000126926.2	925	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATATATATATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	89301606	89306076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89301701_89305265
ENSMUSG00000074466.13_1	chr3	+	821	1	NIC	ENSMUSG00000074466.13	novel	925	2	NA	NA	3667	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATATATATATATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	89305263	89306084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr3_+_89305300_89306100
ENSMUSG00000074476.7_0	chr9	-	1355	5	FSM	ENSMUSG00000074476.7	ENSMUST00000098942.6	1366	5	11	0	-10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTGTGTGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	21671588	21666737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21667592_21668412_21668490_21668585_21668691_21668980_21669126_21671414
ENSMUSG00000074476.7_23	chr9	-	605	4	FSM	ENSMUSG00000074476.7	ENSMUST00000216057.2	627	4	18	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGAGTGCGTTCATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	21671581	21667403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21667592_21668585_21668691_21668980_21669126_21671414
ENSMUSG00000074486.3_0	chr3	-	451	4	FSM	ENSMUSG00000074486.3	ENSMUST00000098956.3	471	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGAGGAAGTGCTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	88285994	88285050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88285310_88285515_88285574_88285716_88285750_88285893
ENSMUSG00000074513.10_0	chr3	-	2951	9	FSM	ENSMUSG00000074513.10	ENST00000451320.6	2968	9	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGGAACTTGAGAGGATG	NA	NA	NA	NA	NA	NA	NA	NA	84489984	84403353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489853
ENSMUSG00000074513.10_11	chr3	-	1314	9	FSM	ENSMUSG00000074513.10	ENSMUST00000143514.3	1343	9	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACAGTAAACTCCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	84489914	84405053	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84436476_84436573_84441893_84442003_84455240_84455343_84489720
ENSMUSG00000074513.10_6	chr3	-	2787	8	FSM	ENSMUSG00000074513.10	ENSMUST00000098990.10	2799	8	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATCCAGTTGCCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	84489833	84403403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_84405199_84417114_84417290_84422939_84423098_84426788_84427011_84434992_84435106_84441893_84442003_84455240_84455343_84489720
ENSMUSG00000074516.7_0	chr9	+	633	1	FSM	ENSMUSG00000074516.7	ENSMUST00000213318.2	480	1	-37	-116	-37	116	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGTTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	7751688	7752321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_7751700_7752300
ENSMUSG00000074521.10_0	chr2	+	1429	3	FSM	ENSMUSG00000074521.10	ENSMUST00000108935.8	1451	3	8	14	8	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGACTCATCAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	177538896	177547563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_177539047_177546077_177546205_177546411
ENSMUSG00000074527.12_0	chr2	-	3808	5	FSM	ENSMUSG00000074527.12	ENSMUST00000099007.3	3823	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAAAAAAAAGGTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	176619592	176605847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_176609305_176610459_176610521_176610725_176610853_176615991_176616047_176619484
ENSMUSG00000074570.15_0	chr2	+	2547	7	FSM	ENSMUSG00000074570.15	ENST00000360314.7	2556	7	4	5	4	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCCTGCGGAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	172235581	172274558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172235673_172235771_172235926_172258039_172258463_172265518_172265621_172266519_172266601_172268555_172269846_172274152
ENSMUSG00000074570.15_11	chr2	+	2457	6	FSM	ENSMUSG00000074570.15	ENSMUST00000228775.2	2629	6	-50	222	30	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCCTGCGGAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	172235770	172274558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172235926_172258039_172258463_172265518_172265621_172266519_172266601_172268555_172269846_172274152
ENSMUSG00000074570.15_14	chr2	+	2127	5	FSM	ENSMUSG00000074570.15	ENST00000679529.1	2138	5	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAGCCTGCGGAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	172258052	172274558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_172258301_172265518_172265621_172266519_172266601_172268555_172269846_172274152
ENSMUSG00000074576.5_0	chr2	+	1960	1	FSM	ENSMUSG00000074576.5	ENSMUST00000099071.5	1973	1	6	7	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGATATTGAGTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	168072547	168074507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_168072500_168074500
ENSMUSG00000074577.10_0	chr2	-	2694	19	FSM	ENSMUSG00000074577.10	ENST00000327979.8	2704	19	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1007	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGCCGTGATCAACGAG	NA	NA	NA	NA	NA	NA	NA	NA	167842359	167822744	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167822841_167823190_167823282_167824698_167824783_167824963_167825167_167825615_167825778_167826364_167826527_167826992_167827129_167827568_167827693_167828392_167828524_167831173_167831726_167833094_167833225_167834469_167834616_167834691_167834818_167834936_167834981_167835257_167835322_167835405_167835556_167836573_167836649_167839163_167839243_167842220
ENSMUSG00000074578.15_0	chr2	+	719	5	FSM	ENSMUSG00000074578.15	ENSMUST00000189909.7	738	5	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATCTGCTGTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	166904865	166907775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166905218_166905555_166905648_166907078_166907138_166907353_166907401_166907606
ENSMUSG00000074579.15_0	chr3	+	510	4	FSM	ENSMUSG00000074579.15	ENST00000483177.5	511	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATAGAGCGCTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	65573675	65595810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_65573733_65576510_65576600_65591312_65591572_65595705
ENSMUSG00000074579.15_1	chr3	+	448	3	ISM	ENSMUSG00000074579.15	ENST00000483177.5	511	4	2841	0	2827	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATAGAGCGCTGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	65576515	65595810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_65576600_65591312_65591572_65595705
ENSMUSG00000074580.12_0	chr3	-	2408	4	FSM	ENSMUSG00000074580.12	ENSMUST00000147424.8	2430	4	22	0	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAAATCATTCTGAACA	NA	NA	NA	NA	NA	NA	NA	NA	65435583	65414677	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65416638_65424059_65424108_65424568_65424806_65435420
ENSMUSG00000074582.11_0	chr2	+	8740	39	FSM	ENSMUSG00000074582.11	ENSMUST00000099078.10	8770	39	20	10	20	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTAAAGCTGCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	166647527	166739962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166647756_166668846_166668878_166669461_166669586_166676390_166676538_166677532_166677713_166678121_166678378_166684604_166684674_166687369_166687522_166690786_166690918_166692962_166693198_166693874_166693975_166695174_166695315_166696824_166696934_166698326_166698511_166701182_166701295_166701705_166701912_166702233_166702319_166702444_166702617_166703503_166703656_166705476_166705606_166706612_166706772_166707599_166707748_166708831_166708932_166709065_166709107_166709207_166709378_166710811_166710964_166712129_166712303_166713378_166713540_166715495_166715627_166715782_166715913_166718412_166718549_166720190_166720330_166720437_166720493_166723091_166723207_166727698_166727830_166732188_166732358_166733686_166733826_166735420_166735539_166736531
ENSMUSG00000074604.10_0	chr3	+	586	5	FSM	ENSMUSG00000074604.10	ENSMUST00000099106.10	603	5	9	8	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTTGTTTTGCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51568608	51590088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589217_51589300_51589874
ENSMUSG00000074604.10_1	chr3	+	486	4	FSM	ENSMUSG00000074604.10	ENSMUST00000159554.7	486	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGCTGTGGCTTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	51568634	51590096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51568728_51571931_51572032_51584985_51585057_51589874
ENSMUSG00000074604.10_2	chr3	+	469	4	FSM	ENSMUSG00000074604.10	ENSMUST00000161590.4	481	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTTTAAAACTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	51568645	51590079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51568728_51571931_51572032_51589217_51589300_51589874
ENSMUSG00000074607.12_0	chr2	+	2230	8	FSM	ENSMUSG00000074607.12	ENST00000358131.5	2243	8	9	4	9	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	1252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGCAACTGTCAAGGTGA	NA	NA	NA	NA	NA	NA	NA	NA	163067197	163165282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163067508_163089686_163089753_163117888_163118135_163156241_163156482_163157714_163157943_163162217_163162611_163163340_163163469_163164663
ENSMUSG00000074629.4_0	chr2	-	1578	1	FSM	ENSMUSG00000074629.4	ENSMUST00000238678.2	1597	1	5	14	5	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATGAAATAAATCTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156700127	156698549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156698500_156700100
ENSMUSG00000074634.13_0	chr13	+	1629	2	FSM	ENSMUSG00000074634.13	ENSMUST00000178948.2	1648	2	-3	22	-3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATAAAGTCGTTTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	120068182	120071972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_120068567_120070727
ENSMUSG00000074635.4_0	chr13	-	1120	1	FSM	ENSMUSG00000074635.4	ENSMUST00000238285.2	1133	1	6	7	6	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCCGGGTCTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	119624914	119623794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_119623800_119624900
ENSMUSG00000074643.13_0	chr2	-	3423	16	FSM	ENSMUSG00000074643.13	ENSMUST00000109607.10	3441	16	13	5	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCCTCAGTGGCCGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	155953846	155913769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155953705
ENSMUSG00000074643.13_1	chr2	-	3477	17	FSM	ENSMUSG00000074643.13	ENSMUST00000109608.9	3492	17	8	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCTCCTCAGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	155953855	155913773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155945268_155945318_155953705
ENSMUSG00000074643.13_4	chr2	-	1918	18	FSM	ENSMUSG00000074643.13	ENST00000352393.8	1940	18	19	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTAGGCTCCAATCAGT	NA	NA	NA	NA	NA	NA	NA	NA	155953810	155915430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920154_155920251_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155940149_155940293_155945268_155945318_155953705
ENSMUSG00000074649.7_0	chr2	-	1596	2	FSM	ENSMUSG00000074649.7	ENSMUST00000124586.2	1615	2	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	947	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATAAAACGCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	155661338	155659660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155661004_155661085
ENSMUSG00000074652.4_0	chr2	+	6150	42	FSM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCTCCATTTAATCGG	NA	NA	NA	NA	NA	NA	NA	NA	155453137	155476220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155453182_155453506_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155457320_155457418_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ENSMUSG00000074652.4_2	chr2	+	6095	41	ISM	ENSMUSG00000074652.4	ENSMUST00000092995.6	6163	42	386	7	386	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGTCTCCATTTAATCGG	NA	NA	NA	NA	NA	NA	NA	NA	155453517	155476220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_155453669_155455067_155455175_155455352_155455497_155455958_155456116_155456387_155456416_155457320_155457418_155459443_155459468_155459567_155459661_155459781_155459846_155460653_155460753_155462009_155462114_155462306_155462446_155462700_155462820_155462911_155463062_155463185_155463357_155464087_155464268_155464353_155464487_155464564_155464642_155465122_155465211_155465363_155465482_155467559_155467684_155467770_155467908_155468256_155468513_155469491_155469735_155470412_155470590_155470673_155470820_155471038_155471130_155471210_155471601_155472177_155472305_155472394_155472514_155472600_155472798_155472930_155473281_155473398_155473524_155473633_155473750_155474067_155474465_155474546_155474673_155474767_155474939_155475084_155475190_155475272_155475369_155475782_155475921_155475999
ENSMUSG00000074653.11_0	chr3	-	1336	7	FSM	ENSMUSG00000074653.11	ENST00000523069.1	1347	7	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGTGCTGCTTTGTAAACA	NA	NA	NA	NA	NA	NA	NA	NA	30745456	30733205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_30733551_30735094_30735263_30739007_30739176_30741563_30741732_30743287_30743456_30743998_30744167_30745305
ENSMUSG00000074656.13_0	chr2	-	2525	9	FSM	ENSMUSG00000074656.13	ENSMUST00000099173.11	2542	9	9	8	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	154734846	154713337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074656.13_9	chr2	-	2307	10	FSM	ENSMUSG00000074656.13	ENSMUST00000166171.8	2312	10	5	0	5	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCTCCATTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	154734697	154713337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_154714091_154714159_154714821_154715468_154715555_154718535_154718593_154719590_154719740_154720389_154720485_154726230_154726367_154729623_154729728_154730102_154730281_154734609
ENSMUSG00000074657.6_0	chr10	-	3448	26	FSM	ENSMUSG00000074657.6	ENST00000286452.5	3468	26	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACACACAGTGTACATACA	NA	NA	NA	NA	NA	NA	NA	NA	127098962	127063889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127064291_127065613_127065726_127066017_127066046_127066437_127066506_127066792_127066947_127067160_127067378_127069685_127069791_127069915_127069988_127071485_127071547_127071922_127072025_127072589_127072700_127072800_127072866_127073165_127073284_127073585_127073775_127074613_127074761_127075042_127075250_127075697_127075767_127077799_127077976_127078526_127078676_127079228_127079378_127079516_127079622_127081218_127081344_127081573_127081662_127081815_127081872_127082900_127082950_127098636
ENSMUSG00000074673.16_0	chr2	+	787	8	FSM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACACTCACCTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	152818075	152844926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152818164_152833497_152833589_152835088_152835130_152835983_152836072_152841218_152841278_152842020_152842218_152844163_152844278_152844817
ENSMUSG00000074673.16_1	chr2	+	699	7	ISM	ENSMUSG00000074673.16	ENST00000620043.4	801	8	15428	8	15428	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAACACTCACCTAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	152833497	152844926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_152833589_152835088_152835130_152835983_152836072_152841218_152841278_152842020_152842218_152844163_152844278_152844817
ENSMUSG00000074676.3_0	chr2	-	1301	1	FSM	ENSMUSG00000074676.3	ENSMUST00000099200.3	1311	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	374	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGGGTCCGCCTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	152775118	152773817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152773800_152775100
ENSMUSG00000074678.2_0	chr2	-	283	2	FSM	ENSMUSG00000074678.2	ENSMUST00000099203.2	293	2	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTCTCCCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	152464969	152464281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_152464485_152464889
ENSMUSG00000074678.2_1	chr2	-	205	1	NIC	ENSMUSG00000074678.2	novel	293	2	NA	NA	487	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCAGCTCTCCCTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	152464486	152464281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_152464300_152464500
ENSMUSG00000074698.11_0	chr2	+	4182	13	FSM	ENSMUSG00000074698.11	ENSMUST00000099224.10	4206	13	12	12	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATGAAATGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	152068770	152123760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152068912_152092321_152092532_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074698.11_6	chr2	+	3941	12	FSM	ENSMUSG00000074698.11	ENST00000349736.10	3961	12	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAATGAAATGTCCATG	NA	NA	NA	NA	NA	NA	NA	NA	152068801	152123760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_152068912_152096129_152096242_152099297_152099400_152099860_152099912_152100595_152100656_152102678_152102763_152105102_152105214_152114547_152114650_152116012_152116114_152117317_152117467_152118866_152118954_152120888
ENSMUSG00000074704.10_0	chr2	-	1841	13	FSM	ENSMUSG00000074704.10	ENST00000683101.1	1861	13	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTATGTGGAGACAGGT	NA	NA	NA	NA	NA	NA	NA	NA	151510468	151487157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_151487513_151490995_151491074_151493807_151493895_151495379_151495496_151496509_151496620_151497032_151497260_151499346_151499461_151500278_151500372_151502562_151502734_151506269_151506377_151508248_151508343_151509825_151509956_151510309
ENSMUSG00000074733.15_0	chr19	-	2557	4	FSM	ENSMUSG00000074733.15	ENSMUST00000180544.3	2568	4	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATATCAGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	61129196	61106575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_61108891_61115444_61115506_61115875_61116003_61129142
ENSMUSG00000074733.15_1	chr19	-	2486	3	ISM	ENSMUSG00000074733.15	ENSMUST00000180544.3	2568	4	13215	7	17	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGATATCAGTGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	61115985	61106575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_61108891_61115444_61115506_61115875
ENSMUSG00000074738.3_0	chr4	+	2120	1	FSM	ENSMUSG00000074738.3	ENSMUST00000099265.3	2140	1	15	5	15	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAAAACCACTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	155778813	155780933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155778800_155780900
ENSMUSG00000074743.5_0	chr2	-	3709	1	FSM	ENSMUSG00000074743.5	ENSMUST00000099270.5	3723	1	9	5	9	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGATGTCTCATCTCCTTC	NA	NA	NA	NA	NA	NA	NA	NA	148250099	148246390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_148246400_148250100
ENSMUSG00000074746.4_0	chr19	-	5971	5	FSM	ENSMUSG00000074746.4	ENSMUST00000099274.4	5982	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCACGGAAAATAAGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	59334212	59285620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_59290141_59293589_59293753_59303689_59303793_59316182_59316306_59333150
ENSMUSG00000074748.4_0	chr10	-	3535	1	FSM	ENSMUSG00000074748.4	ENSMUST00000099276.4	3566	1	13	18	13	-18	mono-exon	FALSE	NA	NA	NA	NA	NA	1054	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAATTTAAAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	112764887	112761352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_112761400_112764900
ENSMUSG00000074749.11_0	chr2	+	2166	14	FSM	ENSMUSG00000074749.11	ENSMUST00000099278.9	2183	14	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAAGCGTCACTGTAA	NA	NA	NA	NA	NA	NA	NA	NA	146697792	146812009	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_146697964_146703039_146703103_146705626_146705790_146712685_146712767_146730940_146731587_146732900_146733205_146777722_146777805_146783929_146784096_146784836_146784900_146792442_146792509_146794897_146794985_146798119_146798217_146811463_146811508_146811876
ENSMUSG00000074754.5_0	chr2	+	455	2	FSM	ENSMUSG00000074754.5	ENSMUST00000136628.2	471	2	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATGTGCAACCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	144435980	144437277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144436126_144436967
ENSMUSG00000074764.12_0	chr2	-	1866	18	FSM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTGTCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	140182059	140072689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_140072816_140082818_140082992_140085833_140085909_140086019_140086186_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104588_140104644_140105288_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320_140117484_140127123_140127227_140146528_140146698_140182021
ENSMUSG00000074764.12_1	chr2	-	1823	17	ISM	ENSMUSG00000074764.12	ENST00000284951.10	1869	18	35367	3	35367	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTGTCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	140146692	140072689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_140072816_140082818_140082992_140085833_140085909_140086019_140086186_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104588_140104644_140105288_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320_140117484_140127123_140127227_140146528
ENSMUSG00000074764.12_2	chr2	-	1478	15	ISM	ENSMUSG00000074764.12	ENST00000378072.5	1530	16	35373	3	35373	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTGTCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	140146686	140072689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_140072816_140085833_140085909_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104588_140104644_140105288_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320_140117484_140127123_140127227_140146528
ENSMUSG00000074764.12_3	chr2	-	1527	16	FSM	ENSMUSG00000074764.12	ENST00000378072.5	1530	16	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAGTTTGTCTCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	140182059	140072689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_140072816_140085833_140085909_140087265_140087415_140089856_140089945_140090473_140090537_140097199_140097278_140098891_140098961_140104588_140104644_140105288_140105444_140107617_140107700_140107785_140107846_140108279_140108334_140117320_140117484_140127123_140127227_140146528_140146698_140182021
ENSMUSG00000074781.6_0	chr10	+	3856	4	FSM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGTGATGATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95351012	95381514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_95351100_95377066_95377314_95377499_95377641_95378133
ENSMUSG00000074781.6_3	chr10	+	3771	3	ISM	ENSMUSG00000074781.6	ENSMUST00000099329.5	3867	4	26058	5	26058	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGATGTGATGATTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	95377064	95381514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_95377314_95377499_95377641_95378133
ENSMUSG00000074785.6_0	chr10	-	1745	12	FSM	ENSMUSG00000074785.6	ENST00000545312.1	1764	12	11	8	11	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	1384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCACAATGATATCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	94665478	94628740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_94629153_94630277_94630353_94630447_94630589_94632231_94632380_94633845_94634010_94635132_94635241_94635335_94635368_94637322_94637378_94646526_94646631_94648984_94649163_94663032_94663180_94665297
ENSMUSG00000074793.11_0	chr2	+	3410	13	FSM	ENSMUSG00000074793.11	ENSMUST00000099349.10	3413	13	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTACCGGAGTTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	130969199	130988238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130969435_130975982_130976043_130977714_130977813_130978859_130978985_130980348_130980536_130980900_130981006_130981324_130981442_130982818_130982994_130983751_130983839_130984569_130984675_130984772_130985032_130985541_130985646_130986485
ENSMUSG00000074794.11_0	chr13	+	4089	8	FSM	ENSMUSG00000074794.11	ENSMUST00000099356.10	4101	8	8	4	8	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGTTTGGCAGTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	81031536	81044157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_81032049_81035524_81035607_81037207_81037356_81038214_81038318_81038652_81038910_81039180_81039344_81039606_81039762_81041488
ENSMUSG00000074796.11_0	chr2	-	3192	21	FSM	ENSMUSG00000074796.11	ENSMUST00000099362.11	3196	21	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCAGTCGCCCTCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	130539436	130526033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533701_130533948_130533999_130534085_130534251_130537960_130538024_130538567_130538676_130539278
ENSMUSG00000074796.11_1	chr2	-	2802	17	FSM	ENSMUSG00000074796.11	ENST00000642402.1	2810	17	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTTTCACATGCAGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	130534204	130526041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533733_130534074
ENSMUSG00000074796.11_5	chr2	-	2638	17	FSM	ENSMUSG00000074796.11	ENST00000644692.1	2653	17	5	10	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATAAAAGTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	130534206	130526063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130526424_130526531_130526630_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529290_130529405_130529482_130529609_130529706_130529801_130529873_130530006_130532752_130532877_130533309_130533392_130533468_130533733_130534074
ENSMUSG00000074796.11_6	chr2	-	2653	16	FSM	ENSMUSG00000074796.11	ENST00000647296.1	2682	16	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATAAAAGTCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	130534191	130526063	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130526424_130526531_130526702_130526777_130526974_130527150_130527325_130527414_130527584_130527668_130527776_130527950_130528210_130528803_130528878_130529078_130529212_130529482_130529609_130529706_130529801_130529873_130530078_130532752_130532877_130533309_130533392_130533468_130533733_130534074
ENSMUSG00000074797.12_0	chr2	+	1380	8	FSM	ENSMUSG00000074797.12	ENSMUST00000103193.5	1390	8	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTGTCTGTCTTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	130509538	130523533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_130509856_130513320_130513379_130513475_130513541_130513979_130514054_130516158_130516191_130517548_130517665_130521254_130521332_130522892
ENSMUSG00000074800.5_0	chr13	+	225	1	FSM	ENSMUSG00000074800.5	ENSMUST00000099371.5	276	1	42	9	42	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACCAGTAGAAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	75793056	75793281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_75793100_75793300
ENSMUSG00000074802.12_0	chr10	-	6735	11	FSM	ENSMUSG00000074802.12	ENSMUST00000099374.9	6748	11	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTATGTTTGCCTAAC	NA	NA	NA	NA	NA	NA	NA	NA	89279823	89244691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270151_89270224_89272364_89272472_89279716
ENSMUSG00000074802.12_3	chr10	-	6287	11	FSM	ENSMUSG00000074802.12	ENSMUST00000105298.3	6305	11	10	8	-3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAACCCACTCTGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	89279819	89245132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89270154_89270224_89272364_89272472_89279716
ENSMUSG00000074802.12_5	chr10	-	2148	9	FSM	ENSMUSG00000074802.12	ENST00000266754.9	2164	9	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATAAATACACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	89279797	89249073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626_89269675_89279716
ENSMUSG00000074802.12_6	chr10	-	2068	8	ISM	ENSMUSG00000074802.12	ENST00000266754.9	2164	9	10129	9	10129	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAATAAATACACTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	89269675	89249073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_89250355_89252881_89252990_89257318_89257458_89258076_89258141_89262269_89262412_89264891_89265008_89266745_89266915_89269626
ENSMUSG00000074811.4_0	chr19	+	2652	1	FSM	ENSMUSG00000074811.4	ENSMUST00000099393.4	2666	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTTCTTGTGCGTGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	45991954	45994606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45992000_45994600
ENSMUSG00000074813.15_0	chr2	-	3292	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239198.2	3309	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	128271777	128140593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128142917_128172764_128172970_128271013
ENSMUSG00000074813.15_1	chr2	-	1983	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239221.2	1999	3	14	2	-11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGACAGTTTTTCCAG	NA	NA	NA	NA	NA	NA	NA	NA	128271297	128158098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128159593_128172764_128172970_128271013
ENSMUSG00000074813.15_3	chr2	-	1785	3	FSM	ENSMUSG00000074813.15	ENSMUST00000239275.2	1797	3	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAACCCACGTGGTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	128175782	128158222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128159593_128172764_128172970_128175572
ENSMUSG00000074813.15_5	chr2	-	1074	2	FSM	ENSMUSG00000074813.15	ENSMUST00000239199.2	1105	2	15	16	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAGAAAATGCAATTGT	NA	NA	NA	NA	NA	NA	NA	NA	128271776	128214036	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_128214348_128271013
ENSMUSG00000074818.14_0	chr19	-	1931	11	FSM	ENSMUSG00000074818.14	ENST00000644782.1	1946	11	10	5	10	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1434	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGGAACAGGGAGAACA	NA	NA	NA	NA	NA	NA	NA	NA	45034190	45018133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_45018251_45018418_45018511_45018636_45018729_45024495_45024694_45025169_45025566_45025977_45026039_45027605_45027754_45028011_45028189_45028599_45028775_45029001_45029143_45033856
ENSMUSG00000074825.5_0	chr2	-	3411	3	FSM	ENSMUSG00000074825.5	ENSMUST00000132773.2	3424	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAACTGGAATCTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	126985349	126980691	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126983647_126983893_126984135_126985134
ENSMUSG00000074825.5_3	chr2	-	1844	2	FSM	ENSMUSG00000074825.5	ENST00000439118.3	1852	2	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTCAGGCTGCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	126985201	126982433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_126984211_126985134
ENSMUSG00000074825.5_4	chr2	-	1774	1	NIC	ENSMUSG00000074825.5	novel	3424	3	NA	NA	303	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTCAGGCTGCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	126984207	126982433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_126982400_126984200
ENSMUSG00000074826.11_0	chr13	+	2035	3	FSM	ENSMUSG00000074826.11	ENSMUST00000168767.9	2067	3	15	17	15	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGCAACTTAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	67052992	67057283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67053407_67055214_67055374_67055821
ENSMUSG00000074826.11_1	chr13	+	1631	3	FSM	ENSMUSG00000074826.11	ENSMUST00000099412.3	1652	3	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATTATGTGTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	67053497	67057228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67053686_67055214_67055374_67055944
ENSMUSG00000074829.11_0	chr9	-	2606	4	FSM	ENSMUSG00000074829.11	ENSMUST00000177714.8	2623	4	5	12	5	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAATGATATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	124075321	124054445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_124056732_124057727_124057789_124057987_124058115_124075189
ENSMUSG00000074829.11_1	chr9	-	2597	4	NNC	ENSMUSG00000074829.11	novel	2623	4	NA	NA	13	-12	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAATGATATACTAT	NA	NA	NA	NA	NA	NA	NA	NA	124075313	124054445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_124056732_124057727_124057788_124057987_124058115_124075189
ENSMUSG00000074832.12_5	chr13	-	355	2	FSM	ENSMUSG00000074832.12	ENST00000244576.9	374	2	14	5	14	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTTTTCCTGTCACAA	NA	NA	NA	NA	NA	NA	NA	NA	66579754	66579230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_66579385_66579553
ENSMUSG00000074852.5_0	chr19	-	2270	10	FSM	ENSMUSG00000074852.5	ENST00000404542.5	2280	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCAGGAGAGGGACTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	43001665	42776195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_42776237_42776333_42777552_42794728_42794876_42801318_42801465_42897057_42897173_42901535_42901643_42919999_42920094_42955391_42955440_42979548_42979721_43001483
ENSMUSG00000074863.6_0	chr13	-	2440	4	FSM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTGACCTGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	62832750	62819606	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62821755_62823062_62823124_62823332_62823460_62832646
ENSMUSG00000074863.6_1	chr13	-	2344	3	ISM	ENSMUSG00000074863.6	ENSMUST00000221996.2	2458	4	9300	1	9300	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGGTTCCTGGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62823459	62819598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_62821755_62823062_62823124_62823332
ENSMUSG00000074865.12_0	chr13	-	2204	3	FSM	ENSMUSG00000074865.12	ENSMUST00000222746.2	2206	3	0	2	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62706443	62664610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62666545_62668231_62668359_62706300
ENSMUSG00000074865.12_1	chr13	-	2116	3	ISM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	37973	0	-87	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62668352	62664610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_62666545_62667985_62668047_62668231
ENSMUSG00000074865.12_2	chr13	-	2147	4	FSM	ENSMUSG00000074865.12	ENSMUST00000101547.12	2147	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTGTGTGGACCAGT	NA	NA	NA	NA	NA	NA	NA	NA	62706325	62664610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62706300
ENSMUSG00000074865.12_3	chr13	-	2438	5	FSM	ENSMUSG00000074865.12	ENSMUST00000220648.2	2439	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTTGTGTGTGGACCAG	NA	NA	NA	NA	NA	NA	NA	NA	62706413	62664611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62666545_62667985_62668047_62668231_62668359_62682424_62682629_62706300
ENSMUSG00000074867.5_0	chr13	+	2555	4	FSM	ENSMUSG00000074867.5	ENSMUST00000099449.4	2571	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTTCAAAAAATAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	62277739	62321227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_62277843_62317255_62317383_62317567_62317629_62318963
ENSMUSG00000074874.11_0	chr13	-	803	5	FSM	ENSMUSG00000074874.11	ENSMUST00000021884.10	842	5	33	6	-9	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGCTTCTTTCTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	61045228	61043174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_61043534_61043834_61043958_61044051_61044175_61044441_61044560_61045148
ENSMUSG00000074884.13_0	chr2	+	721	3	FSM	ENSMUSG00000074884.13	ENST00000630046.2	734	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGAACTGGGCAGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	121279513	121286259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121279923_121280455_121280565_121286056
ENSMUSG00000074884.13_1	chr2	+	3040	3	FSM	ENSMUSG00000074884.13	ENSMUST00000139253.8	3056	3	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGACATTCTTCAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	121279685	121283895	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121279923_121280455_121280565_121281201
ENSMUSG00000074884.13_10	chr2	+	425	2	FSM	ENSMUSG00000027245.12	ENST00000458412.2	440	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGATAATGTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121287594	121288719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121287773_121288472
ENSMUSG00000074884.13_3	chr2	+	523	3	FSM	ENSMUSG00000074884.13	ENSMUST00000099475.12	525	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCCTTGAGCGCCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	121279863	121281533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121279923_121280455_121280565_121281178
ENSMUSG00000074884.13_9	chr2	+	948	4	FSM	ENSMUSG00000027245.12	ENSMUST00000126764.2	961	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTTTTCCCCTTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	121287453	121289150	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_121287773_121288126_121288183_121288472_121288525_121288629
ENSMUSG00000074886.12_0	chr13	+	2979	16	FSM	ENSMUSG00000074886.12	ENSMUST00000001115.16	2994	16	10	5	2	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTGCCTGCCTCCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55593160	55608735	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607594
ENSMUSG00000074886.12_1	chr13	+	2983	16	FSM	ENSMUSG00000074886.12	ENSMUST00000224118.2	1997	16	-123	-863	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCACTGCCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55593150	55608731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55599947_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ENSMUSG00000074886.12_3	chr13	+	2753	16	FSM	ENSMUSG00000074886.12	ENSMUST00000225925.2	2769	16	9	7	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCACCACTGCCTGCCTCC	NA	NA	NA	NA	NA	NA	NA	NA	55593278	55608731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55593374_55597120_55597217_55598077_55598191_55598319_55598398_55598740_55598842_55599141_55599235_55599332_55599397_55599515_55599657_55600049_55600139_55600859_55600898_55600984_55601075_55602129_55602339_55602418_55602557_55606605_55606744_55606825_55606961_55607596
ENSMUSG00000074890.5_0	chr2	-	3049	1	FSM	ENSMUSG00000074890.5	ENSMUST00000110674.4	3056	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	247	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTTTTAGGAGTTGTTCC	NA	NA	NA	NA	NA	NA	NA	NA	120971127	120968078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120968100_120971100
ENSMUSG00000074909.6_0	chr19	-	4565	1	FSM	ENSMUSG00000074909.6	ENSMUST00000099525.5	4575	1	4	6	4	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTGATTGTCCTTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	29790370	29785805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_29785800_29790400
ENSMUSG00000074916.6_0	chr2	+	2074	1	FSM	ENSMUSG00000074916.6	ENSMUST00000099546.6	2090	1	6	10	6	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	731	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACAAAATGAGCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	118756982	118759056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118757000_118759100
ENSMUSG00000074916.6_1	chr2	+	1980	2	FSM	ENSMUSG00000074916.6	ENSMUST00000110837.2	1991	2	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATACAAAATGAGCAACTC	NA	NA	NA	NA	NA	NA	NA	NA	118757001	118759056	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118757559_118757633
ENSMUSG00000074918.5_0	chr2	+	3044	1	FSM	ENSMUSG00000074918.5	ENSMUST00000149978.2	3053	1	7	2	7	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGTGTAAGTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	118576245	118579289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118576200_118579300
ENSMUSG00000074922.2_0	chr19	-	843	1	FSM	ENSMUSG00000074922.2	ENSMUST00000099556.2	855	1	5	7	5	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCACTCATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	24454715	24453872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_24453900_24454700
ENSMUSG00000074923.11_2	chr2	+	2436	9	FSM	ENSMUSG00000074923.11	ENST00000542403.3	2457	9	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTTCGAACCTTTGGGT	NA	NA	NA	NA	NA	NA	NA	NA	118519288	118528490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_118519487_118520214_118520872_118523707_118524206_118524347_118524482_118524774_118524902_118524995_118525122_118525687_118525823_118526887_118527069_118528110
ENSMUSG00000074925.5_0	chr19	+	12546	7	FSM	ENSMUSG00000074925.5	ENSMUST00000237333.2	12574	7	22	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCCTTTAAGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	23664814	23709026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_23664910_23671684_23671855_23680441_23680509_23683070_23683176_23686117_23686332_23695176_23695467_23697421
ENSMUSG00000074934.4_0	chr2	-	4138	2	FSM	ENSMUSG00000074934.4	ENSMUST00000099575.4	4148	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCGTGACTGAACTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	113588981	113576508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113580501_113588835
ENSMUSG00000074965.6_0	chr2	-	5944	2	FSM	ENSMUSG00000074965.6	ENSMUST00000214760.2	5944	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGTGAGGTGGATTT	NA	NA	NA	NA	NA	NA	NA	NA	111104451	111095290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_111100758_111103974
ENSMUSG00000074971.5_0	chr2	-	2241	1	FSM	ENSMUSG00000074971.5	ENSMUST00000099626.5	2267	1	18	8	18	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCATTTTATTTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	110193510	110191269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_110191300_110193500
ENSMUSG00000074994.7_0	chr2	-	8965	12	FSM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATCAGAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104647041	104585147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532_104625640_104646944
ENSMUSG00000074994.7_1	chr2	-	8870	11	ISM	ENSMUSG00000074994.7	ENSMUST00000117237.2	8973	12	21400	8	21400	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAATCAGAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104625641	104585147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_104588951_104590838_104590935_104593155_104593309_104596303_104596402_104600387_104600526_104606516_104606735_104607663_104607798_104608481_104608599_104610279_104610606_104616864_104620543_104625532
ENSMUSG00000075000.12_0	chr10	-	1603	3	FSM	ENSMUSG00000075000.12	ENST00000435510.6	1613	3	4	6	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	67120960	67102468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67103946_67105884_67105926_67120875
ENSMUSG00000075000.12_1	chr10	-	1518	2	ISM	ENSMUSG00000075000.12	ENST00000435510.6	1613	3	15039	6	15034	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTGTTGAGTATGACTT	NA	NA	NA	NA	NA	NA	NA	NA	67105925	67102468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_67103946_67105884
ENSMUSG00000075000.12_2	chr10	-	1798	4	FSM	ENSMUSG00000075000.12	ENSMUST00000077839.13	1813	4	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTTGTTGAGTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	67121072	67102470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_67103946_67105884_67105926_67111348_67111434_67120875
ENSMUSG00000075014.2_1	chr2	-	655	3	ISM	ENSMUSG00000075014.2	ENSMUST00000099683.2	660	5	10	0	10	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	961	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGGTACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	98497636	98496891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_98497015_98497079_98497386_98497410
ENSMUSG00000075014.2_3	chr2	-	673	2	ISM	ENSMUSG00000075014.2	ENSMUST00000099683.2	660	5	17	0	17	0	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGTAGGTACACACACAA	NA	NA	NA	NA	NA	NA	NA	NA	98497629	98496891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_98497015_98497079
ENSMUSG00000075023.12_0	chr2	-	974	9	FSM	ENSMUSG00000075023.12	ENST00000378832.1	979	9	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCCACCTTCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	93693512	93687067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689784_93691357_93691463_93692024_93692217_93693135_93693203_93693444
ENSMUSG00000075023.12_1	chr2	-	902	8	ISM	ENSMUSG00000075023.12	ENST00000378832.1	979	9	316	3	316	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACCCACCTTCACCTAC	NA	NA	NA	NA	NA	NA	NA	NA	93693198	93687067	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_93687196_93687289_93687433_93688239_93688382_93688481_93688528_93689700_93689784_93691357_93691463_93692024_93692217_93693135
ENSMUSG00000075027.11_0	chr2	+	2864	5	FSM	ENSMUSG00000075027.11	ENSMUST00000111270.8	2909	5	37	8	37	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTAACCTCCATGTCTATC	NA	NA	NA	NA	NA	NA	NA	NA	92858337	92863749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92859993_92860482_92860520_92860739_92861301_92861810_92862027_92863354
ENSMUSG00000075033.5_0	chr16	-	2462	5	FSM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTGCTCACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55715353	55663710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158_55686914_55715306
ENSMUSG00000075033.5_1	chr16	-	2408	4	ISM	ENSMUSG00000075033.5	ENST00000491511.6	2471	5	28447	9	28447	-9	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATGCTGCTCACTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	55686906	55663710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_55665090_55669974_55670182_55680668_55680743_55686158
ENSMUSG00000075040.10_0	chr2	-	3443	5	FSM	ENSMUSG00000075040.10	ENSMUST00000099714.10	3469	5	2	24	2	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAAAAAAAAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	91480122	91474037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495_91479771_91480048
ENSMUSG00000075040.10_1	chr2	-	3702	4	FSM	ENSMUSG00000075040.10	ENSMUST00000111333.2	3740	4	31	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCTTAAAAAAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	91480105	91474039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_91476819_91477940_91478192_91478360_91478423_91479495
ENSMUSG00000075054.6_0	chr13	-	8728	3	FSM	ENSMUSG00000075054.6	ENSMUST00000099735.6	8744	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTAGAAATCGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18167926	18155922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_18164368_18166212_18166335_18167765
ENSMUSG00000075054.6_3	chr13	-	315	3	FSM	ENSMUSG00000075054.6	ENST00000448268.5	326	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCGTCAGACCAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	18167852	18164184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_18164291_18166212_18166335_18167765
ENSMUSG00000075081.7_0	chr2	-	6054	3	FSM	ENSMUSG00000075081.7	ENSMUST00000111532.4	6070	3	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGCTTCTGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	89444447	89435302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_89440630_89441904_89442103_89443918
ENSMUSG00000075102.3_0	chr2	-	2769	4	FSM	ENSMUSG00000075102.3	ENSMUST00000213404.2	2778	4	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAAGAATATTAACAATT	NA	NA	NA	NA	NA	NA	NA	NA	88947624	88940476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_88942895_88944702_88944780_88946255_88946322_88947416
ENSMUSG00000075122.6_0	chr16	+	3151	7	FSM	ENSMUSG00000075122.6	ENSMUST00000231716.2	3173	7	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAATGGATATTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	38275933	38316686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38276075_38279338_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665_38306810_38314847
ENSMUSG00000075122.6_3	chr16	+	1695	5	FSM	ENSMUSG00000075122.6	ENSMUST00000099816.3	1701	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAATGATGGGGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	38279294	38307289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_38279652_38294227_38294546_38299425_38299708_38302981_38303096_38306665
ENSMUSG00000075144.6_0	chr2	-	3276	2	FSM	ENSMUSG00000075144.6	ENSMUST00000216191.2	3300	2	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAAGACAATGAATATC	NA	NA	NA	NA	NA	NA	NA	NA	87783427	87777403	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_87780617_87783364
ENSMUSG00000075144.6_1	chr2	-	3204	1	FSM	ENSMUSG00000075144.6	ENSMUST00000099842.6	1076	1	6	-2134	6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACAATGAATATCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	87780603	87777399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_87777400_87780600
ENSMUSG00000075227.7_0	chr19	+	1268	1	FSM	ENSMUSG00000075227.7	ENSMUST00000162726.5	1281	1	11	2	11	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	978	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCAGCAGTGCCTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	6111232	6112500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6111200_6112500
ENSMUSG00000075229.12_0	chr16	+	1064	5	FSM	ENSMUSG00000075229.12	ENSMUST00000164916.9	1073	5	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATTTATTTGGTGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35892062	35912489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35892508_35903060_35903187_35905386_35905534_35910270_35910331_35912203
ENSMUSG00000075229.12_1	chr16	+	385	3	FSM	ENSMUSG00000075229.12	ENSMUST00000231468.2	392	3	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	35892459	35912480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_35892508_35910270_35910331_35912203
ENSMUSG00000075229.12_2	chr16	+	322	2	ISM	ENSMUSG00000075229.12	ENSMUST00000099937.6	740	5	8641	1	8641	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGTGTACATATTTATT	NA	NA	NA	NA	NA	NA	NA	NA	35910285	35912480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_35910331_35912203
ENSMUSG00000075232.7_0	chr10	-	3187	8	FSM	ENSMUSG00000075232.7	ENSMUST00000099945.6	3204	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGAGAAAGTTTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	40178173	40163461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40165466_40166113_40166270_40166373_40166612_40167989_40168033_40169159_40169263_40170176_40170304_40170712_40170800_40177744
ENSMUSG00000075249.13_0	chr2	+	3260	4	FSM	ENSMUSG00000075249.13	ENST00000611759.1	3275	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1948	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCTGGGTATATAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	82821570	82830189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_82822932_82823051_82824372_82828307_82828803_82830105
ENSMUSG00000075254.13_0	chr16	+	8138	15	FSM	ENSMUSG00000075254.13	ENSMUST00000152782.8	8161	15	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACAAGCAAACGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	33504846	33591934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33505226_33530769_33531070_33545794_33546014_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ENSMUSG00000075254.13_2	chr16	+	6704	17	FSM	ENSMUSG00000075254.13	ENSMUST00000126532.2	6714	17	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGGGCCTGGCTCTATG	NA	NA	NA	NA	NA	NA	NA	NA	33504918	33589807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_33505226_33527285_33527577_33530769_33531070_33539876_33540216_33541018_33541373_33546670_33547967_33550846_33550964_33551968_33552089_33555910_33556015_33558594_33558654_33558932_33559094_33562731_33562867_33570821_33570865_33571541_33571580_33581127_33581216_33583811_33583987_33587030
ENSMUSG00000075256.10_0	chr2	-	1502	11	FSM	ENSMUSG00000075256.10	ENST00000410087.8	1520	11	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAGATATATACAAATA	NA	NA	NA	NA	NA	NA	NA	NA	79259142	79162877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_79163001_79163822_79164002_79168884_79168982_79171636_79171746_79172578_79172825_79173560_79173636_79185265_79185409_79191667_79191732_79199023_79199156_79223286_79223520_79259041
ENSMUSG00000075256.10_5	chr2	-	1036	7	FSM	ENSMUSG00000075256.10	ENST00000374969.6	1054	7	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGGTAAGCCCAACTA	NA	NA	NA	NA	NA	NA	NA	NA	79259145	79163829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_79164002_79168884_79168982_79171636_79171746_79172578_79172825_79173560_79173636_79223286_79223520_79259041
ENSMUSG00000075266.6_0	chr10	-	1510	3	FSM	ENSMUSG00000075266.6	ENSMUST00000099985.6	1532	3	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTAAAGCAAGATAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	30076545	30072015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30073223_30074461_30074576_30076356
ENSMUSG00000075271.5_0	chr2	-	3716	1	FSM	ENSMUSG00000075271.5	ENSMUST00000099994.5	3721	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATACGTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75812311	75808595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_75808600_75812300
ENSMUSG00000075273.5_0	chr2	-	2697	1	FSM	ENSMUSG00000075273.5	ENSMUST00000099996.5	2737	1	15	25	15	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAATGAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	75768914	75766217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_75766200_75768900
ENSMUSG00000075279.6_0	chr2	-	531	1	FSM	ENSMUSG00000075279.6	ENSMUST00000173086.2	580	1	5	44	5	-44	mono-exon	FALSE	NA	NA	NA	NA	NA	242	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74422248	74421717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_74421700_74422200
ENSMUSG00000075289.6_0	chr19	-	3954	10	FSM	ENSMUSG00000075289.6	ENSMUST00000167055.2	3968	10	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTGAAGTATCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4225474	4214332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4216564_4219526_4219808_4219897_4220130_4220824_4220911_4220994_4221170_4221410_4221899_4222144_4222235_4222957_4223220_4225003_4225031_4225392
ENSMUSG00000075289.6_1	chr19	-	3869	9	ISM	ENSMUSG00000075289.6	ENSMUST00000167055.2	3968	10	451	10	451	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTGAAGTATCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4225027	4214332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4216564_4219526_4219808_4219897_4220130_4220824_4220911_4220994_4221170_4221410_4221899_4222144_4222235_4222957_4223220_4225003
ENSMUSG00000075289.6_3	chr19	-	3846	8	ISM	ENSMUSG00000075289.6	ENSMUST00000167055.2	3968	10	2258	10	2258	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTGAAGTATCCGGAG	NA	NA	NA	NA	NA	NA	NA	NA	4223220	4214332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4216564_4219526_4219808_4219897_4220130_4220824_4220911_4220994_4221170_4221410_4221899_4222144_4222235_4222957
ENSMUSG00000075307.4_0	chr2	+	2518	6	FSM	ENSMUSG00000075307.4	ENSMUST00000100050.4	2529	6	7	4	7	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTTCCTCCCATTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	69500470	69514570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_69501651_69504701_69504860_69504966_69505075_69508423_69508610_69510027_69510175_69513831
ENSMUSG00000075316.12_0	chr2	-	5984	25	FSM	ENSMUSG00000075316.12	ENST00000644316.1	6000	25	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTGTGCATGTAACTC	NA	NA	NA	NA	NA	NA	NA	NA	66398598	66313566	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_66314949_66317718_66317990_66318325_66318431_66323422_66323561_66324229_66324284_66324952_66325235_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370640_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689_66392903_66393679_66393772_66395446_66395576_66396121_66396212_66396514_66396634_66398350
ENSMUSG00000075316.12_74	chr2	-	5933	26	FSM	ENSMUSG00000075316.12	ENST00000409435.6	5952	26	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGGAAATAGAGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	66398600	66313775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_66314949_66317718_66317990_66318325_66318431_66323422_66323561_66324229_66324284_66324952_66325235_66331956_66332080_66335192_66335367_66338863_66339019_66345658_66345777_66356951_66357429_66363405_66363763_66364457_66364632_66366441_66366681_66367613_66367744_66370607_66370980_66373378_66373664_66377366_66377574_66379323_66379466_66380683_66380748_66392689_66392903_66393679_66393772_66395446_66395576_66396121_66396212_66396514_66396634_66398350
ENSMUSG00000075324.14_0	chr2	-	724	3	FSM	ENSMUSG00000075324.14	ENST00000409634.5	739	3	10	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGCTTTGCAGAAACAGGA	NA	NA	NA	NA	NA	NA	NA	NA	63928350	63792910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_63793300_63927238_63927409_63928185
ENSMUSG00000075327.11_0	chr10	-	3064	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100077.5	3086	3	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGCATGTGATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4337460	4317081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_4319852_4324569_4324755_4337351
ENSMUSG00000075327.11_1	chr10	-	3217	3	FSM	ENSMUSG00000075327.11	ENSMUST00000100078.10	3226	3	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGCATGTGATCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	4338106	4317081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_4319852_4324569_4324755_4337844
ENSMUSG00000075330.5_0	chr16	-	1107	2	FSM	ENSMUSG00000075330.5	ENSMUST00000100083.5	1116	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCCAAATGTCTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	19703014	19695325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_19695861_19702442
ENSMUSG00000075330.5_2	chr16	-	882	3	FSM	ENSMUSG00000075330.5	ENSMUST00000231564.2	902	3	12	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAAACTAAGGAAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	19703012	19695442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_19695861_19702442_19702568_19702673
ENSMUSG00000075376.11_1	chr2	-	8777	20	FSM	ENSMUSG00000075376.11	ENSMUST00000100143.10	8799	20	17	5	17	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTAAAAGTTGTTTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	37304816	37260089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_37265441_37266653_37266803_37266900_37267009_37267145_37267281_37267366_37267449_37267862_37267948_37268319_37268534_37268869_37269017_37271881_37272050_37272794_37273229_37275257_37275473_37279596_37279903_37288255_37288369_37289598_37289718_37289832_37289966_37290540_37290742_37295255_37295432_37299445_37299680_37301151_37301270_37304527
ENSMUSG00000075394.5_0	chr15	+	1976	2	FSM	ENSMUSG00000075394.5	ENSMUST00000100164.5	1983	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTACGTCAATGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	102942820	102945271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102943588_102944062
ENSMUSG00000075410.14_0	chr11	+	771	5	FSM	ENSMUSG00000075410.14	ENSMUST00000116318.3	799	5	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGGAGCATCAATACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	116547950	116559202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116548134_116548363_116548433_116550123_116550203_116550558_116550654_116558857
ENSMUSG00000075415.14_0	chr2	-	8429	13	ISM	ENSMUSG00000075415.14	ENSMUST00000073879.12	8469	14	36455	6	-8847	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTACCTGGTTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30995359	30916223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253
ENSMUSG00000075415.14_1	chr2	-	8463	14	FSM	ENSMUSG00000075415.14	ENSMUST00000073879.12	8469	14	0	6	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTACCTGGTTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31031814	30916223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUSG00000075415.14_2	chr2	-	4492	15	FSM	ENSMUSG00000075415.14	ENSMUST00000113562.9	4515	15	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTACCTGGTTCTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	31031989	30916223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30918896_30923041_30923201_30926129_30926267_30926553_30926676_30927167_30927301_30930416_30930527_30944035_30944231_30945439_30945587_30948900_30949030_30972985_30973091_30974034_30974098_30986038_30986187_30987105_30987163_30995253_30995370_31031790
ENSMUSG00000075416.6_0	chr2	-	649	5	FSM	ENSMUSG00000075416.6	ENSMUST00000134755.2	668	5	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCTGAAATTAATGGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	30610059	30603167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30603427_30604379_30604414_30604874_30604991_30609717_30609883_30609984
ENSMUSG00000075416.6_1	chr2	-	582	4	ISM	ENSMUSG00000075416.6	ENSMUST00000134755.2	668	5	185	3	185	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAATGGCCTCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	30609884	30603161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_30603427_30604379_30604414_30604874_30604991_30609717
ENSMUSG00000075419.5_0	chr2	-	2081	1	FSM	ENSMUSG00000075419.5	ENSMUST00000100219.5	2104	1	12	11	12	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	361	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATTTAAAATACAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30176334	30174253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30174300_30176300
ENSMUSG00000075463.4_0	chr14	+	3585	3	FSM	ENSMUSG00000075463.4	ENSMUST00000161599.2	3595	3	1	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATATACCAAACATTAAAC	NA	NA	NA	NA	NA	NA	NA	NA	123150479	123166845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_123150705_123161033_123161090_123163541
ENSMUSG00000075467.5_0	chr2	-	2903	3	FSM	ENSMUSG00000075467.5	ENSMUST00000028295.9	2916	3	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1035	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCAAGTATGCGGGGCG	NA	NA	NA	NA	NA	NA	NA	NA	26242117	26238140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26240571_26241346_26241487_26241784
ENSMUSG00000075470.3_0	chr15	+	6628	3	FSM	ENSMUSG00000075470.3	ENSMUST00000100309.3	6644	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGTTGAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	90108522	90117667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_90108812_90109859_90110058_90111526
ENSMUSG00000075470.3_5	chr15	+	6438	3	FSM	ENSMUSG00000075470.3	ENSMUST00000231200.2	6457	3	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATTGTTGAATATAT	NA	NA	NA	NA	NA	NA	NA	NA	90108563	90117667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_90108812_90109859_90110058_90111675
ENSMUSG00000075486.11_0	chr14	-	1075	4	FSM	ENSMUSG00000075486.11	ENSMUST00000100339.9	1090	4	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTCAGTTTTATGACG	NA	NA	NA	NA	NA	NA	NA	NA	101878116	101871210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101871829_101874389_101874543_101877723_101877736_101877824
ENSMUSG00000075486.11_1	chr14	-	1058	3	NNC	ENSMUSG00000075486.11	novel	519	3	NA	NA	15	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATTCAGTTTTATGACG	NA	NA	NA	NA	NA	NA	NA	NA	101878107	101871210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_-_101871829_101874389_101874543_101877820
ENSMUSG00000075486.11_3	chr14	-	517	3	FSM	ENSMUSG00000075486.11	ENSMUST00000168587.3	519	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAGAATAAAAATAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	101877893	101871533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_101871829_101874389_101874543_101877824
ENSMUSG00000075502.3_0	chr14	+	2973	1	FSM	ENSMUSG00000075502.3	ENSMUST00000100359.3	2982	1	5	4	5	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAAGATCAGAGTTCGTA	NA	NA	NA	NA	NA	NA	NA	NA	79689279	79692252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_79689300_79692300
ENSMUSG00000075511.10_0	chr15	-	2240	4	FSM	ENSMUSG00000075511.10	ENSMUST00000100370.2	2270	4	26	4	26	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGAAATAAAAGGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	83251452	83241764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_83243152_83248020_83248130_83249229_83249712_83251190
ENSMUSG00000075525.4_0	chr2	-	592	1	NIC	ENSMUSG00000075525.4	novel	618	2	NA	NA	24	-6	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAACTGGCCCAGCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	14609398	14608806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_14608800_14609400
ENSMUSG00000075528.14_0	chr11	-	1494	12	FSM	ENSMUSG00000075528.14	ENSMUST00000070395.9	1516	12	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	669	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAACATGGTTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	101308426	101297671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101308175
ENSMUSG00000075558.4_0	chr10	-	359	2	FSM	ENSMUSG00000075558.4	ENSMUST00000105760.3	367	2	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTGAGATAGAGGGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	80604819	80602698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_80602964_80604725
ENSMUSG00000075573.5_0	chr14	+	324	2	FSM	ENSMUSG00000075573.5	ENSMUST00000100492.5	359	2	33	2	33	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAATATCCTGCGTCCG	NA	NA	NA	NA	NA	NA	NA	NA	63235558	63238607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_63235609_63238333
ENSMUSG00000075576.13_0	chr11	-	1385	3	FSM	ENSMUSG00000075576.13	ENSMUST00000139017.2	1399	3	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAACCACAAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	98700909	98689144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98690060_98692791_98692854_98700501
ENSMUSG00000075585.4_0	chr5	+	5514	1	FSM	ENSMUSG00000075585.4	ENSMUST00000187923.2	5522	1	4	4	4	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTCGTTGCACCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	138980814	138986328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138980800_138986300
ENSMUSG00000075590.5_0	chr15	-	3142	18	FSM	ENSMUSG00000075590.5	ENSMUST00000228366.3	3192	18	38	12	38	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAAAACATCAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	75963438	75957378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75958994_75959079_75959136_75959221_75959286_75959369_75959424_75960139_75960276_75960358_75960410_75960498_75960602_75960713_75960847_75961285_75961382_75961458_75961515_75961596_75961681_75961750_75961775_75961900_75961996_75962094_75962136_75962301_75962392_75962486_75962589_75962656_75962780_75963219
ENSMUSG00000075592.11_0	chr14	+	7502	8	FSM	ENSMUSG00000075592.11	ENSMUST00000168479.3	7511	8	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATGGAGCCAATGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	56091473	56112184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56091884_56100409_56101069_56101189_56102591_56103415_56103547_56103667_56103765_56105477_56105580_56105870_56105973_56107584
ENSMUSG00000075595.10_0	chr11	+	10422	6	FSM	ENSMUSG00000075595.10	ENSMUST00000107717.8	10433	6	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATATTCCCACGTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	95603502	95663172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_95603560_95639825_95640974_95643700_95643849_95644187_95644304_95644736_95644882_95654364
ENSMUSG00000075600.4_0	chr15	-	3356	12	FSM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTGTCTTGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	75713759	75626279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104_75712414_75713698
ENSMUSG00000075600.4_1	chr15	-	3295	11	ISM	ENSMUSG00000075600.4	ENSMUST00000100538.4	3362	12	1351	1	1351	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGGCCTGTCTTGACTAC	NA	NA	NA	NA	NA	NA	NA	NA	75712413	75626279	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_75626800_75628471_75628816_75629388_75629574_75648838_75648971_75650914_75650985_75651128_75651288_75651362_75651406_75657301_75657487_75681376_75681528_75709315_75709513_75711104
ENSMUSG00000075602.11_0	chr15	-	804	3	FSM	ENSMUSG00000075602.11	ENSMUST00000023248.13	819	3	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74869468	74866726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74867329_74868300_74868418_74869383
ENSMUSG00000075602.11_1	chr15	-	875	4	FSM	ENSMUSG00000075602.11	ENSMUST00000189068.7	878	4	2	1	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74869754	74866726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74867329_74868300_74868418_74869383_74869482_74869696
ENSMUSG00000075602.11_2	chr15	-	947	4	FSM	ENSMUSG00000075602.11	ENSMUST00000187994.7	955	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGTTCTCCATTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74869872	74866726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869727
ENSMUSG00000075602.11_9	chr15	-	853	4	FSM	ENSMUSG00000075602.11	ENSMUST00000186526.7	862	4	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAATAAACCCTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	74869772	74866751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74867329_74868300_74868418_74869383_74869467_74869696
ENSMUSG00000075700.11_0	chr3	+	3133	6	FSM	ENSMUSG00000075700.11	ENSMUST00000107924.3	3157	6	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAAGGAACCCTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58484071	58500545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_58484295_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ENSMUSG00000075700.11_2	chr3	+	1010	6	FSM	ENSMUSG00000075700.11	ENST00000485923.1	1019	6	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCACTGGTCATAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	58484138	58498316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_58484468_58492651_58492763_58493372_58493500_58495866_58495955_58497587_58497742_58498115
ENSMUSG00000075701.11_0	chr7	+	1174	6	FSM	ENSMUSG00000075701.11	ENSMUST00000101801.8	1191	6	11	6	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCACAGTCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65729407	65739147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737020_65738514
ENSMUSG00000075701.11_4	chr7	+	1140	6	FSM	ENSMUSG00000075701.11	ENSMUST00000206575.2	1157	6	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCACAGTCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	65729438	65739147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65729538_65730079_65730215_65733147_65733255_65736694_65736785_65736940_65737017_65738514
ENSMUSG00000075702.11_0	chr11	+	696	5	FSM	ENSMUSG00000075702.11	ENSMUST00000094469.6	707	5	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCGGAGTCTCTTCTTATT	NA	NA	NA	NA	NA	NA	NA	NA	3464876	3467350	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3465074_3466260_3466297_3466485_3466521_3466841_3466921_3467001
ENSMUSG00000075703.17_0	chr5	+	6787	10	FSM	ENSMUSG00000075703.17	ENSMUST00000145167.9	6803	10	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTTTTTAATTGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	30437587	30477418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_30437814_30452460_30452530_30453409_30453519_30457707_30457783_30461075_30461339_30462709_30462819_30468068_30468118_30469272_30469454_30470335_30470522_30471898
ENSMUSG00000075704.18_16	chr16	+	477	4	FSM	ENSMUSG00000075704.18	ENSMUST00000126778.8	491	4	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTTAACTTGCTCCC	NA	NA	NA	NA	NA	NA	NA	NA	18247451	18256551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18247506_18248560_18248627_18255310_18255368_18256251
ENSMUSG00000075704.18_18	chr16	+	1379	13	FSM	ENSMUSG00000075704.18	ENST00000400518.5	1391	13	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCCCAATAGAAGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	18256261	18296568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262037_18273225_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400
ENSMUSG00000075704.18_2	chr16	+	1797	17	FSM	ENSMUSG00000075704.18	ENSMUST00000206606.3	1809	17	6	6	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGCATGTCTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18245172	18297814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUSG00000075704.18_4	chr16	+	1885	18	FSM	ENSMUSG00000075704.18	ENSMUST00000115606.9	1905	18	11	9	-10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAAGCATGTCTGCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	18245177	18297814	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18245310_18248560_18248627_18255310_18255368_18256251_18256397_18257068_18257144_18259542_18259622_18260497_18260561_18261953_18262025_18272470_18272491_18273238_18273331_18274773_18274949_18287499_18287637_18290903_18291000_18291543_18291637_18293431_18293504_18294271_18294370_18296400_18296608_18297607
ENSMUSG00000075705.14_0	chr17	+	869	5	FSM	ENSMUSG00000075705.14	ENSMUST00000115262.9	886	5	12	5	12	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGTTTCCGTGTTTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	24955627	24961747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879_24960912_24961283
ENSMUSG00000075705.14_1	chr17	+	1187	4	FSM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTGAGCCGTTTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24955673	24961739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_24955737_24958472_24958622_24959053_24959169_24960879
ENSMUSG00000075705.14_2	chr17	+	1117	3	ISM	ENSMUSG00000075705.14	ENSMUST00000101800.7	1211	4	2818	12	2818	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCAGCCTGAGCCGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24958473	24961733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_24958622_24959053_24959169_24960879
ENSMUSG00000075706.12_0	chr10	+	939	7	FSM	ENSMUSG00000075706.12	ENSMUST00000105372.9	959	7	11	9	11	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	8333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGCTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79889332	79892264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79889550_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000075706.12_13	chr10	+	976	7	FSM	ENSMUSG00000075706.12	ENSMUST00000097227.11	995	7	10	9	10	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAATGTGCTGCTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	79889880	79892264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_79890135_79890347_79890443_79890533_79890679_79890801_79890954_79891756_79891782_79891873_79891934_79892019
ENSMUSG00000076431.5_0	chr13	-	4776	1	FSM	ENSMUSG00000076431.5	ENSMUST00000067230.6	4795	1	10	9	10	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	1052	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCTAAATCTTGACTTTT	NA	NA	NA	NA	NA	NA	NA	NA	29137686	29132910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_29132900_29137700
ENSMUSG00000076432.14_0	chr12	-	2181	6	FSM	ENSMUSG00000076432.14	ENSMUST00000135088.9	2197	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	8973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGTGCCTTGGCTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	21467628	21440077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798_21467133_21467504
ENSMUSG00000076432.14_2	chr12	-	2089	5	FSM	ENSMUSG00000076432.14	ENSMUST00000103002.8	2110	5	12	9	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACCATTTATTATGGC	NA	NA	NA	NA	NA	NA	NA	NA	21467425	21440338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_21441417_21444965_21445062_21446282_21446447_21448241_21448366_21466798
ENSMUSG00000076435.4_0	chr11	-	3139	16	FSM	ENSMUSG00000076435.4	ENSMUST00000103164.4	3154	16	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCCTGATTGGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	94492686	94447931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_94449184_94449465_94449535_94449690_94449802_94450288_94450431_94452065_94452218_94453636_94453745_94460135_94460213_94460766_94460859_94461128_94461287_94461439_94461536_94462096_94462263_94462387_94462507_94463051_94463106_94463347_94463477_94463858_94464055_94492468
ENSMUSG00000076437.12_0	chr2	-	724	4	FSM	ENSMUSG00000076437.12	ENSMUST00000117299.10	747	4	13	10	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAGGAGCAAGTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	84501101	84499568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84499742_84500330_84500461_84500588_84500735_84500826
ENSMUSG00000076437.12_3	chr2	-	633	4	FSM	ENSMUSG00000076437.12	ENSMUST00000102647.11	654	4	12	9	1	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGAGAATAAGGAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	84501040	84499573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84499742_84500355_84500461_84500588_84500735_84500826
ENSMUSG00000076437.12_8	chr2	-	756	3	FSM	ENSMUSG00000076437.12	ENSMUST00000102646.4	783	3	19	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTGTGGCTTACTTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	84501022	84500046	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84500461_84500588_84500735_84500826
ENSMUSG00000076439.13_0	chr17	-	615	3	FSM	ENSMUSG00000076439.13	ENST00000376898.7	626	3	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCGGTGTCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	37331605	37323229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_37323375_37328366_37328494_37331262
ENSMUSG00000076439.13_1	chr17	-	507	2	FSM	ENSMUSG00000076439.13	ENST00000416766.6	521	2	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCGGTGTCTGGGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	37331602	37323229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_37323397_37331262
ENSMUSG00000076441.10_0	chr2	+	1686	16	FSM	ENSMUSG00000076441.10	ENSMUST00000102840.5	1696	16	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	4750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTCTCTGCGTGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	31360227	31410683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_31360352_31364718_31364783_31366897_31367008_31368946_31369016_31370986_31371176_31376500_31376558_31378589_31378665_31382325_31382397_31383156_31383188_31388158_31388250_31390844_31390930_31391499_31391565_31400121_31400254_31404690_31404848_31408737_31408804_31410383
ENSMUSG00000077222.3_0	chr5	+	124	1	FSM	ENSMUSG00000077222.3	ENSMUST00000104034.3	132	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACAGCCTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	108053042	108053166	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_108053000_108053200
ENSMUSG00000077450.14_0	chr17	-	6089	5	FSM	ENSMUSG00000077450.14	ENSMUST00000057373.14	6109	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTGCATTTTTGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	33979491	33961464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33966788_33967483_33967565_33967840_33968035_33968755_33968952_33979196
ENSMUSG00000077450.14_6	chr17	-	338	3	FSM	ENSMUSG00000077450.14	ENST00000601897.1	347	3	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGGGCCCCGGGTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	33979261	33967485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33967565_33967840_33968035_33979196
ENSMUSG00000078087.6_0	chr7	+	489	1	FSM	ENSMUSG00000078087.6	ENSMUST00000183090.2	399	1	-77	-13	-77	13	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	55663686	55664175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_55663700_55664200
ENSMUSG00000078087.6_1	chr7	+	431	2	Genic_Genomic	ENSMUSG00000078087.6	novel	399	1	NA	NA	-71	12	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAAAAAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	55663692	55664174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr7_+_55663726_55663776
ENSMUSG00000078126.5_0	chr14	+	506	1	FSM	ENSMUSG00000078126.5	ENSMUST00000104925.5	468	1	5	-43	5	43	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCATAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33892616	33893122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_33892600_33893100
ENSMUSG00000078134.2_0	chr11	-	1286	1	FSM	ENSMUSG00000078134.2	ENSMUST00000104933.2	1311	1	3	22	3	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98516484	98515198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_98515200_98516500
ENSMUSG00000078139.4_0	chr13	+	1900	1	FSM	ENSMUSG00000078139.4	ENSMUST00000104942.2	1924	1	10	14	10	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATGAAAAAAAAAAAGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	21679402	21681302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21679400_21681300
ENSMUSG00000078143.4_0	chr8	-	617	4	FSM	ENSMUSG00000078143.4	ENSMUST00000173980.2	621	4	0	4	0	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGGCTAGCCCCGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	110595064	110586619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110586664_110587455_110587662_110587731_110587962_110594927
ENSMUSG00000078143.4_2	chr8	-	1141	2	FSM	ENSMUSG00000078143.4	ENSMUST00000171173.2	1159	2	12	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGCTTTACAAGCAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	110595075	110588362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_110589356_110594927
ENSMUSG00000078154.4_0	chr11	-	1275	1	FSM	ENSMUSG00000078154.4	ENSMUST00000104959.2	1310	1	19	16	19	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATTAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	48717463	48716188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48716200_48717500
ENSMUSG00000078185.4_0	chr1	-	6902	2	FSM	ENSMUSG00000078185.4	ENSMUST00000104984.4	6905	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTGTGCTCAATTGAT	NA	NA	NA	NA	NA	NA	NA	NA	175520196	175509805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_175516247_175519735
ENSMUSG00000078190.8_0	chr1	+	7909	1	FSM	ENSMUSG00000078190.8	ENSMUST00000139662.2	7928	1	8	11	8	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGTATGAAGATGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	162045199	162053108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_162045200_162053100
ENSMUSG00000078193.3_0	chr1	+	435	1	FSM	ENSMUSG00000078193.3	ENSMUST00000102782.4	445	1	4	6	4	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	137	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACTGGCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	156193613	156194048	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156193600_156194000
ENSMUSG00000078201.6_0	chr2	+	831	1	FSM	ENSMUSG00000078201.6	ENSMUST00000104998.5	854	1	18	5	18	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTATTCATGCTCTGAATT	NA	NA	NA	NA	NA	NA	NA	NA	25145468	25146299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_25145500_25146300
ENSMUSG00000078240.3_0	chr18	+	1641	1	FSM	ENSMUSG00000078240.3	ENSMUST00000105038.3	1656	1	6	9	6	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATCTGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34869417	34871058	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_34869400_34871100
ENSMUSG00000078249.6_0	chr11	+	1586	1	FSM	ENSMUSG00000078249.6	ENSMUST00000105046.4	1626	1	10	30	10	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	2506	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAGTCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120653629	120655215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120653600_120655200
ENSMUSG00000078300.4_0	chr15	+	1197	1	FSM	ENSMUSG00000078300.4	ENSMUST00000100754.5	1002	1	-19	-176	-19	176	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	12574955	12576152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_12575000_12576200
ENSMUSG00000078317.7_0	chrX	+	2495	1	FSM	ENSMUSG00000078317.7	ENSMUST00000105111.4	2505	1	5	5	5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	280	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTACTGATTCTTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	72271901	72274396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_72271900_72274400
ENSMUSG00000078348.5_0	chr10	+	3827	1	FSM	ENSMUSG00000078348.5	ENSMUST00000105139.5	3841	1	13	1	13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	1409	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGTATGGATTGCT	NA	NA	NA	NA	NA	NA	NA	NA	12881099	12884926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_12881100_12884900
ENSMUSG00000078349.4_0	chr4	+	1848	1	FSM	ENSMUSG00000078349.4	ENSMUST00000105140.3	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTGAAAGGTGATCTG	NA	NA	NA	NA	NA	NA	NA	NA	156287760	156289608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156287800_156289600
ENSMUSG00000078350.12_0	chr4	-	3363	5	FSM	ENSMUSG00000078350.12	ENSMUST00000143047.8	3373	5	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAATGCCTGCGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	154110418	154105049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154107911_154108144_154108349_154108523_154108651_154109960_154110079_154110365
ENSMUSG00000078350.12_2	chr4	-	695	4	FSM	ENSMUSG00000078350.12	ENSMUST00000146054.8	707	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCAGCCCTGGGGATTC	NA	NA	NA	NA	NA	NA	NA	NA	154110601	154107773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154107911_154108144_154108349_154109960_154110079_154110365
ENSMUSG00000078377.6_0	chr12	+	557	1	FSM	ENSMUSG00000078377.6	ENSMUST00000105169.6	614	1	42	15	42	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGTTACCACTAATACACG	NA	NA	NA	NA	NA	NA	NA	NA	12073087	12073644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_12073100_12073600
ENSMUSG00000078427.4_0	chr10	+	902	11	FSM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	2	14	-1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	2478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATAAAAAAGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128657764	128713472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128657841_128669180_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUSG00000078427.4_3	chr10	+	932	12	FSM	ENSMUSG00000078427.4	ENSMUST00000219512.2	953	12	3	18	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAAAAAGGAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	128657768	128713475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_128657841_128666819_128666854_128669180_128669281_128674315_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUSG00000078427.4_6	chr10	+	828	10	ISM	ENSMUSG00000078427.4	ENSMUST00000105230.4	918	11	11416	14	11413	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAATAAAAAAGGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	128669178	128713472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_128669281_128674312_128674360_128675670_128675739_128682400_128682453_128684105_128684180_128684629_128684659_128687025_128687052_128689051_128689121_128708289_128708380_128713201
ENSMUSG00000078429.10_0	chr10	+	4799	8	FSM	ENSMUSG00000078429.10	ENSMUST00000105256.10	4817	8	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACCTGTGCAGGACTGG	NA	NA	NA	NA	NA	NA	NA	NA	126814594	126835829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126815171_126827399_126827546_126828467_126828507_126828876_126828979_126829720_126829778_126831723_126831817_126831894_126832081_126832229
ENSMUSG00000078429.10_3	chr10	+	4123	3	FSM	ENSMUSG00000078429.10	ENSMUST00000105255.3	4136	3	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACTGGGAGCTGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	126831491	126835841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126831817_126831894_126832081_126832229
ENSMUSG00000078435.6_0	chr10	+	2605	4	FSM	ENSMUSG00000078435.6	ENSMUST00000201286.4	2634	4	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCAAGAAGTTTCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	81963870	81988894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81963933_81974086_81974214_81986050_81986112_81986539
ENSMUSG00000078444.4_0	chr10	-	682	2	FSM	ENSMUSG00000078444.4	ENSMUST00000105408.4	708	2	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACATAAAATAAATAATTA	NA	NA	NA	NA	NA	NA	NA	NA	77095049	77093627	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_77093821_77094560
ENSMUSG00000078451.6_1	chr10	+	609	4	FSM	ENSMUSG00000078451.6	ENST00000424445.6	628	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGGAGGAGGTGAGCTGA	NA	NA	NA	NA	NA	NA	NA	NA	41366397	41377916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41366618_41374357_41374547_41377620_41377684_41377779
ENSMUSG00000078452.11_0	chr10	+	1413	8	FSM	ENSMUSG00000078452.11	ENSMUST00000182677.8	1425	8	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22236454	22250030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22236551_22237474_22237545_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUSG00000078452.11_3	chr10	+	1263	7	FSM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22237792	22250030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22237809_22238169_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUSG00000078452.11_4	chr10	+	1235	6	ISM	ENSMUSG00000078452.11	ENSMUST00000095795.5	1271	7	389	8	389	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTAAGGTATGTGCTCC	NA	NA	NA	NA	NA	NA	NA	NA	22238181	22250030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_22238261_22238586_22238705_22246764_22247014_22247265_22247530_22248087_22248258_22249675
ENSMUSG00000078453.4_0	chr10	-	835	3	FSM	ENSMUSG00000078453.4	ENSMUST00000020002.9	846	3	8	3	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTCCTGGTGGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	17899028	17887010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_17887565_17894586_17894654_17898814
ENSMUSG00000078453.4_1	chr10	-	762	3	FSM	ENSMUSG00000078453.4	ENSMUST00000220110.2	768	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATTTCCTGGTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	17898960	17887011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_17887565_17894586_17894650_17898814
ENSMUSG00000078490.11_0	chr4	+	2339	5	FSM	ENSMUSG00000078490.11	ENSMUST00000123952.9	2365	5	24	2	24	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	155493738	155506447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_155494028_155500136_155500223_155503076_155503153_155503303_155503448_155504703
ENSMUSG00000078515.5_0	chr4	-	9531	10	FSM	ENSMUSG00000078515.5	ENSMUST00000102484.5	9553	10	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAAGACTTGTTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	141450717	141404868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_141412943_141416580_141416643_141419565_141419756_141422717_141422822_141426040_141426170_141430422_141430551_141433242_141433370_141435530_141435768_141440707_141440838_141450367
ENSMUSG00000078517.13_0	chr4	+	6209	23	FSM	ENSMUSG00000078517.13	ENSMUST00000082262.8	6226	23	11	6	-6	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATTTTTACTATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	139079914	139106035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092496_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ENSMUSG00000078517.13_1	chr4	+	4702	23	FSM	ENSMUSG00000078517.13	ENSMUST00000042096.15	4706	23	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGCATTCCTGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	139079924	139104547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_139080029_139081471_139081597_139082122_139082189_139082402_139082497_139084813_139084943_139086550_139086678_139087340_139087491_139087767_139087936_139088190_139088263_139088572_139088636_139089406_139089530_139090476_139090574_139090967_139091091_139092505_139092706_139092828_139092979_139093685_139093848_139094404_139094525_139097185_139097324_139098234_139098409_139098906_139099118_139101119_139101205_139102390_139102521_139102656
ENSMUSG00000078521.3_0	chr4	+	1248	3	FSM	ENSMUSG00000078521.3	ENSMUST00000105866.3	1275	3	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCATGCTGGTTGGTGTCG	NA	NA	NA	NA	NA	NA	NA	NA	134238329	134251231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134238481_134248782_134248913_134250264
ENSMUSG00000078521.3_1	chr4	+	1218	4	FSM	ENSMUSG00000078521.3	ENST00000538789.5	1224	4	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAAGAACCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	134238401	134253826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_134238481_134248782_134248913_134250264_134251057_134253609
ENSMUSG00000078521.3_2	chr4	+	1142	3	ISM	ENSMUSG00000078521.3	ENST00000538789.5	1224	4	10380	4	10380	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAAGAACCTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	134248779	134253826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_134248913_134250264_134251057_134253609
ENSMUSG00000078546.9_0	chr17	-	1695	3	ISM	ENSMUSG00000078546.9	ENSMUST00000106026.3	1744	4	20738	1	20738	-1	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCTAAGAAAATACCTGG	NA	NA	NA	NA	NA	NA	NA	NA	22106335	22098551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_22100076_22100938_22101066_22106291
ENSMUSG00000078546.9_1	chr17	-	1736	4	FSM	ENSMUSG00000078546.9	ENSMUST00000106026.3	1744	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTCAGACCTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22127073	22098558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029
ENSMUSG00000078546.9_2	chr17	-	2213	5	FSM	ENSMUSG00000078546.9	ENSMUST00000190066.7	2221	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTCAGACCTAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22128907	22098558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22100076_22100938_22101066_22106291_22106340_22127029_22127178_22128534
ENSMUSG00000078552.11_0	chr4	-	647	5	FSM	ENSMUSG00000078552.11	ENST00000409358.2	657	5	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGTCTGAGGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	129508037	129504122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_129504271_129504701_129504834_129505055_129505133_129505561_129505614_129507799
ENSMUSG00000078566.9_0	chr7	-	1739	6	FSM	ENSMUSG00000078566.9	ENSMUST00000106112.2	1756	6	9	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAATTAGATCGCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	138511226	138492572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_138493690_138496108_138496259_138496338_138496446_138499724_138499807_138500409_138500558_138511091
ENSMUSG00000078566.9_5	chr7	-	465	4	ISM	ENSMUSG00000078566.9	ENSMUST00000130500.8	719	5	10678	110	14	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGCTTGGGGTAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	138500546	138496119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_138496259_138496338_138496446_138499724_138499807_138500409
ENSMUSG00000078570.11_0	chr4	-	952	3	FSM	ENSMUSG00000078570.11	ENSMUST00000106190.10	968	3	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGACCTTTCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	124744587	124743278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124743756_124744024_124744227_124744314
ENSMUSG00000078570.11_1	chr4	-	753	3	FSM	ENSMUSG00000078570.11	ENSMUST00000163946.2	762	3	0	9	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGTGACTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	124744523	124743286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124743756_124744024_124744227_124744441
ENSMUSG00000078570.11_2	chr4	-	669	2	FSM	ENSMUSG00000078570.11	ENSMUST00000137769.3	659	2	44	-54	44	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGGTGACTGACCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	124744222	124743284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124743756_124744024
ENSMUSG00000078572.4_0	chr11	+	765	3	FSM	ENSMUSG00000078572.4	ENSMUST00000106223.4	781	3	15	1	-1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTGGGCTGGAGAGATTG	NA	NA	NA	NA	NA	NA	NA	NA	119989768	119991530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_119989892_119989973_119990085_119990999
ENSMUSG00000078578.10_0	chr3	+	1496	8	FSM	ENSMUSG00000078578.10	ENSMUST00000106291.10	1512	8	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACCAATGAGTTAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	135144003	135171812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135144114_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_15	chr3	+	2486	8	FSM	ENSMUSG00000078578.10	ENSMUST00000166033.6	2504	8	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAACATTTAAATATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	135144249	135172702	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135144460_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_26	chr3	+	3815	8	FSM	ENSMUSG00000078578.10	ENSMUST00000197859.5	3833	8	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACACTTTGGTCTTACT	NA	NA	NA	NA	NA	NA	NA	NA	135144336	135173952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135144626_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_40	chr3	+	2495	7	FSM	ENSMUSG00000078578.10	ENSMUST00000197539.5	2515	7	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCAATGCTATTGGATTGT	NA	NA	NA	NA	NA	NA	NA	NA	135144908	135172425	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078578.10_6	chr3	+	822	8	FSM	ENSMUSG00000078578.10	ENST00000349311.12	842	8	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGCTCATCTGAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	135144221	135171146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135144324_135145404_135145560_135160946_135161011_135161106_135161139_135164558_135164637_135165735_135165842_135168710_135168805_135170955
ENSMUSG00000078580.4_0	chr7	-	2046	3	FSM	ENSMUSG00000078580.4	ENSMUST00000074249.7	2063	3	5	12	-5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCAAAGTATCTATGA	NA	NA	NA	NA	NA	NA	NA	NA	126992796	126990090	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126991688_126992172_126992287_126992461
ENSMUSG00000078580.4_2	chr7	-	460	2	FSM	ENSMUSG00000078580.4	ENST00000252799.3	476	2	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCACCAACATAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	126992602	126990601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126990632_126992172
ENSMUSG00000078580.4_3	chr7	-	461	2	FSM	ENSMUSG00000078580.4	ENST00000395094.3	474	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGCACCAACATAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	126992605	126990601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126990630_126992172
ENSMUSG00000078580.4_5	chr7	-	431	1	NIC	ENSMUSG00000078580.4	novel	3324	3	NA	NA	12	-1574	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	191	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGGACTGGGTACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	126992603	126992172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr7_-_126992200_126992600
ENSMUSG00000078584.10_0	chr4	-	7137	5	FSM	ENSMUSG00000078584.10	ENSMUST00000141112.2	7151	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGTTTTGCTTGTTCCCC	NA	NA	NA	NA	NA	NA	NA	NA	119089899	119077042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_119083725_119083997_119084130_119085223_119085311_119089550_119089667_119089779
ENSMUSG00000078607.7_0	chr11	+	1665	5	FSM	ENSMUSG00000078607.7	ENSMUST00000140447.4	1677	5	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAGAAAGCACCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	106916513	106921259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106916580_106916696_106916796_106918635_106919095_106919191_106919384_106920410
ENSMUSG00000078607.7_1	chr11	+	1483	4	FSM	ENSMUSG00000078607.7	ENST00000580729.3	1510	4	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGATCAAACAGCAGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	106916555	106921002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_106916796_106918635_106919095_106919191_106919384_106920410
ENSMUSG00000078619.11_0	chr11	-	2733	13	FSM	ENSMUSG00000078619.11	ENSMUST00000021052.16	2747	13	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106163784	106154004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159_106158345_106163318
ENSMUSG00000078619.11_1	chr11	-	2548	12	FSM	ENSMUSG00000078619.11	ENSMUST00000106843.8	2548	12	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCAGACCTGGTCATTGA	NA	NA	NA	NA	NA	NA	NA	NA	106158625	106154004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106154946_106155020_106155123_106155258_106155382_106155497_106155634_106155765_106155864_106156008_106156171_106156485_106156588_106156713_106156810_106157362_106157519_106157716_106157840_106157963_106158007_106158159
ENSMUSG00000078622.9_0	chr11	-	5175	13	FSM	ENSMUSG00000078622.9	ENSMUST00000002043.10	5193	13	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAAACCTCATGGTTAGG	NA	NA	NA	NA	NA	NA	NA	NA	106107156	106088237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_106091843_106092836_106093005_106093209_106093320_106093553_106093613_106094363_106094450_106095746_106095858_106096185_106096288_106098831_106098898_106099020_106099143_106101113_106101289_106102498_106102607_106103906_106104188_106106974
ENSMUSG00000078627.10_0	chr11	-	2725	10	FSM	ENSMUSG00000078627.10	ENST00000311269.10	2733	10	7	1	7	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTTTTGTGTTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	105342000	105251624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_105252026_105255341_105255385_105262687_105262802_105272983_105273094_105276242_105276413_105280409_105281758_105287774_105287922_105299464_105299641_105329644_105329762_105341901
ENSMUSG00000078636.5_0	chr7	+	1200	1	FSM	ENSMUSG00000078636.5	ENSMUST00000107041.5	1232	1	28	4	28	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	300	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACCCACAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51396422	51397622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_51396400_51397600
ENSMUSG00000078640.10_0	chr11	-	798	3	FSM	ENSMUSG00000078640.10	ENSMUST00000107081.8	818	3	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGCTTCTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	102470267	102467223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102467624_102469575_102469722_102470015
ENSMUSG00000078650.3_0	chr11	+	974	4	FSM	ENSMUSG00000078650.3	ENST00000592383.5	985	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGCGCAACAGTTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	101258550	101267535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101258853_101261531_101261666_101265415_101265532_101267113
ENSMUSG00000078650.3_2	chr11	+	1040	4	FSM	ENSMUSG00000078650.3	ENST00000585489.1	1054	4	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	3143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCAAAGGACTAGGAACAA	NA	NA	NA	NA	NA	NA	NA	NA	101258576	101267661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101258853_101261531_101261642_101263527_101263634_101267113
ENSMUSG00000078652.10_0	chr11	+	2647	11	FSM	ENSMUSG00000078652.10	ENSMUST00000019470.14	2664	11	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGCAGACCCTGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	101207046	101214354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101211036_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078652.10_8	chr11	+	2650	11	FSM	ENSMUSG00000078652.10	ENST00000293362.7	2667	11	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGACATAAGGGTCACACA	NA	NA	NA	NA	NA	NA	NA	NA	101207126	101214390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101207315_101208006_101208040_101208154_101208218_101208448_101208554_101210281_101210331_101210737_101210851_101210989_101211106_101211222_101211291_101211386_101211442_101211552_101211640_101212617
ENSMUSG00000078656.12_0	chr11	+	601	6	FSM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTTTTTTTTTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	101144539	101148868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
ENSMUSG00000078656.12_1	chr11	+	1210	6	FSM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	4	6	-2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCCCACTGTCGGCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	101144558	101150365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101144634_101144856_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
ENSMUSG00000078656.12_2	chr11	+	856	6	FSM	ENSMUSG00000078656.12	ENSMUST00000107280.11	876	6	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATAAGTACACACCCAC	NA	NA	NA	NA	NA	NA	NA	NA	101144569	101150138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101144634_101144856_101145003_101145744_101145823_101146834_101146924_101147703_101147780_101149735
ENSMUSG00000078656.12_3	chr11	+	514	5	ISM	ENSMUSG00000078656.12	ENSMUST00000007533.15	615	6	324	0	278	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTGTGACTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	101144856	101148875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101148726
ENSMUSG00000078656.12_4	chr11	+	1130	5	ISM	ENSMUSG00000078656.12	ENSMUST00000100414.12	1220	6	302	11	278	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTACTCCCACTGTCGGC	NA	NA	NA	NA	NA	NA	NA	NA	101144856	101150360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_101145003_101145768_101145823_101146834_101146924_101147703_101147780_101149595
ENSMUSG00000078670.4_0	chr7	+	547	2	FSM	ENSMUSG00000078670.4	ENST00000327355.6	567	2	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCCTTAAAGCAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	73390259	73426637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_73390565_73426395
ENSMUSG00000078671.12_24	chr7	-	499	4	ISM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	5683	9	5683	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAGGTAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	73199400	73165482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_73165561_73169224_73169457_73190519_73190653_73199344
ENSMUSG00000078671.12_25	chr7	-	575	5	FSM	ENSMUSG00000101970.9	ENST00000629685.2	589	5	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGGAAGAGGTAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	73205078	73165482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73165561_73169224_73169457_73190519_73190653_73199344_73199401_73205002
ENSMUSG00000078671.12_31	chr7	-	857	3	FSM	ENSMUSG00000101970.9	ENST00000629346.2	871	3	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGTATATGATCCAATTT	NA	NA	NA	NA	NA	NA	NA	NA	73191483	73189429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73189664_73190519_73190653_73190993
ENSMUSG00000078671.12_8	chr7	-	1925	12	FSM	ENSMUSG00000078671.12	ENST00000626782.2	1946	12	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	727	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAGAACATACGCTTAGA	NA	NA	NA	NA	NA	NA	NA	NA	73187539	73147452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73147580_73149341_73149521_73149686_73149732_73150682_73150784_73151656_73151883_73153128_73153263_73154735_73154877_73157553_73157662_73163837_73163900_73165473_73165561_73169224_73169457_73187056
ENSMUSG00000078676.10_0	chr11	+	3963	15	FSM	ENSMUSG00000078676.10	ENSMUST00000017384.14	3963	15	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTTATTGTGTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	98695730	98724640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98695813_98700501_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ENSMUSG00000078676.10_1	chr11	+	3727	14	FSM	ENSMUSG00000078676.10	ENSMUST00000169695.2	3741	14	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTGACTCTGTGGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98700640	98724625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98700918_98701284_98701313_98701723_98701762_98712256_98712410_98712485_98712638_98713186_98713364_98713545_98714226_98718397_98718463_98719380_98719496_98719685_98719785_98720039_98720255_98722113_98722237_98722368_98722435_98723086
ENSMUSG00000078681.11_1	chr7	+	896	5	FSM	ENSMUSG00000078681.11	ENSMUST00000032726.14	908	5	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGAACCACGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	65343158	65351641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65343318_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUSG00000078681.11_10	chr7	+	888	6	FSM	ENSMUSG00000078681.11	ENSMUST00000206517.2	905	6	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTGAACCACGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	65343232	65351641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65343318_65343598_65343692_65344917_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUSG00000078681.11_2	chr7	+	988	6	FSM	ENSMUSG00000078681.11	ENSMUST00000107495.5	1003	6	6	9	6	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGACAACCCAGAACTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	65343170	65351652	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65343318_65343598_65343692_65344890_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUSG00000078681.11_5	chr7	+	861	5	FSM	ENSMUSG00000078681.11	ENST00000347970.7	876	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCACTTTGGGGCAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	65343206	65351681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65343318_65344917_65345076_65347443_65347619_65348839_65348916_65351340
ENSMUSG00000078684.9_0	chr3	+	6186	19	FSM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	0	4	0	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTAAGTCCACTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88682522	88732890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_88682582_88684290_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725073_88726971_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ENSMUSG00000078684.9_8	chr3	+	6128	18	ISM	ENSMUSG00000078684.9	ENSMUST00000135913.2	6190	19	1767	4	1767	-4	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGTAAGTCCACTTTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88684289	88732890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_88684822_88691614_88691807_88695643_88695746_88696664_88696706_88702770_88702795_88706921_88707026_88715213_88715410_88715859_88715950_88717975_88718145_88719320_88719466_88720990_88721142_88722938_88723056_88723316_88725073_88726971_88727094_88727354_88729107_88730848_88731105_88731656_88731842_88732696
ENSMUSG00000078695.9_0	chr11	+	544	4	FSM	ENSMUSG00000078695.9	ENSMUST00000107584.8	546	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97576651	97579445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97576691_97577008_97577042_97577326_97577447_97579093
ENSMUSG00000078695.9_1	chr11	+	721	3	FSM	ENSMUSG00000078695.9	ENSMUST00000107583.3	737	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAACTGTTTCTGTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	97576792	97579445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_97577042_97577326_97577447_97579093
ENSMUSG00000078713.9_0	chr4	-	620	2	FSM	ENSMUSG00000078713.9	ENSMUST00000107810.3	639	2	9	10	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGAAAGCGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45108105	45105217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45105645_45107912
ENSMUSG00000078713.9_1	chr4	-	662	3	FSM	ENSMUSG00000078713.9	ENSMUST00000107808.3	679	3	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAGAAAGCGTGGTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45108097	45105217	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45105645_45106838_45106889_45107912
ENSMUSG00000078713.9_2	chr4	-	682	2	FSM	ENSMUSG00000078713.9	ENST00000401811.3	698	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACAGTCTATATTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	45108100	45105249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_45105645_45107813
ENSMUSG00000078762.11_0	chr7	-	2166	19	FSM	ENSMUSG00000078762.11	ENSMUST00000019697.9	2187	19	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCAAAGAAAGCACTGCC	NA	NA	NA	NA	NA	NA	NA	NA	30364405	30353147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30353481_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357170_30357262_30357344_30357927_30358091_30358277_30358409_30358487_30358552_30358713_30358839_30358964_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUSG00000078765.12_0	chr7	+	739	7	FSM	ENSMUSG00000078765.12	ENSMUST00000166960.8	747	7	0	8	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTTTGTCAATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30262725	30264771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30262775_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUSG00000078765.12_1	chr7	+	873	8	FSM	ENSMUSG00000078765.12	ENSMUST00000043273.16	884	8	4	7	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262749	30264783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_2	chr7	+	741	7	FSM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	36	4	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262785	30264783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUSG00000078765.12_4	chr7	+	857	8	FSM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262774	30264783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30262834_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078765.12_8	chr7	+	688	6	ISM	ENSMUSG00000078765.12	ENSMUST00000163654.8	781	7	209	16	178	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTTTGTCAATCAAGG	NA	NA	NA	NA	NA	NA	NA	NA	30262958	30264771	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264519
ENSMUSG00000078765.12_9	chr7	+	798	7	ISM	ENSMUSG00000078765.12	ENSMUST00000167361.8	860	8	182	3	176	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAAGGTCTGTGGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262956	30264783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519
ENSMUSG00000078768.3_0	chr7	-	1687	4	FSM	ENSMUSG00000078768.3	ENSMUST00000088785.6	1709	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACGTAACAATCTGTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	29789938	29776769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29778044_29780515_29780643_29786524_29786585_29789712
ENSMUSG00000078771.11_0	chr11	-	1444	2	FSM	ENSMUSG00000078771.11	ENSMUST00000103236.4	1463	2	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAAAGCTGACTATGTA	NA	NA	NA	NA	NA	NA	NA	NA	79421403	79417393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79418629_79421194
ENSMUSG00000078771.11_2	chr11	-	2270	2	FSM	ENSMUSG00000078771.11	ENSMUST00000170799.8	2289	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACTTTAGAACAAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	79421425	79417402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_79419442_79421194
ENSMUSG00000078773.12_0	chr4	+	2379	4	FSM	ENSMUSG00000078773.12	ENSMUST00000095145.12	2403	4	22	2	-8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGTATATATTGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	11558963	11585742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11583676
ENSMUSG00000078773.12_1	chr4	+	645	4	FSM	ENSMUSG00000078773.12	ENSMUST00000108306.9	652	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCATATTTACGTACGAT	NA	NA	NA	NA	NA	NA	NA	NA	11558948	11578950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11578633
ENSMUSG00000078773.12_2	chr4	+	2870	15	FSM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	11558971	11615805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11559014_11563326_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ENSMUSG00000078773.12_8	chr4	+	2824	14	ISM	ENSMUSG00000078773.12	ENSMUST00000070755.13	2870	15	4359	0	4359	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGTGTGTATCCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	11563330	11615805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_11563478_11569820_11569933_11593620_11593816_11595666_11595940_11597831_11597995_11599675_11599902_11601550_11601759_11604865_11605006_11606045_11606337_11609293_11609470_11610303_11610566_11612371_11612439_11612617_11612819_11615442
ENSMUSG00000078773.12_9	chr4	+	570	3	ISM	ENSMUSG00000078773.12	ENSMUST00000108306.9	652	4	4388	7	4365	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCATATTTACGTACGAT	NA	NA	NA	NA	NA	NA	NA	NA	11563336	11578950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_11563478_11569820_11569933_11578633
ENSMUSG00000078776.10_0	chr7	+	7900	19	FSM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	2	-7	2	7	multi-exon	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACAGAGTGTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	27829242	27864227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27829304_27830843_27831194_27836487_27837059_27839164_27839770_27841647_27842210_27843256_27843850_27846045_27846632_27846740_27846941_27850077_27850220_27852142_27852481_27852716_27853291_27853613_27854231_27854568_27855113_27855951_27856521_27856959_27857534_27858761_27858962_27862015_27862400_27863693_27863966_27864069
ENSMUSG00000078776.10_2	chr7	+	7837	18	ISM	ENSMUSG00000078776.10	ENSMUST00000150948.2	7895	19	1605	-7	1605	7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACACAGAGTGTGTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	27830845	27864227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_27831194_27836487_27837059_27839164_27839770_27841647_27842210_27843256_27843850_27846045_27846632_27846740_27846941_27850077_27850220_27852142_27852481_27852716_27853291_27853613_27854231_27854568_27855113_27855951_27856521_27856959_27857534_27858761_27858962_27862015_27862400_27863693_27863966_27864069
ENSMUSG00000078779.5_1	chr7	+	3419	5	FSM	ENSMUSG00000078779.5	ENSMUST00000205701.2	3437	5	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGCAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	27538038	27555852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27538135_27542259_27542313_27543709_27543837_27545828_27545928_27552808
ENSMUSG00000078779.5_2	chr7	+	3323	4	FSM	ENSMUSG00000078779.5	ENSMUST00000108331.3	1962	4	-20	-1341	-20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAGCAAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	27542259	27555852	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_27542313_27543709_27543837_27545828_27545928_27552808
ENSMUSG00000078784.9_1	chr3	-	422	4	FSM	ENSMUSG00000078784.9	ENSMUST00000185384.7	435	4	4	9	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTTATTTCTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14676341	14671352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_14671469_14672236_14672354_14674600_14674718_14676269
ENSMUSG00000078784.9_2	chr3	-	347	3	ISM	ENSMUSG00000078784.9	ENSMUST00000108365.4	559	4	1567	4	1567	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACTTTATTTCTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	14674714	14671352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_14671469_14672236_14672354_14674600
ENSMUSG00000078784.9_3	chr3	-	1113	2	ISM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	1607	6	1567	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACTTTATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14674714	14671354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_14672354_14674600
ENSMUSG00000078784.9_4	chr3	-	1168	3	FSM	ENSMUSG00000078784.9	ENSMUST00000186870.7	1174	3	0	6	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAACTTTATTTCTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	14676321	14671354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_14672354_14674600_14674718_14676269
ENSMUSG00000078786.10_0	chr7	+	1745	7	FSM	ENSMUSG00000078786.10	ENSMUST00000179391.8	1748	7	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGGGAGACTTGGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	26895205	26903742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180
ENSMUSG00000078786.10_1	chr7	+	7230	8	FSM	ENSMUSG00000078786.10	ENSMUST00000108379.8	7247	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTACAGTGTTGTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	26895214	26909603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901963_26902051_26902123_26903180_26903437_26903803
ENSMUSG00000078786.10_2	chr7	+	7212	8	NNC	ENSMUSG00000078786.10	novel	7247	8	NA	NA	25	-9	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGCTACAGTGTTGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	26895230	26909602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_26895533_26896330_26896792_26899978_26900048_26900444_26900570_26901832_26901962_26902051_26902123_26903180_26903437_26903803
ENSMUSG00000078789.10_0	chr11	-	2648	2	FSM	ENSMUSG00000038268.5	ENSMUST00000071562.3	2670	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGAGTGGTCTGTAGGCC	NA	NA	NA	NA	NA	NA	NA	NA	75069645	75066773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75069214_75069437
ENSMUSG00000078789.10_1	chr11	-	2114	13	FSM	ENSMUSG00000078789.10	ENSMUST00000044949.11	2139	13	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	326	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCAAGGACACATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	75081331	75068479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_75069214_75069750_75069858_75069998_75070140_75070551_75070631_75071386_75071488_75071613_75071771_75072118_75072188_75074027_75074150_75074294_75074453_75074993_75075116_75076610_75076675_75076788_75076942_75081224
ENSMUSG00000078812.11_2	chr11	-	1324	6	FSM	ENSMUSG00000078812.11	ENSMUST00000108613.10	1343	6	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	20938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAAGCCCCCAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	69812201	69807553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811988
ENSMUSG00000078812.11_4	chr11	-	1421	7	FSM	ENSMUSG00000078812.11	ENSMUST00000043419.10	1437	7	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATGAAGCCCCCAACTCA	NA	NA	NA	NA	NA	NA	NA	NA	69812204	69807553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69808168_69808253_69808328_69808422_69808555_69808742_69808848_69809976_69810163_69811166_69811261_69811988
ENSMUSG00000078813.4_0	chr7	-	2197	4	FSM	ENSMUSG00000078813.4	ENSMUST00000019878.8	2222	4	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCAAGCAGGCACCATCA	NA	NA	NA	NA	NA	NA	NA	NA	3668819	3663101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3664360_3665769_3666024_3666680_3666861_3668314
ENSMUSG00000078816.11_0	chr7	+	2260	17	FSM	ENSMUSG00000078816.11	ENST00000683513.1	2274	17	11	3	11	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	492	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTCCCCAGTGCTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	3352048	3378867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3352476_3352821_3352854_3353859_3353943_3359079_3359192_3359351_3359484_3360904_3361062_3362213_3362349_3362648_3362737_3363027_3363058_3367375_3367529_3368046_3368236_3370855_3370948_3371032_3371096_3371971_3372111_3375931_3376013_3378343_3378485_3378661
ENSMUSG00000078817.5_0	chr7	-	3137	10	FSM	ENSMUSG00000078817.5	ENST00000391773.6	3148	10	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTAAGGAGAACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3298146	3271147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3271235_3273877_3274049_3277021_3277193_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459_3290141_3293958_3294040_3297880
ENSMUSG00000078817.5_1	chr7	-	2963	9	FSM	ENSMUSG00000078817.5	ENST00000391775.7	2977	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGTAAGGAGAACCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	3298143	3271147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_3271235_3273877_3274049_3279599_3279771_3281716_3281888_3282504_3282676_3283783_3283951_3288459_3290141_3293958_3294040_3297880
ENSMUSG00000078851.5_0	chr11	+	2126	1	FSM	ENSMUSG00000078851.5	ENSMUST00000108817.5	2146	1	11	9	11	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGCTACACAGGCGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	58845521	58847647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58845500_58847600
ENSMUSG00000078861.9_0	chr2	-	1349	3	FSM	ENSMUSG00000078861.9	ENSMUST00000108923.2	1372	3	16	7	16	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAAACCAAATTTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	177720253	177710289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_177711409_177711615_177711743_177720150
ENSMUSG00000078862.11_0	chr2	-	877	5	FSM	ENSMUSG00000078862.11	ENSMUST00000108932.8	888	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTCTGTGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	177599077	177577792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_177578350_177589962_177590024_177590229_177590357_177595474_177595530_177599000
ENSMUSG00000078862.11_1	chr2	-	801	4	ISM	ENSMUSG00000078862.11	ENSMUST00000108932.8	888	5	3551	7	-53	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTTTCTGTGTTTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	177595530	177577792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_177578350_177589962_177590024_177590229_177590357_177595474
ENSMUSG00000078862.11_2	chr2	-	723	3	ISM	ENSMUSG00000078862.11	ENSMUST00000178829.8	1665	4	-43	2144	-43	-3	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCAGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	177595520	177589473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_177590024_177590229_177590357_177595474
ENSMUSG00000078862.11_3	chr2	-	764	4	FSM	ENSMUSG00000078862.11	ENSMUST00000108928.2	767	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCAGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	177599032	177589473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_177590024_177590229_177590357_177595474_177595530_177599000
ENSMUSG00000078862.11_4	chr2	-	678	2	ISM	ENSMUSG00000078862.11	ENSMUST00000178829.8	1665	4	5120	2144	5120	-3	internal_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGTCAGCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	177590357	177589473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_177590024_177590229
ENSMUSG00000078864.11_0	chr2	+	1043	3	FSM	ENSMUSG00000078864.11	ENSMUST00000108942.5	1074	3	20	11	20	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTAACTAGCTTTGCAGG	NA	NA	NA	NA	NA	NA	NA	NA	177409856	177412254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_177409964_177410168_177410230_177411379
ENSMUSG00000078866.11_0	chr2	+	791	4	FSM	ENSMUSG00000078866.11	ENSMUST00000099002.10	794	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCATTGCTATTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	177156525	177169919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_177156642_177165078_177165206_177165410_177165472_177169432
ENSMUSG00000078867.10_0	chr2	-	1389	4	FSM	ENSMUSG00000078867.10	ENSMUST00000108955.2	1415	4	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAAAATTTAAAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	177090103	177079894	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_177081015_177081219_177081347_177086489_177086545_177090016
ENSMUSG00000078867.10_1	chr2	-	1308	3	ISM	ENSMUSG00000078867.10	ENSMUST00000128657.8	1077	4	-53	973	-53	-12	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATTTAAAACAATTCATA	NA	NA	NA	NA	NA	NA	NA	NA	177086545	177079889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_177081015_177081219_177081347_177086489
ENSMUSG00000078877.12_0	chr2	+	1202	4	FSM	ENSMUSG00000078877.12	ENSMUST00000118012.9	1213	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACACTGTGAGTTCTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	176490413	176500409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176490512_176493973_176494029_176499154_176499282_176499487
ENSMUSG00000078877.12_1	chr2	+	2488	3	ISM	ENSMUSG00000078877.12	ENSMUST00000132883.8	2505	4	5132	11	3	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAACTAGTATGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	176499157	176503005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_176499282_176499487_176499549_176500702
ENSMUSG00000078879.11_0	chr2	+	1254	3	FSM	ENSMUSG00000078879.11	ENSMUST00000121956.8	1271	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATCAATACTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	176362323	176371659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176362453_176370328_176370456_176370661
ENSMUSG00000078880.11_0	chr2	-	4393	5	FSM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	21	-2786	21	2786	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	176328090	176311848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514_176324570_176328032
ENSMUSG00000078880.11_1	chr2	-	4325	4	ISM	ENSMUSG00000078880.11	ENSMUST00000108990.9	1628	5	3552	-2786	3552	2786	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	176324559	176311848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_176315941_176317097_176317159_176317363_176317491_176324514
ENSMUSG00000078880.11_2	chr2	-	1438	4	FSM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	14	6	-11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTATAATCAGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	176328122	176315992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_176317159_176317363_176317491_176324514_176324570_176328032
ENSMUSG00000078880.11_3	chr2	-	1349	3	ISM	ENSMUSG00000078880.11	ENSMUST00000119149.8	1458	4	3566	6	3541	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTATAATCAGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	176324570	176315992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_176317159_176317363_176317491_176324514
ENSMUSG00000078881.11_0	chr2	-	4391	5	NIC	ENSMUSG00000078881.11	novel	1497	4	NA	NA	48	2786	combination_of_known_junctions	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	176178518	176162284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_176166377_176167533_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUSG00000078881.11_2	chr2	-	1588	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	7	-137	7	137	multi-exon	FALSE	canonical	NA	NA	NA	NA	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTAAACATAATGGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	176178559	176166285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178462
ENSMUSG00000078881.11_3	chr2	-	1506	3	ISM	ENSMUSG00000078881.11	ENSMUST00000120959.8	1458	4	3560	-151	-53	151	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACACCATGACTGTA	NA	NA	NA	NA	NA	NA	NA	NA	176175006	176166271	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_176167595_176167799_176167927_176174950
ENSMUSG00000078881.11_4	chr2	-	544	4	FSM	ENSMUSG00000078881.11	ENSMUST00000120521.2	559	4	9	6	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTTTAAATCAAGCCTAG	NA	NA	NA	NA	NA	NA	NA	NA	176178567	176167309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_176167595_176167799_176167927_176174950_176175006_176178490
ENSMUSG00000078886.13_1	chr2	+	1454	4	FSM	ENSMUSG00000078886.13	ENSMUST00000109007.8	1621	4	4	163	4	-163	multi-exon	FALSE	canonical	NA	NA	NA	NA	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATCAGTGTAAGAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	175757127	175769265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175757228_175760682_175760738_175767761_175767889_175768093
ENSMUSG00000078886.13_3	chr2	+	1352	3	ISM	ENSMUSG00000078886.13	ENSMUST00000109008.4	1497	4	-53	1355	-53	-166	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAATCAGTGTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	175760681	175769262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_175760738_175767761_175767889_175768093
ENSMUSG00000078887.11_0	chr2	+	1426	4	FSM	ENSMUSG00000078887.11	ENSMUST00000109011.8	1445	4	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTATGTTAACATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	175661021	175671440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175661175_175664841_175664897_175670021_175670149_175670349
ENSMUSG00000078887.11_1	chr2	+	1945	6	NNC	ENSMUSG00000078887.11	novel	1665	4	NA	NA	26	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGTAACTAGTATGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	175661037	175673030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175661175_175664841_175664897_175666200_175666303_175670021_175670149_175670349_175670411_175671567
ENSMUSG00000078889.12_1	chr2	-	3432	3	FSM	ENSMUSG00000078889.12	ENSMUST00000109020.9	3438	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGTGGTATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	175592886	175581155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175584326_175584530_175584658_175592751
ENSMUSG00000078891.5_0	chr2	+	2299	3	NNC	ENSMUSG00000078891.5	novel	622	2	NA	NA	-338	406	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAGCCTTTAAACATTT	NA	NA	NA	NA	NA	NA	NA	NA	175839242	175842905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175839364_175839574_175839642_175840794
ENSMUSG00000078894.10_0	chr2	+	3811	5	FSM	ENSMUSG00000078894.10	ENSMUST00000099009.9	3823	5	4	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTATTTTAAAAAAAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	175968365	175982113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175968480_175971917_175971973_175977111_175977239_175977443_175977505_175978659
ENSMUSG00000078896.12_0	chr2	+	1240	3	FSM	ENSMUSG00000078896.12	ENSMUST00000109042.10	1271	3	23	8	23	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAATCAATACTGTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	175311800	175321122	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175311916_175319791_175319919_175320124
ENSMUSG00000078897.11_0	chr2	-	4398	5	FSM	ENSMUSG00000078897.11	ENSMUST00000109045.9	1659	5	47	-2786	22	2786	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175277553	175261306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972_175274028_175277490
ENSMUSG00000078897.11_1	chr2	-	4334	4	FSM	ENSMUSG00000078897.11	ENSMUST00000109046.10	1497	4	-51	-2786	-51	2786	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175274026	175261306	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175265399_175266555_175266617_175266821_175266949_175273972
ENSMUSG00000078897.11_2	chr2	-	1435	4	FSM	ENSMUSG00000078897.11	ENSMUST00000152941.2	1198	4	-2	-235	-2	235	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTATAATCAGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	175277577	175265450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175266617_175266821_175266949_175273972_175274028_175277490
ENSMUSG00000078897.11_3	chr2	-	1352	3	ISM	ENSMUSG00000078897.11	ENSMUST00000109046.10	1497	4	-53	1355	-53	238	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAATCAGTGTAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	175274028	175265447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_175266617_175266821_175266949_175273972
ENSMUSG00000078898.10_0	chr2	+	749	3	FSM	ENSMUSG00000078898.10	ENSMUST00000131676.8	1272	3	48	475	22	-475	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTACATCTCTATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	175214276	175223104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175214367_175222239_175222367_175222572
ENSMUSG00000078899.10_0	chr2	-	4394	5	FSM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	6	2	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175179984	175163749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415_175176471_175179925
ENSMUSG00000078899.10_1	chr2	-	4324	4	ISM	ENSMUSG00000078899.10	ENSMUST00000121393.9	4402	5	3531	2	3531	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175176459	175163749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_175167842_175168998_175169060_175169264_175169392_175176415
ENSMUSG00000078899.10_2	chr2	-	1589	4	NIC	ENSMUSG00000078899.10	novel	4402	5	NA	NA	-26	-1208	intron_retention	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGGAGAGAAACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	175180016	175167743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_-_175169060_175169264_175169392_175176415_175176471_175179925
ENSMUSG00000078901.9_0	chr2	+	635	4	NNC	ENSMUSG00000078901.9	novel	3382	3	NA	NA	-62	417	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTTTGTGAAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	175116855	175129015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175116997_175125090_175125218_175125422_175125484_175128709
ENSMUSG00000078901.9_1	chr2	+	3429	3	FSM	ENSMUSG00000078901.9	ENSMUST00000109051.8	3382	3	-53	6	-53	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGTGGTATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	175116864	175128592	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175116997_175125090_175125218_175125422
ENSMUSG00000078903.11_0	chr2	-	1944	6	FSM	ENSMUSG00000078903.11	ENSMUST00000109056.8	1956	6	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGTATGGTAAAGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	175048704	175036712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175038181_175039337_175039399_175039599_175039727_175043445_175043548_175044851_175044907_175048573
ENSMUSG00000078903.11_1	chr2	-	1424	4	FSM	ENSMUSG00000078903.11	ENSMUST00000109055.2	965	4	-32	-427	-14	427	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTATGTTAACATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	175048724	175038307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175039399_175039599_175039727_175044851_175044907_175048573
ENSMUSG00000078908.11_0	chr8	+	3454	6	FSM	ENSMUSG00000078908.11	ENSMUST00000179926.9	3470	6	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCACTAGAAGAGCATT	NA	NA	NA	NA	NA	NA	NA	NA	114362228	114370432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_114362341_114362743_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ENSMUSG00000078908.11_1	chr8	+	4977	5	FSM	ENSMUSG00000078908.11	ENSMUST00000035777.10	4998	5	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTACCCTCTCAGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	114362481	114371805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_114362902_114364372_114364718_114365166_114365987_114366318_114366467_114368561
ENSMUSG00000078920.4_0	chr11	+	1761	3	FSM	ENSMUSG00000078920.4	ENSMUST00000109202.3	1773	3	4	8	4	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAACAAGATGAGACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	48967417	48987793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48967490_48977860_48977972_48986215
ENSMUSG00000078920.4_1	chr11	+	1680	2	FSM	ENSMUSG00000078920.4	ENSMUST00000046704.7	1690	2	-2	12	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTAATAACAAGATGAG	NA	NA	NA	NA	NA	NA	NA	NA	48977863	48987787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_48977972_48986215
ENSMUSG00000078921.4_0	chr11	-	2785	2	FSM	ENSMUSG00000078921.4	ENSMUST00000046745.7	2810	2	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAACACTGAGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	48955013	48948027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48950589_48954789
ENSMUSG00000078922.10_0	chr11	-	2809	2	FSM	ENSMUSG00000078922.10	ENSMUST00000068063.4	2823	2	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTAACACTGAGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	48883078	48876160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_48878722_48882830
ENSMUSG00000078923.11_0	chr2	-	2026	4	FSM	ENSMUSG00000078923.11	ENSMUST00000109207.10	2041	4	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	6805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGGCAGGCTGTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	167474005	167449562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167473859
ENSMUSG00000078923.11_6	chr2	-	1810	4	FSM	ENSMUSG00000078923.11	ENST00000557021.5	1811	4	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGCTCGGTGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167473925	167449769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167451168_167452223_167452350_167459748_167459969_167473859
ENSMUSG00000078931.5_0	chr8	-	1292	2	FSM	ENSMUSG00000078931.5	ENSMUST00000055316.10	1306	2	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAGAAAAAAAAAGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107775232	107773151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107773904_107774692
ENSMUSG00000078941.10_0	chr13	+	1283	5	FSM	ENSMUSG00000078941.10	ENSMUST00000022135.15	1298	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGATACACATCTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	100787495	100802861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100787954_100790698_100790792_100800402_100800462_100800558_100800705_100802334
ENSMUSG00000078941.10_11	chr13	+	1213	3	FSM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	11	6	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATTCTTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	100788125	100792561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100788226_100790698_100790792_100791541
ENSMUSG00000078941.10_15	chr13	+	1113	2	ISM	ENSMUSG00000052293.15	ENSMUST00000167256.8	1230	3	2584	6	2565	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATTCTTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	100790698	100792561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_100790792_100791541
ENSMUSG00000078941.10_4	chr13	+	1183	3	FSM	ENSMUSG00000078941.10	ENSMUST00000190729.2	1184	3	-4	5	-4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGATTCTTGGTACTTT	NA	NA	NA	NA	NA	NA	NA	NA	100787883	100792561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100787954_100790698_100790792_100791541
ENSMUSG00000078945.11_0	chr13	-	4700	15	FSM	ENSMUSG00000078945.11	ENSMUST00000067975.12	4709	15	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCTTTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100333655	100280579	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_100281232_100285215_100285381_100288577_100288665_100289001_100289155_100291362_100291531_100296628_100298873_100299349_100299408_100302976_100303059_100314754_100314855_100315856_100315977_100319412_100319465_100320264_100320347_100323900_100324001_100325338_100325911_100333590
ENSMUSG00000078949.3_0	chr2	+	1070	5	FSM	ENSMUSG00000078949.3	ENSMUST00000109416.3	1094	5	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGACATCTTTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	163334261	163344532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163334673_163337608_163337728_163340214_163340348_163341734_163341851_163344241
ENSMUSG00000078956.4_3	chr2	-	1423	2	FSM	ENSMUSG00000078956.4	ENSMUST00000209603.2	1437	2	3	11	3	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGACAGAGAGAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	160461888	160447926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_160449243_160461781
ENSMUSG00000078965.6_0	chr11	-	1194	1	FSM	ENSMUSG00000078965.6	ENSMUST00000180654.2	1002	1	-18	-174	-18	174	mono-exon	FALSE	NA	NA	NA	NA	NA	558	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20286031	20284837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_20284800_20286000
ENSMUSG00000078970.6_0	chr11	+	1983	8	FSM	ENSMUSG00000078970.6	ENSMUST00000046955.7	2002	8	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	385	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTTGGAGGCGTTGA	NA	NA	NA	NA	NA	NA	NA	NA	17161936	17183796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_17162147_17169013_17169115_17172196_17172328_17174548_17174651_17177160_17177277_17178140_17178276_17179768_17179867_17182706
ENSMUSG00000078972.2_0	chr2	+	1287	2	FSM	ENSMUSG00000078972.2	ENST00000374375.1	1298	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACAACCAGGGCTACAC	NA	NA	NA	NA	NA	NA	NA	NA	155783436	155796572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_155784651_155796499
ENSMUSG00000078974.11_0	chr11	-	736	4	FSM	ENSMUSG00000078974.11	ENSMUST00000166950.8	754	4	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATTTATCAAATTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	16458469	16451640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458103
ENSMUSG00000078974.11_3	chr11	-	688	4	FSM	ENSMUSG00000078974.11	ENSMUST00000109642.8	691	4	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGGTCTCAGGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	16458166	16451389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458099
ENSMUSG00000078974.11_4	chr11	-	360	3	ISM	ENSMUSG00000078974.11	ENSMUST00000109641.2	450	4	1603	-6	1603	6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAGACATTTATCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	16456466	16451644	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_16451808_16454735_16454839_16456372
ENSMUSG00000078974.11_5	chr11	-	766	4	FSM	ENSMUSG00000078974.11	ENSMUST00000178855.8	779	4	5	8	5	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAACAGACATTTATCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	16458479	16451645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16451808_16454735_16454839_16456372_16456473_16458078
ENSMUSG00000078994.10_0	chr13	-	2048	4	FSM	ENSMUSG00000078994.10	ENSMUST00000109732.3	2056	4	3	5	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATTCCTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67547883	67537427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67539184_67544162_67544259_67544748_67544876_67547814
ENSMUSG00000078994.10_2	chr13	-	1981	3	ISM	ENSMUSG00000078994.10	ENSMUST00000109732.3	2056	4	3009	5	2985	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCATTCCTTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	67544877	67537427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67539184_67544162_67544259_67544748
ENSMUSG00000079003.4_0	chr8	+	2238	5	FSM	ENSMUSG00000079003.4	ENSMUST00000095228.5	2265	5	11	16	11	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAACTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84724140	84727022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84725195_84725571_84725870_84725952_84726050_84726144_84726257_84726345
ENSMUSG00000079011.10_0	chr8	-	1431	10	FSM	ENSMUSG00000079011.10	ENSMUST00000127757.8	1445	10	9	5	-1	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTAAAGAAAGAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	75560566	75317619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_75318084_75321673_75321759_75327790_75328042_75328156_75328179_75366739_75366847_75502999_75503053_75554549_75554685_75554894_75555049_75560078_75560152_75560479
ENSMUSG00000079011.10_1	chr8	-	1344	9	ISM	ENSMUSG00000079011.10	ENSMUST00000127757.8	1445	10	424	5	414	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTAAAGAAAGAGATGAC	NA	NA	NA	NA	NA	NA	NA	NA	75560151	75317619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_75318084_75321673_75321759_75327790_75328042_75328156_75328179_75366739_75366847_75502999_75503053_75554549_75554685_75554894_75555049_75560078
ENSMUSG00000079017.4_0	chr12	-	461	4	FSM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGCTGTGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103409939	103408427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103408643_103409090_103409253_103409740_103409771_103409885
ENSMUSG00000079017.4_1	chr12	-	406	3	ISM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	170	2	170	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGCTGTGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103409769	103408427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_103408643_103409090_103409253_103409740
ENSMUSG00000079017.4_2	chr12	-	368	2	ISM	ENSMUSG00000079017.4	ENSMUST00000055071.9	463	4	696	2	696	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGCTGTGGTGGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	103409243	103408427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_103408643_103409090
ENSMUSG00000079018.11_0	chr15	-	785	3	ISM	ENSMUSG00000079018.11	ENSMUST00000179762.8	838	4	294	4	269	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAATCTCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74920368	74916869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_74917460_74919201_74919319_74920290
ENSMUSG00000079018.11_1	chr15	-	836	4	FSM	ENSMUSG00000079018.11	ENSMUST00000065408.16	844	4	0	8	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAATCTCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74920679	74916869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74917460_74919201_74919319_74920290_74920374_74920633
ENSMUSG00000079018.11_2	chr15	-	834	4	FSM	ENSMUSG00000079018.11	ENSMUST00000179762.8	838	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAAATCTCTGTTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	74920662	74916869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74917460_74919201_74919319_74920290_74920389_74920633
ENSMUSG00000079020.10_0	chr15	-	7471	8	FSM	ENSMUSG00000079020.10	ENSMUST00000151288.8	7509	8	30	8	30	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCAGATGACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	73496563	73449280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459393_73459574_73461234_73461424_73477290_73477926_73496174
ENSMUSG00000079020.10_1	chr15	-	4649	8	FSM	ENSMUSG00000079020.10	ENSMUST00000054266.13	4664	8	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGAACGCTGTGTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	73496578	73452141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_73453980_73456186_73456399_73457136_73457237_73457867_73458935_73459369_73459574_73461234_73461424_73477290_73477926_73496174
ENSMUSG00000079029.3_0	chr12	-	1830	2	FSM	ENSMUSG00000079029.3	ENSMUST00000101168.4	1840	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTTCTGAAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	88241265	88237414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_88239059_88241079
ENSMUSG00000079031.2_0	chr12	+	1842	2	FSM	ENSMUSG00000079031.2	ENSMUST00000110149.2	1851	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAGATTAATGC	NA	NA	NA	NA	NA	NA	NA	NA	87783355	87787446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87783537_87785785
ENSMUSG00000079034.3_0	chr12	+	1846	2	FSM	ENSMUSG00000079034.3	ENSMUST00000110152.3	1873	2	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAATATCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	87561099	87565023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87561276_87563353
ENSMUSG00000079036.11_0	chr12	-	3848	6	FSM	ENSMUSG00000079036.11	ENSMUST00000162961.8	3857	6	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGTGTGGGTGTTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	87490605	87472943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87476041_87478169_87478364_87480888_87480980_87485166_87485330_87487075_87487185_87490411
ENSMUSG00000079036.11_3	chr12	-	396	1	FSM	ENSMUSG00000079036.11	ENSMUST00000185301.2	408	1	6	6	6	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGAGCGACCAGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	87490682	87490286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_87490300_87490700
ENSMUSG00000079037.10_0	chr2	+	2174	3	FSM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGAACACCTGGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	131751849	131780341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_131751924_131754114_131754213_131778339
ENSMUSG00000079037.10_5	chr2	+	2098	2	ISM	ENSMUSG00000079037.10	ENSMUST00000091288.13	2184	3	2269	8	2269	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGAACACCTGGCGGGG	NA	NA	NA	NA	NA	NA	NA	NA	131754116	131780341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_131754213_131778339
ENSMUSG00000079043.4_0	chr2	-	3001	2	FSM	ENSMUSG00000079043.4	ENSMUST00000110262.3	3015	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTGATCCACAAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	130471941	130455767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130458663_130471835
ENSMUSG00000079043.4_1	chr2	-	2898	1	FSM	ENSMUSG00000079043.4	ENSMUST00000179273.2	2424	1	-76	-398	-76	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGATCCACAAAGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	130458664	130455766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_130455800_130458700
ENSMUSG00000079049.10_1	chr13	-	1620	7	FSM	ENSMUSG00000079049.10	ENSMUST00000021834.11	1633	7	2	11	2	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	33082192	33065427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_33066209_33067859_33068028_33068203_33068347_33070136_33070255_33072854_33072993_33080913_33081090_33082096
ENSMUSG00000079055.11_0	chr12	-	2809	6	FSM	ENSMUSG00000079055.11	ENST00000534137.5	2821	6	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCGCCGGAACAAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	81362860	81246266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81246642_81249016_81249293_81250827_81250928_81251665_81251791_81260837_81260944_81361033
ENSMUSG00000079057.5_0	chr8	-	3775	11	FSM	ENSMUSG00000079057.5	ENSMUST00000095328.6	3808	11	26	7	26	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTCATTCTTGGGACAT	NA	NA	NA	NA	NA	NA	NA	NA	45786227	45757987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_45760146_45761416_45761597_45761693_45761829_45763219_45763323_45768571_45768758_45770703_45770831_45773127_45773198_45773563_45773755_45774739_45774826_45781149_45781263_45785801
ENSMUSG00000079083.4_0	chr9	-	3216	1	FSM	ENSMUSG00000079083.4	ENSMUST00000110582.4	3223	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTTTCCTTCCTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	13245827	13242611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_13242600_13245800
ENSMUSG00000079084.13_12	chr9	+	2614	8	FSM	ENSMUSG00000079084.13	ENST00000530203.2	2675	8	57	4	57	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTAAGTGTGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13251515	13292861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079084.13_16	chr9	+	1725	7	FSM	ENSMUSG00000079084.13	ENST00000679696.1	1746	7	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTAAATATGAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	13252859	13292889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079084.13_3	chr9	+	666	5	FSM	ENSMUSG00000079084.13	ENST00000680532.1	676	5	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAAAGGTAAGGTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	13248887	13282061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13248988_13262360_13262454_13266811_13266937_13272649_13272821_13281884
ENSMUSG00000079084.13_4	chr9	+	2514	9	FSM	ENSMUSG00000079084.13	ENST00000680763.1	2524	9	6	4	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTAAGTGTGTATTCT	NA	NA	NA	NA	NA	NA	NA	NA	13248887	13292861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_13248968_13251695_13252424_13252850_13253056_13262360_13262454_13266811_13266937_13272649_13272821_13281884_13282071_13289700_13290076_13292310
ENSMUSG00000079092.5_0	chr13	-	831	5	FSM	ENSMUSG00000079092.5	ENSMUST00000110594.4	842	5	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	13179964	13170716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_13170997_13171869_13172053_13173165_13173274_13176718_13176895_13179880
ENSMUSG00000079092.5_1	chr13	-	747	4	ISM	ENSMUSG00000079092.5	ENSMUST00000110594.4	842	5	3074	7	3025	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATATAAAAGTCTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	13176894	13170716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_13170997_13171869_13172053_13173165_13173274_13176718
ENSMUSG00000079104.5_0	chr12	+	1695	2	FSM	ENSMUSG00000079104.5	ENSMUST00000139049.2	1720	2	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	418	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAAGCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	57277208	57286654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_57277398_57285148
ENSMUSG00000079108.7_0	chr12	+	3626	16	FSM	ENSMUSG00000079108.7	ENSMUST00000218879.2	3642	16	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTTACCATTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	55276959	55310612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55277430_55286078_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ENSMUSG00000079108.7_14	chr12	+	2307	15	FSM	ENSMUSG00000079108.7	ENSMUST00000164243.2	2317	15	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGCATTGGTTGGTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	55286117	55309802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55286189_55287044_55287137_55288157_55288243_55292723_55292829_55294017_55294085_55294164_55294223_55296788_55296940_55298428_55298578_55298911_55299013_55299556_55299644_55302323_55302398_55302752_55302862_55304209_55304381_55307187_55307284_55308911
ENSMUSG00000079109.12_0	chr5	+	5456	15	FSM	ENSMUSG00000079109.12	ENSMUST00000148011.8	5482	15	16	10	16	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGGAAATTATGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	143846797	143870776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143846898_143848738_143848879_143850219_143850307_143850436_143850540_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079109.12_2	chr5	+	389	3	FSM	ENSMUSG00000079109.12	ENST00000394921.8	413	3	12	12	12	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	4088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATTAAAAAGGTAAATTC	NA	NA	NA	NA	NA	NA	NA	NA	143848748	143851609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143848879_143850219_143850307_143851437
ENSMUSG00000079109.12_5	chr5	+	2254	12	FSM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGACACACCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	143850271	143867969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143850307_143851437_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079109.12_8	chr5	+	2209	11	ISM	ENSMUSG00000079109.12	ENST00000644110.1	2262	12	1176	8	1176	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTGACACACCCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	143851447	143867969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_143851622_143853173_143853342_143854397_143854496_143856326_143856427_143858833_143858919_143860294_143860451_143862038_143862892_143864916_143865085_143865759_143865861_143865998_143866169_143867833
ENSMUSG00000079110.13_0	chr2	+	3178	24	FSM	ENSMUSG00000079110.13	ENSMUST00000028749.15	3186	24	2	6	-1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCTCCTTATTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	120294054	120335393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120294663_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120316813_120316958_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120325716_120325729_120326345_120326555_120327458_120327496_120329448_120329467_120331691_120331806_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000079110.13_10	chr2	+	2594	21	FSM	ENSMUSG00000079110.13	ENSMUST00000028748.14	2622	21	22	6	22	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATTCTCCTTATTAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	120307411	120335393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120307712_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120325716_120325729_120326345_120326555_120327458_120327496_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000079110.13_2	chr2	+	3124	23	NNC	ENSMUSG00000079110.13	novel	3186	24	NA	NA	-26	-1	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCTTATTAGCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	120294107	120335396	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_120294663_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120316813_120316958_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120326337_120326555_120327458_120327496_120329448_120329467_120331691_120331806_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000079110.13_5	chr2	+	2989	23	FSM	ENSMUSG00000079110.13	ENSMUST00000239364.2	3012	23	22	1	22	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTGACAAAAATGTGGC	NA	NA	NA	NA	NA	NA	NA	NA	120294155	120335323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120294663_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120316813_120316958_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120325716_120325729_120326345_120326555_120327458_120327496_120331691_120331806_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000079111.4_0	chr5	+	1811	5	FSM	ENSMUSG00000079111.4	ENSMUST00000110731.4	1829	5	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7590	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAACAGAATGTATGGTC	NA	NA	NA	NA	NA	NA	NA	NA	143389602	143407648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143389808_143398245_143398347_143403804_143403964_143405194_143405448_143406555
ENSMUSG00000079139.5_0	chr1	+	1344	1	FSM	ENSMUSG00000079139.5	ENSMUST00000110798.5	1231	1	50	-163	50	163	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATTGCAAAACTCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135159782	135161126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_135159800_135161100
ENSMUSG00000079144.8_0	chr1	+	3774	3	FSM	ENSMUSG00000079144.8	ENSMUST00000160822.3	3793	3	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGTATATGACAATATA	NA	NA	NA	NA	NA	NA	NA	NA	192850364	192860132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192850440_192850824_192850944_192856552
ENSMUSG00000079144.8_2	chr1	+	3760	2	FSM	ENSMUSG00000079144.8	ENSMUST00000178744.2	3782	2	14	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAGTATATGACAATATA	NA	NA	NA	NA	NA	NA	NA	NA	192855898	192860132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192856079_192856552
ENSMUSG00000079144.8_5	chr1	+	2244	2	FSM	ENSMUSG00000079144.8	ENSMUST00000110831.4	2257	2	7	6	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACCAAATGTCCTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	192855894	192858602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192856089_192856552
ENSMUSG00000079179.10_0	chr12	+	3978	4	FSM	ENSMUSG00000079179.10	ENSMUST00000178074.8	4006	4	20	8	-2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGATAAGAAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	3285523	3291402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3285930_3287284_3287413_3287590_3287661_3288028
ENSMUSG00000079179.10_2	chr12	+	2859	7	FSM	ENSMUSG00000079179.10	ENSMUST00000177896.8	2872	7	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTCACAAAAAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	3285530	3300369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_3287413_3287590_3287661_3288028_3288113_3288833_3289010_3291521_3291579_3297351_3297439_3299866
ENSMUSG00000079184.11_0	chr14	+	2923	14	FSM	ENSMUSG00000079184.11	ENSMUST00000116468.2	2939	14	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	447	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGAAATTTTCTACTAGT	NA	NA	NA	NA	NA	NA	NA	NA	56905712	56934879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_56906022_56909861_56910018_56911347_56912197_56913978_56914076_56916020_56916276_56922414_56922541_56922618_56922708_56925821_56925963_56926485_56926573_56928363_56928519_56930880_56931036_56933077_56933206_56934115_56934200_56934587
ENSMUSG00000079197.11_0	chr14	-	944	11	FSM	ENSMUSG00000079197.11	ENSMUST00000161807.8	962	11	11	7	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTACCTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55828533	55824904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828298
ENSMUSG00000079197.11_1	chr14	-	789	11	FSM	ENSMUSG00000079197.11	ENSMUST00000111378.10	795	11	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTACCTGTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	55828558	55824904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55825023_55825110_55825198_55825496_55825552_55825689_55825758_55825900_55825970_55826757_55826856_55826937_55826969_55827075_55827163_55827489_55827553_55827951_55827985_55828478
ENSMUSG00000079215.9_0	chr5	+	4076	4	FSM	ENSMUSG00000079215.9	ENSMUST00000111417.9	4092	4	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACAGGACCCTATGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	124939761	124965685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124939947_124940417_124940573_124961771_124961837_124962014
ENSMUSG00000079225.4_0	chr9	+	620	2	FSM	ENSMUSG00000079225.4	ENSMUST00000055820.7	638	2	3	15	3	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAACAGGAAAAGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81559653	81560715	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_81559913_81560354
ENSMUSG00000079225.4_1	chr9	+	687	1	FSM	ENSMUSG00000079225.4	ENSMUST00000183511.2	775	1	155	-67	155	67	mono-exon	FALSE	NA	NA	NA	NA	NA	279	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAGGACGAAGGCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	81559819	81560506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_81559800_81560500
ENSMUSG00000079242.3_0	chr15	+	1250	1	FSM	ENSMUSG00000079242.3	ENSMUST00000168646.2	1280	1	19	11	19	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89313810	89315060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_89313800_89315100
ENSMUSG00000079243.6_0	chr9	-	5822	3	FSM	ENSMUSG00000079243.6	ENSMUST00000111635.4	5839	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTATTTTGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	119852655	119842828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119845101_119845491_119848886_119852499
ENSMUSG00000079260.4_0	chr9	+	2906	2	FSM	ENSMUSG00000079260.4	ENSMUST00000111820.4	2921	2	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACCCACAAGGAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	114230181	114236338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_114230338_114233588
ENSMUSG00000079283.3_0	chr1	-	542	3	FSM	ENSMUSG00000079283.3	ENSMUST00000112025.3	565	3	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATCCAAAAGAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	138784579	138779732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138779912_138781308_138781411_138784318
ENSMUSG00000079316.11_0	chrX	-	1438	3	FSM	ENSMUSG00000079316.11	ENSMUST00000112091.9	1447	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	709	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTTGCAATGCTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	165262854	165240248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_165241340_165245310_165245339_165262535
ENSMUSG00000079317.11_0	chrX	+	1594	5	FSM	ENSMUSG00000079317.11	ENSMUST00000116495.8	1613	5	11	8	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCAAGAATGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	165223580	165236128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_165223836_165229786_165229899_165232783_165232929_165233624_165233711_165235132
ENSMUSG00000079317.11_22	chrX	+	1287	4	FSM	ENSMUSG00000079317.11	ENSMUST00000112192.8	1294	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCCAAGAATGTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	165223772	165236128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_165223836_165229786_165229899_165232783_165232900_165235132
ENSMUSG00000079334.9_0	chr9	+	2031	2	FSM	ENSMUSG00000079334.9	ENSMUST00000093785.6	2053	2	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTATGGCTGTGACAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107457330	107461242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107458135_107460015
ENSMUSG00000079334.9_2	chr9	+	1369	2	FSM	ENSMUSG00000079334.9	ENST00000443842.1	1378	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGGAGCTCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	107459739	107461188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_107460169_107460248
ENSMUSG00000079343.5_0	chr6	-	2220	10	FSM	ENSMUSG00000079343.5	ENST00000402681.7	2239	10	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2587	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTATCCGATCTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	124613117	124601890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124602922_124603716_124603792_124604449_124604579_124605249_124605329_124605712_124605829_124606957_124607112_124607976_124608177_124609020_124609147_124611973_124612152_124612985
ENSMUSG00000079350.3_0	chrX	-	1640	4	FSM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTCAAACTCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	153778846	153768776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_153770173_153771107_153771197_153777179_153777280_153778791
ENSMUSG00000079350.3_1	chrX	-	1583	3	ISM	ENSMUSG00000079350.3	ENSMUST00000070141.7	1646	4	1569	6	1569	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATCTCAAACTCTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	153777277	153768776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_153770173_153771107_153771197_153777179
ENSMUSG00000079357.10_1	chr14	-	3608	5	FSM	ENSMUSG00000079357.10	ENSMUST00000112652.9	3635	5	23	4	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGAAGGTAGTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	8551406	8518634	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_8521469_8521857_8521972_8526087_8526213_8547903_8548227_8551194
ENSMUSG00000079363.8_1	chr5	-	4509	11	FSM	ENSMUSG00000079363.8	ENSMUST00000100962.8	4538	11	21	8	21	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAATTCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105287431	105263640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_105266366_105267243_105267438_105267764_105267868_105268774_105268982_105269656_105269938_105270740_105270987_105273000_105273198_105273382_105273493_105282932_105283057_105284675_105284912_105287345
ENSMUSG00000079363.8_2	chr5	-	4425	10	ISM	ENSMUSG00000079363.8	ENSMUST00000100962.8	4538	11	2539	8	2539	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAATTCTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105284913	105263640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_105266366_105267243_105267438_105267764_105267868_105268774_105268982_105269656_105269938_105270740_105270987_105273000_105273198_105273382_105273493_105282932_105283057_105284675
ENSMUSG00000079387.11_0	chrX	+	2017	7	FSM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTATTTCTTTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	147665572	147707128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_147665664_147686432_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ENSMUSG00000079387.11_1	chrX	+	1925	6	ISM	ENSMUSG00000079387.11	ENSMUST00000163338.2	2025	7	20859	10	20859	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTTATTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	147686430	147707125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_147686559_147687278_147687359_147690981_147691941_147698819_147698902_147699707_147699758_147706499
ENSMUSG00000079414.4_0	chr17	-	1508	2	ISM	ENSMUSG00000079414.4	ENSMUST00000233454.2	1560	3	2456	9	2067	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATTAATTAATAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	57410466	57398378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_57399770_57410349
ENSMUSG00000079414.4_1	chr17	-	1547	3	FSM	ENSMUSG00000079414.4	ENSMUST00000233454.2	1560	3	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAATTAATTAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57412922	57398382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57399770_57410349_57410485_57412897
ENSMUSG00000079414.4_2	chr17	-	1007	4	NIC	ENSMUSG00000079414.4	novel	1013	5	NA	NA	0	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCTTTTGCTCCTAAG	NA	NA	NA	NA	NA	NA	NA	NA	57412942	57399041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_57399770_57409054_57409154_57410349_57410485_57412897
ENSMUSG00000079414.4_3	chr17	-	925	3	ISM	ENSMUSG00000079414.4	ENSMUST00000112915.3	1013	5	2496	6	2087	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCTTTTGCTCCTAAGT	NA	NA	NA	NA	NA	NA	NA	NA	57410446	57399040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_57399770_57409054_57409154_57410349
ENSMUSG00000079418.6_1	chrX	+	2191	13	FSM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	3	8	3	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGTCCAAGACGTTTCAG	NA	NA	NA	NA	NA	NA	NA	NA	139857658	139947258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139857721_139887027_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUSG00000079418.6_4	chrX	+	2085	12	FSM	ENSMUSG00000079418.6	ENSMUST00000239541.1	2091	12	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCCAAGACGTTTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	139857694	139947260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_139857721_139887027_139887139_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUSG00000079418.6_5	chrX	+	2121	12	ISM	ENSMUSG00000079418.6	ENSMUST00000112971.2	2202	13	29376	12	29337	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATACAAGTCCAAGACGTT	NA	NA	NA	NA	NA	NA	NA	NA	139887031	139947254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_139887139_139888914_139888987_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUSG00000079418.6_6	chrX	+	2053	11	ISM	ENSMUSG00000079418.6	ENSMUST00000239541.1	2091	12	29345	0	29345	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACGTTTCAGGACTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	139887039	139947266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_139887139_139890906_139891006_139893565_139893668_139893817_139893891_139895351_139895432_139896010_139896190_139896311_139896391_139941722_139941869_139943027_139943085_139945462_139945572_139946236
ENSMUSG00000079426.14_0	chr6	+	2255	6	FSM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	4583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGAGAGAGGAAGGGTGC	NA	NA	NA	NA	NA	NA	NA	NA	113355082	113367401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113355170_113357686_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUSG00000079426.14_4	chr6	+	1319	5	FSM	ENSMUSG00000079426.14	ENSMUST00000203578.3	1323	5	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTCTGTGCTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	113355108	113366610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_113355170_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUSG00000079426.14_7	chr6	+	2168	5	ISM	ENSMUSG00000079426.14	ENSMUST00000156898.5	2270	6	2610	9	2155	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAGAGAGGAAGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	113357685	113367400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_113357806_113358923_113359036_113361042_113361139_113362450_113362622_113365731
ENSMUSG00000079427.11_0	chr9	-	785	3	FSM	ENSMUSG00000079427.11	ENSMUST00000113110.5	801	3	12	4	12	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAATCAATAGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	88601854	88570658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88571039_88597540_88597803_88601711
ENSMUSG00000079428.9_0	chrX	+	956	3	FSM	ENSMUSG00000079428.9	ENSMUST00000113116.3	971	3	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAAATGTTTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	135124793	135126838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135124841_135125650_135125722_135126000
ENSMUSG00000079428.9_1	chrX	+	909	2	ISM	ENSMUSG00000079428.9	ENSMUST00000113116.3	971	3	861	11	861	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATAAAATGTTTAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	135125650	135126838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_135125722_135126000
ENSMUSG00000079429.10_4	chr1	+	4900	40	FSM	ENSMUSG00000079429.10	ENST00000389758.3	4915	40	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	3511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCCCTGATGCGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	88155977	88187746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_88156131_88158063_88158196_88158347_88158511_88159965_88160065_88161038_88161191_88161723_88161868_88162691_88162785_88162911_88162991_88163094_88163209_88164376_88164454_88165194_88165315_88165566_88165678_88166615_88166764_88167840_88167882_88168400_88168543_88168792_88168846_88169264_88169373_88170125_88170246_88170390_88170514_88171652_88171806_88172665_88172789_88173709_88173790_88174857_88174967_88175469_88175566_88176273_88176379_88177424_88177549_88177986_88178106_88178966_88179120_88180057_88180213_88182579_88182740_88182811_88183006_88183264_88183403_88183778_88183888_88184121_88184272_88184372_88184556_88185431_88185588_88186304_88186437_88186840_88186944_88187251_88187318_88187626
ENSMUSG00000079434.9_0	chr1	+	1546	3	FSM	ENSMUSG00000079434.9	ENSMUST00000070898.6	1570	3	18	6	18	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCATTTCTTCCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87522289	87525543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87522340_87522599_87522812_87524259
ENSMUSG00000079434.9_1	chr1	+	1498	2	FSM	ENSMUSG00000079434.9	ENSMUST00000165109.2	1824	2	326	0	326	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCATTTCTTCCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	87522597	87525543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87522812_87524259
ENSMUSG00000079435.10_0	chrX	+	473	5	FSM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	7066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTACCTGAAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133486404	133488797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_133486469_133486826_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUSG00000079435.10_8	chrX	+	403	4	ISM	ENSMUSG00000079435.10	ENSMUST00000113211.8	483	5	430	8	430	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATTACCTGAAGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	133486832	133488797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_133486933_133487259_133487328_133488199_133488323_133488685
ENSMUSG00000079442.13_0	chr2	+	3609	6	FSM	ENSMUSG00000079442.13	ENSMUST00000102818.11	3626	6	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1714	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAGCTGTCAACCACTT	NA	NA	NA	NA	NA	NA	NA	NA	32477117	32489704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32477240_32477592_32477694_32479456_32479643_32484001_32484415_32485705_32485814_32487025
ENSMUSG00000079444.10_0	chr17	-	2704	9	FSM	ENSMUSG00000079444.10	ENSMUST00000143789.5	2721	9	8	9	8	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAAAGACAGGTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	48005372	47997672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_47997934_47998112_47998214_47998823_47999765_48000206_48000412_48000982_48001187_48001498_48001637_48002281_48002390_48003259_48003405_48004771
ENSMUSG00000079444.10_5	chr17	-	758	4	FSM	ENSMUSG00000096549.10	ENST00000394259.5	778	4	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGCACGCAACCCTGGC	NA	NA	NA	NA	NA	NA	NA	NA	48001619	47999845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_48000074_48000206_48000412_48000982_48001187_48001498
ENSMUSG00000079444.10_8	chr17	-	1151	6	ISM	ENSMUSG00000079444.10	ENST00000335515.10	1177	7	12	2127	12	-2127	5prime_fragment	TRUE	canonical	NA	NA	NA	NA	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAGTAGCGGAAGGACAA	NA	NA	NA	NA	NA	NA	NA	NA	48005149	48000236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_48000412_48000982_48001187_48001498_48001637_48002281_48002390_48003256_48003405_48004771
ENSMUSG00000079450.12_0	chrX	+	3274	3	FSM	ENSMUSG00000079450.12	ENSMUST00000113343.8	3301	3	14	13	14	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAACAAATGCTAAGGTG	NA	NA	NA	NA	NA	NA	NA	NA	122013205	122055335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_122013335_122027150_122027267_122052306
ENSMUSG00000079457.12_0	chr1	+	1485	3	ISM	ENSMUSG00000079457.12	ENSMUST00000113402.4	1538	4	2432	38	2432	-38	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	85179860	85191469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_85180030_85185724_85185919_85190347
ENSMUSG00000079465.9_0	chr1	+	8546	52	FSM	ENSMUSG00000079465.9	ENSMUST00000113457.9	8554	52	5	3	5	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATATTTTGGGTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	82564701	82699777	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_82565153_82619159_82619217_82620929_82621020_82626298_82626344_82627476_82627522_82628281_82628345_82628974_82629029_82629881_82629909_82631021_82631100_82632674_82632738_82632846_82632883_82634571_82634614_82634866_82634945_82637944_82638008_82638546_82638607_82639922_82639968_82640616_82640671_82642297_82642340_82644241_82644327_82644615_82644652_82646640_82646806_82647392_82647483_82647895_82647992_82649027_82649099_82650317_82650501_82651699_82651869_82653629_82653723_82654386_82654489_82656287_82656386_82656799_82656951_82657269_82657384_82658400_82658569_82660006_82660097_82660423_82660559_82666827_82666927_82667706_82667797_82668241_82668382_82671139_82671267_82673976_82674058_82674400_82674500_82675460_82675509_82677958_82678145_82678477_82678609_82686310_82686384_82688520_82688593_82688679_82688806_82689560_82689660_82692962_82693176_82693732_82693911_82694018_82694134_82695553_82695727_82696520
ENSMUSG00000079469.11_0	chr9	-	2168	12	FSM	ENSMUSG00000079469.11	ENSMUST00000098566.5	2193	12	25	0	-23	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCCCCCCAGCAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72946956	72922977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_72923578_72924672_72924854_72925151_72925366_72928567_72928633_72929556_72929769_72930510_72930563_72936847_72936989_72939334_72939466_72941768_72941874_72943985_72944104_72945904_72946041_72946743
ENSMUSG00000079470.9_0	chr1	+	7391	3	FSM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGCTTCATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78635754	78649227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_78635821_78640857_78640998_78642042
ENSMUSG00000079470.9_1	chr1	+	3661	4	FSM	ENSMUSG00000079470.9	ENSMUST00000151622.2	3685	4	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTGCACAAGCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	78636172	78645293	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_78636378_78638042_78638108_78640857_78640998_78642042
ENSMUSG00000079470.9_2	chr1	+	7320	2	ISM	ENSMUSG00000079470.9	ENSMUST00000053760.12	7393	3	5108	2	4706	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGGTGCTTCATTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	78640862	78649227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_78640998_78642042
ENSMUSG00000079471.5_0	chr17	-	791	2	FSM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45912981	45911897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_45912612_45912904
ENSMUSG00000079471.5_1	chr17	-	713	1	ISM	ENSMUSG00000079471.5	ENSMUST00000178858.3	804	2	383	1	282	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGGTGGTGGCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	45912610	45911897	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_45911900_45912600
ENSMUSG00000079477.10_0	chr6	-	2133	6	FSM	ENSMUSG00000079477.10	ENSMUST00000113600.10	2159	6	9	17	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5973	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAGAACAAAGAACAGCT	NA	NA	NA	NA	NA	NA	NA	NA	88022243	87976104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87977513_87981152_87981282_87981974_87982194_87989288_87989416_87990619_87990681_88022054
ENSMUSG00000079478.10_0	chr19	-	677	3	FSM	ENSMUSG00000118125.2	ENST00000527920.5	688	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATCTGCTAACTCAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	5781632	5779349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5779767_5781254_5781354_5781471
ENSMUSG00000079478.10_3	chr19	-	693	3	FSM	ENSMUSG00000079478.10	ENST00000526877.1	704	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCACCTTTCCATGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	5781614	5780259	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5780741_5781268_5781354_5781487
ENSMUSG00000079478.10_5	chr19	-	642	3	ISM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	137	0	3	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTTTCTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5781618	5780330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5780741_5781268_5781354_5781471
ENSMUSG00000079478.10_6	chr19	-	697	4	FSM	ENSMUSG00000079478.10	ENSMUST00000025885.6	699	4	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTTTCTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	5781753	5780330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUSG00000079480.4_0	chrX	+	466	4	FSM	ENSMUSG00000079480.4	ENSMUST00000113627.4	489	4	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTGACTAAGTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	101163066	101171266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_101163171_101165273_101165348_101170622_101170743_101171098
ENSMUSG00000079484.13_0	chr2	+	1340	12	FSM	ENSMUSG00000079484.13	ENSMUST00000091132.13	1353	12	0	13	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTAAAATATATTTTATAT	NA	NA	NA	NA	NA	NA	NA	NA	30156540	30172148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30156638_30156874_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079484.13_1	chr2	+	1348	12	NIC	ENSMUSG00000079484.13	novel	1353	12	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATATTTTATATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	30156540	30172152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_30156638_30156874_30156954_30159700_30159864_30164481_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079484.13_5	chr2	+	1169	10	FSM	ENSMUSG00000079484.13	ENSMUST00000113643.8	1195	10	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACGACTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	30156875	30172138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30156954_30159700_30159860_30164481_30164558_30164687_30164736_30167014_30167071_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079484.13_6	chr2	+	1188	10	NIC	ENSMUSG00000079484.13	novel	1195	10	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAACGACTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	30156860	30172138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_30156954_30159700_30159864_30164481_30164558_30164687_30164736_30167014_30167071_30167634_30167657_30169966_30170096_30170182_30170300_30171021_30171149_30171781
ENSMUSG00000079487.12_0	chrX	+	6802	45	FSM	ENSMUSG00000079487.12	ENSMUST00000087948.11	6809	45	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAAGTGTGTGAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	100317865	100341064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_100317966_100318501_100318607_100318777_100318970_100319097_100319258_100319705_100319888_100320047_100320159_100320270_100320526_100321039_100321187_100321458_100321559_100321669_100321807_100322033_100322166_100322950_100323078_100324161_100324392_100324773_100324855_100324968_100325140_100325343_100325489_100325655_100325707_100326006_100326126_100326305_100326450_100326887_100327052_100327273_100327406_100327751_100327980_100328149_100328295_100328467_100328589_100329066_100329169_100329264_100329379_100329630_100329807_100329973_100330154_100331166_100331239_100331654_100331789_100331955_100332118_100332736_100332849_100333011_100333102_100333623_100333734_100333930_100334067_100334800_100334963_100336149_100336528_100336741_100336893_100337030_100337237_100337398_100337477_100337563_100337782_100339447_100339695_100340198_100340340_100340524_100340607_100340792
ENSMUSG00000079499.10_0	chr2	-	4291	2	FSM	ENSMUSG00000079499.10	ENSMUST00000155949.2	4301	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGGAAAATGAATAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	29143005	29135128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_29138891_29142476
ENSMUSG00000079508.9_0	chrX	+	1207	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113897.9	1218	9	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAACAAAGCTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93410759	93460688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_93411108_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUSG00000079508.9_1	chrX	+	1011	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113896.8	1032	9	10	11	-8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAACAAAGCTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93410780	93460688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_93410933_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUSG00000079508.9_3	chrX	+	1151	9	FSM	ENSMUSG00000079508.9	ENSMUST00000113895.2	1173	9	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAACAAAGCTGGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	93410799	93460688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_93411092_93423531_93423640_93425716_93425837_93431270_93431326_93434350_93434447_93437794_93437887_93441727_93441809_93456065_93456132_93460447
ENSMUSG00000079509.11_0	chrX	-	6971	9	FSM	ENSMUSG00000079509.11	ENSMUST00000088102.12	7002	9	25	6	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACCCTAGTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93166988	93118242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93157801_93157870_93166673
ENSMUSG00000079509.11_1	chrX	-	6750	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113926.8	6762	8	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACCCTAGTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93166499	93118242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166337
ENSMUSG00000079509.11_2	chrX	-	6900	8	FSM	ENSMUSG00000079509.11	ENSMUST00000113927.8	6933	8	28	5	28	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTACCCTAGTGGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	93166985	93118242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_93123586_93124325_93124467_93124942_93125093_93125430_93125575_93125755_93125906_93141888_93142459_93145896_93145987_93166673
ENSMUSG00000079511.9_0	chr6	+	3625	11	NIC	ENSMUSG00000079511.9	novel	3628	12	NA	NA	9	-7	intron_retention	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGCTATTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	83078606	83086913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_83079620_83079938_83080026_83080100_83080251_83080382_83080514_83080592_83080707_83084033_83084149_83084435_83084614_83084735_83084936_83085071_83086185_83086294_83086408_83086502
ENSMUSG00000079511.9_1	chr6	+	678	3	FSM	ENSMUSG00000030037.10	ENSMUST00000113938.5	695	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	466	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGAATGCTATTTTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	83086030	83086913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_83086185_83086294_83086408_83086502
ENSMUSG00000079523.9_0	chr6	-	554	3	FSM	ENSMUSG00000079523.9	ENSMUST00000114050.8	570	3	10	6	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTTGGCGTGGTCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	72935461	72934335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72934636_72934895_72935008_72935319
ENSMUSG00000079532.2_0	chrX	+	750	3	FSM	ENSMUSG00000079532.2	ENSMUST00000114117.2	776	3	13	13	13	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTACTGAACAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	73784545	73785781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_73784886_73785195_73785325_73785500
ENSMUSG00000079547.5_0	chr17	+	1395	6	FSM	ENSMUSG00000079547.5	ENSMUST00000114232.4	1404	6	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTCCCAAGTTTGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	34372048	34379198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_34372428_34374406_34374689_34376219_34376505_34378317_34378435_34378602_34378639_34378902
ENSMUSG00000079550.10_0	chr1	-	1532	13	FSM	ENSMUSG00000079550.10	ENST00000409474.8	1549	13	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTAATCTAGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	59188805	59160419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59160604_59162601_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083_59169255_59178849_59178960_59182894_59182980_59183812_59184010_59185500_59185573_59185905_59185992_59188172_59188255_59188679
ENSMUSG00000079550.10_1	chr1	-	1466	13	FSM	ENSMUSG00000079550.10	ENST00000428900.6	1481	13	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTAATCTAGTGTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	59188807	59160419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_59160604_59162601_59162737_59163789_59163899_59164681_59164776_59168090_59168172_59169083_59169255_59171080_59171123_59182894_59182980_59183812_59184010_59185500_59185573_59185905_59185992_59188172_59188255_59188679
ENSMUSG00000079553.12_0	chr17	-	2350	11	FSM	ENSMUSG00000079553.12	ENSMUST00000173492.9	2357	11	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTGTTTTGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34109628	34094632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102072_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079553.12_1	chr17	-	2164	11	FSM	ENSMUSG00000079553.12	ENST00000428849.7	2181	11	10	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAGAGCCTGATTCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	34109598	34094792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34094844_34100402_34100479_34100961_34101036_34101130_34101422_34102068_34102853_34103562_34103961_34104141_34104193_34104822_34104877_34105549_34105650_34105737_34105876_34109451
ENSMUSG00000079555.3_0	chr5	-	2055	5	FSM	ENSMUSG00000079555.3	ENSMUST00000060049.8	2073	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	480	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTATGCCTGCTGTGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	34326859	34311229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34311451_34320866_34321096_34323259_34323700_34324748_34325788_34326733
ENSMUSG00000079557.12_0	chr17	-	1381	5	FSM	ENSMUSG00000079557.12	ENSMUST00000172767.9	1398	5	9	8	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCAGTTATGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	33937635	33910496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33911128_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079557.12_1	chr17	-	1397	5	FSM	ENSMUSG00000079557.12	ENSMUST00000173015.8	1418	5	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCATCAGTTATGTTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	33937601	33910496	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33911178_33915010_33915221_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079557.12_5	chr17	-	1167	4	FSM	ENSMUSG00000079557.12	ENST00000381035.8	1192	4	14	11	14	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGAGCCCTTGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	33937658	33910523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33911128_33921986_33922183_33928718_33928947_33937519
ENSMUSG00000079560.14_0	chr6	-	2739	5	FSM	ENSMUSG00000079560.14	ENST00000317201.7	2759	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATTACGATCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52177940	52146051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52147723_52149100_52149750_52160687_52160771_52165003_52165216_52177816
ENSMUSG00000079560.14_1	chr6	-	3007	6	FSM	ENSMUSG00000079560.14	ENST00000612286.5	3021	6	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGATTACGATCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52190309	52146051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52147723_52149100_52149750_52160687_52160771_52165003_52165216_52177816_52177919_52190019
ENSMUSG00000079562.8_0	chr5	+	2179	9	FSM	ENSMUSG00000079562.8	ENSMUST00000114449.7	2193	9	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	2544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTGTGTGAGGTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	33492863	33530637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33520038_33520162_33523065_33523143_33525981_33526091_33527774_33527909_33528957_33529154_33529610
ENSMUSG00000079562.8_13	chr5	+	1879	7	FSM	ENSMUSG00000079562.8	ENST00000514708.5	1892	7	4	9	4	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAAAGTGTGTTAATA	NA	NA	NA	NA	NA	NA	NA	NA	33492920	33530598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33492990_33515783_33515967_33517695_33517900_33525981_33526091_33527774_33527909_33528961_33529154_33529610
ENSMUSG00000079580.10_1	chr17	-	789	2	FSM	ENSMUSG00000079580.10	ENST00000652639.1	797	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATACGAGGGCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	29769069	29745469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29745731_29768541
ENSMUSG00000079588.4_1	chr1	+	435	3	FSM	ENSMUSG00000079588.4	ENST00000488134.5	452	3	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATTTCGAAGCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	40845266	40894199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40845359_40846781_40846881_40893955
ENSMUSG00000079588.4_3	chr1	+	343	2	ISM	ENSMUSG00000079588.4	ENST00000488134.5	452	3	1524	8	1524	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGATTTCGAAGCACCACA	NA	NA	NA	NA	NA	NA	NA	NA	40846781	40894199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_40846881_40893955
ENSMUSG00000079592.10_0	chr9	+	1231	3	FSM	ENSMUSG00000079592.10	ENSMUST00000114816.8	1259	3	27	1	-2	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGTCTCTCCCTTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	44018568	44020483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44018642_44019002_44019269_44019591
ENSMUSG00000079592.10_1	chr9	+	1346	3	FSM	ENSMUSG00000079592.10	ENSMUST00000114821.9	1365	3	12	7	-8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTCCCACTGGTCTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	44018562	44020475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44018759_44019002_44019269_44019591
ENSMUSG00000079592.10_2	chr9	+	1206	3	FSM	ENSMUSG00000079592.10	ENSMUST00000114815.3	1215	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTCCCACTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44018610	44020472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44018670_44019002_44019269_44019591
ENSMUSG00000079592.10_3	chr9	+	1147	2	ISM	ENSMUSG00000079592.10	ENSMUST00000114815.3	1215	3	392	9	392	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTCCCACTGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44019002	44020472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_44019269_44019591
ENSMUSG00000079610.10_0	chr1	-	2089	4	FSM	ENSMUSG00000079610.10	ENSMUST00000001172.12	2109	4	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACCTATTTAAATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36586514	36577182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36578616_36580939_36581144_36581842_36581947_36586166
ENSMUSG00000079614.5_0	chr18	+	3519	9	FSM	ENSMUSG00000079614.5	ENSMUST00000025421.9	3542	9	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGAATCTGTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	67907957	67928546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933_67925085_67926219
ENSMUSG00000079614.5_12	chr18	+	1659	8	FSM	ENSMUSG00000079614.5	ENSMUST00000237700.2	1684	8	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTACAGCTTTGTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	67908063	67925657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67908191_67912274_67912326_67916984_67917132_67917956_67918169_67920225_67920325_67921761_67921903_67922409_67922568_67924933
ENSMUSG00000079625.3_0	chr16	+	505	3	FSM	ENSMUSG00000079625.3	ENST00000454715.5	521	3	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1622	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCACTAGGTAACGGAT	NA	NA	NA	NA	NA	NA	NA	NA	32224692	32226822	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32224855_32226354_32226525_32226649
ENSMUSG00000079641.4_0	chrX	-	603	3	FSM	ENSMUSG00000079641.4	ENSMUST00000115231.4	612	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	9533	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGACCCGATAAGGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	36349046	36346172	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_36346403_36347637_36347742_36348777
ENSMUSG00000079654.4_0	chr6	-	2207	5	FSM	ENSMUSG00000079654.4	ENST00000489835.6	2233	5	20	6	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGAATGTTCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	29177802	29169234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29170307_29171340_29171568_29176450_29176567_29176901_29177007_29177115
ENSMUSG00000079654.4_1	chr6	-	3375	5	FSM	ENSMUSG00000079654.4	ENSMUST00000159200.2	3411	5	32	4	32	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAGAATGTTCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	29179551	29169234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_29171568_29176440_29176567_29176901_29177007_29177115_29177831_29179455
ENSMUSG00000079658.10_0	chr1	-	2004	4	FSM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGTACGATCAGCACTT	NA	NA	NA	NA	NA	NA	NA	NA	16727106	16711956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727045
ENSMUSG00000079658.10_1	chr1	-	1935	3	ISM	ENSMUSG00000079658.10	ENSMUST00000188641.7	2014	4	8881	12	8881	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAAAGGTACGATCAGC	NA	NA	NA	NA	NA	NA	NA	NA	16718227	16711960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_16713703_16715909_16716054_16718178
ENSMUSG00000079658.10_8	chr1	-	955	4	FSM	ENSMUSG00000079658.10	ENSMUST00000115352.10	960	4	0	5	0	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCATCTTGTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	16727266	16712995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_16713703_16715909_16716054_16718178_16718232_16727215
ENSMUSG00000079677.3_0	chr9	-	789	5	FSM	ENSMUSG00000079677.3	ENSMUST00000010348.7	812	5	13	10	-10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACACATCTCCGACA	NA	NA	NA	NA	NA	NA	NA	NA	20984827	20978825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984684
ENSMUSG00000079677.3_1	chr9	-	445	5	FSM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAGGCCACTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	20984817	20979065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20984778
ENSMUSG00000079677.3_2	chr9	-	347	3	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	340	10	340	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACATGAGGCCACTGGA	NA	NA	NA	NA	NA	NA	NA	NA	20984477	20979069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20979222_20979325_20979414_20984370
ENSMUSG00000079677.3_3	chr9	-	401	4	ISM	ENSMUSG00000079677.3	ENST00000494368.5	451	5	208	6	208	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGAGGCCACTGGACAGA	NA	NA	NA	NA	NA	NA	NA	NA	20984609	20979065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559
ENSMUSG00000079685.11_0	chr10	-	5945	5	FSM	ENSMUSG00000079685.11	ENSMUST00000218087.2	5959	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAACTTTGTCTGTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	7423352	7390366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_7395698_7396417_7396553_7397380_7397485_7406339_7406616_7423253
ENSMUSG00000079707.11_0	chr17	-	726	4	FSM	ENSMUSG00000079707.11	ENSMUST00000040746.8	720	4	-17	11	-17	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATACAGATCTGTGAGC	NA	NA	NA	NA	NA	NA	NA	NA	15261767	15247426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15247580_15250770_15250927_15253608_15253816_15261557
ENSMUSG00000079710.11_0	chr17	-	743	4	FSM	ENSMUSG00000079710.11	ENSMUST00000179539.9	752	4	9	0	-4	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATCCTTCAAAATAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	15230435	15216077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_15216212_15219403_15219560_15222241_15222449_15230189
ENSMUSG00000079737.5_0	chr16	+	1608	2	FSM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGGTACTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13489883	13496246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13489943_13494697
ENSMUSG00000079737.5_1	chr16	+	1545	1	ISM	ENSMUSG00000079737.5	ENSMUST00000035426.7	1611	2	4818	3	4818	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAACTGGTACTTTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	13494701	13496246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_13494700_13496200
ENSMUSG00000079965.3_0	chrX	-	534	1	FSM	ENSMUSG00000079965.3	ENSMUST00000116081.3	549	1	6	9	6	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGTTAAATGTACACTAA	NA	NA	NA	NA	NA	NA	NA	NA	104888613	104888079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104888100_104888600
ENSMUSG00000080115.4_0	chr10	-	393	2	FSM	ENSMUSG00000080115.4	ENST00000548256.5	410	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	412	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGAACCTACCTTCCCG	NA	NA	NA	NA	NA	NA	NA	NA	126876958	126869012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_126869300_126876852
ENSMUSG00000080573.3_0	chr11	-	115	1	FSM	ENSMUSG00000080573.3	ENSMUST00000116923.3	120	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTAACATTTTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	69526345	69526230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69526200_69526300
ENSMUSG00000080717.11_0	chr16	+	668	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231936.2	672	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGCATGAGAAAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	97798514	97832997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97832693
ENSMUSG00000080717.11_1	chr16	+	1263	3	FSM	ENSMUSG00000080717.11	ENSMUST00000122450.8	1298	3	25	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAAATCTTAATACTTGA	NA	NA	NA	NA	NA	NA	NA	NA	97798547	97811190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97798637_97809828_97809956_97810143
ENSMUSG00000080717.11_2	chr16	+	1222	5	FSM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	97798565	97817950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_97798637_97809828_97809956_97810143_97810205_97816865_97816920_97817041
ENSMUSG00000080717.11_3	chr16	+	1140	4	ISM	ENSMUSG00000080717.11	ENSMUST00000231913.2	1230	5	11276	6	11	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	97809839	97817950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_97809956_97810143_97810205_97816865_97816920_97817041
ENSMUSG00000080727.3_0	chr3	+	1316	2	FSM	ENSMUSG00000080727.3	ENSMUST00000142433.2	1330	2	14	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTGTCAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	95778847	95795268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_95778998_95794102
ENSMUSG00000080797.3_0	chr16	-	3211	1	FSM	ENSMUSG00000080797.3	ENSMUST00000231978.2	3245	1	21	13	21	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACACCAAACCAAGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	20367185	20363974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_20364000_20367200
ENSMUSG00000080848.4_0	chr9	-	577	1	FSM	ENSMUSG00000080848.4	ENSMUST00000117563.2	472	1	-65	-40	-65	40	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTCTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	115870197	115869620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_115869600_115870200
ENSMUSG00000080859.2_0	chr2	-	725	1	FSM	ENSMUSG00000080859.2	ENSMUST00000119438.2	645	1	-33	-47	-33	47	mono-exon	FALSE	NA	NA	NA	NA	NA	164	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGCATCAAGTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	105385223	105384498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105384500_105385200
ENSMUSG00000080885.2_0	chr19	-	727	1	FSM	ENSMUSG00000080885.2	ENSMUST00000121321.2	642	1	-32	-53	-32	53	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCGCATCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37273227	37272500	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_37272500_37273200
ENSMUSG00000080921.5_0	chr6	-	287	1	FSM	ENSMUSG00000080921.5	ENSMUST00000117356.2	213	1	-40	-34	-40	34	mono-exon	FALSE	NA	NA	NA	NA	NA	185	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGTGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	140692938	140692651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_140692700_140692900
ENSMUSG00000080950.2_0	chr1	-	1397	1	FSM	ENSMUSG00000080950.2	ENSMUST00000119836.2	1401	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATGCCATTTTTGTAGC	NA	NA	NA	NA	NA	NA	NA	NA	152606310	152604913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152604900_152606300
ENSMUSG00000081051.5_0	chr1	+	522	1	FSM	ENSMUSG00000081051.5	ENSMUST00000117288.2	531	1	7	2	7	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACACAGAGACCCACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	95426352	95426874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_95426400_95426900
ENSMUSG00000081058.6_0	chr3	-	980	1	FSM	ENSMUSG00000081058.6	ENSMUST00000167403.4	1020	1	31	9	31	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTGAAGATTATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	96146412	96145432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96145400_96146400
ENSMUSG00000081094.5_0	chr8	+	696	1	FSM	ENSMUSG00000081094.5	ENSMUST00000122422.3	591	1	-23	-82	-23	82	mono-exon	FALSE	NA	NA	NA	NA	NA	590	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAAAAAAAAAAATGGGA	NA	NA	NA	NA	NA	NA	NA	NA	19542928	19543624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_19542900_19543600
ENSMUSG00000081126.2_0	chr6	+	1433	1	FSM	ENSMUSG00000081126.2	ENSMUST00000120260.2	1462	1	24	5	24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAACATACATGTGATACC	NA	NA	NA	NA	NA	NA	NA	NA	149263207	149264640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_149263200_149264600
ENSMUSG00000081205.5_0	chrX	+	1759	1	FSM	ENSMUSG00000081205.5	ENSMUST00000117582.2	1068	1	2	-693	2	693	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATAGCATTAAGATT	NA	NA	NA	NA	NA	NA	NA	NA	79500349	79502108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_79500300_79502100
ENSMUSG00000081214.4_0	chr1	-	408	1	FSM	ENSMUSG00000081214.4	ENSMUST00000117444.2	333	1	-31	-44	-31	44	mono-exon	FALSE	NA	NA	NA	NA	NA	525	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	181069916	181069508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181069500_181069900
ENSMUSG00000081221.5_0	chrX	-	1220	1	FSM	ENSMUSG00000081221.5	ENSMUST00000121831.2	999	1	-42	-179	-42	179	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACCCACAAAACAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79238500	79237280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_79237300_79238500
ENSMUSG00000081234.4_0	chr2	+	4392	2	FSM	ENSMUSG00000081234.4	ENSMUST00000215163.3	4404	2	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGAAATATTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	87185158	87192118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_87185222_87187789
ENSMUSG00000081255.2_0	chrX	+	2110	1	FSM	ENSMUSG00000081255.2	ENSMUST00000119296.2	2136	1	21	5	21	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGAGGTGGTTTACACA	NA	NA	NA	NA	NA	NA	NA	NA	13168544	13170654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13168500_13170700
ENSMUSG00000081344.6_0	chr2	-	290	1	FSM	ENSMUSG00000081344.6	ENSMUST00000121320.2	171	1	-39	-80	-39	80	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAACTTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	172351650	172351360	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_172351400_172351600
ENSMUSG00000081406.5_0	chr2	-	810	1	FSM	ENSMUSG00000081406.5	ENSMUST00000118499.2	750	1	-27	-33	-27	33	mono-exon	FALSE	NA	NA	NA	NA	NA	4332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCTTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75022193	75021383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_75021400_75022200
ENSMUSG00000081534.4_0	chr15	+	2521	3	FSM	ENSMUSG00000081534.4	ENSMUST00000117892.2	2536	3	11	4	11	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	5876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAAGTTTGTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	97682246	97690569	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97682498_97687783_97687952_97688467
ENSMUSG00000081541.2_0	chr2	-	297	1	FSM	ENSMUSG00000081541.2	ENSMUST00000121023.2	301	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCTCAACTAATGAAAGT	NA	NA	NA	NA	NA	NA	NA	NA	112219841	112219544	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_112219500_112219800
ENSMUSG00000081557.3_0	chr1	-	2462	1	FSM	ENSMUSG00000081557.3	ENSMUST00000122295.3	2482	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTCCATGATTGGACATT	NA	NA	NA	NA	NA	NA	NA	NA	28841782	28839320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_28839300_28841800
ENSMUSG00000081604.6_0	chr11	-	480	1	FSM	ENSMUSG00000081604.6	ENSMUST00000118048.2	411	1	-50	-19	-50	19	mono-exon	FALSE	NA	NA	NA	NA	NA	249	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAATTAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	93928504	93928024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93928000_93928500
ENSMUSG00000081620.2_0	chrX	-	462	1	FSM	ENSMUSG00000081620.2	ENSMUST00000121152.2	470	1	8	0	8	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAGAAATGATCA	NA	NA	NA	NA	NA	NA	NA	NA	55493709	55493247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_55493200_55493700
ENSMUSG00000081631.2_0	chr11	+	364	1	FSM	ENSMUSG00000081631.2	ENSMUST00000121451.2	379	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTAGGACACATTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	14112085	14112449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_14112100_14112400
ENSMUSG00000081684.5_0	chrX	+	911	1	FSM	ENSMUSG00000081684.5	ENSMUST00000117295.2	882	1	11	-40	11	40	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51987475	51988386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_51987500_51988400
ENSMUSG00000081738.2_0	chrX	+	625	1	FSM	ENSMUSG00000081738.2	ENSMUST00000117548.2	636	1	0	11	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGATTAAGTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	144958937	144959562	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_144958900_144959600
ENSMUSG00000081824.6_0	chr16	+	444	1	FSM	ENSMUSG00000081824.6	ENSMUST00000121906.2	319	1	-18	-107	-18	107	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTCTTAAAAAAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	42775975	42776419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_42776000_42776400
ENSMUSG00000081855.5_0	chr5	-	659	1	FSM	ENSMUSG00000081855.5	ENSMUST00000121001.2	555	1	-67	-37	-67	37	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	22818247	22817588	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_22817600_22818200
ENSMUSG00000081859.4_0	chr7	+	2294	2	FSM	ENSMUSG00000081859.4	ENSMUST00000121432.4	2321	2	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAGTCCATACACATGAAA	NA	NA	NA	NA	NA	NA	NA	NA	103852660	103857062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_103853113_103855220
ENSMUSG00000081929.2_0	chr11	+	441	1	FSM	ENSMUSG00000081929.2	ENSMUST00000121547.2	456	1	4	11	4	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTCTAAGGAGACTCT	NA	NA	NA	NA	NA	NA	NA	NA	116273579	116274020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116273600_116274000
ENSMUSG00000081945.5_0	chr7	-	5652	1	FSM	ENSMUSG00000081945.5	ENSMUST00000119283.4	915	1	8	-4745	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCTAATAAACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	103110390	103104738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103104700_103110400
ENSMUSG00000081945.5_1	chr7	-	5699	2	FSM	ENSMUSG00000081945.5	ENSMUST00000214347.2	5706	2	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGCTAATAAACTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	103113357	103104738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_103110395_103113314
ENSMUSG00000082035.2_0	chrX	+	594	1	FSM	ENSMUSG00000082035.2	ENSMUST00000118924.2	621	1	17	10	17	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGATAAAGTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95528481	95529075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_95528500_95529100
ENSMUSG00000082044.2_0	chr2	-	395	1	FSM	ENSMUSG00000082044.2	ENSMUST00000121967.2	279	1	27	-143	27	143	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAATAAATAAACATA	NA	NA	NA	NA	NA	NA	NA	NA	131164259	131163864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_131163900_131164300
ENSMUSG00000082082.2_0	chr4	+	1559	3	FSM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	0	16	0	-16	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGTGAAAGAAGAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	145173309	145177442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_145173342_145174456_145174578_145176036
ENSMUSG00000082082.2_2	chr4	+	1497	2	ISM	ENSMUSG00000082082.2	ENSMUST00000120870.2	1575	3	1175	18	1175	-18	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTGAAAGAAGAAACT	NA	NA	NA	NA	NA	NA	NA	NA	145174484	145177440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_145174578_145176036
ENSMUSG00000082286.12_0	chr11	+	767	3	FSM	ENSMUSG00000082286.12	ENSMUST00000145164.8	789	3	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGATGGCAAGATCCTCA	NA	NA	NA	NA	NA	NA	NA	NA	3075918	3079389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3076059_3077478_3077645_3078928
ENSMUSG00000082286.12_1	chr11	+	1219	7	FSM	ENSMUSG00000082286.12	ENSMUST00000119128.9	1235	7	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCCTCTCGGTTGTGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	3076019	3081002	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_3076179_3077478_3077645_3078928_3079166_3079381_3079521_3079764_3079912_3080152_3080314_3080792
ENSMUSG00000082292.4_0	chr11	+	1263	1	FSM	ENSMUSG00000082292.4	ENSMUST00000119467.2	1274	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAAGGTTCTAAAGATGG	NA	NA	NA	NA	NA	NA	NA	NA	58078569	58079832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58078600_58079800
ENSMUSG00000082345.2_0	chr2	-	401	1	FSM	ENSMUSG00000082345.2	ENSMUST00000120658.2	433	1	20	12	20	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACAAGTAGTTGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	69568113	69567712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_69567700_69568100
ENSMUSG00000082361.7_0	chr5	-	2876	6	FSM	ENSMUSG00000082361.7	ENSMUST00000121044.6	2876	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTTTTCTTTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	91550853	91505119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_91507187_91508604_91508713_91510163_91510311_91513979_91514098_91524772_91524872_91550516
ENSMUSG00000082399.2_0	chr2	+	470	1	FSM	ENSMUSG00000082399.2	ENSMUST00000118248.2	480	1	6	4	6	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAATGACTCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	134645874	134646344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_134645900_134646300
ENSMUSG00000082480.2_0	chr2	-	873	1	FSM	ENSMUSG00000082480.2	ENSMUST00000118911.2	886	1	4	9	4	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	143985289	143984416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_143984400_143985300
ENSMUSG00000082519.2_0	chr2	-	634	1	FSM	ENSMUSG00000082519.2	ENSMUST00000120334.2	655	1	12	9	12	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAATAAGGAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	173889054	173888420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_173888400_173889100
ENSMUSG00000082691.7_0	chr6	-	683	1	FSM	ENSMUSG00000082691.7	ENSMUST00000117045.2	342	1	-25	-316	-25	316	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTCAAAATTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	135326772	135326089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_135326100_135326800
ENSMUSG00000082724.4_0	chr2	+	2300	3	FSM	ENSMUSG00000082724.4	ENSMUST00000118630.2	2308	3	2	6	2	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCCTTTAAACATTTCTA	NA	NA	NA	NA	NA	NA	NA	NA	176830454	176834118	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176830574_176830784_176830852_176832004
ENSMUSG00000082740.2_0	chr2	-	532	2	FSM	ENSMUSG00000082740.2	ENSMUST00000117906.2	678	2	199	-53	9	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTGAATTATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	150311886	150311277	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_150311583_150311659
ENSMUSG00000082762.2_0	chr4	-	829	1	FSM	ENSMUSG00000082762.2	ENSMUST00000121722.2	873	1	85	-41	85	41	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	35202890	35202061	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_35202100_35202900
ENSMUSG00000082894.2_0	chrX	+	1869	1	FSM	ENSMUSG00000082894.2	ENSMUST00000121552.2	1886	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGTGGTAAAATCAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	46813414	46815283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_46813400_46815300
ENSMUSG00000082926.4_0	chrX	-	728	1	FSM	ENSMUSG00000082926.4	ENSMUST00000120762.2	750	1	14	8	14	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGTCTTTAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	68649837	68649109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_68649100_68649800
ENSMUSG00000083012.10_0	chr5	+	2190	2	FSM	ENSMUSG00000118332.2	ENSMUST00000119488.2	2202	2	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATGTTCTCCTTATCTTT	NA	NA	NA	NA	NA	NA	NA	NA	143534474	143550286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143534890_143548511
ENSMUSG00000083012.10_1	chr5	+	894	2	FSM	ENSMUSG00000118332.2	ENSMUST00000118121.2	919	2	17	8	17	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCATTCCCGGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	143534517	143537685	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143534890_143537163
ENSMUSG00000083012.10_2	chr5	+	2273	3	FSM	ENSMUSG00000083012.10	ENSMUST00000196487.2	2278	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGTATGTTCTCCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	143534520	143550282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143534890_143537163_143537297_143548511
ENSMUSG00000083282.4_1	chr19	+	1963	14	FSM	ENSMUSG00000083282.4	ENSMUST00000119694.3	1980	14	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGTAAGTGCTTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	4905174	4910946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4905515_4905725_4905825_4906097_4906183_4906274_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_10	chr19	+	1786	13	FSM	ENSMUSG00000083282.4	ENST00000677005.1	1802	13	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGATCCTGAGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4905289	4910704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910189_4910337_4910418
ENSMUSG00000083282.4_12	chr19	+	1691	13	FSM	ENSMUSG00000083282.4	ENST00000678471.1	1711	13	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGATCCTGAGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4905293	4910704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909433_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083282.4_6	chr19	+	1695	13	FSM	ENSMUSG00000083282.4	ENST00000310325.10	1714	13	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGATCCTGAGGTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	4905292	4910704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4905515_4905725_4905825_4906097_4906337_4906539_4906616_4907997_4908112_4908214_4908361_4908443_4908541_4908619_4908701_4909430_4909551_4909629_4909695_4909785_4909877_4910277_4910337_4910418
ENSMUSG00000083307.2_0	chrX	+	1235	1	FSM	ENSMUSG00000083307.2	ENSMUST00000121924.2	1257	1	20	2	20	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGTAGACTGTGGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	12803130	12804365	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12803100_12804400
ENSMUSG00000083317.2_0	chr2	+	495	4	FSM	ENSMUSG00000083317.2	ENSMUST00000122217.2	508	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGTAACCAAAGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	176724455	176730142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176724562_176728308_176728436_176728628_176728690_176729941
ENSMUSG00000083394.3_0	chr11	-	464	1	FSM	ENSMUSG00000083394.3	ENSMUST00000118352.3	483	1	13	6	13	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCTAATGTACGCAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	115615621	115615157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_115615200_115615600
ENSMUSG00000083424.4_0	chr2	-	423	1	FSM	ENSMUSG00000083424.4	ENSMUST00000121779.2	333	1	-56	-34	-56	34	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	108705659	108705236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_108705200_108705700
ENSMUSG00000083481.5_0	chr2	-	607	1	FSM	ENSMUSG00000083481.5	ENSMUST00000118709.2	624	1	5	12	5	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAATGAGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	175597394	175596787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175596800_175597400
ENSMUSG00000083596.5_0	chrX	-	419	1	FSM	ENSMUSG00000083596.5	ENSMUST00000121545.2	483	1	62	2	62	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTACACAAAGAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	149998583	149998164	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_149998200_149998600
ENSMUSG00000083621.2_0	chrX	-	439	1	FSM	ENSMUSG00000083621.2	ENSMUST00000119571.2	408	1	-12	-19	-12	19	mono-exon	FALSE	NA	NA	NA	NA	NA	416	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACCTGAAAACAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51861638	51861199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_51861200_51861600
ENSMUSG00000083669.6_0	chr7	-	323	1	FSM	ENSMUSG00000083669.6	ENSMUST00000121822.2	348	1	24	1	24	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTGGCCCCACTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	29664966	29664643	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29664600_29665000
ENSMUSG00000083674.4_0	chr2	+	1782	2	FSM	ENSMUSG00000083674.4	ENST00000538547.4	1798	2	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1888	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGATTTACACATGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	144301145	144308516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_144301325_144306913
ENSMUSG00000083705.3_0	chr11	-	648	2	FSM	ENSMUSG00000083705.3	ENSMUST00000165677.2	669	2	0	21	0	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTGAAAAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	117312543	117311483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117311954_117312365
ENSMUSG00000083773.5_0	chr2	-	1194	1	FSM	ENSMUSG00000083773.5	ENSMUST00000121658.2	1000	1	-18	-176	-18	176	mono-exon	FALSE	NA	NA	NA	NA	NA	213	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28824639	28823445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_28823400_28824600
ENSMUSG00000083833.5_0	chr5	-	468	1	FSM	ENSMUSG00000083833.5	ENSMUST00000118829.2	483	1	11	4	11	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAATGACTCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	115940207	115939739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115939700_115940200
ENSMUSG00000083844.9_0	chr11	+	1832	3	FSM	ENSMUSG00000083844.9	ENSMUST00000137510.8	1846	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGAATCTTTTTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5712135	5731869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5712241_5715508_5715572_5730205
ENSMUSG00000083844.9_1	chr11	+	1831	7	FSM	ENSMUSG00000083844.9	ENSMUST00000142942.8	1840	7	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTGACAATTGACATTT	NA	NA	NA	NA	NA	NA	NA	NA	5712151	5734703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_5712241_5715508_5715572_5718885_5719073_5719166_5719244_5730205_5730636_5732184_5732358_5733891
ENSMUSG00000083856.2_0	chr2	+	1156	1	FSM	ENSMUSG00000083856.2	ENSMUST00000117876.2	1183	1	20	7	20	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTAGGTGGTGGGGGGTG	NA	NA	NA	NA	NA	NA	NA	NA	104650543	104651699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104650500_104651700
ENSMUSG00000083899.3_0	chr11	+	2240	2	FSM	ENSMUSG00000083899.3	ENSMUST00000121455.3	2255	2	4	11	4	-11	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAGACTAAGTCACCAGA	NA	NA	NA	NA	NA	NA	NA	NA	77184273	77186713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_77185700_77185899
ENSMUSG00000083915.2_0	chr2	-	598	1	FSM	ENSMUSG00000083915.2	ENSMUST00000120873.2	610	1	1	11	1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATAAATAAGTTGGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	109622878	109622280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_109622300_109622900
ENSMUSG00000083992.2_0	chr11	-	598	1	FSM	ENSMUSG00000083992.2	ENSMUST00000117851.2	599	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCAATAAAGACTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	86521852	86521254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_86521300_86521900
ENSMUSG00000084067.4_0	chr2	-	237	1	FSM	ENSMUSG00000084067.4	ENSMUST00000120455.2	306	1	43	26	43	-26	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACGGGGGGTCACTCGACG	NA	NA	NA	NA	NA	NA	NA	NA	170305696	170305459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_170305500_170305700
ENSMUSG00000084106.5_0	chr1	-	874	1	FSM	ENSMUSG00000084106.5	ENSMUST00000120149.2	891	1	15	2	15	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	204	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGTTAACCTAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	86837390	86836516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_86836500_86837400
ENSMUSG00000084111.5_0	chr5	-	627	1	FSM	ENSMUSG00000084111.5	ENSMUST00000121821.2	636	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATAATTCTGTGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	92288788	92288161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_92288200_92288800
ENSMUSG00000084235.3_0	chr5	-	456	1	FSM	ENSMUSG00000084235.3	ENSMUST00000118224.2	399	1	22	-79	22	79	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTCTATAAAAAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	22733695	22733239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_22733200_22733700
ENSMUSG00000084319.4_0	chr6	-	657	1	FSM	ENSMUSG00000084319.4	ENSMUST00000121046.2	519	1	35	-173	35	173	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAGTGCATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	99855260	99854603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_99854600_99855300
ENSMUSG00000084323.5_0	chr2	+	612	1	FSM	ENSMUSG00000084323.5	ENSMUST00000121572.2	624	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAATGAGCCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	175112348	175112960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175112300_175113000
ENSMUSG00000084336.3_0	chr2	-	3514	2	FSM	ENSMUSG00000084336.3	ENSMUST00000214404.2	3535	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGAGTTTTATAAGTT	NA	NA	NA	NA	NA	NA	NA	NA	89951742	89946537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_89949966_89951656
ENSMUSG00000084336.3_1	chr2	-	3434	1	FSM	ENSMUSG00000084336.3	ENSMUST00000099756.5	1018	1	-6	-2410	-6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGTTTTATAAGTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	89949967	89946533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_89946500_89950000
ENSMUSG00000084349.4_0	chrX	+	1290	1	FSM	ENSMUSG00000084349.4	ENSMUST00000120557.2	1210	1	-26	-54	-26	54	mono-exon	FALSE	NA	NA	NA	NA	NA	340	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13068783	13070073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_13068800_13070100
ENSMUSG00000084381.2_0	chr11	+	478	1	FSM	ENSMUSG00000084381.2	ENSMUST00000121125.2	494	1	0	16	0	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAACTTAAGGCACG	NA	NA	NA	NA	NA	NA	NA	NA	4868509	4868987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_4868500_4869000
ENSMUSG00000084383.2_0	chr2	+	465	1	FSM	ENSMUSG00000084383.2	ENSMUST00000121309.2	483	1	14	4	14	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAATGTACACAAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	24876009	24876474	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24876000_24876500
ENSMUSG00000084416.4_0	chr1	-	708	1	FSM	ENSMUSG00000084416.4	ENSMUST00000120360.2	654	1	-27	-27	-27	27	mono-exon	FALSE	NA	NA	NA	NA	NA	849	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65033790	65033082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_65033100_65033800
ENSMUSG00000084497.3_0	chr15	-	96	1	FSM	ENSMUSG00000084497.3	ENSMUST00000122548.3	100	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCAACGCAGACTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	77724952	77724856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_77724900_77725000
ENSMUSG00000084593.3_0	chr4	-	101	1	FSM	ENSMUSG00000084593.3	ENSMUST00000122644.3	107	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTAAGAGGCCATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	108394794	108394693	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108394700_108394800
ENSMUSG00000084762.2_0	chr2	+	405	4	FSM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTAAACTCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	135490827	135493977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_135490892_135491052_135491123_135493417_135493478_135493766
ENSMUSG00000084762.2_3	chr2	+	343	3	ISM	ENSMUSG00000084762.2	ENSMUST00000146980.2	412	4	224	6	224	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTTAAACTCTGAGCCC	NA	NA	NA	NA	NA	NA	NA	NA	135491050	135493977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_135491123_135493417_135493478_135493766
ENSMUSG00000084772.2_0	chr6	-	1149	2	FSM	ENSMUSG00000084772.2	ENSMUST00000140746.2	1179	2	28	2	28	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGAATCCAGTTATCCGA	NA	NA	NA	NA	NA	NA	NA	NA	17064967	17058806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_17059579_17064590
ENSMUSG00000084781.2_0	chr2	+	1168	4	FSM	ENSMUSG00000084781.2	ENSMUST00000126002.2	1190	4	17	5	17	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTACCTTGTGAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	92239253	92262648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_92239757_92248071_92248277_92253157_92253372_92262402
ENSMUSG00000084786.10_0	chr9	+	2094	5	FSM	ENSMUSG00000084786.10	ENSMUST00000129414.9	2114	5	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAACTGGCTGTGTACCAC	NA	NA	NA	NA	NA	NA	NA	NA	20554626	20558253	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUSG00000084786.10_4	chr9	+	489	6	FSM	ENSMUSG00000084786.10	ENSMUST00000160682.8	489	6	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGCTGTCATACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	20555366	20558073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_20555435_20556119_20556190_20556488_20556556_20556701_20556786_20556917_20556956_20557911
ENSMUSG00000084799.8_0	chr1	+	435	2	FSM	ENSMUSG00000084799.8	ENST00000435627.1	458	2	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAAGGCAGGGCTGCCCGC	NA	NA	NA	NA	NA	NA	NA	NA	63153170	63153792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_63153423_63153609
ENSMUSG00000084817.4_0	chr1	-	550	1	FSM	ENSMUSG00000084817.4	ENSMUST00000153604.2	423	1	17	-144	17	144	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	45896897	45896347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_45896300_45896900
ENSMUSG00000084830.3_0	chrX	-	301	1	FSM	ENSMUSG00000084830.3	ENSMUST00000117527.2	174	1	-24	-103	-24	103	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTGGAAAAAAAAGATTAGA	NA	NA	NA	NA	NA	NA	NA	NA	20447577	20447276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_20447300_20447600
ENSMUSG00000084835.2_0	chr11	+	760	2	FSM	ENSMUSG00000084835.2	ENSMUST00000154452.2	760	2	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGCCCTCTGCCGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	98328862	98329872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_98329543_98329792
ENSMUSG00000084883.3_0	chr12	-	4273	6	FSM	ENSMUSG00000084883.3	ENSMUST00000222310.2	4298	6	19	6	19	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCGGAGCCGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	108241665	108169866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108172694_108173380_108173480_108174092_108174189_108177773_108177882_108187967_108188042_108240596
ENSMUSG00000084885.8_0	chrX	+	836	4	FSM	ENSMUSG00000084885.8	ENSMUST00000130625.8	876	4	32	8	32	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGCTCAACTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	151151600	151199686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_151151691_151152837_151153019_151186308_151186474_151199286
ENSMUSG00000084910.2_0	chr4	+	2566	3	FSM	ENSMUSG00000084910.2	ENSMUST00000122923.2	2581	3	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATGTACAACATCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	72119586	72133576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_72120508_72131069_72131342_72132203
ENSMUSG00000084925.9_0	chr14	+	745	6	FSM	ENSMUSG00000084925.9	ENSMUST00000141265.8	751	6	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTAAAAACATTTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	20596360	20620742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_20596413_20612053_20612165_20614848_20614908_20615078_20615116_20619937_20620091_20620409
ENSMUSG00000084925.9_1	chr14	+	678	5	ISM	ENSMUSG00000084925.9	ENSMUST00000141265.8	751	6	15699	15	15699	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAAGAACAATTTTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	20612059	20620733	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_20612165_20614848_20614908_20615078_20615116_20619937_20620091_20620409
ENSMUSG00000084938.2_0	chr2	-	1076	3	FSM	ENSMUSG00000084938.2	ENSMUST00000126549.2	1097	3	21	0	21	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTCGGGTTGTCTCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	57071745	57017490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_57018390_57018994_57019093_57071666
ENSMUSG00000084938.2_1	chr2	-	991	2	ISM	ENSMUSG00000084938.2	ENSMUST00000126549.2	1097	3	52672	8	52672	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTGTAATTCGGGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	57019094	57017498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_57018390_57018994
ENSMUSG00000084950.8_0	chr6	+	1400	2	FSM	ENSMUSG00000084950.8	ENSMUST00000134600.2	1434	2	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTAAAGTTATACTT	NA	NA	NA	NA	NA	NA	NA	NA	87957890	87961154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_87958078_87959941
ENSMUSG00000084957.4_0	chr19	-	2026	4	FSM	ENSMUSG00000084957.4	ENSMUST00000135402.4	2043	4	14	3	14	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAAAGAATCAACAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	53933044	53918294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932847
ENSMUSG00000084957.4_7	chr19	-	655	4	FSM	ENSMUSG00000084957.4	ENSMUST00000236370.2	662	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCATAACTACTGTTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	53932659	53919541	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53919934_53920560_53920637_53931896_53932011_53932586
ENSMUSG00000084992.2_0	chr5	-	837	3	FSM	ENSMUSG00000084992.2	ENSMUST00000156331.2	865	3	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACACACAAGCTAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	116166879	116164481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116165175_116166405_116166459_116166788
ENSMUSG00000084998.2_0	chr17	+	2942	5	FSM	ENSMUSG00000084998.2	ENSMUST00000149452.2	2945	5	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACAAAAACTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36207837	36223104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36207884_36215156_36215308_36219317_36219377_36220309_36220986_36221094
ENSMUSG00000084998.2_1	chr17	+	2898	4	ISM	ENSMUSG00000084998.2	ENSMUST00000149452.2	2945	5	7317	3	7317	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAACAAAAACTTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	36215154	36223104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_36215308_36219317_36219377_36220309_36220986_36221094
ENSMUSG00000085008.2_0	chr2	-	3993	7	FSM	ENSMUSG00000085008.2	ENSMUST00000150024.2	4020	7	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTCATACACAAAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	27052697	27034918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27037518_27042722_27042951_27046907_27047063_27050260_27050392_27051259_27051391_27051597_27051870_27052220
ENSMUSG00000085028.3_0	chr2	+	2944	3	FSM	ENSMUSG00000085028.3	ENSMUST00000127559.2	2976	3	15	17	15	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAATTAAAAATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	181026057	181029362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181026788_181027073_181028103_181028177
ENSMUSG00000085033.2_0	chr11	-	365	2	FSM	ENSMUSG00000085033.2	ENSMUST00000135857.2	397	2	21	11	21	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATAAAATCTCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	105942657	105941987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_105942192_105942496
ENSMUSG00000085081.2_0	chr11	-	1165	3	FSM	ENSMUSG00000085081.2	ENSMUST00000127450.2	1174	3	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTGAGGTCCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	119725190	119711645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_119712591_119716652_119716798_119725115
ENSMUSG00000085081.2_1	chr11	-	1085	2	ISM	ENSMUSG00000085081.2	ENSMUST00000127450.2	1174	3	8399	8	8399	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACTGAGGTCCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	119716792	119711645	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_119712591_119716652
ENSMUSG00000085103.4_0	chr2	-	488	4	NNC	ENSMUSG00000085103.4	novel	474	3	NA	NA	-3847	-11	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCCTATGAATGTAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	175863506	175857826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_175858023_175859274_175859336_175859528_175859656_175863402
ENSMUSG00000085112.2_0	chr4	+	1805	7	FSM	ENSMUSG00000085112.2	ENSMUST00000151122.2	1852	7	28	19	28	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAAAATTTAAAAAACAT	NA	NA	NA	NA	NA	NA	NA	NA	16164137	16266206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_16164192_16172824_16172985_16210860_16210911_16241964_16242037_16252459_16252570_16254743_16254816_16264919
ENSMUSG00000085114.2_0	chrX	+	647	2	FSM	ENSMUSG00000085114.2	ENSMUST00000138262.2	666	2	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATGCGAATAACATATA	NA	NA	NA	NA	NA	NA	NA	NA	55363034	55364874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_55363107_55364299
ENSMUSG00000085133.3_0	chr14	+	4682	2	FSM	ENSMUSG00000085133.3	ENSMUST00000130256.3	4715	2	27	6	27	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGATTTCTGGCCTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	121486144	121491377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_121486390_121486940
ENSMUSG00000085148.2_0	chr11	+	1723	3	FSM	ENSMUSG00000085148.2	ENSMUST00000149940.2	1752	3	6	23	6	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATACAAAAGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	75352370	75357479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_75352582_75354518_75354684_75356132
ENSMUSG00000085156.9_0	chr11	-	587	4	FSM	ENSMUSG00000085156.9	ENSMUST00000147762.9	611	4	16	8	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCAGCTGTGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	6478763	6475598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6475818_6476354_6476438_6478305_6478375_6478547
ENSMUSG00000085156.9_1	chr11	-	1610	2	FSM	ENSMUSG00000085156.9	ENSMUST00000129570.3	1631	2	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCCAGCTGTGTTGATC	NA	NA	NA	NA	NA	NA	NA	NA	6477745	6475598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6475818_6476354
ENSMUSG00000085169.3_0	chr16	+	1578	6	FSM	ENSMUSG00000085169.3	ENSMUST00000156242.2	1583	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACCAAATTCACACAATAT	NA	NA	NA	NA	NA	NA	NA	NA	91485798	91512525	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91486169_91505665_91505779_91506722_91506787_91507037_91507149_91510939_91511039_91511704
ENSMUSG00000085175.8_0	chr11	-	660	3	FSM	ENSMUSG00000085175.8	ENSMUST00000152784.8	686	3	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCTTAAAAGGAAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	82671854	82670438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_82670762_82670960_82671125_82671681
ENSMUSG00000085208.4_0	chr11	+	4404	2	FSM	ENSMUSG00000085208.4	ENSMUST00000128960.2	4423	2	14	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCACCATGCATGATACG	NA	NA	NA	NA	NA	NA	NA	NA	86092209	86102013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86092379_86097778
ENSMUSG00000085208.4_1	chr11	+	2571	7	FSM	ENSMUSG00000085208.4	ENSMUST00000143819.2	2604	7	24	9	24	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGAGTATCACTACTTGT	NA	NA	NA	NA	NA	NA	NA	NA	86092232	86195260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_86092379_86097778_86098138_86174964_86175062_86175895_86176098_86177266_86177734_86181961_86182049_86194047
ENSMUSG00000085213.2_0	chr4	-	445	3	FSM	ENSMUSG00000085213.2	ENSMUST00000128800.2	469	3	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCTAAGGAATTCAAG	NA	NA	NA	NA	NA	NA	NA	NA	150652985	150651333	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_150651550_150652673_150652787_150652869
ENSMUSG00000085227.2_0	chr5	+	719	3	FSM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	15	9	-11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAGCATGAGGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	138262319	138264914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138262364_138264018_138264268_138264488
ENSMUSG00000085227.2_1	chr5	+	1258	2	FSM	ENSMUSG00000085227.2	ENSMUST00000125662.2	1267	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAGCATGAGGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	138262330	138264914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_138262364_138263689
ENSMUSG00000085227.2_2	chr5	+	1215	1	NIC	ENSMUSG00000085227.2	novel	743	3	NA	NA	1369	-9	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAGCATGAGGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	138263699	138264914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_+_138263700_138264900
ENSMUSG00000085227.2_3	chr5	+	670	2	ISM	ENSMUSG00000085227.2	ENSMUST00000124298.2	743	3	1719	9	1693	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAGCATGAGGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	138264023	138264914	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_138264268_138264488
ENSMUSG00000085237.3_0	chr5	-	742	2	FSM	ENSMUSG00000085237.3	ENSMUST00000202229.2	767	2	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAAATCTTGTTCCGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	148933299	148891438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148892012_148933130
ENSMUSG00000085241.8_0	chr4	-	377	2	ISM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	941	6	644	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTTTTCCTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	132080003	132079250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_132079555_132079930
ENSMUSG00000085241.8_1	chr4	-	420	3	FSM	ENSMUSG00000085241.8	ENSMUST00000151374.2	426	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTCTTTTCCTGTGATTT	NA	NA	NA	NA	NA	NA	NA	NA	132080944	132079250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132079555_132079930_132080010_132080907
ENSMUSG00000085256.2_0	chr4	-	662	3	FSM	ENSMUSG00000085256.2	ENSMUST00000141893.2	691	3	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCGAAACTATCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	109834990	109833943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_109833967_109834123_109834311_109834538
ENSMUSG00000085256.2_2	chr4	-	617	2	ISM	ENSMUSG00000085256.2	ENSMUST00000141893.2	691	3	42	189	42	-189	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACAAGTTCGAATTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	109834968	109834123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_109834311_109834538
ENSMUSG00000085260.8_0	chr11	-	499	2	FSM	ENSMUSG00000085260.8	ENSMUST00000146334.2	527	2	19	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAGAAACTCTGGAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	59838949	59837723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_59837923_59838649
ENSMUSG00000085287.9_0	chr17	-	1477	5	FSM	ENSMUSG00000085287.9	ENSMUST00000146560.9	1495	5	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTCTTGTGGCTGAT	NA	NA	NA	NA	NA	NA	NA	NA	87590228	87582352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87582799_87583873_87583903_87584839_87585011_87587986_87588191_87589601
ENSMUSG00000085289.2_0	chr18	-	3865	4	FSM	ENSMUSG00000085289.2	ENSMUST00000135378.2	3888	4	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATCACAAAAAGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	39522463	39500098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_39503370_39504047_39504329_39516133_39516335_39522351
ENSMUSG00000085334.8_0	chr4	+	1959	3	FSM	ENSMUSG00000085334.8	ENSMUST00000137236.2	1970	3	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATGAGCCTTAGGTACT	NA	NA	NA	NA	NA	NA	NA	NA	126929479	126943186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_126929648_126930355_126930443_126941482
ENSMUSG00000085347.2_0	chr10	+	1197	2	FSM	ENSMUSG00000085347.2	ENSMUST00000143122.2	1218	2	14	7	-1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCATCTGATTCTGTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	62176399	62186299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_62176563_62185265
ENSMUSG00000085355.3_0	chr6	+	1729	2	NIC	ENSMUSG00000085355.3	novel	1729	5	NA	NA	4	-6	intron_retention	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGAAATGGTCCATTCA	NA	NA	NA	NA	NA	NA	NA	NA	148846368	148848613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr6_+_148847919_148848434
ENSMUSG00000085385.8_0	chr2	-	3135	1	FSM	ENSMUSG00000085385.8	ENSMUST00000186993.2	3144	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAAGCTTGGTCTCGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	158198759	158195624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_158195600_158198800
ENSMUSG00000085385.8_1	chr2	-	1526	6	FSM	ENSMUSG00000085385.8	ENSMUST00000141809.8	1553	6	27	0	-8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAAACTGGTAAAGAG	NA	NA	NA	NA	NA	NA	NA	NA	158203403	158197226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_158197962_158199117_158199184_158201101_158201353_158202378_158202520_158202862_158203117_158203324
ENSMUSG00000085395.2_0	chr4	+	531	2	FSM	ENSMUSG00000085395.2	ENSMUST00000142429.2	564	2	8	25	8	-25	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAATGGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	141005757	141007080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141005856_141006647
ENSMUSG00000085396.8_0	chrX	-	1139	7	NIC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	4	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTTCGTAAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	49724134	49644621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_49644807_49647107_49647262_49670279_49670434_49684337_49684493_49715313_49715387_49719767_49719873_49723821
ENSMUSG00000085396.8_1	chrX	-	1135	7	NIC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTTCGTAAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	49724138	49644621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_49644807_49647107_49647262_49701581_49701728_49704237_49704393_49715313_49715387_49719767_49719873_49723821
ENSMUSG00000085396.8_2	chrX	-	1143	7	NIC	ENSMUSG00000085396.8	novel	1145	7	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTTCGTAAATTATTG	NA	NA	NA	NA	NA	NA	NA	NA	49724138	49644621	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_49644807_49647107_49647262_49670279_49670434_49704237_49704393_49715313_49715387_49719767_49719873_49723821
ENSMUSG00000085396.8_5	chrX	-	719	5	FSM	ENSMUSG00000085396.8	ENSMUST00000143999.8	720	5	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACACTTCTTCCCAGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	49724198	49704272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_49704393_49715313_49715387_49716083_49716128_49719767_49719873_49723821
ENSMUSG00000085396.8_6	chrX	-	692	5	FSM	ENSMUSG00000085396.8	ENSMUST00000136518.8	715	5	20	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGGTGCTGCTGGATC	NA	NA	NA	NA	NA	NA	NA	NA	49724168	49704328	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_49704393_49715313_49715387_49716083_49716187_49719767_49719873_49723821
ENSMUSG00000085399.8_0	chr4	+	2891	4	FSM	ENSMUSG00000085399.8	ENSMUST00000123272.2	2908	4	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGCAAAGAAAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	114766465	114778310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_114766856_114769366_114771072_114773385_114773508_114777636
ENSMUSG00000085399.8_1	chr4	+	997	5	FSM	ENSMUSG00000085399.8	ENSMUST00000144002.8	1015	5	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGAATATTTTGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	114766464	114779157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_114766856_114773385_114773508_114777636_114777753_114778256_114778433_114778965
ENSMUSG00000085408.2_0	chr4	-	2397	3	FSM	ENSMUSG00000085408.2	ENSMUST00000142815.2	2436	3	29	10	29	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACAGCAGCCGGGCGTGG	NA	NA	NA	NA	NA	NA	NA	NA	116454798	116446939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_116447471_116450039_116450146_116453038
ENSMUSG00000085419.2_0	chr11	+	717	5	FSM	ENSMUSG00000085419.2	ENSMUST00000132261.2	728	5	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACCGAGGGCTGATCTGC	NA	NA	NA	NA	NA	NA	NA	NA	117414428	117423020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_117414609_117414780_117414875_117419791_117419930_117422465_117422660_117422909
ENSMUSG00000085438.2_0	chr2	+	8281	3	FSM	ENSMUSG00000085438.2	ENSMUST00000153581.2	8300	3	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGATTGTGTGTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	119424794	119437975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119424916_119426739_119426993_119430068
ENSMUSG00000085457.4_0	chr13	+	767	5	FSM	ENSMUSG00000085457.4	ENSMUST00000181800.2	777	5	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCTGAATCTCTTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	34120018	34144158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_34120081_34137299_34137525_34138689_34138809_34142583_34142642_34143855
ENSMUSG00000085457.4_1	chr13	+	704	4	ISM	ENSMUSG00000085457.4	ENSMUST00000181800.2	777	5	17287	5	17287	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAATCTCTTATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	34137301	34144159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_34137525_34138689_34138809_34142583_34142642_34143855
ENSMUSG00000085492.8_0	chr17	-	2534	7	FSM	ENSMUSG00000085492.8	ENSMUST00000137830.8	2572	7	23	15	23	-15	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATGTATAAACAAAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	71905718	71864071	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71865339_71868332_71868433_71875604_71875666_71876751_71876888_71895832_71895980_71897482_71897518_71904930
ENSMUSG00000085525.8_0	chr4	+	316	3	FSM	ENSMUSG00000085525.8	ENSMUST00000144166.8	326	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTCCAGGTCAGTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	146206900	146214994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_146207052_146209452_146209546_146214922
ENSMUSG00000085546.2_0	chr2	-	3173	3	FSM	ENSMUSG00000085546.2	ENSMUST00000131801.2	3215	3	36	6	36	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTAATTGTGACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	156181265	156174242	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156176535_156176964_156177376_156180795
ENSMUSG00000085569.2_0	chr4	-	702	4	FSM	ENSMUSG00000085569.2	ENSMUST00000154352.2	707	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAGCTGGATACACAAG	NA	NA	NA	NA	NA	NA	NA	NA	89046463	89018905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_89019277_89023587_89023641_89036698_89036913_89046399
ENSMUSG00000085569.2_1	chr4	-	634	3	ISM	ENSMUSG00000085569.2	ENSMUST00000154352.2	707	4	9555	5	9510	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAGCTGGATACACAAG	NA	NA	NA	NA	NA	NA	NA	NA	89036908	89018905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_89019277_89023587_89023641_89036698
ENSMUSG00000085569.2_2	chr4	-	428	2	FSM	ENSMUSG00000085569.2	ENSMUST00000138655.2	430	2	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCCTCTCCTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	89046418	89042162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_89042572_89046399
ENSMUSG00000085569.2_3	chr4	-	400	1	ISM	ENSMUSG00000085569.2	ENSMUST00000138655.2	430	2	3858	0	3858	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTCTCCTCTCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	89042560	89042160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_89042200_89042600
ENSMUSG00000085589.8_0	chr6	-	2201	5	FSM	ENSMUSG00000085589.8	ENSMUST00000154066.2	2233	5	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	86457780	86447786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86449472_86449774_86449884_86451764_86451929_86452650_86452761_86457647
ENSMUSG00000085604.2_0	chr11	+	1570	6	FSM	ENSMUSG00000085604.2	ENSMUST00000137154.2	1594	6	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATAGCTTTTTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	100578262	100588342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_100578873_100580910_100580989_100581077_100581266_100581556_100581637_100581764_100581888_100587851
ENSMUSG00000085614.2_0	chr4	+	766	5	FSM	ENSMUSG00000085614.2	ENSMUST00000146154.2	770	5	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTCTCTGGACCCC	NA	NA	NA	NA	NA	NA	NA	NA	11966577	11993999	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_11966684_11976443_11976588_11977456_11977571_11980141_11980409_11993864
ENSMUSG00000085622.10_0	chr12	-	1047	3	FSM	ENSMUSG00000085622.10	ENSMUST00000136690.3	1063	3	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGTAGTTCATAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	71062594	71056572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_71057254_71061229_71061282_71062280
ENSMUSG00000085635.2_0	chrX	-	2475	2	FSM	ENSMUSG00000085635.2	ENSMUST00000140021.2	2494	2	2	17	2	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAAATATCTAATA	NA	NA	NA	NA	NA	NA	NA	NA	37826637	37794374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_37796753_37826540
ENSMUSG00000085635.2_1	chrX	-	2396	1	NIC	ENSMUSG00000085635.2	novel	2494	2	NA	NA	29885	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAGAAAGAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37796754	37794358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_37794400_37796800
ENSMUSG00000085636.2_0	chr11	+	1644	2	FSM	ENSMUSG00000085636.2	ENSMUST00000140273.2	1657	2	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAGAGAGAGAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	120041390	120043157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_120041541_120041663
ENSMUSG00000085645.2_0	chr11	-	226	2	FSM	ENSMUSG00000085645.2	ENST00000466037.6	240	2	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGCCATTACCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	96191716	96184281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_96184381_96191589
ENSMUSG00000085665.2_0	chr11	+	3078	2	FSM	ENSMUSG00000085665.2	ENSMUST00000128996.2	3105	2	23	4	23	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAGAAACAAGTGTCAGC	NA	NA	NA	NA	NA	NA	NA	NA	23018020	23025570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_23018407_23022878
ENSMUSG00000085667.2_6	chr4	-	4472	5	FSM	ENSMUSG00000085667.2	ENSMUST00000124738.2	4493	5	10	11	10	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATGAACAAACAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131647330	131626799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_131630673_131635182_131635302_131638519_131638670_131642754_131642833_131647078
ENSMUSG00000085675.2_0	chr11	-	1267	1	ISM	ENSMUSG00000085675.2	ENSMUST00000143311.2	1340	2	24503	7	24503	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTCCAAAAACAAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	18418752	18417485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_18417500_18418800
ENSMUSG00000085675.2_1	chr11	-	1333	2	FSM	ENSMUSG00000085675.2	ENSMUST00000143311.2	1340	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTCCAAAAACAAAATGAC	NA	NA	NA	NA	NA	NA	NA	NA	18443255	18417485	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_18418760_18443196
ENSMUSG00000085696.9_7	chr6	+	1926	2	FSM	ENSMUSG00000085696.9	ENST00000524304.1	1940	2	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTATGACCCTTTCCCCA	NA	NA	NA	NA	NA	NA	NA	NA	52187970	52190454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52189468_52190025
ENSMUSG00000085696.9_8	chr6	+	3672	2	FSM	ENSMUSG00000085696.9	ENST00000518947.6	3689	2	7	10	7	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCATTAATTGGGCCATA	NA	NA	NA	NA	NA	NA	NA	NA	52190037	52193779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52193587_52193656
ENSMUSG00000085702.9_0	chr3	+	5490	4	FSM	ENSMUSG00000085702.9	ENSMUST00000125611.8	5510	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACAAACAGCAGATACCC	NA	NA	NA	NA	NA	NA	NA	NA	30066547	30108957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_30066772_30072205_30072332_30074619_30074703_30103900
ENSMUSG00000085704.2_0	chr2	+	1897	2	FSM	ENSMUSG00000085704.2	ENSMUST00000150145.2	1905	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AATTAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	179618649	179620802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_179618986_179619241
ENSMUSG00000085715.3_0	chrX	+	4280	4	FSM	ENSMUSG00000085715.3	ENSMUST00000152916.2	4306	4	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACACCTCCATTCCTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	102475137	102528552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_102475308_102491249_102491578_102491810_102491921_102524880
ENSMUSG00000085741.9_0	chr2	-	1363	3	NNC	ENSMUSG00000085741.9	novel	904	2	NA	NA	8746	4320	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAACTTTGTGCAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	156696068	156681950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_156682065_156686072_156686300_156695046
ENSMUSG00000085741.9_4	chr2	-	885	2	FSM	ENSMUSG00000085741.9	ENSMUST00000185402.2	904	2	15	4	-3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAGACTTAGCTTCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	156704868	156686274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156686810_156704518
ENSMUSG00000085741.9_5	chr2	-	1391	3	FSM	ENSMUSG00000085741.9	ENSMUST00000153616.9	1431	3	32	8	32	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAAATAAAATAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	156704782	156694357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156694611_156695350_156696225_156704518
ENSMUSG00000085748.2_0	chr11	-	1587	2	FSM	ENSMUSG00000085748.2	ENSMUST00000155836.2	1624	2	24	13	24	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATAAATCTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62457185	62455315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62456701_62456983
ENSMUSG00000085765.2_0	chr11	-	2607	1	NIC	ENSMUSG00000085765.2	novel	2669	2	NA	NA	256	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAGAACACAATGCCTA	NA	NA	NA	NA	NA	NA	NA	NA	74929918	74927311	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr11_-_74927300_74929900
ENSMUSG00000085765.2_1	chr11	-	2663	2	FSM	ENSMUSG00000085765.2	ENSMUST00000155508.2	2669	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACACAATGCCTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	74930174	74927307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_74929915_74930118
ENSMUSG00000085766.2_0	chr2	-	3406	2	FSM	ENSMUSG00000085766.2	ENSMUST00000154246.2	3416	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCATCCCCAGGTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	27777058	27772940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_27776126_27776837
ENSMUSG00000085781.2_0	chr16	+	518	2	FSM	ENSMUSG00000085781.2	ENSMUST00000152070.2	527	2	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCATAGCCAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45756685	45759633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_45756792_45759221
ENSMUSG00000085793.3_0	chr12	+	2255	6	FSM	ENSMUSG00000085793.3	ENSMUST00000137170.3	2270	6	12	3	12	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGGAGGCCCAGGTTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	84498207	84578344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84498318_84503014_84503090_84504722_84504761_84506392_84506460_84509142_84509227_84576463
ENSMUSG00000085795.9_0	chr8	+	3140	2	FSM	ENSMUSG00000085795.9	ENSMUST00000154256.3	3152	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCACACCGTGGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	27467387	27471483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_27467640_27468595
ENSMUSG00000085803.2_0	chr11	+	1244	3	FSM	ENSMUSG00000085803.2	ENSMUST00000148364.2	1257	3	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGATTATATGGTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22684040	22687927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_22684201_22685598_22685684_22686928
ENSMUSG00000085829.2_0	chr14	-	882	3	FSM	ENSMUSG00000085829.2	ENSMUST00000131222.2	902	3	9	11	9	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATACCATTAATAGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	76082395	76080829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_76081423_76081990_76082098_76082213
ENSMUSG00000085840.2_0	chr4	-	820	2	FSM	ENSMUSG00000085840.2	ENSMUST00000132470.2	838	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTGTTATAGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78579812	78578099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_78578385_78579277
ENSMUSG00000085843.2_0	chr4	+	2223	3	FSM	ENSMUSG00000085843.2	ENSMUST00000133455.2	2251	3	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTCTGCCTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	98682032	98687137	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_98682120_98684245_98684324_98685079
ENSMUSG00000085881.3_0	chr13	-	570	3	FSM	ENSMUSG00000085881.3	ENSMUST00000128914.2	578	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAATTAAATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74157471	74156276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74156584_74156937_74157114_74157384
ENSMUSG00000085881.3_1	chr13	-	475	2	ISM	ENSMUSG00000085881.3	ENSMUST00000128914.2	578	3	368	6	368	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCCAATTAAATGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	74157105	74156276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_74156584_74156937
ENSMUSG00000085894.2_0	chr1	-	1827	3	FSM	ENSMUSG00000085894.2	ENSMUST00000146314.2	1832	3	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGTCTCAAGATTATAT	NA	NA	NA	NA	NA	NA	NA	NA	39591079	39586651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_39586743_39588006_39588198_39589534
ENSMUSG00000085912.3_1	chr17	-	3198	2	FSM	ENSMUSG00000085912.3	ENSMUST00000133221.3	3218	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATAAACAGTCCAAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	29298140	29276410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29279333_29297864
ENSMUSG00000085929.2_0	chr2	+	780	2	FSM	ENSMUSG00000085929.2	ENSMUST00000142511.2	803	2	19	4	19	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACACAGGCTGGTCCCT	NA	NA	NA	NA	NA	NA	NA	NA	27430456	27433370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27430607_27432740
ENSMUSG00000085931.2_0	chr4	-	644	6	FSM	ENSMUSG00000085931.2	ENSMUST00000126270.2	656	6	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACATGACGTTCAAATT	NA	NA	NA	NA	NA	NA	NA	NA	94313820	93977819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_93977981_93978813_93978868_94034676_94034806_94043188_94043282_94140779_94140875_94313708
ENSMUSG00000085936.8_0	chr13	-	1258	3	FSM	ENSMUSG00000085936.8	ENSMUST00000134787.8	1275	3	3	14	3	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCCTACAAAAATGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	28705088	28644030	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_28645045_28689688_28689897_28705052
ENSMUSG00000085936.8_1	chr13	-	1228	2	ISM	ENSMUSG00000085936.8	ENSMUST00000154298.2	433	4	10867	-898	6957	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAATGTAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	28689897	28644025	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_28645045_28689688
ENSMUSG00000085936.8_2	chr13	-	1831	8	FSM	ENSMUSG00000085936.8	ENSMUST00000148885.8	1870	8	30	9	30	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGTATGCAATTGATTC	NA	NA	NA	NA	NA	NA	NA	NA	29069573	28644769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_28645045_28745423_28745563_28792500_28792612_28852352_28852688_28853764_28853978_28956601_28956650_29067297_29067561_29069126
ENSMUSG00000085956.2_0	chr3	+	1066	2	FSM	ENSMUSG00000085956.2	ENSMUST00000128160.2	1089	2	14	9	14	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATATCCACCTGCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	94922949	94924378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_94923589_94923951
ENSMUSG00000085971.5_0	chr5	-	3480	4	FSM	ENSMUSG00000085971.5	ENSMUST00000133243.5	3488	4	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCTATTATTGTACACT	NA	NA	NA	NA	NA	NA	NA	NA	148952615	148932460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148935271_148936240_148936439_148936680_148936782_148952244
ENSMUSG00000085995.3_0	chr7	+	1363	2	FSM	ENSMUSG00000085995.3	ENSMUST00000147173.2	1390	2	18	9	18	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACAGCGAGATTCCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	48531065	48536347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_48531266_48535184
ENSMUSG00000086003.8_0	chr11	+	692	6	FSM	ENSMUSG00000086003.8	ENSMUST00000132584.8	695	6	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTAGTGTTTACCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	94024310	94046599	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_94024382_94029312_94029490_94040661_94040792_94042163_94042239_94046281_94046324_94046402
ENSMUSG00000086003.8_1	chr11	+	603	5	ISM	ENSMUSG00000086003.8	ENSMUST00000132584.8	695	6	5016	7	2841	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCGTATTAGTGTTTACCT	NA	NA	NA	NA	NA	NA	NA	NA	94029326	94046595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_94029490_94040661_94040792_94042163_94042239_94046281_94046324_94046402
ENSMUSG00000086013.2_0	chr6	+	875	2	FSM	ENSMUSG00000086013.2	ENSMUST00000139612.2	899	2	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTGTGAGAGTGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	145196270	145197567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_145196516_145196937
ENSMUSG00000086021.2_0	chr6	-	528	3	FSM	ENSMUSG00000086021.2	ENSMUST00000153786.2	544	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCCATATCATGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	147145285	147144026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_147144363_147144498_147144542_147145136
ENSMUSG00000086029.8_0	chr2	-	300	2	FSM	ENSMUSG00000086029.8	ENST00000643931.1	324	2	14	10	14	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGAAGTTGGTTAGGC	NA	NA	NA	NA	NA	NA	NA	NA	105500802	105410947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105411026_105500580
ENSMUSG00000086029.8_1	chr2	-	827	3	FSM	ENSMUSG00000086029.8	ENST00000643436.1	840	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAACATCATGTAATTGGT	NA	NA	NA	NA	NA	NA	NA	NA	105504800	105489513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_105490012_105500580_105500751_105504641
ENSMUSG00000086050.2_0	chr11	-	2937	2	FSM	ENSMUSG00000086050.2	ENSMUST00000123882.2	2969	2	25	7	25	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGTCAACTTGATGAGCC	NA	NA	NA	NA	NA	NA	NA	NA	117154238	117148481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_117149181_117152000
ENSMUSG00000086053.2_0	chr1	-	439	2	FSM	ENSMUSG00000086053.2	ENSMUST00000132100.2	472	2	25	8	25	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATTTTTCTGGATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	75372982	75368782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_75369090_75372850
ENSMUSG00000086061.8_0	chr4	+	1612	4	FSM	ENSMUSG00000086061.8	ENSMUST00000149247.2	1621	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAGTAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	141126167	141138493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_141126197_141135053_141135144_141136648_141136832_141137183
ENSMUSG00000086061.8_1	chr4	+	1562	3	ISM	ENSMUSG00000086061.8	ENSMUST00000149247.2	1621	4	8907	9	8907	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACAGTAACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	141135074	141138493	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_141135144_141136648_141136832_141137183
ENSMUSG00000086067.2_0	chr8	-	1193	5	FSM	ENSMUSG00000086067.2	ENSMUST00000127527.2	1193	5	0	0	0	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCTGTGTGATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	85343813	85337830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85338454_85338963_85339091_85342218_85342482_85342831_85342931_85343732
ENSMUSG00000086067.2_1	chr8	-	1103	4	ISM	ENSMUSG00000086067.2	ENSMUST00000127527.2	1193	5	892	0	892	0	3prime_fragment	FALSE	non_canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCTGTGTGATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	85342921	85337830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_85338454_85338963_85339091_85342218_85342482_85342831
ENSMUSG00000086130.2_0	chr4	-	1614	2	FSM	ENSMUSG00000086130.2	ENSMUST00000147722.2	1620	2	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGTTGCAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	147755307	147752976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147754501_147755217
ENSMUSG00000086130.2_1	chr4	-	1522	1	ISM	ENSMUSG00000086130.2	ENSMUST00000147722.2	1620	2	813	2	813	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCAGTTGCAATTGAAG	NA	NA	NA	NA	NA	NA	NA	NA	147754498	147752976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_147753000_147754500
ENSMUSG00000086158.3_0	chr9	-	696	2	FSM	ENSMUSG00000086158.3	ENSMUST00000124565.3	711	2	4	11	4	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCAAAACACTTTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	72892654	72887014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_72887479_72892422
ENSMUSG00000086224.9_0	chr3	-	1010	3	FSM	ENSMUSG00000086224.9	ENSMUST00000128815.9	1020	3	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTGGATATTTAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	5285877	5242649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5243450_5244039_5244102_5285729
ENSMUSG00000086224.9_1	chr3	-	420	2	FSM	ENSMUSG00000086224.9	ENST00000518143.2	441	2	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCACACACATGGGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	5285952	5275379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_5275577_5285729
ENSMUSG00000086240.5_0	chr1	-	435	1	FSM	ENSMUSG00000086240.5	ENSMUST00000145844.3	274	1	32	-193	32	193	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	28619821	28619386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_28619400_28619800
ENSMUSG00000086247.8_0	chr5	-	1244	3	FSM	ENSMUSG00000086247.8	ENSMUST00000130892.8	1250	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTACCACATGTGTAGTC	NA	NA	NA	NA	NA	NA	NA	NA	110324364	110315373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110316351_110318128_110318214_110324182
ENSMUSG00000086272.2_0	chr4	-	1371	3	FSM	ENSMUSG00000086272.2	ENSMUST00000141582.2	1371	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTTTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154034960	154032089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_154033295_154034549_154034644_154034888
ENSMUSG00000086272.2_1	chr4	-	1299	2	ISM	ENSMUSG00000086272.2	ENSMUST00000141582.2	1371	3	317	0	317	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGGCTTTGGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	154034643	154032089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_154033295_154034549
ENSMUSG00000086283.8_0	chr11	-	1023	4	FSM	ENSMUSG00000086283.8	ENSMUST00000154798.8	1045	4	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAACAAGAAATGGAGA	NA	NA	NA	NA	NA	NA	NA	NA	102515236	102510637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_102511287_102512303_102512397_102512883_102513032_102515103
ENSMUSG00000086290.10_0	chr4	+	1377	2	FSM	ENSMUSG00000086290.10	ENSMUST00000137343.9	1416	2	35	4	34	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTCCTCTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	132036022	132038329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132036219_132037148
ENSMUSG00000086290.10_1	chr4	+	592	5	FSM	ENSMUSG00000086290.10	ENSMUST00000153474.9	606	5	8	6	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTCCTCTTTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	132035996	132038329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132036219_132037148_132037215_132037461_132037527_132037761_132037816_132038144
ENSMUSG00000086296.3_0	chr9	+	4319	2	FSM	ENSMUSG00000086296.3	ENSMUST00000150953.2	4325	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTAAAGTTAATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	106032150	106036944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_106033717_106034191
ENSMUSG00000086308.2_0	chr2	+	764	5	FSM	ENSMUSG00000086308.2	ENSMUST00000152412.2	796	5	25	7	25	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGGTATTTGTGTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	115897730	115916385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_115897822_115898664_115898732_115913276_115913728_115915895_115915941_115916275
ENSMUSG00000086308.2_1	chr2	+	3375	2	FSM	ENSMUSG00000086308.2	ENSMUST00000156095.2	3398	2	8	15	8	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGTTAAATGGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	115898456	115916376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_115898732_115913276
ENSMUSG00000086316.9_0	chrX	+	771	4	FSM	ENSMUSG00000086316.9	ENSMUST00000140575.8	788	4	9	8	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACCCATTAATGTCCAA	NA	NA	NA	NA	NA	NA	NA	NA	152506594	152524252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152506934_152508700_152508838_152511857_152511936_152524035
ENSMUSG00000086316.9_3	chrX	+	1324	3	FSM	ENSMUSG00000086316.9	ENSMUST00000185492.7	1346	3	11	11	-6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATAATAACTTCCATTC	NA	NA	NA	NA	NA	NA	NA	NA	152506616	152524905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152506934_152508700_152508838_152524035
ENSMUSG00000086316.9_4	chrX	+	771	3	FSM	ENSMUSG00000086316.9	ENSMUST00000149514.8	775	3	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTTGTGACCCCTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	152506625	152512183	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_152506934_152508700_152508838_152511857
ENSMUSG00000086322.8_2	chr4	+	1166	3	FSM	ENSMUSG00000086322.8	ENST00000448923.2	1174	3	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCGGGGCGTGAGCGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	133971102	133973020	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_133971287_133971545_133971725_133972217
ENSMUSG00000086342.2_0	chr4	-	607	2	FSM	ENSMUSG00000086342.2	ENSMUST00000143705.2	620	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGTTTCTTTTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	124978732	124976654	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_124976857_124978327
ENSMUSG00000086354.3_1	chr2	+	1382	5	FSM	ENSMUSG00000086354.3	ENST00000456053.5	1392	5	4	6	4	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGTAGCATGAGTATTA	NA	NA	NA	NA	NA	NA	NA	NA	76604785	76628107	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_76604870_76615434_76615535_76621413_76622167_76623150_76623203_76627714
ENSMUSG00000086370.10_0	chrX	-	4270	11	FSM	ENSMUSG00000086370.10	ENSMUST00000130063.8	4275	11	5	0	5	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTTTGCCATGTT	NA	NA	NA	NA	NA	NA	NA	NA	102667355	102604512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_102607574_102608135_102608179_102639536_102639614_102646647_102646696_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102656628_102656802_102658670_102658799_102667152
ENSMUSG00000086370.10_1	chrX	-	3260	17	FSM	ENSMUSG00000086370.10	ENSMUST00000237368.2	3300	17	25	15	-11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAAATATAACATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	102667371	102613186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_102614482_102616105_102616168_102624074_102624228_102625507_102625622_102628288_102628417_102631717_102631778_102635408_102635513_102639536_102639614_102646647_102646696_102649063_102649226_102649923_102649989_102650529_102650633_102651142_102651399_102652909_102653023_102656628_102656802_102658670_102658799_102667152
ENSMUSG00000086382.2_0	chr2	+	655	2	FSM	ENSMUSG00000086382.2	ENSMUST00000125413.2	680	2	9	16	9	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATGAGAAAAAAAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	73415202	73419515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_73415550_73419207
ENSMUSG00000086391.2_0	chr11	+	1064	4	FSM	ENSMUSG00000086391.2	ENSMUST00000151032.2	1075	4	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTTGTAAATATTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	11818131	11835319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_11818200_11820963_11821157_11832956_11833080_11834639
ENSMUSG00000086401.2_0	chr5	+	2247	2	FSM	ENSMUSG00000086401.2	ENSMUST00000132267.2	2260	2	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAATGTCAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	110918821	110927120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110919129_110925180
ENSMUSG00000086413.2_0	chr4	+	468	2	FSM	ENSMUSG00000086413.2	ENSMUST00000141637.2	512	2	39	5	39	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTATGTGCTACCATGT	NA	NA	NA	NA	NA	NA	NA	NA	84659750	84660523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_84660123_84660427
ENSMUSG00000086427.9_0	chr6	+	1536	5	FSM	ENSMUSG00000086427.9	ENST00000522863.2	1549	5	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCTTGCCGAGGCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	52222229	52226463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52222797_52222964_52223181_52223294_52223512_52223652_52223789_52226063
ENSMUSG00000086427.9_3	chr6	+	1822	5	FSM	ENSMUSG00000086427.9	ENSMUST00000134512.8	1839	5	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATACCAGAATAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	52222229	52226739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52222797_52222964_52223181_52223294_52223512_52223642_52223789_52226063
ENSMUSG00000086429.10_0	chr6	-	1159	2	FSM	ENSMUSG00000086429.10	ENSMUST00000124246.4	1181	2	11	11	-8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGTCAAACTGTGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	113054160	113047369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113048397_113054028
ENSMUSG00000086442.2_0	chr11	+	507	2	FSM	ENSMUSG00000086442.2	ENSMUST00000138702.2	534	2	6	21	6	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAGAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	107372747	107373912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_107373179_107373836
ENSMUSG00000086454.8_0	chr2	+	739	3	FSM	ENSMUSG00000086454.8	ENSMUST00000146553.8	770	3	23	8	2	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGCGAAGTGAACCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104389530	104398393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104389830_104390068_104390321_104398205
ENSMUSG00000086454.8_1	chr2	+	687	2	FSM	ENSMUSG00000086454.8	ENSMUST00000127237.2	707	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGGATACAGGCGAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	104389813	104398385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104390321_104398205
ENSMUSG00000086480.2_0	chr13	+	738	2	FSM	ENSMUSG00000086480.2	ENSMUST00000132564.2	751	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTGCACAATTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	111862058	111871653	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_111862190_111871046
ENSMUSG00000086503.5_0	chrX	-	17929	7	FSM	ENSMUSG00000086503.5	ENSMUST00000127786.4	17946	7	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	485	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACATCATGTGCTGTATA	NA	NA	NA	NA	NA	NA	NA	NA	102526852	102503980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_102511643_102512423_102512579_102512905_102513053_102513196_102513408_102514155_102514288_102514436_102514528_102517321
ENSMUSG00000086507.2_0	chr11	-	481	2	FSM	ENSMUSG00000086507.2	ENST00000442757.1	492	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2867	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGCTTCCCAGAAAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	80068537	80067910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_80068225_80068370
ENSMUSG00000086509.3_0	chr2	+	219	2	FSM	ENSMUSG00000086509.3	ENST00000655574.1	233	2	14	0	14	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCTCTGCAGTCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	147149516	147149872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_147149650_147149786
ENSMUSG00000086522.2_0	chr10	+	649	2	FSM	ENSMUSG00000086522.2	ENSMUST00000145987.2	657	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCGTTGCCAGATGCC	NA	NA	NA	NA	NA	NA	NA	NA	120735069	120737793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_120735322_120737396
ENSMUSG00000086537.8_0	chr2	-	2236	5	FSM	ENSMUSG00000086537.8	ENSMUST00000151472.8	2248	5	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTCATGAATTGAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	174137223	174123035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174124296_174125048_174125200_174126252_174126459_174127932_174128191_174136862
ENSMUSG00000086539.9_0	chr9	+	4247	4	FSM	ENSMUSG00000086539.9	ENSMUST00000191455.7	4272	4	23	2	23	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGATTCACAAACCTTA	NA	NA	NA	NA	NA	NA	NA	NA	63305905	63400815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_63306611_63384627_63384704_63387868_63388053_63397533
ENSMUSG00000086541.9_0	chr15	+	480	4	FSM	ENSMUSG00000086541.9	ENSMUST00000125401.8	485	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGGTAATTCTTTCCAGA	NA	NA	NA	NA	NA	NA	NA	NA	56553339	56557851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_56553449_56557009_56557165_56557350_56557474_56557758
ENSMUSG00000086541.9_1	chr15	+	631	3	FSM	ENSMUSG00000086541.9	ENSMUST00000163314.2	633	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGGGGAGGAGAGGATA	NA	NA	NA	NA	NA	NA	NA	NA	56557351	56641511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_56557474_56621757_56621879_56641123
ENSMUSG00000086541.9_2	chr15	+	614	3	FSM	ENSMUSG00000086541.9	ENSMUST00000165880.2	638	3	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAATCTGTGTCATCT	NA	NA	NA	NA	NA	NA	NA	NA	56628874	56641469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_56628993_56629676_56629827_56641123
ENSMUSG00000086583.4_0	chr7	-	1012	1	FSM	ENSMUSG00000086583.4	ENSMUST00000071641.5	1019	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	2140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCAAGCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	114305470	114304458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_114304500_114305500
ENSMUSG00000086596.3_0	chr9	+	4054	5	FSM	ENSMUSG00000086596.3	ENSMUST00000135338.3	4083	5	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTTGATAAATGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	113886230	113927790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_113886713_113893023_113893202_113897824_113897944_113911488_113911678_113924704
ENSMUSG00000086598.10_0	chr2	+	2424	3	FSM	ENSMUSG00000086598.10	ENST00000436147.3	2446	3	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	665	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACAAAACTATGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	84491720	84498730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_84491945_84496487_84498050_84498092
ENSMUSG00000086607.8_0	chr18	-	2613	2	FSM	ENSMUSG00000086607.8	ENSMUST00000137603.2	2651	2	29	9	29	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATAATTTTTCTATTGC	NA	NA	NA	NA	NA	NA	NA	NA	57685438	57679094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_57681448_57685178
ENSMUSG00000086629.9_0	chrX	+	846	4	FSM	ENSMUSG00000086629.9	ENSMUST00000152089.2	852	4	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATAGTATTTTCTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	107878286	107918372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_107878380_107879834_107879962_107915077_107915205_107917873
ENSMUSG00000086629.9_1	chrX	+	1098	3	FSM	ENSMUSG00000086629.9	ENSMUST00000151166.2	1107	3	5	4	5	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTAAAAAAAAACAACTGT	NA	NA	NA	NA	NA	NA	NA	NA	107878305	107918576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_107878611_107879871_107879962_107917873
ENSMUSG00000086629.9_3	chrX	+	1652	3	FSM	ENSMUSG00000086629.9	ENSMUST00000124329.2	1660	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGCGACTAGAAGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	107946991	108018504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_107947960_108015726_108015777_108017870
ENSMUSG00000086638.8_0	chr2	-	988	4	FSM	ENSMUSG00000086638.8	ENSMUST00000139042.8	994	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGTCTCGAGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	156562829	156556465	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156556970_156558014_156558166_156558804_156558934_156562625
ENSMUSG00000086644.2_0	chr2	-	421	3	FSM	ENSMUSG00000086644.2	ENSMUST00000123911.2	421	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTTGGCCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46332722	46309546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_46309822_46312642_46312728_46332661
ENSMUSG00000086644.2_1	chr2	-	360	2	ISM	ENSMUSG00000086644.2	ENSMUST00000123911.2	421	3	19995	0	19995	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGTGTTGGCCTGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	46312727	46309546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_46309822_46312642
ENSMUSG00000086657.3_0	chr2	-	770	2	FSM	ENSMUSG00000086657.3	ENSMUST00000152524.2	801	2	27	4	27	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGATTAAAATGGCATATTA	NA	NA	NA	NA	NA	NA	NA	NA	14078718	14075146	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_14075592_14078393
ENSMUSG00000086662.8_0	chr7	+	3638	8	FSM	ENSMUSG00000086662.8	ENSMUST00000154632.2	3653	8	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAATAATACTA	NA	NA	NA	NA	NA	NA	NA	NA	65231817	65268617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_65231964_65257892_65258071_65259089_65259321_65259477_65259735_65260044_65260153_65260501_65260650_65260919_65261001_65266128
ENSMUSG00000086682.2_0	chr4	-	2450	3	FSM	ENSMUSG00000086682.2	ENSMUST00000137752.2	2490	3	36	4	36	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCATTCTCTCTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	155709176	155692760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_155694749_155694870_155694972_155708815
ENSMUSG00000086693.2_0	chr13	-	1777	5	FSM	ENSMUSG00000086693.2	ENSMUST00000153685.2	1804	5	20	7	20	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACATGACTCATAAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	41154607	41109896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41111126_41111736_41111836_41112460_41112623_41113403_41113625_41154541
ENSMUSG00000086697.3_0	chr5	-	215	2	NNC	ENSMUSG00000118636.2	novel	239	2	NA	NA	14	-12	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATGAAGGGTAAGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	24028562	24028296	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr5_-_24028371_24028421
ENSMUSG00000086725.2_0	chr11	-	2195	2	FSM	ENSMUSG00000086725.2	ENSMUST00000129876.2	2203	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCTATAAGGTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	29123558	29120916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_29122952_29123398
ENSMUSG00000086728.3_0	chr9	-	1891	4	FSM	ENSMUSG00000086728.3	ENSMUST00000125333.3	1910	4	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGAAGTTTTTGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	57038558	57007236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57008233_57012876_57012984_57022921_57022984_57037832
ENSMUSG00000086740.2_0	chr4	+	2880	3	FSM	ENSMUSG00000086740.2	ENSMUST00000146124.2	2899	3	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAATAAAAAGAAAAATCA	NA	NA	NA	NA	NA	NA	NA	NA	149044782	149069109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_149044880_149056479_149056657_149066503
ENSMUSG00000086742.9_0	chr7	+	2324	5	FSM	ENSMUSG00000086742.9	ENSMUST00000139218.2	2330	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGAATAGTGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	139530352	139558884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_139530391_139542712_139542800_139555217_139555324_139556403_139556522_139556909
ENSMUSG00000086742.9_1	chr7	+	2279	4	ISM	ENSMUSG00000086742.9	ENSMUST00000139218.2	2330	5	12367	6	12367	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGAATAGTGTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	139542719	139558884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_139542800_139555217_139555324_139556403_139556522_139556909
ENSMUSG00000086758.2_0	chr2	-	1834	3	FSM	ENSMUSG00000086758.2	ENSMUST00000156541.2	1860	3	22	4	22	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTATTTTTTTTTGTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	108121642	108014064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_108015690_108119924_108120065_108121573
ENSMUSG00000086841.2_0	chr11	+	442	5	FSM	ENSMUSG00000086841.2	ENSMUST00000131787.2	462	5	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2278	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAACCAGATTGCCAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	62493714	62495625	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_62493850_62494060_62494109_62494422_62494473_62495228_62495293_62495480
ENSMUSG00000086859.5_0	chr11	+	1064	3	FSM	ENSMUSG00000086859.5	ENSMUST00000233355.2	1090	3	22	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCACTCTGTTTCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	116967635	116969775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116968029_116968668_116969166_116969601
ENSMUSG00000086859.5_1	chr11	+	2134	1	FSM	ENSMUSG00000086859.5	ENSMUST00000182811.2	2153	1	14	5	14	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCACTCTGTTTCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	116967641	116969775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116967600_116969800
ENSMUSG00000086877.8_0	chrX	+	1137	6	FSM	ENSMUSG00000086877.8	ENSMUST00000123462.8	1144	6	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTAAATCTTTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	20827922	20852955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_20827952_20828088_20828218_20828775_20828897_20833967_20834048_20851664_20851705_20852217
ENSMUSG00000086877.8_2	chrX	+	1108	5	ISM	ENSMUSG00000086877.8	ENSMUST00000123462.8	1144	6	173	0	173	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTTTTATTGTACATCA	NA	NA	NA	NA	NA	NA	NA	NA	20828095	20852962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_20828218_20828775_20828897_20833967_20834048_20851664_20851705_20852217
ENSMUSG00000086881.2_0	chr2	+	467	2	FSM	ENSMUSG00000086881.2	ENSMUST00000137582.2	476	2	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACAGTGCTTGCTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	65069100	65070011	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_65069406_65069849
ENSMUSG00000086903.5_0	chr15	-	2001	2	FSM	ENSMUSG00000086903.5	ENSMUST00000151949.5	2006	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTAAAGGCTTTGGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	102856165	102852501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102854267_102855929
ENSMUSG00000086914.2_0	chr9	+	504	2	FSM	ENSMUSG00000086914.2	ENSMUST00000146938.2	516	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGAGAAATGGGGTTCAA	NA	NA	NA	NA	NA	NA	NA	NA	53578550	53592558	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_53578656_53592159
ENSMUSG00000086914.2_1	chr9	+	394	1	NIC	ENSMUSG00000086914.2	novel	516	2	NA	NA	13612	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTCCACAAGAGAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	53592157	53592551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_53592200_53592600
ENSMUSG00000086922.3_0	chr6	-	820	1	FSM	ENSMUSG00000086922.3	ENSMUST00000118459.2	685	1	-31	-104	-31	104	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAACATTGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31119629	31118809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_31118800_31119600
ENSMUSG00000086952.2_0	chr4	+	668	3	FSM	ENSMUSG00000086952.2	ENSMUST00000124589.2	673	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTTCCCCAAAATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	59260050	59263264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59260082_59260584_59260725_59262767
ENSMUSG00000086952.2_1	chr4	+	629	2	ISM	ENSMUSG00000086952.2	ENSMUST00000124589.2	673	3	542	5	542	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTTCCCCAAAATTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	59260592	59263264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_59260725_59262767
ENSMUSG00000086962.5_0	chr11	-	1112	9	FSM	ENSMUSG00000086962.5	ENSMUST00000219877.2	1160	9	37	11	37	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGCAGACAGCCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	57983923	57954617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_57954803_57956421_57956589_57956871_57956978_57957381_57957588_57961174_57961297_57963291_57963396_57963668_57963770_57971750_57971774_57983825
ENSMUSG00000086965.2_0	chr16	+	850	3	FSM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTATTCAAAACAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	18317650	18320393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18317702_18317795_18317891_18319689
ENSMUSG00000086965.2_1	chr16	+	809	2	ISM	ENSMUSG00000086965.2	ENSMUST00000146673.2	865	3	144	6	144	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTTTGTTGAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	18317794	18320402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_18317891_18319689
ENSMUSG00000086968.9_0	chr3	-	5399	3	FSM	ENSMUSG00000086968.9	ENSMUST00000131345.8	5407	3	2	6	2	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATCTCCTGTGTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	107803527	107796171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107800824_107801366_107801545_107802958
ENSMUSG00000086968.9_2	chr3	-	2338	3	FSM	ENSMUSG00000086968.9	ENSMUST00000152663.8	2358	3	16	4	-8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTTTGTCACCTAA	NA	NA	NA	NA	NA	NA	NA	NA	107803098	107798790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107800824_107801366_107801532_107802958
ENSMUSG00000086968.9_4	chr3	-	1622	3	FSM	ENSMUSG00000086968.9	ENSMUST00000146337.3	1636	3	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGATTGGGACTAAAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	107802997	107800182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_107800824_107801366_107802309_107802958
ENSMUSG00000086968.9_5	chr3	-	1543	2	ISM	ENSMUSG00000086968.9	ENSMUST00000146337.3	1636	3	734	9	734	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCAGGATTGGGACTAA	NA	NA	NA	NA	NA	NA	NA	NA	107802274	107800188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_107800824_107801366
ENSMUSG00000086995.2_0	chr2	+	2932	4	FSM	ENSMUSG00000086995.2	ENSMUST00000131189.2	2940	4	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGACCGGATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58166791	58176907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_58166875_58169565_58169777_58171149_58171312_58174431
ENSMUSG00000086995.2_1	chr2	+	2852	3	ISM	ENSMUSG00000086995.2	ENSMUST00000131189.2	2940	4	2772	7	2772	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGACCGGATTGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	58169562	58176907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_58169777_58171149_58171312_58174431
ENSMUSG00000087004.2_0	chr2	-	569	4	FSM	ENSMUSG00000087004.2	ENSMUST00000142642.2	579	4	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTGTCCATGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	151792557	151789198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_151789343_151790793_151790959_151791055_151791262_151792503
ENSMUSG00000087004.2_1	chr2	-	517	3	ISM	ENSMUSG00000087004.2	ENSMUST00000142642.2	579	4	1298	6	1298	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATGTGTCCATGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	151791263	151789198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_151789343_151790793_151790959_151791055
ENSMUSG00000087008.5_0	chr1	-	947	1	FSM	ENSMUSG00000087008.5	ENSMUST00000117185.2	985	1	31	7	31	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAGTAGCTCCCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	81720653	81719706	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_81719700_81720700
ENSMUSG00000087010.2_0	chr4	+	271	2	FSM	ENSMUSG00000087010.2	ENSMUST00000130055.2	306	2	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCAAGGGGGTGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	125122418	125135839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_125122634_125135783
ENSMUSG00000087028.8_0	chr2	-	2612	3	FSM	ENSMUSG00000087028.8	ENSMUST00000131147.2	2646	3	30	4	30	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAGAGATTTCCTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	25035378	25031812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25033946_25034051_25034143_25034990
ENSMUSG00000087050.2_0	chr11	-	2411	2	FSM	ENSMUSG00000087050.2	ENSMUST00000150471.2	2429	2	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCACAAAATAGAACAAGT	NA	NA	NA	NA	NA	NA	NA	NA	77923477	77920841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_77922758_77922982
ENSMUSG00000087060.8_1	chr11	-	1517	3	FSM	ENSMUSG00000087060.8	ENSMUST00000130392.8	1540	3	18	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGAAGGTGTATCGTT	NA	NA	NA	NA	NA	NA	NA	NA	16901081	16885158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16886565_16900881_16900931_16901019
ENSMUSG00000087060.8_2	chr11	-	591	6	FSM	ENSMUSG00000087060.8	ENSMUST00000139271.2	600	6	3	6	3	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGATTGTGAACAGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	16901079	16885707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_16885927_16886454_16886565_16887372_16887485_16888584_16888626_16900881_16900931_16901019
ENSMUSG00000087088.3_0	chr7	-	8465	2	FSM	ENSMUSG00000087088.3	ENSMUST00000208892.2	8508	2	34	9	-4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGGGCTCACATGGG	NA	NA	NA	NA	NA	NA	NA	NA	83281054	83267698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_83275083_83279973
ENSMUSG00000087109.2_1	chr12	-	2347	4	NNC	ENSMUSG00000087109.2	novel	1590	2	NA	NA	2668	6891	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCAATGTTGGACAGT	NA	NA	NA	NA	NA	NA	NA	NA	71365766	71357503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_71357740_71359459_71359591_71360556_71360709_71363938
ENSMUSG00000087120.2_0	chr11	-	294	2	FSM	ENSMUSG00000087120.2	ENSMUST00000142533.2	294	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCCAGCAATTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	62441867	62440872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_62440986_62441686
ENSMUSG00000087132.9_0	chr19	+	1389	5	FSM	ENSMUSG00000087132.9	ENSMUST00000154407.8	1402	5	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAACCTTCAAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	4489030	4498341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4489418_4493769_4493817_4494030_4494067_4497324_4497455_4497552
ENSMUSG00000087132.9_1	chr19	+	1559	3	FSM	ENSMUSG00000087132.9	ENSMUST00000235289.2	1563	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATATAAGTGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4489350	4498997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4489418_4493769_4493817_4497552
ENSMUSG00000087132.9_2	chr19	+	1480	2	ISM	ENSMUSG00000087132.9	ENSMUST00000235289.2	1563	3	4431	4	4431	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTATATAAGTGTTTGCC	NA	NA	NA	NA	NA	NA	NA	NA	4493781	4498997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_4493817_4497552
ENSMUSG00000087143.10_0	chr13	+	2198	3	FSM	ENSMUSG00000087143.10	ENSMUST00000123998.2	2203	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGGTGGTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78350492	78384678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_78350597_78379336_78379533_78382780
ENSMUSG00000087143.10_1	chr13	+	4163	2	FSM	ENSMUSG00000087143.10	ENSMUST00000183171.2	4176	2	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCATTCAGTGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	78350914	78427506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_78350978_78423406
ENSMUSG00000087143.10_2	chr13	+	2096	2	ISM	ENSMUSG00000087143.10	ENSMUST00000123998.2	2203	3	28842	5	28429	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAACTGGTGGTCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78379334	78384678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_78379533_78382780
ENSMUSG00000087143.10_3	chr13	+	4097	1	ISM	ENSMUSG00000087143.10	ENSMUST00000183171.2	4176	2	72501	7	72501	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGATCATTCAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	78423406	78427503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_78423400_78427500
ENSMUSG00000087163.2_0	chr10	-	419	3	ISM	ENSMUSG00000087163.2	ENSMUST00000155550.2	521	4	1763	27	1763	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATCTTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	127510830	127507499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_127507734_127508418_127508499_127510725
ENSMUSG00000087163.2_1	chr10	-	498	4	FSM	ENSMUSG00000087163.2	ENSMUST00000155550.2	521	4	0	23	0	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATCTTTAAAAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	127512593	127507495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_127507734_127508418_127508499_127510725_127510852_127512539
ENSMUSG00000087165.8_0	chr11	-	683	4	FSM	ENSMUSG00000087165.8	ENSMUST00000152790.8	714	4	31	0	31	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTTGTCTCAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	57692212	57686324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_57686621_57686851_57687000_57687137_57687224_57692059
ENSMUSG00000087168.2_0	chr16	+	4794	2	FSM	ENSMUSG00000087168.2	ENSMUST00000140000.2	4814	2	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGTGACTGGAGCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	5072663	5107479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_5073876_5103897
ENSMUSG00000087172.2_0	chr11	+	2467	7	FSM	ENSMUSG00000087172.2	ENSMUST00000148504.2	2509	7	31	11	31	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTACAAATCTGAGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	43849946	44025803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_43850154_43894855_43895057_43895823_43896018_43917343_43917432_43917986_43918196_44015029_44015146_44024351
ENSMUSG00000087174.8_0	chrX	-	3150	6	FSM	ENSMUSG00000087174.8	ENSMUST00000127533.8	3164	6	10	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTCTTCCTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	104113692	104080806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104083419_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_1	chrX	-	3064	5	ISM	ENSMUSG00000087174.8	ENSMUST00000127533.8	3164	6	420	4	359	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTCTTCCTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	104113282	104080806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_104083419_104091514_104091617_104110364_104110484_104112069_104112235_104113216
ENSMUSG00000087174.8_10	chrX	-	699	6	FSM	ENSMUSG00000087174.8	ENSMUST00000144366.8	709	6	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGTTAAAACAGTTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	104113661	104087418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104087718_104091514_104091617_104110364_104110484_104112176_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_2	chrX	-	1682	7	FSM	ENSMUSG00000087174.8	ENSMUST00000156974.8	1691	7	0	9	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATGACCTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	104113652	104082422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104083419_104086730_104086911_104087607_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_4	chrX	-	1880	8	FSM	ENSMUSG00000087174.8	ENSMUST00000154334.8	1887	8	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTTTATAAAATATGACC	NA	NA	NA	NA	NA	NA	NA	NA	104113648	104082429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104083419_104086209_104086424_104086735_104086911_104087607_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_6	chrX	-	3712	5	FSM	ENSMUSG00000087174.8	ENSMUST00000138460.8	3732	5	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCAAAAAAAATTTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	104113724	104084473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104087718_104110364_104110484_104112069_104112235_104113216_104113282_104113605
ENSMUSG00000087174.8_7	chrX	-	997	8	FSM	ENSMUSG00000087174.8	ENSMUST00000135114.8	1007	8	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATGGAACAGCAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	104113693	104086274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_104086424_104086735_104086911_104087607_104087718_104091514_104091617_104110364_104110484_104112069_104112235_104113216_104113306_104113605
ENSMUSG00000087177.8_0	chr10	-	809	4	FSM	ENSMUSG00000087177.8	ENSMUST00000145971.2	830	4	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAAATCCAGTGGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	39607969	39515574	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_39515763_39516375_39516508_39521551_39521805_39607733
ENSMUSG00000087179.9_0	chr2	-	871	4	FSM	ENSMUSG00000087179.9	ENSMUST00000137463.8	874	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGGAGGGGGACACTGT	NA	NA	NA	NA	NA	NA	NA	NA	156681737	156674968	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156675347_156679742_156679834_156680337_156680457_156681454
ENSMUSG00000087187.2_0	chr2	+	476	4	FSM	ENSMUSG00000087187.2	ENSMUST00000122948.2	476	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGGCAGCTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36106836	36112946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36106866_36107203_36107287_36110572_36110744_36112753
ENSMUSG00000087187.2_1	chr2	+	440	3	ISM	ENSMUSG00000087187.2	ENSMUST00000122948.2	476	4	374	0	374	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTGGCAGCTGCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	36107210	36112946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_36107287_36110572_36110744_36112753
ENSMUSG00000087203.8_0	chr2	-	2538	3	FSM	ENSMUSG00000087203.8	ENSMUST00000138764.2	2562	3	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAAAGAAGGCGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	117941548	117900327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_117902324_117932794_117932966_117941177
ENSMUSG00000087213.3_0	chr1	-	689	2	FSM	ENSMUSG00000087213.3	ENSMUST00000150749.2	711	2	13	9	13	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAAAGTGAAACAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	64729805	64719038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_64719545_64729622
ENSMUSG00000087230.11_0	chr1	-	2049	16	FSM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGGATCAAAAGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	136136050	136109550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_136109643_136113196_136113350_136113684_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678_136128787_136134654_136134742_136135490_136135617_136135985
ENSMUSG00000087230.11_1	chr1	-	1975	15	ISM	ENSMUSG00000087230.11	ENST00000435735.2	2058	16	446	6	446	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGGATCAAAAGGAGATA	NA	NA	NA	NA	NA	NA	NA	NA	136135607	136109550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_136109643_136113196_136113350_136113684_136113862_136114398_136114540_136118436_136118552_136118645_136118830_136119296_136119423_136119840_136119989_136124005_136124161_136125835_136125986_136127260_136127343_136128076_136128217_136128678_136128787_136134654_136134742_136135490
ENSMUSG00000087231.8_0	chr6	+	1757	7	FSM	ENSMUSG00000087231.8	ENSMUST00000130657.8	1764	7	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCTATATTGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	67013582	67057631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_67013920_67040378_67040519_67041596_67041703_67043812_67043933_67054231_67054350_67055210_67055402_67056886
ENSMUSG00000087247.4_1	chr1	+	341	4	FSM	ENSMUSG00000087247.4	ENST00000523939.1	358	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATCATATTTAATATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6429576	6464537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_6429739_6458796_6458851_6459663_6459745_6464493
ENSMUSG00000087247.4_2	chr1	+	872	5	FSM	ENSMUSG00000087247.4	ENST00000358543.9	884	5	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAGTAAAATAATACTA	NA	NA	NA	NA	NA	NA	NA	NA	6429572	6464992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_6429739_6458796_6458851_6459663_6459745_6461263_6461336_6464493
ENSMUSG00000087259.8_0	chr11	-	1832	3	FSM	ENSMUSG00000087259.8	ENSMUST00000127263.8	1861	3	29	0	29	0	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTTGTCTTTTCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	113092635	112934720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_112935987_112958167_112958213_113092114
ENSMUSG00000087260.6_0	chr3	+	817	4	FSM	ENSMUSG00000087260.6	ENSMUST00000145735.6	881	4	61	3	61	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGTTTGGTTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	107186234	107191392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_107186430_107187185_107187248_107189224_107189343_107190950
ENSMUSG00000087269.2_0	chr2	-	896	2	FSM	ENSMUSG00000087269.2	ENSMUST00000133550.2	920	2	20	4	20	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATTAAAAAAAAAAAATCGC	NA	NA	NA	NA	NA	NA	NA	NA	31042283	31040656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_31041263_31041993
ENSMUSG00000087289.3_0	chr4	+	1936	2	FSM	ENSMUSG00000087289.3	ENSMUST00000132609.2	1944	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTGCATTGGGATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	107645045	107647110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_107646203_107646331
ENSMUSG00000087299.2_3	chr4	+	737	2	FSM	ENSMUSG00000087299.2	ENSMUST00000138426.2	751	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAAATGCAGCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	116408942	116409816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_116409545_116409681
ENSMUSG00000087305.9_0	chr6	-	1893	2	FSM	ENSMUSG00000087305.9	ENSMUST00000144568.3	1913	2	13	7	13	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCCTGTTAGTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	8509125	8507065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8508812_8508978
ENSMUSG00000087331.9_0	chr15	-	519	3	FSM	ENSMUSG00000087331.9	ENSMUST00000162579.8	544	3	23	2	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCATGGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88958477	88955400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88955540_88955773_88955952_88958275
ENSMUSG00000087331.9_1	chr15	-	624	4	FSM	ENSMUSG00000087331.9	ENSMUST00000150364.3	652	4	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGTCATGGTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	88960027	88955400	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_88955540_88955773_88955922_88958275_88958402_88959816
ENSMUSG00000087333.2_0	chr2	-	3387	3	FSM	ENSMUSG00000087333.2	ENSMUST00000143898.2	3412	3	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAACATAGTTGAGCAAGT	NA	NA	NA	NA	NA	NA	NA	NA	74968123	74955220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_74958061_74963805_74964058_74967828
ENSMUSG00000087352.2_0	chr4	+	475	2	FSM	ENSMUSG00000087352.2	ENSMUST00000124471.2	485	2	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCTTCTCTCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	132260007	132260912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132260219_132260648
ENSMUSG00000087364.2_0	chr2	+	2831	2	FSM	ENSMUSG00000087364.2	ENSMUST00000149378.2	2837	2	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTATCCGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26927298	26930861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_26927360_26928091
ENSMUSG00000087364.2_1	chr2	+	2772	1	NIC	ENSMUSG00000087364.2	novel	2837	2	NA	NA	793	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCATTTATCCGTGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	26928089	26930861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_26928100_26930900
ENSMUSG00000087365.8_0	chrX	-	771	4	FSM	ENSMUSG00000087365.8	ENSMUST00000155622.8	773	4	2	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGTGTCCATTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	52146065	52143922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52144368_52145018_52145042_52145534_52145647_52145874
ENSMUSG00000087365.8_1	chrX	-	847	4	FSM	ENSMUSG00000087365.8	ENSMUST00000129764.8	868	4	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATTTTAAATGAGAATAC	NA	NA	NA	NA	NA	NA	NA	NA	52146024	52144091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52144368_52144732_52145042_52145534_52145647_52145874
ENSMUSG00000087365.8_3	chrX	-	694	3	FSM	ENSMUSG00000087365.8	ENSMUST00000152109.2	698	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGGGAAGAAAAGAAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	52146065	52144650	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_52145042_52145534_52145647_52145874
ENSMUSG00000087366.8_0	chr4	+	621	4	FSM	ENSMUSG00000087366.8	ENSMUST00000133772.2	635	4	2	12	2	-12	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAGCAACAAATATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	94964054	95026010	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94964108_94981830_94981971_95021866_95021936_95025651
ENSMUSG00000087366.8_1	chr4	+	552	3	ISM	ENSMUSG00000087366.8	ENSMUST00000133772.2	635	4	17796	10	102	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGCAACAAATATTTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	94981848	95026012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_94981971_95021866_95021936_95025651
ENSMUSG00000087367.2_0	chr19	+	741	2	FSM	ENSMUSG00000087367.2	ENSMUST00000133963.2	751	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTAAGTAAGTGTATCA	NA	NA	NA	NA	NA	NA	NA	NA	45737948	45740741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45738117_45740168
ENSMUSG00000087368.8_0	chrX	+	3191	10	FSM	ENSMUSG00000087368.8	ENSMUST00000134066.8	3201	10	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAATAAAAATGAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	135643731	135704101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_135645458_135648071_135648198_135657242_135657370_135658849_135658946_135659308_135659508_135660604_135660668_135661166_135661325_135662739_135662838_135689269_135689367_135703600
ENSMUSG00000087370.4_0	chr13	+	7156	3	FSM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATACAGTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	41759695	41794823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41759789_41781453_41781625_41787931
ENSMUSG00000087370.4_1	chr13	+	7063	2	ISM	ENSMUSG00000087370.4	ENSMUST00000129449.3	7168	3	21762	8	21762	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTATACAGTGCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	41781453	41794823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_41781625_41787931
ENSMUSG00000087371.2_0	chr7	-	2706	4	FSM	ENSMUSG00000087371.2	ENSMUST00000147449.2	2713	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCATCTCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27207546	27202148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27204506_27204696_27204878_27205419_27205540_27207498
ENSMUSG00000087371.2_1	chr7	-	2659	3	ISM	ENSMUSG00000087371.2	ENSMUST00000147449.2	2713	4	2007	6	2007	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCATCTCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27205540	27202148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_27204506_27204696_27204878_27205419
ENSMUSG00000087377.2_0	chr2	+	915	2	FSM	ENSMUSG00000087377.2	ENSMUST00000124336.2	921	2	5	1	5	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATTATTTTTAAAGATAA	NA	NA	NA	NA	NA	NA	NA	NA	132095281	132103252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_132095450_132102505
ENSMUSG00000087381.9_0	chr4	-	808	4	FSM	ENSMUSG00000087381.9	ENSMUST00000126009.2	810	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGGGCTTCAGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	156116079	156110755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156111344_156112931_156113012_156114878_156114974_156116034
ENSMUSG00000087381.9_1	chr4	-	738	3	ISM	ENSMUSG00000087381.9	ENSMUST00000126009.2	810	4	1126	7	1126	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTCAGACTGGGCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	156114953	156110760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_-_156111344_156112931_156113012_156114878
ENSMUSG00000087396.8_0	chrX	-	4201	10	NIC	ENSMUSG00000087396.8	novel	4364	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTAAGGAAAAGAACAC	NA	NA	NA	NA	NA	NA	NA	NA	74808305	74750537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_74752066_74752849_74754310_74771063_74771125_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74803837_74804001_74808131
ENSMUSG00000087396.8_1	chrX	-	4354	11	FSM	ENSMUSG00000087396.8	ENSMUST00000138943.8	4364	11	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTCCCAAAATTAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	74808301	74750543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74752066_74752849_74754310_74771063_74771125_74774625_74774789_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74803837_74804001_74808131
ENSMUSG00000087396.8_2	chrX	-	3354	9	FSM	ENSMUSG00000087396.8	ENSMUST00000130744.8	3369	9	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGGAACCCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	74808299	74769079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74771125_74774625_74774789_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74803837_74804001_74808131
ENSMUSG00000087396.8_3	chrX	-	3179	8	NIC	ENSMUSG00000087396.8	novel	3369	9	NA	NA	25	-2	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACCCATTTCTGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	74808280	74769072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_74771125_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74803837_74804001_74808131
ENSMUSG00000087396.8_4	chrX	-	3106	8	NIC	ENSMUSG00000087396.8	novel	3369	9	NA	NA	100	0	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCCATTTCTGGCTCACT	NA	NA	NA	NA	NA	NA	NA	NA	74808205	74769070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chrX_-_74771125_74774625_74774789_74779698_74779862_74785421_74785585_74790282_74790446_74795130_74795294_74798971_74799135_74808131
ENSMUSG00000087399.2_0	chr4	+	705	2	FSM	ENSMUSG00000087399.2	ENSMUST00000142373.2	745	2	19	21	19	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAGAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24792698	24800289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_24792900_24799785
ENSMUSG00000087403.10_0	chrX	-	4116	2	ISM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	259	7	259	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGAATGACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	151110232	151077830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_-_151081871_151110156
ENSMUSG00000087403.10_1	chrX	-	4194	3	FSM	ENSMUSG00000087403.10	ENSMUST00000195280.3	4212	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTGAATGACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	151110480	151077830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_151081871_151110156_151110236_151110405
ENSMUSG00000087408.11_0	chr8	+	2711	8	FSM	ENSMUSG00000087408.11	ENSMUST00000140239.4	2711	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCGTTGGCGCAGGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	70768436	70784237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70768759_70770840_70771001_70774153_70774335_70775177_70775340_70775751_70775900_70776010_70776121_70782187_70782927_70783348
ENSMUSG00000087412.5_0	chr7	-	605	1	FSM	ENSMUSG00000087412.5	ENSMUST00000140687.2	625	1	10	10	10	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	172	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGCAAATGAGCCTCATG	NA	NA	NA	NA	NA	NA	NA	NA	92828842	92828237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92828200_92828800
ENSMUSG00000087412.5_1	chr7	-	841	2	FSM	ENSMUSG00000087412.5	ENSMUST00000133910.3	849	2	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TATAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92833375	92828189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_92828866_92833210
ENSMUSG00000087424.2_0	chrX	+	846	3	FSM	ENSMUSG00000087424.2	ENSMUST00000130099.2	853	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTAAGCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12908289	12911529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_12908349_12909795_12909896_12910842
ENSMUSG00000087424.2_1	chrX	+	785	2	ISM	ENSMUSG00000087424.2	ENSMUST00000130099.2	853	3	1508	7	1508	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTATTAAGCATTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	12909797	12911529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_12909896_12910842
ENSMUSG00000087440.3_0	chr3	+	1613	1	FSM	ENSMUSG00000087440.3	ENSMUST00000139771.3	1625	1	2	10	2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATCTGTAATGGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	51184181	51185794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_51184200_51185800
ENSMUSG00000087473.8_0	chr2	+	1387	3	FSM	ENSMUSG00000087473.8	ENSMUST00000150450.2	1404	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACACCCCATTAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104087026	104106095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_104087279_104088541_104089022_104105440
ENSMUSG00000087479.2_0	chr14	+	2759	7	FSM	ENSMUSG00000087479.2	ENSMUST00000140488.2	2809	7	24	26	24	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAATAAAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	119336400	119352460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_119337488_119337699_119337927_119338443_119338577_119343557_119343727_119347030_119347805_119351295_119351459_119352254
ENSMUSG00000087496.2_0	chr2	-	460	2	FSM	ENSMUSG00000087496.2	ENSMUST00000151820.2	488	2	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCCTCTTGGCTTAA	NA	NA	NA	NA	NA	NA	NA	NA	32765989	32763770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_32763993_32765751
ENSMUSG00000087507.2_2	chr11	+	760	2	FSM	ENSMUSG00000087507.2	ENSMUST00000152073.2	790	2	25	5	25	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTCCAGGAGTCTCGAG	NA	NA	NA	NA	NA	NA	NA	NA	18963841	18965149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_18963998_18964545
ENSMUSG00000087537.2_1	chr2	+	823	4	FSM	ENSMUSG00000087537.2	ENSMUST00000138883.2	838	4	2	13	2	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAATTCATTAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95668434	95670926	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_95668557_95669804_95669860_95670092_95670320_95670507
ENSMUSG00000087574.2_0	chr11	+	3211	2	FSM	ENSMUSG00000087574.2	ENSMUST00000138007.2	3220	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAACAACAAAAATATG	NA	NA	NA	NA	NA	NA	NA	NA	88609479	88613426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_88609844_88610579
ENSMUSG00000087575.8_0	chr4	+	376	2	FSM	ENSMUSG00000087575.8	ENSMUST00000153817.8	412	2	8	28	8	-28	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAATAAATAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	129155765	129158775	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129155906_129158539
ENSMUSG00000087575.8_1	chr4	+	434	2	FSM	ENSMUSG00000087575.8	ENSMUST00000150171.2	459	2	1	24	1	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAAATATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	129157523	129158779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_129157718_129158539
ENSMUSG00000087590.3_0	chr18	+	420	3	FSM	ENSMUSG00000087590.3	ENSMUST00000146010.3	430	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACACGTGTATGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33927954	33929039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_33928178_33928435_33928499_33928905
ENSMUSG00000087591.8_0	chrX	-	1397	4	FSM	ENSMUSG00000087591.8	ENSMUST00000146535.8	1409	4	9	3	9	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATTTACTTCTTTTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	12221226	12206023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_12207101_12208406_12208544_12209501_12209578_12221119
ENSMUSG00000087598.10_0	chr7	-	6379	4	FSM	ENSMUSG00000087598.10	ENSMUST00000086006.12	6402	4	14	9	14	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAAGTCACTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	23907560	23893380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_23899468_23902794_23902922_23906482_23906541_23907453
ENSMUSG00000087626.2_0	chr6	+	542	2	FSM	ENSMUSG00000087626.2	ENSMUST00000133723.2	552	2	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAACCCTAAAAGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	52149864	52151033	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52149989_52150615
ENSMUSG00000087629.2_0	chr11	+	490	2	FSM	ENSMUSG00000087629.2	ENSMUST00000129126.2	503	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACACAGCTCAAGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	58016893	58019325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_58017245_58019186
ENSMUSG00000087639.2_1	chr14	-	1669	7	NNC	ENSMUSG00000087639.2	novel	2257	2	NA	NA	2700	67240	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCCCTGAAATGGAGAC	NA	NA	NA	NA	NA	NA	NA	NA	33089400	33020667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr14_-_33020746_33065182_33065357_33081068_33081280_33084396_33084530_33085229_33085307_33086349_33086470_33088524
ENSMUSG00000087639.2_28	chr14	-	2243	2	FSM	ENSMUSG00000087639.2	ENSMUST00000137359.2	2257	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTTATTTTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	33092092	33087913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_33089393_33091328
ENSMUSG00000087658.3_0	chr6	+	675	3	FSM	ENSMUSG00000087658.3	ENSMUST00000132559.2	713	3	34	4	34	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCACTCGTCCTAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	52135445	52139095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_52135667_52138218_52138488_52138910
ENSMUSG00000087662.3_0	chr13	-	2819	4	FSM	ENSMUSG00000087662.3	ENSMUST00000129791.3	2819	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTCAATGTGGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	31514750	31509916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_31510128_31510623_31513130_31513746_31513806_31514707
ENSMUSG00000087662.3_1	chr13	-	2770	3	ISM	ENSMUSG00000087662.3	ENSMUST00000129791.3	2819	4	951	0	951	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGTTCAATGTGGCAATC	NA	NA	NA	NA	NA	NA	NA	NA	31513799	31509916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_31510128_31510623_31513130_31513746
ENSMUSG00000087679.3_1	chr2	-	2465	2	FSM	ENSMUSG00000087679.3	ENSMUST00000133808.2	2483	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTGCTGATGGAGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	26030522	26026832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_26028926_26030150
ENSMUSG00000087687.4_0	chr8	+	1184	4	FSM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAGCCCTACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3671551	3674227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_3671612_3672341_3672429_3672592_3672626_3673223
ENSMUSG00000087687.4_4	chr8	+	1123	3	ISM	ENSMUSG00000087687.4	ENSMUST00000156380.4	1193	4	792	8	741	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGAAGCCCTACTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	3672342	3674227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_3672429_3672592_3672626_3673223
ENSMUSG00000087938.4_0	chr4	-	100	1	FSM	ENSMUSG00000087938.4	ENSMUST00000157313.4	108	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTTAAGAAAGTGGAT	NA	NA	NA	NA	NA	NA	NA	NA	41312198	41312098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_41312100_41312200
ENSMUSG00000089255.3_0	chr17	-	122	1	FSM	ENSMUSG00000089255.3	ENSMUST00000158630.3	128	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCCAGAGCGACTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	24938777	24938655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_24938700_24938800
ENSMUSG00000089678.9_0	chr15	+	1709	10	FSM	ENSMUSG00000089678.9	ENST00000618015.4	1732	10	12	11	12	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	2232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATTCATGGTGATGCT	NA	NA	NA	NA	NA	NA	NA	NA	10373779	10410219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10373955_10377460_10377585_10378883_10378979_10380688_10380783_10381419_10381514_10388272_10388374_10388875_10388969_10399099_10399250_10400532_10400632_10409535
ENSMUSG00000089682.11_0	chr14	+	3468	4	FSM	ENSMUSG00000089682.11	ENSMUST00000022806.10	3509	4	29	12	29	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAATGAGAAGTACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	55120862	55125679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55122840
ENSMUSG00000089687.3_0	chr4	-	714	2	FSM	ENSMUSG00000089687.3	ENSMUST00000040411.7	761	2	38	9	38	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGACAACAGACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	132030658	132029516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_132029994_132030421
ENSMUSG00000089704.10_0	chr8	+	4093	16	FSM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATAATCCTCCGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	124958141	125072453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124958389_125022096_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ENSMUSG00000089704.10_5	chr8	+	3849	15	ISM	ENSMUSG00000089704.10	ENSMUST00000034458.9	4113	16	63964	8	63964	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATAATCCTCCGCCGCT	NA	NA	NA	NA	NA	NA	NA	NA	125022093	125072453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_125022191_125032253_125032408_125050410_125050510_125050730_125050799_125051009_125051076_125054830_125054953_125056451_125056540_125058747_125058836_125059306_125059411_125061013_125061141_125063312_125063406_125064000_125064085_125065181_125065309_125067557_125067678_125070041
ENSMUSG00000089715.13_0	chr15	-	5787	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109627.8	5806	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTATATCCCAGCCCCCT	NA	NA	NA	NA	NA	NA	NA	NA	79718878	79708104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79713180_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUSG00000089715.13_2	chr15	-	3051	5	FSM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79718433	79710341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115_79718160_79718343
ENSMUSG00000089715.13_3	chr15	-	2958	4	ISM	ENSMUSG00000089715.13	ENSMUST00000109625.8	3056	5	277	5	266	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTGCAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	79718161	79710346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_79713126_79717712_79717780_79717902_79717969_79718115
ENSMUSG00000089739.3_0	chr2	-	1539	2	ISM	ENSMUSG00000078923.11	ENSMUST00000060645.13	1586	3	14006	3	14006	3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGCTCGGTGGTTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	167459886	167449766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_167451168_167459748
ENSMUSG00000089739.3_1	chr2	-	1742	3	ISM	ENSMUSG00000078923.11	ENST00000557021.5	1811	4	13960	0	13926	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGCTCGGTGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167459966	167449769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_167451168_167452223_167452350_167459748
ENSMUSG00000089739.3_2	chr2	-	2357	8	FSM	ENSMUSG00000089739.3	ENSMUST00000125544.3	2367	8	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGAGCTCGGTGGTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167503406	167449769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167451168_167452223_167452350_167459748_167459898_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ENSMUSG00000089756.3_0	chr2	-	824	4	NNC	ENSMUSG00000089756.3	novel	2939	4	NA	NA	10	559	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTGCCGAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	175722883	175710114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_175710649_175714514_175714576_175714781_175714909_175722781
ENSMUSG00000089756.3_2	chr2	-	733	3	ISM	ENSMUSG00000089756.3	ENSMUST00000108949.3	2939	4	-11	3370	-11	-2890	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTACATCTCTATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	175722855	175714043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_175714576_175714781_175714909_175722781
ENSMUSG00000089762.4_0	chr2	-	2661	1	FSM	ENSMUSG00000089762.4	ENSMUST00000065134.4	2683	1	15	7	15	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTAGAGTGTATGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	30364216	30361555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_30361600_30364200
ENSMUSG00000089774.3_0	chr16	+	10894	2	FSM	ENSMUSG00000089774.3	ENSMUST00000113975.3	10913	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTACACTTCTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	91855219	91884352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_91855369_91873607
ENSMUSG00000089803.4_0	chr1	-	1062	1	FSM	ENSMUSG00000089803.4	ENSMUST00000126220.3	628	1	-64	-370	-64	370	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTATCTAGACT	NA	NA	NA	NA	NA	NA	NA	NA	171972532	171971470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_171971500_171972500
ENSMUSG00000089812.3_0	chr1	+	524	2	FSM	ENSMUSG00000089812.3	ENST00000437764.5	543	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAACCATCGTCAGGACTA	NA	NA	NA	NA	NA	NA	NA	NA	192537139	192539249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192537387_192538972
ENSMUSG00000089812.3_2	chr1	+	378	2	FSM	ENSMUSG00000089812.3	ENSMUST00000159407.3	388	2	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGAGCTCAAGTCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	192537236	192538550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_192537387_192538322
ENSMUSG00000089824.11_0	chr2	-	6653	3	FSM	ENSMUSG00000089824.11	ENSMUST00000059647.12	6667	3	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTTAACTGCACAGTACT	NA	NA	NA	NA	NA	NA	NA	NA	155953868	155933883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155940293_155945268_155945350_155953705
ENSMUSG00000089824.11_1	chr2	-	6622	3	FSM	ENSMUSG00000089824.11	ENSMUST00000109604.9	6635	3	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTAACTGCACAGTACTT	NA	NA	NA	NA	NA	NA	NA	NA	155953868	155933882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155940293_155945268_155945318_155953705
ENSMUSG00000089827.2_0	chr13	-	1027	2	FSM	ENSMUSG00000089827.2	ENSMUST00000161006.2	1044	2	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGGACTGCAGCTTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	81033631	81032347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_81033014_81033270
ENSMUSG00000089832.9_1	chr7	-	2340	18	FSM	ENSMUSG00000089832.9	ENSMUST00000003857.7	2358	18	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACACTGTTTATAGTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	27055430	27041561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27041970_27042070_27042186_27042667_27042847_27044064_27044162_27044597_27044754_27046426_27046598_27047756_27047874_27047958_27048047_27049916_27050033_27051120_27051312_27051404_27051496_27052019_27052182_27053796_27053878_27054150_27054210_27054638_27054713_27054825_27054872_27054997_27055052_27055295
ENSMUSG00000089847.9_0	chr7	+	3262	3	FSM	ENSMUSG00000089847.9	ENSMUST00000106783.8	3273	3	6	5	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTGTCTGTGTTTCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	105289268	105292839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105289830_105289968_105290065_105290234
ENSMUSG00000089847.9_1	chr7	+	677	4	FSM	ENSMUSG00000089847.9	ENSMUST00000058333.10	694	4	7	10	7	8	multi-exon	FALSE	canonical	NA	NA	NA	NA	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTTAAACAAAGAAGTGC	NA	NA	NA	NA	NA	NA	NA	NA	105289661	105291040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105289830_105289968_105290065_105290234_105290436_105290828
ENSMUSG00000089847.9_2	chr7	+	507	4	FSM	ENSMUSG00000089847.9	ENSMUST00000210350.2	529	4	7	15	-6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAAACAAAGAAGTGCT	NA	NA	NA	NA	NA	NA	NA	NA	105289764	105291041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_105289830_105289968_105290065_105290234_105290368_105290828
ENSMUSG00000089862.9_0	chr6	+	2600	5	FSM	ENSMUSG00000089862.9	ENSMUST00000159335.8	2615	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGACCCTTGGTGTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	8259296	8459464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970_8427186_8457447
ENSMUSG00000089862.9_1	chr6	+	622	5	FSM	ENSMUSG00000089862.9	ENSMUST00000160705.8	624	5	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGAACCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	8259428	8427278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8401076_8401155_8426970
ENSMUSG00000089862.9_2	chr6	+	558	4	ISM	ENSMUSG00000089862.9	ENSMUST00000160705.8	624	5	11044	1	6	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATTGAACCTGTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	8270471	8427278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_8270582_8373905_8373968_8401076_8401155_8426970
ENSMUSG00000089865.3_2	chr9	+	2515	8	FSM	ENSMUSG00000034563.17	ENST00000310958.10	2537	8	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCATGTTACTATAATA	NA	NA	NA	NA	NA	NA	NA	NA	72892677	72920620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72892956_72904683_72904753_72906305_72906421_72906744_72906822_72908958_72909158_72912922_72913175_72917578_72917695_72919211
ENSMUSG00000089872.11_0	chr1	-	3975	15	FSM	ENSMUSG00000089872.11	ENSMUST00000061611.15	3995	15	12	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTGTCTGCCTTCCTC	NA	NA	NA	NA	NA	NA	NA	NA	190643955	190505083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190566202_190566296_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190637279_190637316_190643752
ENSMUSG00000089872.11_6	chr1	-	3282	15	FSM	ENSMUSG00000089872.11	ENST00000543470.5	3304	15	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAGATGAACACCACAAGG	NA	NA	NA	NA	NA	NA	NA	NA	190643955	190505798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_190505901_190514731_190514828_190515760_190515844_190530848_190530939_190531209_190532779_190541079_190541213_190542270_190542319_190576683_190576800_190603788_190604149_190617530_190617625_190620845_190620962_190631647_190631769_190635987_190636103_190637279_190637316_190643752
ENSMUSG00000089883.2_0	chr17	-	464	1	FSM	ENSMUSG00000089883.2	ENSMUST00000160079.2	487	1	14	9	14	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACCTAACGTACACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14083051	14082587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_14082600_14083100
ENSMUSG00000089889.3_0	chr5	+	589	3	FSM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	2	9	2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAAGCATAATGTCGAAG	NA	NA	NA	NA	NA	NA	NA	NA	143315083	143318447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143315109_143316458_143316641_143318065
ENSMUSG00000089889.3_1	chr5	+	544	2	ISM	ENSMUSG00000089889.3	ENSMUST00000162890.2	600	3	1395	11	1395	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGTCAAGCATAATGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	143316476	143318445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_143316641_143318065
ENSMUSG00000089890.2_0	chr6	-	624	2	FSM	ENSMUSG00000089890.2	ENSMUST00000161366.2	626	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCTTCCTTTACTACC	NA	NA	NA	NA	NA	NA	NA	NA	8364134	8354055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_8354405_8363859
ENSMUSG00000089901.2_0	chr14	+	2697	2	FSM	ENSMUSG00000089901.2	ENSMUST00000160298.2	2721	2	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCACGGAAGAACCTGGCG	NA	NA	NA	NA	NA	NA	NA	NA	44162862	44170860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_44163063_44168363
ENSMUSG00000089911.5_0	chr3	-	2765	12	FSM	ENSMUSG00000089911.5	ENSMUST00000029570.9	2782	12	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	683	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTCTTGATCTGTGA	NA	NA	NA	NA	NA	NA	NA	NA	116456314	116424817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116426130_116427370_116427535_116428551_116428650_116429926_116430040_116434035_116434108_116434895_116435010_116435358_116435578_116439014_116439130_116441430_116441559_116442167_116442231_116445052_116445149_116456043
ENSMUSG00000089917.8_0	chr2	-	1828	15	FSM	ENSMUSG00000089917.8	ENSMUST00000057816.15	1849	15	12	9	12	4	multi-exon	FALSE	canonical	NA	NA	NA	NA	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAATGATCGTGTGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	181223789	181210950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212196_181212292_181212392_181214262_181214280_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089917.8_8	chr2	-	1862	13	FSM	ENSMUSG00000089917.8	ENST00000358711.7	1880	13	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTTTATTTAGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	181223755	181210962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_181211184_181211260_181211418_181211488_181211597_181211701_181211825_181211925_181211989_181212101_181212392_181214866_181214929_181215007_181215198_181216004_181216077_181216161_181216333_181216443_181216551_181216639_181216831_181223648
ENSMUSG00000089940.2_0	chr13	+	52376	2	FSM	ENSMUSG00000089940.2	ENSMUST00000044500.6	52401	2	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAAGATAGAAGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	89887591	89990480	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_89887710_89938222
ENSMUSG00000089945.14_0	chr4	+	5158	9	FSM	ENSMUSG00000089945.14	ENSMUST00000150412.4	5163	9	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGAAGGGGAGGCGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	57637827	57894718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57638091_57647989_57648121_57688415_57688531_57689522_57689545_57757600_57757684_57854561_57857038_57883023_57883203_57886288_57886328_57892868
ENSMUSG00000089945.14_4	chr4	+	7187	4	FSM	ENSMUSG00000038729.25	ENSMUST00000043456.12	7211	4	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTTTTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57854176	57896976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57857038_57883023_57883203_57886288_57886328_57892868
ENSMUSG00000089945.14_5	chr4	+	6765	3	FSM	ENSMUSG00000038729.25	ENSMUST00000098064.9	7172	3	401	6	401	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTTTTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57854559	57896976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57857038_57883023_57883203_57892868
ENSMUSG00000089945.14_6	chr4	+	6904	2	FSM	ENSMUSG00000038729.25	ENSMUST00000102902.4	6993	2	83	6	83	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGTTTTTCTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	57854241	57896976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57857038_57892868
ENSMUSG00000089951.9_0	chr2	+	631	4	FSM	ENSMUSG00000089951.9	ENSMUST00000108995.9	643	4	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATGTTTGTGAAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	176115390	176127546	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176115528_176123621_176123749_176123953_176124015_176127240
ENSMUSG00000089951.9_1	chr2	+	3426	3	FSM	ENSMUSG00000089951.9	ENSMUST00000127687.8	1127	3	-55	-2244	12	-431	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCATGTGGTATTGCCTT	NA	NA	NA	NA	NA	NA	NA	NA	176115398	176127123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176115528_176123621_176123749_176123953
ENSMUSG00000089989.11_1	chr7	-	1467	13	FSM	ENSMUSG00000089989.11	ENSMUST00000209467.2	1477	13	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	767	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTGCCTGGCCTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44785646	44775346	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44775457_44775538_44775662_44775901_44775962_44776132_44776219_44776414_44776517_44776632_44776699_44776919_44776993_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441
ENSMUSG00000089996.7_3	chrX	-	643	3	FSM	ENSMUSG00000089996.7	ENSMUST00000069803.5	450	3	77	-270	77	270	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAACCTCTTGAGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	135858697	135855743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_135856232_135857483_135857589_135858647
ENSMUSG00000089998.3_0	chr3	-	4044	1	FSM	ENSMUSG00000089998.3	ENSMUST00000160110.2	4046	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACAACTTTTTCTCTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	103875895	103871851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_103871900_103875900
ENSMUSG00000090000.3_0	chr18	+	1388	3	FSM	ENSMUSG00000090000.3	ENSMUST00000026487.6	1402	3	9	5	9	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2681	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAAGCGTCTGATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	77017721	77029303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_77017913_77027263_77027366_77028208
ENSMUSG00000090015.9_0	chr5	+	2393	4	FSM	ENSMUSG00000090015.9	ENSMUST00000112544.8	2417	4	18	6	18	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	110071283	110091796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_110071633_110088291_110088419_110088605_110088667_110089940
ENSMUSG00000090026.2_0	chr12	-	754	2	FSM	ENSMUSG00000090026.2	ENSMUST00000161925.2	762	2	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCTTCTGGAAATTCTT	NA	NA	NA	NA	NA	NA	NA	NA	111698264	111696534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111697039_111698014
ENSMUSG00000090034.2_0	chr10	-	479	3	FSM	ENSMUSG00000090034.2	ENSMUST00000162771.2	487	3	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAACCCAGGCTGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81411773	81408452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81408672_81409774_81409870_81411608
ENSMUSG00000090035.4_0	chr10	+	5073	1	FSM	ENSMUSG00000090035.4	ENSMUST00000161240.4	5089	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAATTCTGATGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	98944029	98949102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_98944000_98949100
ENSMUSG00000090053.10_0	chr4	+	2941	6	FSM	ENSMUSG00000090053.10	ENSMUST00000102904.10	2958	6	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCTCAGAAAAAAAATAGTA	NA	NA	NA	NA	NA	NA	NA	NA	57568170	57711797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_57568416_57638009_57638091_57647989_57648121_57688415_57688531_57689522_57689545_57709450
ENSMUSG00000090066.3_0	chr3	+	9713	2	FSM	ENSMUSG00000090066.3	ENSMUST00000163080.3	9741	2	13	15	13	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACCACAAAAGAAAACATAC	NA	NA	NA	NA	NA	NA	NA	NA	137770825	137787252	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137776211_137782924
ENSMUSG00000090083.12_0	chr17	+	5387	8	FSM	ENSMUSG00000090083.12	ENSMUST00000024817.15	5404	8	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	673	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTACACTGGCTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	29833772	29863957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29834053_29840482_29840612_29845479_29846224_29847933_29847997_29850644_29850735_29853634_29853743_29854791_29854997_29860189
ENSMUSG00000090084.8_0	chrX	-	1678	9	FSM	ENSMUSG00000090084.8	ENST00000432886.6	1694	9	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAAACTTACTAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	9983895	9904811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_9905340_9913913_9914036_9915854_9915989_9921090_9921271_9921917_9922040_9925191_9925319_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090084.8_1	chrX	-	1733	9	FSM	ENSMUSG00000090084.8	ENST00000538295.5	1749	9	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAAACTTACTAAAACT	NA	NA	NA	NA	NA	NA	NA	NA	9983896	9904812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_9905340_9915854_9915989_9921090_9921271_9921917_9922040_9925191_9925319_9933663_9933841_9935611_9935804_9940007_9940068_9983682
ENSMUSG00000090086.8_0	chr5	-	527	3	FSM	ENSMUSG00000090086.8	ENST00000538335.1	549	3	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAAGGTAACAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	123280166	123277940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_123278037_123279416_123279460_123279778
ENSMUSG00000090093.9_0	chr2	-	695	3	FSM	ENSMUSG00000090093.9	ENSMUST00000109059.8	703	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCGTTTTGTGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	174983792	174974282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174974783_174974988_174975116_174983724
ENSMUSG00000090093.9_1	chr2	-	628	2	FSM	ENSMUSG00000090093.9	ENSMUST00000099029.4	192	2	-1	-435	-1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATCGTTTTGTGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	174975116	174974282	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_174974783_174974988
ENSMUSG00000090100.8_0	chr2	-	11050	15	FSM	ENSMUSG00000090100.8	ENSMUST00000057135.14	11066	15	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAAACTTTAGTGCTATT	NA	NA	NA	NA	NA	NA	NA	NA	120680878	120563303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_120570676_120575499_120576771_120578915_120579505_120580718_120580931_120586310_120586528_120590677_120590836_120603709_120603836_120604300_120604394_120608014_120608081_120614175_120614281_120616459_120616601_120620762_120620837_120637239_120637388_120652953_120653090_120680536
ENSMUSG00000090110.9_0	chrX	-	968	3	FSM	ENSMUSG00000090110.9	ENSMUST00000033543.14	992	3	13	11	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTAAATTTTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	74460158	74448462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74448825_74453151_74453220_74459620
ENSMUSG00000090110.9_1	chrX	-	852	3	FSM	ENSMUSG00000090110.9	ENST00000369479.1	876	3	11	13	11	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACATGTATTACAT	NA	NA	NA	NA	NA	NA	NA	NA	74454698	74448475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_74448825_74453151_74453220_74454263
ENSMUSG00000090112.9_1	chr10	+	9253	30	FSM	ENSMUSG00000090112.9	ENSMUST00000044053.13	9271	30	8	10	8	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACTCAATTTTGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	11025181	11093329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11088065_11088147_11089191
ENSMUSG00000090112.9_5	chr10	+	6670	29	FSM	ENSMUSG00000090112.9	ENSMUST00000159541.8	6679	29	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTATACCCATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	11025268	11085288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_11025331_11027356_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11083565
ENSMUSG00000090112.9_7	chr10	+	6593	28	ISM	ENSMUSG00000090112.9	ENSMUST00000159541.8	6679	29	2104	8	2104	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTATACCCATGTAA	NA	NA	NA	NA	NA	NA	NA	NA	11027371	11085288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_11028013_11030402_11030533_11032763_11032983_11035261_11035341_11036210_11036362_11037862_11037972_11038552_11038807_11040088_11040740_11042229_11042482_11043577_11043657_11045722_11045887_11045990_11046248_11047616_11047739_11054477_11054567_11057255_11057349_11059517_11059626_11061063_11061207_11062124_11062299_11062586_11062650_11063683_11063910_11065374_11065519_11066729_11066832_11068229_11068302_11069924_11070114_11080924_11081018_11082012_11082100_11082840_11083020_11083565
ENSMUSG00000090113.8_0	chr17	-	2142	2	FSM	ENSMUSG00000090113.8	ENSMUST00000085027.4	2142	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTAGGGGTATTGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	26163906	26161206	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_26163293_26163850
ENSMUSG00000090113.8_1	chr17	-	2079	1	ISM	ENSMUSG00000090113.8	ENSMUST00000085027.4	2142	2	615	6	615	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCGTTGTTAGGGGTATT	NA	NA	NA	NA	NA	NA	NA	NA	26163291	26161212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_26161200_26163300
ENSMUSG00000090115.8_0	chr17	+	3152	9	FSM	ENSMUSG00000023984.18	ENST00000684631.1	3161	9	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAAAGCACTGCACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	47923895	47992119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47924047_47929738_47929988_47933809_47934080_47960874_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990795_47991606
ENSMUSG00000090115.8_3	chr17	+	2015	6	FSM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCAAAACGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47960877	47991806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47960949_47982968_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ENSMUSG00000090115.8_6	chr17	+	1945	5	ISM	ENSMUSG00000090115.8	ENST00000373010.5	2029	6	22094	10	22094	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATCAAAACGGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	47982967	47991806	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_47984344_47985640_47985846_47989768_47989878_47990588_47990644_47991606
ENSMUSG00000090120.2_0	chr3	-	580	3	ISM	ENSMUSG00000090120.2	ENSMUST00000160137.2	627	4	379	1	379	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCAGCCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	65256471	65232197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_65232502_65233573_65233805_65256426
ENSMUSG00000090120.2_1	chr3	-	619	4	FSM	ENSMUSG00000090120.2	ENSMUST00000160137.2	627	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGAAGCTTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	65256850	65232204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_65232502_65233573_65233805_65256426_65256489_65256821
ENSMUSG00000090120.2_2	chr3	-	537	2	ISM	ENSMUSG00000090120.2	ENSMUST00000160137.2	627	4	23044	1	23044	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGCTTGCAGCCTGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	65233806	65232197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_65232502_65233573
ENSMUSG00000090124.8_1	chr1	+	798	2	FSM	ENSMUSG00000090124.8	ENST00000447084.1	808	2	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACTTTCCAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	87983244	88023684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87983514_88023155
ENSMUSG00000090136.5_0	chr9	+	392	1	FSM	ENSMUSG00000090136.5	ENSMUST00000160052.2	444	1	20	32	20	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	441	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATAACAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37164237	37164629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_37164200_37164600
ENSMUSG00000090137.9_0	chr8	-	693	4	FSM	ENSMUSG00000090137.9	ENSMUST00000125184.8	711	4	10	8	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	18732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	70963221	70960920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962987
ENSMUSG00000090137.9_3	chr8	-	683	4	FSM	ENSMUSG00000090137.9	ENSMUST00000129909.8	705	4	14	8	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	70962991	70960920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70961179_70961945_70962033_70962170_70962285_70962767
ENSMUSG00000090137.9_5	chr8	-	533	4	FSM	ENSMUSG00000090137.9	ENSMUST00000081940.11	541	4	3	5	3	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	2080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTAATTGGTGTCTAGA	NA	NA	NA	NA	NA	NA	NA	NA	70963064	70960920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70961179_70961945_70962033_70962170_70962282_70962987
ENSMUSG00000090150.11_1	chr9	+	3104	20	FSM	ENSMUSG00000090150.11	ENSMUST00000120854.8	3108	20	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAGAGAAATATTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	103940579	104004662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_103940720_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
ENSMUSG00000090150.11_2	chr9	+	3423	20	FSM	ENSMUSG00000090150.11	ENSMUST00000047799.13	3444	20	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAATTATTTTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103940900	104004919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_103941103_103950820_103950921_103953015_103953142_103953528_103953691_103955761_103955927_103958429_103958572_103958896_103959019_103959989_103960097_103961359_103961487_103967456_103967535_103968790_103968930_103972719_103972828_103974552_103974652_103990660_103990728_103991651_103991738_103992476_103992549_103993363_103993519_104000245_104000363_104001216_104001327_104003780
ENSMUSG00000090165.9_0	chr1	+	2201	5	FSM	ENSMUSG00000090165.9	ENSMUST00000113142.10	2244	5	36	7	36	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACTACTCTTCTTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	87983168	88146719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_87984059_88142765_88142898_88143516_88143605_88143859_88144080_88145848
ENSMUSG00000090176.2_0	chr16	+	1734	6	FSM	ENSMUSG00000090176.2	ENSMUST00000102805.4	1750	6	0	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATGTACAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44687459	44736187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_44687505_44698155_44698388_44729410_44729726_44729836_44730086_44734918_44735034_44735409
ENSMUSG00000090176.2_2	chr16	+	1672	5	ISM	ENSMUSG00000090176.2	ENSMUST00000102805.4	1750	6	10716	13	10716	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGTACAGTTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	44698175	44736190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_44698388_44729410_44729726_44729836_44730086_44734918_44735034_44735409
ENSMUSG00000090210.8_0	chr3	+	3822	25	FSM	ENSMUSG00000090210.8	ENST00000539363.2	3841	25	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3315	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGGGAGCTTGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	96556357	96571158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96556476_96556888_96557038_96557716_96557868_96558466_96558633_96558738_96558813_96559061_96559207_96559398_96559548_96559789_96559934_96560074_96560279_96560927_96561059_96562036_96562204_96562308_96562452_96562820_96562935_96563105_96563192_96563467_96563610_96563756_96563850_96564011_96564089_96564252_96564340_96564742_96564828_96564969_96565084_96565274_96565356_96565488_96565603_96569139_96569236_96569910_96570025_96570280
ENSMUSG00000090213.2_0	chr2	-	2292	6	FSM	ENSMUSG00000090213.2	ENSMUST00000006587.7	2329	6	25	12	25	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTACTACAACTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	167503451	167484539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488887_167488980_167496527_167496648_167503292
ENSMUSG00000090213.2_1	chr2	-	1752	6	FSM	ENSMUSG00000090213.2	ENST00000371650.9	1762	6	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGAGGGAGCTAGCCCTG	NA	NA	NA	NA	NA	NA	NA	NA	167503492	167485111	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_167486103_167486683_167486897_167487951_167488097_167488896_167488980_167496527_167496648_167503292
ENSMUSG00000090224.2_0	chr17	-	509	1	FSM	ENSMUSG00000090224.2	ENSMUST00000159103.2	531	1	10	12	10	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGAAGTAAGCAATGGA	NA	NA	NA	NA	NA	NA	NA	NA	68678795	68678286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_68678300_68678800
ENSMUSG00000090231.11_0	chr17	-	2713	18	FSM	ENSMUSG00000090231.11	ENSMUST00000025229.11	2737	18	24	0	24	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAACAAGTGTGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	35081466	35075359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35075559_35075855_35075906_35075979_35076113_35076194_35076296_35076467_35076545_35076643_35076798_35077012_35077131_35077473_35077572_35077984_35078123_35078205_35078308_35078417_35078550_35078911_35079051_35079261_35079399_35079499_35079602_35079738_35079913_35080003_35080190_35080706_35080941_35081027
ENSMUSG00000090235.2_0	chr19	+	2318	2	FSM	ENSMUSG00000090235.2	ENSMUST00000159313.2	2327	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTTTATTATTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	42767479	42769893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_42767783_42767878
ENSMUSG00000090247.8_0	chr10	-	534	4	FSM	ENSMUSG00000090247.8	ENSMUST00000026405.10	550	4	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1750	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTATGTGGTGTGTTTGA	NA	NA	NA	NA	NA	NA	NA	NA	128759382	128755787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128755977_128756427_128756561_128758522_128758596_128759243
ENSMUSG00000090258.8_0	chr12	+	659	4	FSM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGAAAATTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76812317	76829943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_76812413_76820031_76820168_76822367_76822439_76829586
ENSMUSG00000090258.8_1	chr12	+	565	3	ISM	ENSMUSG00000090258.8	ENSMUST00000041262.14	676	4	7719	11	7682	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGAAAATTGTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	76820030	76829943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_76820168_76822367_76822439_76829586
ENSMUSG00000090266.11_0	chr11	+	1254	5	FSM	ENSMUSG00000090266.11	ENSMUST00000106370.10	1276	5	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGCTTAGACTACTCC	NA	NA	NA	NA	NA	NA	NA	NA	116734114	116740555	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116734601_116739079_116739185_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_2	chr11	+	621	4	FSM	ENSMUSG00000090266.11	ENST00000586752.5	639	4	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGTCAAAATGGAATAACC	NA	NA	NA	NA	NA	NA	NA	NA	116734530	116740410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116734634_116739726_116739965_116740041_116740127_116740215
ENSMUSG00000090266.11_9	chr11	+	533	3	FSM	ENSMUSG00000090266.11	ENST00000588302.5	546	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTGAATTATCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	116739739	116740434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_116739965_116740041_116740131_116740215
ENSMUSG00000090272.10_0	chr1	-	2013	10	FSM	ENSMUSG00000090272.10	ENSMUST00000188804.7	2026	10	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGGACATCATTATATAG	NA	NA	NA	NA	NA	NA	NA	NA	173707865	173684792	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173685077_173687741_173687931_173690026_173690450_173692964_173693124_173698943_173699112_173700417_173700586_173701916_173702039_173703141_173703427_173707490_173707557_173707716
ENSMUSG00000090290.3_0	chr8	-	6374	30	FSM	ENSMUSG00000090290.3	ENSMUST00000170518.3	6383	30	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATAAACTTTTTATATAA	NA	NA	NA	NA	NA	NA	NA	NA	127201803	127152075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_127153880_127154161_127154299_127154556_127154682_127154813_127155006_127155619_127155792_127157560_127157643_127160586_127160784_127161536_127161624_127163441_127163592_127165541_127165653_127167492_127167614_127170668_127170741_127170873_127171065_127173778_127173968_127174059_127174322_127174951_127175167_127177402_127177565_127178971_127179070_127179528_127179702_127180537_127180635_127182807_127182944_127183215_127183306_127184402_127184500_127185775_127185912_127188076_127188175_127189921_127189975_127193772_127193922_127196757_127196828_127198040_127198139_127200993
ENSMUSG00000090314.3_0	chr3	-	932	2	FSM	ENSMUSG00000090314.3	ENST00000368775.3	950	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	543	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCAAGGCACGGCGGCTC	NA	NA	NA	NA	NA	NA	NA	NA	92776668	92775676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92776421_92776480
ENSMUSG00000090317.2_0	chr9	-	886	1	FSM	ENSMUSG00000090317.2	ENSMUST00000165499.2	922	1	28	8	28	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGCTTAAACATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	78356040	78355154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_78355200_78356000
ENSMUSG00000090326.3_0	chr5	+	2247	9	FSM	ENSMUSG00000090326.3	ENST00000357504.7	2264	9	13	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAAAAAAGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	62969028	63045646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_62969421_62975881_62976213_62979226_62979407_62984361_62984613_62996582_62996748_63000160_63000448_63007068_63007308_63039606_63039665_63045302
ENSMUSG00000090330.3_0	chr7	+	1432	2	FSM	ENSMUSG00000090330.3	ENSMUST00000169914.2	1465	2	20	13	20	-13	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTCACAATCACAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	24928131	24929669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24928199_24928304
ENSMUSG00000090386.11_0	chr16	+	712	3	FSM	ENSMUSG00000090386.11	ENST00000653809.1	721	3	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAGCGTTAGCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	77033154	77036052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_77033224_77033852_77034139_77035695
ENSMUSG00000090386.11_1	chr16	+	306	2	FSM	ENSMUSG00000090386.11	ENST00000619222.4	313	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGGTGAGAAACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	77033177	77034131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_77033205_77033852
ENSMUSG00000090386.11_3	chr16	+	266	1	ISM	ENSMUSG00000090386.11	ENST00000653809.1	721	3	711	1930	659	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	610	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTGGTGAGAAACTCAT	NA	NA	NA	NA	NA	NA	NA	NA	77033865	77034131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_77033900_77034100
ENSMUSG00000090394.9_0	chr1	+	5625	3	FSM	ENSMUSG00000090394.9	ENSMUST00000163892.8	5652	3	15	12	15	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGGAGAAATACATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	159871968	159907766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_159872324_159898269_159898374_159902600
ENSMUSG00000090397.2_0	chr2	+	722	2	FSM	ENSMUSG00000090397.2	ENSMUST00000172037.2	733	2	4	7	4	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCAGGCATAAGCCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	166785462	166786221	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_166785831_166785867
ENSMUSG00000090439.4_0	chr10	+	833	2	FSM	ENSMUSG00000090439.4	ENSMUST00000164428.3	858	2	12	13	12	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATACCCAAAGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	60235516	60239325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_60235756_60238731
ENSMUSG00000090523.3_0	chr18	-	2161	3	FSM	ENSMUSG00000090523.3	ENSMUST00000174459.2	2180	3	11	8	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGAATTGTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	32693076	32661382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_32663255_32665786_32665838_32692838
ENSMUSG00000090523.3_1	chr18	-	2059	2	FSM	ENSMUSG00000090523.3	ENSMUST00000174000.2	2072	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGAATTGTTTAGGT	NA	NA	NA	NA	NA	NA	NA	NA	32693025	32661382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_32663255_32692838
ENSMUSG00000090553.9_0	chr1	-	482	5	FSM	ENSMUSG00000090553.9	ENSMUST00000166915.8	503	5	12	9	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTTACATTGTTTCAT	NA	NA	NA	NA	NA	NA	NA	NA	133538017	133531617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133531815_133534238_133534318_133536634_133536698_133537455_133537483_133537901
ENSMUSG00000090555.2_0	chr12	-	1169	5	FSM	ENSMUSG00000090555.2	ENST00000636712.1	1181	5	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGCAGCAGCTACAGTC	NA	NA	NA	NA	NA	NA	NA	NA	103794301	103784263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103784307_103785107_103785259_103786143_103786415_103787874_103788507_103794229
ENSMUSG00000090555.2_1	chr12	-	1096	4	FSM	ENSMUSG00000090555.2	ENSMUST00000172146.2	1242	4	-4	150	-4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTGCAGCAGCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	103788506	103784264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_103784307_103785107_103785259_103786143_103786415_103787874
ENSMUSG00000090625.2_3	chr2	-	1458	12	Fusion	ENSMUSG00000086537.8_ENSMUSG00000090625.2	novel	2248	5	NA	NA	-32	-101	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAGGGATGGGTAAA	NA	NA	NA	NA	NA	NA	NA	NA	174188537	174126246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr2_-_174126300_174176002_174176078_174178539_174178582_174183440_174183501_174183602_174183721_174184990_174185091_174186867_174186920_174187017_174187095_174187175_174187356_174187441_174187573_174187782_174187848_174188032
ENSMUSG00000090626.10_1	chr9	-	5246	10	NNC	ENSMUSG00000090626.10	novel	3904	11	NA	NA	29930	20032	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCACCGCCCGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	72369308	72345821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_72345961_72346520_72346744_72352124_72352250_72353485_72353591_72355809_72356041_72356432_72356648_72356731_72356842_72359862_72360121_72364059_72364186_72365594
ENSMUSG00000090626.10_24	chr9	-	3866	11	FSM	ENSMUSG00000090626.10	ENSMUST00000085358.12	3904	11	31	7	31	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAAAGTACTAATGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	72399207	72365860	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ENSMUSG00000090626.10_25	chr9	-	2775	12	FSM	ENSMUSG00000090626.10	ENSMUST00000184125.8	2794	12	13	6	13	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATTTTAAGTTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	72399370	72367007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387878_72388058_72389728_72389812_72391350_72391397_72394061_72394142_72395293_72395358_72399020_72399101_72399207
ENSMUSG00000090626.10_26	chr9	-	1649	11	FSM	ENSMUSG00000090626.10	ENSMUST00000184831.8	1652	11	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATGTTGGAAGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	72399491	72368356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_72368561_72369137_72369273_72380939_72381075_72385018_72385193_72385621_72385705_72387205_72387284_72387878_72388058_72391350_72391397_72394061_72394142_72395293_72395358_72399020
ENSMUSG00000090631.4_0	chr6	-	1026	1	FSM	ENSMUSG00000090631.4	ENSMUST00000057251.8	1052	1	19	7	19	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCCTGTCACTAAAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	42464129	42463103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42463100_42464100
ENSMUSG00000090655.3_0	chr17	-	4563	7	FSM	ENSMUSG00000090655.3	ENSMUST00000234508.2	4588	7	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATACAAAGCATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	57852487	57813459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57816685_57828924_57829049_57829350_57829579_57831974_57832278_57832667_57832980_57843644_57843719_57852190
ENSMUSG00000090655.3_1	chr17	-	4607	7	FSM	ENSMUSG00000090655.3	ENSMUST00000234883.2	4660	7	46	7	46	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATACAAAGCATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	57852459	57813459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57816685_57828924_57829049_57829350_57829579_57831974_57832350_57832667_57832980_57843644_57843719_57852190
ENSMUSG00000090655.3_3	chr17	-	4397	6	FSM	ENSMUSG00000090655.3	ENSMUST00000234476.2	4432	6	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATACAAAGCATTGATT	NA	NA	NA	NA	NA	NA	NA	NA	57852477	57813459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_57816685_57828924_57829049_57831974_57832350_57832667_57832980_57843644_57843719_57852190
ENSMUSG00000090714.11_0	chr7	-	2255	4	FSM	ENSMUSG00000090714.11	ENSMUST00000067210.12	2272	4	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATTGCTCAGAGTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	10900076	10895307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_10896834_10896917_10897078_10898900_10899373_10899979
ENSMUSG00000090733.7_0	chr3	-	341	4	FSM	ENSMUSG00000090733.7	ENSMUST00000170122.4	345	4	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	4430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAATGTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90120958	90119981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_90120061_90120240_90120352_90120499_90120609_90120916
ENSMUSG00000090733.7_1	chr3	-	278	3	ISM	ENSMUSG00000090733.7	ENSMUST00000195998.5	458	5	367	8	367	-4	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	1174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATATAATGTTTGTCTTGT	NA	NA	NA	NA	NA	NA	NA	NA	90120587	90119981	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_90120061_90120240_90120352_90120499
ENSMUSG00000090761.2_0	chr10	-	371	2	FSM	ENSMUSG00000090761.2	ENSMUST00000167226.2	390	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTGCTTCCCTAACAG	NA	NA	NA	NA	NA	NA	NA	NA	128231422	128227719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128227943_128231274
ENSMUSG00000090762.3_0	chr7	-	7810	6	FSM	ENSMUSG00000090762.3	ENSMUST00000233874.2	7819	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTCAAGGTAGGTATTG	NA	NA	NA	NA	NA	NA	NA	NA	12468931	12422656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12428830_12444195_12444320_12446876_12447068_12449276_12449952_12466747_12467040_12468576
ENSMUSG00000090799.3_0	chr14	-	1419	2	FSM	ENSMUSG00000090799.3	ENSMUST00000170855.2	1422	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCCTATGCAGTTATACC	NA	NA	NA	NA	NA	NA	NA	NA	51134913	51133401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_51134167_51134259
ENSMUSG00000090812.9_0	chr12	+	2009	4	FSM	ENSMUSG00000090812.9	ENSMUST00000182869.2	2031	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTCAACTCAGCAGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	87247330	87260307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87248811_87249811_87249911_87255473_87255723_87260126
ENSMUSG00000090841.3_10	chr10	-	691	7	FSM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	5459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128329726	128326729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUSG00000090841.3_11	chr10	-	643	6	ISM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	290	0	257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128329436	128326729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470_128328615_128329407
ENSMUSG00000090841.3_2	chr10	-	663	6	FSM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	8035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128329742	128326728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407_128329436_128329677
ENSMUSG00000090841.3_3	chr10	-	599	5	ISM	ENSMUSG00000090841.3	ENSMUST00000164181.2	665	6	308	0	257	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128329436	128326728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470_128328615_128329407
ENSMUSG00000090841.3_4	chr10	-	573	4	ISM	ENSMUSG00000090841.3	ENSMUST00000217969.2	608	6	1109	-3	1076	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTCTTTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	128328617	128326728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128326903_128327927_128328006_128328097_128328272_128328470
ENSMUSG00000090841.3_9	chr10	-	616	5	ISM	ENSMUSG00000090841.3	ENSMUST00000218127.2	691	7	1110	0	1077	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTTTCTTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	128328616	128326729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_128326903_128327588_128327634_128327927_128328006_128328097_128328272_128328470
ENSMUSG00000090862.4_0	chr7	-	576	6	FSM	ENSMUSG00000090862.4	ENSMUST00000170953.3	589	6	6	7	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	7229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGGTGTTTTGTGGTTC	NA	NA	NA	NA	NA	NA	NA	NA	115933424	115930746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115930819_115931613_115931715_115932163_115932334_115932930_115933010_115933134_115933184_115933319
ENSMUSG00000090863.2_0	chr13	-	4805	1	FSM	ENSMUSG00000090863.2	ENSMUST00000170573.2	3200	1	-1643	38	-1643	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCACAAATAAAACTC	NA	NA	NA	NA	NA	NA	NA	NA	31744959	31740154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_31740200_31745000
ENSMUSG00000090935.11_0	chr12	-	4641	4	FSM	ENSMUSG00000090935.11	ENSMUST00000163402.8	4655	4	7	7	-5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGCCAAGTATAATGGTA	NA	NA	NA	NA	NA	NA	NA	NA	81579678	81544721	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81548941_81551317_81551414_81557602_81557740_81579489
ENSMUSG00000090935.11_1	chr12	-	3300	3	FSM	ENSMUSG00000090935.11	ENSMUST00000164431.2	3305	3	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTTGTTTTTGTTTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	81579668	81545915	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81548941_81551317_81551414_81579489
ENSMUSG00000090946.4_0	chr12	+	4210	1	FSM	ENSMUSG00000090946.4	ENSMUST00000172332.4	4240	1	20	10	20	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATATAATGTCTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	32428722	32432932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_32428700_32432900
ENSMUSG00000090952.3_0	chr17	+	906	2	FSM	ENSMUSG00000090952.3	ENSMUST00000170103.3	925	2	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTACCTCTCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	33978976	33980836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33979562_33980515
ENSMUSG00000090958.3_0	chr7	+	4558	3	FSM	ENSMUSG00000090958.3	ENSMUST00000205956.2	4576	3	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCAGGTCCCTTCCCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	98138914	98151381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_98139305_98143420_98143516_98147308
ENSMUSG00000090963.3_0	chr5	-	1763	4	FSM	ENSMUSG00000090963.3	ENSMUST00000210275.2	1776	4	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAACTTGAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	110220379	110194017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110195551_110196887_110196949_110197131_110197259_110220337
ENSMUSG00000090963.3_1	chr5	-	1717	3	ISM	ENSMUSG00000090963.3	ENSMUST00000210275.2	1776	4	23125	13	-2902	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAACTTGAAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	110197254	110194017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_110195551_110196887_110196949_110197131
ENSMUSG00000090981.7_0	chr5	-	4715	5	FSM	ENSMUSG00000090981.7	ENSMUST00000213631.2	4737	5	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGCTACTCGGCGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	143133298	143119776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_143123973_143127002_143127211_143130169_143130262_143132508_143132627_143133197
ENSMUSG00000090996.2_0	chr2	+	1333	6	FSM	ENSMUSG00000090996.2	ENSMUST00000164863.2	1369	6	17	19	17	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAATAATAATATAC	NA	NA	NA	NA	NA	NA	NA	NA	164302903	164332661	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164303041_164303212_164303450_164305220_164305289_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000090996.2_1	chr2	+	1229	4	FSM	ENSMUSG00000017734.16	ENST00000372720.7	1239	4	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGATGTTCTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164328202	164332585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164328488_164330032_164330309_164330487_164330626_164332055
ENSMUSG00000090996.2_5	chr2	+	1338	4	FSM	ENSMUSG00000017734.16	ENST00000372712.6	1344	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGATGTTCTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164329058	164332585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164329582_164330161_164330309_164330487_164330626_164332055
ENSMUSG00000090996.2_7	chr2	+	1322	3	FSM	ENSMUSG00000017734.16	ENSMUST00000017878.3	1338	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTCATTTCACCTCATT	NA	NA	NA	NA	NA	NA	NA	NA	164329748	164332679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164330309_164330487_164330626_164332055
ENSMUSG00000090996.2_8	chr2	+	907	3	FSM	ENSMUSG00000017734.16	ENST00000372722.7	914	3	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGATGTTCTGAGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	164330170	164332585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_164330309_164330487_164330727_164332055
ENSMUSG00000091007.2_0	chr12	-	934	1	FSM	ENSMUSG00000091007.2	ENSMUST00000171007.2	940	1	6	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTGTATTCCACACTCA	NA	NA	NA	NA	NA	NA	NA	NA	36432174	36431240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_36431200_36432200
ENSMUSG00000091013.4_0	chr1	-	3631	3	FSM	ENSMUSG00000091013.4	ENSMUST00000227629.2	3654	3	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTTTGTCATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	181992030	181982270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_181985696_181986771_181986905_181991957
ENSMUSG00000091013.4_1	chr1	-	3559	2	ISM	ENSMUSG00000091013.4	ENSMUST00000227629.2	3654	3	5146	2	-1242	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTGTTTGTCATCCACC	NA	NA	NA	NA	NA	NA	NA	NA	181986905	181982270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_181985696_181986771
ENSMUSG00000091014.4_0	chr19	+	739	1	FSM	ENSMUSG00000091014.4	ENSMUST00000189517.2	743	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGGAATGCTCCTTCA	NA	NA	NA	NA	NA	NA	NA	NA	12824049	12824788	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12824000_12824800
ENSMUSG00000091021.2_0	chr4	+	1503	2	FSM	ENSMUSG00000091021.2	ENSMUST00000172202.2	1527	2	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCAACTCAGTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	132079101	132080688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_132080032_132080115
ENSMUSG00000091028.2_0	chr9	+	644	3	NNC	ENSMUSG00000091028.2	novel	651	4	NA	NA	0	-587	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCATATTCCAAGTCCTAC	NA	NA	NA	NA	NA	NA	NA	NA	3000921	3001743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3001445_3001504_3001608_3001725
ENSMUSG00000091028.2_1	chr9	+	648	2	NIC	ENSMUSG00000091028.2	novel	651	4	NA	NA	0	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3000921	3002330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3001445_3002205
ENSMUSG00000091028.2_4	chr9	+	681	3	NNC	ENSMUSG00000091028.2	novel	651	4	NA	NA	204	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCCACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3001125	3002330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3001478_3001941_3002146_3002205
ENSMUSG00000091028.2_6	chr9	+	664	4	Fusion	ENSMUSG00000091028.2_ENSMUSG00000096385.8	novel	651	4	NA	NA	216	1280	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCATATTCCATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3001137	3003610	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr9_+_3001478_3001941_3002146_3002205_3002215_3003499
ENSMUSG00000091055.3_0	chr18	-	1145	6	FSM	ENSMUSG00000091055.3	ENSMUST00000170760.3	1156	6	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAGAAATAAAGGACAGTA	NA	NA	NA	NA	NA	NA	NA	NA	78100610	78086839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_78086956_78089340_78089372_78090425_78090801_78091703_78092088_78092444_78092505_78100431
ENSMUSG00000091086.3_0	chr10	+	844	1	FSM	ENSMUSG00000091086.3	ENSMUST00000171120.3	871	1	20	7	20	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTATCCTACCATTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	110961731	110962575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_110961700_110962600
ENSMUSG00000091101.3_0	chr10	+	914	1	FSM	ENSMUSG00000091101.3	ENSMUST00000168769.3	927	1	8	5	8	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAACGGGACCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	100176705	100177619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100176700_100177600
ENSMUSG00000091119.3_0	chr15	-	1324	8	FSM	ENSMUSG00000091119.3	ENSMUST00000226261.2	1327	8	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTTTCTCCGTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	3330675	3309551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3319606_3319710_3321861_3321927_3323334_3323404_3327582_3327689_3330586
ENSMUSG00000091119.3_2	chr15	-	860	6	FSM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTCTTAAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3330673	3309845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_3310232_3310504_3310589_3312299_3312428_3323334_3323404_3327582_3327689_3330586
ENSMUSG00000091119.3_3	chr15	-	775	5	ISM	ENSMUSG00000091119.3	ENST00000388827.4	872	6	2988	7	2988	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTGTCTTAAGCAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3327690	3309845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_3310232_3310504_3310589_3312299_3312428_3323334_3323404_3327582
ENSMUSG00000091183.6_0	chr13	-	3257	4	FSM	ENSMUSG00000091183.6	ENSMUST00000201047.4	3279	4	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACACCCAATATTGACTG	NA	NA	NA	NA	NA	NA	NA	NA	62933611	62920024	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62922977_62924530_62924592_62924776_62924904_62933494
ENSMUSG00000091191.4_0	chr11	-	3113	1	FSM	ENSMUSG00000091191.4	ENSMUST00000238260.3	3144	1	28	3	28	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCGAGTCCGCGGCGCC	NA	NA	NA	NA	NA	NA	NA	NA	53663993	53660880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_53660900_53664000
ENSMUSG00000091228.2_0	chr11	-	978	8	FSM	ENSMUSG00000091228.2	ENSMUST00000170303.2	991	8	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTTTGGAACTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	93859119	93840657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_93840873_93842725_93842839_93843625_93843728_93846320_93846451_93851493_93851607_93854052_93854155_93856633_93856764_93859046
ENSMUSG00000091230.2_0	chr19	-	638	1	FSM	ENSMUSG00000091230.2	ENSMUST00000169692.2	666	1	16	12	16	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGTAGGTTTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	47159557	47158919	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47158900_47159600
ENSMUSG00000091238.2_0	chr16	-	536	2	FSM	ENSMUSG00000091238.2	ENSMUST00000168897.2	549	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATCAAACAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	38393662	38389697	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_38390076_38393504
ENSMUSG00000091239.3_0	chr7	-	11480	6	FSM	ENSMUSG00000091239.3	ENSMUST00000233075.2	11503	6	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGATTTTATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85895503	85851241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_85860974_85877387_85877512_85877865_85878094_85878996_85879804_85880189_85880479_85895203
ENSMUSG00000091239.3_1	chr7	-	25823	6	FSM	ENSMUSG00000091239.3	ENSMUST00000233317.2	25851	6	18	10	18	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGATTTTATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85895498	85851241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_85875322_85877387_85877512_85877865_85878094_85878996_85879804_85880189_85880479_85895203
ENSMUSG00000091239.3_3	chr7	-	14572	6	FSM	ENSMUSG00000091239.3	ENSMUST00000233312.2	14597	6	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGATTTTATTCAAT	NA	NA	NA	NA	NA	NA	NA	NA	85895501	85851241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_85864068_85877387_85877512_85877865_85878094_85878996_85879804_85880189_85880479_85895203
ENSMUSG00000091243.3_0	chr16	+	6993	4	FSM	ENSMUSG00000091243.3	ENSMUST00000168064.3	7009	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAATGATTGGGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	65612151	65663247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_65612645_65624779_65625063_65636094_65636620_65657555
ENSMUSG00000091243.3_2	chr16	+	1970	4	FSM	ENSMUSG00000091243.3	ENST00000398399.7	1982	4	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTGCTGTTATATATGTC	NA	NA	NA	NA	NA	NA	NA	NA	65612221	65658291	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_65612645_65624776_65625063_65636094_65636620_65657555
ENSMUSG00000091264.4_0	chr13	+	4459	2	FSM	ENSMUSG00000091264.4	ENSMUST00000165561.4	4483	2	8	16	8	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAAACAAGTACACT	NA	NA	NA	NA	NA	NA	NA	NA	41403327	41430037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41403791_41426041
ENSMUSG00000091337.4_0	chr2	+	1677	1	FSM	ENSMUSG00000091337.4	ENSMUST00000164756.4	1691	1	13	1	13	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGCTTTGTCTAATAGC	NA	NA	NA	NA	NA	NA	NA	NA	125515027	125516704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_125515000_125516700
ENSMUSG00000091378.2_0	chr19	+	2135	2	FSM	ENSMUSG00000091378.2	ENSMUST00000168140.2	2143	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATAGGTTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59932157	59936826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_59932204_59934737
ENSMUSG00000091378.2_1	chr19	+	2077	1	ISM	ENSMUSG00000091378.2	ENSMUST00000168140.2	2143	2	2596	4	2596	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATAGGTTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	59934749	59936826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_59934700_59936800
ENSMUSG00000091387.3_0	chr13	+	5081	3	FSM	ENSMUSG00000091387.3	ENSMUST00000171324.3	5087	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCAACTCCTCGGACTT	NA	NA	NA	NA	NA	NA	NA	NA	97061202	97087414	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97061457_97072387_97072505_97082704
ENSMUSG00000091405.3_0	chr3	-	1597	1	FSM	ENSMUSG00000091405.3	ENSMUST00000171473.3	1630	1	11	22	11	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAACAAAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	96170616	96169019	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96169000_96170600
ENSMUSG00000091415.6_0	chr10	+	6958	40	FSM	ENSMUSG00000091415.6	ENSMUST00000173494.4	6968	40	0	10	0	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAACTAAAATCCG	NA	NA	NA	NA	NA	NA	NA	NA	41179975	41310520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_41180002_41192231_41192363_41193777_41193842_41196265_41196319_41196416_41196514_41201045_41201159_41203557_41203744_41211897_41212027_41213558_41213634_41216876_41216976_41221107_41221248_41221328_41221510_41223115_41223261_41223990_41224093_41224181_41224266_41227697_41227847_41233500_41233655_41234531_41234647_41243113_41243239_41246039_41246202_41258797_41258885_41259349_41259551_41259904_41260027_41264947_41265161_41268477_41268739_41272156_41272282_41275667_41275888_41278227_41278294_41282823_41283031_41283345_41283565_41284940_41285155_41296483_41296686_41298368_41298516_41298877_41299099_41300589_41300787_41303223_41303394_41304306_41304406_41306748_41306852_41308436_41308552_41309081
ENSMUSG00000091415.6_4	chr10	+	6904	39	ISM	ENSMUSG00000091415.6	ENSMUST00000173494.4	6968	40	12284	10	12284	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAAAATAACTAAAATCCG	NA	NA	NA	NA	NA	NA	NA	NA	41192259	41310520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_41192363_41193777_41193842_41196265_41196319_41196416_41196514_41201045_41201159_41203557_41203744_41211897_41212027_41213558_41213634_41216876_41216976_41221107_41221248_41221328_41221510_41223115_41223261_41223990_41224093_41224181_41224266_41227697_41227847_41233500_41233655_41234531_41234647_41243113_41243239_41246039_41246202_41258797_41258885_41259349_41259551_41259904_41260027_41264947_41265161_41268477_41268739_41272156_41272282_41275667_41275888_41278227_41278294_41282823_41283031_41283345_41283565_41284940_41285155_41296483_41296686_41298368_41298516_41298877_41299099_41300589_41300787_41303223_41303394_41304306_41304406_41306748_41306852_41308436_41308552_41309081
ENSMUSG00000091449.4_0	chr18	-	332	1	FSM	ENSMUSG00000091449.4	ENSMUST00000165229.4	370	1	31	7	31	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCCTGAGATGACAACGA	NA	NA	NA	NA	NA	NA	NA	NA	20815989	20815657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_20815700_20816000
ENSMUSG00000091474.3_0	chr7	+	3965	6	FSM	ENSMUSG00000091474.3	ENSMUST00000163475.3	4004	6	32	7	32	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTACCTTGGGGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	41248716	41277950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_41248825_41261099_41261350_41261794_41261922_41262579_41262676_41274146_41274257_41274676
ENSMUSG00000091475.5_0	chr17	+	1782	2	FSM	ENSMUSG00000091475.5	ENSMUST00000163493.4	1802	2	19	1	19	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTCCCTTGAATGTGG	NA	NA	NA	NA	NA	NA	NA	NA	25789350	25794016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_25790076_25792959
ENSMUSG00000091476.9_1	chr1	+	3415	23	FSM	ENSMUSG00000091476.9	ENSMUST00000238506.2	3426	23	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTCATCTGTTTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	177819006	178000264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_177819151_177830560_177830610_177842693_177842768_177843480_177843551_177845242_177845308_177867874_177867900_177874485_177874564_177905020_177905099_177924155_177924263_177925949_177926443_177931189_177931668_177938713_177939169_177940679_177940739_177943763_177943840_177950325_177950379_177967942_177967994_177968974_177969009_177969076_177969157_177976448_177976549_177982027_177982115_177984209_177984368_177997399_177997454_177999717
ENSMUSG00000091478.3_0	chr11	-	501	1	FSM	ENSMUSG00000091478.3	ENSMUST00000081241.2	411	1	14	-104	14	104	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTCTAAACCATGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	100252938	100252437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100252400_100252900
ENSMUSG00000091478.3_1	chr11	-	437	2	Genic_Genomic	ENSMUSG00000091478.3	novel	411	1	NA	NA	-25	79	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTAAACAACAACAACAACA	NA	NA	NA	NA	NA	NA	NA	NA	100252977	100252462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr11_-_100252836_100252913
ENSMUSG00000091512.6_0	chr3	+	1281	7	FSM	ENSMUSG00000091512.6	ENSMUST00000168345.6	1295	7	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAATGAGCTCTGTATAG	NA	NA	NA	NA	NA	NA	NA	NA	137624296	137634522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_137624425_137624633_137624680_137625681_137625717_137630872_137630932_137632569_137632704_137633107_137633172_137633707
ENSMUSG00000091519.2_0	chr18	+	826	2	FSM	ENSMUSG00000091519.2	ENST00000400404.1	847	2	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	700	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATCAGGTAGGCTGGGA	NA	NA	NA	NA	NA	NA	NA	NA	76946290	76950395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_76947054_76950332
ENSMUSG00000091537.3_0	chr9	-	934	4	FSM	ENSMUSG00000091537.3	ENSMUST00000167504.3	944	4	9	1	9	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	2458	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGGGGTTGCCATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	108911646	108906955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_108907494_108911069_108911158_108911238_108911295_108911394
ENSMUSG00000091575.3_0	chr3	-	1377	1	FSM	ENSMUSG00000091575.3	ENSMUST00000164330.2	1425	1	42	6	42	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTCAGAGAGTGGGATTA	NA	NA	NA	NA	NA	NA	NA	NA	106390711	106389334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_106389300_106390700
ENSMUSG00000091577.3_0	chr13	-	4267	1	FSM	ENSMUSG00000091577.3	ENSMUST00000147973.3	4275	1	1	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCTGTCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	103300576	103296309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_103296300_103300600
ENSMUSG00000091586.3_0	chr17	+	2909	13	FSM	ENSMUSG00000091586.3	ENSMUST00000237003.2	2940	13	24	7	24	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTTTAAAAGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32725047	32749110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_32725139_32725867_32726067_32736867_32737013_32739336_32739391_32739476_32739605_32741091_32741214_32742975_32743247_32743552_32743620_32743808_32743939_32746814_32746949_32747020_32747086_32747249_32747333_32747690
ENSMUSG00000091587.2_0	chr12	-	403	2	FSM	ENSMUSG00000091587.2	ENSMUST00000165200.2	417	2	10	4	10	-4	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAACACTTCATGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	81580122	81578812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81579091_81579997
ENSMUSG00000091614.3_3	chr17	-	992	2	FSM	ENSMUSG00000079580.10	ENST00000652218.1	1007	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACGGCTACACGCTCTA	NA	NA	NA	NA	NA	NA	NA	NA	29745720	29738341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_29738793_29745179
ENSMUSG00000091625.9_0	chr6	-	417	4	ISM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	1288	2	1279	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	56680389	56678049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298
ENSMUSG00000091625.9_1	chr6	-	492	5	FSM	ENSMUSG00000091625.9	ENSMUST00000170382.5	494	5	0	2	0	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGATTTGATTTATTA	NA	NA	NA	NA	NA	NA	NA	NA	56681677	56678049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_56678275_56679080_56679154_56679990_56680019_56680298_56680395_56681607
ENSMUSG00000091635.3_0	chr5	-	5687	6	FSM	ENSMUSG00000091635.3	ENSMUST00000053253.10	5716	6	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTCCAATGCTATACCAAA	NA	NA	NA	NA	NA	NA	NA	NA	109340043	109300812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_109304794_109305940_109306065_109319466_109319692_109321408_109322213_109322804_109323088_109339773
ENSMUSG00000091705.9_0	chr17	+	1237	7	FSM	ENSMUSG00000091705.9	ENSMUST00000074806.12	1262	7	25	0	25	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGGATGTTGTCTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	35561242	35564770	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35561373_35561575_35561846_35562088_35562365_35563730_35564007_35564133_35564251_35564429_35564463_35564635
ENSMUSG00000091764.4_0	chr8	+	4312	4	FSM	ENSMUSG00000091764.4	ENSMUST00000204285.3	4333	4	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATGAGTTTTTTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	70107156	70119626	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_70107247_70111912_70112040_70112223_70112285_70115592
ENSMUSG00000091803.8_0	chr12	-	648	4	FSM	ENSMUSG00000091803.8	ENSMUST00000110340.9	668	4	8	12	8	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAAAAATGTTATGATGT	NA	NA	NA	NA	NA	NA	NA	NA	81531876	81405811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81406119_81521360_81521424_81527704_81527777_81531670
ENSMUSG00000091803.8_1	chr12	-	1986	4	FSM	ENSMUSG00000091803.8	ENSMUST00000002757.11	2007	4	8	13	1	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGACAAAACAAGAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81531886	81517490	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81519126_81521360_81521424_81527704_81527777_81531670
ENSMUSG00000091803.8_2	chr12	-	412	4	FSM	ENSMUSG00000091803.8	ENSMUST00000168463.8	431	4	3	16	0	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCAAGTATAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	81531884	81518882	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_81518946_81521360_81521424_81527704_81527777_81531670
ENSMUSG00000091811.3_0	chr7	-	1589	1	FSM	ENSMUSG00000091811.3	ENSMUST00000169612.3	1605	1	8	8	8	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGAACAGCGTTGG	NA	NA	NA	NA	NA	NA	NA	NA	16007534	16005945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16005900_16007500
ENSMUSG00000091845.2_0	chr6	-	369	1	FSM	ENSMUSG00000091845.2	ENSMUST00000025040.6	390	1	6	15	6	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAAAAAAAAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	108117464	108117095	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_108117100_108117500
ENSMUSG00000091896.9_0	chr18	+	2466	7	FSM	ENSMUSG00000091896.9	ENSMUST00000170693.9	2480	7	7	7	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTTCACCTGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	35904617	35940214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35905066_35926517_35926582_35932893_35932926_35933004_35933083_35933162_35933269_35934326_35934421_35938570
ENSMUSG00000091898.9_0	chr14	+	719	6	FSM	ENSMUSG00000091898.9	ENSMUST00000169169.8	721	6	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30930270	30933686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_30930336_30931759_30931791_30932016_30932164_30932520_30932636_30933236_30933374_30933462
ENSMUSG00000091898.9_6	chr14	+	653	5	ISM	ENSMUSG00000091898.9	ENSMUST00000169169.8	721	6	1490	2	1490	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTTCCTGGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	30931758	30933684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_30931791_30932016_30932164_30932520_30932636_30933236_30933374_30933462
ENSMUSG00000091898.9_7	chr14	+	624	4	ISM	ENSMUSG00000091898.9	ENSMUST00000169169.8	721	6	1747	0	1747	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTTTCCTGGGGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	30932015	30933686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_30932164_30932520_30932636_30933236_30933374_30933462
ENSMUSG00000091900.4_0	chr7	-	862	2	FSM	ENSMUSG00000091900.4	ENST00000416748.1	877	2	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3779	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAAGGCCTCCACTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	115683782	115682707	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_115683220_115683432
ENSMUSG00000091931.6_0	chr12	-	1130	2	FSM	ENSMUSG00000091931.6	ENSMUST00000173969.2	1152	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTACATATTTTCTGTAG	NA	NA	NA	NA	NA	NA	NA	NA	102724043	102719539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102720426_102723799
ENSMUSG00000091931.6_1	chr12	-	522	2	FSM	ENSMUSG00000091931.6	ENSMUST00000179263.2	525	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACACTCCACTGTTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	102724062	102722542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_102722802_102723799
ENSMUSG00000091945.3_0	chr17	-	8226	6	FSM	ENSMUSG00000091945.3	ENSMUST00000168033.3	8228	6	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	23531402	23504367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_23510828_23515838_23515963_23527003_23527232_23528801_23529612_23529916_23530209_23531090
ENSMUSG00000091955.3_0	chr7	+	458	1	FSM	ENSMUSG00000091955.3	ENSMUST00000170837.3	485	1	7	20	7	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24561644	24562102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_24561600_24562100
ENSMUSG00000091957.4_1	chr18	-	923	1	FSM	ENSMUSG00000091957.4	ENSMUST00000170335.4	965	1	10	32	-1	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	40099	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	61393033	61392110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61392100_61393000
ENSMUSG00000091971.4_0	chr17	-	2933	1	FSM	ENSMUSG00000091971.4	ENSMUST00000087328.4	2967	1	22	12	22	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAAATAAAAACCCTGCCC	NA	NA	NA	NA	NA	NA	NA	NA	35191110	35188177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35188200_35191100
ENSMUSG00000091985.2_1	chr4	-	3021	2	FSM	ENSMUSG00000091985.2	ENSMUST00000170933.2	3039	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCCTCGAGTTCTCCCA	NA	NA	NA	NA	NA	NA	NA	NA	108494626	108491045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_108492287_108492846
ENSMUSG00000091994.3_0	chr10	-	3255	2	FSM	ENSMUSG00000091994.3	ENSMUST00000168521.2	3265	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACACCCTCCTGCTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79690785	79687219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79690346_79690656
ENSMUSG00000092009.2_1	chr16	+	5765	39	FSM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	4	14	4	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGGTACAATCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	48877842	49017245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_48877934_48881844_48881952_48885318_48885463_48889746_48889908_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313_48997440_49003198_49003370_49007357_49007463_49015857_49015954_49017118
ENSMUSG00000092009.2_11	chr16	+	5675	38	ISM	ENSMUSG00000092009.2	ENST00000273353.4	5783	39	4005	14	3995	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGGTACAATCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	48881843	49017245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_48881952_48885318_48885463_48889746_48889908_48891369_48891497_48898991_48899085_48901533_48901598_48901680_48901777_48911437_48911542_48913016_48913156_48916792_48916912_48920442_48920593_48921835_48922007_48929626_48929804_48930755_48930889_48933427_48933496_48934363_48934452_48936573_48936692_48937535_48937660_48940310_48940448_48952327_48952584_48957836_48958080_48959024_48959202_48961744_48961891_48963278_48963370_48965405_48965796_48973430_48973558_48973817_48973932_48975878_48976076_48980021_48980372_48983378_48983504_48986148_48986265_48992260_48992454_48993292_48993497_48997313_48997440_49003198_49003370_49007357_49007463_49015857_49015954_49017118
ENSMUSG00000092035.9_0	chr6	+	2499	4	NNC	ENSMUSG00000092035.9	novel	2510	4	NA	NA	0	-10	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCACCACCACCTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	4747366	4757194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_4747588_4754123_4754456_4754515_4755803_4756535
ENSMUSG00000092035.9_1	chr6	+	2498	4	FSM	ENSMUSG00000092035.9	ENST00000612748.1	2510	4	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCACCTCCACCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	4747374	4757200	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_4747588_4754123_4754456_4754515_4755804_4756535
ENSMUSG00000092060.5_0	chr5	-	1272	5	FSM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACTTAGAGTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67584904	67555511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798_67575366_67584811
ENSMUSG00000092060.5_1	chr5	-	1180	4	ISM	ENSMUSG00000092060.5	ENST00000611697.1	1288	5	9547	7	9547	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCACTTAGAGTCCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67575366	67555511	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_67555794_67557403_67557645_67562773_67562863_67574798
ENSMUSG00000092072.4_0	chr3	+	365	1	FSM	ENSMUSG00000092072.4	ENSMUST00000170669.4	429	1	26	38	26	-38	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATACAAAAAAATAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	105942005	105942370	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105942000_105942400
ENSMUSG00000092074.3_0	chr17	-	631	6	FSM	ENSMUSG00000092074.3	ENSMUST00000232499.2	640	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTAATACAGTTGTATT	NA	NA	NA	NA	NA	NA	NA	NA	6367693	6356630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_6356874_6358912_6359012_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUSG00000092074.3_2	chr17	-	583	5	ISM	ENSMUSG00000092074.3	ENSMUST00000232499.2	640	6	2469	3	2469	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAGTTGTATTTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	6365224	6356624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_6356874_6358912_6359012_6361567_6361646_6361983_6362108_6365191
ENSMUSG00000092074.3_6	chr17	-	3310	5	FSM	ENSMUSG00000092074.3	ENSMUST00000169415.3	3321	5	11	0	11	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	6367764	6358268	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_6361219_6361567_6361646_6361983_6362108_6365191_6365234_6367648
ENSMUSG00000092118.2_0	chr7	-	1673	1	FSM	ENSMUSG00000092118.2	ENSMUST00000169357.2	1691	1	12	6	12	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTTGTTCTTTGTA	NA	NA	NA	NA	NA	NA	NA	NA	51512003	51510330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_51510300_51512000
ENSMUSG00000092124.2_0	chr18	+	1213	1	FSM	ENSMUSG00000092124.2	ENSMUST00000164667.2	1240	1	27	0	27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACTAGGCTCTCCGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	31742591	31743804	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_31742600_31743800
ENSMUSG00000092130.3_0	chr12	+	3970	1	FSM	ENSMUSG00000092130.3	ENSMUST00000220643.2	3987	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	139	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGTCTGACTTCCCTAGC	NA	NA	NA	NA	NA	NA	NA	NA	84922552	84926522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84922600_84926500
ENSMUSG00000092134.2_0	chr6	-	1371	4	FSM	ENSMUSG00000092134.2	ENSMUST00000171098.2	1394	4	11	12	11	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAATAAAGAGGACAAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	134220663	134210132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_134210958_134216081_134216146_134218821_134218930_134220289
ENSMUSG00000092162.4_0	chr10	-	7332	6	FSM	ENSMUSG00000092162.4	ENSMUST00000170257.4	7340	6	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACTCCAGAAGAGGGAG	NA	NA	NA	NA	NA	NA	NA	NA	130291914	130277433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_130282973_130284447_130284572_130285655_130285881_130288206_130289011_130289404_130289688_130291557
ENSMUSG00000092171.2_0	chr17	+	1448	3	FSM	ENSMUSG00000092171.2	ENSMUST00000172874.2	1475	3	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAGTAAACACTTACCAT	NA	NA	NA	NA	NA	NA	NA	NA	36083357	36091568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36083804_36087767_36088116_36090914
ENSMUSG00000092178.3_0	chr7	-	2538	5	FSM	ENSMUSG00000092178.3	ENSMUST00000210683.2	2545	5	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGTTGGTTTGTCTCAC	NA	NA	NA	NA	NA	NA	NA	NA	9610889	9602809	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_9604820_9605989_9606077_9606845_9606972_9608117_9608157_9610613
ENSMUSG00000092183.2_0	chr5	-	1221	1	FSM	ENSMUSG00000092183.2	ENSMUST00000173208.2	1247	1	23	3	23	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACAAGGTTTTGCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	114913021	114911800	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_114911800_114913000
ENSMUSG00000092192.8_0	chr9	+	1954	9	FSM	ENSMUSG00000092192.8	ENSMUST00000034734.9	1975	9	0	21	0	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAACAACAGAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	72866066	72880325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72866280_72867863_72868012_72868539_72868674_72869196_72869423_72871372_72871519_72872450_72872561_72876313_72876468_72879254_72879361_72879608
ENSMUSG00000092203.8_0	chr17	-	490	4	FSM	ENSMUSG00000092203.8	ENSMUST00000174714.8	520	4	23	7	23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTTAAATAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35171401	35169223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35169452_35169673_35169824_35171111_35171150_35171327
ENSMUSG00000092203.8_1	chr17	-	420	4	FSM	ENSMUSG00000092203.8	ENSMUST00000173070.8	434	4	7	7	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTACTTAAATAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	35171440	35169223	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35169452_35170860_35170902_35171111_35171150_35171327
ENSMUSG00000092203.8_2	chr17	-	563	5	FSM	ENSMUSG00000092203.8	ENSMUST00000172501.8	579	5	10	6	-10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGTACTTAAATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	35171434	35169224	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_35169452_35169673_35169824_35170860_35170902_35171111_35171150_35171327
ENSMUSG00000092212.4_0	chr9	-	1416	6	FSM	ENSMUSG00000092212.4	ENSMUST00000173185.2	1458	6	34	8	34	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGAGACCAGAGTTGTAC	NA	NA	NA	NA	NA	NA	NA	NA	119060724	119049561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_119049990_119050186_119050403_119051512_119051622_119051804_119052020_119059637_119059742_119060380
ENSMUSG00000092223.2_0	chr17	+	657	1	FSM	ENSMUSG00000092223.2	ENSMUST00000173971.2	667	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACATAGAGCCCCCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	37441805	37442462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37441800_37442500
ENSMUSG00000092232.2_0	chr14	+	1208	9	FSM	ENSMUSG00000092232.2	ENSMUST00000134077.2	1245	9	0	37	0	-37	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGGAAAAAAAAAAGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	55120897	55135557	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55120964_55121253_55121342_55121830_55122271_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000092232.2_1	chr14	+	3794	2	ISM	ENSMUSG00000089682.11	ENSMUST00000133397.4	3813	3	294	15	294	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAAGAAAAAGCTCT	NA	NA	NA	NA	NA	NA	NA	NA	55121254	55125537	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55121342_55121830
ENSMUSG00000092232.2_2	chr14	+	1138	8	ISM	ENSMUSG00000092232.2	ENSMUST00000134077.2	1245	9	356	41	356	-41	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAGGAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55121253	55135553	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55121342_55121830_55122271_55132304_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000092232.2_3	chr14	+	620	6	ISM	ENSMUSG00000022194.16	ENSMUST00000172557.2	700	7	228	30	228	8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55132302	55135561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_55132420_55133085_55133154_55133273_55133381_55134408_55134497_55134577_55134730_55135473
ENSMUSG00000092239.2_0	chr17	+	644	3	FSM	ENSMUSG00000092239.2	ENSMUST00000174380.2	656	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAAAATTGCAAACGCCC	NA	NA	NA	NA	NA	NA	NA	NA	37234683	37244312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_37234741_37236244_37236354_37243834
ENSMUSG00000092239.2_1	chr17	+	574	2	ISM	ENSMUSG00000092239.2	ENSMUST00000174380.2	656	3	1559	27	1559	-27	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCTA	NA	NA	NA	NA	NA	NA	NA	NA	37236242	37244297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_37236354_37243834
ENSMUSG00000092260.8_0	chr8	-	2274	4	FSM	ENSMUSG00000092260.8	ENSMUST00000130458.8	2291	4	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATACAGACAATTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	70202605	70194298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70196261_70196841_70196903_70197110_70197238_70202481
ENSMUSG00000092274.4_0	chr19	-	20741	1	FSM	ENSMUSG00000092274.4	ENSMUST00000173672.2	20771	1	13	17	11	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	726	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGGAAAAAGCAAAAGGC	NA	NA	NA	NA	NA	NA	NA	NA	5895493	5874752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5874800_5895500
ENSMUSG00000092274.4_1	chr19	-	857	2	FSM	ENSMUSG00000092274.4	ENSMUST00000174287.2	3004	2	467	1680	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGTCTGCGCAGCGTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	5895037	5894014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5894787_5894952
ENSMUSG00000092341.4_2	chr19	-	6971	1	FSM	ENSMUSG00000092341.4	ENSMUST00000172812.3	6983	1	11	1	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20882	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGTGCTTCTTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	5852689	5845718	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5845700_5852700
ENSMUSG00000092341.4_4	chr19	-	465	2	FSM	ENSMUSG00000092341.4	ENSMUST00000173499.2	485	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAGACGAAGAAGACATA	NA	NA	NA	NA	NA	NA	NA	NA	5852689	5851953	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5851995_5852265
ENSMUSG00000092345.2_0	chr4	+	1268	3	FSM	ENSMUSG00000092345.2	ENSMUST00000174664.2	1294	3	17	9	17	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCATCATTTTCCATGAC	NA	NA	NA	NA	NA	NA	NA	NA	59003226	59041879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_59003558_59039226_59039359_59041074
ENSMUSG00000092360.2_0	chr10	-	529	2	FSM	ENSMUSG00000001666.9	ENSMUST00000172820.2	574	2	32	13	32	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCATTCAAACATGACT	NA	NA	NA	NA	NA	NA	NA	NA	75608836	75607076	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_75607341_75608571
ENSMUSG00000092368.2_0	chr17	+	1097	2	FSM	ENSMUSG00000092368.2	ENSMUST00000173900.2	1111	2	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAACCCTATCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	36305354	36349323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_36305453_36348324
ENSMUSG00000092368.2_1	chr17	+	1000	1	NIC	ENSMUSG00000092368.2	novel	1111	2	NA	NA	42979	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAAACCCTATCTCTATT	NA	NA	NA	NA	NA	NA	NA	NA	36348323	36349323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_+_36348300_36349300
ENSMUSG00000092416.3_0	chr7	-	4040	7	FSM	ENSMUSG00000092416.3	ENSMUST00000174407.3	4069	7	23	6	23	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTACGTTTACTTACTGC	NA	NA	NA	NA	NA	NA	NA	NA	42155127	42122815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_42126108_42126528_42126639_42137893_42137975_42138858_42138986_42139432_42139701_42150781_42150850_42155033
ENSMUSG00000092417.4_0	chr17	+	1505	3	FSM	ENSMUSG00000092417.4	ENSMUST00000165306.3	1518	3	13	0	13	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	390	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTTTACTTTCTTGAA	NA	NA	NA	NA	NA	NA	NA	NA	35340471	35343790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_35340775_35342028_35342636_35343195
ENSMUSG00000092471.2_0	chr17	-	1701	9	FSM	ENSMUSG00000092471.2	ENST00000435122.3	1722	9	10	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGAGTCAAGACAGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	34941219	34938477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34939065_34939148_34939253_34939320_34939491_34939709_34939911_34940024_34940112_34940199_34940302_34940381_34940484_34940585_34940724_34941009
ENSMUSG00000092490.8_1	chr7	-	1612	6	FSM	ENSMUSG00000092490.8	ENSMUST00000172746.8	1644	6	27	5	27	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGAGTTACCTTTTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	8865823	8858850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_8859771_8860940_8861028_8861801_8861928_8863073_8863113_8865069_8865260_8865573
ENSMUSG00000092534.9_0	chr7	-	1415	3	FSM	ENSMUSG00000030680.7	ENSMUST00000200948.2	1430	3	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCCAGCACTCAGGAGGC	NA	NA	NA	NA	NA	NA	NA	NA	126616516	126614211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_126614642_126615371_126615455_126615614
ENSMUSG00000092544.9_0	chr8	-	3222	4	FSM	ENSMUSG00000043090.19	ENSMUST00000137573.2	3245	4	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAAACAAAAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	70227538	70216492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_70219428_70220282_70220344_70221770_70221898_70227439
ENSMUSG00000092558.4_0	chr17	+	2037	4	FSM	ENSMUSG00000092558.4	ENSMUST00000024778.3	2054	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTTAGCTGTAGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	47922517	47935337	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47922618_47923887_47924043_47929733_47929988_47933809
ENSMUSG00000092558.4_6	chr17	+	411	2	FSM	ENSMUSG00000092558.4	ENST00000409060.1	425	2	12	2	12	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGACAAGCAGGATATGCT	NA	NA	NA	NA	NA	NA	NA	NA	47923898	47930001	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47924047_47929738
ENSMUSG00000092558.4_7	chr17	+	822	3	FSM	ENSMUSG00000092558.4	ENST00000265350.9	843	3	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATGGAAAAGCTGTAGGG	NA	NA	NA	NA	NA	NA	NA	NA	47923895	47934231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_47924047_47929738_47929988_47933809
ENSMUSG00000092595.3_0	chr17	-	3673	10	ISM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	323	0	323	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34250231	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539
ENSMUSG00000092595.3_1	chr17	-	3711	11	FSM	ENSMUSG00000092595.3	ENSMUST00000168978.3	3711	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCGGTTCTTCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	34250554	34245007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34245200_34245369_34245445_34245636_34245680_34245824_34246076_34246176_34248043_34248483_34248681_34248819_34248958_34249063_34249229_34249341_34249396_34249539_34250237_34250521
ENSMUSG00000092607.10_0	chr3	-	1035	7	FSM	ENSMUSG00000092607.10	ENSMUST00000172572.9	1054	7	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGAGGTCGCTGCCCTT	NA	NA	NA	NA	NA	NA	NA	NA	95041308	95036851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95037195_95037474_95037670_95040135_95040225_95040327_95040423_95040510_95040600_95040868_95040940_95041155
ENSMUSG00000093424.4_0	chr3	-	759	2	FSM	ENSMUSG00000093424.4	ENSMUST00000098867.4	784	2	20	5	20	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGGCAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	95222408	95214987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_95215452_95222113
ENSMUSG00000093483.2_0	chr11	+	369	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177150.2	383	3	6	8	6	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACCATGGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	83182530	83185449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83182660_83182792_83182924_83185340
ENSMUSG00000093483.2_6	chr11	+	302	3	FSM	ENSMUSG00000093483.2	ENSMUST00000177533.2	308	3	0	6	0	-6	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAACCATGGTATTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	83182567	83185449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_83182660_83182792_83182894_83185340
ENSMUSG00000093553.2_0	chr3	-	2817	1	FSM	ENSMUSG00000093553.2	ENSMUST00000176742.2	2831	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAAGTTGATAATGACAT	NA	NA	NA	NA	NA	NA	NA	NA	96153688	96150871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96150900_96153700
ENSMUSG00000093575.2_0	chr16	+	677	5	FSM	ENSMUSG00000005982.15	ENST00000572942.5	690	5	3	10	3	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCAGAATATATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	3702586	3719959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3702671_3712232_3712349_3715114_3715245_3717735_3717833_3719709
ENSMUSG00000093575.2_1	chr16	+	593	4	ISM	ENSMUSG00000005982.15	ENST00000572942.5	690	5	9649	10	-6	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCAGAATATATACTGG	NA	NA	NA	NA	NA	NA	NA	NA	3712232	3719959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_3712349_3715114_3715245_3717735_3717833_3719709
ENSMUSG00000093577.2_0	chr3	+	2420	1	FSM	ENSMUSG00000093577.2	ENSMUST00000176760.2	2427	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTATAACATTGACTCTT	NA	NA	NA	NA	NA	NA	NA	NA	96146708	96149128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_96146700_96149100
ENSMUSG00000093579.2_0	chr12	+	819	2	FSM	ENSMUSG00000093579.2	ENSMUST00000177547.2	844	2	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCCTGTATTCACACAGC	NA	NA	NA	NA	NA	NA	NA	NA	101879516	101881587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_101879602_101880853
ENSMUSG00000093594.2_0	chr4	-	2498	4	FSM	ENSMUSG00000093594.2	ENSMUST00000176201.2	2516	4	10	8	10	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCCAATGTAGACTGT	NA	NA	NA	NA	NA	NA	NA	NA	147894287	147866783	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147868955_147880114_147880185_147891546_147891641_147894124
ENSMUSG00000093617.2_0	chr4	-	1656	3	FSM	ENSMUSG00000093617.2	ENSMUST00000175787.2	1693	3	23	14	23	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATATAACCATGATAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	147152870	147147836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_147149356_147152138_147152205_147152799
ENSMUSG00000093656.2_0	chr3	-	3199	1	FSM	ENSMUSG00000093656.2	ENSMUST00000177363.2	3215	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCTACTTCCCCCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	96177596	96174397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96174400_96177600
ENSMUSG00000093661.2_0	chr6	-	2574	9	FSM	ENSMUSG00000093661.2	ENST00000295612.7	2593	9	12	7	12	4	multi-exon	TRUE	canonical	NA	NA	NA	NA	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTCATGTTAATGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	99669223	99602091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_99603669_99603747_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99646383_99646529_99669090
ENSMUSG00000093661.2_7	chr6	-	2488	7	FSM	ENSMUSG00000093661.2	ENSMUST00000032151.3	2515	7	8	19	8	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAATAAATAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	99643724	99602114	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_99604015_99609217_99609374_99613069_99613137_99616123_99616185_99617576_99617672_99628679_99628753_99643588
ENSMUSG00000093674.8_0	chr10	-	561	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176010.8	582	4	11	10	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	40883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCAAACTGCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	128385163	128383992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128384299_128384526_128384550_128384817_128384843_128384956
ENSMUSG00000093674.8_1	chr10	-	520	3	FSM	ENSMUSG00000093674.8	ENSMUST00000177163.8	544	3	14	10	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCAAACTGCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	128385008	128383992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128384299_128384526_128384550_128384817
ENSMUSG00000093674.8_2	chr10	-	423	4	FSM	ENSMUSG00000093674.8	ENSMUST00000176683.8	437	4	4	10	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAATCAAACTGCTGTTAC	NA	NA	NA	NA	NA	NA	NA	NA	128385027	128383992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_128384299_128384526_128384550_128384817_128384841_128384956
ENSMUSG00000093752.2_0	chr2	-	5267	12	FSM	ENSMUSG00000093752.2	ENSMUST00000138667.2	5288	12	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAATATTTGCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	168072271	168022913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168027093_168029486_168029580_168031201_168031315_168052350_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000093752.2_1	chr2	-	2270	9	FSM	ENSMUSG00000078919.11	ENSMUST00000154111.8	2293	9	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAGGACTATAATGTTAT	NA	NA	NA	NA	NA	NA	NA	NA	168072284	168050975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168052557_168053285_168053401_168054879_168054949_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322_168069423_168072112
ENSMUSG00000093752.2_4	chr2	-	632	7	FSM	ENSMUSG00000078919.11	ENST00000683466.1	642	7	8	2	8	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATGAGCCAAAGGTAA	NA	NA	NA	NA	NA	NA	NA	NA	168069416	168052366	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_168052557_168053285_168053401_168059600_168059697_168061139_168061166_168061956_168062034_168065040_168065075_168069322
ENSMUSG00000093798.3_0	chr10	-	1930	1	FSM	ENSMUSG00000093798.3	ENSMUST00000177767.3	1941	1	0	11	0	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGGATTAAGTCAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	14623046	14621116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_14621100_14623000
ENSMUSG00000093803.6_0	chr9	+	3990	11	FSM	ENSMUSG00000093803.6	ENSMUST00000239563.2	4016	11	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATGAACAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	124195836	124204743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_124196070_124197152_124197355_124197930_124198032_124198703_124198779_124199151_124199239_124199674_124199836_124200422_124200507_124200880_124201057_124201276_124201402_124201794_124201908_124202110
ENSMUSG00000093803.6_1	chr9	+	4000	11	NNC	ENSMUSG00000093803.6	novel	4016	11	NA	NA	2	-16	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAACATGAACAAACCTT	NA	NA	NA	NA	NA	NA	NA	NA	124195828	124204743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_124196070_124197152_124197355_124197928_124198032_124198703_124198779_124199151_124199239_124199674_124199836_124200422_124200507_124200880_124201057_124201276_124201402_124201794_124201908_124202110
ENSMUSG00000093846.2_0	chr12	-	2844	5	FSM	ENSMUSG00000093846.2	ENSMUST00000172838.3	2857	5	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	22206642	22165764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_22167822_22173353_22173543_22180145_22180207_22180406_22180534_22206232
ENSMUSG00000093847.3_0	chr12	-	1818	2	FSM	ENSMUSG00000093847.3	ENSMUST00000218054.3	1856	2	25	13	25	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAAAATATCAATGC	NA	NA	NA	NA	NA	NA	NA	NA	88290771	88286904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_88288562_88290610
ENSMUSG00000093885.3_0	chr5	+	422	1	FSM	ENSMUSG00000093885.3	ENSMUST00000137013.2	333	1	-48	-41	-48	41	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	33233333	33233755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33233300_33233800
ENSMUSG00000093904.3_0	chr8	-	4883	5	FSM	ENSMUSG00000093904.3	ENSMUST00000179857.3	4902	5	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTGATAATTTGTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	127672579	127657424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_127661810_127663789_127663933_127666621_127666704_127667928_127667976_127672353
ENSMUSG00000093930.3_0	chr13	+	3233	10	FSM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAATATTTCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120151984	120169609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_120152050_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_12	chr13	+	3410	10	ISM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	4529	0	4529	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTATGCCTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	120156528	120169796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_17	chr13	+	3167	9	ISM	ENSMUSG00000093930.3	ENSMUST00000179869.3	3245	10	9219	9	9201	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAAATATTTCAGCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	120161200	120169609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093930.3_5	chr13	+	3464	11	FSM	ENSMUSG00000093930.3	ENSMUST00000224188.2	3464	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTTATGCCTGTTAAT	NA	NA	NA	NA	NA	NA	NA	NA	120151999	120169796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_120152050_120156524_120156584_120161199_120161658_120162043_120162170_120162611_120162777_120164070_120164237_120165055_120165227_120165960_120166068_120166592_120166719_120166883_120167048_120167924
ENSMUSG00000093942.4_0	chr7	+	7737	3	FSM	ENSMUSG00000093942.4	ENSMUST00000214180.2	7750	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCCCCTAAAGAAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	140181187	140197584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_140181351_140185495_140185551_140190065
ENSMUSG00000093989.2_0	chr11	-	601	3	FSM	ENSMUSG00000093989.2	ENSMUST00000040428.4	611	3	8	2	8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTGCTGTCTGTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	70130660	70128951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_70129297_70129763_70129841_70130481
ENSMUSG00000094002.4_0	chr12	-	559	2	FSM	ENSMUSG00000094002.4	ENST00000431182.2	577	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGTGGAGTTCAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	27188944	27185229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_27185262_27188417
ENSMUSG00000094002.4_1	chr12	-	522	1	ISM	ENSMUSG00000094002.4	ENSMUST00000182592.3	8487	2	21693	4339	16	2377	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGCCTTTTTCAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	27188939	27188417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_27188400_27188900
ENSMUSG00000094081.3_0	chrY	-	4599	2	FSM	ENSMUSG00000094081.3	ENSMUST00000185348.2	4605	2	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAATACGTGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	7638488	7632778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_-_7637255_7638365
ENSMUSG00000094103.3_0	chr12	+	3871	5	FSM	ENSMUSG00000094103.3	ENSMUST00000177978.3	3863	5	-44	36	-44	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55246332	55263917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55246572_55252464_55252639_55257516_55257584_55258966_55259065_55260624
ENSMUSG00000094103.3_3	chr12	+	786	4	NNC	ENSMUSG00000094103.3	novel	3863	5	NA	NA	11139	-2487	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATATGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55257515	55261466	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_55257584_55258966_55259065_55260624_55261005_55261226
ENSMUSG00000094111.3_0	chr18	-	286	1	FSM	ENSMUSG00000094111.3	ENSMUST00000179225.3	379	1	83	10	83	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTTCGGCTGACCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	10483382	10483096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_10483100_10483400
ENSMUSG00000094145.3_0	chr6	-	14317	6	FSM	ENSMUSG00000094145.3	ENSMUST00000172199.3	14366	6	44	5	44	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCAAACTTTGTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	123395031	123350476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_123363114_123370809_123370934_123373295_123373521_123381771_123382579_123393392_123393691_123394805
ENSMUSG00000094248.2_0	chr13	+	464	1	FSM	ENSMUSG00000094248.2	ENSMUST00000091745.6	480	1	-19	35	-19	-35	mono-exon	FALSE	NA	NA	NA	NA	NA	4021	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCCACAGTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	21994615	21995079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21994600_21995100
ENSMUSG00000094256.3_0	chr17	+	484	1	FSM	ENSMUSG00000094256.3	ENSMUST00000077420.5	515	1	25	6	25	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACCAGGGGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	83595999	83596483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_83596000_83596500
ENSMUSG00000094257.3_0	chr8	+	333	2	Genic_Genomic	ENSMUSG00000094257.3	novel	579	1	NA	NA	36	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTTAAATAAGTATTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	95131874	95132411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr8_+_95131909_95132112
ENSMUSG00000094314.4_0	chr10	+	909	1	FSM	ENSMUSG00000094314.4	ENSMUST00000186197.3	914	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAACGGGACCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100171537	100172446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100171500_100172400
ENSMUSG00000094347.3_0	chr10	+	3095	3	FSM	ENSMUSG00000094347.3	ENSMUST00000214064.2	3119	3	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCATTATACATCACCGTCA	NA	NA	NA	NA	NA	NA	NA	NA	129219968	129226060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_129220234_129221296_129221547_129223480
ENSMUSG00000094365.2_0	chr7	-	1767	10	FSM	ENSMUSG00000036733.17	ENSMUST00000042726.14	1784	10	10	7	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCATCCCTGACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30349732	30340432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362
ENSMUSG00000094365.2_1	chr7	-	3805	25	FSM	ENSMUSG00000094365.2	ENSMUST00000146232.2	3821	25	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	780	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCATCCCTGACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30364353	30340432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30340732_30340928_30343923_30344042_30344250_30344584_30345091_30345268_30345343_30345410_30346984_30347060_30347155_30347241_30349008_30349145_30349362_30349609_30353594_30353728_30356373_30356504_30356586_30356699_30357023_30357344_30357927_30358091_30358277_30358409_30358487_30359023_30359518_30359602_30359683_30359754_30361053_30361214_30361293_30361400_30362360_30362386_30362519_30362553_30362647_30362711_30364255
ENSMUSG00000094365.2_2	chr7	-	630	5	FSM	ENSMUSG00000036733.17	ENST00000586618.5	648	5	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCATCCCTGACTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	30349483	30340432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30340646_30340732_30340836_30347183_30347241_30349008_30349145_30349362
ENSMUSG00000094378.8_0	chrX	+	2018	7	FSM	ENSMUSG00000094378.8	ENSMUST00000101180.8	2029	7	1	10	1	-10	multi-exon	TRUE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTGTTATTTCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	148567469	148609680	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_148567561_148582582_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ENSMUSG00000094378.8_2	chrX	+	1930	6	ISM	ENSMUSG00000094378.8	ENSMUST00000112741.4	1953	7	9394	9	9394	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTTATTTCTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	148582580	148609681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_148582709_148583428_148583509_148587159_148588119_148601122_148601205_148602010_148602061_148609050
ENSMUSG00000094396.4_0	chr17	+	8124	6	FSM	ENSMUSG00000094396.4	ENSMUST00000176802.3	8140	6	7	9	7	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGATAATAAATAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	18269692	18299985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_18269967_18282194_18282490_18282823_18283616_18284268_18284485_18286765_18286890_18293562
ENSMUSG00000094441.3_0	chr17	-	3515	4	FSM	ENSMUSG00000094441.3	ENSMUST00000008830.10	3544	4	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTTAGTTTTTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	33474097	33458698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33461925_33462686_33462745_33462981_33463109_33473993
ENSMUSG00000094446.2_0	chr13	+	606	1	FSM	ENSMUSG00000094446.2	ENSMUST00000075962.9	483	1	-18	-105	-18	105	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGCAAGATCAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55233571	55234177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_55233600_55234200
ENSMUSG00000094475.8_1	chr2	+	4400	5	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3572	2786	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175432198	175448439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175432264_175435718_175435774_175442797_175442925_175443129_175443191_175444347
ENSMUSG00000094475.8_2	chr2	+	1594	4	NNC	ENSMUSG00000094475.8	novel	1497	4	NA	NA	-3603	-1208	intron_retention	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGGAGAGAAACACCAT	NA	NA	NA	NA	NA	NA	NA	NA	175432167	175444445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175432264_175435718_175435774_175442797_175442925_175443129
ENSMUSG00000094475.8_3	chr2	+	4323	4	FSM	ENSMUSG00000094475.8	ENSMUST00000178120.8	1497	4	-40	-2786	-40	2786	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175435730	175448439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175435774_175442797_175442925_175443129_175443191_175444347
ENSMUSG00000094483.3_0	chr11	-	8299	1	FSM	ENSMUSG00000094483.3	ENSMUST00000179343.3	8319	1	9	11	9	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	432	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAATGACAGTCTTGTGC	NA	NA	NA	NA	NA	NA	NA	NA	6425908	6417609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_6417600_6425900
ENSMUSG00000094497.2_0	chr1	+	460	1	FSM	ENSMUSG00000094497.2	ENSMUST00000178557.2	483	1	19	4	19	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAATGACTCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	43228334	43228794	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_43228300_43228800
ENSMUSG00000094500.3_0	chr8	-	656	2	FSM	ENSMUSG00000094500.3	ENST00000517349.2	674	2	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	835	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAATACAACTCGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	34237773	34232128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_34232635_34237623
ENSMUSG00000094707.3_0	chr19	-	1980	6	FSM	ENSMUSG00000094707.3	ENSMUST00000236698.2	1998	6	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATAGTATTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	35901959	35812624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_35814014_35818673_35818730_35819763_35819822_35865634_35865861_35900886_35900948_35901769
ENSMUSG00000094708.2_0	chr5	-	1196	1	FSM	ENSMUSG00000094708.2	ENSMUST00000180167.2	1002	1	-18	-176	-18	176	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	106011586	106010390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_106010400_106011600
ENSMUSG00000094724.9_0	chr17	+	1766	9	FSM	ENSMUSG00000094724.9	ENSMUST00000089119.13	1783	9	17	0	17	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	7246010	7266097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296
ENSMUSG00000094724.9_4	chr17	+	2434	10	FSM	ENSMUSG00000094724.9	ENSMUST00000179728.2	2448	10	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTACCAAAAAGAAACTG	NA	NA	NA	NA	NA	NA	NA	NA	7246311	7278690	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_7246498_7248506_7248568_7251537_7251591_7252454_7252513_7256120_7256192_7259079_7259194_7262027_7262074_7263832_7263908_7265296_7265533_7277156
ENSMUSG00000094747.4_0	chr2	-	15553	3	FSM	ENSMUSG00000094747.4	ENSMUST00000099604.6	15582	3	27	2	27	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCCTAAACCAGATTCATC	NA	NA	NA	NA	NA	NA	NA	NA	111779758	111760462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_111775821_111778244_111778332_111779650
ENSMUSG00000094772.3_0	chr13	+	1148	2	FSM	ENSMUSG00000094772.3	ENSMUST00000220540.2	1165	2	15	2	15	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGGGGGACTTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	4659673	4665022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_4659946_4664146
ENSMUSG00000094777.3_0	chr13	-	464	1	FSM	ENSMUSG00000094777.3	ENSMUST00000081342.7	482	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	4065	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATCCACAGTGTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	22017666	22017202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_22017200_22017700
ENSMUSG00000094840.6_0	chr5	-	1607	9	FSM	ENSMUSG00000094840.6	ENST00000379458.9	1619	9	8	4	8	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCCCGACAGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	137251527	137244975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137245053_137245134_137245315_137245828_137245992_137246539_137246606_137246842_137246992_137248719_137248779_137248885_137249002_137250614_137250804_137250919
ENSMUSG00000094840.6_1	chr5	-	1425	8	FSM	ENSMUSG00000094840.6	ENST00000483366.5	1439	8	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCCCGACAGGTACG	NA	NA	NA	NA	NA	NA	NA	NA	137251525	137244975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137245053_137245828_137245992_137246539_137246606_137246842_137246992_137248719_137248779_137248885_137249002_137250614_137250804_137250919
ENSMUSG00000094870.9_2	chr13	-	2924	7	ISM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	526	7	7	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTTATTTTATGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	120251816	120226729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684
ENSMUSG00000094870.9_3	chr13	-	2966	8	FSM	ENSMUSG00000094870.9	ENSMUST00000178271.3	2966	8	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTATGTGTATGGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	120252342	120226722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_120228563_120230241_120230373_120237302_120237526_120237627_120237986_120244307_120244453_120250395_120250498_120251684_120251824_120252314
ENSMUSG00000094870.9_4	chr13	-	936	3	FSM	ENSMUSG00000094870.9	ENST00000509931.5	964	3	12	16	12	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATAACAACCAC	NA	NA	NA	NA	NA	NA	NA	NA	120251811	120226826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_120227594_120250455_120250498_120251684
ENSMUSG00000094891.3_0	chr17	+	879	1	FSM	ENSMUSG00000094891.3	ENSMUST00000112168.4	948	1	44	25	11	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	795	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAACTCTATCCAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	33395433	33396312	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33395400_33396300
ENSMUSG00000094932.8_0	chr2	+	4398	5	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3578	2786	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	175529751	175545998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688_175540750_175541906
ENSMUSG00000094932.8_1	chr2	+	1444	4	NNC	ENSMUSG00000094932.8	novel	1497	4	NA	NA	-3611	1101	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTATAATCAGTGTAAG	NA	NA	NA	NA	NA	NA	NA	NA	175529718	175541854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_+_175529815_175533277_175533333_175540356_175540484_175540688
ENSMUSG00000094932.8_2	chr2	+	4325	4	FSM	ENSMUSG00000094932.8	ENSMUST00000178133.8	1497	4	-47	-2781	-47	2781	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCAACTTGCTTCTTGGT	NA	NA	NA	NA	NA	NA	NA	NA	175533282	175545993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_175533333_175540356_175540484_175540688_175540750_175541906
ENSMUSG00000094936.9_0	chr19	-	2589	4	FSM	ENSMUSG00000094936.9	ENSMUST00000180248.8	2610	4	10	11	9	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGATAAGAGCTGCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	4843919	4834331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843699
ENSMUSG00000094936.9_2	chr19	-	998	3	FSM	ENSMUSG00000094936.9	ENSMUST00000178615.8	1018	3	14	6	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGGTATGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4843865	4835186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4835596_4842425_4842849_4843699
ENSMUSG00000094936.9_3	chr19	-	1192	4	FSM	ENSMUSG00000094936.9	ENSMUST00000237760.2	1197	4	3	2	3	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGGTATGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4843905	4835186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4835596_4840184_4840339_4842425_4842849_4843699
ENSMUSG00000094936.9_4	chr19	-	1411	4	FSM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCCTCCCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4843888	4835334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4835596_4837388_4838071_4842425_4842849_4843843
ENSMUSG00000094936.9_5	chr19	-	1342	3	ISM	ENSMUSG00000094936.9	ENSMUST00000179189.9	1411	4	1064	0	1055	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCCTCCCTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	4842824	4835334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_4835596_4837388_4838071_4842425
ENSMUSG00000094942.8_0	chr13	-	2302	4	FSM	ENSMUSG00000094942.8	ENSMUST00000187656.7	2310	4	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTGTGTGTGGATCAG	NA	NA	NA	NA	NA	NA	NA	NA	62530986	62516144	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62518166_62519376_62519438_62519623_62519751_62530893
ENSMUSG00000094989.2_0	chr13	-	571	1	FSM	ENSMUSG00000094989.2	ENSMUST00000075549.8	579	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTGAGGAGGCCTCAGT	NA	NA	NA	NA	NA	NA	NA	NA	72603459	72602888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_72602900_72603500
ENSMUSG00000094991.3_0	chr14	+	810	5	FSM	ENSMUSG00000094991.3	ENSMUST00000186974.2	817	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGAGAGGGACCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	51548953	51554210	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51548994_51550289_51550426_51552906_51552999_51553315_51553638_51553990
ENSMUSG00000094991.3_1	chr14	+	740	4	ISM	ENSMUSG00000094991.3	ENSMUST00000186974.2	817	5	1359	14	1359	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATGTAAACGAGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	51550312	51554203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_51550426_51552906_51552999_51553315_51553638_51553990
ENSMUSG00000095042.2_0	chr4	-	1228	1	FSM	ENSMUSG00000095042.2	ENSMUST00000119266.2	1002	1	-50	-176	-50	176	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57372004	57370776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_57370800_57372000
ENSMUSG00000095098.3_0	chr19	-	4700	1	FSM	ENSMUSG00000095098.3	ENSMUST00000179549.3	4715	1	9	6	9	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	834	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCTGGCTAGAGTCATAT	NA	NA	NA	NA	NA	NA	NA	NA	5507913	5503213	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5503200_5507900
ENSMUSG00000095098.3_1	chr19	-	4153	2	FSM	ENSMUSG00000095098.3	ENSMUST00000236881.2	4165	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTATGCCTGGCTAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	5507526	5503218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5507213_5507367
ENSMUSG00000095101.3_0	chr4	+	1449	1	FSM	ENSMUSG00000095101.3	ENSMUST00000179725.3	1462	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGGAGGTTTCGAT	NA	NA	NA	NA	NA	NA	NA	NA	88717914	88719363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_88717900_88719400
ENSMUSG00000095115.3_0	chr7	-	6856	1	FSM	ENSMUSG00000095115.3	ENSMUST00000178344.3	6865	1	6	3	6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	138	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTCTGGACTATGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	118091192	118084336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_118084300_118091200
ENSMUSG00000095123.2_0	chr10	+	4834	1	FSM	ENSMUSG00000095123.2	ENSMUST00000178920.2	4838	1	3	1	3	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGCAGTCTTGTTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	4341589	4346423	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_4341600_4346400
ENSMUSG00000095180.11_0	chrX	+	874	6	FSM	ENSMUSG00000095180.11	ENSMUST00000184866.10	893	6	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATACAAATATCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	36891643	36897297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_36891707_36892583_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUSG00000095180.11_1	chrX	+	809	5	ISM	ENSMUSG00000095180.11	ENSMUST00000239523.1	868	6	263	14	263	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGATACAAATATCTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	36892585	36897297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_36892653_36893274_36893357_36893532_36893891_36894500_36894547_36897041
ENSMUSG00000095186.2_7	chr9	+	680	3	NNC	ENSMUSG00000095186.2	novel	681	5	NA	NA	1	0	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3023547	3025218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3023945_3024411_3024570_3025093
ENSMUSG00000095193.3_0	chr17	+	3067	4	FSM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	95172351	95185743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_95172441_95181413_95181541_95181729_95181791_95182953
ENSMUSG00000095193.3_1	chr17	+	2979	3	ISM	ENSMUSG00000095193.3	ENSMUST00000234295.2	3079	4	9067	6	9067	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTCGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	95181412	95185743	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_95181541_95181729_95181791_95182953
ENSMUSG00000095199.9_0	chr2	+	1257	3	FSM	ENSMUSG00000095199.9	ENSMUST00000238365.2	753	3	-45	-459	-19	459	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGATAATCACTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	176212773	176222109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176212909_176220781_176220909_176221114
ENSMUSG00000095199.9_1	chr2	+	807	4	FSM	ENSMUSG00000095199.9	ENSMUST00000238250.2	841	4	31	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGTTTGCCGAGAGCACA	NA	NA	NA	NA	NA	NA	NA	NA	176212823	176225575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_176212909_176220781_176220909_176221114_176221176_176225041
ENSMUSG00000095253.5_0	chr17	-	5985	4	FSM	ENSMUSG00000095253.5	ENSMUST00000202988.4	6012	4	21	6	-12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAAGACTACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	33049214	33034428	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33040074_33040751_33040813_33041047_33041175_33049062
ENSMUSG00000095304.10_0	chr14	-	1526	4	FSM	ENSMUSG00000095304.10	ENSMUST00000052286.16	1555	4	18	11	18	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATAACATCAGTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	25903506	25887940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_25888951_25889319_25889444_25891184_25891280_25903209
ENSMUSG00000095315.3_0	chr2	+	2129	4	FSM	ENSMUSG00000095315.3	ENSMUST00000238230.2	2159	4	8	22	8	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAAAGAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	150153358	150168910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_150153479_150165621_150165749_150165947_150166009_150167089
ENSMUSG00000095325.4_0	chr17	-	5324	4	FSM	ENSMUSG00000095325.4	ENSMUST00000228075.3	5337	4	4	9	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGACATTCTGTTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	33110612	33098201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_33103140_33104676_33104738_33104930_33105058_33110414
ENSMUSG00000095432.10_0	chr13	-	5273	4	FSM	ENSMUSG00000095432.10	ENSMUST00000181892.9	5293	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTGAGAACTGTAGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	67701929	67686759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67691030_67693442_67693539_67694743_67694871_67701149
ENSMUSG00000095463.9_0	chr14	+	3575	13	FSM	ENSMUSG00000095463.9	ENSMUST00000184973.8	3589	13	11	3	11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTGACGTCTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	69574633	69604716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_69574738_69584934_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594599_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ENSMUSG00000095463.9_11	chr14	+	1907	12	FSM	ENSMUSG00000095463.9	ENST00000417069.6	1916	12	8	1	8	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACACTGCGTCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	69584945	69603187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_69585044_69586521_69586720_69588151_69588358_69591850_69592002_69592842_69592947_69594161_69594222_69594443_69594575_69596270_69596438_69599087_69599413_69601016_69601103_69601771_69601934_69602968
ENSMUSG00000095474.3_0	chrX	+	845	3	FSM	ENSMUSG00000095474.3	ENSMUST00000238499.2	857	3	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAAACGTCTTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	122485984	122511859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_122486100_122491396_122491438_122511170
ENSMUSG00000095526.3_0	chr6	+	426	1	FSM	ENSMUSG00000095526.3	ENSMUST00000117571.2	333	1	-58	-35	-58	35	mono-exon	FALSE	NA	NA	NA	NA	NA	579	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48500393	48500819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48500400_48500800
ENSMUSG00000095538.2_0	chr7	-	1665	9	FSM	ENSMUSG00000095538.2	ENSMUST00000154724.2	1690	9	22	3	22	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGTGTTTCGGCCTCT	NA	NA	NA	NA	NA	NA	NA	NA	26880489	26867857	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_26868230_26872061_26872193_26872288_26872385_26873846_26874002_26874140_26874204_26875203_26875664_26879593_26879705_26880124_26880259_26880346
ENSMUSG00000095545.8_1	chr2	-	1212	3	FSM	ENSMUSG00000095545.8	ENSMUST00000131041.2	252	3	-30	-930	-30	930	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAGATAATCACTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	175495469	175486178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_175487174_175487379_175487507_175495379
ENSMUSG00000095545.8_2	chr2	-	656	2	ISM	ENSMUSG00000095545.8	ENSMUST00000131041.2	252	3	7936	-467	7936	467	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTACATCTCTATGAGGA	NA	NA	NA	NA	NA	NA	NA	NA	175487503	175486641	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_175487174_175487379
ENSMUSG00000095547.2_26	chr9	+	678	3	NNC	ENSMUSG00000095547.2	novel	681	5	NA	NA	0	-234	intron_retention	TRUE	canonical	NA	NA	NA	NA	1426	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3020154	3021359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3020319_3020785_3021175_3021234
ENSMUSG00000095547.2_27	chr9	+	672	3	NIC	ENSMUSG00000095547.2	novel	681	5	NA	NA	6	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	708	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3020160	3021593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3020319_3020785_3021175_3021468
ENSMUSG00000095547.2_70	chr9	+	609	3	NNC	ENSMUSG00000095547.2	novel	675	5	NA	NA	302	0	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	144	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3020456	3021593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3020552_3020785_3021175_3021468
ENSMUSG00000095562.9_0	chrX	+	1142	2	FSM	ENSMUSG00000095562.9	ENSMUST00000238482.2	1163	2	22	-1	22	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCCTGCGCCGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	168793012	168801793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_168794060_168801698
ENSMUSG00000095562.9_1	chrX	+	662	2	ISM	ENSMUSG00000095562.9	ENSMUST00000180251.9	597	3	704	-2	-218	1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAAGCCTGCGCCGACCGC	NA	NA	NA	NA	NA	NA	NA	NA	168793521	168801793	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrX_+_168794060_168801669
ENSMUSG00000095567.9_0	chr4	+	2783	19	FSM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	2	0	2	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACTCTCGGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	156320468	156332073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_156320528_156320611_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ENSMUSG00000095567.9_5	chr4	+	2722	18	ISM	ENSMUSG00000095567.9	ENSMUST00000179543.8	2785	19	147	0	147	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATACTCTCGGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	156320613	156332073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr4_+_156320783_156321799_156321975_156322056_156322186_156323638_156323760_156323846_156323938_156324550_156324627_156324713_156324825_156325056_156325171_156325769_156325959_156326117_156326258_156327022_156327135_156327966_156328081_156328496_156328599_156329623_156329768_156329886_156330001_156330287_156330424_156331133_156331221_156331475
ENSMUSG00000095595.3_0	chr12	+	3869	5	FSM	ENSMUSG00000095595.3	ENSMUST00000177768.3	3922	5	17	36	17	-36	multi-exon	FALSE	canonical	NA	NA	NA	NA	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	55171270	55188853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55171508_55177400_55177575_55182452_55182520_55183902_55184001_55185560
ENSMUSG00000095595.3_5	chr12	+	786	4	FSM	ENSMUSG00000095595.3	ENST00000280987.9	792	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCATATGGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	55182451	55186402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55182520_55183902_55184001_55185560_55185941_55186162
ENSMUSG00000095597.3_0	chrX	-	629	1	FSM	ENSMUSG00000095597.3	ENSMUST00000178147.3	651	1	14	8	14	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	542	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTCATAGTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	151693137	151692508	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_-_151692500_151693100
ENSMUSG00000095673.2_0	chr10	+	872	1	FSM	ENSMUSG00000095673.2	ENSMUST00000179735.2	914	1	37	5	37	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAACGGGACCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100202397	100203269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100202400_100203300
ENSMUSG00000095677.3_0	chr17	-	746	5	FSM	ENSMUSG00000095677.3	ENSMUST00000179554.3	771	5	12	13	12	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	1202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTAAAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	6923287	6916349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_6916737_6917085_6917164_6917501_6917626_6920709_6920752_6923172
ENSMUSG00000095690.3_0	chr19	-	337	2	Genic_Genomic	ENSMUSG00000095690.3	novel	654	1	NA	NA	-27	-147	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATCTACCGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	7376469	7375935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr19_-_7376207_7376403
ENSMUSG00000095690.3_1	chr19	-	258	1	FSM	ENSMUSG00000095690.3	ENSMUST00000178377.3	654	1	249	147	249	-147	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAATCTACCGTATTGT	NA	NA	NA	NA	NA	NA	NA	NA	7376193	7375935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7375900_7376200
ENSMUSG00000095845.4_0	chr8	-	328	2	FSM	ENSMUSG00000095845.4	ENSMUST00000177563.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTACTCTGGATACCAC	NA	NA	NA	NA	NA	NA	NA	NA	85794611	85794196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85794344_85794430
ENSMUSG00000095891.8_18	chr9	+	664	2	NNC	ENSMUSG00000095891.8	novel	681	4	NA	NA	17	0	intron_retention	TRUE	non_canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTCAAAGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3032101	3033289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3032641_3033164
ENSMUSG00000095891.8_5	chr9	+	669	2	NIC	ENSMUSG00000095891.8	novel	684	3	NA	NA	8	0	combination_of_known_splicesites	TRUE	canonical	NA	NA	NA	NA	265	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3025424	3026387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3025969_3026262
ENSMUSG00000095891.8_6	chr9	+	664	2	NNC	ENSMUSG00000095891.8	novel	684	3	NA	NA	8	-239	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCATATTCCATGTCCT	NA	NA	NA	NA	NA	NA	NA	NA	3025424	3026148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3025969_3026028
ENSMUSG00000095937.2_0	chr4	-	1216	1	FSM	ENSMUSG00000095937.2	ENSMUST00000119978.2	1002	1	-38	-176	-38	176	mono-exon	FALSE	NA	NA	NA	NA	NA	342	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91740944	91739728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_91739700_91740900
ENSMUSG00000095954.5_0	chr5	+	2784	3	FSM	ENSMUSG00000095954.5	ENSMUST00000180076.2	1446	3	-42	-1296	-42	853	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTCGGACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95021613	95026047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_95021943_95022607_95023199_95024183
ENSMUSG00000095959.3_0	chr14	-	3373	3	FSM	ENSMUSG00000095959.3	ENSMUST00000228217.2	3389	3	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCCGGTTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	80106602	80097962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_80100993_80105759_80105952_80106451
ENSMUSG00000095990.2_0	chr17	+	2673	4	FSM	ENSMUSG00000095990.2	ENSMUST00000147630.2	2684	4	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGTCACCTTCTAAGGGA	NA	NA	NA	NA	NA	NA	NA	NA	17341686	17367092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17341800_17362997_17363125_17363366_17363428_17364720
ENSMUSG00000095996.5_0	chr5	+	2797	3	FSM	ENSMUSG00000095996.5	ENSMUST00000101023.5	2832	3	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTCGGACCAGTG	NA	NA	NA	NA	NA	NA	NA	NA	95338767	95343201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_95339110_95339769_95340361_95341337
ENSMUSG00000096001.3_0	chr14	-	732	3	FSM	ENSMUSG00000096001.3	ENSMUST00000179488.3	754	3	14	8	14	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACACACTATGCCTGGAGC	NA	NA	NA	NA	NA	NA	NA	NA	36832044	36824106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_36824649_36829330_36829412_36831935
ENSMUSG00000096002.3_0	chr7	-	21370	6	FSM	ENSMUSG00000096002.3	ENSMUST00000233892.2	21388	6	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCTTGGCCATGGTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	12342702	12296782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12316374_12318629_12318754_12332327_12332565_12334575_12335374_12340186_12340479_12342374
ENSMUSG00000096006.2_0	chr2	-	1297	1	FSM	ENSMUSG00000096006.2	ENSMUST00000178049.2	1316	1	14	5	14	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	1112	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAGTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	113751472	113750175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_113750200_113751500
ENSMUSG00000096045.8_0	chr5	-	2981	5	FSM	ENSMUSG00000096045.8	ENSMUST00000191203.7	2995	5	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTACAAGTCTTTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	26193639	26187032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_26189325_26190068_26190253_26190887_26191032_26192285_26192446_26193438
ENSMUSG00000096054.4_10	chr10	-	4504	30	FSM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	0	0	0	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACATAATACAGGGACAACC	NA	NA	NA	NA	NA	NA	NA	NA	5406870	5288956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5289386_5292153_5292295_5293357_5293523_5294794_5294963_5296820_5296986_5297821_5297931_5298540_5298750_5298928_5299088_5299256_5299392_5300864_5301030_5302051_5302211_5303814_5303989_5306676_5306821_5308333_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806
ENSMUSG00000096054.4_29	chr10	-	2265	18	FSM	ENSMUSG00000096054.4	ENST00000466159.6	2282	18	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAAATGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	5492017	5308318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806_5406869_5491947
ENSMUSG00000096054.4_30	chr10	-	2151	17	ISM	ENSMUSG00000096054.4	ENST00000535896.7	2233	18	13638	15	13638	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAAATGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	5393232	5308318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139
ENSMUSG00000096054.4_31	chr10	-	2216	18	FSM	ENSMUSG00000096054.4	ENST00000535896.7	2233	18	2	15	2	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	1699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAAATGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	5406868	5308318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139_5393236_5406806
ENSMUSG00000096054.4_32	chr10	-	2197	17	ISM	ENSMUSG00000096054.4	ENST00000413186.6	4504	30	0	19362	0	-15	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAAATGAAACACAC	NA	NA	NA	NA	NA	NA	NA	NA	5406870	5308318	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_5308487_5308940_5309106_5310673_5310877_5311484_5311582_5317490_5317660_5318191_5318305_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5386738_5386823_5393139_5393236_5406806
ENSMUSG00000096054.4_62	chr10	-	1495	14	FSM	ENSMUSG00000096054.4	ENST00000610489.2	1497	14	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGGCCAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5492017	5329042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_5329167_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139_5393236_5406806_5406869_5491947
ENSMUSG00000096054.4_63	chr10	-	1427	13	ISM	ENSMUSG00000096054.4	ENST00000610489.2	1497	14	85149	0	0	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCAAGGCCAGCCCCTC	NA	NA	NA	NA	NA	NA	NA	NA	5406870	5329042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_5329167_5353840_5354006_5355424_5355563_5359763_5359872_5362862_5362911_5366789_5366900_5370379_5370577_5374203_5374383_5375667_5375761_5376254_5376276_5386738_5386823_5393139_5393236_5406806
ENSMUSG00000096140.3_0	chr17	-	1280	3	FSM	ENSMUSG00000096140.3	ENSMUST00000178772.3	1307	3	16	11	16	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAACCAATTTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	43854514	43845089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_43845994_43849768_43849998_43854367
ENSMUSG00000096188.2_0	chr8	-	7705	4	FSM	ENSMUSG00000096188.2	ENSMUST00000179802.2	7734	4	6	23	6	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTAAAAAAACAAACAAACA	NA	NA	NA	NA	NA	NA	NA	NA	105122433	105074845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_105081924_105082893_105082993_105084329_105084507_105122082
ENSMUSG00000096199.3_0	chr12	+	3823	2	FSM	ENSMUSG00000096199.3	ENSMUST00000179139.3	3840	2	8	9	8	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTCATTACCT	NA	NA	NA	NA	NA	NA	NA	NA	4284034	4289941	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_4284279_4286362
ENSMUSG00000096201.2_0	chr9	+	674	2	NNC	ENSMUSG00000096201.2	novel	675	4	NA	NA	6	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCCTGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3036882	3037848	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3037451_3037742
ENSMUSG00000096210.3_0	chr15	+	2028	1	FSM	ENSMUSG00000096210.3	ENSMUST00000180086.3	2055	1	11	16	11	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	3690	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAAAGGAAAAAATCTG	NA	NA	NA	NA	NA	NA	NA	NA	78912660	78914688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78912700_78914700
ENSMUSG00000096220.3_0	chr10	+	3565	2	FSM	ENSMUSG00000096220.3	ENSMUST00000214109.2	3598	2	20	13	20	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTACTATCAAAAGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	129084300	129089780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_129084468_129086382
ENSMUSG00000096255.3_0	chr17	+	749	5	FSM	ENSMUSG00000096255.3	ENSMUST00000179569.3	771	5	9	13	9	-13	multi-exon	TRUE	canonical	NA	NA	NA	NA	2340	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAAATTAAAGTTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	6697519	6703682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_6697638_6699278_6699321_6702406_6702531_6702868_6702947_6703295
ENSMUSG00000096276.10_0	chr12	+	1883	4	FSM	ENSMUSG00000096276.10	ENSMUST00000110145.12	1894	4	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCATGTATGTCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	87921208	87927453	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_87921353_87924570_87924882_87925394_87925971_87926601
ENSMUSG00000096351.3_0	chr4	-	1676	10	FSM	ENSMUSG00000096351.3	ENSMUST00000217934.2	2413	10	182	555	182	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGATCCGGCAGGCAAC	NA	NA	NA	NA	NA	NA	NA	NA	156339636	156332187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076_156333580_156333651_156333731_156333841_156333958_156334794_156334958_156336402_156336538_156336683_156336771_156339515
ENSMUSG00000096351.3_1	chr4	-	1732	11	FSM	ENSMUSG00000096351.3	ENST00000616016.5	1733	11	0	1	0	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	1636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAATGATCCGGCAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	156344085	156332188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156332427_156332544_156332656_156332793_156332916_156333076_156333580_156333651_156333731_156333841_156333958_156334794_156334958_156336402_156336538_156336683_156336771_156339515_156339641_156344032
ENSMUSG00000096365.5_0	chr19	+	2292	2	FSM	ENSMUSG00000096365.5	ENSMUST00000207246.4	2315	2	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAGAGGCACCAACTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	13208706	13213756	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_13208839_13211596
ENSMUSG00000096370.9_0	chr19	-	1419	3	FSM	ENSMUSG00000096370.9	ENSMUST00000179909.8	1435	3	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGGGTATGTGTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	4861527	4835186	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4835596_4837388_4838071_4861199
ENSMUSG00000096370.9_2	chr19	-	1424	3	FSM	ENSMUSG00000096370.9	ENSMUST00000172000.3	1434	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTTAAAGTTTGAGGT	NA	NA	NA	NA	NA	NA	NA	NA	4861536	4837406	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4838071_4842425_4842849_4861199
ENSMUSG00000096385.8_29	chr9	+	640	3	NIC	ENSMUSG00000096385.8	novel	684	5	NA	NA	41	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3003386	3005194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3003698_3004571_3004776_3005069
ENSMUSG00000096385.8_30	chr9	+	680	3	NNC	ENSMUSG00000096385.8	novel	684	5	NA	NA	1	-234	intron_retention	TRUE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCCTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3003346	3004960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3003698_3004571_3004776_3004835
ENSMUSG00000096385.8_44	chr9	+	666	2	NIC	ENSMUSG00000096385.8	novel	672	4	NA	NA	12	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTCCATGTCCTACTGT	NA	NA	NA	NA	NA	NA	NA	NA	3004468	3005194	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3005010_3005069
ENSMUSG00000096385.8_46	chr9	+	665	3	NIC	ENSMUSG00000096385.8	novel	672	5	NA	NA	15	0	intron_retention	TRUE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTCCATGTCTTACAGT	NA	NA	NA	NA	NA	NA	NA	NA	3005173	3006948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3005362_3006180_3006552_3006842
ENSMUSG00000096436.4_0	chr19	-	3751	2	FSM	ENSMUSG00000096436.4	ENSMUST00000207241.3	3751	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTTATATTGTTTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	12302465	12296570	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_12300213_12302356
ENSMUSG00000096472.3_0	chr9	-	1408	2	FSM	ENSMUSG00000096472.3	ENSMUST00000215619.2	1423	2	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGCGATGATGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	21202598	21199714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_21200629_21202104
ENSMUSG00000096525.3_0	chr6	-	857	5	FSM	ENSMUSG00000096525.3	ENSMUST00000166306.3	862	5	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTAATAACATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40976411	40972766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_40973012_40973647_40973785_40974331_40974586_40974866_40975030_40976353
ENSMUSG00000096525.3_1	chr6	-	789	4	ISM	ENSMUSG00000096525.3	ENSMUST00000166306.3	862	5	1394	3	1394	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTAATAACATTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40975019	40972766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_40973012_40973647_40973785_40974331_40974586_40974866
ENSMUSG00000096617.4_0	chr5	+	1194	1	FSM	ENSMUSG00000096617.4	ENSMUST00000180755.2	1002	1	-18	-174	-18	174	mono-exon	FALSE	NA	NA	NA	NA	NA	539	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96009554	96010748	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_96009600_96010700
ENSMUSG00000096640.4_0	chr10	-	880	1	FSM	ENSMUSG00000096640.4	ENSMUST00000190264.2	914	1	29	5	29	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAACGGGACCCAGAGG	NA	NA	NA	NA	NA	NA	NA	NA	100218393	100217513	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_100217500_100218400
ENSMUSG00000096696.2_0	chr17	+	2656	4	FSM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTAAGGGATGCAACA	NA	NA	NA	NA	NA	NA	NA	NA	17284379	17309884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17284469_17305782_17305910_17306151_17306213_17307505
ENSMUSG00000096696.2_2	chr17	+	2570	3	ISM	ENSMUSG00000096696.2	ENSMUST00000127027.2	2667	4	21406	5	21406	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTAAGGGATGCAACAT	NA	NA	NA	NA	NA	NA	NA	NA	17305780	17309885	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_17305910_17306151_17306213_17307505
ENSMUSG00000096712.2_0	chr1	+	477	1	FSM	ENSMUSG00000096712.2	ENSMUST00000179718.2	483	1	2	4	2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAATGACTCCTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	134445820	134446297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_134445800_134446300
ENSMUSG00000096718.3_0	chr10	-	4060	4	FSM	ENSMUSG00000096718.3	ENSMUST00000219144.2	4067	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGTATTTTTAACAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	81766314	81737751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81741500_81742300_81742428_81746721_81746858_81766265
ENSMUSG00000096718.3_3	chr10	-	743	2	FSM	ENSMUSG00000096718.3	ENST00000351773.7	762	2	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCTATGGATGCAAGCA	NA	NA	NA	NA	NA	NA	NA	NA	81741289	81740373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_81740753_81740925
ENSMUSG00000096727.4_0	chr17	-	699	6	FSM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACCAGAAGGCCGGTG	NA	NA	NA	NA	NA	NA	NA	NA	34406283	34401157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403383_34404699_34404772_34406223
ENSMUSG00000096727.4_1	chr17	-	631	5	ISM	ENSMUSG00000096727.4	ENST00000374859.3	702	6	1520	3	1520	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGAACCAGAAGGCCGGT	NA	NA	NA	NA	NA	NA	NA	NA	34404764	34401158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_34401326_34402062_34402205_34402588_34402719_34403255_34403383_34404699
ENSMUSG00000096736.2_1	chr9	+	674	2	NNC	ENSMUSG00000096736.2	novel	672	4	NA	NA	2	-471	intron_retention	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATATTCCATGTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	3034600	3035334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3035152_3035211
ENSMUSG00000096736.2_2	chr9	+	673	3	NNC	ENSMUSG00000096736.2	novel	672	4	NA	NA	3	-353	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATATTCCAAGTCCTACA	NA	NA	NA	NA	NA	NA	NA	NA	3034601	3035452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_+_3035152_3035211_3035303_3035420
ENSMUSG00000096736.2_5	chr9	+	658	2	NIC	ENSMUSG00000096736.2	novel	672	4	NA	NA	10	-10	intron_retention	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCTTACCATATTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	3034608	3035795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_+_3035152_3035680
ENSMUSG00000096740.9_0	chr19	+	3151	6	FSM	ENSMUSG00000096740.9	ENSMUST00000187504.7	3164	6	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTCCTTCCTTTTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	8861102	8869985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8861444_8861519_8861680_8864398_8864615_8866487_8866613_8867366_8867465_8867774
ENSMUSG00000096744.2_0	chr10	+	882	1	FSM	ENSMUSG00000096744.2	ENSMUST00000177945.2	910	1	16	12	16	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCCCAACAACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	100197215	100198097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100197200_100198100
ENSMUSG00000096753.8_0	chr12	+	1136	2	FSM	ENSMUSG00000096753.8	ENST00000556222.1	1151	2	13	2	13	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGAACACCCTCAGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	103281140	103282973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_103281334_103282030
ENSMUSG00000096768.9_0	chrY	+	691	4	FSM	ENSMUSG00000096768.9	ENSMUST00000179483.9	696	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATTGCAGTTGAAAT	NA	NA	NA	NA	NA	NA	NA	NA	90796006	90827711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_+_90796092_90796858_90797249_90804564_90804687_90827617
ENSMUSG00000096768.9_2	chrY	+	1255	3	FSM	ENSMUSG00000096768.9	ENSMUST00000238758.2	1272	3	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAAATGGATATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	90796191	90827722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_+_90797249_90804593_90804687_90827617
ENSMUSG00000096768.9_4	chrY	+	711	3	ISM	ENSMUSG00000096768.9	ENSMUST00000177591.2	774	4	59	6	0	0	intron_retention	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGCAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90796769	90827727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chrY_+_90797249_90804564_90804687_90827617
ENSMUSG00000096768.9_41	chrY	+	3331	2	NNC	ENSMUSG00000096768.9	novel	3347	2	NA	NA	9	5930	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	243	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGATATGCAGATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	90801728	90833664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chrY_+_90804950_90833554
ENSMUSG00000096768.9_42	chrY	+	3333	2	FSM	ENSMUSG00000096768.9	ENSMUST00000238471.2	3347	2	6	8	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGGATATGCAGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	90801725	90827726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_+_90804950_90827617
ENSMUSG00000096780.8_0	chr17	-	2412	9	FSM	ENSMUSG00000096780.8	ENSMUST00000180035.8	2426	9	13	1	13	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGACTTTTTGTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	6717131	6705923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_6706243_6709602_6709670_6709910_6710001_6710946_6711030_6712710_6712763_6713169_6713273_6714743_6716016_6716181_6716313_6716836
ENSMUSG00000096795.5_0	chr10	+	2366	4	FSM	ENSMUSG00000096795.5	ENSMUST00000200889.4	2384	4	6	12	6	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAATGATATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	81540664	81557798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81540735_81554752_81554880_81555078_81555140_81555690
ENSMUSG00000096795.5_1	chr10	+	2297	3	FSM	ENSMUSG00000096795.5	ENSMUST00000085664.6	1800	3	-1	-496	-1	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAATGATATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	81554751	81557798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81554880_81555078_81555140_81555690
ENSMUSG00000096822.3_0	chr2	+	7664	2	FSM	ENSMUSG00000096822.3	ENSMUST00000215879.2	7675	2	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAATCATCACCAATTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	36456673	36466179	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36456755_36458596
ENSMUSG00000096822.3_1	chr2	+	7587	1	FSM	ENSMUSG00000096822.3	ENSMUST00000075474.2	930	1	-17	-6640	-17	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCATCACCAATTCTTTAC	NA	NA	NA	NA	NA	NA	NA	NA	36458594	36466181	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_36458600_36466200
ENSMUSG00000096856.8_0	chr10	+	4723	4	FSM	ENSMUSG00000096856.8	ENSMUST00000189672.7	4735	4	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTGTGGTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	81484898	81503189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81485001_81497831_81497959_81498158_81498220_81498756
ENSMUSG00000096856.8_1	chr10	+	4622	3	FSM	ENSMUSG00000096856.8	ENSMUST00000105315.3	1497	3	-1	-3124	-1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTATTTGTGGTTATAAT	NA	NA	NA	NA	NA	NA	NA	NA	81497830	81503189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81497959_81498158_81498220_81498756
ENSMUSG00000096858.5_0	chr10	-	3284	5	FSM	ENSMUSG00000096858.5	ENSMUST00000217219.2	3314	5	21	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTTCACAAGCCAGGCCT	NA	NA	NA	NA	NA	NA	NA	NA	129565223	129557098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_129559433_129559558_129559660_129562911_129563041_129563156_129563352_129564698
ENSMUSG00000096858.5_1	chr10	-	911	1	FSM	ENSMUSG00000096858.5	ENSMUST00000078876.4	960	1	41	8	41	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAATAGCATGCTGTTGGG	NA	NA	NA	NA	NA	NA	NA	NA	129559370	129558459	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_129558500_129559400
ENSMUSG00000096910.3_0	chr17	+	5766	4	FSM	ENSMUSG00000096910.3	ENSMUST00000099414.5	5788	4	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTGTTGTGTTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	33508536	33526212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_33508644_33519554_33519682_33519918_33519977_33520738
ENSMUSG00000096917.3_0	chr8	+	2583	3	FSM	ENSMUSG00000096917.3	ENSMUST00000180690.2	2618	3	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGCTCCAGTGCTGCTTA	NA	NA	NA	NA	NA	NA	NA	NA	57941115	57961904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_57941228_57943373_57943502_57959561
ENSMUSG00000096922.2_0	chr3	+	1994	2	FSM	ENSMUSG00000096922.2	ENSMUST00000181749.2	1997	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTCCCAGCTTCTCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	5155338	5159836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_5155718_5158221
ENSMUSG00000096956.3_0	chr15	-	1456	2	FSM	ENSMUSG00000096956.3	ENSMUST00000181536.3	1486	2	18	12	18	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATCTACAAGCGGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	32244790	32240722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_32241916_32244527
ENSMUSG00000096960.2_0	chr16	+	2763	3	FSM	ENSMUSG00000096960.2	ENSMUST00000181655.2	2793	3	23	7	23	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATGATTCACAGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	24878411	24887801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_24878554_24883462_24883588_24885305
ENSMUSG00000096965.8_0	chr17	+	1162	3	FSM	ENSMUSG00000096965.8	ENSMUST00000181484.2	1174	3	12	0	12	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTCCAGACCTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	5849777	5853515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_5850269_5851473_5851617_5852987
ENSMUSG00000096968.2_0	chr1	+	800	1	FSM	ENSMUSG00000096968.2	ENSMUST00000180542.2	817	1	9	8	9	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTCACACAATAAGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	170712642	170713442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170712600_170713400
ENSMUSG00000096971.3_0	chr15	+	2238	4	FSM	ENSMUSG00000096971.3	ENSMUST00000228061.2	2257	4	6	13	6	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATTAAACATAGACAAG	NA	NA	NA	NA	NA	NA	NA	NA	10714991	10722540	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_10715067_10716733_10716805_10719149_10719516_10720814
ENSMUSG00000096971.3_1	chr15	+	2171	3	ISM	ENSMUSG00000096971.3	ENSMUST00000228061.2	2257	4	1747	6	1747	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATAGACAAGGAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	10716732	10722547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_10716805_10719149_10719516_10720814
ENSMUSG00000096974.3_0	chr4	+	569	4	FSM	ENSMUSG00000096974.3	ENSMUST00000180426.3	593	4	15	9	15	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTAAGACATCAGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	43046048	43053245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_43046278_43051236_43051378_43052944_43053052_43053153
ENSMUSG00000096981.3_0	chr9	+	1386	3	FSM	ENSMUSG00000096981.3	ENSMUST00000180419.2	1415	3	26	3	26	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTGAATTCATCTATGT	NA	NA	NA	NA	NA	NA	NA	NA	21982353	21997415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21982461_21987545_21987648_21996238
ENSMUSG00000097006.8_0	chr17	+	3150	3	FSM	ENSMUSG00000097006.8	ENSMUST00000181605.2	3162	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGTATATTTACGGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	23968216	23973034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_23968685_23968774_23969074_23970651
ENSMUSG00000097027.3_0	chr13	+	2424	2	FSM	ENSMUSG00000097027.3	ENSMUST00000181939.3	2481	2	47	10	47	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAGAATGTAAAGAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	99653183	99658258	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_99653367_99656017
ENSMUSG00000097028.3_0	chr1	-	2922	5	FSM	ENSMUSG00000097028.3	ENSMUST00000181915.2	2937	5	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGGAAAAGAACAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	149975559	149950629	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_149952797_149960330_149960391_149962870_149963097_149967354_149967443_149975178
ENSMUSG00000097039.9_0	chr15	+	1547	9	FSM	ENSMUSG00000097039.9	ENSMUST00000180432.9	1563	9	7	9	4	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACAATGACACTATTGAA	NA	NA	NA	NA	NA	NA	NA	NA	61909902	62121364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_61910051_61978996_61979315_62021087_62021202_62031845_62031978_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUSG00000097039.9_1	chr15	+	2789	7	FSM	ENSMUSG00000097039.9	ENSMUST00000181657.9	2798	7	6	3	6	-3	multi-exon	TRUE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAGTTTTAAGCGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	61909915	62122819	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_61910051_61978996_61979361_62047315_62047398_62114022_62114151_62114282_62114411_62116567_62116707_62121006
ENSMUSG00000097048.8_0	chr6	+	699	6	FSM	ENSMUSG00000097048.8	ENSMUST00000204008.3	713	6	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTAAAAACAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86503228	86541417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86503265_86504872_86504957_86509174_86509290_86527898_86528097_86540413_86540520_86541257
ENSMUSG00000097048.8_3	chr6	+	1978	4	FSM	ENSMUSG00000097048.8	ENSMUST00000204738.3	1997	4	8	11	8	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTAACTAAACTATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	86503799	86559007	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86504350_86504872_86504957_86509174_86509290_86557778
ENSMUSG00000097048.8_7	chr6	+	659	5	ISM	ENSMUSG00000097048.8	ENSMUST00000204008.3	713	6	1648	14	421	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTAAAAACAGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	86504876	86541417	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_86504957_86509174_86509290_86527898_86528097_86540413_86540520_86541257
ENSMUSG00000097048.8_8	chr6	+	2006	3	FSM	ENSMUSG00000097048.8	ENSMUST00000204663.2	2007	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGAATGCGTCTTTCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	86524962	86559447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_86525139_86554942_86555104_86557778
ENSMUSG00000097055.3_0	chr12	+	1724	2	FSM	ENSMUSG00000097055.3	ENSMUST00000180671.2	1729	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21467911	21469799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_21468836_21468999
ENSMUSG00000097061.3_0	chr12	+	2531	2	FSM	ENSMUSG00000097061.3	ENSMUST00000181850.3	2545	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTATCATTGTATATG	NA	NA	NA	NA	NA	NA	NA	NA	69243992	69246635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_69244390_69244501
ENSMUSG00000097073.8_0	chr9	-	3117	4	ISM	ENSMUSG00000097073.8	ENSMUST00000180723.8	3177	5	161	15	161	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAGAATATAAATAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	88481135	88477392	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_88480301_88480521_88480618_88480933_88481009_88481097
ENSMUSG00000097073.8_1	chr9	-	3164	5	FSM	ENSMUSG00000097073.8	ENSMUST00000180723.8	3177	5	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATATAAATAGAAAACAC	NA	NA	NA	NA	NA	NA	NA	NA	88481296	88477390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88480301_88480521_88480618_88480933_88481009_88481097_88481153_88481268
ENSMUSG00000097081.2_0	chr12	-	3328	2	FSM	ENSMUSG00000097081.2	ENSMUST00000181085.2	3364	2	21	15	21	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTAAATAAATAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	111397359	111393322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111396568_111397276
ENSMUSG00000097084.2_0	chr8	+	2691	1	FSM	ENSMUSG00000097084.2	ENSMUST00000181609.2	2705	1	4	10	4	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACTAAGGGAAAAAAAATC	NA	NA	NA	NA	NA	NA	NA	NA	121854682	121857373	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_121854700_121857400
ENSMUSG00000097093.3_0	chr15	-	866	2	FSM	ENSMUSG00000097093.3	ENSMUST00000181034.3	881	2	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATCATAAAGACTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	100512985	100512026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_100512572_100512664
ENSMUSG00000097099.3_1	chr9	-	5188	2	FSM	ENSMUSG00000097099.3	ENSMUST00000180865.3	5192	2	3	1	3	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107445608	107436008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_107441113_107445524
ENSMUSG00000097099.3_2	chr9	-	5106	1	NIC	ENSMUSG00000097099.3	novel	5192	2	NA	NA	4497	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTGTGTGTTTTTTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	107441114	107436008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr9_-_107436000_107441100
ENSMUSG00000097101.4_0	chr13	+	1783	3	FSM	ENSMUSG00000097101.4	ENSMUST00000181403.3	1805	3	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTCTAATCTCCAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	64396532	64415959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64397018_64414190_64414364_64414834
ENSMUSG00000097113.8_0	chr1	+	407	3	FSM	ENSMUSG00000097113.8	ENSMUST00000181524.8	413	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACAGTTCCTTTCTTGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	136611133	136618536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_136611212_136616481_136616549_136618274
ENSMUSG00000097119.3_0	chr17	+	4884	3	FSM	ENSMUSG00000097119.3	ENSMUST00000181149.2	4897	3	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCACATTTGTGATTGTT	NA	NA	NA	NA	NA	NA	NA	NA	45744783	45753463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_45745154_45747008_45748116_45750056
ENSMUSG00000097121.3_0	chr12	+	2412	2	FSM	ENSMUSG00000097121.3	ENSMUST00000180800.2	2431	2	7	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAATGTTAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	101048746	101055174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_101050285_101054300
ENSMUSG00000097145.6_0	chr5	+	413	3	FSM	ENSMUSG00000097145.6	ENSMUST00000199547.5	437	3	13	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACGACTCGAGGGAC	NA	NA	NA	NA	NA	NA	NA	NA	52348026	52351838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52348280_52350259_52350321_52351739
ENSMUSG00000097145.6_1	chr5	+	833	6	FSM	ENSMUSG00000097145.6	ENSMUST00000198720.2	837	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAATCTCTCAATTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	52348058	52403238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_52348280_52350259_52350321_52352142_52352233_52354234_52354366_52369384_52369495_52403018
ENSMUSG00000097148.3_0	chr14	+	1691	4	FSM	ENSMUSG00000097148.3	ENSMUST00000181173.2	1712	4	0	21	0	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	11113046	11189017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_11113278_11121504_11121695_11122853_11122898_11187791
ENSMUSG00000097150.2_0	chr15	+	2469	1	FSM	ENSMUSG00000097150.2	ENSMUST00000181802.2	2489	1	5	15	5	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACGTGAAACTCCCACC	NA	NA	NA	NA	NA	NA	NA	NA	97991168	97993637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_97991200_97993600
ENSMUSG00000097164.3_1	chr10	-	6556	3	FSM	ENSMUSG00000097164.3	ENSMUST00000181906.3	6566	3	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTAGCTATTAGTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	94524433	94506891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_94512992_94514192_94514310_94524094
ENSMUSG00000097166.2_0	chr6	+	639	2	FSM	ENSMUSG00000097166.2	ENST00000646245.1	652	2	5	8	5	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGAGAGCAGTGATGGT	NA	NA	NA	NA	NA	NA	NA	NA	127126364	127149731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_127126527_127149254
ENSMUSG00000097177.9_0	chr9	-	527	4	ISM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	439	0	370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGGTTATGAGCCATT	NA	NA	NA	NA	NA	NA	NA	NA	88740484	88739284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442
ENSMUSG00000097177.9_1	chr9	-	597	5	FSM	ENSMUSG00000097177.9	ENSMUST00000181448.3	602	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAAAATTGGTTATGAG	NA	NA	NA	NA	NA	NA	NA	NA	88740923	88739289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88739637_88739866_88739925_88740278_88740354_88740442_88740498_88740861
ENSMUSG00000097183.3_0	chr3	+	1680	2	FSM	ENSMUSG00000097183.3	ENSMUST00000181247.3	1700	2	10	10	10	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGAAACAGCGGCTGC	NA	NA	NA	NA	NA	NA	NA	NA	145356076	145358218	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_145356676_145357137
ENSMUSG00000097191.3_0	chr5	-	1694	3	ISM	ENSMUSG00000097191.3	ENSMUST00000180733.2	1740	4	2040	8	2040	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTGTGTCTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	149118833	149056382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_149056640_149064183_149065592_149118804
ENSMUSG00000097191.3_1	chr5	-	1648	2	ISM	ENSMUSG00000097191.3	ENSMUST00000180733.2	1740	4	55292	15	55292	-15	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACTTAACAATGTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	149065581	149056389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_149056640_149064183
ENSMUSG00000097191.3_2	chr5	-	1732	4	FSM	ENSMUSG00000097191.3	ENSMUST00000180733.2	1740	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATGTGTGTCTGAGATG	NA	NA	NA	NA	NA	NA	NA	NA	149120873	149056382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_149056640_149064183_149065592_149118804_149118846_149120847
ENSMUSG00000097195.11_0	chr9	-	1655	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239369.2	1678	5	12	11	12	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCAAATATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88405603	88403113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536
ENSMUSG00000097195.11_1	chr9	-	812	6	FSM	ENSMUSG00000097195.11	ENSMUST00000182232.9	826	6	3	11	3	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCAAATATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88405024	88403113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404640_88404903
ENSMUSG00000097195.11_3	chr9	-	799	6	FSM	ENSMUSG00000097195.11	ENSMUST00000239365.2	809	6	1	9	1	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCAAATATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88404969	88403113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404359_88404435_88404536_88404682_88404903
ENSMUSG00000097195.11_5	chr9	-	1018	4	FSM	ENSMUSG00000097195.11	ENSMUST00000239274.2	1037	4	10	9	10	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCAAATATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88405002	88403113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88403502_88403702_88403770_88403970_88404435_88404903
ENSMUSG00000097195.11_8	chr9	-	696	5	FSM	ENSMUSG00000097195.11	ENSMUST00000239327.2	705	5	0	9	0	5	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCAAATATTTATTCAA	NA	NA	NA	NA	NA	NA	NA	NA	88404941	88403113	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_88403502_88403702_88403770_88403970_88404029_88404536_88404682_88404903
ENSMUSG00000097204.3_0	chr3	-	3435	2	FSM	ENSMUSG00000097204.3	ENSMUST00000180958.2	3467	2	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAACAAAAGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	96079698	96074779	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96076969_96078452
ENSMUSG00000097205.2_0	chr9	+	1517	2	FSM	ENSMUSG00000097205.2	ENSMUST00000181617.2	1528	2	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGTTGTTGTTGTTGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	40442455	40444910	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_40442535_40443472
ENSMUSG00000097216.4_0	chr5	-	2291	2	FSM	ENSMUSG00000097216.4	ENST00000660555.1	2300	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2071	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTGATCCTCCCTGCCA	NA	NA	NA	NA	NA	NA	NA	NA	57876985	57873913	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_57874407_57875187
ENSMUSG00000097232.2_0	chr15	-	702	4	FSM	ENSMUSG00000097232.2	ENSMUST00000180418.2	705	4	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGACCTTCCTTGTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	41652306	41621457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_41621702_41625518_41625655_41626235_41626411_41652159
ENSMUSG00000097233.2_0	chr19	+	3869	2	FSM	ENSMUSG00000097233.2	ENSMUST00000181211.2	3877	2	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACACCTGGTTTAACATG	NA	NA	NA	NA	NA	NA	NA	NA	4219569	4224280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4221741_4222582
ENSMUSG00000097239.8_0	chr11	-	1835	16	ISM	ENSMUSG00000097239.8	ENSMUST00000107257.8	1898	17	257	8	257	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCATGCTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	101315088	101297497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980
ENSMUSG00000097239.8_1	chr11	-	1889	17	FSM	ENSMUSG00000097239.8	ENSMUST00000107257.8	1898	17	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTTCATGCTGTGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	101315344	101297497	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315296
ENSMUSG00000097239.8_3	chr11	-	1823	17	FSM	ENSMUSG00000097239.8	ENSMUST00000107259.4	1855	17	25	7	25	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCAAACATGGTTGTATAC	NA	NA	NA	NA	NA	NA	NA	NA	101315597	101297671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101297851_101298956_101299052_101300478_101300534_101300939_101301032_101301179_101301247_101301586_101301718_101301908_101302026_101302119_101302277_101302765_101302824_101304762_101304923_101307928_101308061_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097239.8_4	chr11	-	345	4	FSM	ENSMUSG00000097487.8	ENST00000409446.8	361	4	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGAGGTAGGAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	101315538	101312698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101312781_101314605_101314705_101314802_101314870_101315441
ENSMUSG00000097239.8_5	chr11	-	249	3	ISM	ENSMUSG00000097487.8	ENST00000409446.8	361	4	676	8	625	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAGAGGTAGGAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	101314870	101312698	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101312781_101314605_101314705_101314802
ENSMUSG00000097248.10_0	chr8	+	1110	7	FSM	ENSMUSG00000097248.10	ENSMUST00000210935.2	1125	7	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTAATGTCCGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	88187102	88252171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_88187333_88221484_88221786_88222337_88222490_88240436_88240525_88248363_88248442_88250923_88251056_88252042
ENSMUSG00000097271.2_0	chr5	+	1745	2	FSM	ENSMUSG00000097271.2	ENSMUST00000181102.2	1747	2	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACCTCTTCTCCTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	33787268	33789434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_33787639_33788059
ENSMUSG00000097275.2_0	chr5	-	5817	3	FSM	ENSMUSG00000097275.2	ENSMUST00000181925.2	5831	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGAATGAGCTTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	24909681	24901906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24902408_24904189_24909216_24909391
ENSMUSG00000097277.8_0	chr7	+	694	4	FSM	ENSMUSG00000097277.8	ENSMUST00000180879.8	725	4	16	15	16	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAAAAAAACTATCA	NA	NA	NA	NA	NA	NA	NA	NA	81173334	81181227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_81173425_81178534_81178689_81179094_81179276_81180958
ENSMUSG00000097287.4_0	chr5	+	2258	1	FSM	ENSMUSG00000097287.4	ENSMUST00000196629.2	2265	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCAGCCTGCTTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	143752065	143754323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_143752100_143754300
ENSMUSG00000097290.10_0	chr16	+	756	4	FSM	ENSMUSG00000097290.10	ENSMUST00000211443.2	767	4	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGTTGAAAGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	21613075	21627787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21613197_21614599_21614726_21625720_21625870_21627427
ENSMUSG00000097290.10_1	chr16	+	3550	5	FSM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTAGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21613141	21624873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_21613197_21614599_21614726_21619464_21619587_21620030_21620107_21621702
ENSMUSG00000097290.10_2	chr16	+	3495	4	ISM	ENSMUSG00000097290.10	ENSMUST00000180830.3	3557	5	1458	7	1458	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTAGTTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	21614599	21624873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_21614726_21619464_21619587_21620030_21620107_21621702
ENSMUSG00000097308.2_0	chr8	+	1090	2	FSM	ENSMUSG00000097308.2	ENSMUST00000181337.2	1105	2	8	7	8	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCTCCCATCTCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	4728469	4738487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4728567_4737494
ENSMUSG00000097313.3_0	chr16	-	619	3	ISM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	7465	1	7465	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATCAGGACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29757869	29726342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_29726669_29727207_29727322_29757690
ENSMUSG00000097313.3_1	chr16	-	687	4	FSM	ENSMUSG00000097313.3	ENSMUST00000232297.2	699	4	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGGCATCAGGACAGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	29765323	29726342	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_29726669_29727207_29727322_29757690_29757886_29765271
ENSMUSG00000097316.3_0	chr1	+	2595	4	FSM	ENSMUSG00000097316.3	ENSMUST00000180598.3	2615	4	6	14	6	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAAAAGAAACTAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	191821201	191835309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_191821362_191828733_191828837_191829513_191829748_191833211
ENSMUSG00000097318.3_0	chr16	-	705	2	FSM	ENSMUSG00000097318.3	ENSMUST00000180923.2	737	2	24	8	24	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAACCATTTCTGGAATT	NA	NA	NA	NA	NA	NA	NA	NA	33201073	33200232	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33200750_33200885
ENSMUSG00000097320.9_0	chr7	+	1267	6	FSM	ENSMUSG00000097320.9	ENSMUST00000180820.8	1276	6	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGATCTCAGCTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	30429005	30445347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30429280_30431838_30432187_30434128_30434194_30435240_30435388_30436725_30436785_30444973
ENSMUSG00000097324.9_0	chr18	-	1767	3	FSM	ENSMUSG00000097324.9	ENSMUST00000181155.4	1778	3	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCAACATCAGTACCACAC	NA	NA	NA	NA	NA	NA	NA	NA	61798607	61784054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_61785478_61787500_61787610_61798372
ENSMUSG00000097327.8_0	chr10	-	2051	2	FSM	ENSMUSG00000097327.8	ENSMUST00000179054.8	2081	2	21	9	21	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAACAGCTAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	22025148	21988957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_21990248_22024387
ENSMUSG00000097327.8_1	chr10	-	860	2	FSM	ENSMUSG00000097327.8	ENSMUST00000069372.7	876	2	14	2	14	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTTCCGGAGCCTTCGC	NA	NA	NA	NA	NA	NA	NA	NA	22025155	22020321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_22020414_22024387
ENSMUSG00000097328.8_0	chr11	-	1413	7	FSM	ENSMUSG00000097328.8	ENSMUST00000181810.8	1435	7	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAATCACAAAGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	69586664	69577086	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69577918_69578077_69578203_69584331_69584368_69584446_69584501_69585575_69585652_69586219_69586268_69586421
ENSMUSG00000097331.3_0	chr10	+	2386	3	FSM	ENSMUSG00000097331.3	ENSMUST00000181578.2	2396	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAACTGGCTTGCAATGT	NA	NA	NA	NA	NA	NA	NA	NA	127031127	127038512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_127031337_127033005_127033064_127036393
ENSMUSG00000097333.8_0	chr13	-	2645	4	FSM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGCCTGGTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	67674290	67663904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67666232_67668744_67668841_67669311_67669439_67674195
ENSMUSG00000097333.8_1	chr13	-	2552	3	ISM	ENSMUSG00000097333.8	ENSMUST00000181767.8	2656	4	4856	5	4825	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTGCCTGGTCATAGT	NA	NA	NA	NA	NA	NA	NA	NA	67669440	67663904	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67666232_67668744_67668841_67669311
ENSMUSG00000097343.3_0	chr7	-	2287	3	FSM	ENSMUSG00000097343.3	ENSMUST00000180933.3	2310	3	13	10	13	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAATATAGCACTGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	120276730	120272668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_120274500_120275630_120275880_120276523
ENSMUSG00000097346.2_0	chr13	+	1068	3	FSM	ENSMUSG00000097346.2	ENSMUST00000180396.2	1073	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTTCTGTGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	97887619	97897468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_97887661_97887919_97888078_97896599
ENSMUSG00000097346.2_5	chr13	+	1015	2	ISM	ENSMUSG00000097346.2	ENSMUST00000180396.2	1073	3	312	5	312	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCATTTCTGTGTGTTCA	NA	NA	NA	NA	NA	NA	NA	NA	97887931	97897468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_97888078_97896599
ENSMUSG00000097350.3_0	chr17	+	3162	2	FSM	ENSMUSG00000097350.3	ENSMUST00000181774.3	3174	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTACCAATGTCGGATTGA	NA	NA	NA	NA	NA	NA	NA	NA	12537744	12546130	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_12538060_12543283
ENSMUSG00000097352.8_0	chr10	+	4514	3	FSM	ENSMUSG00000097352.8	ENSMUST00000181223.8	4535	3	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATCACGAATGCATATT	NA	NA	NA	NA	NA	NA	NA	NA	22182619	22188841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_22182764_22183065_22183198_22184603
ENSMUSG00000097354.8_0	chr6	-	650	4	FSM	ENSMUSG00000097354.8	ENSMUST00000205051.3	676	4	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTATCAGTTACAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	129214936	129193321	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_129193500_129204590_129204738_129210026_129210117_129214701
ENSMUSG00000097354.8_1	chr6	-	511	4	FSM	ENSMUSG00000097354.8	ENSMUST00000180379.4	521	4	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGAGAAGTTGACTTGC	NA	NA	NA	NA	NA	NA	NA	NA	129215445	129209655	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_129209911_129210026_129210117_129214701_129214821_129215398
ENSMUSG00000097354.8_2	chr6	-	460	3	ISM	ENSMUSG00000097354.8	ENSMUST00000180379.4	521	4	626	13	92	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAACTGAGAAGTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	129214819	129209658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_129209911_129210026_129210117_129214701
ENSMUSG00000097365.8_0	chr3	+	3123	2	FSM	ENSMUSG00000097365.8	ENSMUST00000181930.3	3133	2	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAATATATTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	9468144	9478958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_9468300_9475990
ENSMUSG00000097373.2_0	chr13	+	622	2	FSM	ENSMUSG00000097373.2	ENSMUST00000180728.2	633	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTGGTTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	41513457	41524384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_41513607_41523911
ENSMUSG00000097381.3_0	chr12	+	2078	3	FSM	ENSMUSG00000097381.3	ENSMUST00000181055.2	2098	3	16	4	16	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTACAAACTGATTCTACA	NA	NA	NA	NA	NA	NA	NA	NA	111251233	111260418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_111251739_111258547_111258639_111258936
ENSMUSG00000097384.2_0	chr8	-	3361	2	FSM	ENSMUSG00000097384.2	ENSMUST00000181200.2	3366	2	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCGAAAATGAAAATGTAC	NA	NA	NA	NA	NA	NA	NA	NA	122083574	121983489	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121986050_122082773
ENSMUSG00000097386.2_0	chr11	-	1576	2	FSM	ENSMUSG00000097386.2	ENSMUST00000180487.2	1581	2	5	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGCTGAATATTATAA	NA	NA	NA	NA	NA	NA	NA	NA	69013410	69010879	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_69012411_69013365
ENSMUSG00000097386.2_1	chr11	-	1510	1	ISM	ENSMUSG00000097386.2	ENSMUST00000180487.2	1581	2	1021	5	1021	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTCCAGGCTGAATAT	NA	NA	NA	NA	NA	NA	NA	NA	69012394	69010884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_69010900_69012400
ENSMUSG00000097392.5_0	chr5	+	9530	9	FSM	ENSMUSG00000097392.5	ENSMUST00000239307.3	9550	9	12	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGAACACAGCTTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	104656227	104702065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104656438_104665288_104670591_104671982_104672015_104672124_104672292_104673683_104673839_104686691_104686840_104689031_104689129_104697451_104697557_104698751
ENSMUSG00000097392.5_1	chr5	+	5169	2	FSM	ENSMUSG00000097392.5	ENSMUST00000096452.7	5181	2	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCACAGATAATGAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	104656217	104670237	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_104656438_104665288
ENSMUSG00000097397.3_0	chr16	-	1681	3	FSM	ENSMUSG00000097397.3	ENSMUST00000181498.3	1694	3	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATGAGTCTTGCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	4757490	4752918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_4754047_4756731_4757029_4757234
ENSMUSG00000097404.3_0	chr19	+	1961	5	FSM	ENSMUSG00000097404.3	ENSMUST00000180505.3	1969	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACACACAAAGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6062649	6068484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_6062715_6064258_6064387_6064898_6065843_6066346_6066514_6067827
ENSMUSG00000097404.3_1	chr19	+	1896	4	ISM	ENSMUSG00000097404.3	ENSMUST00000180505.3	1969	5	1609	8	1609	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACACACAAAGCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	6064258	6068484	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_6064387_6064898_6065843_6066346_6066514_6067827
ENSMUSG00000097412.3_0	chr10	+	1597	3	FSM	ENSMUSG00000097412.3	ENSMUST00000218095.2	1622	3	19	6	19	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTAAAGACTTATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	86521407	86525812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_86521473_86521743_86521861_86524397
ENSMUSG00000097412.3_1	chr10	+	1527	2	FSM	ENSMUSG00000097412.3	ENSMUST00000218536.2	204	2	-6	-1317	-6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTTTTAAAGACTTATGT	NA	NA	NA	NA	NA	NA	NA	NA	86521746	86525810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_86521861_86524397
ENSMUSG00000097414.3_0	chr15	+	755	3	FSM	ENSMUSG00000097414.3	ENST00000552284.1	764	3	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1757	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTTCCTCAGCTTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98704835	98729331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_98705106_98716609_98716709_98728945
ENSMUSG00000097415.3_0	chr7	-	2988	1	FSM	ENSMUSG00000097415.3	ENSMUST00000206358.2	3009	1	17	4	17	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAATTGTGGTAGTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	75421777	75418789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_75418800_75421800
ENSMUSG00000097415.3_1	chr7	-	647	3	FSM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCAGATGGAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75431845	75419516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_75419986_75430372_75430505_75431799
ENSMUSG00000097415.3_2	chr7	-	574	2	ISM	ENSMUSG00000097415.3	ENSMUST00000181224.2	656	3	1370	7	1370	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGCAGATGGAGGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75430477	75419516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_75419986_75430372
ENSMUSG00000097431.3_0	chr14	+	2479	2	FSM	ENSMUSG00000097431.3	ENSMUST00000181482.2	2513	2	26	8	26	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACCTACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51107858	51116452	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51108014_51114128
ENSMUSG00000097439.7_0	chr9	+	2067	3	FSM	ENSMUSG00000097439.7	ENSMUST00000181222.7	2077	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTGCTCCAAGCCCTAA	NA	NA	NA	NA	NA	NA	NA	NA	21136676	21143935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_21136773_21137241_21137315_21142037
ENSMUSG00000097443.3_0	chr12	+	3093	2	FSM	ENSMUSG00000097443.3	ENSMUST00000180738.3	3093	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	58999874	59014797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_58999946_59011775
ENSMUSG00000097443.3_1	chr12	+	3020	1	ISM	ENSMUSG00000097443.3	ENSMUST00000180738.3	3093	2	11903	0	11903	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	59011777	59014797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_59011800_59014800
ENSMUSG00000097445.2_0	chr9	-	207	2	NNC	ENSMUSG00000097445.2	novel	2505	2	NA	NA	5202	2275	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCCTCATCTGTCTCGT	NA	NA	NA	NA	NA	NA	NA	NA	57439710	57436294	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_57436354_57439562
ENSMUSG00000097445.2_2	chr9	-	2481	2	FSM	ENSMUSG00000097445.2	ENSMUST00000181462.2	2505	2	17	7	17	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	57444895	57438576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_57440869_57444706
ENSMUSG00000097466.9_0	chr9	+	1724	5	FSM	ENSMUSG00000097466.9	ENSMUST00000181447.8	1732	5	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAATTCATTTTTTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	81513982	81527201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_81514333_81518887_81518991_81521213_81521237_81524599_81524756_81526109
ENSMUSG00000097467.3_0	chr9	+	2111	2	FSM	ENSMUSG00000097467.3	ENSMUST00000181106.3	2151	2	31	9	31	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGTTACAACTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	44024250	44033248	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44024533_44031419
ENSMUSG00000097487.8_0	chr11	-	786	6	ISM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	405	9	405	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGATCCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101315090	101309646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980
ENSMUSG00000097487.8_1	chr11	-	844	7	FSM	ENSMUSG00000097487.8	ENSMUST00000107252.9	853	7	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGATCCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101315495	101309646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101310013_101310500_101310555_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097487.8_2	chr11	-	1448	6	FSM	ENSMUSG00000097487.8	ENSMUST00000103102.10	1463	6	6	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAATGATCCTTCCCTTCC	NA	NA	NA	NA	NA	NA	NA	NA	101316153	101309646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101310013_101312690_101312781_101314605_101314705_101314802_101314870_101314980_101315095_101315441
ENSMUSG00000097495.2_0	chr13	+	2319	3	FSM	ENSMUSG00000097495.2	ENSMUST00000181851.2	2325	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAAGCAGGCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52127249	52130613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_52127308_52127402_52127584_52128533
ENSMUSG00000097495.2_2	chr13	+	2255	2	ISM	ENSMUSG00000097495.2	ENSMUST00000181851.2	2325	3	159	6	159	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCAAGCAGGCTGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	52127408	52130613	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_52127584_52128533
ENSMUSG00000097503.3_0	chr1	+	1125	3	FSM	ENSMUSG00000097503.3	ENSMUST00000180638.3	1135	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGCACCACGTTCCA	NA	NA	NA	NA	NA	NA	NA	NA	169796977	169799955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_169797145_169798018_169798372_169799350
ENSMUSG00000097519.3_0	chr1	-	2028	4	FSM	ENSMUSG00000097519.3	ENSMUST00000181949.3	2052	4	19	5	19	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCAGTCAAAATAGATTC	NA	NA	NA	NA	NA	NA	NA	NA	57416684	57398385	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_57399823_57401724_57401923_57414406_57414679_57416563
ENSMUSG00000097530.2_0	chr7	+	1443	1	FSM	ENSMUSG00000097530.2	ENSMUST00000181818.2	1461	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTTGACATTCATTCTG	NA	NA	NA	NA	NA	NA	NA	NA	72322574	72324017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_72322600_72324000
ENSMUSG00000097534.4_0	chr8	-	2558	5	FSM	ENSMUSG00000097534.4	ENSMUST00000208508.3	2586	5	25	3	25	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGGATGACTGTCTTAGC	NA	NA	NA	NA	NA	NA	NA	NA	47192518	47121845	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_47123750_47127958_47128064_47131741_47131897_47189306_47189379_47192196
ENSMUSG00000097571.10_0	chrX	+	1776	6	FSM	ENSMUSG00000097571.10	ENSMUST00000234244.2	1806	6	14	16	-3	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATCAAAAAAAAATTCT	NA	NA	NA	NA	NA	NA	NA	NA	102537183	102574300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_102537307_102540043_102540137_102546465_102546799_102561916_102561964_102568472_102568603_102573250
ENSMUSG00000097577.3_0	chr14	-	1526	3	FSM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	26	2	26	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACACAGTAGGCTCTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	20753054	20737305	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20738682_20738832_20738908_20752979
ENSMUSG00000097577.3_1	chr14	-	1446	2	ISM	ENSMUSG00000097577.3	ENSMUST00000180987.2	1554	3	14170	10	14170	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCTCCACACACAGTAGG	NA	NA	NA	NA	NA	NA	NA	NA	20738910	20737313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_20738682_20738832
ENSMUSG00000097577.3_2	chr14	-	995	1	FSM	ENSMUSG00000097577.3	ENSMUST00000224976.2	1019	1	17	7	1	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAGCCCAAAATGGTG	NA	NA	NA	NA	NA	NA	NA	NA	20753079	20752084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_20752100_20753100
ENSMUSG00000097589.10_0	chr14	-	1424	5	FSM	ENSMUSG00000097589.10	ENSMUST00000182768.8	1442	5	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGTATGATCTCATACA	NA	NA	NA	NA	NA	NA	NA	NA	61919817	61840300	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61841256_61869885_61869933_61872973_61873041_61880808_61880905_61919558
ENSMUSG00000097589.10_2	chr14	-	633	3	FSM	ENSMUSG00000097589.10	ENSMUST00000182286.2	666	3	24	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGATTTTTTTTAAGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	61919739	61872684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_61873041_61880808_61880905_61919558
ENSMUSG00000097616.8_0	chr6	+	1493	3	FSM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATTACTGTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	13871567	13896415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_13871627_13881271_13881381_13895090
ENSMUSG00000097616.8_1	chr6	+	1428	2	ISM	ENSMUSG00000097616.8	ENSMUST00000181225.2	1499	3	9710	6	9710	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTATTACTGTTATGGA	NA	NA	NA	NA	NA	NA	NA	NA	13881277	13896415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_+_13881381_13895090
ENSMUSG00000097636.9_0	chr19	-	3249	10	FSM	ENSMUSG00000097636.9	ENSMUST00000180489.9	3261	10	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGGAATGTGTTTCACTA	NA	NA	NA	NA	NA	NA	NA	NA	53453207	53431665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_53431979_53433680_53433776_53434771_53434915_53435206_53435319_53435586_53435745_53437705_53439624_53439843_53439935_53440052_53440196_53451738_53451924_53453116
ENSMUSG00000097651.3_0	chr9	+	818	3	FSM	ENSMUSG00000097651.3	ENSMUST00000181967.3	843	3	15	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACATGTAACTGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	58362419	58376908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_58362640_58374083_58374201_58376427
ENSMUSG00000097673.2_0	chr5	-	1928	3	FSM	ENSMUSG00000097673.2	ENSMUST00000180740.2	1954	3	26	0	26	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	28276077	28224462	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_28225685_28259683_28260114_28275801
ENSMUSG00000097690.3_0	chr19	+	924	2	FSM	ENSMUSG00000097690.3	ENSMUST00000181820.2	945	2	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTGTGGTTACAGATAT	NA	NA	NA	NA	NA	NA	NA	NA	45986588	46001817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_45987159_46001463
ENSMUSG00000097692.3_0	chr10	-	1880	1	FSM	ENSMUSG00000097692.3	ENSMUST00000190739.2	1889	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACAAATTCTGTAGATT	NA	NA	NA	NA	NA	NA	NA	NA	85858190	85856310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_85856300_85858200
ENSMUSG00000097709.9_0	chr13	+	667	3	FSM	ENSMUSG00000097709.9	ENSMUST00000188642.2	674	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTCTGGGTTTGCTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	3548044	3551386	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_3548157_3548274_3548359_3550915
ENSMUSG00000097715.3_0	chr13	-	1931	7	FSM	ENSMUSG00000097715.3	ENSMUST00000220758.2	1942	7	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	562	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTTTGTAGAGTTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12665267	12629946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12630739_12632613_12632739_12634654_12634784_12636246_12636397_12638757_12638981_12645583_12645634_12664805
ENSMUSG00000097729.3_0	chr12	-	1365	3	FSM	ENSMUSG00000097729.3	ENSMUST00000180643.3	1399	3	31	3	-11	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCCCGAGCTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	80179587	80170768	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_80171901_80178587_80178734_80179500
ENSMUSG00000097738.3_0	chr18	+	1108	2	FSM	ENSMUSG00000097738.3	ENSMUST00000235556.2	1126	2	9	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGCTGCAAGCCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	82874027	82877343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_82874758_82876965
ENSMUSG00000097748.2_0	chr18	-	1779	3	FSM	ENSMUSG00000097748.2	ENSMUST00000180550.2	1790	3	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTTAAAAAAAGGAATTT	NA	NA	NA	NA	NA	NA	NA	NA	31922093	31914284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_31915576_31918602_31918808_31921810
ENSMUSG00000097754.2_0	chr1	-	1711	2	FSM	ENSMUSG00000097754.2	ENSMUST00000181308.2	1745	2	25	9	25	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATCTCAACAATAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	150040674	150034802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_150036404_150040564
ENSMUSG00000097763.2_3	chr6	-	4110	24	NNC	ENSMUSG00000097763.2	novel	1115	3	NA	NA	864	20999	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTAGGTGGAAGAGGG	NA	NA	NA	NA	NA	NA	NA	NA	87890577	87864825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_-_87865052_87866047_87866104_87866636_87866718_87866935_87867010_87867171_87867248_87868926_87869005_87869185_87869278_87869611_87869699_87870774_87870934_87871020_87871154_87872672_87872742_87872906_87873096_87874932_87875029_87879177_87879421_87880463_87880541_87881067_87881173_87881796_87881921_87882177_87882248_87884352_87884493_87884786_87884961_87885515_87885615_87886644_87886783_87887019_87887118_87889151
ENSMUSG00000097766.2_0	chr10	+	1156	5	FSM	ENSMUSG00000097766.2	ENSMUST00000181781.2	1182	5	19	7	19	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCAAGTACCTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	95253255	95264495	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_95253542_95256012_95256134_95257425_95257538_95258716_95258858_95263999
ENSMUSG00000097768.3_0	chr16	-	1567	2	FSM	ENSMUSG00000097768.3	ENSMUST00000180967.3	1580	2	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAACAAATACACCTTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	93591781	93589028	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_93590271_93591456
ENSMUSG00000097772.8_0	chr5	-	599	5	FSM	ENSMUSG00000097772.8	ENSMUST00000181873.8	626	5	14	13	-5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGTAAAACTGAAACATT	NA	NA	NA	NA	NA	NA	NA	NA	100577380	100568713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100568832_100569826_100569901_100574594_100574664_100576955_100577098_100577184
ENSMUSG00000097785.3_0	chr19	-	1619	3	FSM	ENSMUSG00000097785.3	ENSMUST00000181921.2	1642	3	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCCGCTTCTGTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	57349192	57311824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_57312495_57313027_57313230_57348445
ENSMUSG00000097787.3_0	chr19	+	1622	2	FSM	ENSMUSG00000097787.3	ENSMUST00000181612.3	1647	2	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAACAAGAGAATTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	32366626	32368576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_32366777_32367104
ENSMUSG00000097788.3_0	chr12	-	596	5	FSM	ENSMUSG00000097788.3	ENSMUST00000180576.3	604	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCCACACTCCTGGAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	108521869	108503602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_108503783_108505512_108505566_108505656_108505730_108506839_108506898_108521637
ENSMUSG00000097789.3_0	chr7	+	7037	3	FSM	ENSMUSG00000097789.3	ENSMUST00000180387.3	7055	3	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGGGCAGATACTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	84178170	84232730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_84178398_84224912_84225050_84226057
ENSMUSG00000097820.4_0	chr9	-	5244	1	FSM	ENSMUSG00000097820.4	ENSMUST00000181325.4	5282	1	26	12	26	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCTAAAACCTGAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	121588983	121583739	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121583700_121589000
ENSMUSG00000097863.2_0	chr5	-	570	2	FSM	ENSMUSG00000097863.2	ENSMUST00000181488.2	589	2	19	0	19	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATCCAACCGTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	110144245	110143376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110143686_110143984
ENSMUSG00000097882.3_0	chr8	+	1518	1	FSM	ENSMUSG00000097882.3	ENSMUST00000184762.2	1524	1	2	4	2	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGAGGCGATCTGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	78243686	78245204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_78243700_78245200
ENSMUSG00000097887.3_0	chr11	+	1226	3	FSM	ENSMUSG00000097887.3	ENSMUST00000180443.3	1235	3	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTATTTTTTTGAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	50127841	50179660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_50128207_50175242_50175422_50178978
ENSMUSG00000097899.3_0	chr1	-	817	4	FSM	ENSMUSG00000097899.3	ENSMUST00000181756.3	842	4	21	4	21	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGAGCCAGGCGGTGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	40124990	40115391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_40115799_40124126_40124175_40124303_40124448_40124772
ENSMUSG00000097908.8_0	chr5	+	4052	5	FSM	ENSMUSG00000097908.8	ENSMUST00000181190.3	4058	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCAGCCTCGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136948254	136965960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_136948286_136949284_136949625_136951160_136951282_136954557_136954750_136962592
ENSMUSG00000097908.8_1	chr5	+	4010	4	ISM	ENSMUSG00000097908.8	ENSMUST00000181190.3	4058	5	1041	6	1041	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTCAGCCTCGCTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	136949295	136965960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_136949625_136951160_136951282_136954557_136954750_136962592
ENSMUSG00000097919.2_0	chr8	-	734	4	FSM	ENSMUSG00000097919.2	ENSMUST00000181333.2	758	4	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAACCCAGACCCCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	121394802	121335532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_121335770_121337932_121338077_121355210_121355257_121394495
ENSMUSG00000097924.3_0	chr6	-	3363	2	FSM	ENSMUSG00000097924.3	ENSMUST00000180421.3	3387	2	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTTGCAGTCTTTTG	NA	NA	NA	NA	NA	NA	NA	NA	61157230	61150966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_61154067_61156967
ENSMUSG00000097960.2_0	chr8	-	2465	3	FSM	ENSMUSG00000097960.2	ENSMUST00000183235.2	2489	3	16	8	16	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCCACCAAAGAGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	120954953	120931180	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_120933225_120951263_120951395_120954663
ENSMUSG00000097993.8_0	chr1	-	6102	37	FSM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGGTTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135060332	135036241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822_135037900_135037989_135038069_135038150_135038239_135038387_135038456_135038783_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048262_135048439_135048704_135050069_135050343_135051276_135051553_135051685_135051932_135052032_135052288_135052980_135053245_135053442_135053713_135053873_135054147_135054314_135054364_135054753_135054821_135055774_135055852_135056391_135056460_135056854_135057489_135060257
ENSMUSG00000097993.8_3	chr1	-	6021	36	ISM	ENSMUSG00000097993.8	ENSMUST00000183317.8	6108	37	2850	6	2850	-6	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCATGGTTGTGTCTGC	NA	NA	NA	NA	NA	NA	NA	NA	135057482	135036241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_135036434_135036656_135036793_135037023_135037188_135037300_135037418_135037546_135037676_135037822_135037900_135037989_135038069_135038150_135038239_135038387_135038456_135038783_135038920_135039039_135039201_135039927_135040051_135040627_135040763_135041847_135041925_135042038_135042130_135042279_135042374_135044121_135044170_135044256_135044384_135045851_135045920_135046399_135046611_135046966_135047108_135047403_135047686_135047994_135048262_135048439_135048704_135050069_135050343_135051276_135051553_135051685_135051932_135052032_135052288_135052980_135053245_135053442_135053713_135053873_135054147_135054314_135054364_135054753_135054821_135055774_135055852_135056391_135056460_135056854
ENSMUSG00000098001.2_1	chr8	-	4624	2	FSM	ENSMUSG00000098001.2	ENSMUST00000182891.2	4627	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACATGTATGTGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	81665293	81660162	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_81664703_81665209
ENSMUSG00000098002.2_0	chr15	-	1001	1	FSM	ENSMUSG00000098002.2	ENSMUST00000182757.2	1012	1	2	9	2	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAGTAAGAAACCCATAC	NA	NA	NA	NA	NA	NA	NA	NA	43081555	43080554	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_43080600_43081600
ENSMUSG00000098022.8_0	chr7	-	2168	7	FSM	ENSMUSG00000098022.8	ENSMUST00000080834.15	2181	7	1	12	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATACTAATATAATGTGT	NA	NA	NA	NA	NA	NA	NA	NA	29772324	29755473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_29756945_29761653_29761744_29765665_29765793_29767489_29767576_29769409_29769574_29771453_29771565_29772205
ENSMUSG00000098024.2_0	chr2	+	483	2	FSM	ENSMUSG00000098024.2	ENSMUST00000182590.2	497	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAATCTATTGGTAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	126517843	126525719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_126517968_126525360
ENSMUSG00000098086.2_0	chr8	-	885	1	ISM	ENSMUSG00000098086.2	ENSMUST00000182952.2	985	2	290	8	290	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATGTAAAACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	88227569	88226684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_88226700_88227600
ENSMUSG00000098086.2_1	chr8	-	975	2	FSM	ENSMUSG00000098086.2	ENSMUST00000182952.2	985	2	2	8	2	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTATGTAAAACTGATGT	NA	NA	NA	NA	NA	NA	NA	NA	88227857	88226684	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_88227594_88227791
ENSMUSG00000098090.9_0	chr17	+	1245	10	FSM	ENSMUSG00000098090.9	ENSMUST00000182402.8	1275	10	24	6	-14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTAAAGTGTGGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95057551	95082551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_95057661_95062638_95062734_95063861_95063952_95068925_95069033_95069889_95070049_95071199_95071353_95074284_95074376_95078561_95078667_95079284_95079389_95082319
ENSMUSG00000098090.9_1	chr17	+	940	7	FSM	ENSMUSG00000098090.9	ENSMUST00000182475.8	969	7	20	9	20	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTAAAGTGTGGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95057585	95082551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_95057661_95069889_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ENSMUSG00000098090.9_3	chr17	+	867	6	ISM	ENSMUSG00000098090.9	ENSMUST00000182475.8	969	7	12322	9	9965	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTAAAGTGTGGGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	95069887	95082551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_95070049_95071199_95071353_95074284_95074376_95078540_95078667_95079284_95079389_95082319
ENSMUSG00000098098.8_0	chr18	+	563	3	FSM	ENSMUSG00000098098.8	ENSMUST00000183087.2	588	3	13	12	13	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATGTACGAATGA	NA	NA	NA	NA	NA	NA	NA	NA	61772736	61780531	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_61772840_61778233_61778437_61780274
ENSMUSG00000098120.2_0	chr8	-	361	2	FSM	ENSMUSG00000098120.2	ENSMUST00000182863.2	375	2	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGCCTCTTCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	106363974	106350973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106351108_106363747
ENSMUSG00000098134.2_0	chr12	+	1357	1	FSM	ENSMUSG00000098134.2	ENSMUST00000183146.2	1383	1	18	8	18	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTCTAGTACCCTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	84463987	84465344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_84464000_84465300
ENSMUSG00000098172.8_0	chr12	+	590	2	FSM	ENSMUSG00000098172.8	ENST00000521292.2	595	2	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGAGCTACAGCACTTT	NA	NA	NA	NA	NA	NA	NA	NA	56581769	56584377	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_56582170_56584187
ENSMUSG00000098176.3_0	chr15	-	2430	2	FSM	ENSMUSG00000098176.3	ENSMUST00000183130.3	2458	2	22	6	22	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGCCCCGTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75854269	75851726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75853537_75853649
ENSMUSG00000098176.3_1	chr15	-	2563	1	FSM	ENSMUSG00000098176.3	ENSMUST00000182172.2	2584	1	15	6	2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCAGCCCCGTTGTCTTG	NA	NA	NA	NA	NA	NA	NA	NA	75854289	75851726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_75851700_75854300
ENSMUSG00000098188.2_0	chr10	+	4469	1	FSM	ENSMUSG00000098188.2	ENSMUST00000182161.2	4482	1	3	10	3	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATCAAAGTGCTGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	59057777	59062246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_59057800_59062200
ENSMUSG00000098221.2_0	chr8	+	450	1	FSM	ENSMUSG00000098221.2	ENSMUST00000182551.2	464	1	4	10	4	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTGTAAATGCCGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	122380796	122381246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_122380800_122381200
ENSMUSG00000098234.8_1	chr1	-	466	4	FSM	ENSMUSG00000098234.8	ENSMUST00000182580.8	473	4	3	4	3	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGCTGCGGACTTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	10014340	10012187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_10012381_10012547_10012617_10012834_10012943_10014244
ENSMUSG00000098234.8_2	chr1	-	788	3	FSM	ENSMUSG00000098234.8	ENSMUST00000182819.8	816	3	20	8	20	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAATTGCTGTGGGCA	NA	NA	NA	NA	NA	NA	NA	NA	10013428	10012255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_10012381_10012547_10012617_10012834
ENSMUSG00000098274.8_0	chr16	+	661	6	FSM	ENSMUSG00000098274.8	ENSMUST00000023269.5	677	6	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	11806	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTAGGTGGTGCTGATT	NA	NA	NA	NA	NA	NA	NA	NA	55786646	55791791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55791673
ENSMUSG00000098318.8_0	chr6	+	5645	2	FSM	ENSMUSG00000098318.8	ENSMUST00000183867.7	5662	2	11	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCCCGGCTCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	134906065	134933755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_134906224_134928268
ENSMUSG00000098332.3_0	chr9	+	478	2	FSM	ENSMUSG00000098332.3	ENSMUST00000184126.3	496	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAATCTAAGTTATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	72947011	72950055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72947148_72949713
ENSMUSG00000098371.2_0	chr16	+	604	6	FSM	ENSMUSG00000098371.2	ENSMUST00000122365.2	611	6	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCTGGAGAAGAAAGTAATG	NA	NA	NA	NA	NA	NA	NA	NA	55786706	55801078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_55786802_55786909_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55800957
ENSMUSG00000098371.2_1	chr16	+	508	5	ISM	ENSMUSG00000098371.2	ENSMUST00000122365.2	611	6	204	7	204	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTGGAGAAGAAAGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	55786909	55801077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_55786986_55787422_55787534_55789872_55790010_55790474_55790539_55800957
ENSMUSG00000098449.2_0	chr5	+	632	1	FSM	ENSMUSG00000098449.2	ENSMUST00000185173.2	652	1	14	6	14	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCCAAAAATCCTGTCTA	NA	NA	NA	NA	NA	NA	NA	NA	76452736	76453368	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_76452700_76453400
ENSMUSG00000098488.8_0	chr2	+	2211	15	FSM	ENSMUSG00000098488.8	ENST00000452633.5	2238	15	17	10	17	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGCGCAAACAGTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	119865415	119872066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_119865538_119865676_119865806_119866495_119866632_119866869_119867001_119867227_119867339_119868218_119868355_119868976_119869114_119869343_119869567_119869697_119869816_119870109_119870248_119870338_119870444_119870623_119870804_119870958_119871126_119871601_119871789_119871875
ENSMUSG00000098505.4_0	chr2	+	5406	6	FSM	ENSMUSG00000098505.4	ENSMUST00000236373.2	5418	6	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGAGGCTTGGAGATCCT	NA	NA	NA	NA	NA	NA	NA	NA	181632926	181645647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_181633225_181636749_181637033_181637416_181638221_181639204_181639430_181640552_181640677_181641975
ENSMUSG00000098557.2_0	chr14	-	6043	1	FSM	ENSMUSG00000098557.2	ENSMUST00000184744.2	6057	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTCCCCCTGGTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	103220065	103214022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103214000_103220100
ENSMUSG00000098650.2_0	chr11	-	2711	2	ISM	ENSMUSG00000098650.2	ENSMUST00000160826.2	2746	3	25413	8	25413	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATCACGTATAATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	22906677	22784751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_-_22787196_22906410
ENSMUSG00000098773.2_0	chr14	-	4055	3	FSM	ENSMUSG00000098773.2	ENSMUST00000184652.2	3017	3	0	-1038	0	1038	multi-exon	TRUE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTTCATTTGTCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	69749998	69745042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69748657_69748807_69749005_69749754
ENSMUSG00000098843.2_0	chr9	-	632	3	FSM	ENSMUSG00000098843.2	ENSMUST00000183616.2	677	3	33	12	33	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGAAGAGCAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	32622434	32620959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_32621233_32621968_32622136_32622242
ENSMUSG00000098905.3_0	chr13	-	4665	4	FSM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	3	9	3	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAATAGCTGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67508721	67487378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67491722_67493413_67493510_67495906_67496034_67508622
ENSMUSG00000098905.3_1	chr13	-	4568	3	ISM	ENSMUSG00000098905.3	ENSMUST00000081582.8	4677	4	12689	9	12689	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCAATAGCTGAGGCTG	NA	NA	NA	NA	NA	NA	NA	NA	67496035	67487378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_67491722_67493413_67493510_67495906
ENSMUSG00000098923.2_0	chr1	+	2805	1	FSM	ENSMUSG00000098923.2	ENSMUST00000183952.2	2824	1	17	2	17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	463	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCACACCCTCAGCATCC	NA	NA	NA	NA	NA	NA	NA	NA	119453906	119456711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_119453900_119456700
ENSMUSG00000098950.8_0	chr2	-	5496	17	FSM	ENSMUSG00000098950.8	ENSMUST00000132494.8	5505	17	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACCTCCTCAGTGGCCG	NA	NA	NA	NA	NA	NA	NA	NA	155953821	155913773	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155915582_155915718_155915956_155916095_155916230_155918156_155918209_155919318_155919374_155919475_155919610_155919694_155919755_155919848_155919936_155920066_155920342_155920493_155920575_155920671_155920744_155920819_155920895_155920982_155921163_155921258_155921385_155938337_155940293_155945268_155945318_155953705
ENSMUSG00000099041.2_2	chr2	+	763	8	FSM	ENSMUSG00000079484.13	ENST00000421063.6	769	8	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30156918	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167094_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_20	chr2	+	759	8	ISM	ENSMUSG00000079484.13	ENST00000308941.9	809	9	2791	6	2791	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30159709	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_21	chr2	+	773	9	ISM	ENSMUSG00000079484.13	ENST00000372592.8	831	10	2799	6	2799	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30159717	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_22	chr2	+	722	7	ISM	ENSMUSG00000079484.13	ENST00000421063.6	769	8	2788	6	2788	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30159706	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_+_30159864_30164487_30164558_30164687_30164736_30167014_30167094_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_3	chr2	+	803	9	FSM	ENSMUSG00000079484.13	ENST00000308941.9	809	9	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30156918	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099041.2_7	chr2	+	825	10	FSM	ENSMUSG00000079484.13	ENST00000372592.8	831	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGTAGGTACCAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	30156918	30171143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_30156954_30159700_30159864_30164487_30164558_30164687_30164736_30167014_30167071_30167159_30167223_30167634_30167657_30169966_30170096_30170182_30170300_30171021
ENSMUSG00000099083.8_0	chr15	-	7132	12	FSM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGAATGACTGGTATG	NA	NA	NA	NA	NA	NA	NA	NA	102533882	102437082	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
ENSMUSG00000099083.8_1	chr15	-	7043	11	ISM	ENSMUSG00000099083.8	ENSMUST00000184616.8	7147	12	31715	10	31338	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAATGACTGGTATGTT	NA	NA	NA	NA	NA	NA	NA	NA	102502170	102437080	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_102442874_102446617_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106
ENSMUSG00000099083.8_4	chr15	-	2875	11	FSM	ENSMUSG00000099083.8	ENSMUST00000108828.9	2887	11	1	11	1	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATACAAACAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	102533887	102445088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_102446727_102449174_102449373_102454839_102454993_102455588_102455703_102456207_102456308_102459838_102459997_102462218_102462357_102465894_102466014_102471748_102471846_102502106_102502176_102533796
ENSMUSG00000099148.2_0	chr9	+	999	2	FSM	ENSMUSG00000099148.2	ENSMUST00000183423.2	1017	2	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCCGATTGCTGTTATTG	NA	NA	NA	NA	NA	NA	NA	NA	32725042	32745395	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_32725156_32744509
ENSMUSG00000099216.2_0	chr7	-	1160	3	FSM	ENSMUSG00000099216.2	ENSMUST00000184356.2	1167	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGATTTTGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14067482	14065367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_14066019_14066544_14067018_14067446
ENSMUSG00000099216.2_1	chr7	-	1114	2	ISM	ENSMUSG00000099216.2	ENSMUST00000184356.2	1167	3	475	7	475	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGATTTTGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	14067007	14065367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_14066019_14066544
ENSMUSG00000099364.3_0	chr1	-	2063	2	FSM	ENSMUSG00000099364.3	ENSMUST00000190504.3	2091	2	21	7	21	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTATTTAAAAAAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	78588057	78571669	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_78573492_78587816
ENSMUSG00000099449.2_1	chr11	-	1150	3	FSM	ENSMUSG00000099449.2	ENST00000653254.1	1166	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGTACACCCAGCACATACA	NA	NA	NA	NA	NA	NA	NA	NA	18706725	18664401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_18665404_18706444_18706497_18706629
ENSMUSG00000099517.3_0	chr13	+	526	1	FSM	ENSMUSG00000099517.3	ENSMUST00000080859.8	530	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATCAGTTTCATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	23719595	23720121	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_23719600_23720100
ENSMUSG00000099528.2_0	chr14	+	1350	4	FSM	ENSMUSG00000099528.2	ENSMUST00000190896.2	1357	4	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTTTAAACCTTGCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	71090372	71111387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_71090436_71093220_71093350_71109694_71109847_71110381
ENSMUSG00000099528.2_1	chr14	+	1289	3	ISM	ENSMUSG00000099528.2	ENSMUST00000190896.2	1357	4	2853	0	2853	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCTTGCAGTTTGTGGTA	NA	NA	NA	NA	NA	NA	NA	NA	71093225	71111394	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_71093350_71109694_71109847_71110381
ENSMUSG00000099552.2_0	chr1	+	2171	2	FSM	ENSMUSG00000099552.2	ENSMUST00000185548.2	2177	2	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGCAATGCTGTCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	80164689	80169785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_80164799_80167723
ENSMUSG00000099632.2_0	chr2	+	546	1	FSM	ENSMUSG00000099632.2	ENSMUST00000190930.2	567	1	12	9	12	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGCAATTTACCAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	163261726	163262272	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_163261700_163262300
ENSMUSG00000099681.2_0	chr11	-	3699	1	FSM	ENSMUSG00000099681.2	ENSMUST00000190120.2	3708	1	8	1	8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATCTGTATTCAAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	105072251	105068552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_105068600_105072300
ENSMUSG00000099689.7_0	chr7	+	2607	5	FSM	ENSMUSG00000099689.7	ENSMUST00000186475.2	2614	5	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACTAAGTTTCATAATTTT	NA	NA	NA	NA	NA	NA	NA	NA	29607947	29616231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_29608077_29609607_29609673_29611593_29611721_29612014_29612111_29614041
ENSMUSG00000099850.2_0	chr1	-	1757	2	FSM	ENSMUSG00000099850.2	ENSMUST00000191371.2	1779	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCAGGGCCTTTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	45875932	45872965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_45873298_45874507
ENSMUSG00000099881.2_0	chr8	+	2117	1	FSM	ENSMUSG00000099881.2	ENSMUST00000186531.2	2137	1	13	7	13	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATACTCATGTTTTACC	NA	NA	NA	NA	NA	NA	NA	NA	123769217	123771334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123769200_123771300
ENSMUSG00000099891.2_0	chr5	-	390	1	FSM	ENSMUSG00000099891.2	ENSMUST00000190879.2	398	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTGGCACAAAAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	24414722	24414332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_24414300_24414700
ENSMUSG00000099906.3_0	chr1	+	5252	1	FSM	ENSMUSG00000099906.3	ENSMUST00000185494.2	5276	1	19	5	19	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGCTTGCACTTGTC	NA	NA	NA	NA	NA	NA	NA	NA	20749265	20754517	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_20749300_20754500
ENSMUSG00000099913.2_0	chr1	-	3094	7	FSM	ENSMUSG00000099913.2	ENSMUST00000144660.3	3142	7	37	11	37	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGACGAGTAAAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53391789	53364676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_53365617_53369370_53369568_53385738_53385921_53386173_53387718_53389145_53389222_53390038_53390093_53391688
ENSMUSG00000099927.2_0	chr9	+	861	1	FSM	ENSMUSG00000099927.2	ENSMUST00000190511.2	798	1	-23	-40	-23	40	mono-exon	FALSE	NA	NA	NA	NA	NA	430	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84306013	84306874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_84306000_84306900
ENSMUSG00000100009.7_0	chr1	+	5042	1	FSM	ENSMUSG00000100009.7	ENSMUST00000191042.2	5042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAAAAATATAAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	98517241	98522283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_98517200_98522300
ENSMUSG00000100009.7_1	chr1	+	1025	5	FSM	ENSMUSG00000100009.7	ENSMUST00000191409.7	1049	5	19	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCAAAAAATCCTGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	98517260	98535104	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_98517383_98524972_98525119_98532855_98532913_98533442_98533706_98534667
ENSMUSG00000100009.7_3	chr1	+	380	3	FSM	ENSMUSG00000100009.7	ENSMUST00000190991.2	399	3	0	19	0	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCTAAAAATTAAATGACT	NA	NA	NA	NA	NA	NA	NA	NA	98517242	98534850	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_98517383_98532855_98532913_98534667
ENSMUSG00000100017.3_0	chr14	+	1897	1	FSM	ENSMUSG00000100017.3	ENSMUST00000186474.3	1911	1	6	8	6	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTGTTAATCATAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	57049451	57051348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_57049500_57051300
ENSMUSG00000100130.2_1	chr9	-	531	3	ISM	ENSMUSG00000100130.2	ENST00000559303.2	581	4	2190	12	14	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAACCAAAACTTAGTG	NA	NA	NA	NA	NA	NA	NA	NA	66355764	66325596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_66325881_66355339_66355437_66355614
ENSMUSG00000100130.2_2	chr9	-	568	4	FSM	ENSMUSG00000100130.2	ENST00000559303.2	581	4	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAACCAAAACTTAGT	NA	NA	NA	NA	NA	NA	NA	NA	66357954	66325597	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_66325881_66355339_66355437_66355614_66355775_66357926
ENSMUSG00000100135.2_0	chr2	+	567	3	FSM	ENSMUSG00000100135.2	ENST00000413525.2	586	3	9	10	9	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1501	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAATTTTAAGTCCTTT	NA	NA	NA	NA	NA	NA	NA	NA	45006803	45058463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_45007029_45046934_45047073_45058259
ENSMUSG00000100153.3_0	chr7	+	2312	1	FSM	ENSMUSG00000100153.3	ENSMUST00000118909.2	972	1	-217	-1123	-15	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119339133	119341445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119339100_119341400
ENSMUSG00000100153.3_1	chr7	+	1432	2	FSM	ENSMUSG00000100153.3	ENSMUST00000207161.2	1437	2	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119339149	119341445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_119340294_119341157
ENSMUSG00000100162.3_0	chr14	+	4237	7	FSM	ENSMUSG00000100162.3	ENSMUST00000185121.8	4242	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTACGTGGGTCTTTATTT	NA	NA	NA	NA	NA	NA	NA	NA	55292949	55336438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55293081_55293480_55293635_55293820_55293888_55309318_55311468_55311782_55311821_55312117_55312214_55334836
ENSMUSG00000100162.3_1	chr14	+	1409	3	FSM	ENSMUSG00000045691.15	ENST00000404535.3	1424	3	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAAAATGGTCATTGT	NA	NA	NA	NA	NA	NA	NA	NA	55332402	55335514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_55332573_55332902_55333464_55334836
ENSMUSG00000100164.2_0	chr6	-	1026	1	FSM	ENSMUSG00000100164.2	ENSMUST00000185414.2	1042	1	12	4	12	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATAGGTTATTTTTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	86826410	86825384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_86825400_86826400
ENSMUSG00000100180.2_0	chr1	-	687	3	FSM	ENSMUSG00000100180.2	ENST00000430551.2	703	3	5	11	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGATTCAGTATAGACT	NA	NA	NA	NA	NA	NA	NA	NA	42394782	42363753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_42364251_42364841_42364863_42394613
ENSMUSG00000100235.9_0	chr13	-	2525	4	FSM	ENSMUSG00000058883.17	ENSMUST00000109743.5	2536	4	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	67246034	67217468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856
ENSMUSG00000100235.9_1	chr13	-	3868	7	FSM	ENSMUSG00000100235.9	ENSMUST00000186303.7	3886	7	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATCGTCAGTGTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	67256601	67217468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_67219593_67222149_67222246_67222896_67223024_67245856_67247112_67250106_67250200_67250761_67250846_67256512
ENSMUSG00000100257.2_0	chr1	-	675	5	FSM	ENSMUSG00000100257.2	ENST00000243611.9	690	5	10	5	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	4298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGATATTTTACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	130611793	130598015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_130598139_130598683_130598811_130609885_130609977_130610538_130610716_130611636
ENSMUSG00000100315.7_0	chr12	-	448	3	FSM	ENSMUSG00000100315.7	ENSMUST00000191400.2	466	3	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAAATGACAGGTCTAT	NA	NA	NA	NA	NA	NA	NA	NA	52649094	52648388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_52648636_52648772_52648842_52648962
ENSMUSG00000100394.2_0	chr1	-	1752	1	FSM	ENSMUSG00000100394.2	ENSMUST00000185888.2	1779	1	19	8	19	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCTCTCTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	152756030	152754278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_152754300_152756000
ENSMUSG00000100410.2_0	chr13	-	709	6	FSM	ENSMUSG00000100410.2	ENSMUST00000189489.2	720	6	1	10	1	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTCCAAGGTCAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	99224428	99213043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_99213309_99215216_99215359_99215440_99215547_99220151_99220184_99220335_99220433_99224361
ENSMUSG00000100431.3_0	chr7	-	1131	2	FSM	ENSMUSG00000100431.3	ENSMUST00000211456.2	1180	2	28	21	28	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTCTTTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	39447123	39440411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_39441375_39446955
ENSMUSG00000100437.2_0	chr1	+	313	3	FSM	ENSMUSG00000100437.2	ENSMUST00000189284.2	325	3	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAAAGGTATTTCCTCCT	NA	NA	NA	NA	NA	NA	NA	NA	64689093	64691903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_64689262_64691654_64691743_64691846
ENSMUSG00000100550.3_0	chr10	+	3734	2	FSM	ENSMUSG00000100550.3	ENSMUST00000219492.2	3743	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTAATATTAGCTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	95197468	95202064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_95197947_95198808
ENSMUSG00000100594.2_0	chr1	-	1280	1	ISM	ENSMUSG00000100594.2	ENSMUST00000186444.2	1381	2	4790	0	4790	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	151625979	151624699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_151624700_151626000
ENSMUSG00000100594.2_1	chr1	-	1357	2	FSM	ENSMUSG00000100594.2	ENSMUST00000186444.2	1381	2	24	0	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	151630745	151624699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_151625980_151630668
ENSMUSG00000100596.2_0	chr13	+	3717	3	FSM	ENSMUSG00000100596.2	ENSMUST00000185979.2	3739	3	15	7	15	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCTACTATATGGATGT	NA	NA	NA	NA	NA	NA	NA	NA	100983955	101114416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_100984158_101067626_101067901_101111175
ENSMUSG00000100599.3_0	chr15	+	381	3	FSM	ENSMUSG00000100599.3	ENSMUST00000187967.2	391	3	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCAATGTGCTTTATTTA	NA	NA	NA	NA	NA	NA	NA	NA	99149671	99159918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_99149883_99159505_99159590_99159832
ENSMUSG00000100600.7_0	chr7	-	2462	4	FSM	ENSMUSG00000100600.7	ENSMUST00000189574.7	2477	4	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTAGTCCTTGGGCCCC	NA	NA	NA	NA	NA	NA	NA	NA	40550352	40467905	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_40469285_40523557_40523684_40524361_40525163_40550196
ENSMUSG00000100627.7_0	chr1	-	5211	4	FSM	ENSMUSG00000100627.7	ENSMUST00000190485.2	5226	4	6	9	6	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAGGATAACAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	153993691	153923863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_153927297_153952760_153953899_153987941_153988076_153993185
ENSMUSG00000100658.2_0	chr1	+	5421	3	FSM	ENSMUSG00000100658.2	ENSMUST00000189288.2	5447	3	0	26	0	-26	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGACCTGTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	132269760	132277338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132269806_132270048_132270140_132272053
ENSMUSG00000100658.2_4	chr1	+	5361	2	ISM	ENSMUSG00000100658.2	ENSMUST00000189288.2	5447	3	303	26	303	-26	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGGACCTGTGCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	132270063	132277338	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_132270140_132272053
ENSMUSG00000100691.2_0	chr8	+	992	1	FSM	ENSMUSG00000100691.2	ENSMUST00000191396.2	1009	1	13	4	13	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAGCCCAGGCTGTATCTG	NA	NA	NA	NA	NA	NA	NA	NA	71229471	71230463	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_71229500_71230500
ENSMUSG00000100706.7_0	chr8	+	481	3	FSM	ENSMUSG00000100706.7	ENST00000315302.6	487	3	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTCCCAGCTCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	49296837	49297687	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_49296927_49297137_49297282_49297439
ENSMUSG00000100706.7_2	chr8	+	388	2	ISM	ENSMUSG00000100706.7	ENST00000315302.6	487	3	304	6	304	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCCCAGGTCCCAGCT	NA	NA	NA	NA	NA	NA	NA	NA	49297135	49297681	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_49297282_49297439
ENSMUSG00000100755.2_0	chr3	+	411	1	FSM	ENSMUSG00000100755.2	ENSMUST00000116115.3	425	1	0	14	0	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGCCAAGATCATA	NA	NA	NA	NA	NA	NA	NA	NA	37768888	37769299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_37768900_37769300
ENSMUSG00000100768.2_0	chr1	+	1689	1	FSM	ENSMUSG00000100768.2	ENSMUST00000186337.2	1710	1	11	10	11	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GATAATAACAGAAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	86702551	86704240	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86702600_86704200
ENSMUSG00000100782.2_0	chr9	+	2587	3	FSM	ENSMUSG00000100782.2	ENSMUST00000190118.2	2599	3	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAACATACTAATCA	NA	NA	NA	NA	NA	NA	NA	NA	88141952	88145081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_88142080_88142249_88142378_88142749
ENSMUSG00000100798.2_0	chr1	+	2601	6	FSM	ENSMUSG00000100798.2	ENSMUST00000189394.2	2623	6	11	11	11	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAAAGTTAATTCAGGA	NA	NA	NA	NA	NA	NA	NA	NA	88479249	88489878	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_88479490_88482878_88482975_88484046_88484498_88484930_88485041_88487589_88487713_88488297
ENSMUSG00000100801.2_0	chr5	-	1923	1	FSM	ENSMUSG00000100801.2	ENSMUST00000117405.2	1941	1	13	5	13	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAGTCAGTCCAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	5833542	5831619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_5831600_5833500
ENSMUSG00000100811.2_0	chr1	-	697	2	FSM	ENSMUSG00000100811.2	ENSMUST00000189205.2	733	2	29	7	29	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTCCAAGGGAAGGAACC	NA	NA	NA	NA	NA	NA	NA	NA	62757203	62753888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_62754499_62757116
ENSMUSG00000100813.2_0	chr4	+	3127	1	FSM	ENSMUSG00000100813.2	ENSMUST00000190917.2	3134	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATAAACAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131993025	131996152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_131993000_131996200
ENSMUSG00000100862.2_0	chr1	-	657	1	FSM	ENSMUSG00000100862.2	ENSMUST00000189941.2	678	1	10	11	10	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAATACATAATGACCC	NA	NA	NA	NA	NA	NA	NA	NA	24653722	24653065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24653100_24653700
ENSMUSG00000100940.2_0	chr1	-	336	2	FSM	ENSMUSG00000100940.2	ENST00000407532.2	358	2	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCTAACCTGCCAAATGT	NA	NA	NA	NA	NA	NA	NA	NA	87044862	87044050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_87044287_87044762
ENSMUSG00000100954.5_0	chr1	-	343	1	NIC	ENSMUSG00000100954.5	novel	366	2	NA	NA	18	-7	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATAGCTCTTTTCCTCAA	NA	NA	NA	NA	NA	NA	NA	NA	151220469	151220126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr1_-_151220100_151220500
ENSMUSG00000100967.2_0	chr15	-	8036	2	FSM	ENSMUSG00000100967.2	ENSMUST00000189185.2	8038	2	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCTAAGAGTTAATCTTG	NA	NA	NA	NA	NA	NA	NA	NA	84804239	84794640	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_84798533_84800095
ENSMUSG00000100969.8_0	chr19	-	1225	8	FSM	ENSMUSG00000100969.8	ENSMUST00000235916.2	1242	8	3	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAAACATTAAAAGGATTG	NA	NA	NA	NA	NA	NA	NA	NA	3247713	3195881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_3196266_3197632_3197683_3200763_3201022_3201506_3201700_3202027_3202095_3203930_3204010_3246944_3247030_3247604
ENSMUSG00000100975.3_0	chr12	-	1175	1	FSM	ENSMUSG00000100975.3	ENSMUST00000185486.3	1189	1	10	4	10	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	3027	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGAGATGCTGTGTGGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	104892938	104891763	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_104891800_104892900
ENSMUSG00000101009.7_0	chr14	+	481	2	FSM	ENSMUSG00000101009.7	ENSMUST00000189375.2	494	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGATCAAAGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	76910402	76924596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_76910455_76924167
ENSMUSG00000101009.7_1	chr14	+	428	1	ISM	ENSMUSG00000101009.7	ENSMUST00000189375.2	494	2	13766	13	4975	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGATCAAAGAAACCT	NA	NA	NA	NA	NA	NA	NA	NA	76924168	76924596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_76924200_76924600
ENSMUSG00000101013.2_0	chr5	+	7622	7	Genic_Genomic	ENSMUSG00000101013.2	novel	5410	1	NA	NA	-55398	-29	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAATAAAAAATGCTT	NA	NA	NA	NA	NA	NA	NA	NA	21100588	21161367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr5_+_21101902_21107287_21107456_21110779_21110921_21113104_21113247_21124526_21125159_21132615_21132729_21156254
ENSMUSG00000101013.2_3	chr5	+	5382	1	FSM	ENSMUSG00000101013.2	ENSMUST00000190567.2	5410	1	21	7	21	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTGAGCGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21156007	21161389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_21156000_21161400
ENSMUSG00000101026.2_0	chr15	-	281	2	FSM	ENSMUSG00000101026.2	ENST00000637396.2	291	2	4	6	4	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCGAGCTGCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	74647298	74643988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_74644179_74647207
ENSMUSG00000101026.2_1	chr15	-	190	1	ISM	ENSMUSG00000101026.2	ENSMUST00000191407.2	1494	2	6530	1231	3124	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTTCGAGCTGCCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	74644178	74643988	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_74644000_74644200
ENSMUSG00000101111.2_0	chr1	-	765	1	FSM	ENSMUSG00000101111.2	ENSMUST00000190277.2	783	1	14	4	14	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTACTCCCTTAGTATAA	NA	NA	NA	NA	NA	NA	NA	NA	24653038	24652273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24652300_24653000
ENSMUSG00000101122.2_0	chr1	+	797	1	FSM	ENSMUSG00000101122.2	ENSMUST00000190239.2	806	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	55105422	55106219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55105400_55106200
ENSMUSG00000101166.7_0	chr7	+	3607	4	FSM	ENSMUSG00000045411.17	ENSMUST00000107949.8	3610	4	3	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTAGGGTGTGCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	43896213	43901736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43897720_43898965_43899024_43899444_43899484_43899732
ENSMUSG00000101172.2_0	chr1	+	864	3	FSM	ENSMUSG00000101172.2	ENSMUST00000188069.2	885	3	16	5	16	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTACTTGCTTATTAT	NA	NA	NA	NA	NA	NA	NA	NA	93233701	93245026	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93233830_93234264_93234347_93244372
ENSMUSG00000101191.7_0	chr6	+	761	4	FSM	ENSMUSG00000101191.7	ENSMUST00000187542.7	782	4	13	8	13	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCTGTCTCAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125458338	125461633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125458438_125459526_125459666_125460403_125460533_125461239
ENSMUSG00000101249.2_0	chr1	-	473	1	FSM	ENSMUSG00000101249.2	ENSMUST00000187117.2	492	1	6	13	6	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAAATAAGAAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	24655272	24654799	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24654800_24655300
ENSMUSG00000101298.2_0	chr6	-	871	3	FSM	ENSMUSG00000000942.11	ENST00000467897.2	881	3	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	4204	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGGACAACTTTGCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	52190284	52167105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_52167610_52177816_52177919_52190019
ENSMUSG00000101355.2_0	chr13	+	388	1	FSM	ENSMUSG00000101355.2	ENSMUST00000188775.2	411	1	12	11	12	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGGCTTAAAGTTCGTCT	NA	NA	NA	NA	NA	NA	NA	NA	21901840	21902228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21901800_21902200
ENSMUSG00000101389.2_0	chr19	+	341	4	FSM	ENSMUSG00000101389.2	ENST00000532114.6	341	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCACTTTAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	11356209	11367728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_11356261_11358687_11358817_11363746_11363804_11367624
ENSMUSG00000101389.2_2	chr19	+	284	3	ISM	ENSMUSG00000101389.2	ENST00000532114.6	341	4	2484	0	2484	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTTCACTTTAATTTGA	NA	NA	NA	NA	NA	NA	NA	NA	11358693	11367728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_11358817_11363746_11363804_11367624
ENSMUSG00000101391.4_0	chr2	-	3908	2	ISM	ENSMUSG00000101391.4	ENSMUST00000216592.2	3992	3	2428	5	2428	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTGGAAGAAGAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	88857867	88851759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr2_-_88855438_88857637
ENSMUSG00000101391.4_1	chr2	-	3980	3	FSM	ENSMUSG00000101391.4	ENSMUST00000216592.2	3992	3	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTGAAATTGGAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	88860293	88851764	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_88855438_88857637_88857868_88860216
ENSMUSG00000101523.3_0	chr1	+	2615	1	FSM	ENSMUSG00000101523.3	ENSMUST00000190422.3	2633	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACGTTTGGTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	156351592	156354207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156351600_156354200
ENSMUSG00000101549.2_0	chr1	-	357	4	FSM	ENSMUSG00000101549.2	ENSMUST00000185761.2	359	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAATAATTTATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	132208149	132202455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_132202560_132202761_132202875_132207119_132207222_132208111
ENSMUSG00000101549.2_1	chr1	-	318	3	ISM	ENSMUSG00000101549.2	ENSMUST00000185761.2	359	4	929	2	929	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAATAATTTATTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	132207220	132202455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_132202560_132202761_132202875_132207119
ENSMUSG00000101609.3_0	chr7	-	93051	1	FSM	ENSMUSG00000101609.3	ENSMUST00000185789.3	93092	1	27	14	27	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCCACAAAACTACTTA	NA	NA	NA	NA	NA	NA	NA	NA	142850259	142757208	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_142757200_142850300
ENSMUSG00000101615.2_0	chr9	+	690	1	FSM	ENSMUSG00000101615.2	ENSMUST00000188740.2	694	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAACTGAGCTGGGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	96419213	96419903	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_96419200_96419900
ENSMUSG00000101645.2_10	chr2	-	5264	20	FSM	ENSMUSG00000101645.2	ENST00000674116.1	5283	20	13	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1552	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGAATACTACTAAGGGGC	NA	NA	NA	NA	NA	NA	NA	NA	84508374	84431243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443259_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84506440_84506502_84508194
ENSMUSG00000101645.2_4	chr2	-	5273	19	FSM	ENSMUSG00000034101.15	ENST00000673683.1	5296	19	12	11	12	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAATAAAAGTTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	84480653	84431152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_84433248_84433992_84434097_84435527_84435591_84438672_84438761_84439303_84439419_84439873_84440067_84440851_84441003_84441106_84441235_84442367_84442437_84443279_84443434_84444231_84444350_84445431_84445616_84446823_84447288_84450262_84450799_84451178_84451332_84452354_84452427_84454613_84454903_84456363_84456482_84480474
ENSMUSG00000101659.2_0	chr6	+	1220	3	FSM	ENSMUSG00000101659.2	ENST00000654905.1	1230	3	5	5	5	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTCCATGCTCTTCCAAT	NA	NA	NA	NA	NA	NA	NA	NA	126308723	126323012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_126308935_126311285_126311442_126322159
ENSMUSG00000101698.2_0	chr9	+	890	1	FSM	ENSMUSG00000101698.2	ENSMUST00000190113.2	904	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	88709582	88710472	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_88709600_88710500
ENSMUSG00000101746.2_0	chr1	-	689	3	FSM	ENSMUSG00000101746.2	ENSMUST00000189507.2	698	3	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATCATTTGAATTGTTA	NA	NA	NA	NA	NA	NA	NA	NA	177470503	177469110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_177469464_177469575_177469681_177470272
ENSMUSG00000101856.2_0	chr5	+	1451	1	FSM	ENSMUSG00000101856.2	ENSMUST00000188465.2	1454	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACGTCTCTGGTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	25735010	25736461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_25735000_25736500
ENSMUSG00000101892.2_0	chr15	-	1332	6	FSM	ENSMUSG00000101892.2	ENSMUST00000100655.5	1341	6	7	2	7	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTCAGCTGCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	57897704	57885656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_57885960_57888669_57888803_57892009_57892441_57894352_57894497_57895379_57895476_57897479
ENSMUSG00000101906.2_0	chr7	-	1492	1	FSM	ENSMUSG00000101906.2	ENSMUST00000188039.2	1516	1	18	6	18	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTGAGAGTCAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	47617924	47616432	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_47616400_47617900
ENSMUSG00000101939.2_0	chr1	-	332	1	FSM	ENSMUSG00000101939.2	ENSMUST00000188299.2	345	1	0	13	0	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATGAACAGAGTAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	24652200	24651868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24651900_24652200
ENSMUSG00000101970.9_0	chr7	-	765	5	FSM	ENSMUSG00000101970.9	ENSMUST00000184554.8	782	5	5	12	5	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTAAAAATTTCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	73207987	73193795	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_73194159_73199344_73199401_73205002_73205082_73205602_73205669_73207786
ENSMUSG00000102018.9_0	chr15	+	1809	14	FSM	ENSMUSG00000102018.9	ENSMUST00000187868.3	1810	14	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTGCACAATTCCAC	NA	NA	NA	NA	NA	NA	NA	NA	75881738	75918829	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75881795_75883184_75883274_75886751_75886839_75905986_75906121_75906297_75906463_75906539_75906732_75906799_75906926_75917157_75917298_75917392_75917448_75917554_75917648_75917909_75918019_75918122_75918217_75918290_75918426_75918495
ENSMUSG00000102018.9_2	chr15	+	1736	13	ISM	ENSMUSG00000102018.9	ENSMUST00000187868.3	1810	14	1458	6	1458	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGCATTTATGTGCACAAT	NA	NA	NA	NA	NA	NA	NA	NA	75883196	75918824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_75883274_75886751_75886839_75905986_75906121_75906297_75906463_75906539_75906732_75906799_75906926_75917157_75917298_75917392_75917448_75917554_75917648_75917909_75918019_75918122_75918217_75918290_75918426_75918495
ENSMUSG00000102070.2_0	chr1	-	662	1	FSM	ENSMUSG00000102070.2	ENSMUST00000188231.2	681	1	12	7	12	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATTTAATTTCACTATG	NA	NA	NA	NA	NA	NA	NA	NA	24654634	24653972	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_24654000_24654600
ENSMUSG00000102101.2_0	chr16	-	1332	1	FSM	ENSMUSG00000102101.2	ENSMUST00000186480.2	1350	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTCAATCCCGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	55794971	55793639	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_55793600_55795000
ENSMUSG00000102142.2_0	chr1	+	1221	1	FSM	ENSMUSG00000102142.2	ENSMUST00000194874.2	1244	1	16	7	16	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATTTAAAAAAAAACAAG	NA	NA	NA	NA	NA	NA	NA	NA	137859794	137861015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_137859800_137861000
ENSMUSG00000102145.2_0	chr1	+	5021	1	FSM	ENSMUSG00000102145.2	ENSMUST00000193928.2	5027	1	1	5	1	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACGAGAGAGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	55480063	55485084	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_55480100_55485100
ENSMUSG00000102172.2_0	chr1	-	2238	1	FSM	ENSMUSG00000102172.2	ENSMUST00000194571.2	2280	1	23	19	23	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAAAATAAAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	160477849	160475611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160475600_160477800
ENSMUSG00000102194.2_0	chr1	+	2529	1	FSM	ENSMUSG00000102194.2	ENSMUST00000191822.2	2539	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAGAAGGAGAAAGGTT	NA	NA	NA	NA	NA	NA	NA	NA	179848636	179851165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_179848600_179851200
ENSMUSG00000102224.6_0	chr9	+	1332	3	FSM	ENSMUSG00000102224.6	ENSMUST00000194140.2	1341	3	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTCTATTCTGAGATTCT	NA	NA	NA	NA	NA	NA	NA	NA	108014056	108015760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_108014341_108014615_108014766_108014862
ENSMUSG00000102252.6_0	chr7	-	1851	9	ISM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	5696	7	5696	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACTTATTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59649163	59632249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065
ENSMUSG00000102252.6_1	chr7	-	1922	10	FSM	ENSMUSG00000102252.6	ENSMUST00000059305.17	1932	10	3	7	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACTTATTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59654856	59632249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59654783
ENSMUSG00000102252.6_10	chr7	-	2076	11	FSM	ENSMUSG00000102252.6	ENSMUST00000098402.5	2076	11	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGACTTATTCTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59789967	59632249	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_59633026_59633116_59633243_59634772_59634912_59635578_59635732_59636519_59636632_59637159_59637312_59638349_59638496_59645153_59645303_59649065_59649162_59781997_59782146_59789888
ENSMUSG00000102312.2_129	chr18	+	5207	4	FSM	ENSMUSG00000103310.2	ENST00000531613.2	5223	4	13	3	13	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATGGTGGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	37153322	37320711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37155619_37289157_37289267_37292317_37292407_37317998
ENSMUSG00000102312.2_132	chr18	+	2132	4	FSM	ENSMUSG00000103310.2	ENST00000527624.1	2138	4	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATCGCATTTAACAGG	NA	NA	NA	NA	NA	NA	NA	NA	37153342	37318440	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37154885_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000102312.2_60	chr18	+	5175	4	FSM	ENSMUSG00000102206.6	ENST00000529310.6	5189	4	11	3	-8	1	multi-exon	FALSE	canonical	NA	NA	NA	NA	862	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCAATGGTGGTCATTTC	NA	NA	NA	NA	NA	NA	NA	NA	37143971	37320711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37146286_37289207_37289267_37292317_37292407_37317998
ENSMUSG00000102317.2_0	chr1	-	5422	1	FSM	ENSMUSG00000102317.2	ENSMUST00000194644.2	5440	1	18	0	18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAAAAAACATAATT	NA	NA	NA	NA	NA	NA	NA	NA	25730564	25725142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_25725100_25730600
ENSMUSG00000102325.2_0	chr1	+	2881	1	FSM	ENSMUSG00000102325.2	ENSMUST00000192862.2	2889	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGTCAAAATTAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	103652069	103654950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_103652100_103655000
ENSMUSG00000102404.2_0	chr1	+	1895	1	FSM	ENSMUSG00000102404.2	ENSMUST00000193511.2	1916	1	15	6	15	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGCTTGGCTCAGAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	153590414	153592309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_153590400_153592300
ENSMUSG00000102418.2_0	chr1	+	2531	4	FSM	ENSMUSG00000102418.2	ENSMUST00000179976.3	2544	4	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACTCAAGTGTGTTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	170104894	170114331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_170105079_170107352_170107417_170110703_170110867_170112211
ENSMUSG00000102422.2_4	chr3	+	2004	7	ISM	ENSMUSG00000027777.16	ENSMUST00000182719.8	2156	8	372	-16	6	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAACAAGCACTGGCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	68401912	68533812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_68402591_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000102422.2_5	chr3	+	1916	7	FSM	ENSMUSG00000027777.16	ENST00000412423.8	1942	7	9	17	9	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAATTAAAACTTT	NA	NA	NA	NA	NA	NA	NA	NA	68401915	68533766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_68402552_68503482_68503602_68523772_68523891_68524943_68525142_68525928_68526053_68528305_68528400_68533139
ENSMUSG00000102433.2_3	chr1	-	227	3	FSM	ENSMUSG00000102433.2	ENSMUST00000191904.2	238	3	1	10	1	-10	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTATCACTTTGAAATGA	NA	NA	NA	NA	NA	NA	NA	NA	173678345	173676724	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_173676833_173677778_173677812_173678259
ENSMUSG00000102440.2_0	chr18	+	4724	4	FSM	ENSMUSG00000102440.2	ENSMUST00000091935.7	4724	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37869988	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37872597_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102493.2_0	chr1	+	856	2	FSM	ENSMUSG00000102493.2	ENST00000366639.9	863	2	6	1	6	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAGCCCCACTCTGCTAA	NA	NA	NA	NA	NA	NA	NA	NA	177970880	177971836	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_177971355_177971454
ENSMUSG00000102543.6_0	chr18	+	4721	4	FSM	ENSMUSG00000102543.6	ENSMUST00000055935.11	4741	4	17	3	17	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37952582	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37955188_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102559.2_0	chr1	-	3084	1	FSM	ENSMUSG00000102559.2	ENSMUST00000195411.2	3106	1	22	0	22	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAAAACCAACAAC	NA	NA	NA	NA	NA	NA	NA	NA	66807868	66804784	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_66804800_66807900
ENSMUSG00000102581.2_0	chr3	-	2806	1	FSM	ENSMUSG00000102581.2	ENSMUST00000193458.2	2827	1	15	6	15	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTAGATGAAAAGAACTTC	NA	NA	NA	NA	NA	NA	NA	NA	33091188	33088382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_33088400_33091200
ENSMUSG00000102591.2_0	chr2	+	2652	1	FSM	ENSMUSG00000102591.2	ENSMUST00000194131.2	2660	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATTTGTCTTAGTCAGG	NA	NA	NA	NA	NA	NA	NA	NA	24478577	24481229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_24478600_24481200
ENSMUSG00000102599.2_0	chr2	+	3411	1	FSM	ENSMUSG00000102599.2	ENSMUST00000194293.2	3421	1	1	9	1	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTACCCAAAACAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	6484501	6487912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_6484500_6487900
ENSMUSG00000102615.2_0	chr8	-	4077	1	FSM	ENSMUSG00000102615.2	ENSMUST00000192473.2	4097	1	20	0	20	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTGTTTTGGTCATGG	NA	NA	NA	NA	NA	NA	NA	NA	15078402	15074325	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_15074300_15078400
ENSMUSG00000102633.2_0	chr1	+	2093	1	FSM	ENSMUSG00000102633.2	ENSMUST00000191648.2	2100	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGGCTCAGGAAAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	21304945	21307038	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_21304900_21307000
ENSMUSG00000102644.6_1	chr5	+	537	3	FSM	ENSMUSG00000102644.6	ENST00000380837.7	553	3	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGGAGGCTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	92111547	92117630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_92111645_92112954_92113164_92117399
ENSMUSG00000102644.6_6	chr5	+	440	2	ISM	ENSMUSG00000102644.6	ENST00000380837.7	553	3	1414	9	1414	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCAGGAGGCTGTAGTTT	NA	NA	NA	NA	NA	NA	NA	NA	92112954	92117630	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_92113164_92117399
ENSMUSG00000102651.2_0	chr1	-	2390	1	FSM	ENSMUSG00000102651.2	ENSMUST00000194804.2	2404	1	14	0	14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	138482432	138480042	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_138480000_138482400
ENSMUSG00000102687.2_0	chr1	-	907	1	FSM	ENSMUSG00000102687.2	ENSMUST00000192036.2	926	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119559380	119558473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_119558500_119559400
ENSMUSG00000102691.2_0	chr2	-	1849	1	FSM	ENSMUSG00000102691.2	ENSMUST00000194117.2	1873	1	24	0	24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAATTGTTTGCATT	NA	NA	NA	NA	NA	NA	NA	NA	13168410	13166561	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13166600_13168400
ENSMUSG00000102692.2_0	chr3	+	10773	20	FSM	ENSMUSG00000102692.2	ENSMUST00000191829.2	10783	20	9	1	9	-1	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGTCTCCCTTCCATTTA	NA	NA	NA	NA	NA	NA	NA	NA	83035263	83264515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_83037250_83146150_83146343_83155827_83156060_83176462_83176700_83177604_83178616_83181037_83181226_83182363_83182464_83187510_83187666_83188747_83189592_83192510_83192751_83207724_83207860_83208277_83208488_83211741_83212600_83223795_83223910_83232527_83232740_83234436_83234589_83253466_83253598_83255311_83255599_83258998_83259132_83261159
ENSMUSG00000102700.2_0	chr1	+	1733	1	FSM	ENSMUSG00000102700.2	ENSMUST00000195426.2	1746	1	9	4	9	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTGAAGAAAGGAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	89024803	89026536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89024800_89026500
ENSMUSG00000102715.2_0	chr3	-	1486	5	FSM	ENSMUSG00000102715.2	ENSMUST00000194629.2	1506	5	4	16	4	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAATAAAGTTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	50561668	50470863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_50471983_50503773_50503849_50531441_50531547_50537303_50537400_50561577
ENSMUSG00000102719.2_0	chr1	+	3818	1	FSM	ENSMUSG00000102719.2	ENSMUST00000194726.2	3841	1	19	4	19	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTGAAAAAAAAGATAATA	NA	NA	NA	NA	NA	NA	NA	NA	58836960	58840778	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_58837000_58840800
ENSMUSG00000102742.2_4	chr18	+	2272	4	FSM	ENSMUSG00000102918.2	ENST00000617641.4	2285	4	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	1179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37939474	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37939631_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102742.2_6	chr18	+	715	5	FSM	ENSMUSG00000102918.2	ENST00000617222.4	729	5	10	4	10	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCGTCCTTACTTGTACC	NA	NA	NA	NA	NA	NA	NA	NA	37939494	37973233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37939631_37941877_37942031_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102748.2_0	chr18	+	4652	4	FSM	ENSMUSG00000102748.2	ENSMUST00000195112.2	4661	4	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37822886	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37825423_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102802.4_0	chr6	+	5146	43	FSM	ENSMUSG00000102802.4	ENST00000477922.3	5162	43	7	9	6	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	1086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCATTGGTGAGTATGAA	NA	NA	NA	NA	NA	NA	NA	NA	40763880	40834720	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40763981_40768502_40768580_40773224_40773349_40773456_40773567_40773865_40774021_40774756_40774929_40776143_40776244_40777215_40777329_40779361_40779488_40781351_40781484_40781577_40781680_40790369_40790484_40791275_40791364_40792723_40792842_40796279_40796455_40796965_40797083_40800495_40800651_40800797_40800883_40801732_40801790_40802869_40802995_40803777_40803867_40806175_40806397_40807707_40807864_40808383_40808618_40809506_40809662_40810656_40810826_40811676_40811774_40813130_40813244_40813884_40814011_40815441_40815571_40817610_40817719_40819061_40819125_40819878_40820014_40821623_40821709_40822661_40822801_40830504_40830639_40830897_40830933_40831015_40831133_40832205_40832355_40832449_40832535_40833147_40833205_40833593_40833719_40834640
ENSMUSG00000102824.2_0	chr1	-	514	1	FSM	ENSMUSG00000102824.2	ENSMUST00000191699.2	381	1	-18	-115	-18	115	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	189010038	189009524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_189009500_189010000
ENSMUSG00000102840.2_0	chr1	-	1622	1	FSM	ENSMUSG00000102840.2	ENSMUST00000192600.2	1624	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTATAAGCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	191554105	191552483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_191552500_191554100
ENSMUSG00000102858.2_0	chr1	+	3437	1	FSM	ENSMUSG00000102858.2	ENSMUST00000193082.2	3452	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGCTGATAAAGGATTAC	NA	NA	NA	NA	NA	NA	NA	NA	180853849	180857286	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_180853800_180857300
ENSMUSG00000102862.2_0	chr3	+	285	2	FSM	ENSMUSG00000102862.2	ENSMUST00000195407.2	300	2	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTAATACAAGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	32665009	32667647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_32665150_32667502
ENSMUSG00000102869.3_0	chr2	-	4903	1	FSM	ENSMUSG00000102869.3	ENSMUST00000192863.3	4915	1	9	3	9	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2931	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGACTTGGGCGTCTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	156234890	156229987	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_156230000_156234900
ENSMUSG00000102918.2_0	chr18	+	4667	4	FSM	ENSMUSG00000102918.2	ENSMUST00000076807.7	4687	4	17	3	-5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37939479	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37942031_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000102976.7_0	chr1	-	4385	18	FSM	ENSMUSG00000102976.7	ENSMUST00000191896.6	4396	18	2	9	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCTTAGTTCTTATCAT	NA	NA	NA	NA	NA	NA	NA	NA	133589054	133547608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588974
ENSMUSG00000102976.7_1	chr1	-	4303	17	FSM	ENSMUSG00000094410.9	ENSMUST00000179598.4	10156	17	5919	-66	5919	66	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAATCCTTAGTTCTTAT	NA	NA	NA	NA	NA	NA	NA	NA	133583137	133547611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082
ENSMUSG00000102976.7_17	chr1	-	2911	19	ISM	ENSMUSG00000102976.7	ENST00000367212.7	3006	20	568	17	554	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133588502	133549260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133557231_133557301_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588313
ENSMUSG00000102976.7_18	chr1	-	2986	20	FSM	ENSMUSG00000102976.7	ENST00000367212.7	3006	20	3	17	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACTTAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133589067	133549260	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133557231_133557301_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133583082_133583137_133588313_133588504_133588993
ENSMUSG00000102976.7_3	chr1	-	5830	18	FSM	ENSMUSG00000102976.7	ENST00000367210.3	5852	18	12	10	12	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGAAATCCTTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	133589125	133547615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133557231_133557301_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133583137_133588974
ENSMUSG00000102976.7_4	chr1	-	4370	17	FSM	ENSMUSG00000116275.2	ENSMUST00000027736.13	4395	17	18	7	18	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAGGAAATCCTTAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	133589100	133547615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_133549540_133549854_133549923_133550721_133550889_133552220_133552549_133553585_133553669_133554504_133555009_133561499_133561599_133563734_133563795_133565086_133565198_133566270_133566352_133566570_133566688_133566777_133566982_133568349_133568474_133573464_133573585_133575073_133575268_133581710_133581771_133588974
ENSMUSG00000103009.2_0	chr2	-	1932	1	FSM	ENSMUSG00000103009.2	ENSMUST00000192413.2	1943	1	7	4	7	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAATTATTTGTGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	129041107	129039175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_129039200_129041100
ENSMUSG00000103030.2_0	chr1	-	1785	1	FSM	ENSMUSG00000103030.2	ENSMUST00000193614.2	1794	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGTTGCTTTGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	55092262	55090477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_55090500_55092300
ENSMUSG00000103034.2_0	chr3	+	461	1	FSM	ENSMUSG00000103034.2	ENSMUST00000192045.2	490	1	8	21	8	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGGTAAGCATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	5815873	5816334	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_5815900_5816300
ENSMUSG00000103037.2_0	chr18	+	4703	4	FSM	ENSMUSG00000103037.2	ENSMUST00000192931.2	4723	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37813305	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37815893_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103046.2_0	chr1	+	1616	1	FSM	ENSMUSG00000103046.2	ENSMUST00000194994.2	1639	1	13	10	13	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAGTAGCAAAAATTTAT	NA	NA	NA	NA	NA	NA	NA	NA	39031771	39033387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_39031800_39033400
ENSMUSG00000103053.2_0	chr3	+	1589	1	FSM	ENSMUSG00000103053.2	ENSMUST00000192296.2	1603	1	6	8	6	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCTAGACTCCCTTCTT	NA	NA	NA	NA	NA	NA	NA	NA	106496581	106498170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106496600_106498200
ENSMUSG00000103065.2_0	chr14	-	4526	1	FSM	ENSMUSG00000103065.2	ENSMUST00000193037.2	4540	1	14	0	14	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTCTATGAATATACCA	NA	NA	NA	NA	NA	NA	NA	NA	69519575	69515049	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69515000_69519600
ENSMUSG00000103071.2_0	chr1	+	1525	1	FSM	ENSMUSG00000103071.2	ENSMUST00000194594.2	1551	1	20	6	20	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATCAATCTTGTGCAGGT	NA	NA	NA	NA	NA	NA	NA	NA	44796121	44797646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_44796100_44797600
ENSMUSG00000103081.4_0	chr18	+	4608	4	FSM	ENSMUSG00000103081.4	ENSMUST00000195764.2	4615	4	7	0	7	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37894860	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37897353_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103088.2_0	chr18	+	4676	4	FSM	ENSMUSG00000103088.2	ENSMUST00000003599.9	4684	4	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37875151	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37877712_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103115.2_0	chr3	-	1274	1	FSM	ENSMUSG00000103115.2	ENSMUST00000193595.2	1290	1	6	10	6	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTCATCCGGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	88434656	88433382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88433400_88434700
ENSMUSG00000103144.2_0	chr18	+	4676	4	FSM	ENSMUSG00000103144.2	ENSMUST00000194190.2	4692	4	13	3	13	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37794858	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37797419_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103156.2_0	chr1	-	595	2	FSM	ENSMUSG00000103156.2	ENSMUST00000193209.2	600	2	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTCCAAGTACCACAGAC	NA	NA	NA	NA	NA	NA	NA	NA	180596217	180591062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_180591486_180596045
ENSMUSG00000103168.2_0	chr12	+	4825	4	FSM	ENSMUSG00000103168.2	ENSMUST00000195683.2	4827	4	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAAGATTTCGGTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	115226303	115251526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_115226372_115226444_115226548_115245357_115245602_115247116
ENSMUSG00000103168.2_1	chr12	+	4754	3	ISM	ENSMUSG00000103168.2	ENSMUST00000195683.2	4827	4	140	6	140	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACAGAAGATTTCGGTT	NA	NA	NA	NA	NA	NA	NA	NA	115226443	115251522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_115226548_115245357_115245602_115247116
ENSMUSG00000103175.2_0	chr2	+	4148	1	FSM	ENSMUSG00000103175.2	ENSMUST00000195599.2	4161	1	5	8	5	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGACCCAAAAGGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	32378004	32382152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_32378000_32382200
ENSMUSG00000103199.2_0	chr1	+	2563	1	FSM	ENSMUSG00000103199.2	ENSMUST00000192072.2	2563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAGAAAATAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	156282859	156285422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_156282900_156285400
ENSMUSG00000103232.2_0	chr2	-	1686	1	FSM	ENSMUSG00000103232.2	ENSMUST00000193081.2	1689	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATATAATTGTTGGTGATT	NA	NA	NA	NA	NA	NA	NA	NA	13245435	13243749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_13243700_13245400
ENSMUSG00000103234.2_0	chrY	-	5652	1	FSM	ENSMUSG00000103234.2	ENSMUST00000191652.2	5704	1	51	1	51	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCGGCCATCACTGGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	16696982	16691330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrY_-_16691300_16697000
ENSMUSG00000103270.2_0	chr1	+	3240	3	FSM	ENSMUSG00000103270.2	ENSMUST00000195134.2	3261	3	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGCCTGAAATAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	40810556	40824494	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_40813256_40819621_40819803_40824134
ENSMUSG00000103273.2_0	chr3	+	2539	1	FSM	ENSMUSG00000103273.2	ENSMUST00000192925.2	2544	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATCAAAGAAATAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	93213774	93216313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_93213800_93216300
ENSMUSG00000103285.2_0	chr2	-	1635	1	FSM	ENSMUSG00000103285.2	ENSMUST00000192167.2	1682	1	37	10	37	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATCTGAGCAGAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	155928174	155926539	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_155926500_155928200
ENSMUSG00000103308.6_0	chr1	-	551	3	FSM	ENSMUSG00000103308.6	ENSMUST00000193667.6	553	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGGTTGGTCAAGAATTA	NA	NA	NA	NA	NA	NA	NA	NA	184361670	184342478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_184342774_184347667_184347890_184361636
ENSMUSG00000103308.6_1	chr1	-	502	2	ISM	ENSMUSG00000103308.6	ENSMUST00000193667.6	553	3	13792	6	2290	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTGGGTTGGTCAAGA	NA	NA	NA	NA	NA	NA	NA	NA	184347878	184342482	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_184342774_184347667
ENSMUSG00000103309.2_0	chr18	-	2187	1	FSM	ENSMUSG00000103309.2	ENSMUST00000192003.2	2205	1	14	4	14	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGGATGTCATTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	37940961	37938774	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_37938800_37941000
ENSMUSG00000103331.2_0	chr6	+	1702	1	FSM	ENSMUSG00000103331.2	ENSMUST00000194958.2	1714	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCCAACACAAGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40003827	40005529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_40003800_40005500
ENSMUSG00000103332.2_0	chr18	+	4669	4	FSM	ENSMUSG00000103332.2	ENSMUST00000193869.2	4689	4	20	0	20	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37802025	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37804579_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103373.2_0	chr13	-	2372	1	FSM	ENSMUSG00000103373.2	ENSMUST00000195552.2	2390	1	18	0	18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATATGTGATTGACAAAT	NA	NA	NA	NA	NA	NA	NA	NA	48698491	48696119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_48696100_48698500
ENSMUSG00000103396.2_0	chr3	-	331	2	FSM	ENSMUSG00000103396.2	ENST00000649813.2	349	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGTTAAAAAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	71372983	71372431	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_71372621_71372841
ENSMUSG00000103400.3_0	chr1	-	2503	2	FSM	ENSMUSG00000103400.3	ENSMUST00000195518.3	2517	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCATCTTTATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	166208056	166205454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_166207901_166207999
ENSMUSG00000103400.3_1	chr1	-	2434	1	ISM	ENSMUSG00000103400.3	ENSMUST00000195518.3	2517	2	174	8	174	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAGCATCTTTATGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	166207888	166205454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_-_166205500_166207900
ENSMUSG00000103427.2_0	chr1	+	5214	1	FSM	ENSMUSG00000103427.2	ENSMUST00000194483.2	5222	1	5	3	5	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAACAAAGAAAAACAGA	NA	NA	NA	NA	NA	NA	NA	NA	137877164	137882378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_137877200_137882400
ENSMUSG00000103467.2_0	chr1	-	2592	1	FSM	ENSMUSG00000103467.2	ENSMUST00000191702.2	2621	1	21	8	21	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCATCAAGCCGCTGCCT	NA	NA	NA	NA	NA	NA	NA	NA	189648135	189645543	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_189645500_189648100
ENSMUSG00000103475.2_0	chr2	+	1822	1	FSM	ENSMUSG00000103475.2	ENSMUST00000195680.2	1844	1	17	5	17	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACACTGAAGAAAGGAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14350504	14352326	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_14350500_14352300
ENSMUSG00000103502.2_0	chr3	-	2995	1	FSM	ENSMUSG00000103502.2	ENSMUST00000192267.2	3009	1	8	6	8	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTCAGAAAGTTGTGGAG	NA	NA	NA	NA	NA	NA	NA	NA	62247945	62244950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_62245000_62247900
ENSMUSG00000103509.2_0	chr1	+	4021	1	FSM	ENSMUSG00000103509.2	ENSMUST00000194854.2	4028	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAGCAACTTTACCCATT	NA	NA	NA	NA	NA	NA	NA	NA	7218333	7222354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_7218300_7222400
ENSMUSG00000103567.2_0	chr18	+	4659	4	FSM	ENSMUSG00000103567.2	ENSMUST00000193414.2	4664	4	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37827434	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37829978_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103585.2_0	chr18	+	4642	4	FSM	ENSMUSG00000103585.2	ENSMUST00000195363.2	4665	4	23	0	23	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37853444	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37855971_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103593.2_0	chr8	+	2171	1	FSM	ENSMUSG00000103593.2	ENSMUST00000193908.2	2181	1	3	7	3	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGTGCACCATGATGA	NA	NA	NA	NA	NA	NA	NA	NA	84927500	84929671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_84927500_84929700
ENSMUSG00000103622.2_0	chr9	-	4043	1	FSM	ENSMUSG00000103622.2	ENSMUST00000191720.2	4069	1	18	8	18	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACACTATAACAAACTAGGA	NA	NA	NA	NA	NA	NA	NA	NA	92424904	92420861	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_92420900_92424900
ENSMUSG00000103630.2_0	chr1	-	2055	1	FSM	ENSMUSG00000103630.2	ENSMUST00000191873.2	2085	1	25	5	25	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGATATTAGAATGGCTA	NA	NA	NA	NA	NA	NA	NA	NA	52695026	52692971	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_52693000_52695000
ENSMUSG00000103669.2_0	chr1	-	645	1	FSM	ENSMUSG00000103669.2	ENSMUST00000194444.2	653	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTATTGCACAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	188943210	188942565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_188942600_188943200
ENSMUSG00000103672.2_0	chr9	+	5520	1	FSM	ENSMUSG00000103672.2	ENSMUST00000194716.2	5531	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTTTAACAAGAAGGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	100993904	100999424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100993900_100999400
ENSMUSG00000103677.2_0	chr18	+	4720	4	FSM	ENSMUSG00000103677.2	ENSMUST00000194418.2	4727	4	4	3	4	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37818266	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37820871_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103693.2_0	chr1	-	4298	2	FSM	ENSMUSG00000103693.2	ENSMUST00000195618.2	4321	2	0	23	0	-23	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAGAGAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	160154648	160149278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_160152923_160153994
ENSMUSG00000103696.2_0	chr1	+	5406	1	FSM	ENSMUSG00000103696.2	ENSMUST00000191628.2	5415	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACTTAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	59968850	59974256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_59968800_59974300
ENSMUSG00000103720.2_0	chr14	-	4533	1	FSM	ENSMUSG00000103720.2	ENSMUST00000193352.2	4540	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATCTCTATGAATATACCA	NA	NA	NA	NA	NA	NA	NA	NA	69737832	69733299	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_69733300_69737800
ENSMUSG00000103800.2_2	chr18	+	2266	3	NNC	ENSMUSG00000103800.2	novel	2269	2	NA	NA	0	-4	at_least_one_novel_splicesite	TRUE	canonical	NA	NA	NA	NA	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGGCCCACCGAAGACCG	NA	NA	NA	NA	NA	NA	NA	NA	37085835	37127801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_+_37086014_37113303_37113476_37125885
ENSMUSG00000103807.2_0	chr6	+	276	1	FSM	ENSMUSG00000103807.2	ENSMUST00000193743.2	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGCCCTACAGAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	41043812	41044088	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_41043800_41044100
ENSMUSG00000103839.2_0	chr1	-	2604	1	FSM	ENSMUSG00000103839.2	ENSMUST00000194925.2	2623	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATCAGTGTTTAAAGTGT	NA	NA	NA	NA	NA	NA	NA	NA	58425274	58422670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_58422700_58425300
ENSMUSG00000103897.2_0	chr18	+	4722	4	FSM	ENSMUSG00000103897.2	ENSMUST00000066149.9	4730	4	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGACCGCGTCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	37858763	37974923	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37861370_37958073_37958133_37966317_37966407_37972955
ENSMUSG00000103906.2_0	chr15	+	4783	1	FSM	ENSMUSG00000103906.2	ENSMUST00000192937.2	4801	1	12	6	12	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	142	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCATTAGCTACCCTGTT	NA	NA	NA	NA	NA	NA	NA	NA	75781595	75786378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_75781600_75786400
ENSMUSG00000103949.2_0	chr9	+	507	1	FSM	ENSMUSG00000103949.2	ENSMUST00000192207.2	521	1	0	14	0	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGTAAGAATAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	98653157	98653664	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_98653200_98653700
ENSMUSG00000103966.2_0	chr1	+	5950	1	FSM	ENSMUSG00000103966.2	ENSMUST00000193350.2	5959	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGAGCAAGGGTAGGCACA	NA	NA	NA	NA	NA	NA	NA	NA	132030105	132036055	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_132030100_132036100
ENSMUSG00000103998.2_0	chr3	+	2286	2	FSM	ENSMUSG00000103998.2	ENSMUST00000193926.2	2308	2	19	3	19	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAAATTTTATGTGGAC	NA	NA	NA	NA	NA	NA	NA	NA	31395179	31399426	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_31396765_31398725
ENSMUSG00000104022.2_0	chr1	+	903	2	FSM	ENSMUSG00000104022.2	ENSMUST00000192860.2	916	2	0	13	0	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATCTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	183201585	183203108	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_183201624_183202243
ENSMUSG00000104022.2_2	chr1	+	856	1	ISM	ENSMUSG00000104022.2	ENSMUST00000192860.2	916	2	659	21	659	-21	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATAAATAAATAAAT	NA	NA	NA	NA	NA	NA	NA	NA	183202244	183203100	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_183202200_183203100
ENSMUSG00000104028.2_0	chr3	-	1167	1	FSM	ENSMUSG00000104028.2	ENSMUST00000194132.2	1204	1	33	4	33	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTGATTCCAGAACCACT	NA	NA	NA	NA	NA	NA	NA	NA	92170748	92169581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_92169600_92170700
ENSMUSG00000104040.2_0	chr9	+	1489	1	FSM	ENSMUSG00000104040.2	ENSMUST00000192580.2	1513	1	19	5	19	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTAGTAGACTTAGTATT	NA	NA	NA	NA	NA	NA	NA	NA	104139322	104140811	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_104139300_104140800
ENSMUSG00000104046.2_0	chr1	+	2269	1	FSM	ENSMUSG00000104046.2	ENSMUST00000193241.2	2279	1	8	2	8	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	306	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCCCTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	5377969	5380238	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_5378000_5380200
ENSMUSG00000104060.2_0	chr1	-	2056	1	FSM	ENSMUSG00000104060.2	ENSMUST00000195400.2	2071	1	15	0	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAACCAAAAAGAAGACA	NA	NA	NA	NA	NA	NA	NA	NA	131306254	131304198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_131304200_131306300
ENSMUSG00000104063.2_2	chr18	+	2146	2	FSM	ENSMUSG00000104063.2	ENST00000612073.1	2164	2	12	6	12	-6	multi-exon	TRUE	canonical	NA	NA	NA	NA	833	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTCCCATGGTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	37884830	37897081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_37886357_37896461
ENSMUSG00000104082.3_0	chr3	+	435	4	FSM	ENSMUSG00000104082.3	ENST00000347063.9	451	4	9	7	9	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	3125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGTAGCCAGTATCGTTC	NA	NA	NA	NA	NA	NA	NA	NA	83722789	83737184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_83722886_83726856_83726971_83730529_83730664_83737093
ENSMUSG00000104114.2_0	chr1	+	2368	1	FSM	ENSMUSG00000104114.2	ENSMUST00000192974.2	2384	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATACGAAATAAAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	89411168	89413536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_89411200_89413500
ENSMUSG00000104121.2_0	chr1	+	2937	1	FSM	ENSMUSG00000104121.2	ENSMUST00000192326.2	2953	1	5	11	5	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAATACTGAAAACTACA	NA	NA	NA	NA	NA	NA	NA	NA	86728801	86731738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_86728800_86731700
ENSMUSG00000104159.2_0	chr17	-	3158	1	FSM	ENSMUSG00000104159.2	ENSMUST00000193280.2	3170	1	10	2	10	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGATCTGCGTCTTGGTGT	NA	NA	NA	NA	NA	NA	NA	NA	31754424	31751266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31751300_31754400
ENSMUSG00000104195.2_0	chr5	+	1346	1	FSM	ENSMUSG00000104195.2	ENSMUST00000192921.2	1364	1	18	0	18	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGTTGCACAGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	134205202	134206548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_134205200_134206500
ENSMUSG00000104208.2_0	chr9	-	316	1	ISM	ENSMUSG00000104208.2	ENSMUST00000192053.2	347	2	861	8	861	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAGCAAGAAGTTAA	NA	NA	NA	NA	NA	NA	NA	NA	108214611	108214295	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_108214300_108214600
ENSMUSG00000104222.2_0	chr6	+	2505	1	FSM	ENSMUSG00000104222.2	ENSMUST00000194706.2	2527	1	19	3	19	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ATAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	117693321	117695826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_117693300_117695800
ENSMUSG00000104241.2_0	chr3	-	301	1	FSM	ENSMUSG00000104241.2	ENSMUST00000194242.2	319	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATGACTAGACAGCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	51310574	51310273	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_51310300_51310600
ENSMUSG00000104253.2_0	chr1	+	3052	1	FSM	ENSMUSG00000104253.2	ENSMUST00000194699.2	3058	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAATAGCAATGTTAG	NA	NA	NA	NA	NA	NA	NA	NA	121255820	121258872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_121255800_121258900
ENSMUSG00000104273.2_0	chr9	+	1487	1	FSM	ENSMUSG00000104273.2	ENSMUST00000195338.2	1492	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTACTCTGTGTCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	72594505	72595992	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_72594500_72596000
ENSMUSG00000104301.4_0	chr3	-	2929	17	FSM	ENSMUSG00000104301.4	ENST00000647816.1	2951	17	11	11	11	-11	multi-exon	TRUE	canonical	NA	NA	NA	NA	781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAGCAATTGTGATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	75359098	75182309	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_75182426_75205412_75205560_75209113_75209218_75230905_75231092_75239547_75239746_75240496_75240685_75242504_75242667_75245058_75245158_75246708_75246840_75265653_75265770_75289221_75289387_75304174_75304409_75336595_75336745_75338387_75338556_75357199_75357375_75358125_75358303_75358684
ENSMUSG00000104384.2_0	chr3	+	2513	1	FSM	ENSMUSG00000104384.2	ENSMUST00000195487.2	2530	1	11	6	11	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGGGCAACCTAAGACAG	NA	NA	NA	NA	NA	NA	NA	NA	33337277	33339790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_33337300_33339800
ENSMUSG00000104392.2_0	chr9	+	2029	1	FSM	ENSMUSG00000104392.2	ENSMUST00000195535.2	2034	1	3	2	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTTGGTTTTGGTTATG	NA	NA	NA	NA	NA	NA	NA	NA	100991006	100993035	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_100991000_100993000
ENSMUSG00000104415.2_0	chr1	+	4133	1	FSM	ENSMUSG00000104415.2	ENSMUST00000192742.2	4142	1	1	8	1	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACAATTCATCCTTTTATG	NA	NA	NA	NA	NA	NA	NA	NA	182321721	182325854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_182321700_182325900
ENSMUSG00000104433.2_0	chr1	+	2438	1	FSM	ENSMUSG00000104433.2	ENSMUST00000195241.2	2470	1	29	3	29	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAAAATATGTGCATGTG	NA	NA	NA	NA	NA	NA	NA	NA	32749288	32751726	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_32749300_32751700
ENSMUSG00000104476.2_0	chr1	-	7187	1	FSM	ENSMUSG00000104476.2	ENSMUST00000192814.2	7217	1	17	13	17	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGAACAATAGTAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	45532195	45525008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_45525000_45532200
ENSMUSG00000104501.2_0	chr6	-	2794	1	FSM	ENSMUSG00000104501.2	ENSMUST00000193564.2	2802	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACCTCACTAGAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72728897	72726103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_72726100_72728900
ENSMUSG00000104503.2_0	chr1	-	4707	1	FSM	ENSMUSG00000104503.2	ENSMUST00000192396.2	4716	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGCTTGCTTTTCTTA	NA	NA	NA	NA	NA	NA	NA	NA	84802395	84797688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_84797700_84802400
ENSMUSG00000104523.2_0	chr1	-	432	2	FSM	ENSMUSG00000104523.2	ENSMUST00000192656.2	447	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGCCTGAGTGTTGAG	NA	NA	NA	NA	NA	NA	NA	NA	36145512	36144464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_36144523_36145138
ENSMUSG00000104546.2_0	chr3	+	1737	1	FSM	ENSMUSG00000104546.2	ENSMUST00000199418.2	1778	1	32	9	32	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGACAGTCACAAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	152091928	152093665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_152091900_152093700
ENSMUSG00000104587.2_0	chr5	+	1671	1	FSM	ENSMUSG00000104587.2	ENSMUST00000197020.2	1688	1	4	13	4	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATAGAAATAGAAACA	NA	NA	NA	NA	NA	NA	NA	NA	28782274	28783945	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_28782300_28783900
ENSMUSG00000104671.2_0	chr3	+	1308	1	FSM	ENSMUSG00000104671.2	ENSMUST00000196302.2	1319	1	5	6	5	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTCTAGTGTCCGTGT	NA	NA	NA	NA	NA	NA	NA	NA	102978494	102979802	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_102978500_102979800
ENSMUSG00000104713.5_0	chr5	-	4304	11	FSM	ENSMUSG00000104713.5	ENSMUST00000196520.2	2604	11	1	-1701	1	1701	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTAATTCTTTTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	105441561	105418575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_105421154_105422052_105422247_105422574_105422678_105423618_105423826_105424492_105424774_105425562_105425809_105427940_105428138_105428320_105428431_105436792_105436921_105438702_105438893_105441491
ENSMUSG00000104735.2_0	chr3	+	4173	1	FSM	ENSMUSG00000104735.2	ENSMUST00000198178.2	4176	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATTTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	53006423	53010596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_53006400_53010600
ENSMUSG00000104761.2_0	chr5	+	2291	1	FSM	ENSMUSG00000104761.2	ENSMUST00000197084.2	2297	1	6	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAGAGATGGAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	100946620	100948911	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_100946600_100948900
ENSMUSG00000104768.2_0	chr3	+	3849	3	FSM	ENSMUSG00000104768.2	ENSMUST00000199205.2	3895	3	33	13	33	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCAAAATGATAAATT	NA	NA	NA	NA	NA	NA	NA	NA	104316509	104324838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_104318484_104319662_104319749_104323049
ENSMUSG00000104786.2_0	chr3	+	553	3	FSM	ENSMUSG00000104786.2	ENSMUST00000196445.2	570	3	6	11	6	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAAGATTCTTCAGTT	NA	NA	NA	NA	NA	NA	NA	NA	148694793	148709656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_148694990_148706606_148706772_148709464
ENSMUSG00000104795.2_0	chr3	-	779	1	FSM	ENSMUSG00000104795.2	ENSMUST00000197075.2	795	1	16	0	16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96632620	96631841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_96631800_96632600
ENSMUSG00000104824.2_0	chr5	-	2832	5	FSM	ENSMUSG00000104824.2	ENSMUST00000196214.2	2864	5	30	2	30	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATGGGAAATAGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	26147349	26140790	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_26142951_26143693_26143878_26144512_26144657_26146012_26146173_26147165
ENSMUSG00000104864.2_0	chr3	+	222	1	FSM	ENSMUSG00000104864.2	ENSMUST00000197367.2	222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCAGGTTGAAGATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	159197054	159197276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_159197100_159197300
ENSMUSG00000104951.2_0	chr5	+	1543	1	FSM	ENSMUSG00000104951.2	ENSMUST00000200411.2	1566	1	12	11	12	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACATAAAATTTTAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	123248770	123250313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_123248800_123250300
ENSMUSG00000104960.2_0	chr3	-	432	3	FSM	ENSMUSG00000104960.2	ENSMUST00000196466.2	448	3	11	5	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	711	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAAGACTGTGTCCTGTTT	NA	NA	NA	NA	NA	NA	NA	NA	123302042	123301205	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_123301310_123301465_123301512_123301760
ENSMUSG00000104970.2_0	chr5	-	576	1	FSM	ENSMUSG00000104970.2	ENSMUST00000198052.2	594	1	16	2	16	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGAAGTCCTTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110379051	110378475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_110378500_110379100
ENSMUSG00000104973.2_0	chr3	-	2285	1	FSM	ENSMUSG00000104973.2	ENSMUST00000199690.2	2288	1	3	0	3	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104408920	104406635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104406600_104408900
ENSMUSG00000104988.2_0	chr9	-	2011	1	FSM	ENSMUSG00000104988.2	ENSMUST00000200140.2	2019	1	3	5	3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGATCCTGTTGCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	110083209	110081198	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_110081200_110083200
ENSMUSG00000105033.2_0	chr5	-	2068	1	FSM	ENSMUSG00000105033.2	ENSMUST00000198390.2	2094	1	16	10	16	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	107308421	107306353	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_107306400_107308400
ENSMUSG00000105044.2_0	chr5	-	606	1	FSM	ENSMUSG00000105044.2	ENSMUST00000197379.2	645	1	31	8	31	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATAGCCAGGGCTACATA	NA	NA	NA	NA	NA	NA	NA	NA	109981980	109981374	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_109981400_109982000
ENSMUSG00000105045.2_0	chr3	-	551	1	FSM	ENSMUSG00000105045.2	ENSMUST00000198343.2	562	1	4	7	4	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGAGTGAGACCTCAGTTTC	NA	NA	NA	NA	NA	NA	NA	NA	144331721	144331170	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_144331200_144331700
ENSMUSG00000105095.2_0	chr3	-	815	1	FSM	ENSMUSG00000105095.2	ENSMUST00000199608.2	822	1	4	3	4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAGAACATTTGCCTTGGC	NA	NA	NA	NA	NA	NA	NA	NA	36010402	36009587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_36009600_36010400
ENSMUSG00000105152.2_0	chr5	+	1433	2	FSM	ENSMUSG00000105152.2	ENSMUST00000198371.2	1436	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAACCCCACAGTCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	112797232	112799975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_112797453_112798762
ENSMUSG00000105176.2_0	chr3	+	5337	1	FSM	ENSMUSG00000105176.2	ENSMUST00000197014.2	5342	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTGGACTCCTAAAGTG	NA	NA	NA	NA	NA	NA	NA	NA	34124812	34130149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_34124800_34130100
ENSMUSG00000105201.2_0	chr3	-	2440	1	FSM	ENSMUSG00000105201.2	ENSMUST00000198192.2	2470	1	22	8	22	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATTACTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	157742024	157739584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_157739600_157742000
ENSMUSG00000105247.2_0	chr5	-	3640	1	FSM	ENSMUSG00000105247.2	ENSMUST00000199282.2	3656	1	16	0	16	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCCAGAAAGTGCTGGCC	NA	NA	NA	NA	NA	NA	NA	NA	45404633	45400993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_45401000_45404600
ENSMUSG00000105263.2_0	chr5	+	5277	1	FSM	ENSMUSG00000105263.2	ENSMUST00000200473.2	5292	1	10	5	10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	738	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	44295331	44300608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_44295300_44300600
ENSMUSG00000105270.2_0	chr5	-	2927	1	FSM	ENSMUSG00000105270.2	ENSMUST00000197875.2	2958	1	31	0	31	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGGATTGGACATCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	145443833	145440906	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_145440900_145443800
ENSMUSG00000105272.2_0	chr3	+	2009	1	FSM	ENSMUSG00000105272.2	ENSMUST00000197233.2	2032	1	20	3	20	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGATTCAAGCAACTAGC	NA	NA	NA	NA	NA	NA	NA	NA	106474940	106476949	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_106474900_106476900
ENSMUSG00000105303.2_0	chr5	+	559	1	FSM	ENSMUSG00000105303.2	ENSMUST00000197935.2	584	1	22	3	22	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAGTGTTGCCACAGATG	NA	NA	NA	NA	NA	NA	NA	NA	109621283	109621842	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_109621300_109621800
ENSMUSG00000105304.2_0	chr3	-	6052	1	FSM	ENSMUSG00000105304.2	ENSMUST00000199385.2	6071	1	8	11	8	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAGAAAGAAGATAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	104384038	104377986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104378000_104384000
ENSMUSG00000105353.2_0	chr5	+	219	1	FSM	ENSMUSG00000105353.2	ENSMUST00000198677.2	302	1	59	24	59	-24	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATGAGCAGAGAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	44294020	44294239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_44294000_44294200
ENSMUSG00000105366.2_0	chr5	+	2169	1	FSM	ENSMUSG00000105366.2	ENSMUST00000200088.2	2199	1	24	6	24	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCATGTCCTTTGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	13654026	13656195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_13654000_13656200
ENSMUSG00000105402.5_0	chr5	-	2870	4	FSM	ENSMUSG00000105402.5	ENSMUST00000198582.5	2879	4	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGTTTTGTTTGTTTG	NA	NA	NA	NA	NA	NA	NA	NA	64768034	64751199	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_64753667_64759324_64759493_64767442_64767499_64767855
ENSMUSG00000105416.2_0	chr5	+	1625	1	FSM	ENSMUSG00000105416.2	ENSMUST00000196390.2	1629	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGTTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	43216601	43218226	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_43216600_43218200
ENSMUSG00000105434.2_0	chr5	-	2185	1	FSM	ENSMUSG00000105434.2	ENSMUST00000197944.2	2200	1	9	6	9	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGCTTTAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122623053	122620868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_122620900_122623100
ENSMUSG00000105447.2_0	chr3	+	1591	2	FSM	ENSMUSG00000105447.2	ENSMUST00000198136.2	1608	2	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACATTGAAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	127630570	127632287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_127630692_127630817
ENSMUSG00000105453.2_0	chr5	-	2527	1	FSM	ENSMUSG00000105453.2	ENSMUST00000198772.2	2546	1	17	2	17	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCACCTGACTCTGGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	140017914	140015387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140015400_140017900
ENSMUSG00000105454.2_0	chr5	-	1058	1	FSM	ENSMUSG00000105454.2	ENSMUST00000198760.2	1067	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATACCTAATTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	48949308	48948250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_48948200_48949300
ENSMUSG00000105509.2_0	chr3	+	3677	1	FSM	ENSMUSG00000105509.2	ENSMUST00000197569.2	3692	1	10	5	10	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTTTTTCACACTTCT	NA	NA	NA	NA	NA	NA	NA	NA	110157340	110161017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_110157300_110161000
ENSMUSG00000105518.2_1	chr3	+	443	2	ISM	ENSMUSG00000001020.9	ENSMUST00000001046.7	498	3	1236	9	1236	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTATTAGCTGTTGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90512313	90513343	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_90512460_90513046
ENSMUSG00000105528.2_0	chr5	+	1858	1	FSM	ENSMUSG00000105528.2	ENSMUST00000197239.2	1872	1	1	13	1	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGGAACATACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14077908	14079766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_14077900_14079800
ENSMUSG00000105549.2_0	chr5	+	3821	1	FSM	ENSMUSG00000105549.2	ENSMUST00000196320.2	3848	1	23	4	23	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCCAAAACCTAAGATACC	NA	NA	NA	NA	NA	NA	NA	NA	11510413	11514234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_11510400_11514200
ENSMUSG00000105655.2_0	chr3	-	1724	1	FSM	ENSMUSG00000105655.2	ENSMUST00000196955.2	1754	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104745469	104743745	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104743700_104745500
ENSMUSG00000105676.2_0	chr3	-	1760	1	FSM	ENSMUSG00000105676.2	ENSMUST00000198011.2	1786	1	17	9	17	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACATGTGAGTTCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	137570118	137568358	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_137568400_137570100
ENSMUSG00000105689.2_0	chr3	-	654	3	FSM	ENSMUSG00000105689.2	ENSMUST00000196228.2	667	3	12	1	12	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTGTTTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99168589	99162014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_99162497_99165840_99165940_99168516
ENSMUSG00000105689.2_1	chr3	-	572	2	ISM	ENSMUSG00000105689.2	ENSMUST00000196228.2	667	3	2671	1	2671	-1	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAAGTGTTTTGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	99165930	99162014	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_-_99162497_99165840
ENSMUSG00000105699.2_0	chr5	-	736	1	FSM	ENSMUSG00000105699.2	ENSMUST00000200523.2	763	1	23	4	23	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGTATGACGCCTCGGT	NA	NA	NA	NA	NA	NA	NA	NA	140592283	140591547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_140591500_140592300
ENSMUSG00000105710.2_0	chr3	-	1375	1	FSM	ENSMUSG00000105710.2	ENSMUST00000200075.2	1412	1	24	13	24	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAAAAGTCGAAATATA	NA	NA	NA	NA	NA	NA	NA	NA	152090830	152089455	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_152089500_152090800
ENSMUSG00000105750.2_0	chr5	+	3892	1	FSM	ENSMUSG00000105750.2	ENSMUST00000197721.2	3907	1	15	0	15	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATCAAAAAAATTTCA	NA	NA	NA	NA	NA	NA	NA	NA	13531009	13534901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_13531000_13534900
ENSMUSG00000105753.2_0	chr3	+	1925	1	FSM	ENSMUSG00000105753.2	ENSMUST00000200070.2	1940	1	2	13	2	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATCAAAAACAAACAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	105410224	105412149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105410200_105412100
ENSMUSG00000105837.5_0	chr3	-	654	3	FSM	ENSMUSG00000105837.5	ENSMUST00000197370.5	655	3	0	1	0	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGAACCCATTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	129325758	129321116	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_129321464_129324707_129324814_129325557
ENSMUSG00000105852.5_0	chr3	+	2538	17	ISM	ENSMUSG00000105852.5	ENSMUST00000167642.8	2566	18	0	3251	0	-3251	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACACTTGTTCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	105866818	105888665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478_105874676_105881728_105882360_105883286_105883344_105884979_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548
ENSMUSG00000105852.5_1	chr3	+	2538	18	FSM	ENSMUSG00000105852.5	ENSMUST00000167642.8	2566	18	24	4	24	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAACCAGGAAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	105866842	105891912	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_105867015_105867268_105867455_105868932_105869075_105869330_105869381_105871757_105871829_105871938_105871994_105872396_105872469_105873080_105873190_105873672_105873742_105874478_105874676_105881728_105882360_105883286_105883344_105884979_105885146_105885589_105885715_105887213_105887323_105887407_105887594_105888548_105888666_105891888
ENSMUSG00000105854.2_0	chr5	-	756	1	FSM	ENSMUSG00000105854.2	ENSMUST00000197212.2	763	1	4	3	4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTGCAACAAATAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	12529591	12528835	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_12528800_12529600
ENSMUSG00000105941.2_0	chr3	+	1114	1	FSM	ENSMUSG00000105941.2	ENSMUST00000198429.2	1138	1	11	13	11	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAACACACTGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	89820233	89821347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89820200_89821300
ENSMUSG00000105962.2_0	chr9	+	1605	1	FSM	ENSMUSG00000105962.2	ENSMUST00000197902.2	1617	1	3	9	3	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACACAGTACAATTTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	109870250	109871855	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_109870200_109871900
ENSMUSG00000105987.5_0	chr5	-	2775	3	ISM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	1515	5	-726	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	1102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	23916149	23905651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_23908348_23915363_23915407_23916113
ENSMUSG00000105987.5_1	chr5	-	2799	4	FSM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	23917664	23905651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_23908348_23915363_23915407_23916113_23916149_23917639
ENSMUSG00000105987.5_2	chr5	-	2739	2	ISM	ENSMUSG00000105987.5	ENSMUST00000199941.5	2804	4	2258	5	17	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	23915406	23905651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_23908348_23915363
ENSMUSG00000105987.5_3	chr5	-	2698	1	NIC	ENSMUSG00000105987.5	novel	2804	4	NA	NA	7074	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	134	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGAATCGTGGTCTCGCT	NA	NA	NA	NA	NA	NA	NA	NA	23908349	23905651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_-_23905700_23908300
ENSMUSG00000106001.2_0	chr3	-	2616	1	FSM	ENSMUSG00000106001.2	ENSMUST00000197548.2	2639	1	21	2	21	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAATGTCAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	125013181	125010565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_125010600_125013200
ENSMUSG00000106035.2_0	chr5	-	2765	1	FSM	ENSMUSG00000106035.2	ENSMUST00000196765.2	2779	1	6	8	6	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGGGCATGGTGGTGCA	NA	NA	NA	NA	NA	NA	NA	NA	104195257	104192492	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_104192500_104195300
ENSMUSG00000106044.3_0	chr5	-	3984	1	FSM	ENSMUSG00000106044.3	ENSMUST00000196492.3	3991	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGTAAGAATAAAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	60965049	60961065	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_60961100_60965000
ENSMUSG00000106086.2_0	chr3	-	3057	1	FSM	ENSMUSG00000106086.2	ENSMUST00000196419.2	3065	1	3	5	3	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAACGAATCGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	130905736	130902679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_130902700_130905700
ENSMUSG00000106115.2_0	chr5	+	1838	1	FSM	ENSMUSG00000106115.2	ENSMUST00000198012.2	1857	1	6	13	6	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACAACCAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121540726	121542564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121540700_121542600
ENSMUSG00000106157.2_0	chr3	+	1542	2	FSM	ENSMUSG00000106157.2	ENSMUST00000196052.2	1556	2	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACTCAAGGTTTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	150999804	151001934	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_150999927_151000514
ENSMUSG00000106164.2_0	chr5	+	1123	2	FSM	ENSMUSG00000106164.2	ENSMUST00000198824.2	1178	2	40	15	40	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAATATATAAT	NA	NA	NA	NA	NA	NA	NA	NA	101851491	101853701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_101851977_101853063
ENSMUSG00000106181.2_0	chr5	-	94	1	FSM	ENSMUSG00000106181.2	ENSMUST00000199146.2	1159	1	1059	6	1059	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTGAAAGTGTTAGCC	NA	NA	NA	NA	NA	NA	NA	NA	22898658	22898564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_22898600_22898700
ENSMUSG00000106190.3_0	chr5	-	2316	1	FSM	ENSMUSG00000106190.3	ENSMUST00000199527.3	2336	1	13	7	13	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGGATGAGTGAGTTGT	NA	NA	NA	NA	NA	NA	NA	NA	137222820	137220504	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_137220500_137222800
ENSMUSG00000106194.2_0	chr3	+	554	3	FSM	ENSMUSG00000106194.2	ENSMUST00000196200.2	559	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTAGTTTCTGGGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	122358698	122368384	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_122358738_122360174_122360480_122368174
ENSMUSG00000106194.2_1	chr3	+	504	2	ISM	ENSMUSG00000106194.2	ENSMUST00000196200.2	559	3	1483	9	1483	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATGTAGTTTCTGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	122360181	122368380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_122360480_122368174
ENSMUSG00000106205.2_0	chr5	+	1702	1	FSM	ENSMUSG00000106205.2	ENSMUST00000198074.2	1722	1	12	8	12	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACATTTGAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	64961368	64963070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_64961400_64963100
ENSMUSG00000106211.2_0	chr3	-	2994	1	FSM	ENSMUSG00000106211.2	ENSMUST00000197736.2	3004	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTTGGGGCCGGAACAT	NA	NA	NA	NA	NA	NA	NA	NA	56033570	56030576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_56030600_56033600
ENSMUSG00000106218.2_0	chr3	-	1881	2	FSM	ENSMUSG00000106218.2	ENSMUST00000198251.2	1896	2	15	0	15	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAATAAATAAATA	NA	NA	NA	NA	NA	NA	NA	NA	88807293	88752331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_88753898_88806978
ENSMUSG00000106224.2_0	chr3	-	1798	1	FSM	ENSMUSG00000106224.2	ENSMUST00000197391.2	1808	1	6	4	6	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACACTTGTCGCTGAGA	NA	NA	NA	NA	NA	NA	NA	NA	121517045	121515247	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_121515200_121517000
ENSMUSG00000106251.2_0	chr3	-	1562	1	FSM	ENSMUSG00000106251.2	ENSMUST00000197199.2	1575	1	0	13	0	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACACATATACATATACAT	NA	NA	NA	NA	NA	NA	NA	NA	104735220	104733658	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104733700_104735200
ENSMUSG00000106290.2_0	chr3	+	2233	1	FSM	ENSMUSG00000106290.2	ENSMUST00000197889.2	2251	1	4	14	4	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAATATATAGTAATTA	NA	NA	NA	NA	NA	NA	NA	NA	135566112	135568345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_135566100_135568300
ENSMUSG00000106313.2_0	chr3	-	385	1	FSM	ENSMUSG00000106313.2	ENSMUST00000196849.2	388	1	1	2	1	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAGAGCCATATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	132361542	132361157	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_132361200_132361500
ENSMUSG00000106339.2_0	chr5	+	972	1	FSM	ENSMUSG00000106339.2	ENSMUST00000196810.2	993	1	16	5	16	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACATTATGAATAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	16777964	16778936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16778000_16778900
ENSMUSG00000106361.2_0	chr3	+	2071	3	FSM	ENSMUSG00000106361.2	ENSMUST00000198898.2	2074	3	1	2	1	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATATTTTGGTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	144677885	144688319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_144677944_144686191_144686497_144686611
ENSMUSG00000106361.2_1	chr3	+	1994	2	ISM	ENSMUSG00000106361.2	ENSMUST00000198898.2	2074	3	8326	2	8326	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATATTTTGGTCATGCT	NA	NA	NA	NA	NA	NA	NA	NA	144686210	144688319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr3_+_144686497_144686611
ENSMUSG00000106375.2_0	chr5	+	4642	1	FSM	ENSMUSG00000106375.2	ENSMUST00000196562.2	4690	1	18	30	18	-30	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAGGAAAGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122634239	122638881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_122634200_122638900
ENSMUSG00000106411.2_0	chr5	+	2884	1	FSM	ENSMUSG00000106411.2	ENSMUST00000196996.2	2893	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAGTATCAAAATGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	14661665	14664549	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_14661700_14664500
ENSMUSG00000106415.2_0	chr3	-	1493	2	FSM	ENSMUSG00000106415.2	ENSMUST00000198035.2	1502	2	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTCTCAGGTGGCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	116424624	116422821	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_116422954_116423263
ENSMUSG00000106427.2_0	chr3	+	3054	1	FSM	ENSMUSG00000106427.2	ENSMUST00000200084.2	3063	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACACCAAAAAAAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	98028907	98031961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_98028900_98032000
ENSMUSG00000106443.2_0	chr3	-	4188	1	FSM	ENSMUSG00000106443.2	ENSMUST00000199515.2	4217	1	24	5	24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAACAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104047293	104043105	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_104043100_104047300
ENSMUSG00000106549.2_0	chr5	+	2832	1	FSM	ENSMUSG00000106549.2	ENSMUST00000200644.2	2839	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTATTAGAAAAGATCATC	NA	NA	NA	NA	NA	NA	NA	NA	70718607	70721439	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_70718600_70721400
ENSMUSG00000106579.2_0	chr5	-	2468	1	FSM	ENSMUSG00000106579.2	ENSMUST00000198342.2	2486	1	8	10	8	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCATTTTAGTTAAAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	49379495	49377027	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_49377000_49379500
ENSMUSG00000106590.2_0	chr5	+	2205	1	FSM	ENSMUSG00000106590.2	ENSMUST00000198656.2	2214	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGCCCTATGGGAATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	121731761	121733966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_121731800_121734000
ENSMUSG00000106607.2_0	chr5	-	1376	1	FSM	ENSMUSG00000106607.2	ENSMUST00000197257.2	1386	1	8	2	8	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAATAAAGAATATAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	52333089	52331713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_52331700_52333100
ENSMUSG00000106646.2_0	chr5	+	1735	1	FSM	ENSMUSG00000106646.2	ENSMUST00000197556.2	1742	1	4	3	4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAAAAAAAATACTCAAA	NA	NA	NA	NA	NA	NA	NA	NA	58204676	58206411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_58204700_58206400
ENSMUSG00000106688.2_0	chr5	-	1393	1	FSM	ENSMUSG00000106688.2	ENSMUST00000201325.2	1411	1	10	8	10	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATCTTAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	34106324	34104931	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_34104900_34106300
ENSMUSG00000106694.2_0	chr5	-	3350	1	FSM	ENSMUSG00000106694.2	ENSMUST00000200788.2	3390	1	40	0	40	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAATCGTGTCATGATAT	NA	NA	NA	NA	NA	NA	NA	NA	130896638	130893288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_130893300_130896600
ENSMUSG00000106709.2_0	chr6	+	513	2	FSM	ENSMUSG00000106709.2	ENSMUST00000202675.2	524	2	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAAGACAAGTTCTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21852416	21853471	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21852726_21853267
ENSMUSG00000106714.2_0	chr5	+	2578	1	FSM	ENSMUSG00000106714.2	ENSMUST00000201584.2	2592	1	11	3	11	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTAGTCAGTGCCACTC	NA	NA	NA	NA	NA	NA	NA	NA	117437964	117440542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_117438000_117440500
ENSMUSG00000106734.4_0	chr6	-	2973	3	FSM	ENSMUSG00000106734.4	ENSMUST00000201831.4	2993	3	11	9	-2	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATATTGAAATCTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	3346060	3333202	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_3335889_3342595_3342675_3345852
ENSMUSG00000106766.2_0	chr5	-	1459	1	FSM	ENSMUSG00000106766.2	ENSMUST00000200749.2	1463	1	1	3	1	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAATGCTTTTATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	116519693	116518234	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_116518200_116519700
ENSMUSG00000106820.2_0	chr5	+	1053	3	FSM	ENSMUSG00000106820.2	ENSMUST00000201128.2	1081	3	28	0	28	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGAGTTGTCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	147355438	147359854	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147355512_147357439_147357607_147359041
ENSMUSG00000106826.2_0	chr6	+	6676	1	FSM	ENSMUSG00000106826.2	ENSMUST00000202678.2	6700	1	17	7	17	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACCAAATAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21258936	21265612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_21258900_21265600
ENSMUSG00000106831.2_0	chr5	-	427	1	FSM	ENSMUSG00000106831.2	ENSMUST00000201768.2	459	1	17	15	17	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAACAATATTTAAGTCGA	NA	NA	NA	NA	NA	NA	NA	NA	76380900	76380473	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_76380500_76380900
ENSMUSG00000106863.4_0	chr5	-	594	4	FSM	ENSMUSG00000106863.4	ENSMUST00000200783.2	594	4	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGCTCTTGGGGCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90736936	90718957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_90719113_90728971_90729039_90732594_90732832_90736801
ENSMUSG00000106864.4_0	chr5	-	4536	19	FSM	ENSMUSG00000106864.4	ENSMUST00000088010.12	4552	19	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCAGAGGAGCTTGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31337478	31313354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31331111_31331434_31331575_31331840_31337227
ENSMUSG00000106864.4_9	chr5	-	4178	21	FSM	ENSMUSG00000106864.4	ENSMUST00000202639.4	4200	21	15	7	15	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGAAAGTATTTAGAACCC	NA	NA	NA	NA	NA	NA	NA	NA	31337446	31313871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31315112_31315486_31315595_31315686_31315840_31316404_31316534_31316777_31316866_31317043_31317206_31317291_31317437_31323229_31323360_31323704_31323731_31325039_31325149_31325332_31325445_31325594_31325823_31326394_31326494_31327179_31327258_31327523_31327619_31330125_31330406_31330726_31330856_31331111_31331434_31331575_31331840_31333838_31333901_31337227
ENSMUSG00000106874.2_0	chr6	-	736	2	FSM	ENSMUSG00000106874.2	ENSMUST00000201775.2	737	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCCCGTCTCTTGTTAAC	NA	NA	NA	NA	NA	NA	NA	NA	18846761	18845908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_18846507_18846623
ENSMUSG00000106891.2_0	chr5	+	1032	1	FSM	ENSMUSG00000106891.2	ENSMUST00000202491.2	1057	1	15	10	15	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGAAACGTGACAAACGG	NA	NA	NA	NA	NA	NA	NA	NA	147365654	147366686	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147365700_147366700
ENSMUSG00000106918.4_0	chr5	+	466	4	FSM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	1995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTATACTCTTGTCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	31771286	31779980	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31771367_31771946_31771966_31773724_31773832_31779720
ENSMUSG00000106918.4_5	chr5	+	383	3	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	664	11	664	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAGTCTATACTCTTGTCT	NA	NA	NA	NA	NA	NA	NA	NA	31771946	31779977	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_31771966_31773724_31773832_31779720
ENSMUSG00000106918.4_6	chr5	+	365	2	ISM	ENSMUSG00000106918.4	ENSMUST00000031024.14	478	4	2442	10	2442	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTCTATACTCTTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	31773724	31779978	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_31773832_31779720
ENSMUSG00000106943.3_0	chr5	+	2306	1	FSM	ENSMUSG00000106943.3	ENSMUST00000066220.4	2346	1	38	2	21	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAACACAAGACAGGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	74253758	74256064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_74253800_74256100
ENSMUSG00000106951.2_0	chr5	-	3976	2	FSM	ENSMUSG00000106951.2	ENSMUST00000145042.2	3994	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCCAAATTGTGTCAAC	NA	NA	NA	NA	NA	NA	NA	NA	148932022	148926872	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148930754_148931927
ENSMUSG00000106951.2_1	chr5	-	3880	1	NIC	ENSMUSG00000106951.2	novel	3994	2	NA	NA	1278	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAACTCCAAATTGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	148930755	148926875	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr5_-_148926900_148930800
ENSMUSG00000106959.2_0	chr6	-	3928	1	FSM	ENSMUSG00000106959.2	ENSMUST00000202669.2	3933	1	3	2	3	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAAAACAAAAAAAAATAAT	NA	NA	NA	NA	NA	NA	NA	NA	28237009	28233081	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_28233100_28237000
ENSMUSG00000106985.2_0	chr5	+	734	2	FSM	ENSMUSG00000106985.2	ENSMUST00000201899.2	738	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAGGTGAGAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	77633573	77642204	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_77633879_77641775
ENSMUSG00000107000.2_0	chr5	-	3660	1	FSM	ENSMUSG00000107000.2	ENSMUST00000201715.2	3672	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAATCCTAAACTAAC	NA	NA	NA	NA	NA	NA	NA	NA	134299590	134295930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_134295900_134299600
ENSMUSG00000107002.2_0	chr16	-	1436	1	FSM	ENSMUSG00000107002.2	ENSMUST00000202722.2	1445	1	8	1	8	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	617	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	31767304	31765868	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_31765900_31767300
ENSMUSG00000107023.3_0	chr7	+	1042	3	FSM	ENSMUSG00000106715.4	ENSMUST00000084563.11	1054	3	4	8	4	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTGAAATATTGTCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	127160565	127164434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127160958_127162293_127162465_127163955
ENSMUSG00000107050.2_0	chr5	-	2315	1	FSM	ENSMUSG00000107050.2	ENSMUST00000202959.2	2331	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTAAGGACAAAAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	65839678	65837363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_65837400_65839700
ENSMUSG00000107121.2_0	chr5	-	763	1	FSM	ENSMUSG00000107121.2	ENSMUST00000201728.2	768	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAAAGTTGACATTAGT	NA	NA	NA	NA	NA	NA	NA	NA	115769875	115769112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_115769100_115769900
ENSMUSG00000107134.2_0	chr5	-	3394	1	FSM	ENSMUSG00000107134.2	ENSMUST00000200697.2	3418	1	13	11	13	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTACATTATATAATAACC	NA	NA	NA	NA	NA	NA	NA	NA	39767674	39764280	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_39764300_39767700
ENSMUSG00000107151.2_0	chr5	+	203	1	FSM	ENSMUSG00000107151.2	ENSMUST00000201018.2	232	1	19	10	19	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCAAGAACTCTACAATT	NA	NA	NA	NA	NA	NA	NA	NA	31865758	31865961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_31865800_31866000
ENSMUSG00000107164.2_0	chr5	+	1697	1	FSM	ENSMUSG00000107164.2	ENSMUST00000201035.2	1721	1	18	6	18	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTACCGTCTTAGTTA	NA	NA	NA	NA	NA	NA	NA	NA	149365343	149367040	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_149365300_149367000
ENSMUSG00000107195.2_0	chr5	+	887	1	FSM	ENSMUSG00000107195.2	ENSMUST00000200768.2	920	1	23	10	23	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAATCTGACAACAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65650461	65651348	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_65650500_65651300
ENSMUSG00000107230.2_0	chr6	+	892	3	FSM	ENSMUSG00000107230.2	ENSMUST00000201818.2	894	3	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAAGGTGTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	85938606	85978908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_85938994_85942613_85943003_85978792
ENSMUSG00000107276.2_0	chr5	-	1703	1	FSM	ENSMUSG00000107276.2	ENSMUST00000202512.2	1704	1	1	0	1	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTCTGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	38293440	38291737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_38291700_38293400
ENSMUSG00000107277.2_0	chr5	-	4754	1	FSM	ENSMUSG00000107277.2	ENSMUST00000202073.2	4786	1	26	6	26	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCATACTTTGGTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	32769123	32764369	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_32764400_32769100
ENSMUSG00000107283.4_19	chr5	-	388	4	FSM	ENSMUSG00000107283.4	ENST00000402722.5	394	4	4	2	4	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	3632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGGACAGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	31303394	31299073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31299195_31302838_31302935_31303027_31303121_31303316
ENSMUSG00000107283.4_20	chr5	-	309	4	FSM	ENSMUSG00000107283.4	ENST00000405076.5	320	4	9	2	9	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTTGGACAGCTTCTTC	NA	NA	NA	NA	NA	NA	NA	NA	31303418	31299073	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31303316
ENSMUSG00000107283.4_21	chr5	-	307	3	ISM	ENSMUSG00000107283.4	ENST00000402722.5	394	4	277	6	277	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAATGCTTGGACAGCTT	NA	NA	NA	NA	NA	NA	NA	NA	31303121	31299077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_31299195_31302838_31302935_31303027
ENSMUSG00000107283.4_8	chr5	-	1644	7	ISM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	513	15	414	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31311082	31298012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011
ENSMUSG00000107283.4_9	chr5	-	1708	8	FSM	ENSMUSG00000107283.4	ENSMUST00000154241.8	1724	8	1	15	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	1257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAACAAGAATTGTG	NA	NA	NA	NA	NA	NA	NA	NA	31311594	31298012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_31299195_31302043_31302097_31302589_31302623_31302838_31302935_31303027_31303121_31303316_31303433_31311011_31311087_31311534
ENSMUSG00000107300.2_0	chr5	+	2472	1	FSM	ENSMUSG00000107300.2	ENSMUST00000202376.2	2512	1	31	9	31	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACTACATTGAAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66846255	66848727	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_66846300_66848700
ENSMUSG00000107331.2_0	chr5	+	1175	1	FSM	ENSMUSG00000107331.2	ENSMUST00000202887.2	1197	1	10	12	10	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAACAATGCAAAACAAA	NA	NA	NA	NA	NA	NA	NA	NA	73468716	73469891	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_73468700_73469900
ENSMUSG00000107336.2_0	chr5	+	974	1	FSM	ENSMUSG00000107336.2	ENSMUST00000202351.2	996	1	11	11	11	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCCTACCCCCATTCAC	NA	NA	NA	NA	NA	NA	NA	NA	147364558	147365532	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_147364600_147365500
ENSMUSG00000107383.2_0	chr7	-	1333	1	FSM	ENSMUSG00000107383.2	ENSMUST00000201488.2	1342	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAACAAGTCTTGCCAG	NA	NA	NA	NA	NA	NA	NA	NA	116425083	116423750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_116423800_116425100
ENSMUSG00000107470.3_0	chr7	+	794	1	FSM	ENSMUSG00000107470.3	ENSMUST00000203929.3	795	1	0	1	0	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAAGGTGGATGCGGTTG	NA	NA	NA	NA	NA	NA	NA	NA	3230841	3231635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_3230800_3231600
ENSMUSG00000107476.4_0	chr6	+	6044	7	FSM	ENSMUSG00000107476.4	ENSMUST00000204484.3	6065	7	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATTGTTGTCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	48481336	48511760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48481485_48485205_48485318_48488748_48489447_48501957_48502057_48504378_48504484_48505284_48507375_48508968
ENSMUSG00000107476.4_1	chr6	+	6058	7	NNC	ENSMUSG00000107476.4	novel	6065	7	NA	NA	0	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTATTGTTGTCTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	48481321	48511760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr6_+_48481485_48485205_48485318_48488748_48489447_48501957_48502056_48504378_48504484_48505284_48507375_48508968
ENSMUSG00000107478.2_0	chr6	-	4352	13	FSM	ENSMUSG00000107478.2	ENSMUST00000129411.7	4359	13	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGTGACTAAACCTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	124732984	124716158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124716377_124717481_124717659_124719874_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124730579_124730663_124732946
ENSMUSG00000107478.2_1	chr6	-	4297	12	ISM	ENSMUSG00000107478.2	ENSMUST00000129411.7	4359	13	2346	0	2346	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAACCTTTGTGTCAGTC	NA	NA	NA	NA	NA	NA	NA	NA	124730638	124716151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_124716377_124717481_124717659_124719874_124720069_124720192_124720374_124720710_124720855_124721682_124722380_124722601_124722825_124722982_124724953_124726198_124726313_124726424_124726563_124726709_124726885_124730579
ENSMUSG00000107482.3_0	chr7	+	889	7	FSM	ENSMUSG00000107482.3	ENSMUST00000203633.3	898	7	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGCCTCTGCTGGAATCC	NA	NA	NA	NA	NA	NA	NA	NA	43093554	43112922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_43093629_43101764_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43112560_43112697_43112783
ENSMUSG00000107482.3_1	chr7	+	811	6	ISM	ENSMUSG00000107482.3	ENSMUST00000203633.3	898	7	8211	12	8211	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCAGAAGCCTCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	43101762	43112916	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_43101924_43102222_43102382_43103941_43104005_43105902_43106062_43112560_43112697_43112783
ENSMUSG00000107524.2_0	chr3	-	1101	1	FSM	ENSMUSG00000107524.2	ENSMUST00000203819.2	1106	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAAGATTCTGGTTTGCT	NA	NA	NA	NA	NA	NA	NA	NA	40819483	40818382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_-_40818400_40819500
ENSMUSG00000107591.2_0	chr6	+	421	1	FSM	ENSMUSG00000107591.2	ENSMUST00000203829.2	457	1	22	14	22	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCAAGAAGAAATAAGTCT	NA	NA	NA	NA	NA	NA	NA	NA	66688696	66689117	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_66688700_66689100
ENSMUSG00000107696.2_0	chr6	+	2078	1	FSM	ENSMUSG00000107696.2	ENSMUST00000203701.2	2109	1	25	6	25	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGCTAATTGTGTCACA	NA	NA	NA	NA	NA	NA	NA	NA	101515738	101517816	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_101515700_101517800
ENSMUSG00000107699.2_0	chr2	+	3588	1	FSM	ENSMUSG00000107699.2	ENSMUST00000204346.2	3605	1	15	2	15	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACATCAGTTTCATT	NA	NA	NA	NA	NA	NA	NA	NA	39614021	39617609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_39614000_39617600
ENSMUSG00000107705.2_0	chr6	+	1983	3	FSM	ENSMUSG00000089862.9	ENSMUST00000162034.8	2015	3	23	9	-23	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCACAAAATGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8259404	8428755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8259494_8270472_8270582_8426970
ENSMUSG00000107705.2_1	chr6	+	2019	4	FSM	ENSMUSG00000089862.9	ENSMUST00000159433.8	2025	4	1	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCACAAAATGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8259430	8428755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8259494_8270472_8270582_8373905_8373968_8426970
ENSMUSG00000107705.2_2	chr6	+	1953	3	FSM	ENSMUSG00000089862.9	ENSMUST00000159168.3	1975	3	10	12	10	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCCACAAAATGGCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	8270475	8428755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_8270582_8373905_8373968_8426970
ENSMUSG00000107743.2_0	chr6	+	1741	1	FSM	ENSMUSG00000107743.2	ENSMUST00000204247.2	1770	1	24	5	24	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTGTATCCATTCATT	NA	NA	NA	NA	NA	NA	NA	NA	146277938	146279679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_146277900_146279700
ENSMUSG00000107768.2_0	chr6	-	2511	4	FSM	ENSMUSG00000107768.2	ENSMUST00000203442.2	2519	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGTTTTTATGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	135296559	135289160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_135291404_135291551_135291660_135292734_135292836_135296500
ENSMUSG00000107768.2_1	chr6	-	2435	3	ISM	ENSMUSG00000107768.2	ENSMUST00000203442.2	2519	4	3741	8	3741	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACAGGTTTTTATGTGGGC	NA	NA	NA	NA	NA	NA	NA	NA	135292818	135289160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_135291404_135291551_135291660_135292734
ENSMUSG00000107789.2_0	chr6	+	4071	2	FSM	ENSMUSG00000007216.7	ENSMUST00000061720.5	4083	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCTCAAAAAAAATGGCT	NA	NA	NA	NA	NA	NA	NA	NA	48590118	48600154	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_48590194_48596158
ENSMUSG00000107868.2_0	chr6	+	2354	1	FSM	ENSMUSG00000107868.2	ENSMUST00000204407.2	2368	1	5	9	5	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCACCACTACCTGGCCC	NA	NA	NA	NA	NA	NA	NA	NA	122788133	122790487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_122788100_122790500
ENSMUSG00000107881.2_0	chr6	-	4220	1	FSM	ENSMUSG00000107881.2	ENSMUST00000203092.2	4229	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATCTTTTGAGGGCTCA	NA	NA	NA	NA	NA	NA	NA	NA	5220482	5216262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_5216300_5220500
ENSMUSG00000107883.2_0	chr2	+	4838	1	FSM	ENSMUSG00000107883.2	ENSMUST00000203312.2	4857	1	13	6	13	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACCCAGAAAATAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38390216	38395054	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38390200_38395100
ENSMUSG00000107884.2_0	chr2	-	1948	1	FSM	ENSMUSG00000107884.2	ENSMUST00000203683.2	1960	1	5	7	5	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTATCAAGAAATTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	38744944	38742996	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_38743000_38744900
ENSMUSG00000107928.2_0	chr6	-	5056	10	FSM	ENSMUSG00000107928.2	ENSMUST00000204419.2	5061	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	87812777	87765847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_87769823_87771595_87771960_87798477_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924_87811977_87812709
ENSMUSG00000107928.2_2	chr6	-	4988	9	ISM	ENSMUSG00000107928.2	ENSMUST00000204419.2	5061	10	801	5	801	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTGCTCAAGCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	87811976	87765847	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr6_-_87769823_87771595_87771960_87798477_87798612_87799321_87799445_87802352_87802471_87804565_87804679_87810623_87810667_87811409_87811476_87811924
ENSMUSG00000107950.2_0	chr6	-	1138	2	FSM	ENSMUSG00000107950.2	ENSMUST00000205201.2	1145	2	5	2	5	-2	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGACTGAGCAGGTGCC	NA	NA	NA	NA	NA	NA	NA	NA	133740020	133738409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_133739354_133739826
ENSMUSG00000107985.2_0	chr7	+	505	4	NNC	ENSMUSG00000107985.2	novel	506	4	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTAGAAAGGCAGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	3499872	3523533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_3499929_3501145_3501205_3522801_3522957_3523298
ENSMUSG00000107985.2_2	chr7	+	435	3	ISM	ENSMUSG00000107985.2	ENSMUST00000203144.2	506	4	1287	3	1287	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTAGAAAGGCAGTCGTC	NA	NA	NA	NA	NA	NA	NA	NA	3501159	3523533	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_3501205_3522801_3522957_3523298
ENSMUSG00000107994.2_0	chr6	+	1796	1	FSM	ENSMUSG00000107994.2	ENSMUST00000203858.2	1813	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCACTAAGCAGTTTAGTT	NA	NA	NA	NA	NA	NA	NA	NA	115652938	115654734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_115652900_115654700
ENSMUSG00000108010.2_0	chr6	-	673	3	FSM	ENSMUSG00000108010.2	ENSMUST00000203855.2	677	3	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGCCTTTAAACAGCA	NA	NA	NA	NA	NA	NA	NA	NA	88167659	88165378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88165412_88166200_88166323_88167141
ENSMUSG00000108026.2_0	chr6	-	2172	1	FSM	ENSMUSG00000108026.2	ENSMUST00000203845.2	2189	1	15	2	15	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCCGGTTTGTTGC	NA	NA	NA	NA	NA	NA	NA	NA	124361104	124358932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_124358900_124361100
ENSMUSG00000108033.2_0	chr6	-	3433	2	FSM	ENSMUSG00000108033.2	ENSMUST00000203836.2	3444	2	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACATTTTCCTGTGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	42327788	42305649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_42308852_42327557
ENSMUSG00000108037.3_0	chr6	+	3508	9	FSM	ENSMUSG00000108037.3	ENSMUST00000203287.3	3516	9	4	4	4	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAAATCTTCATTTTG	NA	NA	NA	NA	NA	NA	NA	NA	125016782	125028501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_125016861_125020916_125020989_125023866_125024034_125024173_125024289_125024444_125024904_125025138_125025201_125025330_125027613_125027809_125027905_125028323
ENSMUSG00000108053.2_0	chr6	-	2790	1	FSM	ENSMUSG00000108053.2	ENSMUST00000203437.2	2799	1	3	6	3	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACACATAAAAGAAAATAC	NA	NA	NA	NA	NA	NA	NA	NA	83293922	83291132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_83291100_83293900
ENSMUSG00000108162.2_0	chr6	-	2501	1	FSM	ENSMUSG00000108162.2	ENSMUST00000204099.2	2530	1	22	7	22	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTGAGTGGTGAGCACG	NA	NA	NA	NA	NA	NA	NA	NA	113332104	113329603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_113329600_113332100
ENSMUSG00000108173.2_0	chr6	+	4059	1	FSM	ENSMUSG00000108173.2	ENSMUST00000204106.2	4075	1	7	9	7	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCATACTCACAAAAGAATA	NA	NA	NA	NA	NA	NA	NA	NA	80632018	80636077	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_80632000_80636100
ENSMUSG00000108199.2_0	chr6	-	1787	1	FSM	ENSMUSG00000108199.2	ENSMUST00000204538.2	1805	1	11	7	11	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACATTATCACTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	92123263	92121476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_92121500_92123300
ENSMUSG00000108207.3_0	chr5	-	1504	4	FSM	ENSMUSG00000108207.3	ENSMUST00000203249.3	1526	4	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTTTAAAAATACACTA	NA	NA	NA	NA	NA	NA	NA	NA	148897006	148890565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_148891483_148891775_148892012_148895957_148896021_148896718
ENSMUSG00000108268.2_0	chr6	-	1889	1	FSM	ENSMUSG00000108268.2	ENSMUST00000204735.2	1929	1	40	0	40	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGGGAAAAAAAAAAAGCAG	NA	NA	NA	NA	NA	NA	NA	NA	88019409	88017520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_88017500_88019400
ENSMUSG00000108279.2_0	chr6	-	476	1	FSM	ENSMUSG00000108279.2	ENSMUST00000203008.2	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACTGAGTCCAGATGGAT	NA	NA	NA	NA	NA	NA	NA	NA	92258374	92257898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_-_92257900_92258400
ENSMUSG00000108286.2_0	chr6	+	1461	1	FSM	ENSMUSG00000108286.2	ENSMUST00000204131.2	1463	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACATACAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	93056090	93057551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_93056100_93057600
ENSMUSG00000108350.2_0	chr7	-	2275	1	FSM	ENSMUSG00000108350.2	ENSMUST00000206403.2	2296	1	21	0	21	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAAAAAAGGTTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	79574594	79572319	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_79572300_79574600
ENSMUSG00000108359.2_0	chr7	-	949	1	FSM	ENSMUSG00000108359.2	ENSMUST00000205973.2	957	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGGTTAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116010038	116009089	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_116009100_116010000
ENSMUSG00000108413.2_0	chr7	+	2475	1	FSM	ENSMUSG00000108413.2	ENSMUST00000206555.2	2503	1	17	11	17	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAGAAGAACCGGTGGTT	NA	NA	NA	NA	NA	NA	NA	NA	25709330	25711805	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_25709300_25711800
ENSMUSG00000108414.2_0	chr19	+	599	10	FSM	ENSMUSG00000108414.2	ENSMUST00000206155.2	605	10	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATTTATTGTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	8700838	8703801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8700871_8701504_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_2	chr19	+	568	9	FSM	ENSMUSG00000108414.2	ENSMUST00000205909.2	709	9	135	6	-7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATTTATTGTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	8701503	8703801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_8701554_8701766_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108414.2_5	chr19	+	515	8	ISM	ENSMUSG00000108414.2	ENSMUST00000205825.2	495	9	259	-92	259	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTATTTATTGTGATGGC	NA	NA	NA	NA	NA	NA	NA	NA	8701769	8703801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_8701848_8702035_8702086_8702377_8702411_8702585_8702621_8702848_8702888_8703145_8703191_8703430_8703467_8703602
ENSMUSG00000108443.2_0	chr7	-	4520	1	FSM	ENSMUSG00000108443.2	ENSMUST00000206288.2	4532	1	6	6	6	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTCTTAAAAAAAAAATTGA	NA	NA	NA	NA	NA	NA	NA	NA	55667221	55662701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_55662700_55667200
ENSMUSG00000108449.2_0	chr7	-	339	5	FSM	ENSMUSG00000108449.2	ENSMUST00000206249.2	343	5	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGTGACTTTTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	98064831	98037301	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_98037377_98042206_98042299_98061078_98061121_98062029_98062071_98064742
ENSMUSG00000108456.2_0	chr7	+	2495	1	FSM	ENSMUSG00000108456.2	ENSMUST00000206533.2	2500	1	4	1	4	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCCTGTTGATCTTCTTT	NA	NA	NA	NA	NA	NA	NA	NA	116146103	116148598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_116146100_116148600
ENSMUSG00000108461.2_0	chr7	+	724	1	FSM	ENSMUSG00000108461.2	ENSMUST00000206201.2	750	1	19	7	19	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGAGGCTGGATGAA	NA	NA	NA	NA	NA	NA	NA	NA	116042828	116043552	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_116042800_116043600
ENSMUSG00000108483.2_0	chr7	+	941	3	FSM	ENSMUSG00000108483.2	ENSMUST00000206354.2	955	3	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATACATAAATATATATAT	NA	NA	NA	NA	NA	NA	NA	NA	127033593	127038550	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127033816_127036127_127036184_127037887
ENSMUSG00000108526.2_0	chr6	+	1805	1	FSM	ENSMUSG00000108526.2	ENSMUST00000206938.2	1836	1	4	27	4	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91686390	91688195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_91686400_91688200
ENSMUSG00000108542.2_0	chr7	+	1371	1	FSM	ENSMUSG00000108542.2	ENSMUST00000206671.2	1396	1	15	10	15	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAACTGAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	75131761	75133132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_75131800_75133100
ENSMUSG00000108573.2_0	chr7	+	2808	1	FSM	ENSMUSG00000108573.2	ENSMUST00000206292.2	2829	1	10	11	10	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAGACAGGAATAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	121695315	121698123	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_121695300_121698100
ENSMUSG00000108591.2_0	chr6	+	1544	1	FSM	ENSMUSG00000108591.2	ENSMUST00000205370.2	1560	1	8	8	8	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGACAAAGAGTGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	72416041	72417585	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_72416000_72417600
ENSMUSG00000108621.2_0	chr7	+	16017	6	FSM	ENSMUSG00000108621.2	ENSMUST00000188038.3	16021	6	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTGTTTGTATCTGCTT	NA	NA	NA	NA	NA	NA	NA	NA	39201928	39230013	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_39202036_39202651_39202757_39213125_39213253_39213425_39213487_39214290_39214506_39214611
ENSMUSG00000108670.2_0	chr7	-	1624	1	FSM	ENSMUSG00000108670.2	ENSMUST00000206812.2	1633	1	6	3	6	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGCCCTTTGTGGTTCG	NA	NA	NA	NA	NA	NA	NA	NA	78573628	78572004	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_78572000_78573600
ENSMUSG00000108732.2_0	chr7	+	3869	1	FSM	ENSMUSG00000108732.2	ENSMUST00000205403.2	3881	1	4	8	4	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGACTACCTAAAATGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	34089160	34093029	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_34089200_34093000
ENSMUSG00000108738.2_0	chr7	+	4047	1	FSM	ENSMUSG00000108738.2	ENSMUST00000205941.2	4052	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCAAAAGAAAAAAAATATTC	NA	NA	NA	NA	NA	NA	NA	NA	115933501	115937548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_115933500_115937500
ENSMUSG00000108798.2_0	chr7	+	1483	1	FSM	ENSMUSG00000108798.2	ENSMUST00000206656.2	1516	1	27	6	27	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAATATTATCCCTAAT	NA	NA	NA	NA	NA	NA	NA	NA	17963728	17965211	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_17963700_17965200
ENSMUSG00000108801.2_0	chr7	+	955	3	FSM	ENSMUSG00000108801.2	ENSMUST00000205284.2	972	3	7	10	7	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCATGATCAAGAGAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	127296209	127299955	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127296369_127298101_127298271_127299328
ENSMUSG00000108815.2_0	chr7	+	5163	19	FSM	ENSMUSG00000108815.2	ENSMUST00000154987.8	5188	19	21	4	21	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	127384800	127402970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_127384909_127385052_127385845_127386297_127386475_127386670_127386759_127387368_127387527_127387653_127387742_127390386_127390705_127394814_127395871_127396245_127396419_127396498_127396610_127396775_127396896_127398262_127398401_127398477_127398653_127400298_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000108815.2_4	chr7	+	1717	6	ISM	ENSMUSG00000042289.12	ENSMUST00000046863.12	1828	7	467	4	155	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTTGTCTACCTTTTA	NA	NA	NA	NA	NA	NA	NA	NA	127400242	127402970	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_127400419_127400632_127400789_127401005_127401115_127401185_127401286_127401407_127401571_127401957
ENSMUSG00000108929.3_0	chr19	+	1340	8	FSM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGTGATGCTCAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	40790801	40816101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_40790895_40795259_40795359_40797718_40797917_40799025_40799116_40801659_40801774_40804213_40804349_40804656_40804780_40815613
ENSMUSG00000108929.3_1	chr19	+	1249	7	ISM	ENSMUSG00000108929.3	ENST00000344386.3	1348	8	4464	0	4464	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCGTGATGCTCAACTTG	NA	NA	NA	NA	NA	NA	NA	NA	40795257	40816101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_40795359_40797718_40797917_40799025_40799116_40801659_40801774_40804213_40804349_40804656_40804780_40815613
ENSMUSG00000108942.2_0	chr7	+	2438	1	FSM	ENSMUSG00000108942.2	ENSMUST00000207134.2	2465	1	17	10	17	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAAAAACAGTATTGTAT	NA	NA	NA	NA	NA	NA	NA	NA	19631275	19633713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_19631300_19633700
ENSMUSG00000108949.2_0	chr7	-	315	3	FSM	ENSMUSG00000108949.2	ENSMUST00000208604.2	317	3	0	2	0	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGCTATCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	6286609	6285839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_6285957_6286285_6286420_6286545
ENSMUSG00000108949.2_1	chr7	-	219	2	ISM	ENSMUSG00000108949.2	ENSMUST00000208604.2	317	3	222	2	222	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGCTATCCTCTT	NA	NA	NA	NA	NA	NA	NA	NA	6286387	6285839	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_6285957_6286285
ENSMUSG00000109051.2_0	chr7	+	2987	1	FSM	ENSMUSG00000109051.2	ENSMUST00000208060.2	2990	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACTAAAAAGAGGAAATAGT	NA	NA	NA	NA	NA	NA	NA	NA	48995841	48998828	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_48995800_48998800
ENSMUSG00000109061.2_0	chr8	+	3488	11	FSM	ENSMUSG00000002948.20	ENSMUST00000110998.9	3497	11	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4288748	4297896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4289034_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ENSMUSG00000109061.2_2	chr8	+	3516	12	FSM	ENSMUSG00000002948.20	ENSMUST00000062686.11	3525	12	8	1	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGGTGTCCTAAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	4288768	4297896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694
ENSMUSG00000109061.2_3	chr8	+	2858	16	FSM	ENSMUSG00000109061.2	ENSMUST00000145165.8	2879	16	19	2	19	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGGTGGAGTCAATA	NA	NA	NA	NA	NA	NA	NA	NA	4288883	4301421	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_4289034_4290687_4290736_4293303_4293446_4293552_4293620_4293742_4293857_4293950_4294071_4294228_4294337_4294426_4294607_4294694_4294776_4294860_4295004_4295542_4295589_4295694_4295826_4299204_4299342_4299425_4299747_4300266_4300382_4300466
ENSMUSG00000109112.2_0	chr11	-	1730	2	FSM	ENSMUSG00000109112.2	ENST00000587304.3	1745	2	15	0	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACCTTAGCTAACCGAG	NA	NA	NA	NA	NA	NA	NA	NA	100533938	100530758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_100531996_100533445
ENSMUSG00000109118.2_0	chr7	+	626	2	FSM	ENSMUSG00000109118.2	ENSMUST00000208993.2	649	2	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAACTAGGTATACCTGAG	NA	NA	NA	NA	NA	NA	NA	NA	46657848	46658751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_46658195_46658471
ENSMUSG00000109129.2_0	chr7	+	1132	2	FSM	ENSMUSG00000051184.8	ENSMUST00000086349.5	1142	2	5	5	5	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGACTTCCACTGTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	5018473	5021481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_5018560_5020435
ENSMUSG00000109162.2_0	chr8	-	4432	1	FSM	ENSMUSG00000109162.2	ENSMUST00000207411.2	4448	1	10	6	10	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCCCCAAACAAAAGAAATA	NA	NA	NA	NA	NA	NA	NA	NA	9740266	9735834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_9735800_9740300
ENSMUSG00000109179.3_0	chr15	+	6561	24	FSM	ENSMUSG00000109179.3	ENSMUST00000208833.3	6581	24	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATTTTTTTAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	76238643	76249393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76238874_76239054_76239192_76239332_76239962_76240077_76240200_76240331_76241032_76241123_76241267_76241356_76241594_76241668_76241760_76241897_76242031_76242107_76242230_76242455_76242517_76242680_76242831_76242909_76243171_76243257_76243381_76243456_76243541_76244499_76244629_76244711_76244928_76245006_76245187_76245312_76245511_76245610_76245733_76245816_76245974_76246865_76247477_76247561_76247624_76247730
ENSMUSG00000109198.2_0	chr7	-	3770	1	FSM	ENSMUSG00000109198.2	ENSMUST00000208484.2	3795	1	12	13	12	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAATAATTTAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	44547511	44543741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44543700_44547500
ENSMUSG00000109249.2_0	chr7	-	3792	1	FSM	ENSMUSG00000109249.2	ENSMUST00000209012.2	3827	1	32	3	32	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATAGCAAACACGAATCA	NA	NA	NA	NA	NA	NA	NA	NA	66268864	66265072	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_66265100_66268900
ENSMUSG00000109298.2_0	chr7	+	1286	2	FSM	ENSMUSG00000109298.2	ENSMUST00000209009.2	1304	2	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTCAGAGCCTGCCAAAT	NA	NA	NA	NA	NA	NA	NA	NA	68089132	68091464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_68090232_68091277
ENSMUSG00000109324.3_10	chr7	-	1104	8	FSM	ENSMUSG00000109324.3	ENST00000610806.4	1123	8	14	5	1	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGACCATGCCACTTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44635857	44626192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_5	chr7	-	2127	10	FSM	ENSMUSG00000109324.3	ENSMUST00000207370.2	2147	10	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCACCTGGCTGTTTGC	NA	NA	NA	NA	NA	NA	NA	NA	44635902	44625418	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44635706
ENSMUSG00000109324.3_8	chr7	-	1494	11	FSM	ENSMUSG00000109324.3	ENSMUST00000107843.11	1508	11	8	6	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCCACTTCTCGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	44635984	44626187	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44626408_44626927_44627050_44627550_44627702_44628098_44628215_44628306_44628395_44628806_44628950_44631010_44631075_44631161_44631318_44632909_44633012_44633503_44633558_44635706
ENSMUSG00000109336.2_0	chr7	-	4364	13	FSM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	0	27	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	28135616	28098973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135562
ENSMUSG00000109336.2_1	chr7	-	4301	12	ISM	ENSMUSG00000109336.2	ENSMUST00000208199.2	4391	13	12363	27	12363	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	28123253	28098973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_28101043_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860
ENSMUSG00000109336.2_5	chr7	-	2781	13	FSM	ENSMUSG00000109336.2	ENST00000598913.5	2799	13	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGTTTTTCTCTGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	28135716	28100415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_28100838_28101248_28101333_28103044_28103169_28103288_28103488_28104913_28105033_28105378_28105465_28105793_28106113_28106655_28106743_28106893_28107004_28107360_28107601_28113296_28113768_28122860_28123263_28135598
ENSMUSG00000109378.2_0	chr7	+	3002	10	FSM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGTATCTGCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262768	30267378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_30262825_30262956_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ENSMUSG00000109378.2_2	chr7	+	2944	9	ISM	ENSMUSG00000109378.2	ENSMUST00000167042.8	3007	10	190	5	190	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCAGTATCTGCCTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	30262958	30267378	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_30263045_30263354_30263422_30263506_30263557_30263627_30263727_30263898_30264033_30264127_30264224_30264519_30265807_30266173_30266926_30267005
ENSMUSG00000109390.2_0	chr7	-	3784	1	FSM	ENSMUSG00000109390.2	ENSMUST00000207577.2	3794	1	5	5	5	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTTAAAAAAAAAGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	80563909	80560125	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_80560100_80563900
ENSMUSG00000109456.2_0	chr7	+	2853	1	FSM	ENSMUSG00000109456.2	ENSMUST00000208395.2	2880	1	17	10	17	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAGCAAGCCAAAATTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	6812016	6814869	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_6812000_6814900
ENSMUSG00000109509.2_0	chr7	-	494	1	FSM	ENSMUSG00000109509.2	ENSMUST00000208689.2	397	1	-70	-27	-70	27	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAATTAACT	NA	NA	NA	NA	NA	NA	NA	NA	30184592	30184098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_30184100_30184600
ENSMUSG00000109511.2_0	chr7	+	2697	2	FSM	ENSMUSG00000109511.2	ENSMUST00000208626.2	2708	2	6	5	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44465517	44480228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44465897_44477910
ENSMUSG00000109511.2_1	chr7	+	2703	2	FSM	ENSMUSG00000109511.2	ENSMUST00000057195.17	2722	2	11	8	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	895	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAGACTTGCTGTGAGT	NA	NA	NA	NA	NA	NA	NA	NA	44465522	44480228	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44465908_44477910
ENSMUSG00000109561.2_1	chr13	+	4877	17	FSM	ENSMUSG00000109561.2	ENST00000506364.6	4897	17	12	8	12	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	605	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACGGTGAGTTCTTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	96932256	97029601	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_96932808_96935118_96935400_96935865_96935973_96940615_96940772_96957821_96957965_96962605_96962751_96967062_96967116_96967957_96969369_96970103_96970275_96988163_96988302_96989108_96989252_97002838_97003002_97005879_97005996_97009144_97009233_97010446_97010544_97014652_97015632_97029466
ENSMUSG00000109602.2_0	chr7	+	510	3	FSM	ENSMUSG00000109602.2	ENSMUST00000211176.2	515	3	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTACTGGTGTGTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	45391472	45399676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_45391556_45394417_45394490_45399321
ENSMUSG00000109602.2_1	chr7	+	414	2	ISM	ENSMUSG00000109602.2	ENSMUST00000211176.2	515	3	2944	19	2944	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGGCATATGGCACCACT	NA	NA	NA	NA	NA	NA	NA	NA	45394416	45399662	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_+_45394490_45399321
ENSMUSG00000109610.2_0	chr8	-	853	1	FSM	ENSMUSG00000109610.2	ENSMUST00000210343.2	879	1	20	6	20	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	61834401	61833548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_61833500_61834400
ENSMUSG00000109701.2_0	chr8	+	358	4	FSM	ENSMUSG00000109701.2	ENSMUST00000209324.2	373	4	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAATTCTCAAGACTGGT	NA	NA	NA	NA	NA	NA	NA	NA	103998022	104066747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_103998061_103998573_103998676_104066142_104066227_104066613
ENSMUSG00000109701.2_1	chr8	+	319	3	ISM	ENSMUSG00000109701.2	ENSMUST00000209324.2	373	4	563	4	563	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTGGTGGGAGCCACAT	NA	NA	NA	NA	NA	NA	NA	NA	103998585	104066758	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_103998676_104066142_104066227_104066613
ENSMUSG00000109704.2_0	chr8	+	1378	3	FSM	ENSMUSG00000109704.2	ENSMUST00000211253.2	1405	3	22	5	22	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGAGTTGCCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	36626654	36628737	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_36626734_36626900_36627001_36627538
ENSMUSG00000109704.2_1	chr8	+	1295	2	ISM	ENSMUSG00000109704.2	ENSMUST00000211253.2	1405	3	267	10	267	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATAAGAGTTGCCTTG	NA	NA	NA	NA	NA	NA	NA	NA	36626899	36628732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_36627001_36627538
ENSMUSG00000109764.2_0	chr8	-	1680	12	FSM	ENSMUSG00000109764.2	ENST00000513864.2	1701	12	14	7	14	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTGGAGACATCTTC	NA	NA	NA	NA	NA	NA	NA	NA	45742207	45722965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_45723131_45725352_45725449_45726512_45726689_45728444_45728614_45729078_45729192_45729286_45729450_45730011_45730122_45731004_45731165_45735763_45735874_45736247_45736408_45739962_45740070_45742056
ENSMUSG00000109781.2_2	chr7	-	1168	1	FSM	ENSMUSG00000109781.2	ENSMUST00000209624.2	1229	1	39	22	39	-22	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAATGTTTAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	16141869	16140701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_16140700_16141900
ENSMUSG00000109783.2_0	chr16	+	1149	5	FSM	ENSMUSG00000109783.2	ENSMUST00000211460.2	1155	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTTGGGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23338959	23378824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23339225_23346244_23346357_23353329_23353550_23362372_23362622_23378521
ENSMUSG00000109783.2_1	chr16	+	1077	4	FSM	ENSMUSG00000109783.2	ENSMUST00000210658.2	1105	4	17	11	17	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAGCTCCACGAATGAAC	NA	NA	NA	NA	NA	NA	NA	NA	23339027	23353830	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23339225_23340436_23340704_23346244_23346357_23353329
ENSMUSG00000109783.2_2	chr16	+	990	5	FSM	ENSMUSG00000109783.2	ENSMUST00000210371.2	1009	5	13	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTTGTTTGGGTGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	23339105	23378824	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23339225_23346244_23346357_23353329_23353550_23373447_23373684_23378521
ENSMUSG00000109783.2_3	chr16	+	1392	5	FSM	ENSMUSG00000109783.2	ENSMUST00000211499.2	1405	5	11	2	11	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAATATGTTTCACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	23339104	23362780	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_23339225_23340436_23340969_23346244_23346357_23353329_23353550_23362372
ENSMUSG00000109803.2_0	chr10	+	547	2	FSM	ENSMUSG00000109803.2	ENSMUST00000209665.2	550	2	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGAGAAGTATCTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	125144780	125146545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_125144918_125146135
ENSMUSG00000109807.2_0	chr8	-	2175	1	FSM	ENSMUSG00000109807.2	ENSMUST00000211328.2	2200	1	25	0	25	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCGGCCCCAGAGCCTC	NA	NA	NA	NA	NA	NA	NA	NA	46926602	46924427	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_46924400_46926600
ENSMUSG00000109812.2_0	chr8	+	1881	1	FSM	ENSMUSG00000109812.2	ENSMUST00000210665.2	1896	1	2	13	2	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACATAAATCAACAAAA	NA	NA	NA	NA	NA	NA	NA	NA	91603210	91605091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_91603200_91605100
ENSMUSG00000109857.2_0	chr16	+	527	3	FSM	ENSMUSG00000109857.2	ENSMUST00000210738.2	527	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTAATTCCCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	13280409	13285101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13280461_13281736_13281802_13284690
ENSMUSG00000109857.2_1	chr16	+	479	2	ISM	ENSMUSG00000109857.2	ENSMUST00000210738.2	527	3	1324	0	-314	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACTAATTCCCTTCGTG	NA	NA	NA	NA	NA	NA	NA	NA	13281733	13285101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_13281802_13284690
ENSMUSG00000109865.2_0	chr2	-	1778	14	FSM	ENSMUSG00000109865.2	ENSMUST00000027961.12	1795	14	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTACTGGAGTCTTTG	NA	NA	NA	NA	NA	NA	NA	NA	3513841	3489893	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_3490107_3490734_3490806_3491973_3492148_3492557_3492771_3495534_3495638_3497600_3497757_3499058_3499221_3500243_3500349_3502084_3502176_3503530_3503637_3503773_3503823_3512051_3512135_3512210_3512292_3513670
ENSMUSG00000109881.2_0	chr7	+	513	3	FSM	ENSMUSG00000109881.2	ENSMUST00000210611.2	519	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATACTTTCAACTTCTCT	NA	NA	NA	NA	NA	NA	NA	NA	138492692	138496398	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_138493035_138496145_138496242_138496323
ENSMUSG00000109887.2_0	chr1	-	2445	4	FSM	ENSMUSG00000109887.2	ENSMUST00000209405.2	2461	4	2	14	2	-14	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATACCCAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	18129278	18064699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_18065906_18069583_18069885_18105033_18105118_18128424
ENSMUSG00000109901.3_0	chr18	+	2507	1	FSM	ENSMUSG00000109901.3	ENSMUST00000210564.3	2524	1	8	9	8	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	420	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCATGGGTTATTTC	NA	NA	NA	NA	NA	NA	NA	NA	67338444	67340951	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67338400_67341000
ENSMUSG00000109903.2_0	chr5	+	2980	21	FSM	ENSMUSG00000109903.2	ENSMUST00000211738.2	2987	21	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGACCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	16996807	17087043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_16996860_16997803_16997972_17006486_17006658_17010227_17010323_17011693_17011817_17013228_17013333_17014951_17015098_17016998_17017182_17020634_17020727_17027194_17027308_17028035_17028182_17029640_17029822_17031902_17032060_17040917_17041024_17041567_17041790_17042501_17042648_17061258_17061401_17061584_17061839_17075214_17075346_17076623_17076723_17086894
ENSMUSG00000109903.2_2	chr5	+	2922	20	ISM	ENSMUSG00000109903.2	ENSMUST00000211738.2	2987	21	1002	7	1002	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAGACCATCAAG	NA	NA	NA	NA	NA	NA	NA	NA	16997809	17087043	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr5_+_16997972_17006486_17006658_17010227_17010323_17011693_17011817_17013228_17013333_17014951_17015098_17016998_17017182_17020634_17020727_17027194_17027308_17028035_17028182_17029640_17029822_17031902_17032060_17040917_17041024_17041567_17041790_17042501_17042648_17061258_17061401_17061584_17061839_17075214_17075346_17076623_17076723_17086894
ENSMUSG00000109904.2_0	chr7	+	1726	1	FSM	ENSMUSG00000109904.2	ENSMUST00000210940.2	1751	1	21	4	21	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGGGAGGCCGACCCAA	NA	NA	NA	NA	NA	NA	NA	NA	109719217	109720943	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_109719200_109720900
ENSMUSG00000109909.2_0	chr8	+	1605	1	FSM	ENSMUSG00000109909.2	ENSMUST00000210429.2	1632	1	27	0	27	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTCTTGGTCCTGA	NA	NA	NA	NA	NA	NA	NA	NA	104879364	104880969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_104879400_104881000
ENSMUSG00000109916.2_0	chr7	+	919	2	FSM	ENSMUSG00000109916.2	ENSMUST00000211459.2	928	2	3	6	3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTATGTATGGTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	11212137	11213488	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_11212268_11212699
ENSMUSG00000109936.2_0	chr7	+	1052	1	FSM	ENSMUSG00000109936.2	ENSMUST00000209535.2	1057	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCCAAAATTCTTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	141836946	141837998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_141836900_141838000
ENSMUSG00000109941.2_0	chr8	+	1310	1	FSM	ENSMUSG00000109941.2	ENSMUST00000210390.2	1326	1	9	7	9	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	156	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTGTGTGTTGAGTC	NA	NA	NA	NA	NA	NA	NA	NA	111782979	111784289	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_111783000_111784300
ENSMUSG00000109946.2_0	chr2	+	1873	1	FSM	ENSMUSG00000109946.2	ENSMUST00000209765.2	1898	1	17	8	17	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAACTCTTCCCTTTCTCA	NA	NA	NA	NA	NA	NA	NA	NA	27332352	27334225	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_27332400_27334200
ENSMUSG00000109956.2_0	chr8	-	1764	1	FSM	ENSMUSG00000109956.2	ENSMUST00000209619.2	1789	1	12	13	12	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCCCACTTAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	92034371	92032607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_92032600_92034400
ENSMUSG00000110010.2_0	chr7	-	2522	1	FSM	ENSMUSG00000110010.2	ENSMUST00000209629.2	2546	1	22	2	22	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACTGTCTACTCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	46334785	46332263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46332300_46334800
ENSMUSG00000110018.3_0	chr15	+	1229	9	FSM	ENSMUSG00000110018.3	ENSMUST00000211750.2	1234	9	4	1	4	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTCTCTATGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5525750	5624464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_5525837_5526021_5526202_5569105_5569207_5610109_5610304_5610653_5610750_5611779_5611902_5616455_5616519_5617166_5617253_5624163
ENSMUSG00000110120.2_0	chr8	-	1439	1	FSM	ENSMUSG00000110120.2	ENSMUST00000209486.2	1465	1	9	17	9	-17	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAACCAAAAAAATAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	26622661	26621222	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_26621200_26622700
ENSMUSG00000110148.2_0	chr8	+	1113	2	FSM	ENSMUSG00000110148.2	ENSMUST00000210072.2	1115	2	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCGACGGCCATCTCT	NA	NA	NA	NA	NA	NA	NA	NA	25591232	25599383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_25592232_25599269
ENSMUSG00000110156.3_0	chr19	+	1835	1	FSM	ENSMUSG00000110156.3	ENSMUST00000235359.2	1843	1	0	8	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCTAAGCTCACACTA	NA	NA	NA	NA	NA	NA	NA	NA	5963014	5964849	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5963000_5964800
ENSMUSG00000110161.2_0	chr9	+	545	3	FSM	ENSMUSG00000110161.2	ENSMUST00000211167.2	545	3	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAAAGTGGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	8004830	8009270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_8004885_8005927_8006106_8008957
ENSMUSG00000110161.2_1	chr9	+	491	2	ISM	ENSMUSG00000110161.2	ENSMUST00000211167.2	545	3	1097	0	1097	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAAAGTGGCTTCATG	NA	NA	NA	NA	NA	NA	NA	NA	8005927	8009270	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_8006106_8008957
ENSMUSG00000110185.3_0	chr18	+	2822	1	FSM	ENSMUSG00000110185.3	ENSMUST00000210490.3	2839	1	7	10	7	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTACATAAACAGATCATCA	NA	NA	NA	NA	NA	NA	NA	NA	36431738	36434560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36431700_36434600
ENSMUSG00000110195.2_0	chr7	+	2830	27	FSM	ENSMUSG00000110195.2	ENST00000418754.6	2843	27	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTGCAGAAGGCAAGCAAG	NA	NA	NA	NA	NA	NA	NA	NA	101070926	101161032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101071203_101100608_101100676_101149594_101149655_101150183_101150326_101150816_101150870_101151060_101151136_101151220_101151263_101151740_101151810_101152018_101152150_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ENSMUSG00000110195.2_4	chr7	+	3246	21	FSM	ENSMUSG00000110195.2	ENST00000376450.7	3260	21	11	3	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACCCTCCCACAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	101100512	101162021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101100676_101130577_101130668_101133748_101133838_101152505_101152618_101153030_101153071_101153178_101153243_101153584_101153658_101153777_101153956_101154163_101154277_101155125_101155204_101156302_101156426_101156883_101156955_101157213_101157337_101157648_101157737_101157898_101157947_101158923_101158999_101159141_101159242_101159512_101159626_101160135_101160175_101160320_101160428_101160662
ENSMUSG00000110202.2_0	chr8	-	439	2	FSM	ENSMUSG00000110202.2	ENSMUST00000211147.2	475	2	35	1	35	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTATCAAGCATTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	80479007	80473896	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_80473931_80478602
ENSMUSG00000110202.2_1	chr8	-	440	1	ISM	ENSMUSG00000110202.2	ENSMUST00000211147.2	475	2	0	4707	0	-4707	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	80479042	80478602	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_80478600_80479000
ENSMUSG00000110206.2_0	chr7	-	1333	8	FSM	ENSMUSG00000110206.2	ENSMUST00000211429.2	1358	8	24	1	24	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44785685	44780612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44780991_44781492_44781562_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441
ENSMUSG00000110206.2_1	chr7	-	1075	9	FSM	ENSMUSG00000110206.2	ENSMUST00000146760.7	1075	9	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44785856	44780612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_44780856_44781492_44781562_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441_44785509_44785802
ENSMUSG00000110206.2_2	chr7	-	1010	8	ISM	ENSMUSG00000110206.2	ENSMUST00000146760.7	1075	9	359	0	-17	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGCTGCGTGCCTGGAA	NA	NA	NA	NA	NA	NA	NA	NA	44785497	44780612	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr7_-_44780856_44781492_44781562_44781651_44781837_44783305_44783451_44783796_44783941_44784545_44784600_44785087_44785202_44785441
ENSMUSG00000110239.2_0	chr7	-	441	2	FSM	ENSMUSG00000110239.2	ENSMUST00000209980.2	468	2	5	22	5	-22	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTAATTAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100997186	100996637	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_100996946_100997053
ENSMUSG00000110277.3_0	chr18	+	1986	4	FSM	ENSMUSG00000110277.3	ENSMUST00000211710.2	2003	4	17	0	-2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAAGTGTTGTCTTGGTC	NA	NA	NA	NA	NA	NA	NA	NA	90597917	90610646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_90598024_90607079_90607207_90607397_90607459_90608954
ENSMUSG00000110277.3_1	chr18	+	1922	3	FSM	ENSMUSG00000110277.3	ENSMUST00000209969.3	1929	3	3	4	3	2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGTTGTCTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	90597922	90610648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_90598024_90607079_90607207_90608954
ENSMUSG00000110279.2_0	chr7	+	768	3	FSM	ENSMUSG00000110279.2	ENSMUST00000209340.2	778	3	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGACCCCATTACTGCGTA	NA	NA	NA	NA	NA	NA	NA	NA	44771346	44773564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_44771547_44772486_44772645_44773154
ENSMUSG00000110289.2_0	chr8	-	1448	1	FSM	ENSMUSG00000110289.2	ENSMUST00000211700.2	1471	1	23	0	23	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAGTGAGCATAACTTA	NA	NA	NA	NA	NA	NA	NA	NA	58105370	58103922	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_58103900_58105400
ENSMUSG00000110316.2_0	chr7	-	1297	1	FSM	ENSMUSG00000110316.2	ENSMUST00000211086.2	1330	1	21	12	21	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAAGTGTAATTTTAAAT	NA	NA	NA	NA	NA	NA	NA	NA	46162183	46160886	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_46160900_46162200
ENSMUSG00000110340.2_0	chr8	-	435	2	ISM	ENSMUSG00000110340.2	ENSMUST00000209501.2	489	3	208	7	208	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGGAGTTTAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	104073958	104070516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_-_104070793_104073799
ENSMUSG00000110340.2_1	chr8	-	482	3	FSM	ENSMUSG00000110340.2	ENSMUST00000209501.2	489	3	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTGGAGTTTAACTCAGA	NA	NA	NA	NA	NA	NA	NA	NA	104074166	104070516	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_104070793_104073799_104073970_104074130
ENSMUSG00000110340.2_2	chr8	-	465	3	NNC	ENSMUSG00000110340.2	novel	489	3	NA	NA	10	-5	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGAGTTTAACTCAGATG	NA	NA	NA	NA	NA	NA	NA	NA	104074156	104070514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_104070793_104073799_104073970_104074139
ENSMUSG00000110344.2_0	chr11	+	2014	4	FSM	ENSMUSG00000110344.2	ENSMUST00000134929.8	2031	4	11	6	11	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGATTGAGCAATCTTTT	NA	NA	NA	NA	NA	NA	NA	NA	90078520	90142075	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_90079062_90099809_90099873_90139630_90140562_90141596
ENSMUSG00000110365.2_0	chr7	-	2674	3	FSM	ENSMUSG00000110365.2	ENSMUST00000209940.2	2720	3	38	8	38	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGCTAAGTGTGTCC	NA	NA	NA	NA	NA	NA	NA	NA	12931104	12926051	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_12928365_12930508_12930628_12930862
ENSMUSG00000110368.2_1	chr8	-	2549	2	FSM	ENSMUSG00000110368.2	ENSMUST00000210776.2	2583	2	27	7	27	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATCAAACAGTTAATAT	NA	NA	NA	NA	NA	NA	NA	NA	65164083	65154147	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_65156606_65163992
ENSMUSG00000110382.2_0	chr8	+	5646	4	FSM	ENSMUSG00000110382.2	ENSMUST00000209933.2	5652	4	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATATTTATGTGGGGA	NA	NA	NA	NA	NA	NA	NA	NA	78770640	78782098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_78775586_78777202_78777314_78777428_78777605_78781684
ENSMUSG00000110386.2_0	chr8	-	1867	2	FSM	ENSMUSG00000110386.2	ENSMUST00000209823.2	1885	2	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	2274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTACCCACCTCGGGGGTCT	NA	NA	NA	NA	NA	NA	NA	NA	85858907	85852507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_85853704_85858236
ENSMUSG00000110388.2_0	chr8	+	3050	3	FSM	ENSMUSG00000110388.2	ENSMUST00000211572.2	3077	3	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACTGAGAGGTTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79952585	79959853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_79952699_79956521_79956864_79957258
ENSMUSG00000110419.2_0	chr8	+	390	2	FSM	ENSMUSG00000110419.2	ENST00000499322.7	412	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	624	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTATTGCCTTCTCTCTTGG	NA	NA	NA	NA	NA	NA	NA	NA	58105672	58106856	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_58105985_58106778
ENSMUSG00000110427.2_0	chr8	+	4322	5	FSM	ENSMUSG00000110427.2	ENSMUST00000212602.2	4333	5	5	6	5	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAGAGGAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	96223062	96230340	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_96223588_96224143_96224370_96225378_96225485_96225841_96225909_96226942
ENSMUSG00000110444.3_0	chr8	-	7738	5	FSM	ENSMUSG00000110444.3	ENSMUST00000213012.2	7778	5	26	14	26	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAATGCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69848148	69819175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69829137_69829248_69848092
ENSMUSG00000110444.3_1	chr8	-	7769	4	FSM	ENSMUSG00000110444.3	ENSMUST00000239456.2	7793	4	10	14	-7	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATACAAAATGCAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69848181	69819175	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69847984
ENSMUSG00000110444.3_2	chr8	-	7634	4	FSM	ENSMUSG00000110444.3	ENSMUST00000072427.7	7668	4	19	15	19	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATACAAAATGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	69848155	69819176	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_69826560_69827709_69827771_69827957_69828085_69848092
ENSMUSG00000110469.2_0	chr8	-	1246	1	FSM	ENSMUSG00000110469.2	ENSMUST00000212864.2	1250	1	2	2	2	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACCCAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	76133215	76131969	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_76132000_76133200
ENSMUSG00000110499.2_0	chr8	+	1900	1	FSM	ENSMUSG00000110499.2	ENSMUST00000211865.2	1915	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAATTACTTAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	94775415	94777315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_94775400_94777300
ENSMUSG00000110537.2_0	chr8	+	2606	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212411.2	2617	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCATTAAAGGATTTGT	NA	NA	NA	NA	NA	NA	NA	NA	123892004	123899888	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123892257_123897534
ENSMUSG00000110537.2_4	chr8	+	1103	2	FSM	ENSMUSG00000110537.2	ENSMUST00000212490.2	1115	2	6	6	6	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGGACAACATGGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	123899589	123905498	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_123899783_123904588
ENSMUSG00000110588.2_0	chr8	-	445	3	Genic_Genomic	ENSMUSG00000110588.2	novel	2665	1	NA	NA	-156	-1982	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTCCGCCCGGGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	94900196	94899357	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr8_-_94899503_94899753_94899819_94899961
ENSMUSG00000110605.2_0	chr8	+	1119	4	FSM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	3	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCTTATAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	129990124	130009313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129990206_130007503_130007631_130007817_130007879_130008463
ENSMUSG00000110605.2_1	chr8	+	3750	3	FSM	ENSMUSG00000110605.2	ENSMUST00000212145.2	3767	3	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAGACAGTCTCTCGTGA	NA	NA	NA	NA	NA	NA	NA	NA	129990140	129998344	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_129990206_129993965_129994181_129994874
ENSMUSG00000110605.2_3	chr8	+	1039	3	ISM	ENSMUSG00000110605.2	ENSMUST00000212180.2	1134	4	17381	12	17374	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAACCTTATAAATGTG	NA	NA	NA	NA	NA	NA	NA	NA	130007502	130009313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr8_+_130007631_130007817_130007879_130008463
ENSMUSG00000110611.2_0	chr8	+	983	2	FSM	ENSMUSG00000110611.2	ENSMUST00000212288.2	989	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTATGTCTGTCCTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	106016626	106017950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_106017195_106017535
ENSMUSG00000110615.2_0	chr8	+	1048	3	FSM	ENSMUSG00000110615.2	ENSMUST00000212188.2	1052	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCTCTACGTAGTCACC	NA	NA	NA	NA	NA	NA	NA	NA	124676158	124685670	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_124676327_124679296_124679379_124684872
ENSMUSG00000110623.2_0	chr8	+	945	5	FSM	ENSMUSG00000110623.2	ENSMUST00000212446.2	959	5	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACTTCACTGTTGAGTA	NA	NA	NA	NA	NA	NA	NA	NA	97036150	97088141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_97036249_97081022_97081164_97084483_97084667_97085161_97085357_97087813
ENSMUSG00000110656.2_0	chr8	-	1958	2	FSM	ENSMUSG00000110656.2	ENSMUST00000212077.2	1979	2	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTACAACATTTGATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	123178046	123172012	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_123173829_123177904
ENSMUSG00000110686.2_0	chr8	-	871	1	FSM	ENSMUSG00000110686.2	ENSMUST00000212546.2	880	1	2	7	2	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACATAAGGGTTTTTATA	NA	NA	NA	NA	NA	NA	NA	NA	106312830	106311959	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_106312000_106312800
ENSMUSG00000110773.2_0	chr9	+	446	3	FSM	ENSMUSG00000110773.2	ENSMUST00000213473.2	453	3	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGCAGCCAAAGATGACACT	NA	NA	NA	NA	NA	NA	NA	NA	44793048	44795689	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_44793231_44793784_44794002_44795642
ENSMUSG00000110779.2_0	chr10	-	3474	1	FSM	ENSMUSG00000110779.2	ENSMUST00000215028.2	3497	1	18	5	18	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGAAACTGAACGTCTGA	NA	NA	NA	NA	NA	NA	NA	NA	50172220	50168746	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_50168700_50172200
ENSMUSG00000110830.2_0	chr10	-	788	2	FSM	ENSMUSG00000110830.2	ENSMUST00000215448.2	801	2	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCCAGGGAAAACGTTTCA	NA	NA	NA	NA	NA	NA	NA	NA	29189811	29173932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_29174142_29189232
ENSMUSG00000110834.2_0	chr9	-	447	4	FSM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGTAGAAAATCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	124044762	124032994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_124033196_124033755_124033817_124033999_124034127_124044704
ENSMUSG00000110834.2_1	chr9	-	377	3	ISM	ENSMUSG00000110834.2	ENSMUST00000214845.2	461	4	10655	7	10655	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTGTAGAAAATCCCTAT	NA	NA	NA	NA	NA	NA	NA	NA	124034114	124032994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_-_124033196_124033755_124033817_124033999
ENSMUSG00000110841.2_0	chr10	+	745	1	FSM	ENSMUSG00000110841.2	ENSMUST00000217344.2	782	1	8	29	8	-29	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAATGTGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45751408	45752153	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_45751400_45752200
ENSMUSG00000110847.2_0	chr10	-	1000	2	FSM	ENSMUSG00000110847.2	ENST00000611884.5	1014	2	5	9	5	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	5150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAAAGGCCGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91095711	91094388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_91095227_91095549
ENSMUSG00000110847.2_1	chr10	-	656	2	FSM	ENSMUSG00000110847.2	ENST00000312179.10	676	2	11	9	-9	6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAAAAGGCCGGTTCCTG	NA	NA	NA	NA	NA	NA	NA	NA	91095215	91094388	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_91094779_91094949
ENSMUSG00000110866.2_0	chr9	-	3200	3	FSM	ENSMUSG00000110866.2	ENSMUST00000216055.2	3205	3	4	1	4	-1	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCAAGGTGTTGTGTTCT	NA	NA	NA	NA	NA	NA	NA	NA	25770944	25766611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_25769135_25769705_25769859_25770420
ENSMUSG00000110945.2_0	chr9	-	2570	1	FSM	ENSMUSG00000110945.2	ENSMUST00000217077.2	2578	1	7	1	7	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCGTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	122850630	122848060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_122848100_122850600
ENSMUSG00000111017.2_0	chr9	-	2700	1	FSM	ENSMUSG00000111017.2	ENSMUST00000213541.2	2739	1	23	16	23	-16	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAACAAAACATCAAAG	NA	NA	NA	NA	NA	NA	NA	NA	44770450	44767750	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_44767800_44770400
ENSMUSG00000111045.2_0	chr10	-	2999	1	FSM	ENSMUSG00000111045.2	ENSMUST00000214034.2	3036	1	30	7	30	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTTGGGAAGAGAAAGGT	NA	NA	NA	NA	NA	NA	NA	NA	40059658	40056659	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_40056700_40059700
ENSMUSG00000111080.2_0	chr10	-	3416	1	FSM	ENSMUSG00000111080.2	ENSMUST00000214634.2	3440	1	17	7	17	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACATTTTTAGTGTA	NA	NA	NA	NA	NA	NA	NA	NA	30482613	30479197	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_30479200_30482600
ENSMUSG00000111128.2_0	chr9	-	2018	1	FSM	ENSMUSG00000111128.2	ENSMUST00000216609.2	2079	1	33	28	33	-28	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCTCAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45771947	45769929	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_45769900_45771900
ENSMUSG00000111202.2_0	chr10	-	278	1	FSM	ENSMUSG00000111202.2	ENSMUST00000213811.2	287	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATGAGCAGAGAGAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	50301426	50301148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_50301100_50301400
ENSMUSG00000111273.2_0	chr10	+	4186	2	FSM	ENSMUSG00000111273.2	ENSMUST00000213236.2	4235	2	37	12	29	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAATCAAACAAAGTATC	NA	NA	NA	NA	NA	NA	NA	NA	129320657	129326399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_129321133_129322688
ENSMUSG00000111273.2_1	chr10	+	4356	3	FSM	ENSMUSG00000111273.2	ENSMUST00000213992.2	4421	3	51	14	51	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAATCAAACAAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	129320679	129326397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_129321133_129322233_129322428_129322688
ENSMUSG00000111296.2_0	chr9	+	357	2	FSM	ENSMUSG00000111296.2	ENSMUST00000214235.2	364	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTCTCTCTTTTGGTCC	NA	NA	NA	NA	NA	NA	NA	NA	60241424	60242244	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_60241603_60242065
ENSMUSG00000111339.2_0	chr7	+	666	4	FSM	ENSMUSG00000111339.2	ENST00000490830.5	681	4	10	5	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCCGTCTGTGATGCTGG	NA	NA	NA	NA	NA	NA	NA	NA	101885308	101886736	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_+_101885554_101885654_101885838_101886328_101886438_101886607
ENSMUSG00000111341.2_0	chr9	-	3095	1	FSM	ENSMUSG00000111341.2	ENSMUST00000217162.2	3116	1	9	12	9	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGTAAACACTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121675994	121672899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121672900_121676000
ENSMUSG00000111375.5_0	chr5	+	5227	18	FSM	ENSMUSG00000111375.5	ENSMUST00000211896.2	5256	18	24	5	24	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGAGTCTCAGCAGTCG	NA	NA	NA	NA	NA	NA	NA	NA	107585886	107658682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_107586012_107593728_107593924_107599854_107600052_107609303_107609422_107618573_107618664_107632912_107632994_107633622_107633720_107638528_107638618_107639344_107639448_107643736_107643920_107644601_107644740_107645586_107645717_107647892_107647955_107651204_107651881_107652369_107652461_107652856_107652997_107654741_107656989_107658217
ENSMUSG00000111389.2_0	chr9	-	9801	2	FSM	ENSMUSG00000111389.2	ENSMUST00000213810.2	9813	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCCTTTCTCTTCCTCGC	NA	NA	NA	NA	NA	NA	NA	NA	121880524	121848600	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_121858155_121880277
ENSMUSG00000111390.2_0	chr9	+	3530	2	FSM	ENSMUSG00000111390.2	ENSMUST00000217654.2	3539	2	2	7	2	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCCACATGAAAAAGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	27009848	27013632	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_27012958_27013211
ENSMUSG00000111421.2_0	chr9	-	3185	1	FSM	ENSMUSG00000111421.2	ENSMUST00000214258.2	3236	1	38	13	38	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAATAAATCTTAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37210619	37207434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37207400_37210600
ENSMUSG00000111465.2_0	chr9	+	9497	4	FSM	ENSMUSG00000111465.2	ENSMUST00000213591.2	9507	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACCTTACTGGGACATC	NA	NA	NA	NA	NA	NA	NA	NA	121698564	121708995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_121698876_121698947_121699009_121699399_121699571_121700041
ENSMUSG00000111481.2_0	chr9	-	4644	1	FSM	ENSMUSG00000111481.2	ENSMUST00000217345.2	4663	1	12	7	12	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAGGATGTTGGGTGACT	NA	NA	NA	NA	NA	NA	NA	NA	37245713	37241069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_37241100_37245700
ENSMUSG00000111485.2_0	chr9	+	3829	1	FSM	ENSMUSG00000111485.2	ENSMUST00000216568.2	3841	1	2	10	2	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGGATATTAGCCCAAAA	NA	NA	NA	NA	NA	NA	NA	NA	36583994	36587823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_36584000_36587800
ENSMUSG00000111497.2_0	chr9	-	2965	17	FSM	ENSMUSG00000111497.2	ENSMUST00000217359.2	2988	17	15	8	15	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCTCCGACATGTTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	21003278	20978817	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_20979222_20979325_20979414_20984370_20984478_20984559_20984615_20986586_20986793_20986880_20986965_20987259_20987404_20987862_20987938_20990504_20990811_20990896_20991109_20991379_20991468_20992000_20992114_20992270_20992401_20992479_20992672_20997540_20998011_21001545_21001613_21003054
ENSMUSG00000111503.2_0	chr9	-	662	2	FSM	ENSMUSG00000111503.2	ENSMUST00000214628.2	681	2	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCACCTCCTCTTTGGA	NA	NA	NA	NA	NA	NA	NA	NA	11584836	11516871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_11517350_11584652
ENSMUSG00000111521.2_0	chr9	+	1588	5	Fusion	ENSMUSG00000035382.10_ENSMUSG00000111521.2	novel	695	3	NA	NA	-493	2311	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACACCAAGTTGGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	45840916	45847347	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr9_+_45841813_45842129_45842231_45842594_45842776_45842879_45843077_45847134
ENSMUSG00000111524.2_0	chr10	+	359	2	FSM	ENSMUSG00000111524.2	ENSMUST00000213796.2	388	2	18	11	18	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAGAATTTATATG	NA	NA	NA	NA	NA	NA	NA	NA	83928147	83932102	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83928274_83931869
ENSMUSG00000111556.2_0	chr9	+	1405	3	FSM	ENSMUSG00000111556.2	ENSMUST00000215724.2	1435	3	22	8	22	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTTTGTCTTTGATTG	NA	NA	NA	NA	NA	NA	NA	NA	67040864	67071062	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_67040963_67064307_67064463_67069910
ENSMUSG00000111709.2_0	chr9	+	862	7	FSM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATATGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78164415	78176441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_78164486_78165971_78166081_78168837_78168890_78169683_78169817_78173249_78173392_78175291_78175424_78176217
ENSMUSG00000111709.2_3	chr9	+	795	6	ISM	ENSMUSG00000111709.2	ENSMUST00000217203.2	874	7	1558	7	1558	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATATGCTCCTCAT	NA	NA	NA	NA	NA	NA	NA	NA	78165968	78176441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr9_+_78166081_78168837_78168890_78169683_78169817_78173249_78173392_78175291_78175424_78176217
ENSMUSG00000111712.2_0	chr9	+	709	2	FSM	ENSMUSG00000111712.2	ENSMUST00000214251.2	723	2	5	9	5	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTTATAGAAAAGGGATG	NA	NA	NA	NA	NA	NA	NA	NA	65239806	65252880	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_65239903_65252267
ENSMUSG00000111758.2_0	chr9	-	3479	3	FSM	ENSMUSG00000111758.2	ENSMUST00000215774.2	3500	3	18	3	18	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTGATGGGAGCCATTG	NA	NA	NA	NA	NA	NA	NA	NA	43881532	43836050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_43839190_43852050_43852155_43881296
ENSMUSG00000111824.2_0	chr9	+	3084	1	FSM	ENSMUSG00000111824.2	ENSMUST00000215114.2	3107	1	15	8	15	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAGACAAAAAGACCACCA	NA	NA	NA	NA	NA	NA	NA	NA	104964288	104967372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_104964300_104967400
ENSMUSG00000111854.2_0	chr9	-	1798	4	FSM	ENSMUSG00000111854.2	ENSMUST00000213487.2	1801	4	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCTCTACCAATGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	41470552	41462801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_-_41463192_41466572_41466800_41468667_41468763_41469466
ENSMUSG00000111888.2_0	chr10	+	985	2	FSM	ENSMUSG00000111888.2	ENSMUST00000220256.2	1003	2	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGAGACCCATTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	14420238	14426762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_14421099_14426637
ENSMUSG00000111928.2_0	chr12	+	3828	1	FSM	ENSMUSG00000111928.2	ENSMUST00000220310.2	3842	1	11	3	11	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAGCCCAAAACCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	11040364	11044192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_11040400_11044200
ENSMUSG00000112022.3_1	chr12	-	834	8	FSM	ENSMUSG00000112022.3	ENSMUST00000219562.3	850	8	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55201670	55188898	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55189069_55190157_55190218_55192016_55192155_55195887_55196025_55196405_55196482_55196565_55196622_55197660_55197794_55201606
ENSMUSG00000112034.2_0	chr10	+	4841	1	FSM	ENSMUSG00000112034.2	ENSMUST00000219276.2	4850	1	9	0	9	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCTCAGGGAACTCTCC	NA	NA	NA	NA	NA	NA	NA	NA	105910096	105914937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_105910100_105914900
ENSMUSG00000112038.2_0	chr12	+	3841	1	FSM	ENSMUSG00000112038.2	ENSMUST00000219963.2	3845	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAGCCCAGAAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	44168538	44172379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_44168500_44172400
ENSMUSG00000112071.2_0	chr12	-	2614	2	FSM	ENSMUSG00000112071.2	ENSMUST00000218836.2	2620	2	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTGAAAAAAGAAAGGAAG	NA	NA	NA	NA	NA	NA	NA	NA	32173699	32163671	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_32166207_32173620
ENSMUSG00000112071.2_1	chr12	-	2522	1	ISM	ENSMUSG00000112071.2	ENSMUST00000218836.2	2620	2	7501	11	7501	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAGGGCAAGTGAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	32166200	32163678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_32163700_32166200
ENSMUSG00000112095.2_0	chr10	-	2538	3	FSM	ENSMUSG00000112095.2	ENSMUST00000219429.2	2547	3	6	3	6	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGATTGGGGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	122405790	122400930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_122403283_122403695_122403836_122405744
ENSMUSG00000112095.2_1	chr10	-	2485	2	ISM	ENSMUSG00000112095.2	ENSMUST00000219429.2	2547	3	1968	3	1968	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATTGATTGGGGTTTCCC	NA	NA	NA	NA	NA	NA	NA	NA	122403828	122400930	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_122403283_122403695
ENSMUSG00000112096.2_0	chr12	-	822	1	FSM	ENSMUSG00000112096.2	ENSMUST00000220077.2	857	1	29	6	29	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAAGTGTCCCACACT	NA	NA	NA	NA	NA	NA	NA	NA	76392126	76391304	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_76391300_76392100
ENSMUSG00000112099.2_0	chr10	-	777	2	FSM	ENSMUSG00000112099.2	ENST00000435535.1	785	2	1	7	1	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATCAGTGTAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	115436231	115434944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_115435661_115436170
ENSMUSG00000112099.2_1	chr10	-	716	1	NIC	ENSMUSG00000112099.2	novel	788	2	NA	NA	572	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATCAGTGTAAAATCCA	NA	NA	NA	NA	NA	NA	NA	NA	115435660	115434944	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_115434900_115435700
ENSMUSG00000112117.3_0	chr10	-	1857	12	FSM	ENSMUSG00000112117.3	ENST00000665975.1	1882	12	11	14	11	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	534	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAGAAAAGACTTCGAGG	NA	NA	NA	NA	NA	NA	NA	NA	92001163	91907112	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_91907161_91911031_91911275_91911374_91911533_91919583_91919836_91939567_91939773_91970103_91970255_91970825_91970938_91971562_91971707_91972418_91972553_91997966_91998027_92000488_92000635_92000959
ENSMUSG00000112134.2_0	chr10	+	589	4	FSM	ENSMUSG00000112134.2	ENSMUST00000219407.2	603	4	6	8	6	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGAATACTTCTTATCACC	NA	NA	NA	NA	NA	NA	NA	NA	83180382	83186935	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_83180563_83185918_83186165_83186398_83186496_83186869
ENSMUSG00000112150.2_0	chr12	-	2596	1	FSM	ENSMUSG00000112150.2	ENSMUST00000219513.2	2599	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCACAAGAAAAAAAAATTT	NA	NA	NA	NA	NA	NA	NA	NA	77285437	77282841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_77282800_77285400
ENSMUSG00000112160.2_0	chr10	+	2717	4	FSM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATGATAATTATATACT	NA	NA	NA	NA	NA	NA	NA	NA	81919186	81947041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81919247_81943643_81943771_81943972_81944034_81944572
ENSMUSG00000112160.2_1	chr10	+	2658	3	ISM	ENSMUSG00000112160.2	ENSMUST00000220287.2	2726	4	24456	9	24456	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATGATAATTATATACT	NA	NA	NA	NA	NA	NA	NA	NA	81943642	81947041	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_81943771_81943972_81944034_81944572
ENSMUSG00000112172.2_0	chr10	+	623	3	FSM	ENSMUSG00000112172.2	ENSMUST00000220029.2	633	3	6	4	6	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATCATAGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	13747029	13754948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_13747049_13753861_13754094_13754576
ENSMUSG00000112172.2_1	chr10	+	606	2	ISM	ENSMUSG00000112172.2	ENSMUST00000220029.2	633	3	6836	4	6836	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTATCATAGGTTGATGA	NA	NA	NA	NA	NA	NA	NA	NA	13753859	13754948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_13754094_13754576
ENSMUSG00000112218.2_0	chr12	+	1079	2	FSM	ENSMUSG00000112218.2	ENST00000605309.1	1098	2	12	7	12	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAGTGAAGGATGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	32760278	32762521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_32760940_32762103
ENSMUSG00000112226.2_0	chr10	+	3784	1	FSM	ENSMUSG00000112226.2	ENSMUST00000219702.2	3814	1	19	11	19	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGTGGATATTAGCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	51419149	51422933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_51419100_51422900
ENSMUSG00000112255.2_0	chr10	+	4139	1	FSM	ENSMUSG00000112255.2	ENSMUST00000219114.2	4154	1	4	11	4	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGTTAATAATTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	61406693	61410832	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_61406700_61410800
ENSMUSG00000112266.2_0	chr10	+	1567	4	FSM	ENSMUSG00000112266.2	ENSMUST00000218190.2	1590	4	21	2	21	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	14072779	14082563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_14072839_14074473_14074662_14075516_14075599_14081325
ENSMUSG00000112266.2_1	chr10	+	1509	3	ISM	ENSMUSG00000112266.2	ENSMUST00000218190.2	1590	4	1714	2	1714	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTTCTTGGTCATGA	NA	NA	NA	NA	NA	NA	NA	NA	14074472	14082563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_14074662_14075516_14075599_14081325
ENSMUSG00000112287.2_0	chr10	+	2567	1	FSM	ENSMUSG00000112287.2	ENSMUST00000219397.2	2571	1	0	4	0	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACATAGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	119307222	119309789	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_119307200_119309800
ENSMUSG00000112336.2_0	chr12	+	703	2	FSM	ENSMUSG00000112336.2	ENSMUST00000218666.2	735	2	32	0	32	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACGCCACCGCCCACTCC	NA	NA	NA	NA	NA	NA	NA	NA	80306248	80307331	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_80306403_80306782
ENSMUSG00000112342.2_1	chr10	+	2266	1	FSM	ENSMUSG00000112342.2	ENSMUST00000219521.2	2282	1	2	14	2	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAAAAAAATGGAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102155475	102157741	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_102155500_102157700
ENSMUSG00000112355.2_0	chr12	-	1976	1	FSM	ENSMUSG00000112355.2	ENSMUST00000219078.2	2020	1	38	6	38	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCCAAAAGGATAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	59767077	59765101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_59765100_59767100
ENSMUSG00000112430.2_0	chr10	+	608	4	FSM	ENSMUSG00000112430.2	ENSMUST00000220039.2	628	4	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAACCTGGTGGTAAAGCG	NA	NA	NA	NA	NA	NA	NA	NA	111561103	111678948	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_111561275_111563274_111563434_111566500_111566660_111678829
ENSMUSG00000112449.2_1	chr12	+	3628	16	FSM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	9	9	9	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	2019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAAATTTACCATTCTTAG	NA	NA	NA	NA	NA	NA	NA	NA	55201897	55236349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_55202366_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_21	chr12	+	1959	16	NNC	ENSMUSG00000112449.2	novel	3646	16	NA	NA	216	-1260	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55202104	55235098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_55202155_55211014_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112449.2_27	chr12	+	1910	15	ISM	ENSMUSG00000112449.2	ENSMUST00000110708.4	3646	16	9125	1260	9125	-1260	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAACTTCAAGTGATA	NA	NA	NA	NA	NA	NA	NA	NA	55211013	55235098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_55211125_55211980_55212073_55213093_55213179_55217659_55217765_55218953_55219021_55219100_55219159_55221757_55221909_55223184_55223334_55223667_55223769_55224312_55224400_55227035_55227110_55227461_55227571_55230346_55230518_55232930_55233027_55234644
ENSMUSG00000112547.2_0	chr12	-	2069	2	FSM	ENSMUSG00000112547.2	ENSMUST00000219127.2	2086	2	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGAGAAACCCTGTCTC	NA	NA	NA	NA	NA	NA	NA	NA	44315892	44267177	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_44269142_44315787
ENSMUSG00000112557.2_0	chr10	-	3226	1	FSM	ENSMUSG00000112557.2	ENSMUST00000219916.2	3238	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAAAATGGGGCTCAG	NA	NA	NA	NA	NA	NA	NA	NA	51865675	51862449	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_51862400_51865700
ENSMUSG00000112610.2_0	chr10	-	1946	5	FSM	ENSMUSG00000112610.2	ENSMUST00000218769.2	1961	5	7	8	7	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGATTGTTGTGCTAGT	NA	NA	NA	NA	NA	NA	NA	NA	27574316	27522316	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_27522996_27527300_27527394_27529678_27529776_27547678_27547781_27573341
ENSMUSG00000112622.2_0	chr10	-	5474	1	FSM	ENSMUSG00000112622.2	ENSMUST00000220380.2	5690	1	208	8	208	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCCTAGTCGGCCATCAC	NA	NA	NA	NA	NA	NA	NA	NA	103049090	103043616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_103043600_103049100
ENSMUSG00000112627.2_0	chr10	+	652	3	FSM	ENSMUSG00000112627.2	ENSMUST00000220251.2	676	3	18	6	-3	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGCAAGGACTGTCTCTC	NA	NA	NA	NA	NA	NA	NA	NA	116786489	116795203	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116786598_116791432_116791563_116794789
ENSMUSG00000112627.2_1	chr10	+	1682	4	FSM	ENSMUSG00000112627.2	ENSMUST00000217853.2	1698	4	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCGATAATCCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116786502	116799178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_116786598_116790417_116790631_116791432_116791563_116797934
ENSMUSG00000112627.2_4	chr10	+	1588	3	ISM	ENSMUSG00000112627.2	ENSMUST00000217853.2	1698	4	3924	6	3924	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCGATAATCCTTGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	116790416	116799178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_116790631_116791432_116791563_116797934
ENSMUSG00000112639.2_0	chr10	+	1754	2	FSM	ENSMUSG00000112639.2	ENSMUST00000217956.2	1770	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTATACTATAGCTGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	126906251	126910657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_126907477_126910128
ENSMUSG00000112640.2_0	chr10	+	2369	4	FSM	ENSMUSG00000112640.2	ENSMUST00000220314.2	2379	4	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAATGATATTTATA	NA	NA	NA	NA	NA	NA	NA	NA	81699770	81716908	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81699844_81713862_81713990_81714188_81714250_81714800
ENSMUSG00000112640.2_1	chr10	+	2291	3	ISM	ENSMUSG00000112640.2	ENSMUST00000220314.2	2379	4	14094	13	14094	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTTCAAATGAAAATGATA	NA	NA	NA	NA	NA	NA	NA	NA	81713861	81716902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_81713990_81714188_81714250_81714800
ENSMUSG00000112647.2_0	chr10	-	2584	2	FSM	ENSMUSG00000112647.2	ENSMUST00000217680.2	2591	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGTAATGGTGCCCATC	NA	NA	NA	NA	NA	NA	NA	NA	98535572	98489667	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_98492155_98535475
ENSMUSG00000112647.2_1	chr10	-	2482	1	NIC	ENSMUSG00000112647.2	novel	2591	2	NA	NA	43415	-15	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAGAGACTGTAATGG	NA	NA	NA	NA	NA	NA	NA	NA	98492157	98489675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr10_-_98489700_98492200
ENSMUSG00000112664.2_0	chr12	-	1409	1	FSM	ENSMUSG00000112664.2	ENSMUST00000219269.2	1415	1	6	0	6	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCCAGCTGGCCAGGGTC	NA	NA	NA	NA	NA	NA	NA	NA	8504912	8503503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_8503500_8504900
ENSMUSG00000112689.2_0	chr10	-	3835	1	FSM	ENSMUSG00000112689.2	ENSMUST00000219160.2	3838	1	0	3	0	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTAGCCCAAAACTTAG	NA	NA	NA	NA	NA	NA	NA	NA	78534642	78530807	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_78530800_78534600
ENSMUSG00000112690.3_0	chr12	-	747	7	ISM	ENSMUSG00000112690.3	ENSMUST00000220144.3	847	8	3913	0	3913	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTTTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55272832	55263960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_55264133_55265221_55265282_55267080_55267219_55270951_55271089_55271469_55271546_55271629_55271686_55272724
ENSMUSG00000112690.3_1	chr12	-	820	8	FSM	ENSMUSG00000112690.3	ENSMUST00000220144.3	847	8	25	2	25	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGATCTTTTTTTTTTTTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55276720	55263962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_55264133_55265221_55265282_55267080_55267219_55270951_55271089_55271469_55271546_55271629_55271686_55272724_55272858_55276670
ENSMUSG00000112693.2_0	chr19	+	1512	1	FSM	ENSMUSG00000112693.2	ENSMUST00000220222.2	1522	1	0	10	0	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTGAAGCAGGCAGATCC	NA	NA	NA	NA	NA	NA	NA	NA	12882683	12884195	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_12882700_12884200
ENSMUSG00000112716.2_0	chr10	-	1494	2	FSM	ENSMUSG00000112716.2	ENSMUST00000219022.2	1514	2	14	6	14	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCCAAATTAGGAGTCCC	NA	NA	NA	NA	NA	NA	NA	NA	120471807	120468933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_120469113_120470492
ENSMUSG00000112721.2_0	chr10	+	2366	1	FSM	ENSMUSG00000112721.2	ENSMUST00000218472.2	2370	1	4	0	4	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAAGGACCACAGAGCAT	NA	NA	NA	NA	NA	NA	NA	NA	76520269	76522635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_76520300_76522600
ENSMUSG00000112745.2_0	chr10	-	1820	2	FSM	ENSMUSG00000112745.2	ENSMUST00000219321.2	1823	2	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTGTTGCTGGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	70828867	70811335	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_70812895_70828606
ENSMUSG00000112765.2_0	chr12	-	1078	3	FSM	ENSMUSG00000112765.2	ENSMUST00000218818.2	1082	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGACACTTGGAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79971507	79963796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_79964698_79970908_79971013_79971434
ENSMUSG00000112765.2_1	chr12	-	1006	2	ISM	ENSMUSG00000112765.2	ENSMUST00000218818.2	1082	3	494	4	494	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGACACTTGGAAAAGAAT	NA	NA	NA	NA	NA	NA	NA	NA	79971013	79963796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_79964698_79970908
ENSMUSG00000112822.2_0	chr10	+	3111	1	FSM	ENSMUSG00000112822.2	ENSMUST00000218674.2	3135	1	21	3	21	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATGAAAACAAGGAAATAATA	NA	NA	NA	NA	NA	NA	NA	NA	115230675	115233786	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_115230700_115233800
ENSMUSG00000112854.2_0	chr10	-	2329	4	FSM	ENSMUSG00000112854.2	ENSMUST00000219032.2	2357	4	16	12	16	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAGAAAAGTCAAAAGATG	NA	NA	NA	NA	NA	NA	NA	NA	118763032	118756297	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_118757936_118761454_118761550_118762005_118762516_118762946
ENSMUSG00000112855.2_0	chr10	-	3730	1	FSM	ENSMUSG00000112855.2	ENSMUST00000220106.2	3764	1	26	8	26	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGATATTAGCCCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	33203745	33200015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_33200000_33203700
ENSMUSG00000112856.2_0	chr10	+	908	1	FSM	ENSMUSG00000112856.2	ENSMUST00000219159.2	910	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAACGGGACCCAGAGGCT	NA	NA	NA	NA	NA	NA	NA	NA	100186954	100187862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100187000_100187900
ENSMUSG00000112868.2_0	chr10	-	383	2	FSM	ENSMUSG00000112868.2	ENSMUST00000219522.2	388	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATTCAGATTCAAGGGTT	NA	NA	NA	NA	NA	NA	NA	NA	23498046	23489424	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_23489780_23498018
ENSMUSG00000112868.2_1	chr10	-	343	1	ISM	ENSMUSG00000112868.2	ENSMUST00000219522.2	388	2	8270	14	8270	-14	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGATTATTCAGAT	NA	NA	NA	NA	NA	NA	NA	NA	23489776	23489433	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_-_23489400_23489800
ENSMUSG00000112879.2_0	chr10	-	351	1	FSM	ENSMUSG00000112879.2	ENSMUST00000219693.2	361	1	7	3	7	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCATTCTGGTTCATC	NA	NA	NA	NA	NA	NA	NA	NA	123014582	123014231	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_123014200_123014600
ENSMUSG00000112907.2_0	chr10	-	2687	2	FSM	ENSMUSG00000112907.2	ENSMUST00000217947.2	2709	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	557	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCGAGTGTGTCCTGTGTG	NA	NA	NA	NA	NA	NA	NA	NA	79253723	79248801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_-_79251194_79253428
ENSMUSG00000112920.2_0	chr11	+	1268	9	FSM	ENSMUSG00000112920.2	ENSMUST00000092926.11	1274	9	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCTTTTTATAAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	73220568	73236866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_73220602_73221913_73222021_73224123_73224253_73226835_73226897_73227020_73227117_73231076_73231411_73234562_73234687_73235471_73235570_73236580
ENSMUSG00000112920.2_2	chr11	+	1233	8	ISM	ENSMUSG00000112920.2	ENSMUST00000092926.11	1274	9	1349	4	1349	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTCTTTTTATAAAAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	73221915	73236866	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr11_+_73222021_73224123_73224253_73226835_73226897_73227020_73227117_73231076_73231411_73234562_73234687_73235471_73235570_73236580
ENSMUSG00000112925.2_0	chr10	+	1019	7	FSM	ENSMUSG00000112925.2	ENSMUST00000219739.2	1025	7	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTATATATATAAGTACAC	NA	NA	NA	NA	NA	NA	NA	NA	66840855	66877101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_66840909_66859175_66859269_66865814_66865894_66872242_66872423_66875789_66875910_66876453_66876585_66876738
ENSMUSG00000112925.2_3	chr10	+	964	6	ISM	ENSMUSG00000112925.2	ENSMUST00000219739.2	1025	7	18320	8	-4970	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATTTATATATATAAGT	NA	NA	NA	NA	NA	NA	NA	NA	66859173	66877097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr10_+_66859269_66865814_66865894_66872242_66872423_66875789_66875910_66876453_66876585_66876738
ENSMUSG00000112931.2_0	chr10	+	898	1	FSM	ENSMUSG00000112931.2	ENSMUST00000218922.2	910	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGCCCAACAACGGGA	NA	NA	NA	NA	NA	NA	NA	NA	100181833	100182731	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_100181800_100182700
ENSMUSG00000112947.2_0	chr13	-	4662	1	FSM	ENSMUSG00000112947.2	ENSMUST00000220599.2	4714	1	49	3	49	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAACCTCTGAGCCCTTTC	NA	NA	NA	NA	NA	NA	NA	NA	12066892	12062230	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_12062200_12066900
ENSMUSG00000112950.2_0	chr12	-	1459	4	FSM	ENSMUSG00000112950.2	ENSMUST00000222630.2	1467	4	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAATGCAGCTTCATATG	NA	NA	NA	NA	NA	NA	NA	NA	70728624	70722628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_70723576_70726608_70726690_70726867_70727201_70728526
ENSMUSG00000112964.2_0	chr13	-	1498	5	FSM	ENSMUSG00000112964.2	ENSMUST00000220632.2	1513	5	0	15	0	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATACATAAAAGAATACAT	NA	NA	NA	NA	NA	NA	NA	NA	74611548	74595674	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74596679_74598074_74598136_74598354_74598482_74610700_74610786_74611327
ENSMUSG00000112980.2_0	chr12	-	2925	2	FSM	ENSMUSG00000112980.2	ENSMUST00000220477.2	2941	2	11	5	11	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACAACAAATAAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	116368819	116365571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_116368264_116368586
ENSMUSG00000112990.2_0	chr12	-	3537	1	FSM	ENSMUSG00000112990.2	ENSMUST00000221845.2	3544	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAAAAGAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	98618733	98615196	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98615200_98618700
ENSMUSG00000113004.2_0	chr13	+	3721	1	FSM	ENSMUSG00000113004.2	ENSMUST00000221635.2	3737	1	10	6	10	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGGGATGTGCACAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	4418689	4422410	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_4418700_4422400
ENSMUSG00000113030.2_0	chr13	-	228	2	ISM	ENSMUSG00000075054.6	ENST00000448268.5	326	3	1523	6	1354	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCGTCAGACCAAGCGA	NA	NA	NA	NA	NA	NA	NA	NA	18166334	18164184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_18164291_18166212
ENSMUSG00000113031.2_0	chr12	-	624	3	FSM	ENSMUSG00000113031.2	ENSMUST00000223381.2	636	3	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGAGGAGGAGGAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	74363925	74360975	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_74361283_74362065_74362187_74363729
ENSMUSG00000113032.2_0	chr10	+	6018	2	FSM	ENSMUSG00000113032.2	ENSMUST00000222959.2	6046	2	24	4	24	-4	multi-exon	TRUE	canonical	NA	NA	NA	NA	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGGCAGGCGCTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	99555028	99727016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_99560612_99726581
ENSMUSG00000113032.2_3	chr10	+	6032	3	NNC	ENSMUSG00000113032.2	novel	6046	2	NA	NA	10	-3	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGGCAGGCGCTGTGTT	NA	NA	NA	NA	NA	NA	NA	NA	99555014	99727017	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr10_+_99560415_99574906_99574914_99726392
ENSMUSG00000113061.2_0	chr13	+	592	1	FSM	ENSMUSG00000113061.2	ENSMUST00000223428.2	607	1	7	8	7	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	233	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATACCTATGAAAAAAATT	NA	NA	NA	NA	NA	NA	NA	NA	28441517	28442109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_28441500_28442100
ENSMUSG00000113076.2_0	chr13	+	1618	1	FSM	ENSMUSG00000113076.2	ENSMUST00000223326.2	1639	1	11	10	11	-10	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAGAGAGAGAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	93453945	93455563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_93453900_93455600
ENSMUSG00000113100.2_0	chr13	+	3657	2	FSM	ENSMUSG00000113100.2	ENSMUST00000221683.2	3661	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGAGACTATTCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	18106970	18113015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_18107086_18109473
ENSMUSG00000113100.2_1	chr13	+	3542	1	ISM	ENSMUSG00000113100.2	ENSMUST00000221683.2	3661	2	2503	4	2503	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTAGAGACTATTCATAAC	NA	NA	NA	NA	NA	NA	NA	NA	18109473	18113015	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_18109500_18113000
ENSMUSG00000113101.2_0	chr13	+	243	2	FSM	ENSMUSG00000113101.2	ENSMUST00000222317.2	257	2	2	12	2	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGACAGAGCTTGCTTC	NA	NA	NA	NA	NA	NA	NA	NA	53170239	53172209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_53170320_53172046
ENSMUSG00000113106.2_0	chr12	-	2144	1	FSM	ENSMUSG00000113106.2	ENSMUST00000221888.2	2158	1	5	9	5	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATTTAAAGGAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99328282	99326138	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_99326100_99328300
ENSMUSG00000113170.2_0	chr13	-	2086	2	FSM	ENSMUSG00000113170.2	ENSMUST00000222088.2	2093	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	35059415	35056501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_35058552_35059379
ENSMUSG00000113170.2_1	chr13	-	2024	1	ISM	ENSMUSG00000113170.2	ENSMUST00000222088.2	2093	2	890	7	890	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAACCAAAATAATAATAA	NA	NA	NA	NA	NA	NA	NA	NA	35058525	35056501	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_35056500_35058500
ENSMUSG00000113204.2_0	chr13	-	1697	7	FSM	ENSMUSG00000113204.2	ENSMUST00000222254.2	1703	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGAGTTGCCATGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	74765429	74753069	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74754137_74755804_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842_74761068_74765320
ENSMUSG00000113204.2_1	chr13	-	1592	6	ISM	ENSMUSG00000113204.2	ENSMUST00000222254.2	1703	7	4361	3	4289	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTTGCCATGGTCATGAT	NA	NA	NA	NA	NA	NA	NA	NA	74761068	74753066	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_74754137_74755804_74755855_74757240_74757302_74758318_74758446_74759382_74759441_74760842
ENSMUSG00000113204.2_3	chr13	-	1963	6	FSM	ENSMUSG00000113204.2	ENSMUST00000220478.2	1989	6	12	14	12	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTTTAGAAAAAACCCTTA	NA	NA	NA	NA	NA	NA	NA	NA	74765809	74754917	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_74755855_74757240_74757302_74758318_74758446_74759382_74759507_74760842_74761068_74765320
ENSMUSG00000113259.2_0	chr13	-	518	3	FSM	ENSMUSG00000113259.2	ENSMUST00000222335.2	526	3	5	3	5	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCTCCACCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	3816717	3812352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_3812647_3815899_3816069_3816662
ENSMUSG00000113259.2_1	chr13	-	451	2	ISM	ENSMUSG00000113259.2	ENSMUST00000222335.2	526	3	666	3	666	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTTCTCCACCCTGCAGA	NA	NA	NA	NA	NA	NA	NA	NA	3816056	3812352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_3812647_3815899
ENSMUSG00000113262.2_0	chr10	+	1429	5	FSM	ENSMUSG00000078440.11	ENSMUST00000072751.13	1444	5	11	4	11	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAAGTGCTGGCTCCTGCTG	NA	NA	NA	NA	NA	NA	NA	NA	81220272	81224182	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81220413_81221552_81221882_81222246_81222324_81223073_81223315_81223540
ENSMUSG00000113302.2_0	chr12	+	1813	5	FSM	ENSMUSG00000113302.2	ENSMUST00000221234.2	1819	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGTACCTTGCACTTTCAC	NA	NA	NA	NA	NA	NA	NA	NA	70569371	70591355	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70569692_70582292_70582506_70587155_70587370_70588568_70588947_70590667
ENSMUSG00000113322.2_0	chr13	-	2693	2	FSM	ENSMUSG00000113322.2	ENSMUST00000221385.2	2705	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGGCTAAAAAAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	16547760	16543535	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_16546119_16547650
ENSMUSG00000113362.2_0	chr12	-	2718	3	FSM	ENSMUSG00000113362.2	ENSMUST00000220782.2	2736	3	14	4	14	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAAATGTTTTCTTTTAT	NA	NA	NA	NA	NA	NA	NA	NA	100208689	100204274	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100205964_100206343_100206424_100207740
ENSMUSG00000113380.2_0	chr13	-	1168	2	FSM	ENSMUSG00000113380.2	ENSMUST00000220813.2	1209	2	32	9	32	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATACGTAATAATAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	13656958	13648936	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_13649852_13656705
ENSMUSG00000113389.2_0	chr13	+	488	1	FSM	ENSMUSG00000113389.2	ENSMUST00000223112.2	497	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCTAAATGAATATTACC	NA	NA	NA	NA	NA	NA	NA	NA	15293216	15293704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_15293200_15293700
ENSMUSG00000113393.2_0	chr12	+	1699	1	FSM	ENSMUSG00000113393.2	ENSMUST00000221219.2	1723	1	17	7	17	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCCAGGGATGCAGGG	NA	NA	NA	NA	NA	NA	NA	NA	63216983	63218682	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_63217000_63218700
ENSMUSG00000113424.2_0	chr13	+	1822	2	FSM	ENSMUSG00000113424.2	ENSMUST00000222575.2	1835	2	7	6	7	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGATTCTGGTTGTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	30554348	30561160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_30554700_30559689
ENSMUSG00000113440.2_0	chr13	-	4094	1	FSM	ENSMUSG00000113440.2	ENSMUST00000221461.2	4114	1	14	6	14	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTAACAATGTTTTATT	NA	NA	NA	NA	NA	NA	NA	NA	23630091	23625997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_23626000_23630100
ENSMUSG00000113450.2_0	chr13	-	2458	4	FSM	ENSMUSG00000113450.2	ENSMUST00000221747.2	2492	4	19	15	-7	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAATAATAATTATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62614627	62600844	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62603008_62604500_62604562_62604746_62604874_62614520
ENSMUSG00000113462.2_0	chr12	-	216	1	FSM	ENSMUSG00000113462.2	ENSMUST00000220847.2	233	1	14	3	14	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAATACTCCCACTGAT	NA	NA	NA	NA	NA	NA	NA	NA	111525430	111525214	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_111525200_111525400
ENSMUSG00000113476.2_0	chr12	-	2451	1	FSM	ENSMUSG00000113476.2	ENSMUST00000220829.2	2458	1	4	3	4	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAACAAAATAAATAACAG	NA	NA	NA	NA	NA	NA	NA	NA	13475714	13473263	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_13473300_13475700
ENSMUSG00000113491.2_0	chr12	+	1240	2	FSM	ENSMUSG00000113491.2	ENST00000513176.2	1246	2	0	6	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGCTGGCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70027881	70029239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_70027964_70028081
ENSMUSG00000113491.2_5	chr12	+	1197	2	NNC	ENSMUSG00000113491.2	novel	1246	2	NA	NA	93	-3	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTAGGCTGGCATTCTCTG	NA	NA	NA	NA	NA	NA	NA	NA	70027974	70029239	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_70028014_70028081
ENSMUSG00000113491.2_8	chr12	+	1152	1	ISM	ENSMUSG00000113491.2	ENSMUST00000221827.2	1477	2	422	9	200	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	108	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGAATTAGGCTGGCAT	NA	NA	NA	NA	NA	NA	NA	NA	70028081	70029233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_70028100_70029200
ENSMUSG00000113536.2_0	chr12	+	1528	2	FSM	ENSMUSG00000113536.2	ENSMUST00000221539.2	1538	2	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATAAACCAAGGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	17983164	17989619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17983863_17988789
ENSMUSG00000113536.2_1	chr12	+	1387	2	FSM	ENSMUSG00000113536.2	ENSMUST00000221062.2	1403	2	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATAAACCAAGGTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	17984698	17989620	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_17985255_17988789
ENSMUSG00000113570.2_0	chr12	+	2611	1	FSM	ENSMUSG00000113570.2	ENSMUST00000220644.2	2616	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATAGAAAAGATGAGA	NA	NA	NA	NA	NA	NA	NA	NA	19338567	19341178	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_19338600_19341200
ENSMUSG00000113581.2_0	chr12	-	150	1	FSM	ENSMUSG00000080356.3	ENSMUST00000116706.3	82	1	-2	-66	-2	66	mono-exon	FALSE	NA	NA	NA	NA	NA	556	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTACTTTCAACAGGGAA	NA	NA	NA	NA	NA	NA	NA	NA	110244565	110244415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110244400_110244600
ENSMUSG00000113585.2_0	chr12	-	599	1	NIC	ENSMUSG00000113585.2	novel	1084	4	NA	NA	7104	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTTCTTCTACAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	110443437	110442838	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr12_-_110442800_110443400
ENSMUSG00000113585.2_1	chr12	-	660	2	FSM	ENSMUSG00000113585.2	ENSMUST00000221712.2	677	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGTTCTTCTACAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	110450531	110442837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110443436_110450469
ENSMUSG00000113585.2_2	chr12	-	666	4	FSM	ENSMUSG00000113585.2	ENSMUST00000220603.2	686	4	11	9	11	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCACTAATCTGGGAGTT	NA	NA	NA	NA	NA	NA	NA	NA	110452039	110443256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110443436_110444793_110445058_110450469_110450642_110451988
ENSMUSG00000113585.2_3	chr12	-	584	3	ISM	ENSMUSG00000113585.2	ENSMUST00000220603.2	686	4	1439	10	-70	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCACTAATCTGGGAGT	NA	NA	NA	NA	NA	NA	NA	NA	110450611	110443257	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110443436_110444793_110445058_110450469
ENSMUSG00000113601.2_0	chr13	-	1296	1	FSM	ENSMUSG00000113601.2	ENSMUST00000222614.2	1310	1	11	3	11	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATCTTAAAGAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	62830304	62829008	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62829000_62830300
ENSMUSG00000113625.2_0	chr12	-	697	1	FSM	ENSMUSG00000113625.2	ENSMUST00000222259.2	642	1	7	-62	7	62	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	109861520	109860823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_109860800_109861500
ENSMUSG00000113626.2_0	chr13	+	2225	3	FSM	ENSMUSG00000113626.2	ENSMUST00000222847.2	2239	3	0	14	0	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGAAAAAAAGCTACG	NA	NA	NA	NA	NA	NA	NA	NA	61952079	62009475	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_61952220_62005782_62005910_62007517
ENSMUSG00000113640.2_0	chr10	+	1398	2	FSM	ENSMUSG00000113640.2	ENSMUST00000038411.5	1411	2	6	7	6	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCAAGTTGCCGTTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	80438719	80443481	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80438784_80442147
ENSMUSG00000113642.2_0	chr12	+	542	2	Fusion	ENSMUSG00000113416.2_ENSMUSG00000113642.2	novel	1815	2	NA	NA	56	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCTATCGATTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	18074123	18112458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr12_+_18074176_18111968
ENSMUSG00000113642.2_1	chr12	+	477	1	ISM	ENSMUSG00000113642.2	ENSMUST00000221149.2	550	2	161247	7	14	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCATCTATCGATTGCTTG	NA	NA	NA	NA	NA	NA	NA	NA	18111981	18112458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_+_18112000_18112500
ENSMUSG00000113642.2_2	chr12	+	1275	3	FSM	ENSMUSG00000113642.2	ENSMUST00000222523.2	1295	3	4	16	4	-16	multi-exon	TRUE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGATCAAATAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	18112095	18115595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_18112440_18113722_18113829_18114770
ENSMUSG00000113662.2_0	chr12	-	2197	1	FSM	ENSMUSG00000113662.2	ENSMUST00000222675.2	2219	1	16	6	16	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTAAGGGCACCATCCT	NA	NA	NA	NA	NA	NA	NA	NA	110568381	110566184	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110566200_110568400
ENSMUSG00000113670.2_0	chr12	-	1356	3	FSM	ENSMUSG00000113670.2	ENSMUST00000222206.2	1400	3	34	10	34	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACCAAGGTCTGTGAG	NA	NA	NA	NA	NA	NA	NA	NA	23010273	23004005	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_23004839_23008352_23008459_23009856
ENSMUSG00000113673.2_0	chr13	+	3655	2	FSM	ENSMUSG00000113673.2	ENSMUST00000221075.2	3667	2	5	7	5	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCTAGAGACTATCCAT	NA	NA	NA	NA	NA	NA	NA	NA	11024463	11029974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_11024574_11026429
ENSMUSG00000113691.2_0	chr12	-	1713	3	FSM	ENSMUSG00000113691.2	ENSMUST00000221301.2	1740	3	19	8	19	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGTAATCAATGTGGG	NA	NA	NA	NA	NA	NA	NA	NA	23834113	23830865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_23832410_23833744_23833806_23834005
ENSMUSG00000113722.2_0	chr12	-	507	2	FSM	ENSMUSG00000113722.2	ENSMUST00000222812.2	527	2	18	2	18	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGTGTGTCTCGTCTAC	NA	NA	NA	NA	NA	NA	NA	NA	104998518	104996877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_104997085_104998218
ENSMUSG00000113752.2_0	chr12	-	3134	1	FSM	ENSMUSG00000113752.2	ENSMUST00000222887.2	3153	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCAACAAGTGCTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	85410400	85407266	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_85407300_85410400
ENSMUSG00000113796.2_0	chr13	-	1778	3	FSM	ENSMUSG00000113796.2	ENSMUST00000222903.2	1795	3	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAATGTTAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70830075	70824841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_70825226_70827411_70827494_70828763
ENSMUSG00000113836.2_0	chr13	+	2662	4	FSM	ENSMUSG00000113836.2	ENSMUST00000220871.2	2707	4	32	13	32	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAATCAATGAGATAAAG	NA	NA	NA	NA	NA	NA	NA	NA	62163450	62198787	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_62163867_62194994_62195122_62195306_62195368_62196729
ENSMUSG00000113841.2_0	chr13	-	2268	1	FSM	ENSMUSG00000113841.2	ENSMUST00000221260.2	2293	1	19	6	19	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTCATCTTCTAAGTGGT	NA	NA	NA	NA	NA	NA	NA	NA	62599404	62597136	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_62597100_62599400
ENSMUSG00000113849.2_0	chr12	-	3588	1	FSM	ENSMUSG00000113849.2	ENSMUST00000221302.2	3613	1	25	0	25	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTTCTAAAGCAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	98552210	98548622	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_98548600_98552200
ENSMUSG00000113864.2_0	chr12	-	3948	1	FSM	ENSMUSG00000113864.2	ENSMUST00000222952.2	3964	1	5	11	5	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGAATGCTGCTGGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	100410914	100406966	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_100407000_100410900
ENSMUSG00000113868.2_0	chr12	-	290	2	ISM	ENSMUSG00000113868.2	ENSMUST00000222231.2	382	3	7645	8	7645	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAAAGGGATTAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	110045212	110013127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr12_-_110013258_110045052
ENSMUSG00000113868.2_1	chr12	-	374	3	FSM	ENSMUSG00000113868.2	ENSMUST00000222231.2	382	3	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAAAGGGATTAAATGG	NA	NA	NA	NA	NA	NA	NA	NA	110052857	110013127	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110013258_110045052_110045218_110052778
ENSMUSG00000113902.2_0	chr12	-	838	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221422.2	861	3	10	13	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGAATTTAAAGTGTGAT	NA	NA	NA	NA	NA	NA	NA	NA	101942503	101934361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101934470_101935751_101935897_101941918
ENSMUSG00000113902.2_3	chr12	-	497	3	FSM	ENSMUSG00000113902.2	ENSMUST00000221191.2	511	3	6	8	6	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACTATTTAATTAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	101942180	101934376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_101934470_101935751_101935894_101941918
ENSMUSG00000113909.2_0	chr13	-	743	3	FSM	ENSMUSG00000113909.2	ENSMUST00000220833.2	757	3	9	5	9	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCACTCCTGTCCCCACCT	NA	NA	NA	NA	NA	NA	NA	NA	70803897	70799128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_70799684_70803138_70803186_70803756
ENSMUSG00000113921.2_0	chr13	-	798	1	FSM	ENSMUSG00000113921.2	ENSMUST00000223015.2	841	1	31	12	31	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGATAATAACAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	50288515	50287717	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_50287700_50288500
ENSMUSG00000113924.2_0	chr13	-	3839	1	FSM	ENSMUSG00000113924.2	ENSMUST00000222978.2	3841	1	0	2	0	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTAGCCCAAAACCTAGG	NA	NA	NA	NA	NA	NA	NA	NA	16564344	16560505	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_16560500_16564300
ENSMUSG00000113948.2_0	chr12	+	543	1	FSM	ENSMUSG00000113948.2	ENSMUST00000221295.2	556	1	7	6	7	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATTCAGCATAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	67557536	67558079	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_67557500_67558100
ENSMUSG00000113949.2_0	chr10	+	1802	7	FSM	ENSMUSG00000113949.2	ENSMUST00000079883.12	1804	7	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	2205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80438715	80451617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80438784_80444636_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113949.2_3	chr10	+	1738	6	FSM	ENSMUSG00000035370.10	ENSMUST00000178231.2	4516	6	2778	0	2778	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	793	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGGCCTTTATCTGTGG	NA	NA	NA	NA	NA	NA	NA	NA	80444632	80451617	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_80444685_80445163_80445293_80445474_80445632_80446861_80446964_80448175_80448294_80450437
ENSMUSG00000113959.2_0	chr12	+	3508	1	FSM	ENSMUSG00000113959.2	ENSMUST00000222720.2	3539	1	28	3	28	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAAAAGGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	19351681	19355189	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_19351700_19355200
ENSMUSG00000114004.2_0	chr10	+	827	3	FSM	ENSMUSG00000114004.2	ENSMUST00000125635.2	831	3	1	3	1	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACAGATCTGGGCTTCTG	NA	NA	NA	NA	NA	NA	NA	NA	81224839	81227098	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr10_+_81224965_81226192_81226419_81226622
ENSMUSG00000114018.2_0	chr12	-	678	3	FSM	ENSMUSG00000114018.2	ENSMUST00000221201.2	684	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCTGCCCATGGTGGCT	NA	NA	NA	NA	NA	NA	NA	NA	16900882	16894887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_16895183_16898334_16898365_16900529
ENSMUSG00000114053.2_0	chr13	-	379	5	FSM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAAGGTAAGTGTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	5774441	5673391	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_5673414_5688843_5688951_5752478_5752592_5753416_5753510_5774397
ENSMUSG00000114053.2_1	chr13	-	328	4	ISM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	20943	2	20943	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTAAGTGTTAAAATCC	NA	NA	NA	NA	NA	NA	NA	NA	5753498	5673387	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_5673414_5688843_5688951_5752478_5752592_5753416
ENSMUSG00000114053.2_2	chr13	-	354	4	ISM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	3	15458	3	-15458	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGCTGAGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	5774438	5688843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_5688951_5752478_5752592_5753416_5753510_5774397
ENSMUSG00000114053.2_3	chr13	-	291	3	ISM	ENSMUSG00000114053.2	ENSMUST00000223254.2	385	5	20954	15458	20954	-15458	internal_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGGCTGAGTGGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	5753487	5688843	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_-_5688951_5752478_5752592_5753416
ENSMUSG00000114104.2_0	chr13	+	2310	1	FSM	ENSMUSG00000114104.2	ENSMUST00000220661.2	2312	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGGAGAAAAAAAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	63421415	63423725	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_63421400_63423700
ENSMUSG00000114133.2_0	chr13	-	2116	1	FSM	ENSMUSG00000114133.2	ENSMUST00000220449.2	2161	1	13	32	13	-32	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAACAGTACAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	96217871	96215755	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_96215800_96217900
ENSMUSG00000114139.2_0	chr12	-	1243	3	FSM	ENSMUSG00000114139.2	ENSMUST00000222057.2	1283	3	31	9	31	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGATCAAATAAACCAA	NA	NA	NA	NA	NA	NA	NA	NA	22883331	22879742	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_22880568_22881484_22881591_22883019
ENSMUSG00000114165.2_0	chr13	+	1980	1	FSM	ENSMUSG00000114165.2	ENSMUST00000221450.2	2016	1	27	9	27	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACCTAGCAAGATACCGAA	NA	NA	NA	NA	NA	NA	NA	NA	64300421	64302401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_64300400_64302400
ENSMUSG00000114172.2_0	chr13	-	1711	3	NNC	ENSMUSG00000114172.2	novel	1732	3	NA	NA	17	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTATGAATGTAATGA	NA	NA	NA	NA	NA	NA	NA	NA	62791049	62787708	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr13_-_62789246_62790689_62790751_62790936
ENSMUSG00000114274.2_0	chr13	-	705	4	FSM	ENSMUSG00000114274.2	ENSMUST00000225539.2	737	4	29	3	29	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAGTGGTAGAGCTGAAT	NA	NA	NA	NA	NA	NA	NA	NA	60582516	60570572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_60570880_60571789_60571861_60574371_60574543_60582360
ENSMUSG00000114372.2_0	chr13	+	1009	4	FSM	ENSMUSG00000114372.2	ENSMUST00000225970.2	1032	4	5	18	5	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGATACAAAAAATAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	83213580	83342448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_83214068_83214346_83214382_83243923_83243973_83342010
ENSMUSG00000114378.2_0	chr14	-	3097	7	FSM	ENSMUSG00000114378.2	ENSMUST00000225871.2	3124	7	25	2	25	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTATCTTCTTAAAACTT	NA	NA	NA	NA	NA	NA	NA	NA	10185762	10145310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_10147633_10162545_10162640_10168516_10168616_10172106_10172182_10173015_10173142_10182369_10182494_10185505
ENSMUSG00000114442.2_0	chr13	+	4252	2	FSM	ENSMUSG00000114442.2	ENSMUST00000224844.2	4257	2	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTAGCTGCTGGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	67426640	67431420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_67426670_67427197
ENSMUSG00000114442.2_1	chr13	+	4189	1	ISM	ENSMUSG00000114442.2	ENSMUST00000224844.2	4257	2	591	5	572	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTAGCTGCTGGTATTC	NA	NA	NA	NA	NA	NA	NA	NA	67427231	67431420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr13_+_67427200_67431400
ENSMUSG00000114551.2_0	chr13	-	1209	1	FSM	ENSMUSG00000114551.2	ENSMUST00000225901.2	1217	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTTGATTCCAGGAC	NA	NA	NA	NA	NA	NA	NA	NA	115666308	115665099	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_115665100_115666300
ENSMUSG00000114598.2_0	chr13	-	2770	1	FSM	ENSMUSG00000114598.2	ENSMUST00000223763.2	2800	1	24	6	24	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACCAAAAGAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	98937894	98935124	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_98935100_98937900
ENSMUSG00000114627.2_0	chr13	+	2349	1	NIC	ENSMUSG00000114627.2	novel	2511	2	NA	NA	3209	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCACACAAAGAAACTTTG	NA	NA	NA	NA	NA	NA	NA	NA	108138843	108141192	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr13_+_108138800_108141200
ENSMUSG00000114638.2_0	chr13	+	3464	2	FSM	ENSMUSG00000114638.2	ENSMUST00000224471.2	3470	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTCTCTGTGTGTCTGTG	NA	NA	NA	NA	NA	NA	NA	NA	38711378	38716890	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_38712235_38714282
ENSMUSG00000114662.2_0	chr13	-	863	2	FSM	ENSMUSG00000114662.2	ENSMUST00000224935.2	887	2	21	3	21	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTGATCGAACCGGCTT	NA	NA	NA	NA	NA	NA	NA	NA	41071350	41060810	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_41061214_41070890
ENSMUSG00000114724.2_0	chr13	-	571	2	FSM	ENSMUSG00000114724.2	ENSMUST00000224689.2	571	2	0	0	0	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGATGTTTGGGGTAT	NA	NA	NA	NA	NA	NA	NA	NA	37748948	37745920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_37746408_37748864
ENSMUSG00000114736.2_0	chr13	-	352	3	FSM	ENSMUSG00000114736.2	ENSMUST00000223952.2	356	3	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTCCAGAAGTTAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	119416081	119408158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_119408237_119415138_119415302_119415970
ENSMUSG00000114790.2_0	chr13	-	2557	7	FSM	ENSMUSG00000114790.2	ENSMUST00000223835.2	2567	7	10	0	10	0	multi-exon	TRUE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTCATGTTTCTGAGTTC	NA	NA	NA	NA	NA	NA	NA	NA	113639370	113582823	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_113583328_113587401_113587752_113601057_113601547_113602275_113603056_113621053_113621192_113622292_113622460_113639241
ENSMUSG00000114797.2_0	chr14	-	2473	15	FSM	ENSMUSG00000114797.2	ENSMUST00000225311.2	2475	15	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTAGCCTTCAGTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60488926	60442730	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_60443402_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUSG00000114797.2_4	chr14	-	3902	15	FSM	ENSMUSG00000114797.2	ENSMUST00000041905.8	3913	15	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTGTAGGTCTCAGCA	NA	NA	NA	NA	NA	NA	NA	NA	60488945	60455526	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_60457608_60459031_60459128_60460765_60460865_60466157_60466360_60469522_60469606_60469995_60470115_60471678_60471759_60475900_60476076_60476929_60476996_60478222_60478248_60479995_60480107_60480805_60480944_60481962_60482113_60484772_60484916_60488611
ENSMUSG00000114836.2_0	chr13	-	1912	1	FSM	ENSMUSG00000114836.2	ENSMUST00000223708.2	1924	1	0	12	0	-12	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAGAAGGAAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	81235433	81233521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_81233500_81235400
ENSMUSG00000114942.2_0	chr14	-	3261	9	FSM	ENSMUSG00000114942.2	ENSMUST00000174694.8	3287	9	14	12	14	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAACTAGAAGAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	57983546	57879545	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_57879618_57880538_57880681_57885875_57885982_57933576_57933760_57934372_57934956_57936714_57938016_57940378_57940512_57971334_57971876_57983346
ENSMUSG00000114943.2_0	chr1	+	1665	1	FSM	ENSMUSG00000114943.2	ENSMUST00000224330.2	1679	1	12	2	12	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAATTAAGTCA	NA	NA	NA	NA	NA	NA	NA	NA	151068138	151069803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_151068100_151069800
ENSMUSG00000114958.2_0	chr13	-	651	4	FSM	ENSMUSG00000114958.2	ENSMUST00000224746.2	656	4	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGAGCGTCGTGCTCGGG	NA	NA	NA	NA	NA	NA	NA	NA	47494413	47488729	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_47488818_47488928_47489024_47492239_47492498_47494203
ENSMUSG00000114970.2_0	chr14	-	3998	1	FSM	ENSMUSG00000114970.2	ENSMUST00000228608.2	4011	1	5	8	5	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGGAAGAAAGAAAGAAAG	NA	NA	NA	NA	NA	NA	NA	NA	124849899	124845901	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_124845900_124849900
ENSMUSG00000115022.2_0	chr14	-	1015	8	FSM	ENSMUSG00000021884.19	ENST00000435217.6	1027	8	9	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGTTCCGTTGCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	31362862	31332060	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_31332246_31336160_31336269_31337319_31337479_31338316_31338472_31340928_31341031_31341801_31341886_31362450_31362556_31362745
ENSMUSG00000115049.2_0	chr15	-	901	6	NNC	ENSMUSG00000115049.2	novel	935	6	NA	NA	26	-9	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCTAATTCTCTTTAAAG	NA	NA	NA	NA	NA	NA	NA	NA	95891984	95870628	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_-_95870743_95872873_95873182_95875251_95875409_95875799_95875987_95883866_95883913_95891895
ENSMUSG00000115050.2_0	chr14	+	1206	3	FSM	ENSMUSG00000115050.2	ENSMUST00000228384.2	1232	3	18	8	18	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAAACTTTGAAGTGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	43883725	43910514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_43883838_43888015_43888461_43909865
ENSMUSG00000115074.2_0	chr2	-	2036	1	FSM	ENSMUSG00000115018.3	ENSMUST00000228627.3	2045	1	5	4	5	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATCATTACCTCTGCCAT	NA	NA	NA	NA	NA	NA	NA	NA	25136870	25134834	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_25134800_25136900
ENSMUSG00000115090.2_0	chr14	-	612	2	FSM	ENSMUSG00000115090.2	ENSMUST00000228931.2	614	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTGCAAATGTAATTT	NA	NA	NA	NA	NA	NA	NA	NA	79184665	79182619	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_79183145_79184578
ENSMUSG00000115144.2_0	chr15	+	2317	1	FSM	ENSMUSG00000115144.2	ENSMUST00000228376.2	2325	1	0	8	0	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGTCACCAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	35589459	35591776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_35589500_35591800
ENSMUSG00000115193.2_0	chr15	+	596	1	FSM	ENSMUSG00000115193.2	ENSMUST00000227365.2	608	1	11	1	11	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACTCCAATAAATACTGT	NA	NA	NA	NA	NA	NA	NA	NA	23489987	23490583	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_23490000_23490600
ENSMUSG00000115200.2_0	chr15	+	3201	4	FSM	ENSMUSG00000115200.2	ENSMUST00000227739.2	3245	4	25	19	25	-19	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATGAAATGAGAAAAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	55786822	55824283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_55786917_55804006_55804101_55809119_55809253_55821403
ENSMUSG00000115219.3_0	chr16	+	1123	3	FSM	ENSMUSG00000115219.3	ENSMUST00000115522.10	1134	3	7	4	-1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGACTGCTTTATGCT	NA	NA	NA	NA	NA	NA	NA	NA	20430349	20437757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20430571_20436375_20436660_20437139
ENSMUSG00000115220.2_0	chr14	-	667	2	FSM	ENSMUSG00000115220.2	ENSMUST00000227218.2	673	2	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCGCGAGCATCAGACTCTC	NA	NA	NA	NA	NA	NA	NA	NA	119221166	119220405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_119220833_119220926
ENSMUSG00000115275.2_0	chr14	-	7432	1	FSM	ENSMUSG00000115275.2	ENSMUST00000228572.2	7441	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTGAAAACAAAAAGAACT	NA	NA	NA	NA	NA	NA	NA	NA	45729538	45722106	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_45722100_45729500
ENSMUSG00000115293.3_18	chr16	+	2907	18	ISM	ENSMUSG00000022842.19	ENST00000404464.8	2979	19	368	10	368	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAGATCTATATCAG	NA	NA	NA	NA	NA	NA	NA	NA	20449108	20464647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000115293.3_19	chr16	+	2426	18	ISM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	370	0	370	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGTTAGGAGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20449110	20464032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000115293.3_2	chr16	+	2969	19	FSM	ENSMUSG00000022842.19	ENST00000404464.8	2979	19	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAATAGATCTATATCAG	NA	NA	NA	NA	NA	NA	NA	NA	20448740	20464647	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20448796_20449101_20449189_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000115293.3_4	chr16	+	2489	19	FSM	ENSMUSG00000022842.19	ENST00000357474.9	2490	19	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAGTTAGGAGAGAGTG	NA	NA	NA	NA	NA	NA	NA	NA	20448741	20464032	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_20448796_20449101_20449325_20449530_20449661_20449846_20450063_20451281_20451407_20451497_20451645_20451799_20451866_20456410_20456600_20457409_20457553_20457921_20458037_20459364_20459476_20461024_20461124_20461222_20461301_20462095_20462200_20462372_20462484_20462602_20462671_20462817_20463009_20463090_20463187_20463809
ENSMUSG00000115317.2_0	chr15	+	1324	4	FSM	ENSMUSG00000115317.2	ENSMUST00000147013.3	1334	4	7	3	7	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	448	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCTGTGTGTCAGTGTC	NA	NA	NA	NA	NA	NA	NA	NA	32779056	32796149	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_32779331_32779456_32779577_32793709_32793757_32795266
ENSMUSG00000115324.2_0	chr14	+	694	5	FSM	ENSMUSG00000115324.2	ENSMUST00000228591.2	721	5	3	24	3	-24	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAATCTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45767817	45782320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45767989_45770629_45770763_45781054_45781247_45781731_45781815_45782205
ENSMUSG00000115324.2_1	chr14	+	578	4	ISM	ENSMUSG00000115324.2	ENSMUST00000228591.2	721	5	5	529	5	-529	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGGGTAGGGGAGAGGGG	NA	NA	NA	NA	NA	NA	NA	NA	45767819	45781815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_45767989_45770629_45770763_45781054_45781247_45781731
ENSMUSG00000115326.2_0	chr15	-	2248	6	FSM	ENSMUSG00000115326.2	ENSMUST00000226812.2	2265	6	9	8	9	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAGGAGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	37899951	37893246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_37893329_37893486_37894139_37895034_37895417_37896953_37897999_37899430_37899443_37899876
ENSMUSG00000115326.2_1	chr15	-	2163	4	ISM	ENSMUSG00000115326.2	ENSMUST00000226812.2	2265	6	1960	8	1960	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAGGAGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	37898000	37893246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_37893329_37893486_37894139_37895034_37895417_37896953
ENSMUSG00000115326.2_3	chr15	-	2213	5	NIC	ENSMUSG00000115326.2	novel	2265	6	NA	NA	32	-8	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAGGAGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	37899928	37893246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_37893329_37893486_37894139_37895034_37895417_37896953_37897999_37899876
ENSMUSG00000115326.2_4	chr15	-	2236	5	NNC	ENSMUSG00000115326.2	novel	2265	6	NA	NA	14	-8	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAACAAGGAGAAGATGT	NA	NA	NA	NA	NA	NA	NA	NA	37899946	37893246	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr15_-_37893329_37893486_37894139_37895034_37895417_37896953_37897999_37899871
ENSMUSG00000115338.3_0	chr14	+	2929	6	FSM	ENSMUSG00000115338.3	ENSMUST00000048615.13	2942	6	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	610	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTGAAACCATGAAGGAT	NA	NA	NA	NA	NA	NA	NA	NA	51181767	51190865	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_51182051_51185308_51185479_51187714_51187819_51187999_51188176_51188288_51188480_51188860
ENSMUSG00000115373.2_0	chr14	+	1468	1	FSM	ENSMUSG00000115373.2	ENSMUST00000227166.2	1474	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCGTTCTGAGCATCTT	NA	NA	NA	NA	NA	NA	NA	NA	45510706	45512174	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_45510700_45512200
ENSMUSG00000115381.2_0	chr15	-	2864	1	FSM	ENSMUSG00000115381.2	ENSMUST00000227799.2	2906	1	23	19	23	-19	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAGAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	26746200	26743336	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_26743300_26746200
ENSMUSG00000115410.2_0	chr14	-	1330	1	FSM	ENSMUSG00000115410.2	ENSMUST00000228355.2	1367	1	33	4	33	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCAAAGCTCGGCGCGGCT	NA	NA	NA	NA	NA	NA	NA	NA	47122488	47121158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_47121200_47122500
ENSMUSG00000115423.3_0	chr2	-	926	3	FSM	ENSMUSG00000115423.3	ENSMUST00000227806.2	944	3	7	11	7	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAACAAACTAAAGCTG	NA	NA	NA	NA	NA	NA	NA	NA	136733302	136723201	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_-_136723560_136727392_136727621_136732962
ENSMUSG00000115426.2_0	chr15	-	1826	4	FSM	ENSMUSG00000115426.2	ENSMUST00000228865.2	1861	4	35	0	35	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTCCATGGGCTGTCAC	NA	NA	NA	NA	NA	NA	NA	NA	59666773	59660265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_59661097_59661227_59661536_59662741_59663151_59666495
ENSMUSG00000115437.2_0	chr15	-	1034	1	FSM	ENSMUSG00000115437.2	ENSMUST00000228508.2	1042	1	2	6	2	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAAAGCTCTTCTTCT	NA	NA	NA	NA	NA	NA	NA	NA	38276683	38275649	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38275600_38276700
ENSMUSG00000115457.2_0	chr15	+	621	1	FSM	ENSMUSG00000115457.2	ENSMUST00000227885.2	646	1	17	8	17	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCTGAAGGCTTCAATAG	NA	NA	NA	NA	NA	NA	NA	NA	51952720	51953341	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_51952700_51953300
ENSMUSG00000115483.2_0	chr14	+	1459	4	FSM	ENSMUSG00000115483.2	ENSMUST00000228117.2	1466	4	0	7	0	-7	multi-exon	TRUE	canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATTCTAAAAGAATTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	43156328	43163454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_43156357_43157302_43157435_43158114_43158297_43162337
ENSMUSG00000115483.2_1	chr14	+	1411	3	ISM	ENSMUSG00000115483.2	ENSMUST00000228117.2	1466	4	988	13	988	-13	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACATATTCTAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	43157316	43163448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_43157435_43158114_43158297_43162337
ENSMUSG00000115505.2_0	chr14	-	979	1	FSM	ENSMUSG00000115505.2	ENSMUST00000228021.2	999	1	12	8	12	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCTAAAGTCTTCCCAGT	NA	NA	NA	NA	NA	NA	NA	NA	93433120	93432141	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_93432100_93433100
ENSMUSG00000115568.2_0	chr15	+	1892	1	FSM	ENSMUSG00000115568.2	ENSMUST00000227393.2	1897	1	0	5	0	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCTATGCGTGCTAATTG	NA	NA	NA	NA	NA	NA	NA	NA	27479091	27480983	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_27479100_27481000
ENSMUSG00000115570.2_0	chr14	+	1186	1	FSM	ENSMUSG00000115570.2	ENSMUST00000228735.2	1216	1	23	7	23	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGCAAGCTGAGAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47729047	47730233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_47729000_47730200
ENSMUSG00000115596.2_0	chr14	+	592	2	FSM	ENSMUSG00000115596.2	ENSMUST00000227341.2	603	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGCTGGAGAGTGCTA	NA	NA	NA	NA	NA	NA	NA	NA	77099021	77112615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_77099133_77112134
ENSMUSG00000115620.2_0	chr15	-	2750	3	FSM	ENSMUSG00000115620.2	ENSMUST00000226763.2	2766	3	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAATCAGATATGCCCAC	NA	NA	NA	NA	NA	NA	NA	NA	38728752	38713734	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_38715451_38718352_38718860_38728225
ENSMUSG00000115665.2_0	chr14	-	1882	5	FSM	ENSMUSG00000115665.2	ENSMUST00000226569.2	1926	5	23	21	23	-21	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAGTAAAATAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	46874857	46840283	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_46841775_46842643_46842701_46863702_46863762_46871480_46871653_46874754
ENSMUSG00000115669.2_0	chr14	+	696	2	FSM	ENSMUSG00000115669.2	ENSMUST00000228502.2	704	2	4	4	4	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTTGTTACACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48880921	48887227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_48880976_48886585
ENSMUSG00000115669.2_1	chr14	+	639	1	ISM	ENSMUSG00000115669.2	ENSMUST00000228502.2	704	2	5671	4	5671	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAATTTGTTACACCCCAG	NA	NA	NA	NA	NA	NA	NA	NA	48886588	48887227	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_+_48886600_48887200
ENSMUSG00000115678.2_0	chr15	-	249	3	FSM	ENSMUSG00000115678.2	ENSMUST00000228202.2	259	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTACATAAACTCAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	55913228	55909957	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_55909995_55911667_55911779_55913127
ENSMUSG00000115678.2_1	chr15	-	154	2	ISM	ENSMUSG00000115678.2	ENSMUST00000228202.2	259	3	1449	5	1449	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATAAACTCAAGGATAACG	NA	NA	NA	NA	NA	NA	NA	NA	55911779	55909952	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_55909995_55911667
ENSMUSG00000115767.2_0	chr14	-	1683	1	FSM	ENSMUSG00000115767.2	ENSMUST00000226346.2	1701	1	9	9	9	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTGCAACTTGTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	54702190	54700507	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_54700500_54702200
ENSMUSG00000115778.2_0	chr14	-	4798	1	ISM	ENSMUSG00000115778.2	ENSMUST00000228843.2	4874	2	8770	4	8770	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTTTTTCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55771086	55766288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr14_-_55766300_55771100
ENSMUSG00000115778.2_1	chr14	-	4867	2	FSM	ENSMUSG00000115778.2	ENSMUST00000228843.2	4874	2	3	4	3	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATTTTTTTCCATTTTT	NA	NA	NA	NA	NA	NA	NA	NA	55779853	55766288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_55771106_55779803
ENSMUSG00000115801.2_0	chr14	-	93131	1	FSM	ENSMUSG00000115801.2	ENSMUST00000226445.2	93147	1	13	3	13	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	2124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGAATTCCTGATCTTTCC	NA	NA	NA	NA	NA	NA	NA	NA	44874645	44781514	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_44781500_44874600
ENSMUSG00000115816.2_0	chr14	-	2911	7	FSM	ENSMUSG00000115816.2	ENSMUST00000227348.2	2927	7	6	10	6	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAGTCCACAGAATTCA	NA	NA	NA	NA	NA	NA	NA	NA	103072188	103055609	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_-_103056820_103059821_103059864_103060453_103060828_103063219_103063421_103065517_103065707_103070301_103070391_103071382
ENSMUSG00000115817.2_0	chr14	+	2978	2	FSM	ENSMUSG00000115817.2	ENSMUST00000226490.2	3000	2	16	6	16	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTTCAATAAAAGAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	77018282	77021646	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_77018362_77018747
ENSMUSG00000115852.3_0	chr16	-	2754	4	FSM	ENSMUSG00000115852.3	ENSMUST00000230383.2	2760	4	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACGTTAACCATCACCCAAC	NA	NA	NA	NA	NA	NA	NA	NA	24108586	23941454	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_23943779_23967280_23967449_24104974_24105131_24108480
ENSMUSG00000115852.3_1	chr16	-	2654	3	ISM	ENSMUSG00000115852.3	ENSMUST00000230383.2	2760	4	3456	0	3456	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCATCACCCAACAAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	24105130	23941448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_23943779_23967280_23967449_24104974
ENSMUSG00000115925.2_0	chr15	+	1552	4	FSM	ENSMUSG00000115925.2	ENSMUST00000231019.2	1578	4	8	18	8	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAACTAAACATAACAG	NA	NA	NA	NA	NA	NA	NA	NA	84011512	84020442	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_84011755_84013870_84013967_84015749_84015869_84019347
ENSMUSG00000115936.2_0	chr16	+	1150	3	FSM	ENSMUSG00000115936.2	ENSMUST00000229695.2	1168	3	13	5	13	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTATTTTGCGTGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	11596305	11599359	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_11596398_11597501_11597712_11598511
ENSMUSG00000115938.2_0	chr15	-	243	1	FSM	ENSMUSG00000115938.2	ENSMUST00000230504.2	252	1	62	-53	62	53	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ATATTAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	99604632	99604389	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_99604400_99604600
ENSMUSG00000115971.2_0	chr15	+	2550	2	FSM	ENSMUSG00000115971.2	ENSMUST00000230701.2	2556	2	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTCTCCAGGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	79727363	79730958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_79727458_79728502
ENSMUSG00000115971.2_1	chr15	+	2454	1	ISM	ENSMUSG00000115971.2	ENSMUST00000230701.2	2556	2	1141	6	1141	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTCTCCAGGCCATGT	NA	NA	NA	NA	NA	NA	NA	NA	79728504	79730958	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_79728500_79731000
ENSMUSG00000115976.2_0	chr15	-	528	2	FSM	ENSMUSG00000115976.2	ENSMUST00000230118.2	544	2	8	8	8	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCTGTTCTGTACCGT	NA	NA	NA	NA	NA	NA	NA	NA	80890603	80889615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_80889892_80890351
ENSMUSG00000115980.2_0	chr15	-	256	1	FSM	ENSMUSG00000115980.2	ENSMUST00000230986.2	285	1	26	3	26	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTCTGCCCGGCGGCCA	NA	NA	NA	NA	NA	NA	NA	NA	98770468	98770212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98770200_98770500
ENSMUSG00000115987.2_0	chr15	-	898	10	FSM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	6	7	6	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCCTGCTGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76510268	76506315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333_76509406_76510188
ENSMUSG00000115987.2_1	chr15	-	822	9	ISM	ENSMUSG00000115987.2	ENSMUST00000078803.5	911	10	865	7	-587	-7	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTCCTGCTGTGGGCAG	NA	NA	NA	NA	NA	NA	NA	NA	76509409	76506315	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76506551_76506670_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791_76508821_76509333
ENSMUSG00000115987.2_12	chr15	-	716	6	ISM	ENSMUSG00000115987.2	ENST00000377348.6	754	7	139	5	139	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTCACCGAGACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76508683	76506434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647
ENSMUSG00000115987.2_13	chr15	-	749	7	FSM	ENSMUSG00000115987.2	ENST00000377348.6	754	7	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTCACCGAGACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76508822	76506434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285_76508376_76508647_76508686_76508791
ENSMUSG00000115987.2_14	chr15	-	674	5	ISM	ENSMUSG00000115987.2	ENST00000377348.6	754	7	453	5	453	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTCACCGAGACAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	76508369	76506434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_76506763_76506854_76506909_76507370_76507473_76507588_76507695_76508285
ENSMUSG00000115988.2_0	chr15	+	1092	2	FSM	ENSMUSG00000115988.2	ENSMUST00000230284.2	1108	2	10	6	10	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTTAAATATAAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	42060189	42064692	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_42060411_42063821
ENSMUSG00000116004.2_0	chr15	+	500	2	FSM	ENSMUSG00000116004.2	ENSMUST00000230234.2	511	2	6	5	6	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCGAAAGTGGATCCCCG	NA	NA	NA	NA	NA	NA	NA	NA	85530289	85551871	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85530497_85551578
ENSMUSG00000116024.2_0	chr15	+	2748	5	FSM	ENSMUSG00000033669.9	ENSMUST00000023179.7	2772	5	16	8	16	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAAAGGTGTAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76763474	76776587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76763554_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUSG00000116024.2_2	chr15	+	2942	5	FSM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	16	2	-10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAAAGGTGTAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76763524	76776587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76763798_76764938_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUSG00000116024.2_3	chr15	+	2671	4	ISM	ENSMUSG00000033669.9	ENSMUST00000230106.2	2960	5	1428	2	1402	-2	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTAAAGGTGTAGCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	76764936	76776587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_76764983_76765311_76765439_76772430_76772548_76774206
ENSMUSG00000116048.2_0	chr1	+	3765	13	FSM	ENSMUSG00000026276.21	ENSMUST00000027495.15	3779	13	8	6	8	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2427	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATGCTCAGATTTTTACG	NA	NA	NA	NA	NA	NA	NA	NA	93406693	93437976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93406791_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_16	chr1	+	3178	12	FSM	ENSMUSG00000116048.2	ENSMUST00000172165.8	3192	12	4	10	4	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTAAATGAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93406718	93437445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93406791_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_30	chr1	+	3246	13	FSM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	11	10	11	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	2138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTAAATGAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93406793	93437445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93406903_93416845_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_43	chr1	+	3134	12	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	10066	10	10066	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTAAATGAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93416848	93437445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_50	chr1	+	3107	11	ISM	ENSMUSG00000116048.2	ENSMUST00000168776.8	3267	13	12095	10	12095	-10	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTAAATGAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93418877	93437445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr1_+_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116048.2_7	chr1	+	3207	13	FSM	ENSMUSG00000116048.2	ENSMUST00000179353.8	3219	13	2	10	2	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	1727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATATTAAATGAGTAGTCC	NA	NA	NA	NA	NA	NA	NA	NA	93406716	93437445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_+_93406791_93416849_93416877_93418878_93419000_93423300_93423388_93425062_93425187_93426733_93426869_93426994_93427113_93428179_93428282_93429228_93429375_93431156_93431241_93433265_93433324_93434684_93434805_93435434
ENSMUSG00000116068.2_0	chr15	+	1071	4	FSM	ENSMUSG00000116068.2	ENSMUST00000229807.2	1106	4	23	12	7	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACACCAAAACTCTGGCA	NA	NA	NA	NA	NA	NA	NA	NA	72033217	72159151	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_72033606_72044007_72044140_72091726_72091872_72158745
ENSMUSG00000116093.2_0	chr15	-	1538	1	FSM	ENSMUSG00000116093.2	ENSMUST00000230077.2	1240	1	3	-301	3	301	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATTCACGTGTTCAGAA	NA	NA	NA	NA	NA	NA	NA	NA	91925476	91923938	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_91923900_91925500
ENSMUSG00000116114.2_0	chr15	+	2512	5	FSM	ENSMUSG00000116114.2	ENSMUST00000229584.2	2534	5	6	16	6	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAATAATAAATAAATAACA	NA	NA	NA	NA	NA	NA	NA	NA	101220774	101303699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_101221141_101256551_101256642_101262131_101262323_101301319_101301441_101301955
ENSMUSG00000116138.2_0	chr15	-	1738	3	FSM	ENSMUSG00000116138.2	ENSMUST00000036247.10	1754	3	15	1	15	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTATTGACTTTAAATG	NA	NA	NA	NA	NA	NA	NA	NA	76608025	76605665	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_76607184_76607370_76607420_76607854
ENSMUSG00000116145.2_0	chr15	+	1601	1	FSM	ENSMUSG00000116145.2	ENSMUST00000230081.2	1608	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTTGTAGATTGATTAT	NA	NA	NA	NA	NA	NA	NA	NA	76474326	76475927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76474300_76475900
ENSMUSG00000116165.2_0	chr15	+	1984	2	FSM	ENSMUSG00000116165.2	ENSMUST00000089378.5	2001	2	10	7	10	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTCTCTTTGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	78798128	78803710	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78798732_78802329
ENSMUSG00000116237.2_0	chr15	+	2533	3	FSM	ENSMUSG00000116237.2	ENSMUST00000231054.2	2538	3	1	4	1	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGCCAAAAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	93632294	93636367	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_93633860_93634491_93634540_93635447
ENSMUSG00000116238.2_0	chr15	+	3027	1	FSM	ENSMUSG00000116238.2	ENSMUST00000230810.2	3039	1	1	11	1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAGAAGGGAAAATAGGG	NA	NA	NA	NA	NA	NA	NA	NA	76462025	76465052	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_76462000_76465100
ENSMUSG00000116295.2_0	chr15	-	581	4	FSM	ENSMUSG00000116295.2	ENSMUST00000229245.2	593	4	0	12	0	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	97065123	97054921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_97055131_97059094_97059277_97064383_97064508_97065057
ENSMUSG00000116295.2_1	chr15	-	496	3	ISM	ENSMUSG00000116295.2	ENSMUST00000229245.2	593	4	635	12	635	-12	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACATATAATAAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	97064488	97054921	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_-_97055131_97059094_97059277_97064383
ENSMUSG00000116305.2_0	chr15	+	1405	7	FSM	ENSMUSG00000116305.2	ENSMUST00000230913.2	1411	7	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTACAACTGGTCTTTGG	NA	NA	NA	NA	NA	NA	NA	NA	85537816	85591719	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85537861_85567436_85567516_85577737_85577820_85579115_85579182_85585107_85585222_85588436_85588492_85590754
ENSMUSG00000116305.2_1	chr15	+	1355	6	ISM	ENSMUSG00000116305.2	ENSMUST00000230913.2	1411	7	29623	9	-23351	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTTACAACTGGTCTT	NA	NA	NA	NA	NA	NA	NA	NA	85567439	85591716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr15_+_85567516_85577737_85577820_85579115_85579182_85585107_85585222_85588436_85588492_85590754
ENSMUSG00000116305.2_3	chr15	+	160	2	FSM	ENSMUSG00000116305.2	ENST00000360737.4	168	2	0	8	0	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACACAGCTACATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85590790	85591611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85590816_85591476
ENSMUSG00000116305.2_4	chr15	+	128	1	FSM	ENSMUSG00000065564.3	ENSMUST00000083630.3	85	1	-36	-7	-36	7	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACACAGCTACATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85591483	85591611	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_85591500_85591600
ENSMUSG00000116307.2_0	chr15	+	463	2	FSM	ENSMUSG00000116307.2	ENSMUST00000230340.2	475	2	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGAAAGAGGACATTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	78415318	78416995	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_78415610_78416823
ENSMUSG00000116358.2_0	chr15	-	876	4	FSM	ENSMUSG00000116358.2	ENSMUST00000134214.3	899	4	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCCCTCTGGCCACTTAT	NA	NA	NA	NA	NA	NA	NA	NA	98851414	98830022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_98830444_98849068_98849218_98849349_98849573_98851331
ENSMUSG00000116389.2_0	chr16	+	989	2	FSM	ENSMUSG00000116389.2	ENSMUST00000230278.2	1000	2	0	11	0	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAATTTAAAAAAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	3164775	3166785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_3165542_3166562
ENSMUSG00000116461.2_0	chr15	-	4274	27	FSM	ENSMUSG00000116461.2	ENSMUST00000052315.13	4296	27	14	8	14	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCTTTTCCTGCTCCAT	NA	NA	NA	NA	NA	NA	NA	NA	89313885	89300615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_-_89301183_89301347_89301441_89302034_89302149_89302934_89303088_89303178_89303314_89303393_89303559_89304094_89304212_89304290_89304397_89304894_89305081_89305547_89305744_89306491_89306600_89307694_89307773_89307858_89307997_89308142_89308245_89308467_89308646_89308919_89309060_89309390_89309551_89310690_89310865_89311013_89311096_89311526_89311631_89311763_89311873_89311994_89312077_89312159_89312219_89312336_89312433_89312613_89313031_89313251_89313361_89313579
ENSMUSG00000116508.2_0	chr15	+	2438	1	FSM	ENSMUSG00000116508.2	ENSMUST00000231106.2	2459	1	1	20	1	-20	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAATCTAAAAAAACG	NA	NA	NA	NA	NA	NA	NA	NA	83056551	83058989	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_83056600_83059000
ENSMUSG00000116561.2_0	chr16	+	120	1	FSM	ENSMUSG00000116561.2	ENSMUST00000231388.2	665	1	90	455	90	-455	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACCGTGAAAATCTGTAAT	NA	NA	NA	NA	NA	NA	NA	NA	17520880	17521000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_17520900_17521000
ENSMUSG00000116564.2_0	chr17	+	3202	10	FSM	ENSMUSG00000116564.2	ENSMUST00000024620.8	3220	10	12	6	12	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCATTTTTCTTGGCTTT	NA	NA	NA	NA	NA	NA	NA	NA	17594582	17615155	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17594933_17597980_17598120_17598744_17598862_17601073_17601250_17603547_17603637_17605145_17605338_17605842_17605936_17607325_17607836_17610229_17610327_17613716
ENSMUSG00000116582.2_0	chr16	-	1819	3	FSM	ENSMUSG00000116582.2	ENSMUST00000232154.2	1825	3	0	6	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCTTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	90473888	90464332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90465581_90470241_90470730_90473805
ENSMUSG00000116582.2_1	chr16	-	1738	2	ISM	ENSMUSG00000116582.2	ENSMUST00000232154.2	1825	3	3157	6	3157	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAGACTTGCTTTGGTCAT	NA	NA	NA	NA	NA	NA	NA	NA	90470731	90464332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_-_90465581_90470241
ENSMUSG00000116594.2_0	chr16	-	2163	11	FSM	ENSMUSG00000116594.2	ENSMUST00000231335.2	2206	11	43	0	43	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGGCGGTTTCTGTACCA	NA	NA	NA	NA	NA	NA	NA	NA	18445134	18439215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_18440083_18441664_18441768_18441854_18441991_18442070_18442168_18442860_18442963_18443096_18443215_18443332_18443468_18443558_18443683_18443918_18444006_18444094_18444192_18444837
ENSMUSG00000116597.2_0	chr16	+	4829	2	FSM	ENSMUSG00000116597.2	ENSMUST00000232340.2	4830	2	1	0	1	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACAGGGTTTCTCTATA	NA	NA	NA	NA	NA	NA	NA	NA	31436553	31444110	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31437176_31439903
ENSMUSG00000116627.2_0	chr12	+	1195	4	FSM	ENSMUSG00000116627.2	ENSMUST00000232257.2	1230	4	28	7	28	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACGTAATGTTGTCA	NA	NA	NA	NA	NA	NA	NA	NA	21040564	21090422	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_+_21040874_21062987_21063115_21063316_21063378_21089724
ENSMUSG00000116632.2_0	chr16	-	1438	1	FSM	ENSMUSG00000116632.2	ENSMUST00000231504.2	1455	1	12	5	12	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTAAATTTTGTGTTGCA	NA	NA	NA	NA	NA	NA	NA	NA	21152094	21150656	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_21150700_21152100
ENSMUSG00000116656.2_0	chr16	-	1213	2	FSM	ENSMUSG00000116656.2	ENSMUST00000231663.2	1236	2	18	5	18	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGGTGTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	90146512	90138487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_90139497_90146308
ENSMUSG00000116690.2_0	chr16	+	1383	2	FSM	ENSMUSG00000116690.2	ENSMUST00000231511.2	1391	2	1	7	1	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACGCGTGGGGAGGGGAT	NA	NA	NA	NA	NA	NA	NA	NA	31231285	31235302	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31231444_31234077
ENSMUSG00000116737.2_0	chr16	+	1321	3	FSM	ENSMUSG00000116737.2	ENSMUST00000231959.2	1324	3	3	0	3	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTCTTTGTTGTTGTTG	NA	NA	NA	NA	NA	NA	NA	NA	30689011	30700467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_30689859_30696688_30696786_30700090
ENSMUSG00000116802.2_0	chr17	+	2177	4	FSM	ENSMUSG00000116802.2	ENSMUST00000231355.2	2194	4	5	12	5	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGGAGAAAAACCGTATGA	NA	NA	NA	NA	NA	NA	NA	NA	17455138	17486313	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_17455288_17482739_17482867_17483108_17483170_17484473
ENSMUSG00000116835.2_0	chr16	-	587	1	FSM	ENSMUSG00000116835.2	ENSMUST00000231993.2	615	1	20	8	20	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCTAATACACGTGATAT	NA	NA	NA	NA	NA	NA	NA	NA	33827807	33827220	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_33827200_33827800
ENSMUSG00000116875.2_0	chr16	+	943	1	FSM	ENSMUSG00000116875.2	ENSMUST00000231737.2	969	1	17	9	17	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCCGTGTGAGGGCGTGC	NA	NA	NA	NA	NA	NA	NA	NA	24348160	24349103	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_24348200_24349100
ENSMUSG00000116877.2_0	chr16	+	2034	2	FSM	ENSMUSG00000116877.2	ENSMUST00000231497.2	2040	2	2	4	2	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACTAGTTAGACAGATGTA	NA	NA	NA	NA	NA	NA	NA	NA	57152315	57155791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_57152468_57153909
ENSMUSG00000116895.2_0	chr17	+	1673	12	FSM	ENSMUSG00000116895.2	ENSMUST00000097395.5	1684	12	4	7	4	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTAGTAGTGTAGGTGG	NA	NA	NA	NA	NA	NA	NA	NA	15230441	15242704	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15230534_15231134_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15239703_15239734_15240527_15240597_15242176
ENSMUSG00000116895.2_11	chr17	+	1002	4	ISM	ENSMUSG00000116895.2	ENST00000418781.7	1055	9	2	6063	2	-6063	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGTAACCAAGAGACTT	NA	NA	NA	NA	NA	NA	NA	NA	15231144	15234534	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933
ENSMUSG00000116895.2_13	chr17	+	1039	9	FSM	ENSMUSG00000116895.2	ENST00000418781.7	1055	9	12	4	12	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTAAAGCCCATGTATCC	NA	NA	NA	NA	NA	NA	NA	NA	15231154	15240593	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15231304_15231891_15232032_15233209_15233312_15233933_15234024_15236450_15236549_15237402_15237540_15238346_15238462_15239227_15239331_15240488
ENSMUSG00000116908.2_0	chr16	+	5085	1	FSM	ENSMUSG00000116908.2	ENSMUST00000135406.9	5095	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCACTTCTCATA	NA	NA	NA	NA	NA	NA	NA	NA	36695511	36700596	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_36695500_36700600
ENSMUSG00000116946.2_0	chr16	+	4596	3	FSM	ENSMUSG00000116946.2	ENSMUST00000232234.2	4608	3	7	5	7	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATATGCAGACAAGAGT	NA	NA	NA	NA	NA	NA	NA	NA	31054946	31067126	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_31055023_31059501_31060033_31063137
ENSMUSG00000116946.2_1	chr16	+	4524	2	ISM	ENSMUSG00000116946.2	ENSMUST00000232234.2	4608	3	4560	3	4560	-3	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGCAGACAAGAGTGG	NA	NA	NA	NA	NA	NA	NA	NA	31059499	31067128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_31060033_31063137
ENSMUSG00000116953.2_0	chr17	+	1823	12	FSM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	15	6	15	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTTTTTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	15198744	15211161	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_15199162_15199762_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15205079_15205178_15206035_15206173_15206979_15207095_15207857_15207961_15208335_15208366_15209159_15209229_15210808
ENSMUSG00000116953.2_11	chr17	+	1005	4	ISM	ENSMUSG00000116953.2	ENSMUST00000061688.11	1844	12	1041	8004	1041	-8004	internal_fragment	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGTAACCAAGAGACTTC	NA	NA	NA	NA	NA	NA	NA	NA	15199770	15203163	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_+_15199932_15200519_15200660_15201837_15201940_15202561
ENSMUSG00000116953.2_8	chr17	+	768	5	NNC	ENSMUSG00000116953.2	novel	1844	12	NA	NA	1035	-7748	at_least_one_novel_splicesite	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAACCATGTCCCTCTGAA	NA	NA	NA	NA	NA	NA	NA	NA	15199764	15203419	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr17_+_15199932_15200519_15200660_15201837_15201940_15202561_15202652_15203150
ENSMUSG00000116957.2_0	chr16	+	1199	2	FSM	ENSMUSG00000116957.2	ENSMUST00000231549.2	1207	2	0	8	0	-8	multi-exon	TRUE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATATAATAAATAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	32369028	32372518	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_32369240_32371530
ENSMUSG00000116988.2_0	chr17	-	1782	9	FSM	ENSMUSG00000095687.3	ENSMUST00000097420.7	1793	9	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTGGCTAGTGCGCAG	NA	NA	NA	NA	NA	NA	NA	NA	8366918	8346907	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_8347719_8349056_8349132_8350874_8350921_8353735_8353850_8356719_8356791_8360427_8360486_8361349_8361403_8364373_8364435_8366425
ENSMUSG00000116989.2_0	chr16	+	487	3	FSM	ENSMUSG00000116989.2	ENSMUST00000231361.2	498	3	7	4	7	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCAGTCAGGGGCGTCTG	NA	NA	NA	NA	NA	NA	NA	NA	90146311	90159464	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_90146525_90147565_90147771_90159395
ENSMUSG00000117003.2_0	chr17	+	2730	1	FSM	ENSMUSG00000117003.2	ENSMUST00000233518.2	2746	1	13	3	13	-3	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAAGTGCGTGCTTTGACT	NA	NA	NA	NA	NA	NA	NA	NA	66756861	66759591	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_66756900_66759600
ENSMUSG00000117007.2_0	chr17	+	1211	3	FSM	ENSMUSG00000117007.2	ENSMUST00000233185.2	1247	3	23	13	23	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTTAAGCAAACCTGCAG	NA	NA	NA	NA	NA	NA	NA	NA	29272332	29278716	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_29272589_29275356_29275414_29277818
ENSMUSG00000117042.2_0	chr17	-	4433	6	FSM	ENSMUSG00000117042.2	ENSMUST00000137459.8	4453	6	15	5	15	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAAGACCGTTTCTCGTTG	NA	NA	NA	NA	NA	NA	NA	NA	13789111	13707287	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_13711102_13716878_13717048_13760543_13760684_13768557_13768696_13774274_13774355_13789019
ENSMUSG00000117042.2_1	chr17	-	4342	5	ISM	ENSMUSG00000117042.2	ENSMUST00000137459.8	4453	6	14774	2	14774	-2	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGACCGTTTCTCGTTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	13774352	13707284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_13711102_13716878_13717048_13760543_13760684_13768557_13768696_13774274
ENSMUSG00000117098.2_1	chr17	-	604	4	FSM	ENSMUSG00000117098.2	ENSMUST00000233417.2	636	4	17	15	14	-15	multi-exon	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGATGACTGAAGAGCT	NA	NA	NA	NA	NA	NA	NA	NA	71309186	71281332	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_71281492_71303104_71303267_71303691_71303891_71309102
ENSMUSG00000117123.2_0	chr4	-	1076	3	FSM	ENSMUSG00000117123.2	ENSMUST00000233522.2	1087	3	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATGGGTGTCACTTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	88856747	88828091	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_88828948_88846169_88846276_88856633
ENSMUSG00000117148.2_0	chr17	+	9476	2	FSM	ENSMUSG00000117148.2	ENSMUST00000233712.2	9510	2	34	0	34	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGCCTGCATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	21031913	21043889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21032104_21034603
ENSMUSG00000117148.2_1	chr17	+	9435	2	FSM	ENSMUSG00000117148.2	ENSMUST00000232852.2	9451	2	16	0	16	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTGCCTGCATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	21031895	21043889	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_21032045_21034603
ENSMUSG00000117183.2_4	chr17	-	666	2	FSM	ENSMUSG00000117183.2	ENST00000377073.4	688	2	13	9	13	-9	multi-exon	TRUE	canonical	NA	NA	NA	NA	1536	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAACCTTACAAATGTA	NA	NA	NA	NA	NA	NA	NA	NA	22934291	22933288	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22933520_22933856
ENSMUSG00000117187.2_0	chr17	-	348	1	FSM	ENSMUSG00000117187.2	ENSMUST00000233026.2	355	1	5	2	5	-2	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAGGGCCTAGGCCTACC	NA	NA	NA	NA	NA	NA	NA	NA	74745629	74745281	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_74745300_74745600
ENSMUSG00000117251.2_0	chr4	-	1299	2	FSM	ENSMUSG00000117251.2	ENSMUST00000232991.2	1332	2	33	0	33	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTTTTTAGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	88957396	88913354	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_88914516_88957258
ENSMUSG00000117278.2_0	chr17	+	3071	1	FSM	ENSMUSG00000117278.2	ENSMUST00000233737.2	3095	1	16	8	16	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATATTTTTCTGGG	NA	NA	NA	NA	NA	NA	NA	NA	13551025	13554096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_13551000_13554100
ENSMUSG00000117284.2_1	chr17	-	3448	6	FSM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	15	11	15	-11	multi-exon	FALSE	canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTGAACTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	22533803	22504862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217_22532302_22533727
ENSMUSG00000117284.2_5	chr17	-	3368	5	ISM	ENSMUSG00000117284.2	ENSMUST00000233465.2	3474	6	1521	11	1521	-11	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAGTTGAACTTGGCTGT	NA	NA	NA	NA	NA	NA	NA	NA	22532297	22504862	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_22507883_22508749_22508877_22511388_22511437_22528485_22528579_22532217
ENSMUSG00000117292.2_1	chr17	+	2060	4	FSM	ENSMUSG00000117292.2	ENSMUST00000232950.2	2078	4	11	7	11	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACTTGATAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	73557991	73561132	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73559698_73559863_73560020_73560762_73560918_73561089
ENSMUSG00000117292.2_2	chr17	+	2790	4	FSM	ENSMUSG00000117292.2	ENSMUST00000233479.2	2794	4	4	0	4	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGATTTTTGCCAGAG	NA	NA	NA	NA	NA	NA	NA	NA	73559543	73567651	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_73559698_73561089_73561231_73562151_73562331_73565335
ENSMUSG00000117310.3_0	chr1	-	4119	6	FSM	ENSMUSG00000117310.3	ENSMUST00000027232.15	4129	6	3	7	3	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	1661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTGTCTGAGTGTTTCT	NA	NA	NA	NA	NA	NA	NA	NA	30988833	30979390	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985721_30988629
ENSMUSG00000117310.3_2	chr1	-	2834	6	FSM	ENSMUSG00000117310.3	ENSMUST00000076587.6	2851	6	5	12	3	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTGAAATGTTTCCT	NA	NA	NA	NA	NA	NA	NA	NA	30988833	30980672	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr1_-_30982405_30983012_30983088_30983616_30983748_30984018_30984112_30985118_30985718_30988629
ENSMUSG00000117322.2_0	chr17	+	1619	2	FSM	ENSMUSG00000117322.2	ENSMUST00000233076.2	1624	2	2	3	2	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATCACAGTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	23769774	23784262	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_23769875_23782743
ENSMUSG00000117338.2_2	chr17	-	614	6	FSM	ENSMUSG00000052146.17	ENST00000644393.1	623	6	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACTTTAAAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	27854215	27849416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27849537_27850173_27850230_27851252_27851331_27853045_27853218_27853299_27853450_27854177
ENSMUSG00000117338.2_4	chr17	-	569	5	ISM	ENSMUSG00000052146.17	ENST00000644393.1	623	6	773	9	7	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAACTTTAAAGAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	27853442	27849416	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_27849537_27850173_27850230_27851252_27851331_27853045_27853218_27853299
ENSMUSG00000117508.2_0	chr18	+	1288	5	FSM	ENSMUSG00000117508.2	ENSMUST00000234953.2	1317	5	20	9	20	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAACAATTTGAGTCTAA	NA	NA	NA	NA	NA	NA	NA	NA	5945202	5965956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_5945263_5945884_5945988_5947376_5947487_5948244_5948479_5965175
ENSMUSG00000117508.2_2	chr18	+	1219	4	ISM	ENSMUSG00000117508.2	ENSMUST00000234953.2	1317	5	701	19	701	-19	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAATAAACTATTCAACAAT	NA	NA	NA	NA	NA	NA	NA	NA	5945883	5965946	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_5945988_5947376_5947487_5948244_5948479_5965175
ENSMUSG00000117545.2_0	chr17	-	1503	3	FSM	ENSMUSG00000117545.2	ENSMUST00000234806.2	1522	3	10	9	10	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGTGATCCGCTATCTT	NA	NA	NA	NA	NA	NA	NA	NA	87767782	87762405	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_87763294_87764379_87764499_87767286
ENSMUSG00000117571.2_0	chr17	+	1770	6	FSM	ENSMUSG00000117571.2	ENSMUST00000234076.2	1789	6	1	18	1	-18	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAGAAAAAAGAGAACAG	NA	NA	NA	NA	NA	NA	NA	NA	84386088	84397285	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_84386483_84388081_84388180_84392471_84392562_84393332_84394246_84395580_84395720_84397149
ENSMUSG00000117599.2_0	chr18	+	4868	1	FSM	ENSMUSG00000117599.2	ENSMUST00000234242.2	4895	1	19	8	19	-8	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACGAATACACAAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46898299	46903167	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_46898300_46903200
ENSMUSG00000117634.2_0	chr18	-	2338	1	FSM	ENSMUSG00000117634.2	ENSMUST00000235010.2	2365	1	20	7	20	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGATATTTTTGAAGCT	NA	NA	NA	NA	NA	NA	NA	NA	11790821	11788483	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_11788500_11790800
ENSMUSG00000117679.2_0	chr18	-	2047	12	NIC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	8	-6	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36812411	36804212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809531_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ENSMUSG00000117679.2_1	chr18	-	2044	12	NNC	ENSMUSG00000117679.2	novel	2067	13	NA	NA	17	-6	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCACTAGTGATGAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	36812402	36804212	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_-_36804729_36808002_36808195_36808333_36808450_36808715_36808800_36809223_36809309_36809415_36809537_36809917_36810046_36810162_36810310_36810497_36810559_36811446_36811524_36811602_36811767_36812049
ENSMUSG00000117694.2_0	chr18	+	1172	4	FSM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	5	13	5	-13	multi-exon	FALSE	canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATAGGATGTGAGCCAC	NA	NA	NA	NA	NA	NA	NA	NA	35686428	35691356	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35686523_35687479_35687515_35689668_35689745_35690389
ENSMUSG00000117694.2_1	chr18	+	1084	3	ISM	ENSMUSG00000117869.2	ENSMUST00000235679.2	1190	4	1055	8	1055	-8	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATGTGAGCCACTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	35687478	35691361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_35687515_35689668_35689745_35690389
ENSMUSG00000117723.2_0	chr19	+	351	1	FSM	ENSMUSG00000117723.2	ENSMUST00000235939.2	415	1	55	9	55	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACGCATATGGCTGACCT	NA	NA	NA	NA	NA	NA	NA	NA	5059467	5059818	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5059500_5059800
ENSMUSG00000117725.2_0	chr17	+	6267	1	FSM	ENSMUSG00000117725.2	ENSMUST00000235695.2	6295	1	19	9	19	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATAATCTGATTATGT	NA	NA	NA	NA	NA	NA	NA	NA	30795292	30801559	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_30795300_30801600
ENSMUSG00000117732.2_0	chr18	+	1476	6	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	6675	-5	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTTAATTAGACA	NA	NA	NA	NA	NA	NA	NA	NA	77038807	77059096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_+_77038919_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000117732.2_1	chr18	+	5375	6	NNC	ENSMUSG00000025421.16	novel	5477	7	NA	NA	6675	-10	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACTATATATATATATA	NA	NA	NA	NA	NA	NA	NA	NA	77038807	77062993	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr18_+_77038921_77042673_77042883_77044534_77044620_77052746_77052964_77054839_77054904_77058306
ENSMUSG00000117748.2_0	chr8	-	2703	2	FSM	ENSMUSG00000117748.2	ENSMUST00000169312.2	2730	2	27	0	27	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCTCCATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	107620198	107610521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_-_107613159_107620132
ENSMUSG00000117748.2_1	chr8	-	2639	1	NIC	ENSMUSG00000046691.15	novel	2931	4	NA	NA	6687	4	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCGCTCCATTTTGTT	NA	NA	NA	NA	NA	NA	NA	NA	107613160	107610521	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr8_-_107610500_107613200
ENSMUSG00000117760.2_0	chr17	-	465	2	FSM	ENSMUSG00000117760.2	ENSMUST00000237260.2	487	2	2	20	2	-20	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AGTAAAAACAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	31076408	31067429	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31067803_31076316
ENSMUSG00000117775.2_0	chr18	+	2666	1	FSM	ENSMUSG00000117775.2	ENSMUST00000237947.2	2678	1	1	11	1	-11	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGATAAAACTTGTATTT	NA	NA	NA	NA	NA	NA	NA	NA	65767864	65770530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_65767900_65770500
ENSMUSG00000117783.2_0	chr18	+	932	6	FSM	ENSMUSG00000117783.2	ENSMUST00000236106.2	937	6	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAATTAATCTCCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	83373709	83386265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_83373781_83376517_83376795_83381662_83381799_83385018_83385238_83385879_83385988_83386144
ENSMUSG00000117783.2_1	chr18	+	855	5	ISM	ENSMUSG00000117783.2	ENSMUST00000236106.2	937	6	2814	5	2814	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAATTAATCTCCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	83376523	83386265	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_83376795_83381662_83381799_83385018_83385238_83385879_83385988_83386144
ENSMUSG00000117789.2_0	chr19	+	2016	2	FSM	ENSMUSG00000047379.8	ENSMUST00000053705.8	2032	2	9	7	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCACAGCTGGCTCTGT	NA	NA	NA	NA	NA	NA	NA	NA	5088862	5091152	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5090061_5090334
ENSMUSG00000117789.2_1	chr19	+	3561	11	FSM	ENSMUSG00000117789.2	ENSMUST00000236560.2	3572	11	10	1	10	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5088928	5099939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5090061_5090334_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUSG00000117789.2_14	chr19	+	1164	9	FSM	ENSMUSG00000080268.5	ENST00000425825.6	1175	9	9	2	9	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	2231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5095928	5099939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099075_5099521
ENSMUSG00000117789.2_9	chr19	+	1376	10	FSM	ENSMUSG00000080268.5	ENSMUST00000116567.4	1388	10	6	6	6	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTGGTGTGGCTGATGTG	NA	NA	NA	NA	NA	NA	NA	NA	5091387	5099939	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_5091519_5095920_5096067_5096163_5096255_5096421_5096550_5096677_5096758_5096842_5096940_5097419_5097513_5098536_5098602_5099020_5099061_5099434
ENSMUSG00000117798.2_0	chr18	+	2555	2	FSM	ENSMUSG00000117798.2	ENSMUST00000237275.2	2593	2	21	17	21	-17	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTAAAAAAAAAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	67107256	67110219	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_67108076_67108483
ENSMUSG00000117799.2_0	chr17	-	513	2	FSM	ENSMUSG00000117799.2	ENSMUST00000236359.2	515	2	1	1	1	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGGGTGTGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	27270387	27267250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_27267726_27270349
ENSMUSG00000117799.2_1	chr17	-	462	1	ISM	ENSMUSG00000117799.2	ENSMUST00000236359.2	515	2	2676	1	2676	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTATGGGTGTGGTGACA	NA	NA	NA	NA	NA	NA	NA	NA	27267712	27267250	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_27267200_27267700
ENSMUSG00000117818.2_0	chr17	-	2706	1	FSM	ENSMUSG00000117818.2	ENSMUST00000235158.2	2711	1	5	0	5	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGCTGTTCTGTCTGCT	NA	NA	NA	NA	NA	NA	NA	NA	31771226	31768520	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_-_31768500_31771200
ENSMUSG00000117819.2_0	chr17	+	2775	2	FSM	ENSMUSG00000079605.6	ENSMUST00000120016.3	2796	2	9	12	9	-12	multi-exon	FALSE	canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTAAACTGACAGTAGAC	NA	NA	NA	NA	NA	NA	NA	NA	27192149	27195165	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_27192289_27192529
ENSMUSG00000117822.2_0	chr19	+	1378	1	FSM	ENSMUSG00000117822.2	ENSMUST00000236146.2	1387	1	0	9	0	-9	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCTAAATGAGTATTACC	NA	NA	NA	NA	NA	NA	NA	NA	17903986	17905364	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_17904000_17905400
ENSMUSG00000117873.2_3	chr19	+	631	3	FSM	ENSMUSG00000024854.5	ENSMUST00000235306.2	645	3	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTGAGATTCTGACCTT	NA	NA	NA	NA	NA	NA	NA	NA	4282498	4283678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_4282607_4282801_4282914_4283267
ENSMUSG00000117874.2_0	chr18	-	626	3	FSM	ENSMUSG00000024352.13	ENST00000509959.5	638	3	10	2	10	-2	multi-exon	FALSE	canonical	NA	NA	NA	NA	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGTGTTAGAAATAGTAT	NA	NA	NA	NA	NA	NA	NA	NA	35795198	35793045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35793407_35793496_35793628_35795064
ENSMUSG00000117874.2_3	chr18	-	703	4	FSM	ENSMUSG00000024352.13	ENSMUST00000096573.4	710	4	1	6	1	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCACCTTTTGTTTTATC	NA	NA	NA	NA	NA	NA	NA	NA	35795238	35793074	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_35793407_35793496_35793628_35793844_35793911_35795064
ENSMUSG00000117919.2_0	chr18	+	1193	3	FSM	ENSMUSG00000117919.2	ENSMUST00000236086.2	1208	3	1	14	1	-14	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAATGCCAA	NA	NA	NA	NA	NA	NA	NA	NA	44448774	44461376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_44448950_44451636_44451776_44460497
ENSMUSG00000117942.2_0	chr18	+	2214	8	FSM	ENSMUSG00000117942.2	ENSMUST00000140061.8	2235	8	12	9	12	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACTGTCTTGGCTCCA	NA	NA	NA	NA	NA	NA	NA	NA	36780924	36798961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_36781794_36787145_36787320_36788475_36788731_36789738_36789888_36791026_36791192_36794049_36794160_36798334_36798509_36798643
ENSMUSG00000117975.2_0	chr19	-	3733	2	FSM	ENSMUSG00000117975.2	ENSMUST00000095998.7	3760	2	17	10	15	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATTCTTGTAAGGAG	NA	NA	NA	NA	NA	NA	NA	NA	47907721	47883050	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47886625_47907562
ENSMUSG00000117975.2_2	chr19	-	1846	2	FSM	ENSMUSG00000117975.2	ENST00000337478.3	1857	2	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTAATAGTTTAAGATTTGG	NA	NA	NA	NA	NA	NA	NA	NA	47907725	47884950	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_47886630_47907558
ENSMUSG00000117994.2_0	chr18	+	2179	5	FSM	ENSMUSG00000117994.2	ENSMUST00000115580.3	2187	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	39025518	39104329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_39025624_39025737_39025819_39032861_39032953_39066845_39067018_39102599
ENSMUSG00000117994.2_1	chr18	+	2074	4	ISM	ENSMUSG00000117994.2	ENSMUST00000115580.3	2187	5	227	0	227	0	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTGCTTTTGGTCATGGT	NA	NA	NA	NA	NA	NA	NA	NA	39025737	39104329	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_39025819_39032861_39032953_39066845_39067018_39102599
ENSMUSG00000118012.2_0	chr18	+	1871	2	FSM	ENSMUSG00000118012.2	ENSMUST00000236930.2	1875	2	0	4	0	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGAAGATTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	82712411	82719457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_82712435_82717609
ENSMUSG00000118012.2_1	chr18	+	1837	1	ISM	ENSMUSG00000118012.2	ENSMUST00000236930.2	1875	2	5209	4	5209	-4	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAGGAAGATTATGTG	NA	NA	NA	NA	NA	NA	NA	NA	82717620	82719457	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_82717600_82719500
ENSMUSG00000118057.2_0	chr18	-	3570	4	FSM	ENSMUSG00000118057.2	ENSMUST00000235445.2	3579	4	4	5	4	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCTTAAAGCTATGTATA	NA	NA	NA	NA	NA	NA	NA	NA	82379721	82354379	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_82356178_82356502_82358083_82372002_82372135_82379661
ENSMUSG00000118057.2_1	chr18	-	3506	3	ISM	ENSMUSG00000118057.2	ENSMUST00000235445.2	3579	4	7594	6	7594	-6	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGGCTTAAAGCTATGTAT	NA	NA	NA	NA	NA	NA	NA	NA	82372131	82354380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_82356178_82356502_82358083_82372002
ENSMUSG00000118087.2_0	chr19	-	1755	2	FSM	ENSMUSG00000118087.2	ENSMUST00000235942.2	1764	2	1	8	1	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGTCTCCCTGAAAATG	NA	NA	NA	NA	NA	NA	NA	NA	46294049	46292037	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_46293290_46293546
ENSMUSG00000118100.2_0	chr19	+	563	3	FSM	ENSMUSG00000118100.2	ENSMUST00000235986.2	582	3	16	3	16	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCACCATGTCTGCCTGCAT	NA	NA	NA	NA	NA	NA	NA	NA	9877069	9879918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_9877385_9878231_9878442_9879880
ENSMUSG00000118100.2_1	chr19	+	511	2	ISM	ENSMUSG00000118100.2	ENSMUST00000235986.2	582	3	30	1480	30	-1480	5prime_fragment	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCCAGCCCCAATTAAA	NA	NA	NA	NA	NA	NA	NA	NA	9877083	9878441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_+_9877385_9878231
ENSMUSG00000118106.2_0	chr19	+	2269	1	FSM	ENSMUSG00000118106.2	ENSMUST00000235511.2	2276	1	7	0	7	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTATTAGATATTTT	NA	NA	NA	NA	NA	NA	NA	NA	32463329	32465598	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_32463300_32465600
ENSMUSG00000118125.2_0	chr19	-	2527	5	FSM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	0	5	0	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTGTGATTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5781741	5778120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471_5781624_5781703
ENSMUSG00000118125.2_1	chr19	-	2480	4	ISM	ENSMUSG00000118125.2	ENSMUST00000160852.8	2532	5	127	5	29	-5	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTATTGTGATTGCCTGG	NA	NA	NA	NA	NA	NA	NA	NA	5781614	5778120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_5778897_5779264_5780741_5781268_5781354_5781471
ENSMUSG00000118128.2_0	chr19	+	2698	2	FSM	ENSMUSG00000118128.2	ENSMUST00000235733.2	2705	2	0	7	0	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGGCTAAAAAAGGAATA	NA	NA	NA	NA	NA	NA	NA	NA	52291958	52297083	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_52292074_52294500
ENSMUSG00000118132.2_0	chr19	-	976	1	FSM	ENSMUSG00000118132.2	ENSMUST00000235840.2	995	1	19	0	19	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGGGAGTTCCTGTGGA	NA	NA	NA	NA	NA	NA	NA	NA	4050523	4049547	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_4049500_4050500
ENSMUSG00000118134.2_0	chr18	-	566	4	FSM	ENSMUSG00000118134.2	ENSMUST00000237968.2	580	4	7	7	7	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTATAATTTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	67933006	67909109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_-_67909343_67922421_67922548_67923888_67924020_67932930
ENSMUSG00000118134.2_1	chr18	-	492	3	ISM	ENSMUSG00000118134.2	ENSMUST00000237968.2	580	4	8992	7	8992	-7	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGCTATAATTTGATGTC	NA	NA	NA	NA	NA	NA	NA	NA	67924021	67909109	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_-_67909343_67922421_67922548_67923888
ENSMUSG00000118273.2_0	chr19	+	1338	2	FSM	ENSMUSG00000118273.2	ENSMUST00000235257.2	1340	2	2	0	2	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAAATCCATGAGTGTGT	NA	NA	NA	NA	NA	NA	NA	NA	21969938	21998380	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_+_21970174_21997277
ENSMUSG00000118341.2_0	chr17	-	1280	6	ISM	ENSMUSG00000118341.2	ENSMUST00000235858.2	1528	7	393465	3	393465	-3	3prime_fragment	TRUE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTATATATAATAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	30749340	30678478	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr17_-_30678577_30732529_30732650_30736077_30736298_30743686_30743952_30746275_30746640_30749127
ENSMUSG00000118342.2_0	chr19	-	440	3	FSM	ENSMUSG00000118342.2	ENSMUST00000236886.2	450	3	0	10	0	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATAATAATAAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21290647	21287749	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_21287951_21288078_21288251_21290580
ENSMUSG00000118342.2_1	chr19	-	353	2	ISM	ENSMUSG00000118342.2	ENSMUST00000236886.2	450	3	2413	14	2413	-14	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTTATAATAATAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	21288234	21287753	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr19_-_21287951_21288078
ENSMUSG00000118346.2_0	chr19	-	807	5	FSM	ENSMUSG00000118346.2	ENSMUST00000010249.7	818	5	8	3	8	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAAAATAATATATTACTT	NA	NA	NA	NA	NA	NA	NA	NA	8751823	8749918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8750199_8750391_8750471_8750653_8750789_8750868_8751057_8751698
ENSMUSG00000118346.2_1	chr19	-	641	4	FSM	ENSMUSG00000118346.2	ENST00000533861.5	654	4	8	5	8	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTCTTGTCTCTGTACA	NA	NA	NA	NA	NA	NA	NA	NA	8751803	8749985	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_8750199_8750653_8750789_8750868_8751057_8751698
ENSMUSG00000118365.2_0	chr18	+	540	3	FSM	ENSMUSG00000118365.2	ENSMUST00000235622.2	549	3	5	4	5	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAAAGAGGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	52661737	52710393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_52661819_52696727_52696947_52710153
ENSMUSG00000118365.2_1	chr18	+	461	2	ISM	ENSMUSG00000118365.2	ENSMUST00000235622.2	549	3	34993	4	34993	-4	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGAAAAAGAGGCAGGAAT	NA	NA	NA	NA	NA	NA	NA	NA	52696725	52710393	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr18_+_52696947_52710153
ENSMUSG00000118383.2_0	chr19	-	2678	2	FSM	ENSMUSG00000118383.2	ENSMUST00000236905.2	2697	2	14	5	14	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATCTGGTGTGTCCTGT	NA	NA	NA	NA	NA	NA	NA	NA	9814247	9806267	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_9808776_9814077
ENSMUSG00000118449.2_0	chr12	-	3191	1	FSM	ENSMUSG00000118449.2	ENSMUST00000238375.2	3233	1	42	0	42	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTGCCACTCCCCTCCTT	NA	NA	NA	NA	NA	NA	NA	NA	4642987	4639796	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_4639800_4643000
ENSMUSG00000118467.2_0	chr13	+	1100	2	FSM	ENSMUSG00000118467.2	ENST00000446474.5	1118	2	10	8	10	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	3082	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGATGGGTGCAGCCTG	NA	NA	NA	NA	NA	NA	NA	NA	21601485	21604769	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_+_21602175_21604358
ENSMUSG00000118487.2_0	chr8	+	432	5	NNC	ENSMUSG00000118487.2	novel	433	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAAAAGGGGGAATGGAG	NA	NA	NA	NA	NA	NA	NA	NA	85392073	85395372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_+_85392228_85392392_85392495_85395001_85395069_85395193_85395245_85395314
ENSMUSG00000118491.2_0	chr19	-	2239	13	FSM	ENSMUSG00000118491.2	ENST00000389919.8	2253	13	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1089	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATGGGGCCAAGCAAATG	NA	NA	NA	NA	NA	NA	NA	NA	12772794	12741284	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_12741745_12742644_12742746_12747540_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118491.2_5	chr19	-	5525	11	FSM	ENSMUSG00000024695.17	ENSMUST00000038627.9	5531	11	6	0	6	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCTTGTTTCCTTTTAA	NA	NA	NA	NA	NA	NA	NA	NA	12773484	12744383	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_12747914_12748366_12748467_12752183_12752299_12753358_12753438_12753775_12753827_12754223_12754359_12755305_12755411_12755987_12756025_12756256_12756464_12767623_12767653_12772347
ENSMUSG00000118504.2_0	chr3	+	2500	7	FSM	ENSMUSG00000027942.18	ENSMUST00000160640.8	2510	7	10	0	10	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	3434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGGAAAACACAGAGCA	NA	NA	NA	NA	NA	NA	NA	NA	89960130	89970648	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000118504.2_15	chr3	+	1484	6	FSM	ENSMUSG00000027942.18	ENSMUST00000068798.13	1500	6	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTAAAACCATGGATCAT	NA	NA	NA	NA	NA	NA	NA	NA	89960184	89969740	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000118504.2_20	chr3	+	718	5	FSM	ENSMUSG00000027942.18	ENST00000362076.8	726	5	8	0	8	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCAGCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89960256	89969148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89960427_89963513_89963632_89965791_89965959_89966048_89966108_89968944
ENSMUSG00000118504.2_24	chr3	+	814	6	FSM	ENSMUSG00000027942.18	ENST00000640799.1	823	6	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGTGCAGCCGTGCAGC	NA	NA	NA	NA	NA	NA	NA	NA	89960257	89969148	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89968944
ENSMUSG00000118504.2_8	chr3	+	1398	7	FSM	ENSMUSG00000027942.18	ENSMUST00000162114.8	1411	7	10	3	10	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTAATGAGTTGTTTGGGCT	NA	NA	NA	NA	NA	NA	NA	NA	89960158	89968298	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_89960427_89960814_89960917_89963513_89963632_89963835_89963890_89965791_89965959_89966048_89966108_89967668
ENSMUSG00000118505.2_0	chr3	+	994	4	FSM	ENSMUSG00000118505.2	ENST00000454449.3	1013	4	11	8	11	-8	multi-exon	FALSE	canonical	NA	NA	NA	NA	2168	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGAAAGAAGTGAAGGGGT	NA	NA	NA	NA	NA	NA	NA	NA	87462231	87467873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_87462456_87462655_87462843_87463265_87463378_87467402
ENSMUSG00000118515.2_0	chr4	+	1324	1	FSM	ENSMUSG00000118515.2	ENSMUST00000238945.2	1330	1	5	1	5	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAACACTTGCAATCC	NA	NA	NA	NA	NA	NA	NA	NA	113979240	113980564	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_113979200_113980600
ENSMUSG00000118537.2_0	chr13	-	1580	2	FSM	ENSMUSG00000118537.2	ENSMUST00000133280.2	1609	2	22	7	22	-7	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAAAGTATGTCTGATTTT	NA	NA	NA	NA	NA	NA	NA	NA	104314925	104310236	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr13_-_104311513_104314621
ENSMUSG00000118559.3_0	chr16	+	3955	1	FSM	ENSMUSG00000118559.3	ENSMUST00000239037.2	3972	1	17	0	17	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13572446	13576401	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_13572400_13576400
ENSMUSG00000118623.2_0	chr2	+	2885	25	FSM	ENSMUSG00000118623.2	ENSMUST00000124129.8	2894	25	0	9	0	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGAGGAGCCCAGTCGCCA	NA	NA	NA	NA	NA	NA	NA	NA	120286499	120335245	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_120286588_120287688_120287802_120288523_120288628_120290296_120290378_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120325716_120325729_120325882_120326236_120326345_120326555_120327458_120327496_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000118623.2_1	chr2	+	2871	24	NIC	ENSMUSG00000118623.2	novel	2894	25	NA	NA	0	-11	combination_of_known_splicesites	FALSE	canonical	NA	NA	NA	NA	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGGAGGAGCCCAGTCGC	NA	NA	NA	NA	NA	NA	NA	NA	120286499	120335243	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr2_+_120286588_120287688_120287802_120288523_120288628_120290296_120290378_120311163_120311234_120312590_120312710_120314971_120315106_120315661_120315831_120318554_120318639_120320148_120320235_120321434_120321513_120322274_120322436_120325252_120325423_120325882_120326236_120326345_120326555_120327458_120327496_120332583_120332662_120332867_120332926_120333009_120333075_120333456_120333526_120333613_120333693_120333829_120333947_120334576_120334636_120334953
ENSMUSG00000118642.2_0	chr17	-	712	1	NIC	ENSMUSG00000118642.2	novel	714	4	NA	NA	8	-5	mono-exon_by_intron_retention	FALSE	NA	NA	NA	NA	NA	653	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCCGTGGGCCTCACTAA	NA	NA	NA	NA	NA	NA	NA	NA	40159710	40158998	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr17_-_40159000_40159700
ENSMUSG00000118651.2_0	chr17	+	2486	2	FSM	ENSMUSG00000118651.2	ENSMUST00000239444.2	2504	2	8	10	8	-10	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCAATCAGCCATGAGT	NA	NA	NA	NA	NA	NA	NA	NA	79662135	79665441	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_79662434_79663253
ENSMUSG00000118653.2_0	chr9	+	957	1	FSM	ENSMUSG00000118653.2	ENSMUST00000239472.2	988	1	6	25	6	-25	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGCAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	56344746	56345703	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_56344700_56345700
ENSMUSG00000118661.1_0	chr7	-	3438	25	FSM	ENSMUSG00000118661.1	ENST00000421673.7	3455	25	12	5	12	-5	multi-exon	FALSE	canonical	NA	NA	NA	NA	1060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGTGAAGGGACCTGT	NA	NA	NA	NA	NA	NA	NA	NA	141238354	141229542	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_141229576_141230476_141230621_141230841_141230999_141231664_141231905_141232014_141232201_141232716_141232828_141232912_141233055_141233208_141233361_141233782_141233893_141233994_141234048_141234132_141234383_141234618_141234752_141234846_141234942_141235029_141235192_141235440_141235579_141235673_141235747_141235851_141235957_141236024_141236164_141236259_141236381_141236699_141236823_141236953_141237162_141237324_141237435_141237515_141237607_141237926_141238054_141238119
ENSMUSG00000118662.2_0	chr5	+	2712	18	FSM	ENSMUSG00000118662.2	ENSMUST00000239501.2	2735	18	18	5	18	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTATGATGATGGTGGTG	NA	NA	NA	NA	NA	NA	NA	NA	124736829	124765798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_+_124737020_124737197_124737306_124737769_124737847_124740077_124740274_124741810_124741912_124745798_124745996_124746581_124746706_124748332_124748475_124750706_124750773_124753213_124753349_124754531_124754610_124757093_124757172_124758176_124758289_124761069_124761177_124762380_124762538_124763745_124763872_124763959_124764049_124765169
ENSMUSG00000118663.1_0	chr2	+	2344	8	FSM	ENSMUSG00000118663.1	ENSMUST00000239506.1	2347	8	0	3	0	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAAGGGAGAAGGGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	122461119	122474747	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_122462241_122462999_122463186_122466452_122466612_122469669_122469880_122471036_122471230_122472613_122472745_122473758_122473885_122474529
ENSMUSG00000118664.1_0	chr8	+	2732	10	FSM	ENSMUSG00000118664.1	ENSMUST00000239508.1	2747	10	9	6	9	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	2577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTGACAAAACACGTCAA	NA	NA	NA	NA	NA	NA	NA	NA	39473007	39619361	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr8_+_39473355_39513668_39513839_39530344_39530463_39534775_39534917_39538529_39538671_39564078_39564169_39593682_39593747_39597896_39597972_39610300_39610392_39617866
ENSMUSG00000118665.1_0	chr5	-	4440	13	FSM	ENSMUSG00000118665.1	ENSMUST00000239512.1	4451	13	11	0	11	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAGTTTTGCATTTT	NA	NA	NA	NA	NA	NA	NA	NA	100648482	100589899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr5_-_100592137_100594382_100594586_100598478_100598617_100598764_100598868_100600130_100600203_100600859_100600952_100601798_100601997_100602293_100602368_100607444_100607662_100623547_100623691_100628056_100628181_100632998_100633715_100648359
ENSMUSG00000118667.1_0	chr12	-	11336	7	FSM	ENSMUSG00000118667.1	ENSMUST00000239525.1	11349	7	9	4	9	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	452	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCAGTTGTCCGGTTCGCC	NA	NA	NA	NA	NA	NA	NA	NA	112766268	112738631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_112749216_112749335_112749512_112749782_112749925_112750608_112750711_112751520_112751620_112751742_112751799_112766091
ENSMUSG00000118668.1_1	chr19	-	3131	17	FSM	ENSMUSG00000118668.1	ENSMUST00000239527.1	3140	17	9	0	9	0	multi-exon	FALSE	canonical	NA	NA	NA	NA	1259	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGGATCTGTGGTTTGTG	NA	NA	NA	NA	NA	NA	NA	NA	6817995	6806577	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_6807508_6807682_6807847_6807954_6808115_6808358_6808554_6808641_6808816_6809135_6809230_6809318_6809453_6809623_6809753_6812468_6812634_6814694_6814846_6814947_6815052_6815123_6815205_6815422_6815531_6816619_6816736_6816827_6817047_6817701_6817774_6817860
ENSMUSG00000118669.2_0	chr16	+	4687	19	FSM	ENSMUSG00000118669.2	ENSMUST00000239533.1	4698	19	0	11	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGAAAAGTTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	18166045	18225815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUSG00000118669.2_1	chr16	+	4584	20	FSM	ENSMUSG00000118669.2	ENSMUST00000239534.1	4624	20	29	11	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGAAAAGTTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	18166166	18225815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18166321_18170649_18170702_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18219530_18219549_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUSG00000118669.2_2	chr16	+	4536	18	FSM	ENSMUSG00000118669.2	ENSMUST00000239536.1	4547	18	0	11	0	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACCTGAAAAGTTTGTGAC	NA	NA	NA	NA	NA	NA	NA	NA	18198647	18225815	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18198824_18207024_18207256_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUSG00000118669.2_3	chr16	+	4216	17	FSM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	7	9	7	-9	multi-exon	FALSE	canonical	NA	NA	NA	NA	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACCTGAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18210487	18225812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_+_18210578_18214823_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUSG00000118669.2_4	chr16	+	4124	16	ISM	ENSMUSG00000118669.2	ENSMUST00000239547.1	4232	17	4345	9	4307	-9	3prime_fragment	FALSE	canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATACCTGAAAAGTTTGT	NA	NA	NA	NA	NA	NA	NA	NA	18214825	18225812	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	ISM_chr16_+_18214983_18215161_18215692_18216576_18217077_18217711_18217896_18218405_18218524_18218834_18219004_18220316_18220389_18221357_18221486_18221649_18221801_18222075_18222275_18222377_18222490_18222583_18222672_18222884_18222939_18223209_18223296_18223851_18223972_18224356
ENSMUSG00000118718.1_0	chr11	+	184	1	FSM	ENSMUSG00000118718.1	ENSMUST00000240145.1	191	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCCTCTGGGGAATAAGA	NA	NA	NA	NA	NA	NA	NA	NA	101532573	101532757	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101532600_101532800
ENSMUSG00000118837.1_0	chr11	+	167	1	FSM	ENSMUSG00000118837.1	ENSMUST00000240231.1	191	1	24	0	24	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAATAAGAGTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101549087	101549254	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101549100_101549300
ENSMUSG00000119262.1_0	chr11	+	195	1	FSM	ENSMUSG00000119262.1	ENSMUST00000240253.1	215	1	19	1	19	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCGGTTTATCTTAAAGGG	NA	NA	NA	NA	NA	NA	NA	NA	87334081	87334276	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87334100_87334300
ENSMUSG00000119584.1_0	chr17	+	1832	1	FSM	ENSMUSG00000119584.1	ENSMUST00000240377.1	1849	1	10	7	10	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	408	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAACGGGAGACTGTG	NA	NA	NA	NA	NA	NA	NA	NA	40157253	40159085	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_40157300_40159100
ENSMUSG00000119648.1_0	chr11	+	209	1	FSM	ENSMUSG00000119648.1	ENSMUST00000239687.1	215	1	5	1	5	-1	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAATTTTTTATTGTTTT	NA	NA	NA	NA	NA	NA	NA	NA	87339457	87339666	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87339500_87339700
ENSMUSG00000119761.1_0	chr11	+	184	1	FSM	ENSMUSG00000119761.1	ENSMUST00000239600.1	215	1	25	6	25	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACGCGGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	87362218	87362402	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87362200_87362400
ENSMUSG00000119776.1_0	chr11	+	181	1	FSM	ENSMUSG00000119776.1	ENSMUST00000240535.1	191	1	10	0	10	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGGAGTAAAGTTGGTTT	NA	NA	NA	NA	NA	NA	NA	NA	101518201	101518382	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_101518200_101518400
ENSMUSG00000119892.1_0	chr11	-	165	1	FSM	ENSMUSG00000119892.1	ENSMUST00000240379.1	191	1	26	0	26	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGGGAATAAGAATGGTCA	NA	NA	NA	NA	NA	NA	NA	NA	101536730	101536565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_101536600_101536700
ENSMUSG00002074955.1_0	chr11	+	195	1	FSM	ENSMUSG00000119851.1	ENSMUST00000239650.1	215	1	14	6	14	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACGCGGTTTTATTTT	NA	NA	NA	NA	NA	NA	NA	NA	87353125	87353320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_+_87353100_87353300
ENSMUSG00002075061.1_0	chr11	-	110	1	FSM	ENSMUSG00002075061.1	ENSMUST00020183013.1	117	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAACACATAATACAAA	NA	NA	NA	NA	NA	NA	NA	NA	23576861	23576751	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_23576800_23576900
ENSMUSG00002075925.1_0	chr2	+	244	1	FSM	ENSMUSG00002075925.1	ENSMUST00020182138.1	246	1	2	0	2	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGCTCAAGTACTGGGATT	NA	NA	NA	NA	NA	NA	NA	NA	156702226	156702470	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_156702200_156702500
ENSMUSG00002076083.1_1	chr4	-	1300	8	FSM	ENSMUSG00002076083.1	ENST00000622660.1	1313	8	11	2	11	-2	multi-exon	TRUE	canonical	NA	NA	NA	NA	2059	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCCTACGGGGTGGCCCT	NA	NA	NA	NA	NA	NA	NA	NA	156317252	156314445	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_-_156314720_156314961_156315144_156315370_156315432_156315541_156315631_156316003_156316172_156316258_156316404_156316643_156316858_156317085
ENSMUSG00002076104.1_0	chr17	+	100	1	FSM	ENSMUSG00002076104.1	ENSMUST00020183003.1	107	1	0	7	0	-7	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTATCTGTTGTGTACAAA	NA	NA	NA	NA	NA	NA	NA	NA	95072252	95072352	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr17_+_95072300_95072400
ENSMUSG00002076616.1_0	chr9	+	125	1	FSM	ENSMUSG00002076616.1	ENSMUST00020183641.1	134	1	4	5	4	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGACTGAAAACCGCTTTAG	NA	NA	NA	NA	NA	NA	NA	NA	87082165	87082290	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr9_+_87082200_87082300
ENSMUSG00002076696.1_0	chr18	+	135	1	FSM	ENSMUSG00002076696.1	ENSMUST00020183295.1	141	1	0	6	0	-6	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGCTTACCCAGG	NA	NA	NA	NA	NA	NA	NA	NA	35687544	35687679	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr18_+_35687500_35687700
ENSMUSG00002076870.1_0	chr15	+	136	1	FSM	ENSMUSG00002076870.1	ENSMUST00020183146.1	157	1	16	5	16	-5	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAGAGAGAACCACGGA	NA	NA	NA	NA	NA	NA	NA	NA	102858226	102858362	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr15_+_102858200_102858400
ENSMUSG00002076977.1_0	chr4	+	114	1	FSM	ENSMUSG00002076977.1	ENSMUST00020183496.1	114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGGCGAACTACCCAG	NA	NA	NA	NA	NA	NA	NA	NA	94950886	94951000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr4_+_94950900_94951000
IG_locus_4_1	chr12	-	1111	5	FSM	ENSMUSG00000076614.8	ENST00000390548.6	1128	5	13	4	13	-4	multi-exon	FALSE	canonical	NA	NA	NA	NA	2009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTCCTGTAATGGCATTT	NA	NA	NA	NA	NA	NA	NA	NA	113294061	113290158	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_113290245_113291061_113291193_113292603_113292919_113293039_113293410_113293852
IG_locus_4_13	chr12	-	1379	5	FSM	ENSMUSG00000076617.10	ENST00000637539.2	1393	5	9	5	9	-5	multi-exon	TRUE	canonical	NA	NA	NA	NA	1093	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTAGTGTGGTTGTGGGG	NA	NA	NA	NA	NA	NA	NA	NA	113386318	113382575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_113382689_113384548_113384882_113384988_113385307_113385592_113385925_113386035
IG_locus_4_7	chr12	-	1088	5	FSM	ENSMUSG00000076614.8	ENST00000390555.3	1100	5	11	1	11	-1	multi-exon	FALSE	canonical	NA	NA	NA	NA	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCCTAGGCCACCTCC	NA	NA	NA	NA	NA	NA	NA	NA	113294063	113290171	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_113290245_113291061_113291193_113292603_113292919_113293039_113293398_113293852
PB_novel_00018_111	chr1	+	2923	11	Antisense	novelGene_ENSMUSG00000025935.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AGAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13634921	13660119	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_13636621_13639694_13639855_13640161_13640309_13642028_13642134_13642229_13642298_13646590_13646677_13648323_13648382_13649672_13649791_13649913_13650036_13651246_13651309_13659821
PB_novel_00053_31	chr1	-	3843	6	Antisense	novelGene_ENSMUSG00000103046.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAGAAAAATGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	39036320	39024760	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_-_39026928_39030323_39030456_39033994_39034086_39034324_39034469_39034814_39035024_39035220
PB_novel_00065_23	chr1	+	1547	5	Antisense	novelGene_ENSMUSG00000101104.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTGAAATAGACACAA	NA	NA	NA	NA	NA	NA	NA	NA	44125772	44139156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_44126224_44127002_44127207_44127633_44127688_44130520_44130908_44138705
PB_novel_00067_98	chr1	-	2633	10	Antisense	novelGene_ENSMUSG00000041684.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACAGAGAAGAAAGAC	NA	NA	NA	NA	NA	NA	NA	NA	44183677	44165420	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_-_44166025_44166795_44166929_44167891_44167984_44168419_44168523_44168740_44168837_44176142_44176275_44177730_44177818_44180932_44181033_44182006_44182637_44183021
PB_novel_00072_0	chr1	+	7214	1	Antisense	novelGene_ENSMUSG00000104476.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTACAGAAATATTA	NA	NA	NA	NA	NA	NA	NA	NA	45524995	45532209	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_45525000_45532200
PB_novel_00143_10	chr1	+	5927	4	Antisense	novelGene_ENSMUSG00000026185.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGGAACAAAAAGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	72897090	72913962	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_72901668_72902301_72902424_72903011_72903242_72912964
PB_novel_00180_290	chr1	-	1712	16	Antisense	novelGene_ENSMUSG00000062590.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCTAAATACTGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	86172392	86087728	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_-_86087843_86090383_86090557_86092416_86092569_86097626_86097743_86101278_86101436_86113825_86113862_86116598_86116709_86118729_86118822_86121995_86122087_86124037_86124160_86125958_86126102_86127557_86127635_86130209_86130286_86135673_86135765_86140770_86140826_86172285
PB_novel_00217_0	chr1	+	2548	2	Antisense	novelGene_ENSMUSG00000044768.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACATGAAACACAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	97571629	97582415	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_97574090_97582327
PB_novel_00305_1	chr1	-	1758	2	Antisense	novelGene_ENSMUSG00000055547.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCTAAACAAGGAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	152633916	152631947	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_-_152633309_152633519
PB_novel_00348_5	chr1	+	2370	7	Antisense	novelGene_ENSMUSG00000026577.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGTACCAATAGA	NA	NA	NA	NA	NA	NA	NA	NA	164118956	164134997	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_164119979_164123276_164123499_164125807_164125936_164127112_164127314_164129852_164130289_164134006_164134084_164134713
PB_novel_00427_9	chr1	+	2202	4	Antisense	novelGene_ENSMUSG00000039377.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	184459336	184464738	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr1_+_184460191_184462058_184462240_184462885_184463072_184463757
PB_novel_00440_3	chr1	-	1240	7	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATGAAAGGAAAAAATCAT	NA	NA	NA	NA	NA	NA	NA	NA	191510742	191451461	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr1_-_191451728_191481648_191481770_191488042_191488137_191492082_191492358_191495654_191495782_191508432_191508539_191510491
PB_novel_00468_7	chr10	+	3617	9	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATCATTGGGAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	10564698	10956241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr10_+_10565610_10573789_10573876_10594965_10595897_10608901_10609028_10617177_10617346_10622285_10622538_10658304_10658539_10812072_10812325_10955584
PB_novel_00470_0	chr10	-	3799	1	Antisense	novelGene_ENSMUSG00000078348.5_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTCAGCATAATTTTA	NA	NA	NA	NA	NA	NA	NA	NA	12884927	12881128	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_-_12881100_12884900
PB_novel_00508_0	chr10	+	3332	1	Antisense	novelGene_ENSMUSG00000111080.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	30479190	30482522	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_+_30479200_30482500
PB_novel_00522_0	chr10	+	3005	1	Antisense	novelGene_ENSMUSG00000111045.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	40056652	40059657	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_+_40056700_40059700
PB_novel_00562_0	chr10	-	4150	1	Antisense	novelGene_ENSMUSG00000112255.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAGGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	61410861	61406711	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_-_61406700_61410900
PB_novel_00574_26	chr10	+	3049	6	Antisense	novelGene_ENSMUSG00000020063.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACAAAGAATTCAGATA	NA	NA	NA	NA	NA	NA	NA	NA	63154790	63162567	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_+_63156741_63157524_63158078_63159743_63159930_63160901_63160982_63161814_63161965_63162437
PB_novel_00638_0	chr10	-	1190	4	Antisense	novelGene_ENSMUSG00000015312.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGTAGGGGTAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	80768038	80766000	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_-_80766194_80766281_80766384_80766862_80767084_80767364
PB_novel_00687_267	chr10	-	1636	16	Antisense	novelGene_ENSMUSG00000015889.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTCTAAAATCAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	93320696	93295683	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_-_93295810_93297171_93297291_93300304_93300373_93301807_93301915_93302972_93303023_93304613_93304689_93304907_93305057_93307146_93307228_93307714_93307827_93308759_93308904_93310335_93310440_93310777_93310849_93314306_93314364_93316552_93316647_93318821_93318929_93320524
PB_novel_00693_1	chr10	+	1560	3	Genic_Genomic	ENSMUSG00000112593.2	novel	1056	2	NA	NA	-143504	-353	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	95010604	95159867	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr10_+_95011846_95158453_95158751_95159845
PB_novel_00700_5	chr10	+	2538	7	Fusion	ENSMUSG00000112000.2_ENSMUSG00000019971.11	novel	1860	2	NA	NA	-5161	5656	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAATAAAAGAAC	NA	NA	NA	NA	NA	NA	NA	NA	100408126	100425229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Fusion_chr10_+_100409625_100411580_100411756_100413027_100413224_100414179_100414296_100419777_100419870_100422050_100422171_100424888
PB_novel_00711_34	chr10	-	3881	13	Antisense	novelGene_ENSMUSG00000087819.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATCATGAGTTAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	111334011	111316523	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr10_-_111317178_111321359_111321442_111322500_111322606_111325886_111326029_111326235_111326318_111326868_111326997_111327945_111328019_111328701_111328842_111329156_111329302_111330016_111330155_111330655_111330684_111331183_111331235_111331898
PB_novel_00835_6	chr11	+	1857	4	Antisense	novelGene_ENSMUSG00000078974.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGTCACTGATCAAA	NA	NA	NA	NA	NA	NA	NA	NA	16450529	16458479	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_16451807_16454734_16454839_16456372_16456473_16458103
PB_novel_00883_12	chr11	+	1988	7	Antisense	novelGene_ENSMUSG00000042032.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGCAAGCAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	40570140	40585965	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_40571022_40571482_40571600_40573293_40573484_40575507_40575662_40576053_40576169_40578427_40578622_40585628
PB_novel_00904_4	chr11	-	3598	1	Antisense	novelGene_ENSMUSG00000046311.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACCCTGAATGAGTAA	NA	NA	NA	NA	NA	NA	NA	NA	49109451	49105853	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_-_49105900_49109500
PB_novel_00919_78	chr11	+	1589	10	Antisense	novelGene_ENSMUSG00000020387.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAAAAAAAAAACTA	NA	NA	NA	NA	NA	NA	NA	NA	51711898	51747407	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_51712019_51715764_51716235_51717385_51717501_51719090_51719260_51721241_51721457_51722081_51722240_51726398_51726556_51737430_51737523_51739813_51739879_51747379
PB_novel_00957_0	chr11	-	2127	1	FSM	ENSMUSG00002075890.1	ENSMUST00020181760.1	138	1	-1711	-278	-1711	278	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAACCTAGCGAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	58847657	58845530	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr11_-_58845500_58847700
PB_novel_01009_8	chr11	-	485	3	Antisense	novelGene_ENSMUSG00000060938.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAACAAACAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	68795360	68793094	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_-_68793265_68794000_68794144_68795188
PB_novel_01092_3	chr11	+	760	6	Antisense	novelGene_ENSMUSG00000010392.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGAAAGAAAAGGAAAATAG	NA	NA	NA	NA	NA	NA	NA	NA	76620688	76645303	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_76621060_76625394_76625478_76628207_76628238_76639333_76639407_76641634_76641728_76645193
PB_novel_01260_2	chr11	-	698	2	Antisense	novelGene_ENSMUSG00000034757.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAATTAACACTGTTC	NA	NA	NA	NA	NA	NA	NA	NA	102178708	102176503	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_-_102176543_102178049
PB_novel_01283_6	chr11	+	1468	11	Antisense	novelGene_ENSMUSG00002076211.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTTAAACCTAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106054606	106077994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_106055018_106055256_106055296_106055632_106055788_106058637_106058743_106059132_106059309_106061781_106061903_106061980_106062090_106064077_106064197_106064500_106064607_106075386_106075446_106077926
PB_novel_01283_63	chr11	+	1699	10	Antisense	novelGene_ENSMUSG00002076211.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACTTAAACCTAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	106054210	106077994	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_106055023_106058642_106058743_106059132_106059309_106061781_106061903_106061980_106062090_106064077_106064197_106064500_106064607_106071779_106071810_106075387_106075446_106077926
PB_novel_01296_2	chr11	+	428	3	Antisense	novelGene_ENSMUSG00000040481.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATCACAGCCAATATAG	NA	NA	NA	NA	NA	NA	NA	NA	106933501	106935468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr11_+_106933585_106934457_106934652_106935317
PB_novel_01413_153	chr12	-	6114	20	Antisense	novelGene_ENSMUSG00000061911.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACCATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29972861	29825434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_29825591_29833617_29833673_29834198_29834311_29861369_29861733_29876863_29877830_29882285_29882422_29886348_29886438_29888036_29888142_29892388_29892608_29899242_29899493_29901530_29901770_29904229_29904352_29905211_29905283_29936121_29936183_29943358_29943441_29945087_29945312_29960763_29960856_29964230_29964332_29969888_29970037_29970338
PB_novel_01413_96	chr12	-	6114	20	Antisense	novelGene_ENSMUSG00000061911.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAAAACCATTAAGC	NA	NA	NA	NA	NA	NA	NA	NA	29972861	29825434	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_29825591_29833617_29833673_29834198_29834311_29861369_29861733_29876863_29877830_29882285_29882422_29886348_29886438_29888036_29888142_29892388_29892608_29899242_29899493_29901530_29901770_29904229_29904352_29905211_29905283_29936121_29936183_29943358_29943441_29945087_29945312_29960763_29960856_29964230_29964329_29969885_29970037_29970338
PB_novel_01427_277	chr12	-	5125	25	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACACTGTGAATAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	38683210	38031759	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr12_-_38032010_38134165_38134241_38137569_38137593_38150362_38150516_38164530_38164673_38170604_38170654_38174166_38174242_38177261_38177383_38186539_38186656_38189389_38189493_38189568_38189686_38197501_38197600_38216737_38216773_38223723_38223841_38234894_38234970_38240057_38240133_38264300_38264386_38266015_38266106_38277959_38278122_38379990_38380056_38477401_38477494_38488537_38488732_38652712_38652833_38654098_38654163_38680581
PB_novel_01499_8	chr12	+	2630	9	Antisense	novelGene_ENSMUSG00000034402.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTGATTCTAAAGAAGA	NA	NA	NA	NA	NA	NA	NA	NA	74944339	75201045	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_+_74945228_75023241_75023496_75054371_75054574_75134178_75134608_75160966_75161356_75166692_75166809_75177669_75177797_75184413_75184525_75200931
PB_novel_01518_3	chr12	-	764	5	Antisense	novelGene_ENSMUSG00000048833.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAACAACAGAAGAAAC	NA	NA	NA	NA	NA	NA	NA	NA	80726479	80709241	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_80709352_80713307_80713509_80722621_80722707_80723903_80724039_80726246
PB_novel_01526_4	chr12	-	769	5	Antisense	novelGene_ENSMUSG00000021222.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGGAAGTTCTTTA	NA	NA	NA	NA	NA	NA	NA	NA	83588331	83576765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_83576907_83580638_83580783_83586079_83586254_83586560_83586676_83588136
PB_novel_01541_114	chr12	+	4893	19	NNC	ENSMUSG00000092006.2	novel	571	2	NA	NA	16	31906	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	84964937	84997918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_84967355_84967453_84967628_84968029_84968122_84970633_84970692_84970768_84970900_84972467_84972594_84973007_84973185_84974071_84974185_84974642_84974719_84976891_84977013_84977121_84977265_84978472_84978551_84980925_84981176_84981345_84981525_84981727_84981901_84986936_84987172_84988534_84988730_84990103_84990167_84997826
PB_novel_01549_21	chr12	+	1429	5	Antisense	novelGene_ENSMUSG00000113752.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGCAAATAACTTCTAAGA	NA	NA	NA	NA	NA	NA	NA	NA	85389561	85421568	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_+_85390324_85390998_85391126_85397576_85397650_85401567_85401681_85421214
PB_novel_01560_23	chr12	+	2201	13	NNC	ENSMUSG00000021040.16	novel	2701	4	NA	NA	5996	16551	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCTACAGGAAATTAA	NA	NA	NA	NA	NA	NA	NA	NA	87496677	87515527	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_+_87497487_87497575_87497742_87499353_87499468_87500625_87500727_87502361_87502504_87503623_87503738_87505661_87505729_87506190_87506260_87507175_87507282_87508434_87508537_87508626_87508723_87511314_87511484_87515381
PB_novel_01576_13	chr12	+	2369	11	Antisense	novelGene_ENSMUSG00000021186.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAGAGAAATGACC	NA	NA	NA	NA	NA	NA	NA	NA	101716195	101784723	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_+_101717165_101723516_101723711_101726959_101727087_101728060_101728184_101731414_101731537_101734653_101734773_101737507_101737629_101775976_101776236_101778416_101778467_101780802_101780858_101784493
PB_novel_01592_5	chr12	-	2116	11	NNC	ENSMUSG00000084883.3	novel	4298	6	NA	NA	71142	17227	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAGAAAGAAAAGATGCA	NA	NA	NA	NA	NA	NA	NA	NA	108170250	108152633	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr12_-_108152887_108153441_108153520_108155323_108155454_108159928_108160035_108160598_108160656_108161322_108161500_108161843_108162109_108162595_108162630_108165565_108165641_108168332_108168849_108169825
PB_novel_01603_88	chr12	-	2309	12	Antisense	novelGene_ENSMUSG00000017843.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	110538122	110452229	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_110452385_110488922_110489124_110510507_110510618_110512026_110512120_110512202_110512334_110517493_110517554_110519216_110519325_110521273_110521331_110527731_110527896_110534154_110534290_110535387_110535490_110537129
PB_novel_01608_0	chr12	-	880	1	FSM	ENSMUSG00000091498.5	ENSMUST00000181662.2	330	1	-58	-492	-58	492	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	110825386	110824506	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr12_-_110824500_110825400
PB_novel_01618_4	chr12	+	290	2	Antisense	novelGene_ENSMUSG00000021290.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACATCTGAAATAGAAATG	NA	NA	NA	NA	NA	NA	NA	NA	111927808	111929781	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_+_111927984_111929666
PB_novel_01634_1	chr12	-	497	3	Antisense	novelGene_ENSMUSG00000048004.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAAAAGAGGATCATCTA	NA	NA	NA	NA	NA	NA	NA	NA	119982431	119978499	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr12_-_119978738_119979869_119979940_119982242
PB_novel_01734_4	chr13	+	4609	7	Antisense	novelGene_ENSMUSG00000021365.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATATAAAGAGGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	41463388	41512699	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_41465647_41467841_41467935_41469252_41470490_41471335_41471437_41471916_41472024_41492054_41492497_41512328
PB_novel_01739_14	chr13	+	705	6	Antisense	novelGene_ENSMUSG00000057531.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	45076632	45147215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_45076767_45084466_45084628_45123493_45123655_45136216_45136350_45139510_45139570_45147158
PB_novel_01739_6	chr13	+	756	7	Antisense	novelGene_ENSMUSG00000057531.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAGAAAGAAAGAAATATAAA	NA	NA	NA	NA	NA	NA	NA	NA	45076632	45147215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_45076767_45084466_45084628_45123493_45123655_45136216_45136350_45139510_45139569_45145491_45145545_45147159
PB_novel_01790_0	chr13	-	2296	1	Antisense	novelGene_ENSMUSG00000114104.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	63423726	63421430	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_-_63421400_63423700
PB_novel_01832_1	chr13	+	3204	3	Antisense	novelGene_ENSMUSG00000069171.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATAGGAAAAAAATAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	78337091	78347873	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_78338133_78343280_78343809_78346238
PB_novel_01852_38	chr13	+	3019	15	Antisense	novelGene_ENSMUSG00000042167.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGGCGGAA	NA	NA	NA	NA	NA	NA	NA	NA	93282789	93328831	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_93284174_93285388_93285469_93287191_93287284_93291432_93291569_93296151_93296197_93304433_93304563_93304898_93304976_93308330_93308401_93311147_93311211_93312022_93312119_93312205_93312321_93320586_93320824_93322314_93322406_93322810_93322987_93328603
PB_novel_01854_0	chr13	+	707	4	Antisense	novelGene_ENSMUSG00000042118.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATACTAGAAGATAGCAC	NA	NA	NA	NA	NA	NA	NA	NA	93793499	93800323	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_93793652_93798808_93799038_93799652_93799839_93800183
PB_novel_01887_25	chr13	+	6318	10	Antisense	novelGene_ENSMUSG00000032621.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	103875855	103901078	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_+_103880224_103881291_103881438_103885266_103885362_103888900_103889210_103889531_103889652_103894692_103894809_103895676_103895808_103896923_103897103_103897537_103897703_103900389
PB_novel_01900_2	chr13	-	1875	2	Antisense	novelGene_ENSMUSG00000071180.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTAGAAAAGAAGACAATC	NA	NA	NA	NA	NA	NA	NA	NA	108185706	108182960	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr13_-_108183100_108183970
PB_novel_01969_49	chr14	+	4366	21	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACAGAGGCACCTTGA	NA	NA	NA	NA	NA	NA	NA	NA	26134327	26254884	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr14_+_26136146_26139269_26139403_26143575_26143748_26147719_26147836_26148387_26148713_26149398_26149472_26150942_26151066_26159833_26159894_26160102_26160184_26163729_26163790_26174692_26174754_26181191_26181368_26183417_26183554_26184730_26184872_26186355_26186430_26186724_26186818_26189636_26189699_26191516_26191556_26195053_26195127_26203973_26204122_26254482
PB_novel_01971_2	chr14	+	7648	3	Antisense	novelGene_ENSMUSG00000098751.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGCGAAGAGTGAAGGA	NA	NA	NA	NA	NA	NA	NA	NA	26381112	26390961	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_+_26387121_26387530_26387614_26389404
PB_novel_02018_3	chr14	-	477	4	Antisense	novelGene_ENSMUSG00000037628.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGATAAGGCAAGTAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47008944	47002450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_-_47002495_47004629_47004871_47007288_47007392_47008855
PB_novel_02023_4	chr14	-	4518	3	Genic_Genomic	ENSMUSG00000115728.2	novel	647	1	NA	NA	-2150	11845	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	47560663	47546021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr14_-_47546044_47547869_47548571_47556868
PB_novel_02049_8	chr14	+	888	7	Antisense	novelGene_ENSMUSG00000022177.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGCTTACCGCACACTT	NA	NA	NA	NA	NA	NA	NA	NA	54779527	54787476	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_+_54779714_54779838_54779908_54781234_54781364_54781658_54781808_54783182_54783279_54787124_54787257_54787349
PB_novel_02088_0	chr14	-	248	2	Antisense	novelGene_ENSMUSG00000021993.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACCCTAAAAGTACA	NA	NA	NA	NA	NA	NA	NA	NA	61025685	61024752	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_-_61024917_61025601
PB_novel_02101_32	chr14	+	1685	9	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGGAGGGAAAAGAAGG	NA	NA	NA	NA	NA	NA	NA	NA	65060630	65134572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr14_+_65061147_65062746_65062822_65063051_65063142_65064220_65064319_65066036_65066120_65089335_65089491_65098967_65099075_65125022_65125109_65134097
PB_novel_02108_27	chr14	+	706	6	Antisense	novelGene_ENSMUSG00000022039.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAAAATAAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	66291233	66306705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_+_66291365_66293911_66293999_66295016_66295184_66296197_66296272_66305950_66306117_66306624
PB_novel_02108_4	chr14	+	704	6	Antisense	novelGene_ENSMUSG00000022039.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACACAAAAATAAAATGCA	NA	NA	NA	NA	NA	NA	NA	NA	66291233	66306705	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_+_66291368_66293916_66293999_66295016_66295184_66296197_66296272_66305950_66306117_66306624
PB_novel_02127_5	chr14	+	5259	10	Antisense	novelGene_ENSMUSG00000022075.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAGAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	70022438	70043021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_+_70025185_70025306_70025415_70026082_70026172_70031354_70031500_70033342_70033470_70033724_70034745_70035591_70035776_70037128_70037229_70038064_70038267_70042483
PB_novel_02156_24	chr14	-	2069	11	Antisense	novelGene_ENSMUSG00000115184.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTACCTGTTAAATAAA	NA	NA	NA	NA	NA	NA	NA	NA	87749207	87694477	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_-_87694553_87696194_87696257_87709509_87709671_87712132_87712277_87714825_87714895_87718166_87718318_87722992_87723135_87723626_87723779_87724592_87724734_87743197_87744041_87749078
PB_novel_02180_1	chr14	-	4690	2	Antisense	novelGene_ENSMUSG00000085133.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	121491383	121486142	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr14_-_121486386_121486936
PB_novel_02245_0	chr15	+	148	1	Antisense	novelGene_ENSMUSG00000022292.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATCTGGAAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	37927487	37927635	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr15_+_37927500_37927600
PB_novel_02262_43	chr15	+	3207	6	Antisense	novelGene_ENSMUSG00000022340.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACACATCTAATC	NA	NA	NA	NA	NA	NA	NA	NA	44535250	44610399	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr15_+_44537044_44538760_44538912_44540930_44541135_44546743_44546843_44582179_44582382_44609641
PB_novel_02287_8	chr15	+	585	7	Antisense	novelGene_ENSMUSG00000050891.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACATGTCTAGCAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58776576	58793256	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr15_+_58776710_58777589_58777661_58781421_58781497_58787998_58788044_58788127_58788212_58792988_58793032_58793122
PB_novel_02424_0	chr15	-	436	1	NIC	ENSMUSG00000033228.9	novel	566	2	NA	NA	5711	-13	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTAATCAAAATAATGAAT	NA	NA	NA	NA	NA	NA	NA	NA	96336233	96335797	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NIC_chr15_-_96335800_96336200
PB_novel_02495_2	chr16	+	1832	3	Antisense	novelGene_ENSMUSG00000039568.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	409	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	4692641	4698160	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_+_4693736_4694227_4694286_4697480
PB_novel_02514_1	chr16	-	456	4	Antisense	novelGene_ENSMUSG00000068617.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAATACTAAAAGACACAAT	NA	NA	NA	NA	NA	NA	NA	NA	14742046	14735512	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_14735612_14738158_14738309_14738642_14738748_14741944
PB_novel_02547_0	chr16	+	969	1	Antisense	novelGene_ENSMUSG00000061361.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGTGACCTGAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	19348725	19349694	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_+_19348700_19349700
PB_novel_02549_2	chr16	-	995	1	FSM	ENSMUSG00000084838.4	ENSMUST00000117664.2	286	1	-116	-593	-116	593	mono-exon	FALSE	NA	NA	NA	NA	NA	834	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GTTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	19995878	19994883	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr16_-_19994900_19995900
PB_novel_02559_2	chr16	-	675	5	Antisense	novelGene_ENSMUSG00000021018.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAACTGTT	NA	NA	NA	NA	NA	NA	NA	NA	20541015	20536859	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_20536916_20537572_20537656_20537738_20537833_20539266_20539353_20540659
PB_novel_02569_4	chr16	-	1080	5	Antisense	novelGene_ENSMUSG00000022885.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCATCTGAAATACAA	NA	NA	NA	NA	NA	NA	NA	NA	23176960	23136322	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_23136447_23147089_23147185_23173610_23173712_23174955_23175130_23176374
PB_novel_02610_10	chr16	-	3589	10	Antisense	novelGene_ENSMUSG00000065188.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACAAATGGCTCCAAG	NA	NA	NA	NA	NA	NA	NA	NA	37827391	37767937	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_37768182_37768576_37768712_37799018_37799148_37799361_37799478_37807827_37807953_37808877_37808974_37812359_37812597_37818236_37818398_37824876_37826946_37827114
PB_novel_02645_1	chr16	+	1232	9	NNC	ENSMUSG00000022752.10	novel	5964	12	NA	NA	34962	9507	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGCTGGGGAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	56977027	56986575	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr16_+_56977530_56977846_56977902_56979779_56979882_56980431_56980508_56981491_56981568_56982053_56982148_56983880_56983969_56984559_56984686_56986462
PB_novel_02646_92	chr16	+	1873	17	Genic_Genomic	ENSMUSG00000097876.2	novel	1726	4	NA	NA	2938	44009	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	56990701	57038785	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr16_+_56990801_56991982_56992185_56993390_56993523_56998294_56998383_57001853_57001900_57003213_57003353_57004741_57004850_57007000_57007046_57009626_57009796_57011836_57011929_57012970_57013094_57018642_57018747_57019081_57019136_57019223_57019353_57028570_57028690_57034525_57034632_57038667
PB_novel_02682_50	chr16	-	8715	12	Antisense	novelGene_ENSMUSG00000022961.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGCTGGGGG	NA	NA	NA	NA	NA	NA	NA	NA	91476095	91444411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_91444871_91448515_91448684_91451497_91457467_91458986_91459145_91461078_91461233_91461521_91461709_91467349_91467462_91468235_91468352_91472286_91472434_91474289_91474363_91474474_91474592_91475040
PB_novel_02687_2	chr16	+	2006	3	Antisense	novelGene_ENSMUSG00000022951.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAATAAAAGGGTTTA	NA	NA	NA	NA	NA	NA	NA	NA	92188847	92194327	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_+_92190516_92192752_92192919_92194155
PB_novel_02695_3	chr16	+	860	5	Antisense	novelGene_ENSMUSG00000022940.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCTGA	NA	NA	NA	NA	NA	NA	NA	NA	94165305	94171447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_+_94165647_94166213_94166333_94168419_94168493_94170947_94171054_94171226
PB_novel_02698_75	chr16	-	6044	12	Antisense	novelGene_ENSMUSG00000081692.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAACCAACCAACAA	NA	NA	NA	NA	NA	NA	NA	NA	94495951	94370581	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_-_94371392_94412275_94412361_94460352_94460551_94464625_94464719_94466772_94466962_94469661_94469810_94472159_94472448_94474194_94474341_94478308_94478451_94485892_94486199_94487335_94487461_94492437
PB_novel_02704_2	chr16	+	878	3	Antisense	novelGene_ENSMUSG00000045275.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACATAGTCCACAACCT	NA	NA	NA	NA	NA	NA	NA	NA	95976213	95980120	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr16_+_95976253_95976944_95977472_95979808
PB_novel_02823_0	chr17	+	1689	1	Antisense	novelGene_ENSMUSG00000004865.17_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATCAAAACAAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	28806621	28808310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_+_28806600_28808300
PB_novel_02830_3	chr17	-	1160	2	Antisense	novelGene_ENSMUSG00000023067.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29318565	29316899	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_-_29317810_29318315
PB_novel_02846_0	chr17	+	2695	1	Antisense	novelGene_ENSMUSG00000117818.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAAAAAAAAAAGACT	NA	NA	NA	NA	NA	NA	NA	NA	31768520	31771215	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_+_31768500_31771200
PB_novel_02909_10	chr17	-	2578	3	Antisense	novelGene_ENSMUSG00000036036.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37321524	37314576	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_-_37315794_37316939_37317086_37320309
PB_novel_03014_47	chr17	-	2215	16	Antisense	novelGene_ENSMUSG00000055817.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAACGTAGTCTGCAA	NA	NA	NA	NA	NA	NA	NA	NA	84128112	84015841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr17_-_84015894_84022040_84022137_84045757_84045882_84061279_84061345_84062985_84063104_84070337_84070442_84073934_84074035_84083009_84083200_84089330_84089404_84091703_84091765_84096349_84096471_84099080_84099229_84099968_84100194_84107478_84107564_84111877_84112026_84127607
PB_novel_03135_12	chr18	+	483	2	Antisense	novelGene_ENSMUSG00000032905.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	68	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTATAGGGAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	46867153	46868381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_+_46867577_46868321
PB_novel_03135_9	chr18	+	504	3	Antisense	novelGene_ENSMUSG00000032905.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	269	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTATAGGGAAGAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	46867084	46868381	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_+_46867106_46867153_46867577_46868321
PB_novel_03136_0	chr18	-	299	3	Antisense	novelGene_ENSMUSG00000024480.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCACAAATACCTATGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	46923092	46912264	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_-_46912330_46913730_46913834_46922961
PB_novel_03139_21	chr18	+	1458	2	Antisense	novelGene_ENSMUSG00000019647.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAAAAAAAAATCTC	NA	NA	NA	NA	NA	NA	NA	NA	47381303	47383887	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_+_47382651_47383776
PB_novel_03148_45	chr18	-	4366	13	Antisense	novelGene_ENSMUSG00000073563.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	54088852	53995307	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_-_53995671_54028600_54029025_54035922_54035963_54039667_54039740_54050044_54050193_54051866_54052104_54063138_54063225_54063347_54063433_54065263_54065411_54066520_54066615_54081116_54081227_54081716_54081739_54086314
PB_novel_03171_0	chr18	-	2649	1	Antisense	novelGene_ENSMUSG00000117775.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	65770541	65767892	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_-_65767900_65770500
PB_novel_03172_5	chr18	+	960	3	Antisense	novelGene_ENSMUSG00000024519.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAATATACCC	NA	NA	NA	NA	NA	NA	NA	NA	66074189	66103159	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_+_66074828_66100513_66100627_66102950
PB_novel_03185_1	chr18	+	1196	3	Antisense	novelGene_ENSMUSG00000024512.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTAGATAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	70373498	70377623	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_+_70374385_70375073_70375159_70377398
PB_novel_03215_4	chr18	-	522	7	Antisense	novelGene_ENSMUSG00000024614.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAACTGGAAAGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	90546084	90529409	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr18_-_90529458_90532328_90532369_90535517_90535642_90537228_90537273_90541651_90541754_90542404_90542478_90545993
PB_novel_03226_15	chr19	+	1246	6	Antisense	novelGene_ENSMUSG00000024847.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGGGAGGGAATGAAG	NA	NA	NA	NA	NA	NA	NA	NA	4164463	4171560	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr19_+_4164797_4165080_4165222_4165318_4165494_4165978_4166171_4168086_4168266_4171334
PB_novel_03297_0	chr19	-	574	2	FSM	ENSMUSG00000047787.9	ENST00000537170.1	600	2	10	16	10	-16	multi-exon	FALSE	canonical	NA	NA	NA	NA	2796	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATTTAAAAAAAACAAAAACA	NA	NA	NA	NA	NA	NA	NA	NA	7143236	7082973	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr19_-_7083368_7143056
PB_novel_03349_1	chr19	+	499	7	Antisense	novelGene_ENSMUSG00000024725.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAGAAGGAATAAAAAACGA	NA	NA	NA	NA	NA	NA	NA	NA	18562015	18573765	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr19_+_18562106_18563908_18563990_18567068_18567118_18567761_18567872_18569945_18570005_18571224_18571284_18573714
PB_novel_03426_25	chr19	-	1325	5	Antisense	novelGene_ENSMUSG00000025213.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	45067728	45064631	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr19_-_45064672_45065099_45065652_45066733_45066893_45066996_45067145_45067302
PB_novel_03430_8	chr19	+	639	8	Antisense	novelGene_ENSMUSG00000025221.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAACCAAGACCACAA	NA	NA	NA	NA	NA	NA	NA	NA	45782108	45791863	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr19_+_45782159_45782441_45782505_45782639_45782745_45782920_45783026_45783177_45783252_45783418_45783486_45784017_45784144_45791814
PB_novel_03474_0	chr2	-	1703	10	Antisense	novelGene_ENSMUSG00000026648.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCTGAAAAATAAGTA	NA	NA	NA	NA	NA	NA	NA	NA	3454841	3438031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_3438125_3438709_3438786_3438988_3439128_3441792_3441900_3444693_3444826_3445235_3445291_3448108_3448200_3451315_3451410_3453883_3454290_3454331
PB_novel_03613_0	chr2	+	1946	1	FSM	ENSMUSG00000065578.3	ENSMUST00000083644.3	89	1	-854	-1003	-854	1003	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAACCTC	NA	NA	NA	NA	NA	NA	NA	NA	38742987	38744933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_38743000_38744900
PB_novel_03633_143	chr2	+	2357	13	Antisense	novelGene_ENSMUSG00000026971.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTTTCACTAAGACTA	NA	NA	NA	NA	NA	NA	NA	NA	60435482	60503974	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_+_60435653_60441712_60441831_60446988_60447086_60450556_60450780_60458093_60458513_60458680_60458813_60464922_60465016_60480319_60480413_60483484_60483647_60484981_60485149_60498631_60498884_60499448_60499651_60503745
PB_novel_03701_2	chr2	-	2441	3	Antisense	novelGene_ENSMUSG00000086598.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAATGGCAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84498740	84491714	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_84491944_84496486_84498049_84498090
PB_novel_03733_59	chr2	+	1851	11	Antisense	novelGene_ENSMUSG00000027195.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAATGAA	NA	NA	NA	NA	NA	NA	NA	NA	93863033	93988255	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_+_93864006_93864270_93864422_93874217_93874283_93875701_93875788_93882598_93882632_93895896_93895944_93896753_93896819_93913511_93913620_93945337_93945414_93947774_93947822_93988054
PB_novel_03734_4	chr2	-	3480	4	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAGAAAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	97464351	97298023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr2_-_97298766_97433833_97433884_97459331_97462007_97464338
PB_novel_03735_1	chr2	+	659	2	Antisense	novelGene_ENSMUSG00000075014.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98496891	98497615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_+_98497014_98497078
PB_novel_03735_4	chr2	+	660	2	Antisense	novelGene_ENSMUSG00000075014.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	98496891	98497615	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_+_98497015_98497078
PB_novel_03799_1	chr2	-	523	3	Antisense	novelGene_ENSMUSG00000027287.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGGGGAAAAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120421656	120416034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_120416085_120416638_120416756_120421300
PB_novel_03799_9	chr2	-	381	4	Antisense	novelGene_ENSMUSG00000027287.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGGGGAAAAGAGAGAT	NA	NA	NA	NA	NA	NA	NA	NA	120429823	120416034	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_120416085_120416638_120416754_120427119_120427267_120429754
PB_novel_03930_0	chr2	+	1881	2	Antisense	novelGene_ENSMUSG00000073236.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	153183076	153187713	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_+_153184787_153187542
PB_novel_03969_0	chr2	+	996	1	FSM	ENSMUSG00000062846.8	ENSMUST00000121302.2	477	1	-14	-505	-14	505	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATATAAAGGTTAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	157743441	157744437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr2_+_157743400_157744400
PB_novel_04004_2	chr2	-	2637	2	Antisense	novelGene_ENSMUSG00000017764.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAAAAATAAAAAAGAGC	NA	NA	NA	NA	NA	NA	NA	NA	164668791	164664673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_164665119_164666599
PB_novel_04014_1	chr2	-	722	2	Antisense	novelGene_ENSMUSG00000090397.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAACAAAACAA	NA	NA	NA	NA	NA	NA	NA	NA	166786228	166785469	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr2_-_166785820_166785856
PB_novel_04028_4	chr2	-	2550	7	NNC	ENSMUSG00000087633.2	novel	2146	2	NA	NA	7916	32139	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	172274564	172235584	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr2_-_172235671_172235769_172235924_172258037_172258461_172265516_172265619_172266517_172266601_172268555_172269844_172274150
PB_novel_04029_1	chr2	-	2085	9	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCAGAAGCCTTAGCA	NA	NA	NA	NA	NA	NA	NA	NA	172311828	172282563	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr2_-_172282658_172286564_172286660_172287244_172287339_172288539_172288679_172288951_172289033_172305095_172305209_172308191_172308250_172308346_172308443_172310513
PB_novel_04094_4	chr3	+	720	6	Antisense	novelGene_ENSMUSG00000039795.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCTAAAATTAGAGGAA	NA	NA	NA	NA	NA	NA	NA	NA	10405773	10413607	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_10405957_10406052_10406212_10409862_10409983_10410994_10411087_10411169_10411296_10413567
PB_novel_04142_1	chr3	-	9747	2	Antisense	novelGene_ENSMUSG00000023087.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGCAAGAGAGAGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	51159045	51147676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_51155494_51157115
PB_novel_04182_2	chr3	+	3024	5	NNC	ENSMUSG00000034544.18	novel	1406	10	NA	NA	-9608	-372008	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAGGAGAAGAAAGAA	NA	NA	NA	NA	NA	NA	NA	NA	66879114	66889047	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_+_66881282_66882779_66882864_66883183_66883242_66885516_66885728_66888543
PB_novel_04187_17	chr3	-	1128	12	Antisense	novelGene_ENSMUSG00000027775.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAGCTGCCTAGAAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	67507389	67491986	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_67492029_67492929_67493042_67494631_67494675_67495248_67495318_67497162_67497273_67499902_67500005_67501630_67501740_67502099_67502213_67503501_67503556_67503923_67504079_67505356_67505459_67507272
PB_novel_04225_11	chr3	-	1209	5	NNC	ENSMUSG00000004896.17	novel	1620	7	NA	NA	4586	1271	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CGGAAAAAAAAAAAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	87830979	87828940	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_-_87829354_87829435_87829532_87829692_87829796_87830238_87830370_87830513
PB_novel_04264_41	chr3	-	1328	7	Antisense	novelGene_ENSMUSG00000090005.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89968303	89960233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_89960424_89960811_89960915_89963511_89963632_89963835_89963887_89965788_89965958_89966047_89966108_89967668
PB_novel_04264_47	chr3	-	2399	7	Antisense	novelGene_ENSMUSG00000118506.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89970650	89960233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_89960424_89960811_89960915_89963511_89963632_89963835_89963887_89965788_89965958_89966047_89966108_89968944
PB_novel_04264_69	chr3	-	1444	6	Antisense	novelGene_ENSMUSG00000090005.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	89969749	89960233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_89960424_89960811_89960915_89963511_89963632_89965791_89965958_89966047_89966108_89968944
PB_novel_04320_18	chr3	+	632	6	Genic_Genomic	ENSMUSG00000087610.2	novel	550	2	NA	NA	1514	1586	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACCTAATAAAGACAAA	NA	NA	NA	NA	NA	NA	NA	NA	96485813	96489565	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr3_+_96485904_96487112_96487233_96487337_96487405_96487764_96487823_96488959_96489097_96489405
PB_novel_04334_3	chr3	+	557	4	Antisense	novelGene_ENSMUSG00000038170.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCTGGCAAGGAAACAG	NA	NA	NA	NA	NA	NA	NA	NA	97700461	97749096	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_97700636_97700799_97700924_97731529_97731642_97748949
PB_novel_04348_0	chr3	-	1293	1	Antisense	novelGene_ENSMUSG00000104671.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACCAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	102979808	102978515	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_102978500_102979800
PB_novel_04357_0	chr3	+	6061	1	Antisense	novelGene_ENSMUSG00000105304.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104377961	104384022	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_104378000_104384000
PB_novel_04358_0	chr3	+	2289	1	Antisense	novelGene_ENSMUSG00000104973.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104406613	104408902	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_104406600_104408900
PB_novel_04389_0	chr3	+	2540	1	Antisense	novelGene_ENSMUSG00000045092.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAAGTTACAAAGAAAAG	NA	NA	NA	NA	NA	NA	NA	NA	115504226	115506766	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_115504200_115506800
PB_novel_04408_0	chr3	+	1111	1	FSM	ENSMUSG00000096544.3	ENSMUST00000178993.3	331	1	-102	-678	-102	678	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	124179213	124180324	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr3_+_124179200_124180300
PB_novel_04417_7	chr3	+	573	5	Antisense	novelGene_ENSMUSG00000062006.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACACAGAGCAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	130520479	130523933	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_130520608_130522395_130522503_130522701_130522804_130522879_130522951_130523768
PB_novel_04423_11	chr3	-	630	7	Antisense	novelGene_ENSMUSG00000028013.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCTGTAGTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133083637	133032413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_133032461_133036151_133036272_133053822_133053951_133073582_133073704_133076132_133076226_133079382_133079472_133083605
PB_novel_04423_26	chr3	-	630	7	Antisense	novelGene_ENSMUSG00000028013.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTCTGTAGTTAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	133083637	133032413	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_-_133032461_133036151_133036272_133053822_133053951_133073582_133073709_133076137_133076226_133079382_133079472_133083605
PB_novel_04426_21	chr3	-	1145	9	NNC	ENSMUSG00000028165.10	novel	1363	2	NA	NA	12175	34471	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAACTACAAGTCCA	NA	NA	NA	NA	NA	NA	NA	NA	135116993	135077701	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr3_-_135077776_135078878_135079020_135080031_135080162_135088445_135088621_135096180_135096288_135097858_135098009_135099718_135099829_135100603_135100740_135116871
PB_novel_04440_0	chr3	+	1749	5	Antisense	novelGene_ENSMUSG00000028273.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAACTGCAAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	142008018	142097604	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_142009185_142009705_142009741_142010057_142010231_142058402_142058647_142097473
PB_novel_04440_17	chr3	+	1752	8	Antisense	novelGene_ENSMUSG00000028273.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGCAAAAGAAAATTAG	NA	NA	NA	NA	NA	NA	NA	NA	142008080	142097608	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr3_+_142009185_142009705_142009741_142010057_142010231_142010465_142010483_142017882_142017976_142020166_142020210_142058494_142058647_142097473
PB_novel_04497_22	chr4	-	686	8	Antisense	novelGene_ENSMUSG00000078772.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAGACAAGGCTGAGAA	NA	NA	NA	NA	NA	NA	NA	NA	19606149	19580448	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_19580505_19586772_19586862_19588523_19588684_19599611_19599669_19601354_19601442_19602640_19602672_19605400_19605546_19606088
PB_novel_04537_34	chr4	+	2238	11	Antisense	novelGene_ENSMUSG00000028454.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAAACAGACCCAGGC	NA	NA	NA	NA	NA	NA	NA	NA	43017653	43025023	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_+_43018041_43018149_43018224_43019216_43019436_43019646_43019857_43020269_43020322_43021572_43021793_43022009_43022194_43022605_43022766_43023368_43023496_43023671_43023818_43024564
PB_novel_04581_62	chr4	-	2703	13	Antisense	novelGene_ENSMUSG00000057280.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58373787	58286064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_58286189_58293489_58293619_58296607_58296759_58301599_58301729_58303843_58303985_58333562_58333688_58344148_58344314_58353941_58354205_58355677_58355855_58366795_58366995_58367394_58367587_58368870_58369017_58373025
PB_novel_04581_86	chr4	-	3246	14	Antisense	novelGene_ENSMUSG00000057280.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	58374303	58286064	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_58286189_58293489_58293619_58296607_58296759_58301599_58301729_58303843_58303985_58333562_58333688_58344148_58344319_58353943_58354205_58355677_58355855_58356479_58356506_58366797_58366995_58367394_58367587_58368870_58369017_58373025
PB_novel_04610_34	chr4	+	823	6	Antisense	novelGene_ENSMUSG00000038047.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATAGTAACAGCAGAC	NA	NA	NA	NA	NA	NA	NA	NA	86512987	86523956	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_+_86513107_86513601_86513794_86517495_86517665_86518985_86519037_86522319_86522531_86523875
PB_novel_04755_97	chr4	-	2894	13	NNC	ENSMUSG00000050390.13	novel	5049	7	NA	NA	6405	29798	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACCAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	129113402	129083572	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr4_-_129083864_129090620_129090768_129090903_129091082_129094518_129094647_129099919_129100001_129101731_129101825_129103442_129103580_129104284_129104367_129107733_129107878_129108450_129108547_129109016_129109213_129110470_129110610_129112220
PB_novel_04769_27	chr4	-	550	4	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	209	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGGGGGGAGGAGG	NA	NA	NA	NA	NA	NA	NA	NA	129741744	129733330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_129733470_129736460_129736553_129740251_129740333_129741506
PB_novel_04769_33	chr4	-	3284	5	Antisense	novelGene_ENSMUSG00000028788.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTGGGGGAAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	129743796	129732776	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_129733470_129736460_129736556_129738854_129738984_129740255_129740333_129741506
PB_novel_04777_0	chr4	-	3136	1	Antisense	novelGene_ENSMUSG00000100813.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	131996175	131993039	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_131993000_131996200
PB_novel_04822_19	chr4	-	1208	3	Antisense	novelGene_ENSMUSG00000007872.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	632	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCACT	NA	NA	NA	NA	NA	NA	NA	NA	135872703	135870877	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_135871488_135871602_135871687_135872189
PB_novel_04854_2	chr4	+	862	2	Antisense	novelGene_ENSMUSG00000040616.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATCAGAAAGCAGT	NA	NA	NA	NA	NA	NA	NA	NA	141758916	141765092	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_+_141759401_141764714
PB_novel_04858_22	chr4	-	2318	6	Antisense	novelGene_ENSMUSG00000066026.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ACGAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	144654780	144619668	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr4_-_144620278_144645218_144645363_144645952_144646071_144646404_144646646_144650471_144650600_144653702
PB_novel_04935_0	chr5	-	1859	1	Antisense	novelGene_ENSMUSG00000105528.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14079791	14077932	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_14077900_14079800
PB_novel_04948_77	chr5	-	1688	13	Antisense	novelGene_ENSMUSG00000028932.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAACAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	22008785	21990375	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_21990512_21991644_21991881_22000103_22000139_22000756_22000842_22001529_22001629_22004418_22004552_22004932_22005005_22005539_22005636_22006203_22006369_22007521_22007610_22008065_22008269_22008361_22008458_22008541
PB_novel_04954_0	chr5	-	741	2	Genic_Genomic	ENSMUSG00000106133.2	novel	349	1	NA	NA	-53	512	multi-exon	FALSE	canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	24323715	24322801	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr5_-_24323402_24323574
PB_novel_04961_63	chr5	+	162	3	Antisense	novelGene_ENSMUSG00000028945.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGCAAGACAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	25011999	25012798	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_25012058_25012599_25012650_25012744
PB_novel_04963_6	chr5	+	2570	15	Genic_Genomic	ENSMUSG00000106457.2	novel	4020	1	NA	NA	-21654	22499	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGCACATCGCTGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	25552363	25600536	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr5_+_25552476_25554806_25554939_25556049_25556267_25557228_25557291_25558296_25558404_25559329_25559496_25559631_25559819_25564309_25564414_25564588_25564689_25568440_25568560_25571073_25571200_25577766_25578468_25590642_25590758_25592921_25593094_25600386
PB_novel_05019_4	chr5	-	2201	19	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAACAGAAAATGAATGCAT	NA	NA	NA	NA	NA	NA	NA	NA	37305350	37185825	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr5_-_37185942_37242577_37242840_37257976_37258188_37259106_37259226_37262153_37262303_37262953_37263093_37274783_37274913_37276120_37276251_37278283_37278366_37280620_37280685_37282218_37282320_37284720_37284821_37285346_37285407_37285936_37285999_37291578_37291648_37292897_37292975_37298953_37299164_37300137_37300201_37305292
PB_novel_05019_47	chr5	-	2402	13	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATGAAAATAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	37282641	37185803	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr5_-_37185942_37242577_37242841_37248468_37248963_37257976_37258188_37259106_37259226_37262153_37262303_37262953_37263093_37264599_37264661_37274783_37274913_37276120_37276251_37278283_37278366_37280620_37280685_37282218
PB_novel_05045_15	chr5	-	1655	10	Antisense	novelGene_ENSMUSG00000039191.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAAAATAAATAAG	NA	NA	NA	NA	NA	NA	NA	NA	53811093	53773695	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_53773878_53784722_53784762_53793301_53793399_53799364_53799530_53803209_53803387_53806712_53806851_53807004_53807116_53808679_53808821_53809946_53810103_53810644
PB_novel_05060_1	chr5	+	2329	1	Antisense	novelGene_ENSMUSG00000107050.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	NA	NA	NA	NA	NA	NA	NA	NA	65837347	65839676	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_65837300_65839700
PB_novel_05095_35	chr5	-	1465	11	Antisense	novelGene_ENSMUSG00000029288.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAGTTCTAAGAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	88615988	88603918	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_88603964_88604741_88604812_88607216_88607282_88608559_88608605_88609486_88609601_88611128_88611321_88612265_88612369_88612989_88613048_88613143_88613192_88613562_88613610_88615310
PB_novel_05117_18	chr5	-	1259	4	Antisense	novelGene_ENSMUSG00000029326.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATCCTGGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100216565	100207006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_100207098_100209998_100210133_100211615_100211740_100215655
PB_novel_05117_7	chr5	-	1453	5	Antisense	novelGene_ENSMUSG00000029326.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACATCCTGGAAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	100216565	100207006	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_100207099_100208830_100209027_100210001_100210133_100211615_100211740_100215655
PB_novel_05164_3	chr5	-	335	3	Antisense	novelGene_ENSMUSG00000029521.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTCAGTGATCTAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	111015960	111014140	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_111014290_111014820_111014919_111015872
PB_novel_05167_3	chr5	-	2592	9	Genic_Genomic	ENSMUSG00000104559.2	novel	775	1	NA	NA	-70	52008	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACCACACGGCTGAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	111536225	111483372	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr5_-_111483383_111486142_111486293_111494346_111494446_111495645_111495720_111497354_111497440_111519175_111519259_111528058_111528166_111530850_111530976_111534366
PB_novel_05173_18	chr5	+	4431	19	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	113880504	113910551	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr5_+_113881364_113882603_113882795_113883106_113883259_113883638_113884093_113884684_113884853_113885982_113886060_113886821_113886935_113889262_113889373_113890273_113890332_113890449_113890530_113891658_113891770_113892296_113892432_113893429_113893590_113896202_113896331_113897288_113897336_113899157_113899339_113900887_113900993_113902128_113902261_113909381
PB_novel_05229_6	chr5	-	2914	12	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATACATTGAAACAAAC	NA	NA	NA	NA	NA	NA	NA	NA	122582975	122559791	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr5_-_122559910_122560461_122560742_122566193_122566379_122567546_122567669_122570803_122570912_122571442_122571600_122573580_122573723_122576189_122576309_122577380_122577577_122578146_122578374_122579352_122579499_122581861
PB_novel_05257_45	chr5	+	2452	4	Antisense	novelGene_ENSMUSG00000037979.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	NA	NA	NA	NA	NA	NA	NA	124911481	124939468	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_124913362_124916013_124916049_124916724_124916870_124939076
PB_novel_05280_0	chr5	+	3656	1	Antisense	novelGene_ENSMUSG00000107000.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	134295915	134299571	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_134295900_134299600
PB_novel_05306_0	chr5	+	2330	1	Antisense	novelGene_ENSMUSG00000106190.3_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	137220496	137222826	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_137220500_137222800
PB_novel_05323_54	chr5	-	1837	6	Antisense	novelGene_ENSMUSG00000036968.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	138192180	138185767	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_-_138185981_138188529_138188659_138188752_138188850_138190097_138190220_138190819_138190938_138191022
PB_novel_05345_15	chr5	+	329	3	Antisense	novelGene_ENSMUSG00000045078.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACAAAGTCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	143066707	143073363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_143066832_143071624_143071740_143073273
PB_novel_05345_3	chr5	+	370	3	Antisense	novelGene_ENSMUSG00000045078.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTACAAAGTCTGCAAA	NA	NA	NA	NA	NA	NA	NA	NA	143066717	143073363	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr5_+_143066832_143071624_143071791_143073273
PB_novel_05402_0	chr6	+	2167	2	Antisense	novelGene_ENSMUSG00000048216.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	13835066	13838438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_13837073_13838277
PB_novel_05406_1	chr6	+	1713	4	Antisense	novelGene_ENSMUSG00000029553.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTCCCAGATAACTG	NA	NA	NA	NA	NA	NA	NA	NA	16833866	16845460	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_16835349_16840467_16840544_16844193_16844251_16845362
PB_novel_05414_46	chr6	-	3734	12	Antisense	novelGene_ENSMUSG00000029670.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	21976037	21949638	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_21949791_21950034_21950109_21952127_21952229_21953761_21953826_21965730_21965830_21967625_21967698_21968883_21969002_21969274_21969433_21969907_21970107_21971105_21971305_21971806_21971849_21973581
PB_novel_05450_0	chr6	+	1102	1	FSM	ENSMUSG00000080242.6	ENSMUST00000122373.2	465	1	-101	-536	-101	536	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATGTGAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	37782919	37784021	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_37782900_37784000
PB_novel_05459_200	chr6	+	1224	7	Antisense	novelGene_ENSMUSG00000029922.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATCTGTAAGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	39376165	39387143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_39376371_39376733_39376871_39377328_39377438_39378141_39378359_39381581_39381788_39382667_39382902_39387027
PB_novel_05459_96	chr6	+	796	2	Antisense	novelGene_ENSMUSG00000029922.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	491	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTATCTGTAAGACAAAG	NA	NA	NA	NA	NA	NA	NA	NA	39377684	39387143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_39378359_39387021
PB_novel_05463_0	chr6	-	631	5	Antisense	novelGene_ENSMUSG00000037159.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAATACTTCTCTAAAATAT	NA	NA	NA	NA	NA	NA	NA	NA	40439203	40432016	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_40432183_40433833_40433952_40437937_40438090_40438890_40438998_40439115
PB_novel_05475_3	chr6	+	964	7	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAGAAAAGGGAAAAGATA	NA	NA	NA	NA	NA	NA	NA	NA	43323207	43588320	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr6_+_43323498_43323586_43323837_43400555_43400673_43465814_43465909_43500820_43500891_43536876_43536947_43588247
PB_novel_05515_33	chr6	+	1077	5	Antisense	novelGene_ENSMUSG00000037826.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGACAAATAGAGCAATA	NA	NA	NA	NA	NA	NA	NA	NA	57487639	57502190	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_57487834_57491957_57492102_57492574_57492744_57499733_57499834_57501720
PB_novel_05518_25	chr6	+	4011	17	Genic_Genomic	ENSMUSG00000108075.2	novel	2095	1	NA	NA	-39952	14496	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAAAAGAGCAGAGAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	58910229	58966772	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr6_+_58911051_58911398_58912697_58916280_58916383_58917105_58917302_58921104_58921192_58923024_58923119_58930432_58930521_58931188_58931408_58932200_58932283_58933021_58933160_58933637_58933844_58942045_58942194_58950139_58950183_58951015_58951095_58960871_58961060_58964139_58964318_58966728
PB_novel_05570_12	chr6	-	2052	5	Antisense	novelGene_ENSMUSG00000054226.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGCCTTAAAACAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	85907264	85898411	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_85898493_85901340_85901504_85904221_85904346_85904789_85904965_85905755
PB_novel_05589_0	chr6	+	1933	1	Antisense	novelGene_ENSMUSG00000108268.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAGGCAA	NA	NA	NA	NA	NA	NA	NA	NA	88017504	88019437	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_88017500_88019400
PB_novel_05609_4	chr6	+	270	2	Antisense	novelGene_ENSMUSG00000014551.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACAAATTTCCTGCA	NA	NA	NA	NA	NA	NA	NA	NA	92152010	92155782	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_92152193_92155694
PB_novel_05613_2	chr6	-	883	1	Antisense	novelGene_ENSMUSG00000030031.15_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTCCCCTAAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	95104350	95103467	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_95103500_95104400
PB_novel_05647_0	chr6	+	1934	5	Antisense	novelGene_ENSMUSG00000030315.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAACACAAAGC	NA	NA	NA	NA	NA	NA	NA	NA	114838374	114898678	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_+_114839398_114839716_114839843_114840846_114841040_114867576_114867766_114898275
PB_novel_05655_0	chr6	+	866	1	FSM	ENSMUSG00000101878.2	ENSMUST00000173192.2	387	1	-105	-374	-105	374	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAATAA	NA	NA	NA	NA	NA	NA	NA	NA	116150592	116151458	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr6_+_116150600_116151500
PB_novel_05655_1	chr6	+	754	2	Genic_Genomic	ENSMUSG00000101878.2	novel	387	1	NA	NA	-70	366	multi-exon	FALSE	canonical	NA	NA	NA	NA	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATCCCAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116150627	116151450	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr6_+_116150893_116150961
PB_novel_05721_0	chr6	-	2839	1	Antisense	novelGene_ENSMUSG00000072704.7_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	401	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	NA	NA	NA	NA	NA	NA	NA	NA	133084713	133081874	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_133081900_133084700
PB_novel_05742_40	chr6	-	2571	15	Antisense	novelGene_ENSMUSG00000030235.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAATAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	141515261	141470070	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_141470467_141477177_141477331_141478365_141478509_141484904_141485045_141485788_141485909_141487816_141487963_141490456_141490554_141492399_141492647_141493493_141493660_141500716_141500913_141505465_141505633_141508749_141508935_141510238_141510304_141513177_141513291_141515024
PB_novel_05759_7	chr6	-	1545	5	Antisense	novelGene_ENSMUSG00000039958.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAACAAGTAC	NA	NA	NA	NA	NA	NA	NA	NA	149052669	149043156	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr6_-_149043199_149044099_149044210_149045508_149045937_149048651_149048787_149051839
PB_novel_05812_0	chr7	-	4768	1	Antisense	novelGene_ENSMUSG00000041117.9_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATAAAAAATTTTCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	16731441	16726673	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_16726700_16731400
PB_novel_05823_3	chr7	-	1314	10	NNC	ENSMUSG00000047649.10	novel	2239	3	NA	NA	2957	11177	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAGAGAGAGACAGAG	NA	NA	NA	NA	NA	NA	NA	NA	19090449	19078761	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_19079119_19079527_19079641_19082323_19082540_19084083_19084187_19084614_19084717_19086552_19086625_19088246_19088350_19089024_19089098_19089217_19089285_19090341
PB_novel_05857_0	chr7	-	1723	1	FSM	ENSMUSG00000082016.4	ENSMUST00000117129.2	765	1	-77	-881	-77	881	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AATAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	27170037	27168314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr7_-_27168300_27170000
PB_novel_05896_13	chr7	+	1344	6	NNC	ENSMUSG00000019738.16	novel	819	6	NA	NA	-7817	-1186	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAATAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	29923555	29931624	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_+_29923775_29923899_29923973_29926270_29926463_29927029_29927128_29930552_29930695_29931004
PB_novel_05965_3	chr7	-	1775	4	NNC	ENSMUSG00000057342.16	novel	3548	7	NA	NA	5004	4317	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATCTAAACCA	NA	NA	NA	NA	NA	NA	NA	NA	45359627	45354573	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_45355185_45356027_45356439_45357681_45357894_45359086
PB_novel_05989_0	chr7	-	474	2	Genic_Genomic	ENSMUSG00000099647.2	novel	321	1	NA	NA	-24	245	multi-exon	FALSE	canonical	NA	NA	NA	NA	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	ACTGAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	54062250	54061660	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr7_-_54062012_54062127
PB_novel_06007_0	chr7	-	2582	7	Antisense	novelGene_ENSMUSG00000053091.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTGTGAATGATGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	66364495	66345927	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_66346054_66357786_66358301_66358385_66358475_66359039_66359182_66359904_66360492_66361617_66361795_66363548
PB_novel_06013_0	chr7	-	762	2	Antisense	novelGene_ENSMUSG00000108678.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATCAATCACGCT	NA	NA	NA	NA	NA	NA	NA	NA	73067679	73041097	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_73041243_73067062
PB_novel_06025_0	chr7	+	610	2	Antisense	novelGene_ENSMUSG00000030545.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATGGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79387074	79390031	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_+_79387566_79389912
PB_novel_06029_0	chr7	+	2286	1	Antisense	novelGene_ENSMUSG00000108350.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAGAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	79572309	79574595	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_+_79572300_79574600
PB_novel_06041_5	chr7	-	1204	1	Antisense	novelGene_ENSMUSG00000038797.14_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATCTGAAAGGAAGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	80525892	80524688	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_80524700_80525900
PB_novel_06046_10	chr7	+	468	5	Antisense	novelGene_ENSMUSG00000061787.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGGAAACACAAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	80992480	80994976	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_+_80992601_80993485_80993554_80994063_80994165_80994604_80994756_80994948
PB_novel_06159_0	chr7	-	2466	1	Antisense	novelGene_ENSMUSG00000108456.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	116148599	116146133	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_116146100_116148600
PB_novel_06170_6	chr7	-	538	4	Antisense	novelGene_ENSMUSG00000030917.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	158	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	119719417	119703841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_119704051_119714606_119714783_119715446_119715579_119719396
PB_novel_06170_8	chr7	-	521	3	Antisense	novelGene_ENSMUSG00000030917.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATAATTATTA	NA	NA	NA	NA	NA	NA	NA	NA	119715582	119703841	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr7_-_119704051_119714606_119714783_119715446
PB_novel_06289_6	chr7	-	2217	4	NNC	ENSMUSG00000070348.6	novel	3740	5	NA	NA	9027	14816	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGCCCA	NA	NA	NA	NA	NA	NA	NA	NA	144484486	144468851	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr7_-_144469065_144470162_144470269_144471344_144471416_144482659
PB_novel_06302_18	chr8	+	2314	6	Antisense	novelGene_ENSMUSG00000040028.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAATGAGTTATTAA	NA	NA	NA	NA	NA	NA	NA	NA	4338342	4362616	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_4339923_4345333_4345560_4351682_4351837_4354924_4355030_4361597_4361787_4362556
PB_novel_06322_53	chr8	+	3670	16	Antisense	novelGene_ENSMUSG00000006567.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGCAAGTTTAGATAAGAT	NA	NA	NA	NA	NA	NA	NA	NA	22484666	22518732	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_22484941_22485569_22485685_22487307_22487420_22487498_22487701_22488238_22488382_22490062_22490211_22492725_22492880_22494210_22494392_22496275_22496471_22501520_22501675_22501779_22501909_22502726_22502819_22508064_22508227_22510776_22510944_22512315_22512571_22517545
PB_novel_06342_1	chr8	+	3560	4	Antisense	novelGene_ENSMUSG00000037251.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATGCCTCAAAAGAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	26470630	26479762	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_26473671_26476271_26476557_26477518_26477669_26479677
PB_novel_06357_1	chr8	-	1543	6	Antisense	novelGene_ENSMUSG00000031595.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACAATTTGGGGGAAAA	NA	NA	NA	NA	NA	NA	NA	NA	41443823	41379275	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_-_41379462_41391125_41391423_41429985_41430137_41438567_41438864_41441840_41441979_41443348
PB_novel_06364_12	chr8	+	1379	10	Antisense	novelGene_ENSMUSG00000031645.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACACATTTTACTGAA	NA	NA	NA	NA	NA	NA	NA	NA	45694474	45703188	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_45694649_45695255_45695392_45695900_45695999_45698665_45698841_45699782_45699944_45701590_45701697_45701779_45701944_45702047_45702158_45702541_45702702_45703093
PB_novel_06473_0	chr8	+	1676	3	Antisense	novelGene_ENSMUSG00000063253.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATGGTCTGTAAGAAG	NA	NA	NA	NA	NA	NA	NA	NA	84161136	84164675	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_84162672_84164183_84164263_84164613
PB_novel_06473_2	chr8	+	1530	1	Antisense	novelGene_ENSMUSG00000063253.12_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATCTGTATTCAAAATA	NA	NA	NA	NA	NA	NA	NA	NA	84161133	84162663	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_84161100_84162700
PB_novel_06481_9	chr8	-	2257	5	Antisense	novelGene_ENSMUSG00000079003.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	84727044	84724143	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_-_84725193_84725569_84725867_84725949_84726050_84726144_84726254_84726342
PB_novel_06488_15	chr8	+	2199	9	Genic_Genomic	ENSMUSG00000074203.5	novel	721	2	NA	NA	-14393	47451	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAGAGAAAAACAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	85435242	85500924	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Genic_Genomic_chr8_+_85435309_85440396_85440489_85448273_85448450_85453099_85453232_85453752_85453874_85454233_85454308_85454532_85454597_85498412_85498944_85499981
PB_novel_06489_1	chr8	-	2477	2	NNC	ENSMUSG00000003813.16	novel	2074	9	NA	NA	5158	3112	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAGAGAAACAACAACAA	NA	NA	NA	NA	NA	NA	NA	NA	85562112	85558168	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr8_-_85559268_85560734
PB_novel_06504_2	chr8	+	1849	2	Antisense	novelGene_ENSMUSG00000110386.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	NA	NA	NA	NA	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAATCACCCC	NA	NA	NA	NA	NA	NA	NA	NA	85852499	85858881	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_85853699_85858231
PB_novel_06533_4	chr8	+	4254	8	Antisense	novelGene_ENSMUSG00000031781.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCAAAAGAAACAAGACAGG	NA	NA	NA	NA	NA	NA	NA	NA	95546431	95559330	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_95549838_95550282_95550363_95551846_95551959_95553261_95553341_95554908_95555068_95555781_95555861_95558402_95558554_95559142
PB_novel_06605_7	chr8	+	1973	14	Antisense	novelGene_ENSMUSG00000031948.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAAAAAATTATGAC	NA	NA	NA	NA	NA	NA	NA	NA	112720074	112737920	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_+_112720338_112721494_112721639_112723090_112723218_112724206_112724294_112724921_112725010_112725155_112725327_112725430_112725595_112726701_112726822_112728115_112728241_112728331_112728524_112729146_112729236_112729905_112730073_112732263_112732421_112737841
PB_novel_06630_8	chr8	-	1571	12	Antisense	novelGene_ENSMUSG00000000738.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATACAAAGTGCTACCTA	NA	NA	NA	NA	NA	NA	NA	NA	123824282	123797131	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr8_-_123797203_123800485_123800728_123803584_123803730_123804556_123804660_123806150_123806277_123815681_123815785_123816860_123816971_123818370_123818488_123820327_123820484_123821209_123821378_123821894_123821974_123824131
PB_novel_06654_12	chr9	-	648	3	Antisense	novelGene_ENSMUSG00000096385.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3005194	3003376	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3003698_3004571_3004774_3005069
PB_novel_06654_23	chr9	-	648	4	Antisense	novelGene_ENSMUSG00000096385.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3003905	3000278	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3000415_3001993_3002378_3003484_3003597_3003889
PB_novel_06656_0	chr9	-	640	2	Antisense	novelGene_ENSMUSG00000096385.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAATCATTGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3005189	3004487	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3005013_3005074
PB_novel_06657_1	chr9	-	645	3	Antisense	novelGene_ENSMUSG00000096519.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3014812	3006709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3006846_3014007_3014392_3014687
PB_novel_06657_5	chr9	-	651	3	Antisense	novelGene_ENSMUSG00000096519.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3014578	3006709	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3006846_3014007_3014392_3014447
PB_novel_06665_18	chr9	-	644	2	Antisense	novelGene_ENSMUSG00000095891.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGAAAATCATGGAAA	NA	NA	NA	NA	NA	NA	NA	NA	3026387	3025447	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_3025967_3026262
PB_novel_06697_90	chr9	-	3783	15	Antisense	novelGene_ENSMUSG00000031918.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAATTAGACAAAAAC	NA	NA	NA	NA	NA	NA	NA	NA	13717777	13659712	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_13660695_13693570_13693678_13697146_13697226_13699876_13699971_13700334_13700445_13703272_13703376_13704443_13704527_13706530_13706683_13707253_13707441_13710443_13710630_13711169_13711379_13713210_13713301_13714717_13714833_13716099_13716276_13716667
PB_novel_06703_2	chr9	+	749	6	Antisense	novelGene_ENSMUSG00000031938.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACTAATAAAAGACACAC	NA	NA	NA	NA	NA	NA	NA	NA	15196105	15209233	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_+_15196292_15198653_15198769_15203295_15203473_15205727_15205828_15205979_15206055_15209137
PB_novel_06703_33	chr9	+	656	5	Antisense	novelGene_ENSMUSG00000031938.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACACAAGCCATCTTA	NA	NA	NA	NA	NA	NA	NA	NA	15196105	15206057	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_+_15196292_15198653_15198769_15203295_15203473_15205727_15205828_15205979
PB_novel_06729_109	chr9	-	3590	18	Antisense	novelGene_ENSMUSG00000032178.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	NA	NA	NA	NA	NA	NA	NA	NA	21313099	21279314	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_21279394_21298993_21299093_21299818_21300049_21300600_21300780_21303590_21303737_21305004_21305097_21305488_21305586_21306125_21306236_21306663_21306763_21307313_21307425_21307509_21307622_21308762_21308963_21309262_21309431_21310418_21310545_21310709_21310887_21310978_21311135_21311252_21311310_21311747
PB_novel_06744_12	chr9	-	280	2	Antisense	novelGene_ENSMUSG00000001833.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAATAGAAGAAAAAT	NA	NA	NA	NA	NA	NA	NA	NA	25212834	25188837	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_25188955_25212671
PB_novel_06763_21	chr9	-	4150	7	NNC	ENSMUSG00000087135.8	novel	819	4	NA	NA	-1138	94727	intron_retention	FALSE	non_canonical	NA	NA	NA	NA	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGGAAAAAAAATGAGC	NA	NA	NA	NA	NA	NA	NA	NA	40696615	40597310	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_40597652_40672192_40672354_40682399_40682599_40683653_40683823_40685656_40685782_40692408_40692550_40693601
PB_novel_06824_96	chr9	-	1290	6	NNC	ENSMUSG00000061559.16	novel	3372	11	NA	NA	19575	8669	at_least_one_novel_splicesite	TRUE	non_canonical	NA	NA	NA	NA	712	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTTTGGAGAGAAAGAGA	NA	NA	NA	NA	NA	NA	NA	NA	54622191	54613349	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chr9_-_54613526_54615664_54615770_54616414_54616643_54617783_54618014_54621550_54621659_54621748
PB_novel_06901_6	chr9	+	1091	8	Antisense	novelGene_ENSMUSG00000032218.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCACTGGACACCTTAAA	NA	NA	NA	NA	NA	NA	NA	NA	70315215	70326397	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_+_70315252_70316554_70316673_70317402_70317541_70317933_70318173_70320122_70320285_70320385_70320554_70326074_70326190_70326282
PB_novel_06907_0	chr9	-	1469	1	Antisense	novelGene_ENSMUSG00000104273.2_AS	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAGAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	72595998	72594529	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_-_72594500_72596000
PB_novel_07057_27	chr9	+	7826	15	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGGGAAAAAAAGAAAAAGA	NA	NA	NA	NA	NA	NA	NA	NA	116401813	117081446	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chr9_+_116407771_116411805_116411931_116415079_116415164_116456957_116457006_116465436_116465547_116507713_116507764_116510196_116510298_116524889_116524937_116548385_116548491_116634480_116634561_116651806_116651965_116788535_116788626_116885802_116885861_116939025_116939187_117080794
PB_novel_07078_40	chr9	+	1606	9	Antisense	novelGene_ENSMUSG00000098922.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCTCCTGAAAATTAAAA	NA	NA	NA	NA	NA	NA	NA	NA	122080212	122104722	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chr9_+_122080342_122082001_122082197_122086124_122086305_122087982_122088058_122088600_122088657_122090149_122090720_122092735_122092856_122100264_122100400_122104576
PB_novel_07092_0	chrUn_GL456382v1	-	522	1	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TACTTAGAAAAAAAAAAAAA	NA	NA	NA	NA	NA	NA	NA	NA	14729	14207	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Intergenic_chrUn_GL456382v1_-_14200_14700
PB_novel_07150_2	chrX	-	4154	9	NNC	ENSMUSG00000036551.7	novel	1792	6	NA	NA	18095	23826	at_least_one_novel_splicesite	FALSE	non_canonical	NA	NA	NA	NA	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAACAAACAAAAAAACC	NA	NA	NA	NA	NA	NA	NA	NA	36414400	36390524	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	NNC_chrX_-_36391029_36394630_36394712_36400164_36400234_36400402_36400545_36403328_36403393_36405289_36405401_36405489_36405566_36406557_36406705_36411440
PB_novel_07157_0	chrX	+	424	1	FSM	ENSMUSG00000080896.6	ENSMUST00000117155.2	174	1	-16	-234	-16	234	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATCTGGTAC	NA	NA	NA	NA	NA	NA	NA	NA	38058677	38059101	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chrX_+_38058700_38059100
PB_novel_07173_21	chrX	+	4300	18	Antisense	novelGene_ENSMUSG00000031111.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACGTAGTAGAATCTAAA	NA	NA	NA	NA	NA	NA	NA	NA	48871422	48884269	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chrX_+_48871832_48871978_48872103_48872490_48872770_48872901_48873185_48873380_48873675_48873851_48874137_48874864_48875153_48875735_48876015_48876234_48876526_48876909_48876942_48877023_48877096_48878958_48879082_48879393_48879671_48880163_48880462_48880694_48880975_48882778_48883068_48883367_48883651_48884155
PB_novel_07276_42	chrX	+	5276	18	Antisense	novelGene_ENSMUSG00000079965.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATTTAAAAATAAAA	NA	NA	NA	NA	NA	NA	NA	NA	104841216	104889587	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chrX_+_104844063_104844953_104845083_104845586_104845680_104846290_104846421_104847388_104847542_104861639_104861832_104862947_104863127_104864381_104864489_104867312_104867422_104869706_104869859_104874451_104874627_104874791_104874880_104876051_104876174_104879911_104880034_104881844_104882021_104883446_104883584_104889101_104889278_104889397
PB_novel_07296_2	chrX	+	1410	2	Antisense	novelGene_ENSMUSG00000048007.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	NA	NA	NA	NA	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAGAGTAGCATA	NA	NA	NA	NA	NA	NA	NA	NA	133438004	133442603	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chrX_+_133439016_133442204
PB_novel_07321_32	chrX	+	5014	15	Antisense	novelGene_ENSMUSG00000031278.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAGAGAGAGAG	NA	NA	NA	NA	NA	NA	NA	NA	141101005	141173438	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chrX_+_141103831_141110971_141111130_141111843_141111959_141115187_141115378_141116663_141116741_141121879_141122033_141124326_141124403_141126069_141126194_141126302_141126454_141128423_141128565_141131999_141132108_141133955_141134136_141134376_141134907_141143384_141143433_141173300
PB_novel_07353_3	chrX	-	1686	5	Antisense	novelGene_ENSMUSG00000031367.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	NA	NA	NA	NA	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGCAACATAAACTGCA	NA	NA	NA	NA	NA	NA	NA	NA	162712438	162694345	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	Antisense_chrX_-_162694502_162699468_162699580_162700701_162700838_162711019_162712044_162712179
TR_locus_4_0	chr14	+	393	2	FSM	ENSMUSG00000093966.3	ENSMUST00000103655.3	411	2	15	3	15	-3	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCACAGTGCTCCCAGCAA	NA	NA	NA	NA	NA	NA	NA	NA	53836299	53836864	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_53836417_53836588
TR_locus_4_1	chr14	+	378	3	FSM	ENSMUSG00000076928.6	ENSMUST00000103740.2	413	3	29	6	29	-6	multi-exon	FALSE	canonical	NA	NA	NA	NA	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGTAAGAAGGCATG	NA	NA	NA	NA	NA	NA	NA	NA	54458006	54460548	mouse_simulation_PacBio_cDNA_long	iso_detect_ref_PacBio_cDNA_IsoTools_final	FSM_chr14_+_54458239_54459562_54459608_54460447
